Sample records for coral reef ecosystem

  1. Coral Reef Ecosystems

    NASA Astrophysics Data System (ADS)

    Yap, Helen T.

    Coral reefs are geological structures of significant dimensions, constructed over millions of years by calcifying organisms. The present day reef-builders are hard corals belonging to the order Scleractinia, phylum Cnidaria. The greatest concentrations of coral reefs are in the tropics, with highest levels of biodiversity situated in reefs of the Indo-West Pacific region. These ecosystems have provided coastal protection and livelihood to human populations over the millennia. Human activities have caused destruction of these habitats, the intensity of which has increased alarmingly since the latter decades of the twentieth century. The severity of this impact is directly related to exponential growth rates of human populations especially in the coastal areas of the developing world. However, a more recently recognized phenomenon concerns disturbances brought about by the changing climate, manifested mainly as rising sea surface temperatures, and increasing acidification of ocean waters due to greater drawdown of higher concentrations of atmospheric carbon dioxide. Management efforts have so far not kept pace with the rates of degradation, so that the spatial extent of damaged reefs and the incidences of localized extinction of reef species are increasing year after year. The major management efforts to date consist of establishing marine protected areas and promoting the active restoration of coral habitats.

  2. Attenuating effects of ecosystem management on coral reefs.

    PubMed

    Steneck, Robert S; Mumby, Peter J; MacDonald, Chancey; Rasher, Douglas B; Stoyle, George

    2018-05-01

    Managing diverse ecosystems is challenging because structuring drivers are often processes having diffuse impacts that attenuate from the people who were "managed" to the expected ecosystem-wide outcome. Coral reef fishes targeted for management only indirectly link to the ecosystem's foundation (reef corals). Three successively weakening interaction tiers separate management of fishing from coral abundance. We studied 12 islands along the 700-km eastern Caribbean archipelago, comparing fished and unfished coral reefs. Fishing reduced biomass of carnivorous (snappers and groupers) and herbivorous (parrotfish and surgeonfish) fishes. We document attenuating but important effects of managing fishing, which explained 37% of variance in parrotfish abundance, 20% of variance in harmful algal abundance, and 17% of variance in juvenile coral abundance. The explained variance increased when we quantified herbivory using area-specific bite rates. Local fisheries management resulted in a 62% increase in the archipelago's juvenile coral density, improving the ecosystem's recovery potential from major disturbances.

  3. Quantifying Climatological Ranges and Anomalies for Pacific Coral Reef Ecosystems

    PubMed Central

    Gove, Jamison M.; Williams, Gareth J.; McManus, Margaret A.; Heron, Scott F.; Sandin, Stuart A.; Vetter, Oliver J.; Foley, David G.

    2013-01-01

    Coral reef ecosystems are exposed to a range of environmental forcings that vary on daily to decadal time scales and across spatial scales spanning from reefs to archipelagos. Environmental variability is a major determinant of reef ecosystem structure and function, including coral reef extent and growth rates, and the abundance, diversity, and morphology of reef organisms. Proper characterization of environmental forcings on coral reef ecosystems is critical if we are to understand the dynamics and implications of abiotic–biotic interactions on reef ecosystems. This study combines high-resolution bathymetric information with remotely sensed sea surface temperature, chlorophyll-a and irradiance data, and modeled wave data to quantify environmental forcings on coral reefs. We present a methodological approach to develop spatially constrained, island- and atoll-scale metrics that quantify climatological range limits and anomalous environmental forcings across U.S. Pacific coral reef ecosystems. Our results indicate considerable spatial heterogeneity in climatological ranges and anomalies across 41 islands and atolls, with emergent spatial patterns specific to each environmental forcing. For example, wave energy was greatest at northern latitudes and generally decreased with latitude. In contrast, chlorophyll-a was greatest at reef ecosystems proximate to the equator and northern-most locations, showing little synchrony with latitude. In addition, we find that the reef ecosystems with the highest chlorophyll-a concentrations; Jarvis, Howland, Baker, Palmyra and Kingman are each uninhabited and are characterized by high hard coral cover and large numbers of predatory fishes. Finally, we find that scaling environmental data to the spatial footprint of individual islands and atolls is more likely to capture local environmental forcings, as chlorophyll-a concentrations decreased at relatively short distances (>7 km) from 85% of our study locations. These metrics will

  4. Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems.

    PubMed

    Gove, Jamison M; Williams, Gareth J; McManus, Margaret A; Heron, Scott F; Sandin, Stuart A; Vetter, Oliver J; Foley, David G

    2013-01-01

    Coral reef ecosystems are exposed to a range of environmental forcings that vary on daily to decadal time scales and across spatial scales spanning from reefs to archipelagos. Environmental variability is a major determinant of reef ecosystem structure and function, including coral reef extent and growth rates, and the abundance, diversity, and morphology of reef organisms. Proper characterization of environmental forcings on coral reef ecosystems is critical if we are to understand the dynamics and implications of abiotic-biotic interactions on reef ecosystems. This study combines high-resolution bathymetric information with remotely sensed sea surface temperature, chlorophyll-a and irradiance data, and modeled wave data to quantify environmental forcings on coral reefs. We present a methodological approach to develop spatially constrained, island- and atoll-scale metrics that quantify climatological range limits and anomalous environmental forcings across U.S. Pacific coral reef ecosystems. Our results indicate considerable spatial heterogeneity in climatological ranges and anomalies across 41 islands and atolls, with emergent spatial patterns specific to each environmental forcing. For example, wave energy was greatest at northern latitudes and generally decreased with latitude. In contrast, chlorophyll-a was greatest at reef ecosystems proximate to the equator and northern-most locations, showing little synchrony with latitude. In addition, we find that the reef ecosystems with the highest chlorophyll-a concentrations; Jarvis, Howland, Baker, Palmyra and Kingman are each uninhabited and are characterized by high hard coral cover and large numbers of predatory fishes. Finally, we find that scaling environmental data to the spatial footprint of individual islands and atolls is more likely to capture local environmental forcings, as chlorophyll-a concentrations decreased at relatively short distances (>7 km) from 85% of our study locations. These metrics will help

  5. 78 FR 66683 - Fisheries in the Western Pacific; Special Coral Reef Ecosystem Fishing Permit

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-11-06

    ... the Western Pacific; Special Coral Reef Ecosystem Fishing Permit AGENCY: National Marine Fisheries... special coral reef ecosystem fishing permit. SUMMARY: NMFS issued a Special Coral Reef Ecosystem Fishing Permit that authorizes Kampachi Farms, LLC, to culture and harvest a coral reef ecosystem management unit...

  6. Resetting predator baselines in coral reef ecosystems

    PubMed Central

    Bradley, Darcy; Conklin, Eric; Papastamatiou, Yannis P.; McCauley, Douglas J.; Pollock, Kydd; Pollock, Amanda; Kendall, Bruce E.; Gaines, Steven D.; Caselle, Jennifer E.

    2017-01-01

    What did coral reef ecosystems look like before human impacts became pervasive? Early efforts to reconstruct baselines resulted in the controversial suggestion that pristine coral reefs have inverted trophic pyramids, with disproportionally large top predator biomass. The validity of the coral reef inverted trophic pyramid has been questioned, but until now, was not resolved empirically. We use data from an eight-year tag-recapture program with spatially explicit, capture-recapture models to re-examine the population size and density of a key top predator at Palmyra atoll, the same location that inspired the idea of inverted trophic biomass pyramids in coral reef ecosystems. Given that animal movement is suspected to have significantly biased early biomass estimates of highly mobile top predators, we focused our reassessment on the most mobile and most abundant predator at Palmyra, the grey reef shark (Carcharhinus amblyrhynchos). We estimated a density of 21.3 (95% CI 17.8, 24.7) grey reef sharks/km2, which is an order of magnitude lower than the estimates that suggested an inverted trophic pyramid. Our results indicate that the trophic structure of an unexploited reef fish community is not inverted, and that even healthy top predator populations may be considerably smaller, and more precarious, than previously thought. PMID:28220895

  7. USGS research on Atlantic coral reef ecosystems

    USGS Publications Warehouse

    Kuffner, Ilsa B.; Yates, Kimberly K.; Zawada, David G.; Richey, Julie N.; Kellogg, Christina A.; Toth, Lauren T.

    2015-10-23

    Coral reefs are massive, biomineralized structures that protect coastal communities by acting as barriers to hazards such as hurricanes and tsunamis. They provide sand for beaches through the natural process of erosion, support tourism and recreational industries, and provide essential habitat for fisheries. The continuing global degradation of coral reef ecosystems is well documented. There is a need for focused, coordinated science to understand the complex physical and biological processes and interactions that are impacting the condition of coral reefs and their ability to respond to a changing environment.

  8. Attenuating effects of ecosystem management on coral reefs

    PubMed Central

    Rasher, Douglas B.; Stoyle, George

    2018-01-01

    Managing diverse ecosystems is challenging because structuring drivers are often processes having diffuse impacts that attenuate from the people who were “managed” to the expected ecosystem-wide outcome. Coral reef fishes targeted for management only indirectly link to the ecosystem’s foundation (reef corals). Three successively weakening interaction tiers separate management of fishing from coral abundance. We studied 12 islands along the 700-km eastern Caribbean archipelago, comparing fished and unfished coral reefs. Fishing reduced biomass of carnivorous (snappers and groupers) and herbivorous (parrotfish and surgeonfish) fishes. We document attenuating but important effects of managing fishing, which explained 37% of variance in parrotfish abundance, 20% of variance in harmful algal abundance, and 17% of variance in juvenile coral abundance. The explained variance increased when we quantified herbivory using area-specific bite rates. Local fisheries management resulted in a 62% increase in the archipelago’s juvenile coral density, improving the ecosystem’s recovery potential from major disturbances. PMID:29750192

  9. 50 CFR 665.220 - Hawaii coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Hawaii coral reef ecosystem fisheries. [Reserved] 665.220 Section 665.220 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.220 Hawaii coral reef ecosystem fisheries. [Reserved] ...

  10. 50 CFR 665.220 - Hawaii coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Hawaii coral reef ecosystem fisheries. [Reserved] 665.220 Section 665.220 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.220 Hawaii coral reef ecosystem fisheries. [Reserved] ...

  11. 50 CFR 665.220 - Hawaii coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Hawaii coral reef ecosystem fisheries. [Reserved] 665.220 Section 665.220 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.220 Hawaii coral reef ecosystem fisheries. [Reserved] ...

  12. 50 CFR 665.220 - Hawaii coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Hawaii coral reef ecosystem fisheries. [Reserved] 665.220 Section 665.220 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.220 Hawaii coral reef ecosystem fisheries. [Reserved] ...

  13. 50 CFR 665.220 - Hawaii coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Hawaii coral reef ecosystem fisheries. [Reserved] 665.220 Section 665.220 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.220 Hawaii coral reef ecosystem fisheries. [Reserved] ...

  14. Coral Reef and Coastal Ecosystems Decision Support Workshop April 27-29, 2010 Caribbean Coral Reef Institute, La Parguera, Puerto Rico

    EPA Science Inventory

    The U.S. Environmental Protection Agency (EPA) and Caribbean Coral Reef Institute (CCRI) hosted a Coral Reef and Coastal Ecosystems Decision Support Workshop on April 27-28, 2010 at the Caribbean Coral Reef Institute in La Parguera, Puerto Rico. Forty-three participants, includin...

  15. 50 CFR 665.420 - Mariana coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Mariana coral reef ecosystem fisheries. [Reserved] 665.420 Section 665.420 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Mariana Archipelago Fisheries § 665.420 Mariana coral reef ecosystem fisheries. [Reserved] ...

  16. 50 CFR 665.420 - Mariana coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Mariana coral reef ecosystem fisheries. [Reserved] 665.420 Section 665.420 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Mariana Archipelago Fisheries § 665.420 Mariana coral reef ecosystem fisheries. [Reserved] ...

  17. 50 CFR 665.420 - Mariana coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Mariana coral reef ecosystem fisheries. [Reserved] 665.420 Section 665.420 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Mariana Archipelago Fisheries § 665.420 Mariana coral reef ecosystem fisheries. [Reserved] ...

  18. 50 CFR 665.420 - Mariana coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Mariana coral reef ecosystem fisheries. [Reserved] 665.420 Section 665.420 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Mariana Archipelago Fisheries § 665.420 Mariana coral reef ecosystem fisheries. [Reserved] ...

  19. 50 CFR 665.420 - Mariana coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Mariana coral reef ecosystem fisheries. [Reserved] 665.420 Section 665.420 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Mariana Archipelago Fisheries § 665.420 Mariana coral reef ecosystem fisheries. [Reserved] ...

  20. 50 CFR 665.620 - PRIA coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false PRIA coral reef ecosystem fisheries. [Reserved] 665.620 Section 665.620 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Pacific Remote Island Area Fisheries § 665.620 PRIA coral reef ecosystem fisheries. [Reserved] ...

  1. 50 CFR 665.620 - PRIA coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false PRIA coral reef ecosystem fisheries. [Reserved] 665.620 Section 665.620 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Pacific Remote Island Area Fisheries § 665.620 PRIA coral reef ecosystem fisheries. [Reserved] ...

  2. 50 CFR 665.620 - PRIA coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false PRIA coral reef ecosystem fisheries. [Reserved] 665.620 Section 665.620 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Pacific Remote Island Area Fisheries § 665.620 PRIA coral reef ecosystem fisheries. [Reserved] ...

  3. 50 CFR 665.620 - PRIA coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false PRIA coral reef ecosystem fisheries. [Reserved] 665.620 Section 665.620 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Pacific Remote Island Area Fisheries § 665.620 PRIA coral reef ecosystem fisheries. [Reserved] ...

  4. 50 CFR 665.620 - PRIA coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false PRIA coral reef ecosystem fisheries. [Reserved] 665.620 Section 665.620 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Pacific Remote Island Area Fisheries § 665.620 PRIA coral reef ecosystem fisheries. [Reserved] ...

  5. Quantifying Ocean Acidification and its Impacts to Coral Reef Ecosystems

    NASA Astrophysics Data System (ADS)

    Manzello, D.; Gledhill, D. K.; Enochs, I.; Andersson, A. J.

    2013-05-01

    Ocean Acidification (OA) describes the uptake of anthropogenic CO2 by the world's oceans and consequent decline in seawater pH and calcium carbonate saturation state. OA is of particular concern for coral reef ecosystems because it is expected to reduce the calcification rates of reef-building corals and other calcifiers, and may simultaneously increase the erosive abilities of key bioeroding taxa. Despite these concerns, we have little understanding of how OA will manifest in the real-world or, if, and how much of the world-wide trajectory of reef decline can be attributed to OA. With this in mind, we will present recommendations for monitoring OA of coral reef waters, as well as its ecosystem impacts over time. Different approaches and metrics, including their individual strengths and weaknesses, will be discussed. The ultimate goal of these efforts is to quantify the effects of OA on coral reef ecosystems in the real-world to robustly predict their structure and function in a high-CO2 world.

  6. 77 FR 12567 - Proposed Information Collection; Comment Request; Pacific Islands Region Coral Reef Ecosystems...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-03-01

    ... Collection; Comment Request; Pacific Islands Region Coral Reef Ecosystems Logbook and Reporting AGENCY... with, or any U.S. citizen issued with, a Special Coral Reef Ecosystem Fishing Permit (authorized under the Fishery Management Plan for Coral Reef Ecosystems of the Western Pacific Region), to complete...

  7. 78 FR 49258 - Fisheries in the Western Pacific; Special Coral Reef Ecosystem Fishing Permit

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-08-13

    ... the Western Pacific; Special Coral Reef Ecosystem Fishing Permit AGENCY: National Marine Fisheries... Reef Ecosystem Fishing Permit that would authorize Kampachi Farms, LLC, to culture and harvest a coral...: NMFS proposes to issue a Special Coral Reef Ecosystem Fishing Permit to Kampachi Farms, LLC, consistent...

  8. 50 CFR 665.120 - American Samoa coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false American Samoa coral reef ecosystem fisheries. [Reserved] 665.120 Section 665.120 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT... WESTERN PACIFIC American Samoa Fisheries § 665.120 American Samoa coral reef ecosystem fisheries...

  9. 50 CFR 665.120 - American Samoa coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false American Samoa coral reef ecosystem fisheries. [Reserved] 665.120 Section 665.120 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT... WESTERN PACIFIC American Samoa Fisheries § 665.120 American Samoa coral reef ecosystem fisheries...

  10. 50 CFR 665.120 - American Samoa coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false American Samoa coral reef ecosystem fisheries. [Reserved] 665.120 Section 665.120 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT... WESTERN PACIFIC American Samoa Fisheries § 665.120 American Samoa coral reef ecosystem fisheries...

  11. 50 CFR 665.120 - American Samoa coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false American Samoa coral reef ecosystem fisheries. [Reserved] 665.120 Section 665.120 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT... WESTERN PACIFIC American Samoa Fisheries § 665.120 American Samoa coral reef ecosystem fisheries...

  12. 50 CFR 665.120 - American Samoa coral reef ecosystem fisheries. [Reserved

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false American Samoa coral reef ecosystem fisheries. [Reserved] 665.120 Section 665.120 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT... WESTERN PACIFIC American Samoa Fisheries § 665.120 American Samoa coral reef ecosystem fisheries...

  13. 77 FR 12243 - Proposed Information Collection; Comment Request; Pacific Islands Region Coral Reef Ecosystems...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-02-29

    ... Collection; Comment Request; Pacific Islands Region Coral Reef Ecosystems Permit Form AGENCY: National... using a vessel to fish for Western Pacific coral reef ecosystem management unit species in the... allowed in the regulations; or (3) fishing for, taking, or retaining any Potentially Harvested Coral Reef...

  14. Management Strategy Evaluation Applied to Coral Reef Ecosystems in Support of Ecosystem-Based Management.

    PubMed

    Weijerman, Mariska; Fulton, Elizabeth A; Brainard, Russell E

    2016-01-01

    Ecosystem modelling is increasingly used to explore ecosystem-level effects of changing environmental conditions and management actions. For coral reefs there has been increasing interest in recent decades in the use of ecosystem models for evaluating the effects of fishing and the efficacy of marine protected areas. However, ecosystem models that integrate physical forcings, biogeochemical and ecological dynamics, and human induced perturbations are still underdeveloped. We applied an ecosystem model (Atlantis) to the coral reef ecosystem of Guam using a suite of management scenarios prioritized in consultation with local resource managers to review the effects of each scenario on performance measures related to the ecosystem, the reef-fish fishery (e.g., fish landings) and coral habitat. Comparing tradeoffs across the selected scenarios showed that each scenario performed best for at least one of the selected performance indicators. The integrated 'full regulation' scenario outperformed other scenarios with four out of the six performance metrics at the cost of reef-fish landings. This model application quantifies the socio-ecological costs and benefits of alternative management scenarios. When the effects of climate change were taken into account, several scenarios performed equally well, but none prevented a collapse in coral biomass over the next few decades assuming a business-as-usual greenhouse gas emissions scenario.

  15. Management Strategy Evaluation Applied to Coral Reef Ecosystems in Support of Ecosystem-Based Management

    PubMed Central

    Weijerman, Mariska; Fulton, Elizabeth A.; Brainard, Russell E.

    2016-01-01

    Ecosystem modelling is increasingly used to explore ecosystem-level effects of changing environmental conditions and management actions. For coral reefs there has been increasing interest in recent decades in the use of ecosystem models for evaluating the effects of fishing and the efficacy of marine protected areas. However, ecosystem models that integrate physical forcings, biogeochemical and ecological dynamics, and human induced perturbations are still underdeveloped. We applied an ecosystem model (Atlantis) to the coral reef ecosystem of Guam using a suite of management scenarios prioritized in consultation with local resource managers to review the effects of each scenario on performance measures related to the ecosystem, the reef-fish fishery (e.g., fish landings) and coral habitat. Comparing tradeoffs across the selected scenarios showed that each scenario performed best for at least one of the selected performance indicators. The integrated ‘full regulation’ scenario outperformed other scenarios with four out of the six performance metrics at the cost of reef-fish landings. This model application quantifies the socio-ecological costs and benefits of alternative management scenarios. When the effects of climate change were taken into account, several scenarios performed equally well, but none prevented a collapse in coral biomass over the next few decades assuming a business-as-usual greenhouse gas emissions scenario. PMID:27023183

  16. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems.

    PubMed

    Rix, Laura; de Goeij, Jasper M; Mueller, Christina E; Struck, Ulrich; Middelburg, Jack J; van Duyl, Fleur C; Al-Horani, Fuad A; Wild, Christian; Naumann, Malik S; van Oevelen, Dick

    2016-01-07

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21-40% of the mucus carbon and 32-39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments.

  17. Integration of coral reef ecosystem process studies and remote sensing: Chapter 5

    USGS Publications Warehouse

    Brook, John; Yates, Kimberly; Halley, Robert

    2006-01-01

    Worldwide, local-scale anthropogenic stress combined with global climate change is driving shifts in the state of reef benthic communities from coral-rich to micro- or macroalgal-dominated (Knowlton, 1992; Done, 1999). Such phase shifts in reef benthic communities may be either abrupt or gradual, and case studies from diverse ocean basins demonstrate that recovery, while uncertain (Hughes, 1994), typically involves progression through successional stages (Done, 1992). These transitions in benthic community structure involve changes in community metabolism, and accordingly, the holistic evaluation of associated biogeochemical variables is of great intrinsic value (Done, 1992). Effective reef management requires advance prediction of coral reef alteration in the face of anthropogenic stress and change in the global environment (Hatcher, 1997a). In practice, this goal requires techniques that can rapidly discern, at an early stage, sublethal effects that may cause long-term increases in mortality (brown, 1988; Grigg and Dollar, 1990). Such methods would improve our understanding of the differences in the population, community, and ecosystem structure, as well as function, between pristine and degraded reefs. This knowledge base could then support scientifically based management strategies (Done, 1992). Brown (1988) noted the general lack of rigor in the assessment of stress on coral reefs and suggested that more quantitative approaches than currently exist are needed to allow objective understanding of coral reef dynamics. Sensitive techniques for the timely appraisal of pollution effects or generalized endemic stress in coral reefs are sorely lacking (Grigg and Dollar, 1990; Wilkinsin, 1992). Moreover, monitoring methods based on population inventories, sclerochronology, or reproductive biology tend to myopic and may give inconsistent results. Ideally, an improved means of evaluating reef stress would discriminate mortality due to natural causes from morality to

  18. Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems

    PubMed Central

    Rix, Laura; de Goeij, Jasper M.; Mueller, Christina E.; Struck, Ulrich; Middelburg, Jack J.; van Duyl, Fleur C.; Al-Horani, Fuad A.; Wild, Christian; Naumann, Malik S.; van Oevelen, Dick

    2016-01-01

    Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21–40% of the mucus carbon and 32–39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments. PMID:26740019

  19. How models can support ecosystem-based management of coral reefs

    NASA Astrophysics Data System (ADS)

    Weijerman, Mariska; Fulton, Elizabeth A.; Janssen, Annette B. G.; Kuiper, Jan J.; Leemans, Rik; Robson, Barbara J.; van de Leemput, Ingrid A.; Mooij, Wolf M.

    2015-11-01

    Despite the importance of coral reef ecosystems to the social and economic welfare of coastal communities, the condition of these marine ecosystems have generally degraded over the past decades. With an increased knowledge of coral reef ecosystem processes and a rise in computer power, dynamic models are useful tools in assessing the synergistic effects of local and global stressors on ecosystem functions. We review representative approaches for dynamically modeling coral reef ecosystems and categorize them as minimal, intermediate and complex models. The categorization was based on the leading principle for model development and their level of realism and process detail. This review aims to improve the knowledge of concurrent approaches in coral reef ecosystem modeling and highlights the importance of choosing an appropriate approach based on the type of question(s) to be answered. We contend that minimal and intermediate models are generally valuable tools to assess the response of key states to main stressors and, hence, contribute to understanding ecological surprises. As has been shown in freshwater resources management, insight into these conceptual relations profoundly influences how natural resource managers perceive their systems and how they manage ecosystem recovery. We argue that adaptive resource management requires integrated thinking and decision support, which demands a diversity of modeling approaches. Integration can be achieved through complimentary use of models or through integrated models that systemically combine all relevant aspects in one model. Such whole-of-system models can be useful tools for quantitatively evaluating scenarios. These models allow an assessment of the interactive effects of multiple stressors on various, potentially conflicting, management objectives. All models simplify reality and, as such, have their weaknesses. While minimal models lack multidimensionality, system models are likely difficult to interpret as they

  20. Critical research needs for identifying future changes in Gulf coral reef ecosystems.

    PubMed

    Feary, David A; Burt, John A; Bauman, Andrew G; Al Hazeem, Shaker; Abdel-Moati, Mohamed A; Al-Khalifa, Khalifa A; Anderson, Donald M; Amos, Carl; Baker, Andrew; Bartholomew, Aaron; Bento, Rita; Cavalcante, Geórgenes H; Chen, Chaolun Allen; Coles, Steve L; Dab, Koosha; Fowler, Ashley M; George, David; Grandcourt, Edwin; Hill, Ross; John, David M; Jones, David A; Keshavmurthy, Shashank; Mahmoud, Huda; Moradi Och Tapeh, Mahdi; Mostafavi, Pargol Ghavam; Naser, Humood; Pichon, Michel; Purkis, Sam; Riegl, Bernhard; Samimi-Namin, Kaveh; Sheppard, Charles; Vajed Samiei, Jahangir; Voolstra, Christian R; Wiedenmann, Joerg

    2013-07-30

    Expert opinion was assessed to identify current knowledge gaps in determining future changes in Arabian/Persian Gulf (thereafter 'Gulf') coral reefs. Thirty-one participants submitted 71 research questions that were peer-assessed in terms of scientific importance (i.e., filled a knowledge gap and was a research priority) and efficiency in resource use (i.e., was highly feasible and ecologically broad). Ten research questions, in six major research areas, were highly important for both understanding Gulf coral reef ecosystems and also an efficient use of limited research resources. These questions mirrored global evaluations of the importance of understanding and evaluating biodiversity, determining the potential impacts of climate change, the role of anthropogenic impacts in structuring coral reef communities, and economically evaluating coral reef communities. These questions provide guidance for future research on coral reef ecosystems within the Gulf, and enhance the potential for assessment and management of future changes in this globally significant region. Copyright © 2013 Elsevier Ltd. All rights reserved.

  1. Critical research needs for identifying future changes in Gulf coral reef ecosystems

    PubMed Central

    Feary, David A.; Burt, John A.; Bauman, Andrew G.; Al Hazeem, Shaker; Abdel-Moati, Mohamed A.; Al-Khalifa, Khalifa A.; Anderson, Donald M.; Amos, Carl; Baker, Andrew; Bartholomew, Aaron; Bento, Rita; Cavalcante, Geórgenes H.; Chen, Chaolun Allen; Coles, Steve L.; Dab, Koosha; Fowler, Ashley M.; George, David; Grandcourt, Edwin; Hill, Ross; John, David M.; Jones, David A.; Keshavmurthy, Shashank; Mahmoud, Huda; Moradi Och Tapeh, Mahdi; Mostafavi, Pargol Ghavam; Naser, Humood; Pichon, Michel; Purkis, Sam; Riegl, Bernhard; Samimi-Namin, Kaveh; Sheppard, Charles; Vajed Samiei, Jahangir; Voolstra, Christian R.; Wiedenmann, Joerg

    2014-01-01

    Expert opinion was assessed to identify current knowledge gaps in determining future changes in Arabian/ Persian Gulf (thereafter ‘Gulf’) coral reefs. Thirty-one participants submitted 71 research questions that were peer-assessed in terms of scientific importance (i.e., filled a knowledge gap and was a research priority) and efficiency in resource use (i.e., was highly feasible and ecologically broad). Ten research questions, in six major research areas, were highly important for both understanding Gulf coral reef ecosystems and also an efficient use of limited research resources. These questions mirrored global evaluations of the importance of understanding and evaluating biodiversity, determining the potential impacts of climate change, the role of anthropogenic impacts in structuring coral reef communities, and economically evaluating coral reef communities. These questions provide guidance for future research on coral reef ecosystems within the Gulf, and enhance the potential for assessment and management of future changes in this globally significant region. PMID:23643407

  2. Challenges for Ecosystem Services Provided by Coral Reefs In the Face of Climate Change

    NASA Astrophysics Data System (ADS)

    Kikuchi, R. K.; Elliff, C. I.

    2014-12-01

    Coral reefs provide many ecosystem services of which coastal populations are especially dependent upon, both in cases of extreme events and in daily life. However, adaptation to climate change is still relatively unknown territory regarding the ecosystem services provided by coastal environments, such as coral reefs. Management strategies usually consider climate change as a distant issue and rarely include ecosystem services in decision-making. Coral reefs are among the most vulnerable environments to climate change, considering the impact that increased ocean temperature and acidity have on the organisms that compose this ecosystem. If no actions are taken, the most likely scenario to occur will be of extreme decline in the ecosystem services provided by coral reefs. Loss of biodiversity due to the pressures of ocean warming and acidification will lead to increased price of seafood products, negative impact on food security, and ecological imbalances. Also, sea-level rise and fragile structures due to carbonate dissolution will increase vulnerability to storms, which can lead to shoreline erosion and ultimately threaten coastal communities. Both these conditions will undoubtedly affect recreation and tourism, which are often the most important use values in the case of coral reef systems. Adaptation strategies to climate change must take on an ecosystem-based approach with continuous monitoring programs, so that multiple ecosystem services are considered and not only retrospective trends are analyzed. Brazilian coral reefs have been monitored on a regular basis since 2000 and, considering that these marginal coral reefs of the eastern Atlantic are naturally under stressful conditions (e.g. high sedimentation rates), inshore reefs of Brazil, such as those in Tinharé-Boipeba, have shown lower vitality rates due to greater impacts from the proximity to the coastal area (e.g. pollution, overfishing, sediment run-off). This chronic negative impact must be addressed

  3. Occurrence and distribution of antifouling biocide Irgarol-1051 in coral reef ecosystems, Zanzibar.

    PubMed

    Sheikh, Mohammed A; Juma, Fatma S; Staehr, Peter; Dahl, Karsten; Rashid, Rashid J; Mohammed, Mohammed S; Ussi, Ali M; Ali, Hassan R

    2016-08-15

    2-methythiol-4-tert-butylamino-6-cyclopropylamino-s-triazine (Irgarol-1051) has been widely used as effective alternative antifouling paint in marine structures including ships. However, it has been causing deleterious effects to marine organisms including reef building corals. The main objective of this study was to establish baseline levels of Irgarol-1051 around coral reefs and nearby ecosystems along coastline of Zanzibar Island. The levels of Irgarol-1051 ranged from 1.35ng/L around coral reefs to 15.44ng/L around harbor with average concentration of 4.11 (mean)±0.57 (SD) ng/L. This is below Environmental Risk Limit of 24ng/L as proposed by Dutch Authorities which suggests that the contamination is not alarming especially for coral reef ecosystem health. The main possible sources of the contamination are from shipping activities. This paper provides important baseline information of Irgarol-1051 around the coral reef ecosystems within the Western Indian Ocean (WIO) region and may be useful for formulation of marine conservation strategies and policies. Copyright © 2016 Elsevier Ltd. All rights reserved.

  4. Divergence of seafloor elevation and sea level rise in coral reef ecosystems

    NASA Astrophysics Data System (ADS)

    Yates, Kimberly K.; Zawada, David G.; Smiley, Nathan A.; Tiling-Range, Ginger

    2017-04-01

    Coral reefs serve as natural barriers that protect adjacent shorelines from coastal hazards such as storms, waves, and erosion. Projections indicate global degradation of coral reefs due to anthropogenic impacts and climate change will cause a transition to net erosion by mid-century. Here, we provide a comprehensive assessment of the combined effect of all of the processes affecting seafloor accretion and erosion by measuring changes in seafloor elevation and volume for five coral reef ecosystems in the Atlantic, Pacific, and Caribbean over the last several decades. Regional-scale mean elevation and volume losses were observed at all five study sites and in 77 % of the 60 individual habitats that we examined across all study sites. Mean seafloor elevation losses for whole coral reef ecosystems in our study ranged from -0.09 to -0.8 m, corresponding to net volume losses ranging from 3.4 × 106 to 80.5 × 106 m3 for all study sites. Erosion of both coral-dominated substrate and non-coral substrate suggests that the current rate of carbonate production is no longer sufficient to support net accretion of coral reefs or adjacent habitats. We show that regional-scale loss of seafloor elevation and volume has accelerated the rate of relative sea level rise in these regions. Current water depths have increased to levels not predicted until near the year 2100, placing these ecosystems and nearby communities at elevated and accelerating risk to coastal hazards. Our results set a new baseline for projecting future impacts to coastal communities resulting from degradation of coral reef systems and associated losses of natural and socioeconomic resources.

  5. Satellite Remote Sensing of Coral Reefs: By Learning about Coral Reefs, Students Gain an Understanding of Ecosystems and How Cutting-Edge Technology Can Be Used to Study Ecological Change

    ERIC Educational Resources Information Center

    Palandro, David; Thoms, Kristin; Kusek, Kristen; Muller-Karger, Frank; Greely, Teresa

    2005-01-01

    Coral reefs are one of the most important ecosystems on the planet, providing sustenance to both marine organisms and humans. Yet they are also one of the most endangered ecosystems as coral reef coverage has declined dramatically in the past three decades. Researchers continually seek better ways to map coral reef coverage and monitor changes…

  6. Climate warming, marine protected areas and the ocean-scale integrity of coral reef ecosystems.

    PubMed

    Graham, Nicholas A J; McClanahan, Tim R; MacNeil, M Aaron; Wilson, Shaun K; Polunin, Nicholas V C; Jennings, Simon; Chabanet, Pascale; Clark, Susan; Spalding, Mark D; Letourneur, Yves; Bigot, Lionel; Galzin, René; Ohman, Marcus C; Garpe, Kajsa C; Edwards, Alasdair J; Sheppard, Charles R C

    2008-08-27

    Coral reefs have emerged as one of the ecosystems most vulnerable to climate variation and change. While the contribution of a warming climate to the loss of live coral cover has been well documented across large spatial and temporal scales, the associated effects on fish have not. Here, we respond to recent and repeated calls to assess the importance of local management in conserving coral reefs in the context of global climate change. Such information is important, as coral reef fish assemblages are the most species dense vertebrate communities on earth, contributing critical ecosystem functions and providing crucial ecosystem services to human societies in tropical countries. Our assessment of the impacts of the 1998 mass bleaching event on coral cover, reef structural complexity, and reef associated fishes spans 7 countries, 66 sites and 26 degrees of latitude in the Indian Ocean. Using Bayesian meta-analysis we show that changes in the size structure, diversity and trophic composition of the reef fish community have followed coral declines. Although the ocean scale integrity of these coral reef ecosystems has been lost, it is positive to see the effects are spatially variable at multiple scales, with impacts and vulnerability affected by geography but not management regime. Existing no-take marine protected areas still support high biomass of fish, however they had no positive affect on the ecosystem response to large-scale disturbance. This suggests a need for future conservation and management efforts to identify and protect regional refugia, which should be integrated into existing management frameworks and combined with policies to improve system-wide resilience to climate variation and change.

  7. Divergence of seafloor elevation and sea level rise in coral reef ecosystems

    USGS Publications Warehouse

    Yates, Kimberly K.; Zawada, David G.; Smiley, Nathan A.; Tiling-Range, Ginger

    2017-01-01

    Coral reefs serve as natural barriers that protect adjacent shorelines from coastal hazards such as storms, waves, and erosion. Projections indicate global degradation of coral reefs due to anthropogenic impacts and climate change will cause a transition to net erosion by mid-century. Here, we provide a comprehensive assessment of the combined effect of all of the processes affecting seafloor accretion and erosion by measuring changes in seafloor elevation and volume for five coral reef ecosystems in the Atlantic, Pacific, and Caribbean over the last several decades. Regional-scale mean elevation and volume losses were observed at all five study sites and in 77 % of the 60 individual habitats that we examined across all study sites. Mean seafloor elevation losses for whole coral reef ecosystems in our study ranged from −0.09 to −0.8 m, corresponding to net volume losses ranging from 3.4  ×  106 to 80.5  ×  106 m3 for all study sites. Erosion of both coral-dominated substrate and non-coral substrate suggests that the current rate of carbonate production is no longer sufficient to support net accretion of coral reefs or adjacent habitats. We show that regional-scale loss of seafloor elevation and volume has accelerated the rate of relative sea level rise in these regions. Current water depths have increased to levels not predicted until near the year 2100, placing these ecosystems and nearby communities at elevated and accelerating risk to coastal hazards. Our results set a new baseline for projecting future impacts to coastal communities resulting from degradation of coral reef systems and associated losses of natural and socioeconomic resources.

  8. Clues to Coral Reef Ecosystem Health: Spectral Analysis Coupled with Radiative Transfer Modeling

    NASA Astrophysics Data System (ADS)

    Guild, L.; Ganapol, B.; Kramer, P.; Armstrong, R.; Gleason, A.; Torres, J.; Johnson, L.; Garfield, N.

    2003-12-01

    Coral reefs are among the world's most productive and biologically rich ecosystems and are some of the oldest ecosystems on Earth. Coralline structures protect coastlines from storms, maintain high diversity of marine life, and provide nurseries for marine species. Coral reefs play a role in carbon cycling through high rates of organic carbon metabolism and calcification. Coral reefs provide fisheries habitat that are the sole protein source for humans on remote islands. Reefs respond immediately to environmental change and therefore are considered "canaries" of the oceans. However, the world's reefs are in peril: they have shrunk 10-50% from their historical extent due to climate change and anthropogenic activity. An important contribution to coral reef research is improved spectral distinction of reef species' health where anthropogenic activity and climate change impacts are high. Relatively little is known concerning the spectral properties of coral or how coral structures reflect and transmit light. New insights into optical processes of corals under stressed conditions can lead to improved interpretation of airborne and satellite data and forecasting of immediate or long-term impacts of events such as bleaching and disease in coral. We are investigating the spatial and spectral resolution required to detect remotely changes in reef health by coupling spectral analysis of in situ spectra and airborne spectral data with a new radiative transfer model called CorMOD2. Challenges include light attenuation by the water column, atmospheric scattering, and scattering caused by the coral themselves that confound the spectral signal. In CorMOD2, input coral reflectance measurements produce modeled absorption through an inversion at each visible wavelength. The first model development phase of CorMOD2 imposes a scattering baseline that is constant regardless of coral condition, and further specifies that coral is optically thick. Evolution of CorMOD2 is towards a coral

  9. Linking Terrigenous Sediment Delivery to Declines in Coral Reef Ecosystem Services

    EPA Science Inventory

    Worldwide coral reef conditions continue to decline despite the valuable socioeconomic benefits of these ecosystems. There is growing recognition that quantifying reefs in terms reflecting what stakeholders value is vital for comparing inherent tradeoffs among coastal management ...

  10. Consistent nutrient storage and supply mediated by diverse fish communities in coral reef ecosystems.

    PubMed

    Allgeier, Jacob E; Layman, Craig A; Mumby, Peter J; Rosemond, Amy D

    2014-08-01

    Corals thrive in low nutrient environments and the conservation of these globally imperiled ecosystems is largely dependent on mitigating the effects of anthropogenic nutrient enrichment. However, to better understand the implications of anthropogenic nutrients requires a heightened understanding of baseline nutrient dynamics within these ecosystems. Here, we provide a novel perspective on coral reef nutrient dynamics by examining the role of fish communities in the supply and storage of nitrogen (N) and phosphorus (P). We quantified fish-mediated nutrient storage and supply for 144 species and modeled these data onto 172 fish communities (71 729 individual fish), in four types of coral reefs, as well as seagrass and mangrove ecosystems, throughout the Northern Antilles. Fish communities supplied and stored large quantities of nutrients, with rates varying among ecosystem types. The size structure and diversity of the fish communities best predicted N and P supply and storage and N : P supply, suggesting that alterations to fish communities (e.g., overfishing) will have important implications for nutrient dynamics in these systems. The stoichiometric ratio (N : P) for storage in fish mass (~8 : 1) and supply (~20 : 1) was notably consistent across the four coral reef types (but not seagrass or mangrove ecosystems). Published nutrient enrichment studies on corals show that deviations from this N : P supply ratio may be associated with poor coral fitness, providing qualitative support for the hypothesis that corals and their symbionts may be adapted to specific ratios of nutrient supply. Consumer nutrient stoichiometry provides a baseline from which to better understand nutrient dynamics in coral reef and other coastal ecosystems, information that is greatly needed if we are to implement more effective measures to ensure the future health of the world's oceans. © 2014 John Wiley & Sons Ltd.

  11. Small change, big difference: Sea surface temperature distributions for tropical coral reef ecosystems, 1950-2011

    NASA Astrophysics Data System (ADS)

    Lough, J. M.

    2012-09-01

    Changes in tropical sea surface temperature (SST) are examined over the period 1950-2011 during which global average temperature warmed by 0.4°C. Average tropical SST is warming about 70% of the global average rate. Spatially, significant warming between the two time periods, 1950-1980 and 1981-2011, has occurred across 65% of the tropical oceans. Coral reef ecosystems occupy 10% of the tropical oceans, typically in regions of warmer (+1.8°C) and less variable SST (80% of months within 3.3°C range) compared to non-reef areas (80% of months within 7.0°C range). SST is a primary controlling factor of coral reef distribution and coral reef organisms have already shown their sensitivity to the relatively small amount of warming observed so far through, for example, more frequent coral bleaching events and outbreaks of coral disease. Experimental evidence is also emerging of possible thermal thresholds in the range 30°C-32°C for some physiological processes of coral reef organisms. Relatively small changes in SST have already resulted in quite large differences in SST distribution with a maximum ‘hot spot’ of change in the near-equatorial Indo-Pacific which encompasses both the Indo-Pacific warm pools and the center of coral reef biodiversity. Identification of this hot spot of SST change is not new but this study highlights its significance with respect to tropical coral reef ecosystems. Given the modest amount of warming to date, changes in SST distribution are of particular concern for coral reefs given additional local anthropogenic stresses on many reefs and ongoing ocean acidification likely to increasingly compromise coral reef processes.

  12. Ecological intereactions of reef building corals

    EPA Science Inventory

    Coral reefs are very important marine ecosystems because they support tremendous biodiversity and reefs are critical economic resources many coastal nations. Tropical reef structures are largely built by stony corals. This presentation provides background on basic coral biology t...

  13. NOAA Coral Reef Watch: Decision Support Tools for Coral Reef Managers

    NASA Astrophysics Data System (ADS)

    Rauenzahn, J.; Eakin, C.; Skirving, W. J.; Burgess, T.; Christensen, T.; Heron, S. F.; Li, J.; Liu, G.; Morgan, J.; Nim, C.; Parker, B. A.; Strong, A. E.

    2010-12-01

    A multitude of natural and anthropogenic stressors exert substantial influence on coral reef ecosystems and contribute to bleaching events, slower coral growth, infectious disease outbreaks, and mortality. Satellite-based observations can monitor, at a global scale, environmental conditions that influence both short-term and long-term coral reef ecosystem health. From research to operations, NOAA Coral Reef Watch (CRW) incorporates paleoclimatic, in situ, and satellite-based biogeophysical data to provide near-real-time and forecast information and tools to help managers, researchers, and other stakeholders interpret coral health and stress. CRW has developed an operational, near-real-time product suite that includes sea surface temperature (SST), SST time series data, SST anomaly charts, coral bleaching HotSpots, and Degree Heating Weeks (DHW). Bi-weekly global SST analyses are based on operational nighttime-only SST at 50-km resolution. CRW is working to develop high-resolution products to better address thermal stress on finer scales and is applying climate models to develop seasonal outlooks of coral bleaching. Automated Satellite Bleaching Alerts (SBAs), available at Virtual Stations worldwide, provide the only global early-warning system to notify managers of changing reef environmental conditions. Currently, CRW is collaborating with numerous domestic and international partners to develop new tools to address ocean acidification, infectious diseases of corals, combining light and temperature to detect coral photosystem stress, and other parameters.

  14. Community production modulates coral reef pH and the sensitivity of ecosystem calcification to ocean acidification

    NASA Astrophysics Data System (ADS)

    DeCarlo, Thomas M.; Cohen, Anne L.; Wong, George T. F.; Shiah, Fuh-Kwo; Lentz, Steven J.; Davis, Kristen A.; Shamberger, Kathryn E. F.; Lohmann, Pat

    2017-01-01

    Coral reefs are built of calcium carbonate (CaCO3) produced biogenically by a diversity of calcifying plants, animals, and microbes. As the ocean warms and acidifies, there is mounting concern that declining calcification rates could shift coral reef CaCO3 budgets from net accretion to net dissolution. We quantified net ecosystem calcification (NEC) and production (NEP) on Dongsha Atoll, northern South China Sea, over a 2 week period that included a transient bleaching event. Peak daytime pH on the wide, shallow reef flat during the nonbleaching period was ˜8.5, significantly elevated above that of the surrounding open ocean (˜8.0-8.1) as a consequence of daytime NEP (up to 112 mmol C m-2 h-1). Diurnal-averaged NEC was 390 ± 90 mmol CaCO3 m-2 d-1, higher than any other coral reef studied to date despite comparable calcifier cover (25%) and relatively high fleshy algal cover (19%). Coral bleaching linked to elevated temperatures significantly reduced daytime NEP by 29 mmol C m-2 h-1. pH on the reef flat declined by 0.2 units, causing a 40% reduction in NEC in the absence of pH changes in the surrounding open ocean. Our findings highlight the interactive relationship between carbonate chemistry of coral reef ecosystems and ecosystem production and calcification rates, which are in turn impacted by ocean warming. As open-ocean waters bathing coral reefs warm and acidify over the 21st century, the health and composition of reef benthic communities will play a major role in determining on-reef conditions that will in turn dictate the ecosystem response to climate change.

  15. Net Ecosystem Calcification by a Coral Reef Community under Natural Acidification

    NASA Astrophysics Data System (ADS)

    Shamberger, K.; Lentz, S. J.; Cohen, A. L.

    2016-02-01

    Net Ecosystem Calcification (NEC) is a measure of the balance between calcium carbonate production (calcification) and loss (dissolution) within a coral reef system. Establishing baseline NEC estimates for a broad range of coral reef systems today provides much needed information to constrain spatial and temporal variability within and amongst different systems, investigate the sensitivity of ecosystem scale calcification to environmental forcing, and improve projections of coral reef futures under ocean acidification throughout this century. Previous NEC studies have been limited to coral reefs with unidirectional (Lagrangian and flow respirometry studies) or negligible (slack water Eulerian studies) water flow across the reef for at least part of the day, usually on the order of hours. Here, we present NEC rates in a naturally low pH, semi-enclosed coral reef lagoon with high coral cover and diversity and tidally driven flow within the Palau Rock Islands. NEC was determined from data collected over the full diel cycle for four consecutive days, during two successive years and different seasons, using total alkalinity (TA), salinity, and volume budgets. Two different methods used to calculate NEC are in good agreement and show that the coral community is net calcifying despite high rates of bioerosion and pH (mean pH = 7.88 ± 0.02) and aragonite saturation state (Ωar = 2.66 ± 0.11) levels close to those projected for the end of this century. Critically, NEC rates in year 1 (17.0 - 23.7 mmol m-2 d-1) were half those of year 2 (42.0 - 48.1 mmol m-2 d-1), though the carbonate chemistry of the source water did not change between years. This suggests that single occupations and short term measurements do not adequately capture the full range of NEC variability within a system and that factors other than ocean acidification play an important role in modulating NEC rates.

  16. Shark baselines and the conservation role of remote coral reef ecosystems

    PubMed Central

    Ferretti, Francesco; Curnick, David; Liu, Keli; Romanov, Evgeny V.; Block, Barbara A.

    2018-01-01

    Scientific monitoring has recorded only a recent fraction of the oceans’ alteration history. This biases our understanding of marine ecosystems. Remote coral reef ecosystems are often considered pristine because of high shark abundance. However, given the long history and global nature of fishing, sharks’ vulnerability, and the ecological consequences of shark declines, these states may not be natural. In the Chagos archipelago, one of the remotest coral reef systems on the planet, protected by a very large marine reserve, we integrated disparate fisheries and scientific survey data to reconstruct baselines and long-term population trajectories of two dominant sharks. In 2012, we estimated 571,310 gray reef and 31,693 silvertip sharks, about 79 and 7% of their baseline levels. These species were exploited longer and more intensively than previously thought and responded to fishing and protection with variable and compensatory population trajectories. Our approach highlights the value of integrative and historical analyses to evaluate large marine ecosystems currently considered pristine. PMID:29532033

  17. Mesopredator trophodynamics on thermally stressed coral reefs

    NASA Astrophysics Data System (ADS)

    Hempson, Tessa N.; Graham, Nicholas A. J.; MacNeil, M. Aaron; Hoey, Andrew S.; Almany, Glenn R.

    2018-03-01

    Ecosystems are becoming vastly modified through disturbance. In coral reef ecosystems, the differential susceptibility of coral taxa to climate-driven bleaching is predicted to shift coral assemblages towards reefs with an increased relative abundance of taxa with high thermal tolerance. Many thermally tolerant coral species are characterised by low structural complexity, with reduced habitat niche space for the small-bodied coral reef fishes on which piscivorous mesopredators feed. This study used a patch reef array to investigate the potential impacts of climate-driven shifts in coral assemblages on the trophodynamics of reef mesopredators and their prey communities. The `tolerant' reef treatment consisted only of coral taxa of low susceptibility to bleaching, while `vulnerable' reefs included species of moderate to high thermal vulnerability. `Vulnerable' reefs had higher structural complexity, and the fish assemblages that established on these reefs over 18 months had higher species diversity, abundance and biomass than those on `tolerant' reefs. Fish assemblages on `tolerant' reefs were also more strongly influenced by the introduction of a mesopredator ( Cephalopholis boenak). Mesopredators on `tolerant' reefs had lower lipid content in their muscle tissue by the end of the 6-week experiment. Such sublethal energetic costs can compromise growth, fecundity, and survivorship, resulting in unexpected population declines in long-lived mesopredators. This study provides valuable insight into the altered trophodynamics of future coral reef ecosystems, highlighting the potentially increased vulnerability of reef fish assemblages to predation as reef structure declines, and the cost of changing prey availability on mesopredator condition.

  18. Simple ecological trade-offs give rise to emergent cross-ecosystem distributions of a coral reef fish.

    PubMed

    Grol, Monique G G; Nagelkerken, Ivan; Rypel, Andrew L; Layman, Craig A

    2011-01-01

    Ecosystems are intricately linked by the flow of organisms across their boundaries, and such connectivity can be essential to the structure and function of the linked ecosystems. For example, many coral reef fish populations are maintained by the movement of individuals from spatially segregated juvenile habitats (i.e., nurseries, such as mangroves and seagrass beds) to areas preferred by adults. It is presumed that nursery habitats provide for faster growth (higher food availability) and/or low predation risk for juveniles, but empirical data supporting this hypothesis is surprisingly lacking for coral reef fishes. Here, we investigate potential mechanisms (growth, predation risk, and reproductive investment) that give rise to the distribution patterns of a common Caribbean reef fish species, Haemulon flavolineatum (French grunt). Adults were primarily found on coral reefs, whereas juvenile fish only occurred in non-reef habitats. Contrary to our initial expectations, analysis of length-at-age revealed that growth rates were highest on coral reefs and not within nursery habitats. Survival rates in tethering trials were 0% for small juvenile fish transplanted to coral reefs and 24-47% in the nurseries. As fish grew, survival rates on coral reefs approached those in non-reef habitats (56 vs. 77-100%, respectively). As such, predation seems to be the primary factor driving across-ecosystem distributions of this fish, and thus the primary reason why mangrove and seagrass habitats function as nursery habitat. Identifying the mechanisms that lead to such distributions is critical to develop appropriate conservation initiatives, identify essential fish habitat, and predict impacts associated with environmental change.

  19. Simple ecological trade-offs give rise to emergent cross-ecosystem distributions of a coral reef fish

    PubMed Central

    Grol, Monique G. G.; Rypel, Andrew L.; Layman, Craig A.

    2010-01-01

    Ecosystems are intricately linked by the flow of organisms across their boundaries, and such connectivity can be essential to the structure and function of the linked ecosystems. For example, many coral reef fish populations are maintained by the movement of individuals from spatially segregated juvenile habitats (i.e., nurseries, such as mangroves and seagrass beds) to areas preferred by adults. It is presumed that nursery habitats provide for faster growth (higher food availability) and/or low predation risk for juveniles, but empirical data supporting this hypothesis is surprisingly lacking for coral reef fishes. Here, we investigate potential mechanisms (growth, predation risk, and reproductive investment) that give rise to the distribution patterns of a common Caribbean reef fish species, Haemulon flavolineatum (French grunt). Adults were primarily found on coral reefs, whereas juvenile fish only occurred in non-reef habitats. Contrary to our initial expectations, analysis of length-at-age revealed that growth rates were highest on coral reefs and not within nursery habitats. Survival rates in tethering trials were 0% for small juvenile fish transplanted to coral reefs and 24–47% in the nurseries. As fish grew, survival rates on coral reefs approached those in non-reef habitats (56 vs. 77–100%, respectively). As such, predation seems to be the primary factor driving across-ecosystem distributions of this fish, and thus the primary reason why mangrove and seagrass habitats function as nursery habitat. Identifying the mechanisms that lead to such distributions is critical to develop appropriate conservation initiatives, identify essential fish habitat, and predict impacts associated with environmental change. PMID:21072542

  20. Coral identity underpins architectural complexity on Caribbean reefs.

    PubMed

    Alvarez-Filip, Lorenzo; Dulvy, Nicholas K; Côte, Isabelle M; Watkinson, Andrew R; Gill, Jennifer A

    2011-09-01

    The architectural complexity of ecosystems can greatly influence their capacity to support biodiversity and deliver ecosystem services. Understanding the components underlying this complexity can aid the development of effective strategies for ecosystem conservation. Caribbean coral reefs support and protect millions of livelihoods, but recent anthropogenic change is shifting communities toward reefs dominated by stress-resistant coral species, which are often less architecturally complex. With the regionwide decline in reef fish abundance, it is becoming increasingly important to understand changes in coral reef community structure and function. We quantify the influence of coral composition, diversity, and morpho-functional traits on the architectural complexity of reefs across 91 sites at Cozumel, Mexico. Although reef architectural complexity increases with coral cover and species richness, it is highest on sites that are low in taxonomic evenness and dominated by morpho-functionally important, reef-building coral genera, particularly Montastraea. Sites with similar coral community composition also tend to occur on reefs with very similar architectural complexity, suggesting that reef structure tends to be determined by the same key species across sites. Our findings provide support for prioritizing and protecting particular reef types, especially those dominated by key reef-building corals, in order to enhance reef complexity.

  1. Confronting the coral reef crisis.

    PubMed

    Bellwood, D R; Hughes, T P; Folke, C; Nyström, M

    2004-06-24

    The worldwide decline of coral reefs calls for an urgent reassessment of current management practices. Confronting large-scale crises requires a major scaling-up of management efforts based on an improved understanding of the ecological processes that underlie reef resilience. Managing for improved resilience, incorporating the role of human activity in shaping ecosystems, provides a basis for coping with uncertainty, future changes and ecological surprises. Here we review the ecological roles of critical functional groups (for both corals and reef fishes) that are fundamental to understanding resilience and avoiding phase shifts from coral dominance to less desirable, degraded ecosystems. We identify striking biogeographic differences in the species richness and composition of functional groups, which highlight the vulnerability of Caribbean reef ecosystems. These findings have profound implications for restoration of degraded reefs, management of fisheries, and the focus on marine protected areas and biodiversity hotspots as priorities for conservation.

  2. [A review of the role and function of microbes in coral reef ecosystem].

    PubMed

    Zhou, Jin; Jin, Hui; Cai, Zhong-Hua

    2014-03-01

    Coral reef is consisted with several kinds of reef-associated organisms, including coral, fish, benthos, algae and microbes, which is an important marine ecosystem. Coral reef lives in the oligotrophic environment, has very highly primary productivity and net productivity, and is called "tropical rain forest in ocean". In corals, diverse microorganisms exert a significant influence on biogeochemical and ecological processes, including food webs, organism life cycles, and nutrient cycling. With the development of molecular biology, the role of microorganisms in a coral system is becoming more outstanding. In this article, we reviewed current understanding on 1) the onset of coral-bacterial associations; 2) the characteristics of microbes in coral (specificity, plasticity and co-evolution) ; 3) the role and signal regulation of microbes in the health and disease of coral; and 4) the response mechanism of microbes for global climatic change and consequent effects, such as temperature rise, ocean acidification and eutrophication. The aims of this article were to summarize the latest theories and achievements, clear the mechanism of microbial ecology in coral reefs and provide a theoretical reference for better protection and maintaining the coral's biodiversity.

  3. Social interactions among grazing reef fish drive material flux in a coral reef ecosystem.

    PubMed

    Gil, Michael A; Hein, Andrew M

    2017-05-02

    In human financial and social systems, exchanges of information among individuals cause speculative bubbles, behavioral cascades, and other correlated actions that profoundly influence system-level function. Exchanges of information are also widespread in ecological systems, but their effects on ecosystem-level processes are largely unknown. Herbivory is a critical ecological process in coral reefs, where diverse assemblages of fish maintain reef health by controlling the abundance of algae. Here, we show that social interactions have a major effect on fish grazing rates in a reef ecosystem. We combined a system for observing and manipulating large foraging areas in a coral reef with a class of dynamical decision-making models to reveal that reef fish use information about the density and actions of nearby fish to decide when to feed on algae and when to flee foraging areas. This "behavioral coupling" causes bursts of feeding activity that account for up to 68% of the fish community's consumption of algae. Moreover, correlations in fish behavior induce a feedback, whereby each fish spends less time feeding when fewer fish are present, suggesting that reducing fish stocks may not only reduce total algal consumption but could decrease the amount of algae each remaining fish consumes. Our results demonstrate that social interactions among consumers can have a dominant effect on the flux of energy and materials through ecosystems, and our methodology paves the way for rigorous in situ measurements of the behavioral rules that underlie ecological rates in other natural systems.

  4. Coral mucus functions as an energy carrier and particle trap in the reef ecosystem.

    PubMed

    Wild, Christian; Huettel, Markus; Klueter, Anke; Kremb, Stephan G; Rasheed, Mohammed Y M; Jørgensen, Bo B

    2004-03-04

    Zooxanthellae, endosymbiotic algae of reef-building corals, substantially contribute to the high gross primary production of coral reefs, but corals exude up to half of the carbon assimilated by their zooxanthellae as mucus. Here we show that released coral mucus efficiently traps organic matter from the water column and rapidly carries energy and nutrients to the reef lagoon sediment, which acts as a biocatalytic mineralizing filter. In the Great Barrier Reef, the dominant genus of hard corals, Acropora, exudes up to 4.8 litres of mucus per square metre of reef area per day. Between 56% and 80% of this mucus dissolves in the reef water, which is filtered through the lagoon sands. Here, coral mucus is degraded at a turnover rate of at least 7% per hour. Detached undissolved mucus traps suspended particles, increasing its initial organic carbon and nitrogen content by three orders of magnitude within 2 h. Tidal currents concentrate these mucus aggregates into the lagoon, where they rapidly settle. Coral mucus provides light energy harvested by the zooxanthellae and trapped particles to the heterotrophic reef community, thereby establishing a recycling loop that supports benthic life, while reducing loss of energy and nutrients from the reef ecosystem.

  5. Economic valuation of ecosystem services from coral reefs in the South Pacific: taking stock of recent experience.

    PubMed

    Laurans, Yann; Pascal, Nicolas; Binet, Thomas; Brander, Luke; Clua, Eric; David, Gilbert; Rojat, Dominique; Seidl, Andrew

    2013-02-15

    The economic valuation of coral reefs ecosystem services is currently seen as a promising approach to demonstrate the benefits of sustainable management of coral ecosystems to policymakers and to provide useful information for improved decisions. Most coral reefs economic studies have been conducted in the United States, Southeast Asia and the Caribbean, and only a few have covered the South Pacific region. In this region, coral reefs are essential assets for small island developing states as well as for developed countries. Accordingly, a series of ecosystem services valuations has been carried out recently in the South Pacific, to try and supply decision-makers with new information. Applying ecosystem services valuation to the specific ecological, social, economic and cultural contexts of the South Pacific is however not straightforward. This paper analyses how extant valuations address the various management challenges of coral reef regions in general and more specifically for the South Pacific. Bearing in mind that economic valuation has to match policy-making contexts, we emphasize a series of specific considerations when conducting and applying ecosystem services valuation in South Pacific ecological and social contexts. Finally, the paper examines the decision-making situations in which extant valuations took place. We conclude that, although ecosystem valuations have been effectively used as a means to raise awareness with respect to coral reef conservation, methodologies will have to be further developed, with multidisciplinary inputs, if they are to provide valuable inputs in local and technical decision-making. Copyright © 2012 Elsevier Ltd. All rights reserved.

  6. Environmental quality and preservation; reefs, corals, and carbonate sands; guides to reef-ecosystem health and environment

    USGS Publications Warehouse

    Lidz, Barbara H.

    2001-01-01

    Introduction In recent years, the health of the entire coral reef ecosystem that lines the outer shelf off the Florida Keys has declined markedly. In particular, loss of those coral species that are the building blocks of solid reef framework has significant negative implications for economic vitality of the region. What are the reasons for this decline? Is it due to natural change, or are human activities (recreational diving, ship groundings, farmland runoff, nutrient influx, air-borne contaminants, groundwater pollutants) a contributing factor and if so, to what extent? At risk of loss are biologic resources of the reefs, including habitats for endangered species in shoreline mangroves, productive marine and wetland nurseries, and economic fisheries. A healthy reef ecosystem builds a protective offshore barrier to catastrophic wave action and storm surges generated by tropical storms and hurricanes. In turn, a healthy reef protects the homes, marinas, and infrastructure on the Florida Keys that have been designed to capture a lucrative tourism industry. A healthy reef ecosystem also protects inland agricultural and livestock areas of South Florida whose produce and meat feed much of the United States and other parts of the world. In cooperation with the National Oceanic and Atmospheric Administration's (NOAA) National Marine Sanctuary Program, the U.S. Geological Survey (USGS) continues longterm investigations of factors that may affect Florida's reefs. One of the first steps in distinguishing between natural change and the effects of human activities, however, is to determine how coral reefs have responded to past environmental change, before the advent of man. By so doing, accurate scientific information becomes available for Marine Sanctuary management to understand natural change and thus to assess and regulate potential human impact better. The USGS studies described here evaluate the distribution (location) and historic vitality (thickness) of Holocene

  7. A Decision Support System for Ecosystem-Based Management of Tropical Coral Reef Environments

    NASA Astrophysics Data System (ADS)

    Muller-Karger, F. E.; Eakin, C.; Guild, L. S.; Nemani, R. R.; Hu, C.; Lynds, S. E.; Li, J.; Vega-Rodriguez, M.; Coral Reef Watch Decision Support System Team

    2010-12-01

    We review a new collaborative program established between the National Aeronautics and Space Administration (NASA) and the National Oceanic and Atmospheric Administration (NOAA) to augment the NOAA Coral Reef Watch decision-support system. NOAA has developed a Decision Support System (DSS) under the Coral Reef Watch (CRW) program to forecast environmental stress in coral reef ecosystems around the world. This DSS uses models and 50 km Advanced Very High Resolution Radiometer (AVHRR) to generate “HotSpot” and Degree Heating Week coral bleaching indices. These are used by scientists and resource managers around the world. These users, including National Marine Sanctuary managers, have expressed the need for higher spatial resolution tools to understand local issues. The project will develop a series of coral bleaching products at higher spatial resolution using Moderate Resolution Imaging Spectroradiometer (MODIS) and AVHRR data. We will generate and validate products at 1 km resolution for the Caribbean Sea and Gulf of Mexico, and test global assessments at 4 and 50 km. The project will also incorporate the Global Coral Reef Millennium Map, a 30-m resolution thematic classification of coral reefs developed by the NASA Landsat-7 Science Team, into the CRW. The Millennium Maps help understand the geomorphology of individual reefs around the world. The products will be available through the NOAA CRW and UNEP-WCMC web portals. The products will help users formulate policy options and management decisions. The augmented DSS has a global scope, yet it addresses the needs of local resource managers. The work complements efforts to map and monitor coral reef communities in the U.S. territories by NOAA, NASA, and the USGS, and is a contribution to international efforts in ecological forecasting of coral reefs under changing environments, coral reef research, resource management, and conservation. Acknowledgement: Funding is provided by the NASA Ecological Forecasting

  8. New directions in coral reef microbial ecology.

    PubMed

    Garren, Melissa; Azam, Farooq

    2012-04-01

    Microbial processes largely control the health and resilience of coral reef ecosystems, and new technologies have led to an exciting wave of discovery regarding the mechanisms by which microbial communities support the functioning of these incredibly diverse and valuable systems. There are three questions at the forefront of discovery: What mechanisms underlie coral reef health and resilience? How do environmental and anthropogenic pressures affect ecosystem function? What is the ecology of microbial diseases of corals? The goal is to understand the functioning of coral reefs as integrated systems from microbes and molecules to regional and ocean-basin scale ecosystems to enable accurate predictions of resilience and responses to perturbations such as climate change and eutrophication. This review outlines recent discoveries regarding the microbial ecology of different microenvironments within coral ecosystems, and highlights research directions that take advantage of new technologies to build a quantitative and mechanistic understanding of how coral health is connected through microbial processes to its surrounding environment. The time is ripe for natural resource managers and microbial ecologists to work together to create an integrated understanding of coral reef functioning. In the context of long-term survival and conservation of reefs, the need for this work is immediate. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

  9. Shifting paradigms in restoration of the world's coral reefs.

    PubMed

    van Oppen, Madeleine J H; Gates, Ruth D; Blackall, Linda L; Cantin, Neal; Chakravarti, Leela J; Chan, Wing Y; Cormick, Craig; Crean, Angela; Damjanovic, Katarina; Epstein, Hannah; Harrison, Peter L; Jones, Thomas A; Miller, Margaret; Pears, Rachel J; Peplow, Lesa M; Raftos, David A; Schaffelke, Britta; Stewart, Kristen; Torda, Gergely; Wachenfeld, David; Weeks, Andrew R; Putnam, Hollie M

    2017-09-01

    Many ecosystems around the world are rapidly deteriorating due to both local and global pressures, and perhaps none so precipitously as coral reefs. Management of coral reefs through maintenance (e.g., marine-protected areas, catchment management to improve water quality), restoration, as well as global and national governmental agreements to reduce greenhouse gas emissions (e.g., the 2015 Paris Agreement) is critical for the persistence of coral reefs. Despite these initiatives, the health and abundance of corals reefs are rapidly declining and other solutions will soon be required. We have recently discussed options for using assisted evolution (i.e., selective breeding, assisted gene flow, conditioning or epigenetic programming, and the manipulation of the coral microbiome) as a means to enhance environmental stress tolerance of corals and the success of coral reef restoration efforts. The 2014-2016 global coral bleaching event has sharpened the focus on such interventionist approaches. We highlight the necessity for consideration of alternative (e.g., hybrid) ecosystem states, discuss traits of resilient corals and coral reef ecosystems, and propose a decision tree for incorporating assisted evolution into restoration initiatives to enhance climate resilience of coral reefs. © 2017 John Wiley & Sons Ltd.

  10. Informing policy to protect coastal coral reefs: insight from a global review of reducing agricultural pollution to coastal ecosystems.

    PubMed

    Kroon, Frederieke J; Schaffelke, Britta; Bartley, Rebecca

    2014-08-15

    The continuing degradation of coral reefs has serious consequences for the provision of ecosystem goods and services to local and regional communities. While climate change is considered the most serious risk to coral reefs, agricultural pollution threatens approximately 25% of the total global reef area with further increases in sediment and nutrient fluxes projected over the next 50 years. Here, we aim to inform coral reef management using insights learned from management examples that were successful in reducing agricultural pollution to coastal ecosystems. We identify multiple examples reporting reduced fluxes of sediment and nutrients at end-of-river, and associated declines in nutrient concentrations and algal biomass in receiving coastal waters. Based on the insights obtained, we recommend that future protection of coral reef ecosystems demands policy focused on desired ecosystem outcomes, targeted regulatory approaches, up-scaling of watershed management, and long-term maintenance of scientifically robust monitoring programs linked with adaptive management. Crown Copyright © 2014. Published by Elsevier Ltd. All rights reserved.

  11. Devising a Coral Reef Ocean Acidification Monitoring Portfolio

    NASA Astrophysics Data System (ADS)

    Gledhill, D. K.; Jewett, L.

    2012-12-01

    Coral reef monitoring has frequently been based only on descriptive science with limited capacity to assign specific attribution to agents of change. There is a requirement to engineer a diagnostic monitoring approach that can test predictions regarding the response of coral reef ecosystems to ocean acidification, and to identify potential areas of refugia or areas of particular concern. The approach should provide the means to detect not only changes in water chemistry but also changes in coral reef community structure and function which can be anticipated based upon our current understanding of paleo-OA events, experimental findings, process investigations, and modeling projections In August, 2012 a Coral Reef Ocean Acidification Monitoring Portfolio Workshop was hosted by the NOAA Ocean Acidification Program and the National Coral Reef Institute at the Nova Southeastern University Oceanographic Center. The workshop convened researchers and project managers from around the world engaged in coral reef ecosystems ocean acidification monitoring and research. The workshop sought to define a suite of metrics to include as part of long-term coral reef monitoring efforts that can contribute to discerning specific attribution of changes in coral reef ecosystems in response to ocean acidification. This portfolio of observations should leverage existing and proposed monitoring initiatives and would be derived from a suite of chemical, biogeochemical and ecological measurements. This talk will report out on the key findings from the workshop which should include identifying the most valuable that should be integrated into long-term coral reef ecosystem monitoring that will aid in discerning changes in coral reef ecosystems in response to ocean acidification. The outcomes should provide: recommendations of the most efficient and robust ways to monitor these metrics; identified augmentations that would be required to current ocean acidification monitoring necessary to achieve

  12. Fishing down nutrients on coral reefs.

    PubMed

    Allgeier, Jacob E; Valdivia, Abel; Cox, Courtney; Layman, Craig A

    2016-08-16

    Fishing is widely considered a leading cause of biodiversity loss in marine environments, but the potential effect on ecosystem processes, such as nutrient fluxes, is less explored. Here, we test how fishing on Caribbean coral reefs influences biodiversity and ecosystem functions provided by the fish community, that is, fish-mediated nutrient capacity. Specifically, we modelled five processes of nutrient storage (in biomass) and supply (via excretion) of nutrients, as well as a measure of their multifunctionality, onto 143 species of coral reef fishes across 110 coral reef fish communities. These communities span a gradient from extreme fishing pressure to protected areas with little to no fishing. We find that in fished sites fish-mediated nutrient capacity is reduced almost 50%, despite no substantial changes in the number of species. Instead, changes in community size and trophic structure were the primary cause of shifts in ecosystem function. These findings suggest that a broader perspective that incorporates predictable impacts of fishing pressure on ecosystem function is imperative for effective coral reef conservation and management.

  13. Anticipative management for coral reef ecosystem services in the 21st century.

    PubMed

    Rogers, Alice; Harborne, Alastair R; Brown, Christopher J; Bozec, Yves-Marie; Castro, Carolina; Chollett, Iliana; Hock, Karlo; Knowland, Cheryl A; Marshell, Alyssa; Ortiz, Juan C; Razak, Tries; Roff, George; Samper-Villarreal, Jimena; Saunders, Megan I; Wolff, Nicholas H; Mumby, Peter J

    2015-02-01

    Under projections of global climate change and other stressors, significant changes in the ecology, structure and function of coral reefs are predicted. Current management strategies tend to look to the past to set goals, focusing on halting declines and restoring baseline conditions. Here, we explore a complementary approach to decision making that is based on the anticipation of future changes in ecosystem state, function and services. Reviewing the existing literature and utilizing a scenario planning approach, we explore how the structure of coral reef communities might change in the future in response to global climate change and overfishing. We incorporate uncertainties in our predictions by considering heterogeneity in reef types in relation to structural complexity and primary productivity. We examine 14 ecosystem services provided by reefs, and rate their sensitivity to a range of future scenarios and management options. Our predictions suggest that the efficacy of management is highly dependent on biophysical characteristics and reef state. Reserves are currently widely used and are predicted to remain effective for reefs with high structural complexity. However, when complexity is lost, maximizing service provision requires a broader portfolio of management approaches, including the provision of artificial complexity, coral restoration, fish aggregation devices and herbivore management. Increased use of such management tools will require capacity building and technique refinement and we therefore conclude that diversification of our management toolbox should be considered urgently to prepare for the challenges of managing reefs into the 21st century. © 2014 John Wiley & Sons Ltd.

  14. Functionally diverse reef-fish communities ameliorate coral disease.

    PubMed

    Raymundo, Laurie J; Halford, Andrew R; Maypa, Aileen P; Kerr, Alexander M

    2009-10-06

    Coral reefs, the most diverse of marine ecosystems, currently experience unprecedented levels of degradation. Diseases are now recognized as a major cause of mortality in reef-forming corals and are complicit in phase shifts of reef ecosystems to algal-dominated states worldwide. Even so, factors contributing to disease occurrence, spread, and impact remain poorly understood. Ecosystem resilience has been linked to the conservation of functional diversity, whereas overfishing reduces functional diversity through cascading, top-down effects. Hence, we tested the hypothesis that reefs with trophically diverse reef fish communities have less coral disease than overfished reefs. We surveyed reefs across the central Philippines, including well-managed marine protected areas (MPAs), and found that disease prevalence was significantly negatively correlated with fish taxonomic diversity. Further, MPAs had significantly higher fish diversity and less disease than unprotected areas. We subsequently investigated potential links between coral disease and the trophic components of fish diversity, finding that only the density of coral-feeding chaetodontid butterflyfishes, seldom targeted by fishers, was positively associated with disease prevalence. These previously uncharacterized results are supported by a second large-scale dataset from the Great Barrier Reef. We hypothesize that members of the charismatic reef-fish family Chaetodontidae are major vectors of coral disease by virtue of their trophic specialization on hard corals and their ecological release in overfished areas, particularly outside MPAs.

  15. Community structure and coral status across reef fishing intensity gradients in Palk Bay reef, southeast coast of India.

    PubMed

    Manikandan, B; Ravindran, J; Shrinivaasu, S; Marimuthu, N; Paramasivam, K

    2014-10-01

    Coral reef fishes are exploited without the knowledge of their sustainability and their possible effect in altering the community structure of a coral reef ecosystem. Alteration of the community structure could cause a decline in the health of coral reefs and its services. We documented the coral community structure, status of live corals and reef fish assemblages in Palk Bay at the reef fishing hotspots and its nearby reef area with minimum fishing pressure and compared it with a control reef area where reef fishing was banned for more than two decades. The comparison was based on the percent cover of different forms of live corals, their diversity and the density and diversity of reef fishes. The reef fish stock in the reef fishing hotspots and its neighbouring reef was lower by 61 and 38%, respectively compared to the control reef. The herbivore fish Scarus ghobban and Siganus javus were exploited at a rate of 250 and 105 kg month(-1) fishermen(-1), respectively, relatively high comparing the small reef area. Live and dead corals colonized by turf algae were predominant in both the reef fishing hotspots and its nearby coral ecosystems. The percent cover of healthy live corals and live corals colonized by turf algae was <10 and >80%, respectively, in the intensively fished coral ecosystems. The corals were less diverse and the massive Porites and Favia colonies were abundant in the intensive reef fishing sites. Results of this study suggest that the impact of reef fish exploitation was not solely restricted to the intensively fished reefs, but also to the nearby reefs which play a critical role in the resilience of degraded reef ecosystems.

  16. Holocene key coral species in the Northwest Pacific: indicators of reef formation and reef ecosystem responses to global climate change and anthropogenic stresses in the near future

    NASA Astrophysics Data System (ADS)

    Hongo, Chuki

    2012-03-01

    The geological record of key coral species that contribute to reef formation and maintenance of reef ecosystems is important for understanding the ecosystem response to global-scale climate change and anthropogenic stresses in the near future. Future responses can be predicted from accumulated data on Holocene reef species identified in drillcore and from data on raised reef terraces. The present study analyzes a dataset based on 27 drillcores, raised reef terraces, and 134 radiocarbon and U-Th ages from reefs of the Northwest Pacific, with the aim of examining the role of key coral species in reef growth and maintenance for reef ecosystem during Holocene sea-level change. The results indicate a latitudinal change in key coral species: arborescent Acropora (Acropora intermedia and Acropora muricata) was the dominant reef builder at reef crests in the tropics, whereas Porites (Porites australiensis, Porites lutea, and Porites lobata) was the dominant contributor to reef growth in the subtropics between 10,000 and 7000 cal. years BP (when the rate of sea-level rise was 10 m/ka). Acropora digitifera, Acropora hyacinthus, Acropora robusta/A. abrotanoides, Isopora palifera, Favia stelligera, and Goniastrea retiformis from the corymbose and tabular Acropora facies were the main key coral species at reef crests between 7000 and 5000 cal. years BP (when the rate of sea-level rise was 5 m/ka) and during the following period of stable sea-level. Massive Porites (P. australiensis, P. lutea, and P. lobata) contributed to reef growth in shallow lagoons during the period of stable sea level. Key coral species from the corymbose and tabular Acropora facies have the potential to build reefs and maintain ecosystems in the near future under a global sea-level rise of 2-6 m/ka, as do key coral species from the arborescent Acropora facies and massive Porites facies, which show vigorous growth and are tolerant to relatively deep-water, low-energy environments. However, these species

  17. Coral Reef Remote Sensing: Helping Managers Protect Reefs in a Changing Climate

    NASA Astrophysics Data System (ADS)

    Eakin, C.; Liu, G.; Li, J.; Muller-Karger, F. E.; Heron, S. F.; Gledhill, D. K.; Christensen, T.; Rauenzahn, J.; Morgan, J.; Parker, B. A.; Skirving, W. J.; Nim, C.; Burgess, T.; Strong, A. E.

    2010-12-01

    Climate change and ocean acidification are already having severe impacts on coral reef ecosystems. Warming oceans have caused corals to bleach, or expel their symbiotic algae (zooxanthellae) with alarming frequency and severity and have contributed to a rise in coral infectious diseases. Ocean acidification is reducing the availability of carbonate ions needed by corals and many other marine organisms to build structural components like skeletons and shells and may already be slowing the coral growth. These two impacts are already killing corals and slowing reef growth, reducing biodiversity and the structure needed to provide crucial ecosystem services. NOAA’s Coral Reef Watch (CRW) uses a combination of satellite data, in situ observations, and models to provide coral reef managers, scientists, and others with information needed to monitor threats to coral reefs. The advance notice provided by remote sensing and models allows resource managers to protect corals, coral reefs, and the services they provide, although managers often encounter barriers to implementation of adaptation strategies. This talk will focus on application of NOAA’s satellite and model-based tools that monitor the risk of mass coral bleaching on a global scale, ocean acidification in the Caribbean, and coral disease outbreaks in selected regions, as well as CRW work to train managers in their use, and barriers to taking action to adapt to climate change. As both anthropogenic CO2 and temperatures will continue to rise, local actions to protect reefs are becoming even more important.

  18. Nutrient pollution disrupts key ecosystem functions on coral reefs.

    PubMed

    Silbiger, Nyssa J; Nelson, Craig E; Remple, Kristina; Sevilla, Jessica K; Quinlan, Zachary A; Putnam, Hollie M; Fox, Michael D; Donahue, Megan J

    2018-06-13

    There is a long history of examining the impacts of nutrient pollution and pH on coral reefs. However, little is known about how these two stressors interact and influence coral reef ecosystem functioning. Using a six-week nutrient addition experiment, we measured the impact of elevated nitrate (NO - 3 ) and phosphate (PO 3- 4 ) on net community calcification (NCC) and net community production (NCP) rates of individual taxa and combined reef communities. Our study had four major outcomes: (i) NCC rates declined in response to nutrient addition in all substrate types, (ii) the mixed community switched from net calcification to net dissolution under medium and high nutrient conditions, (iii) nutrients augmented pH variability through modified photosynthesis and respiration rates, and (iv) nutrients disrupted the relationship between NCC and aragonite saturation state documented in ambient conditions. These results indicate that the negative effect of NO - 3 and PO 3- 4 addition on reef calcification is likely both a direct physiological response to nutrients and also an indirect response to a shifting pH environment from altered NCP rates. Here, we show that nutrient pollution could make reefs more vulnerable to global changes associated with ocean acidification and accelerate the predicted shift from net accretion to net erosion. © 2018 The Author(s).

  19. Coral reef resilience through biodiversity

    USGS Publications Warehouse

    Rogers, Caroline S.

    2013-01-01

    Irrefutable evidence of coral reef degradation worldwide and increasing pressure from rising seawater temperatures and ocean acidification associated with climate change have led to a focus on reef resilience and a call to “manage” coral reefs for resilience. Ideally, global action to reduce emission of carbon dioxide and other greenhouse gases will be accompanied by local action. Effective management requires reduction of local stressors, identification of the characteristics of resilient reefs, and design of marine protected area networks that include potentially resilient reefs. Future research is needed on how stressors interact, on how climate change will affect corals, fish, and other reef organisms as well as overall biodiversity, and on basic ecological processes such as connectivity. Not all reef species and reefs will respond similarly to local and global stressors. Because reef-building corals and other organisms have some potential to adapt to environmental changes, coral reefs will likely persist in spite of the unprecedented combination of stressors currently affecting them. The biodiversity of coral reefs is the basis for their remarkable beauty and for the benefits they provide to society. The extraordinary complexity of these ecosystems makes it both more difficult to predict their future and more likely they will have a future.

  20. Florida Integrated Science Center (FISC) Coral Reef Research

    USGS Publications Warehouse

    Poore, D.Z.

    2008-01-01

    Coral reefs provide important ecosystem services such as shoreline protection and the support of lucrative industries including fisheries and tourism. Such ecosystem services are being compromised as reefs decline due to coral disease, climate change, overfishing, and pollution. There is a need for focused, integrated science to understand the complex ecological interactions and effects of these many stressors and to provide information that will effectively guide policies and best management practices to preserve and restore these important resources. The U.S. Geological Survey Florida Integrated Science Center (USGS-FISC) is conducting a coordinated Coral Reef Research Project beginning in 2009. Specific research topics are aimed at addressing priorities identified in the 'Strategic Science for Coral Ecosystems 2007-2011' document (U.S. Geological Survey, 2007). Planned research will include a blend of historical, monitoring, and process studies aimed at improving our understanding of the development, current status and function, and likely future changes in coral ecosystems. Topics such as habitat characterization and distribution, coral disease, and trends in biogenic calcification are major themes of understanding reef structure, ecological integrity, and responses to global change.

  1. Volcanic Acidification of a Coral Reef at Maug Island: Influences on Biological Processes and Ecosystem Structure

    NASA Astrophysics Data System (ADS)

    Enochs, I.; Manzello, D.; Donham, E. M.; Johnston, L.; Valentino, L.; Young, C.; Kolodziej, G.; Carlton, R.; Price, N.

    2016-02-01

    Coral reef ecosystems are expected to be strongly impacted by ocean acidification (OA) in the coming century. The influences of OA on coral reefs will be numerous, involving diverse species with different degrees of susceptibility. Naturally acidified systems provide a way to study these individual responses and a means to investigate how myriad alterations manifest at the ecosystem-scale over long periods of time. To this end, we characterized the unique coral reef ecosystem surrounding the volcanic carbon dioxide vent at Maug Island in the Commonwealth of the Northern Mariana Islands (CNMI). We present data on the spatial extent of carbonate chemistry alteration through interpolation of water bottle samples, and data on the temporal nature of this gradient through the deployment of three SeaFET pH loggers over a period of three months. We analyze trace-gas concentrations and characterize fluctuations in light, current, tides, and temperature. We tie these environmental data to high-resolution photo mosaics and in situ biodiversity surveys to examine changes in reef community structure correlated with this natural OA gradient. Finally, we investigate the influence of vent proximity on biological processes affecting reef habitat growth and erosion. Using computed tomography (CT) and analysis of coral growth bands, we analyze changes in the calcification of massive Porites coral. Using crystalline calcium carbonate (calcite) blocks, we quantify the settlement and erosion rate of microboring algae. Together these measurements underscore the strong influence that OA will have on reef persistence and highlight the value of the Maug site for future OA research.

  2. Insights into the Coral Microbiome: Underpinning the Health and Resilience of Reef Ecosystems.

    PubMed

    Bourne, David G; Morrow, Kathleen M; Webster, Nicole S

    2016-09-08

    Corals are fundamental ecosystem engineers, creating large, intricate reefs that support diverse and abundant marine life. At the core of a healthy coral animal is a dynamic relationship with microorganisms, including a mutually beneficial symbiosis with photosynthetic dinoflagellates (Symbiodinium spp.) and enduring partnerships with an array of bacterial, archaeal, fungal, protistan, and viral associates, collectively termed the coral holobiont. The combined genomes of this coral holobiont form a coral hologenome, and genomic interactions within the hologenome ultimately define the coral phenotype. Here we integrate contemporary scientific knowledge regarding the ecological, host-specific, and environmental forces shaping the diversity, specificity, and distribution of microbial symbionts within the coral holobiont, explore physiological pathways that contribute to holobiont fitness, and describe potential mechanisms for holobiont homeostasis. Understanding the role of the microbiome in coral resilience, acclimation, and environmental adaptation is a new frontier in reef science that will require large-scale collaborative research efforts.

  3. Predicting climate-driven regime shifts versus rebound potential in coral reefs.

    PubMed

    Graham, Nicholas A J; Jennings, Simon; MacNeil, M Aaron; Mouillot, David; Wilson, Shaun K

    2015-02-05

    Climate-induced coral bleaching is among the greatest current threats to coral reefs, causing widespread loss of live coral cover. Conditions under which reefs bounce back from bleaching events or shift from coral to algal dominance are unknown, making it difficult to predict and plan for differing reef responses under climate change. Here we document and predict long-term reef responses to a major climate-induced coral bleaching event that caused unprecedented region-wide mortality of Indo-Pacific corals. Following loss of >90% live coral cover, 12 of 21 reefs recovered towards pre-disturbance live coral states, while nine reefs underwent regime shifts to fleshy macroalgae. Functional diversity of associated reef fish communities shifted substantially following bleaching, returning towards pre-disturbance structure on recovering reefs, while becoming progressively altered on regime shifting reefs. We identified threshold values for a range of factors that accurately predicted ecosystem response to the bleaching event. Recovery was favoured when reefs were structurally complex and in deeper water, when density of juvenile corals and herbivorous fishes was relatively high and when nutrient loads were low. Whether reefs were inside no-take marine reserves had no bearing on ecosystem trajectory. Although conditions governing regime shift or recovery dynamics were diverse, pre-disturbance quantification of simple factors such as structural complexity and water depth accurately predicted ecosystem trajectories. These findings foreshadow the likely divergent but predictable outcomes for reef ecosystems in response to climate change, thus guiding improved management and adaptation.

  4. Thinking and managing outside the box: coalescing connectivity networks to build region-wide resilience in coral reef ecosystems

    NASA Astrophysics Data System (ADS)

    Steneck, R. S.; Paris, C. B.; Arnold, S. N.; Ablan-Lagman, M. C.; Alcala, A. C.; Butler, M. J.; McCook, L. J.; Russ, G. R.; Sale, P. F.

    2009-06-01

    As the science of connectivity evolves, so too must the management of coral reefs. It is now clear that the spatial scale of disturbances to coral reef ecosystems is larger and the scale of larval connectivity is smaller than previously thought. This poses a challenge to the current focus of coral reef management, which often centers on the establishment of no-take reserves (NTRs) that in practice are often too small, scattered, or have low stakeholder compliance. Fished species are generally larger and more abundant in protected reserves, where their reproductive potential is often greater, yet documented demographic benefits of these reproductive gains outside reserves are modest at best. Small reproductive populations and limited dispersal of larvae play a role, as does the diminished receptivity to settling larvae of degraded habitats that can limit recruitment by more than 50%. For “demographic connectivity” to contribute to the resilience of coral reefs, it must function beyond the box of no-take reserves. Specifically, it must improve nursery habitats on or near reefs and enhance the reproductive output of ecologically important species throughout coral reef ecosystems. Special protection of ecologically important species (e.g., some herbivores in the Caribbean) and size-regulated fisheries that capitalize on the benefits of NTRs and maintain critical ecological functions are examples of measures that coalesce marine reserve effects and improve the resilience of coral reef ecosystems. Important too is the necessity of local involvement in the management process so that social costs and benefits are properly assessed, compliance increased and success stories accrued.

  5. Coral reefs in the Anthropocene.

    PubMed

    Hughes, Terry P; Barnes, Michele L; Bellwood, David R; Cinner, Joshua E; Cumming, Graeme S; Jackson, Jeremy B C; Kleypas, Joanie; van de Leemput, Ingrid A; Lough, Janice M; Morrison, Tiffany H; Palumbi, Stephen R; van Nes, Egbert H; Scheffer, Marten

    2017-05-31

    Coral reefs support immense biodiversity and provide important ecosystem services to many millions of people. Yet reefs are degrading rapidly in response to numerous anthropogenic drivers. In the coming centuries, reefs will run the gauntlet of climate change, and rising temperatures will transform them into new configurations, unlike anything observed previously by humans. Returning reefs to past configurations is no longer an option. Instead, the global challenge is to steer reefs through the Anthropocene era in a way that maintains their biological functions. Successful navigation of this transition will require radical changes in the science, management and governance of coral reefs.

  6. Global warming transforms coral reef assemblages.

    PubMed

    Hughes, Terry P; Kerry, James T; Baird, Andrew H; Connolly, Sean R; Dietzel, Andreas; Eakin, C Mark; Heron, Scott F; Hoey, Andrew S; Hoogenboom, Mia O; Liu, Gang; McWilliam, Michael J; Pears, Rachel J; Pratchett, Morgan S; Skirving, William J; Stella, Jessica S; Torda, Gergely

    2018-04-01

    Global warming is rapidly emerging as a universal threat to ecological integrity and function, highlighting the urgent need for a better understanding of the impact of heat exposure on the resilience of ecosystems and the people who depend on them 1 . Here we show that in the aftermath of the record-breaking marine heatwave on the Great Barrier Reef in 2016 2 , corals began to die immediately on reefs where the accumulated heat exposure exceeded a critical threshold of degree heating weeks, which was 3-4 °C-weeks. After eight months, an exposure of 6 °C-weeks or more drove an unprecedented, regional-scale shift in the composition of coral assemblages, reflecting markedly divergent responses to heat stress by different taxa. Fast-growing staghorn and tabular corals suffered a catastrophic die-off, transforming the three-dimensionality and ecological functioning of 29% of the 3,863 reefs comprising the world's largest coral reef system. Our study bridges the gap between the theory and practice of assessing the risk of ecosystem collapse, under the emerging framework for the International Union for Conservation of Nature (IUCN) Red List of Ecosystems 3 , by rigorously defining both the initial and collapsed states, identifying the major driver of change, and establishing quantitative collapse thresholds. The increasing prevalence of post-bleaching mass mortality of corals represents a radical shift in the disturbance regimes of tropical reefs, both adding to and far exceeding the influence of recurrent cyclones and other local pulse events, presenting a fundamental challenge to the long-term future of these iconic ecosystems.

  7. Climate-Smart Design for Ecosystem Management: A Test Application for Coral Reefs.

    PubMed

    West, Jordan M; Courtney, Catherine A; Hamilton, Anna T; Parker, Britt A; Julius, Susan H; Hoffman, Jennie; Koltes, Karen H; MacGowan, Petra

    2017-01-01

    The interactive and cumulative impacts of climate change on natural resources such as coral reefs present numerous challenges for conservation planning and management. Climate change adaptation is complex due to climate-stressor interactions across multiple spatial and temporal scales. This leaves decision makers worldwide faced with local, regional, and global-scale threats to ecosystem processes and services, occurring over time frames that require both near-term and long-term planning. Thus there is a need for structured approaches to adaptation planning that integrate existing methods for vulnerability assessment with design and evaluation of effective adaptation responses. The Corals and Climate Adaptation Planning project of the U.S. Coral Reef Task Force seeks to develop guidance for improving coral reef management through tailored application of a climate-smart approach. This approach is based on principles from a recently-published guide which provides a framework for adopting forward-looking goals, based on assessing vulnerabilities to climate change and applying a structured process to design effective adaptation strategies. Work presented in this paper includes: (1) examination of the climate-smart management cycle as it relates to coral reefs; (2) a compilation of adaptation strategies for coral reefs drawn from a comprehensive review of the literature; (3) in-depth demonstration of climate-smart design for place-based crafting of robust adaptation actions; and (4) feedback from stakeholders on the perceived usefulness of the approach. We conclude with a discussion of lessons-learned on integrating climate-smart design into real-world management planning processes and a call from stakeholders for an "adaptation design tool" that is now under development.

  8. Workshop on Biological Integrity of Coral Reefs August 21-22 ...

    EPA Pesticide Factsheets

    This report summarizes an EPA-sponsored workshop on coral reef biological integrity held at the Caribbean Coral Reef Institute in La Parguera, Puerto Rico on August 21-22, 2012. The goals of this workshop were to:• Identify key qualitative and quantitative ecological characteristics (reef attributes) that determine the condition of linear coral reefs inhabiting shallow waters (<12 m) in southwestern Puerto Rico.• Use those reef attributes to recommend categorical condition rankings for establishing a biological condition gradient.• Ascertain through expert consensus those reef attributes that characterize biological integrity (a natural, fully-functioning system of organisms and communities) for coral reefs. • Develop a conceptual, narrative model that describes how biological attributes of coral reefs change along a gradient of increasing anthropogenic stress.The workshop brought together scientists with expertise in coral reef taxonomic groups (e.g., stony corals, fishes, sponges, gorgonians, algae, seagrasses and macroinvertebrates), as well as community structure, organism condition, ecosystem function and ecosystem connectivity. The experts evaluated photos and videos from 12 stations collected during EPA Coral Reef surveys (2010 & 2011) from Puerto Rico on coral reefs exhibiting a wide range of conditions. The experts individually rated each station as to observed condition (“good”, “fair” or “poor”) and documented their rationale for

  9. Comparison of Coral Reef Ecosystems along a Fishing Pressure Gradient

    PubMed Central

    Weijerman, Mariska; Fulton, Elizabeth A.; Parrish, Frank A.

    2013-01-01

    Three trophic mass-balance models representing coral reef ecosystems along a fishery gradient were compared to evaluate ecosystem effects of fishing. The majority of the biomass estimates came directly from a large-scale visual survey program; therefore, data were collected in the same way for all three models, enhancing comparability. Model outputs–such as net system production, size structure of the community, total throughput, production, consumption, production-to-respiration ratio, and Finn’s cycling index and mean path length–indicate that the systems around the unpopulated French Frigate Shoals and along the relatively lightly populated Kona Coast of Hawai’i Island are mature, stable systems with a high efficiency in recycling of biomass. In contrast, model results show that the reef system around the most populated island in the State of Hawai’i, O’ahu, is in a transitional state with reduced ecosystem resilience and appears to be shifting to an algal-dominated system. Evaluation of the candidate indicators for fishing pressure showed that indicators at the community level (e.g., total biomass, community size structure, trophic level of the community) were most robust (i.e., showed the clearest trend) and that multiple indicators are necessary to identify fishing perturbations. These indicators could be used as performance indicators when compared to a baseline for management purposes. This study shows that ecosystem models can be valuable tools in identification of the system state in terms of complexity, stability, and resilience and, therefore, can complement biological metrics currently used by monitoring programs as indicators for coral reef status. Moreover, ecosystem models can improve our understanding of a system’s internal structure that can be used to support management in identification of approaches to reverse unfavorable states. PMID:23737951

  10. An Integrated Coral Reef Ecosystem Model to Support Resource Management under a Changing Climate

    PubMed Central

    Weijerman, Mariska; Fulton, Elizabeth A.; Kaplan, Isaac C.; Gorton, Rebecca; Leemans, Rik; Mooij, Wolf M.; Brainard, Russell E.

    2015-01-01

    Millions of people rely on the ecosystem services provided by coral reefs, but sustaining these benefits requires an understanding of how reefs and their biotic communities are affected by local human-induced disturbances and global climate change. Ecosystem-based management that explicitly considers the indirect and cumulative effects of multiple disturbances has been recommended and adopted in policies in many places around the globe. Ecosystem models give insight into complex reef dynamics and their responses to multiple disturbances and are useful tools to support planning and implementation of ecosystem-based management. We adapted the Atlantis Ecosystem Model to incorporate key dynamics for a coral reef ecosystem around Guam in the tropical western Pacific. We used this model to quantify the effects of predicted climate and ocean changes and current levels of current land-based sources of pollution (LBSP) and fishing. We used the following six ecosystem metrics as indicators of ecosystem state, resilience and harvest potential: 1) ratio of calcifying to non-calcifying benthic groups, 2) trophic level of the community, 3) biomass of apex predators, 4) biomass of herbivorous fishes, 5) total biomass of living groups and 6) the end-to-start ratio of exploited fish groups. Simulation tests of the effects of each of the three drivers separately suggest that by mid-century climate change will have the largest overall effect on this suite of ecosystem metrics due to substantial negative effects on coral cover. The effects of fishing were also important, negatively influencing five out of the six metrics. Moreover, LBSP exacerbates this effect for all metrics but not quite as badly as would be expected under additive assumptions, although the magnitude of the effects of LBSP are sensitive to uncertainty associated with primary productivity. Over longer time spans (i.e., 65 year simulations), climate change impacts have a slight positive interaction with other drivers

  11. An Integrated Coral Reef Ecosystem Model to Support Resource Management under a Changing Climate.

    PubMed

    Weijerman, Mariska; Fulton, Elizabeth A; Kaplan, Isaac C; Gorton, Rebecca; Leemans, Rik; Mooij, Wolf M; Brainard, Russell E

    2015-01-01

    Millions of people rely on the ecosystem services provided by coral reefs, but sustaining these benefits requires an understanding of how reefs and their biotic communities are affected by local human-induced disturbances and global climate change. Ecosystem-based management that explicitly considers the indirect and cumulative effects of multiple disturbances has been recommended and adopted in policies in many places around the globe. Ecosystem models give insight into complex reef dynamics and their responses to multiple disturbances and are useful tools to support planning and implementation of ecosystem-based management. We adapted the Atlantis Ecosystem Model to incorporate key dynamics for a coral reef ecosystem around Guam in the tropical western Pacific. We used this model to quantify the effects of predicted climate and ocean changes and current levels of current land-based sources of pollution (LBSP) and fishing. We used the following six ecosystem metrics as indicators of ecosystem state, resilience and harvest potential: 1) ratio of calcifying to non-calcifying benthic groups, 2) trophic level of the community, 3) biomass of apex predators, 4) biomass of herbivorous fishes, 5) total biomass of living groups and 6) the end-to-start ratio of exploited fish groups. Simulation tests of the effects of each of the three drivers separately suggest that by mid-century climate change will have the largest overall effect on this suite of ecosystem metrics due to substantial negative effects on coral cover. The effects of fishing were also important, negatively influencing five out of the six metrics. Moreover, LBSP exacerbates this effect for all metrics but not quite as badly as would be expected under additive assumptions, although the magnitude of the effects of LBSP are sensitive to uncertainty associated with primary productivity. Over longer time spans (i.e., 65 year simulations), climate change impacts have a slight positive interaction with other drivers

  12. Key Ecological Interactions of Reef Building Corals - 11-16-2011

    EPA Science Inventory

    Coral reefs are very important marine ecosystems because they support tremendous biodiversity and reefs are critical economic resources many coastal nations. Tropical reef structures are largely built by stony corals. This presentation provides background on basic coral biology t...

  13. Conservation genetics and the resilience of reef-building corals.

    PubMed

    van Oppen, Madeleine J H; Gates, Ruth D

    2006-11-01

    Coral reefs have suffered long-term decline due to a range of anthropogenic disturbances and are now also under threat from climate change. For appropriate management of these vulnerable and valuable ecosystems it is important to understand the factors and processes that determine their resilience and that of the organisms inhabiting them, as well as those that have led to existing patterns of coral reef biodiversity. The scleractinian (stony) corals deposit the structural framework that supports and promotes the maintenance of biological diversity and complexity of coral reefs, and as such, are major components of these ecosystems. The success of reef-building corals is related to their obligate symbiotic association with dinoflagellates of the genus Symbiodinium. These one-celled algal symbionts (zooxanthellae) live in the endodermal tissues of their coral host, provide most of the host's energy budget and promote rapid calcification. Furthermore, zooxanthellae are the main primary producers on coral reefs due to the oligotrophic nature of the surrounding waters. In this review paper, we summarize and critically evaluate studies that have employed genetics and/or molecular biology in examining questions relating to the evolution and ecology of reef-building corals and their algal endosymbionts, and that bear relevance to coral reef conservation. We discuss how these studies can focus future efforts, and examine how these approaches enhance our understanding of the resilience of reef-building corals.

  14. Historical Reconstruction Reveals Recovery in Hawaiian Coral Reefs

    PubMed Central

    Kittinger, John N.; Pandolfi, John M.; Blodgett, Jonathan H.; Hunt, Terry L.; Jiang, Hong; Maly, Kepā; McClenachan, Loren E.; Schultz, Jennifer K.; Wilcox, Bruce A.

    2011-01-01

    Coral reef ecosystems are declining worldwide, yet regional differences in the trajectories, timing and extent of degradation highlight the need for in-depth regional case studies to understand the factors that contribute to either ecosystem sustainability or decline. We reconstructed social-ecological interactions in Hawaiian coral reef environments over 700 years using detailed datasets on ecological conditions, proximate anthropogenic stressor regimes and social change. Here we report previously undetected recovery periods in Hawaiian coral reefs, including a historical recovery in the MHI (∼AD 1400–1820) and an ongoing recovery in the NWHI (∼AD 1950–2009+). These recovery periods appear to be attributed to a complex set of changes in underlying social systems, which served to release reefs from direct anthropogenic stressor regimes. Recovery at the ecosystem level is associated with reductions in stressors over long time periods (decades+) and large spatial scales (>103 km2). Our results challenge conventional assumptions and reported findings that human impacts to ecosystems are cumulative and lead only to long-term trajectories of environmental decline. In contrast, recovery periods reveal that human societies have interacted sustainably with coral reef environments over long time periods, and that degraded ecosystems may still retain the adaptive capacity and resilience to recover from human impacts. PMID:21991311

  15. Coral reef ecosystem decline: changing dynamics of coral reef carbonate production and implications for reef growth potential

    NASA Astrophysics Data System (ADS)

    Perry, Chris

    2016-04-01

    Global-scale deteriorations in coral reef health have caused major shifts in species composition and are likely to be exacerbated by climate change. It has been suggested that one effect of these ecological changes will be to lower reef carbonate production rates, which will impair reef growth potential and, ultimately, may lead to states of net reef erosion. However, quantitative data to support such assertions are limited, and linkages between the ecological state of coral reefs and their past and present geomorphic performance (in other words their growth potential) are poorly resolved. Using recently collected data from sites in the Caribbean and Indian Ocean, and which have undergone very different post-disturbance ecological trajectories over the last ~20-30 years, the differential impacts of disturbance on contemporary carbonate production regimes and on reef growth potential can be explored. In the Caribbean, a region which has been severely impacted ecological over the last 30+ years, our datasets show that average carbonate production rates on reefs are now less than 50% of pre-disturbance rates, and that calculated accretion rates (mm yr-1) are an about order of magnitude lower within shallow water habitats compared to Holocene averages. Collectively, these data suggest that recent ecological declines are now propagating through the system to impact on the geomorphic performance of Caribbean reefs and will impair their future growth potential. In contrast, the carbonate budgets of most reefs across the Chagos archipelago (central Indian Ocean), which is geographically remote and largely isolated from direct human disturbances, have recovered rapidly from major past disturbances (specifically the 1998 coral bleaching event). The carbonate budgets on these remote reefs now average +3.7 G (G = kg CaCO3 m-2 yr-1). Most significantly the production rates on Acropora-dominated reefs, which were most severely impacted by the 1998 bleaching event, average +8.4 G

  16. Climate-driven coral reorganisation influences aggressive behaviour in juvenile coral-reef fishes

    NASA Astrophysics Data System (ADS)

    Kok, Judith E.; Graham, Nicholas A. J.; Hoogenboom, Mia O.

    2016-06-01

    Globally, habitat degradation is altering the abundance and diversity of species in a variety of ecosystems. This study aimed to determine how habitat degradation, in terms of changing coral composition under climate change, affected abundance, species richness and aggressive behaviour of juveniles of three damselfishes ( Pomacentrus moluccensis, P. amboinensis and Dischistodus perspicillatus, in order of decreasing reliance on coral). Patch reefs were constructed to simulate two types of reefs: present-day reefs that are vulnerable to climate-induced coral bleaching, and reefs with more bleaching-robust coral taxa, thereby simulating the likely future of coral reefs under a warming climate. Fish communities were allowed to establish naturally on the reefs during the summer recruitment period. Climate-robust reefs had lower total species richness of coral-reef fishes than climate-vulnerable reefs, but total fish abundance was not significantly different between reef types (pooled across all species and life-history stages). The nature of aggressive interactions, measured as the number of aggressive chases, varied according to coral composition; on climate-robust reefs, juveniles used the substratum less often to avoid aggression from competitors, and interspecific aggression became relatively more frequent than intraspecific aggression for juveniles of the coral-obligate P. moluccensis. This study highlights the importance of coral composition as a determinant of behaviour and diversity of coral-reef fishes.

  17. Warm-water coral reefs and climate change

    NASA Astrophysics Data System (ADS)

    Spalding, Mark D.; Brown, Barbara E.

    2015-11-01

    Coral reefs are highly dynamic ecosystems that are regularly exposed to natural perturbations. Human activities have increased the range, intensity, and frequency of disturbance to reefs. Threats such as overfishing and pollution are being compounded by climate change, notably warming and ocean acidification. Elevated temperatures are driving increasingly frequent bleaching events that can lead to the loss of both coral cover and reef structural complexity. There remains considerable variability in the distribution of threats and in the ability of reefs to survive or recover from such disturbances. Without significant emissions reductions, however, the future of coral reefs is increasingly bleak.

  18. 10th Anniversary Review: a changing climate for coral reefs.

    PubMed

    Lough, Janice M

    2008-01-01

    Tropical coral reefs are charismatic ecosystems that house a significant proportion of the world's marine biodiversity. Their valuable goods and services are fundamental to the livelihood of large coastal populations in the tropics. The health of many of the world's coral reefs, and the goods and services they provide, have already been severely compromised, largely due to over-exploitation by a range of human activities. These local-scale impacts, with the appropriate government instruments, support and management actions, can potentially be controlled and even ameliorated. Unfortunately, other human actions (largely in countries outside of the tropics), by changing global climate, have added additional global-scale threats to the continued survival of present-day coral reefs. Moderate warming of the tropical oceans has already resulted in an increase in mass coral bleaching events, affecting nearly all of the world's coral reef regions. The frequency of these events will only increase as global temperatures continue to rise. Weakening of coral reef structures will be a more insidious effect of changing ocean chemistry, as the oceans absorb part of the excess atmospheric carbon dioxide. More intense tropical cyclones, changed atmospheric and ocean circulation patterns will all affect coral reef ecosystems and the many associated plants and animals. Coral reefs will not disappear but their appearance, structure and community make-up will radically change. Drastic greenhouse gas mitigation strategies are necessary to prevent the full consequences of human activities causing such alterations to coral reef ecosystems.

  19. U.S. coral reefs; imperiled national treasures

    USGS Publications Warehouse

    Field, M.E.; Cochran, S.A.; Evans, K.R.

    2002-01-01

    Coral reefs are home to 25% of all marine species. However, the tiny colonial animals that build these intricate limestone masses are dying at alarming rates. If this trend continues, in 20 years the living corals on many of the world's reefs will be dead and the ecosystems that depend on them severely damaged. As part of the effort to protect our Nation's extensive reefs, U.S. Geological Survey (USGS) scientists are working to better understand the processes that affect the health of these ecologically and economically important ecosystems.

  20. Global microbialization of coral reefs.

    PubMed

    Haas, Andreas F; Fairoz, Mohamed F M; Kelly, Linda W; Nelson, Craig E; Dinsdale, Elizabeth A; Edwards, Robert A; Giles, Steve; Hatay, Mark; Hisakawa, Nao; Knowles, Ben; Lim, Yan Wei; Maughan, Heather; Pantos, Olga; Roach, Ty N F; Sanchez, Savannah E; Silveira, Cynthia B; Sandin, Stuart; Smith, Jennifer E; Rohwer, Forest

    2016-04-25

    Microbialization refers to the observed shift in ecosystem trophic structure towards higher microbial biomass and energy use. On coral reefs, the proximal causes of microbialization are overfishing and eutrophication, both of which facilitate enhanced growth of fleshy algae, conferring a competitive advantage over calcifying corals and coralline algae. The proposed mechanism for this competitive advantage is the DDAM positive feedback loop (dissolved organic carbon (DOC), disease, algae, microorganism), where DOC released by ungrazed fleshy algae supports copiotrophic, potentially pathogenic bacterial communities, ultimately harming corals and maintaining algal competitive dominance. Using an unprecedented data set of >400 samples from 60 coral reef sites, we show that the central DDAM predictions are consistent across three ocean basins. Reef algal cover is positively correlated with lower concentrations of DOC and higher microbial abundances. On turf and fleshy macroalgal-rich reefs, higher relative abundances of copiotrophic microbial taxa were identified. These microbial communities shift their metabolic potential for carbohydrate degradation from the more energy efficient Embden-Meyerhof-Parnas pathway on coral-dominated reefs to the less efficient Entner-Doudoroff and pentose phosphate pathways on algal-dominated reefs. This 'yield-to-power' switch by microorganism directly threatens reefs via increased hypoxia and greater CO2 release from the microbial respiration of DOC.

  1. Shifts in coral-assemblage composition do not ensure persistence of reef functionality.

    PubMed

    Alvarez-Filip, Lorenzo; Carricart-Ganivet, Juan P; Horta-Puga, Guillermo; Iglesias-Prieto, Roberto

    2013-12-12

    Coral communities are changing rapidly worldwide through loss of coral cover and shifts in species composition. Although many reef-building corals are likely to decline, some weedy opportunistic species might increase in abundance. Here we explore whether the reshuffling of species can maintain ecosystem integrity and functioning. Using four common Caribbean reef-building coral genera we modeled rates of reef construction and complexity. We show that shifting coral assemblages result in rapid losses in coral-community calcification and reef rugosity that are independent of changes in the total abundance of reef corals. These losses are considerably higher than those recently attributed to climate change. Dominance patterns of coral assemblages seem to be the most important driver of the functioning of coral reefs and thus, the future of these ecosystems might depend not only on reductions of local and global stressors, but also on the maintenance of keystone coral species.

  2. Warm-water coral reefs and climate change.

    PubMed

    Spalding, Mark D; Brown, Barbara E

    2015-11-13

    Coral reefs are highly dynamic ecosystems that are regularly exposed to natural perturbations. Human activities have increased the range, intensity, and frequency of disturbance to reefs. Threats such as overfishing and pollution are being compounded by climate change, notably warming and ocean acidification. Elevated temperatures are driving increasingly frequent bleaching events that can lead to the loss of both coral cover and reef structural complexity. There remains considerable variability in the distribution of threats and in the ability of reefs to survive or recover from such disturbances. Without significant emissions reductions, however, the future of coral reefs is increasingly bleak. Copyright © 2015, American Association for the Advancement of Science.

  3. Do invasive corals alter coral reef processes? An empirical approach evaluating reef fish trophic interactions.

    PubMed

    Miranda, Ricardo J; Nunes, José de Anchieta C C; Mariano-Neto, Eduardo; Sippo, James Z; Barros, Francisco

    2018-07-01

    Understanding how invasive species affect key ecological interactions and ecosystem processes is imperative for the management of invasions. We evaluated the effects of invasive corals (Tubastraea spp.) on fish trophic interactions in an Atlantic coral reef. Remote underwater video cameras were used to examine fish foraging activity (bite rates and food preferences) on invasive cover levels. Using a model selection approach, we found that fish feeding rates declined with increased invasive cover. For Roving Herbivores (RH) and Sessile Invertivores (SI), an abrupt reduction of fish feeding rates corresponded with higher invasive cover, while feeding rates of Territorial Herbivores (TH) and Mobile Invertivores (MI) decreased linearly with cover increase. Additionally, some fish trophic groups, such as RH, SI and Omnivores (OM), had lower densities in reef sections with high invasive cover. These findings demonstrate that invasive corals negatively impact fish-benthic interactions, and could potentially alter existing trophic relationships in reef ecosystems. Copyright © 2018 Elsevier Ltd. All rights reserved.

  4. Novel tradable instruments in the conservation of coral reefs, based on the coral gardening concept for reef restoration.

    PubMed

    Rinkevich, Baruch

    2015-10-01

    Nearly all coral reefs bordering nations have experienced net losses in reef biodiversity, goods and services, even without considering the ever-developing global change impacts. In response, this overview wishes to reveal through prospects of active reef-restoration, the currently non-marketed or poorly marketed reef services, focusing on a single coral species (Stylophora pistillata). It is implied that the integration of equity capitals and other commodification with reef-restoration practices will improve total reef services. Two tiers of market-related activities are defined, the traditional first-tier instruments (valuating costs/gains for extracting tradable goods and services) and novel second-tier instruments (new/expanded monetary tools developed as by-products of reef restoration measures). The emerging new suite of economic mechanisms based on restoration methodologies could be served as an incentive for ecosystem conservation, enhancing the sum values of all services generated by coral reefs, where the same stocks of farmed/transplanted coral colonies will be used as market instruments. I found that active restoration measures disclose 12 classes of second-tier goods and services, which may partly/wholly finance restoration acts, bringing to light reef capitalizations that allow the expansion of markets with products that have not been considered before. The degree to which the second tier of market-related services could buffer coral-reef degradation is still unclear and would vary with different reef types and in various reef restoration scenarios; however, reducing the uncertainty associated with restoration. It is expected that the expansion of markets with the new products and the enhancement of those already existing will be materialized even if reef ecosystems will recover into different statuses. Copyright © 2015 Elsevier Ltd. All rights reserved.

  5. Community Structure Of Coral Reefs In Saebus Island, Sumenep District, East Java

    NASA Astrophysics Data System (ADS)

    Rizmaadi, Mada; Riter, Johannes; Fatimah, Siti; Rifaldi, Riyan; Yoga, Arditho; Ramadhan, Fikri; Ambariyanto, Ambariyanto

    2018-02-01

    Increasing degradation coral reefs ecosystem has created many concerns. Reduction of this damage can only be done with good and proper management of coral reef ecosystem based on existing condition. The condition of coral reef ecosystem can be determined by assessing its community structure. This study investigates community structure of coral reef ecosystems around Saebus Island, Sumenep District, East Java, by using satellite imagery analysis and field observations. Satellite imagery analysis by Lyzenga methods was used to determine the observation stations and substrate distribution. Field observations were done by using Line Intercept Transect method at 4 stations, at the depth of 3 and 10 meters. The results showed that the percentage of coral reef coverage at the depth of 3 and 10 meters were 64.36% and 59.29%, respectively, and included in fine coverage category. This study found in total 25 genera from 13 families of corals at all stations. The most common species found were Acropora, Porites, and Pocillopora, while the least common species were Favites and Montastrea. Average value of Diversity, Uniformity and Dominancy indices were 2.94, 0.8 and 0.18 which include as medium, high, and low category, respectively. These results suggest that coral reef ecosystems around Saebus Island is in a good condition.

  6. Extinction vulnerability of coral reef fishes.

    PubMed

    Graham, Nicholas A J; Chabanet, Pascale; Evans, Richard D; Jennings, Simon; Letourneur, Yves; Aaron Macneil, M; McClanahan, Tim R; Ohman, Marcus C; Polunin, Nicholas V C; Wilson, Shaun K

    2011-04-01

    With rapidly increasing rates of contemporary extinction, predicting extinction vulnerability and identifying how multiple stressors drive non-random species loss have become key challenges in ecology. These assessments are crucial for avoiding the loss of key functional groups that sustain ecosystem processes and services. We developed a novel predictive framework of species extinction vulnerability and applied it to coral reef fishes. Although relatively few coral reef fishes are at risk of global extinction from climate disturbances, a negative convex relationship between fish species locally vulnerable to climate change vs. fisheries exploitation indicates that the entire community is vulnerable on the many reefs where both stressors co-occur. Fishes involved in maintaining key ecosystem functions are more at risk from fishing than climate disturbances. This finding is encouraging as local and regional commitment to fisheries management action can maintain reef ecosystem functions pending progress towards the more complex global problem of stabilizing the climate. © 2011 Blackwell Publishing Ltd/CNRS.

  7. Extinction vulnerability of coral reef fishes

    PubMed Central

    Graham, Nicholas A J; Chabanet, Pascale; Evans, Richard D; Jennings, Simon; Letourneur, Yves; Aaron MacNeil, M; McClanahan, Tim R; Öhman, Marcus C; Polunin, Nicholas V C; Wilson, Shaun K

    2011-01-01

    With rapidly increasing rates of contemporary extinction, predicting extinction vulnerability and identifying how multiple stressors drive non-random species loss have become key challenges in ecology. These assessments are crucial for avoiding the loss of key functional groups that sustain ecosystem processes and services. We developed a novel predictive framework of species extinction vulnerability and applied it to coral reef fishes. Although relatively few coral reef fishes are at risk of global extinction from climate disturbances, a negative convex relationship between fish species locally vulnerable to climate change vs. fisheries exploitation indicates that the entire community is vulnerable on the many reefs where both stressors co-occur. Fishes involved in maintaining key ecosystem functions are more at risk from fishing than climate disturbances. This finding is encouraging as local and regional commitment to fisheries management action can maintain reef ecosystem functions pending progress towards the more complex global problem of stabilizing the climate. PMID:21320260

  8. Using virtual reality to estimate aesthetic values of coral reefs

    PubMed Central

    Clifford, Sam; Caley, M. Julian; Pearse, Alan R.; Brown, Ross; James, Allan; Christensen, Bryce; Bednarz, Tomasz; Anthony, Ken; González-Rivero, Manuel; Mengersen, Kerrie; Peterson, Erin E.

    2018-01-01

    Aesthetic value, or beauty, is important to the relationship between humans and natural environments and is, therefore, a fundamental socio-economic attribute of conservation alongside other ecosystem services. However, beauty is difficult to quantify and is not estimated well using traditional approaches to monitoring coral-reef aesthetics. To improve the estimation of ecosystem aesthetic values, we developed and implemented a novel framework used to quantify features of coral-reef aesthetics based on people's perceptions of beauty. Three observer groups with different experience to reef environments (Marine Scientist, Experienced Diver and Citizen) were virtually immersed in Australian's Great Barrier Reef (GBR) using 360° images. Perceptions of beauty and observations were used to assess the importance of eight potential attributes of reef-aesthetic value. Among these, heterogeneity, defined by structural complexity and colour diversity, was positively associated with coral-reef-aesthetic values. There were no group-level differences in the way the observer groups perceived reef aesthetics suggesting that past experiences with coral reefs do not necessarily influence the perception of beauty by the observer. The framework developed here provides a generic tool to help identify indicators of aesthetic value applicable to a wide variety of natural systems. The ability to estimate aesthetic values robustly adds an important dimension to the holistic conservation of the GBR, coral reefs worldwide and other natural ecosystems. PMID:29765676

  9. Using virtual reality to estimate aesthetic values of coral reefs.

    PubMed

    Vercelloni, Julie; Clifford, Sam; Caley, M Julian; Pearse, Alan R; Brown, Ross; James, Allan; Christensen, Bryce; Bednarz, Tomasz; Anthony, Ken; González-Rivero, Manuel; Mengersen, Kerrie; Peterson, Erin E

    2018-04-01

    Aesthetic value, or beauty, is important to the relationship between humans and natural environments and is, therefore, a fundamental socio-economic attribute of conservation alongside other ecosystem services. However, beauty is difficult to quantify and is not estimated well using traditional approaches to monitoring coral-reef aesthetics. To improve the estimation of ecosystem aesthetic values, we developed and implemented a novel framework used to quantify features of coral-reef aesthetics based on people's perceptions of beauty. Three observer groups with different experience to reef environments (Marine Scientist, Experienced Diver and Citizen) were virtually immersed in Australian's Great Barrier Reef (GBR) using 360° images. Perceptions of beauty and observations were used to assess the importance of eight potential attributes of reef-aesthetic value. Among these, heterogeneity, defined by structural complexity and colour diversity, was positively associated with coral-reef-aesthetic values. There were no group-level differences in the way the observer groups perceived reef aesthetics suggesting that past experiences with coral reefs do not necessarily influence the perception of beauty by the observer. The framework developed here provides a generic tool to help identify indicators of aesthetic value applicable to a wide variety of natural systems. The ability to estimate aesthetic values robustly adds an important dimension to the holistic conservation of the GBR, coral reefs worldwide and other natural ecosystems.

  10. Quantifying Coral Reef Ecosystem Services

    EPA Science Inventory

    Coral reefs have been declining during the last four decades as a result of both local and global anthropogenic stresses. Numerous research efforts to elucidate the nature, causes, magnitude, and potential remedies for the decline have led to the widely held belief that the recov...

  11. Primary production of coral ecosystems in the Vietnamese coastal and adjacent marine waters

    NASA Astrophysics Data System (ADS)

    Tac-An, Nguyen; Minh-Thu, Phan; Cherbadji, I. I.; Propp, M. V.; Odintsov, V. S.; Propp, L. H.

    2013-11-01

    Coral reef ecosystems in coastal waters and islands of Vietnam have high primary production. Average gross primary production (GPP) in coral reef waters was 0.39 g C m-2 day-1. GPP of corals ranged from 3.12 to 4.37 g C m-2 day-1. GPP of benthic microalgae in coral reefs ranged from 2 to 10 g C m-2 day-1. GPP of macro-algae was 2.34 g C m-2 day-1. Therefore, the total of GPP of whole coral reef ecosystems could reach 7.85 to 17.10 g C m-2 day-1. Almost all values of the ratio of photosynthesis to respiration in the water bodies are higher than 1, which means these regions are autotrophic systems. Wire variation of GPP in coral reefs was contributed by species abundance of coral and organisms, nutrient supports and environmental characteristics of coral ecosystems. Coral reefs play an important ecological role of biogeochemical cycling of nutrients in waters around the reefs. These results contribute valuable information for the protection, conservation and sustainable exploitation of the natural resources in coral reef ecosystems in Vietnam.

  12. CORAL REEF BIOLOGICAL CRITERIA: USING THE CLEAN ...

    EPA Pesticide Factsheets

    Coral reefs are declining at unprecedented rates worldwide due to multiple interactive stressors including climate change and land-based sources of pollution. The Clean Water Act (CWA) can be a powerful legal instrument for protecting water resources, including the biological inhabitants of coral reefs. The objective of the CWA is to restore and maintain the chemical, physical and biological integrity of water resources. Coral reef protection and restoration under the Clean Water Act begins with water quality standards - provisions of state or Federal law that consist of a designated use(s) for the waters of the United States and water quality criteria sufficient to protect the uses. Aquatic life use is the designated use that is measured by biological criteria (biocriteria). Biocriteria are expectations set by a jurisdiction for the quality and quantity of living aquatic resources in a defined waterbody. Biocriteria are an important addition to existing management tools for coral reef ecosystems. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework to aid States and Territories in their development, adoption, and implementation of coral reef biocriteria in their respective water quality standards. The Technical Support Document “Coral Reef Biological Criteria: Using the Clean Water Act to Protect a National Treasure” will provide a framework for coral re

  13. Future habitat suitability for coral reef ecosystems under global warming and ocean acidification

    PubMed Central

    Couce, Elena; Ridgwell, Andy; Hendy, Erica J

    2013-01-01

    Rising atmospheric CO2 concentrations are placing spatially divergent stresses on the world's tropical coral reefs through increasing ocean surface temperatures and ocean acidification. We show how these two stressors combine to alter the global habitat suitability for shallow coral reef ecosystems, using statistical Bioclimatic Envelope Models rather than basing projections on any a priori assumptions of physiological tolerances or fixed thresholds. We apply two different modeling approaches (Maximum Entropy and Boosted Regression Trees) with two levels of complexity (one a simplified and reduced environmental variable version of the other). Our models project a marked temperature-driven decline in habitat suitability for many of the most significant and bio-diverse tropical coral regions, particularly in the central Indo-Pacific. This is accompanied by a temperature-driven poleward range expansion of favorable conditions accelerating up to 40–70 km per decade by 2070. We find that ocean acidification is less influential for determining future habitat suitability than warming, and its deleterious effects are centered evenly in both hemispheres between 5° and 20° latitude. Contrary to expectations, the combined impact of ocean surface temperature rise and acidification leads to little, if any, degradation in future habitat suitability across much of the Atlantic and areas currently considered ‘marginal’ for tropical corals, such as the eastern Equatorial Pacific. These results are consistent with fossil evidence of range expansions during past warm periods. In addition, the simplified models are particularly sensitive to short-term temperature variations and their projections correlate well with reported locations of bleaching events. Our approach offers new insights into the relative impact of two global environmental pressures associated with rising atmospheric CO2 on potential future habitats, but greater understanding of past and current controls on

  14. Future habitat suitability for coral reef ecosystems under global warming and ocean acidification.

    PubMed

    Couce, Elena; Ridgwell, Andy; Hendy, Erica J

    2013-12-01

    Rising atmospheric CO2 concentrations are placing spatially divergent stresses on the world's tropical coral reefs through increasing ocean surface temperatures and ocean acidification. We show how these two stressors combine to alter the global habitat suitability for shallow coral reef ecosystems, using statistical Bioclimatic Envelope Models rather than basing projections on any a priori assumptions of physiological tolerances or fixed thresholds. We apply two different modeling approaches (Maximum Entropy and Boosted Regression Trees) with two levels of complexity (one a simplified and reduced environmental variable version of the other). Our models project a marked temperature-driven decline in habitat suitability for many of the most significant and bio-diverse tropical coral regions, particularly in the central Indo-Pacific. This is accompanied by a temperature-driven poleward range expansion of favorable conditions accelerating up to 40-70 km per decade by 2070. We find that ocean acidification is less influential for determining future habitat suitability than warming, and its deleterious effects are centered evenly in both hemispheres between 5° and 20° latitude. Contrary to expectations, the combined impact of ocean surface temperature rise and acidification leads to little, if any, degradation in future habitat suitability across much of the Atlantic and areas currently considered 'marginal' for tropical corals, such as the eastern Equatorial Pacific. These results are consistent with fossil evidence of range expansions during past warm periods. In addition, the simplified models are particularly sensitive to short-term temperature variations and their projections correlate well with reported locations of bleaching events. Our approach offers new insights into the relative impact of two global environmental pressures associated with rising atmospheric CO2 on potential future habitats, but greater understanding of past and current controls on coral

  15. Determining the Extent and Characterizing Coral Reef Habitats of the Northern Latitudes of the Florida Reef Tract (Martin County)

    PubMed Central

    Walker, Brian K.; Gilliam, David S.

    2013-01-01

    Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25–27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km2 seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future community shift and

  16. Determining the extent and characterizing coral reef habitats of the northern latitudes of the Florida Reef Tract (Martin County).

    PubMed

    Walker, Brian K; Gilliam, David S

    2013-01-01

    Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25-27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km(2) seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future community shift and

  17. Coral reefs: threats and conservation in an era of global change.

    PubMed

    Riegl, Bernhard; Bruckner, Andy; Coles, Steve L; Renaud, Philip; Dodge, Richard E

    2009-04-01

    Coral reefs are iconic, threatened ecosystems that have been in existence for approximately 500 million years, yet their continued ecological persistence seems doubtful at present. Anthropogenic modification of chemical and physical atmospheric dynamics that cause coral death by bleaching and newly emergent diseases due to increased heat and irradiation, as well as decline in calcification caused by ocean acidification due to increased CO(2), are the most important large-scale threats. On more local scales, overfishing and destructive fisheries, coastal construction, nutrient enrichment, increased runoff and sedimentation, and the introduction of nonindigenous invasive species have caused phase shifts away from corals. Already approximately 20% of the world's reefs are lost and approximately 26% are under imminent threat. Conservation science of coral reefs is well advanced, but its practical application has often been lagging. Societal priorites, economic pressures, and legal/administrative systems of many countries are more prone to destroy rather than conserve coral-reef ecosystems. Nevertheless, many examples of successful conservation exist from the national level to community-enforced local action. When effectively managed, protected areas have contributed to regeneration of coral reefs and stocks of associated marine resources. Local communities often support coral-reef conservation in order to raise income potential associated with tourism and/or improved resource levels. Coral reefs create an annual income in S-Florida alone of over $4 billion. Thus, no conflict between development, societal welfare, and coral-reef conservation needs to exist. Despite growing threats, it is not too late for decisive action to protect and save these economically and ecologically high-value ecosystems. Conservation science plays a critical role in designing effective strategies.

  18. Carbon dioxide addition to coral reef waters suppresses net community calcification.

    PubMed

    Albright, Rebecca; Takeshita, Yuichiro; Koweek, David A; Ninokawa, Aaron; Wolfe, Kennedy; Rivlin, Tanya; Nebuchina, Yana; Young, Jordan; Caldeira, Ken

    2018-03-22

    Coral reefs feed millions of people worldwide, provide coastal protection and generate billions of dollars annually in tourism revenue. The underlying architecture of a reef is a biogenic carbonate structure that accretes over many years of active biomineralization by calcifying organisms, including corals and algae. Ocean acidification poses a chronic threat to coral reefs by reducing the saturation state of the aragonite mineral of which coral skeletons are primarily composed, and lowering the concentration of carbonate ions required to maintain the carbonate reef. Reduced calcification, coupled with increased bioerosion and dissolution, may drive reefs into a state of net loss this century. Our ability to predict changes in ecosystem function and associated services ultimately hinges on our understanding of community- and ecosystem-scale responses. Past research has primarily focused on the responses of individual species rather than evaluating more complex, community-level responses. Here we use an in situ carbon dioxide enrichment experiment to quantify the net calcification response of a coral reef flat to acidification. We present an estimate of community-scale calcification sensitivity to ocean acidification that is, to our knowledge, the first to be based on a controlled experiment in the natural environment. This estimate provides evidence that near-future reductions in the aragonite saturation state will compromise the ecosystem function of coral reefs.

  19. Carbon dioxide addition to coral reef waters suppresses net community calcification

    NASA Astrophysics Data System (ADS)

    Albright, Rebecca; Takeshita, Yuichiro; Koweek, David A.; Ninokawa, Aaron; Wolfe, Kennedy; Rivlin, Tanya; Nebuchina, Yana; Young, Jordan; Caldeira, Ken

    2018-03-01

    Coral reefs feed millions of people worldwide, provide coastal protection and generate billions of dollars annually in tourism revenue. The underlying architecture of a reef is a biogenic carbonate structure that accretes over many years of active biomineralization by calcifying organisms, including corals and algae. Ocean acidification poses a chronic threat to coral reefs by reducing the saturation state of the aragonite mineral of which coral skeletons are primarily composed, and lowering the concentration of carbonate ions required to maintain the carbonate reef. Reduced calcification, coupled with increased bioerosion and dissolution, may drive reefs into a state of net loss this century. Our ability to predict changes in ecosystem function and associated services ultimately hinges on our understanding of community- and ecosystem-scale responses. Past research has primarily focused on the responses of individual species rather than evaluating more complex, community-level responses. Here we use an in situ carbon dioxide enrichment experiment to quantify the net calcification response of a coral reef flat to acidification. We present an estimate of community-scale calcification sensitivity to ocean acidification that is, to our knowledge, the first to be based on a controlled experiment in the natural environment. This estimate provides evidence that near-future reductions in the aragonite saturation state will compromise the ecosystem function of coral reefs.

  20. Are coral reefs victims of their own past success?

    PubMed

    Renema, Willem; Pandolfi, John M; Kiessling, Wolfgang; Bosellini, Francesca R; Klaus, James S; Korpanty, Chelsea; Rosen, Brian R; Santodomingo, Nadiezhda; Wallace, Carden C; Webster, Jody M; Johnson, Kenneth G

    2016-04-01

    As one of the most prolific and widespread reef builders, the staghorn coral Acropora holds a disproportionately large role in how coral reefs will respond to accelerating anthropogenic change. We show that although Acropora has a diverse history extended over the past 50 million years, it was not a dominant reef builder until the onset of high-amplitude glacioeustatic sea-level fluctuations 1.8 million years ago. High growth rates and propagation by fragmentation have favored staghorn corals since this time. In contrast, staghorn corals are among the most vulnerable corals to anthropogenic stressors, with marked global loss of abundance worldwide. The continued decline in staghorn coral abundance and the mounting challenges from both local stress and climate change will limit the coral reefs' ability to provide ecosystem services.

  1. Environmental controls on modern scleractinian coral and reef-scale calcification.

    PubMed

    Courtney, Travis A; Lebrato, Mario; Bates, Nicholas R; Collins, Andrew; de Putron, Samantha J; Garley, Rebecca; Johnson, Rod; Molinero, Juan-Carlos; Noyes, Timothy J; Sabine, Christopher L; Andersson, Andreas J

    2017-11-01

    Modern reef-building corals sustain a wide range of ecosystem services because of their ability to build calcium carbonate reef systems. The influence of environmental variables on coral calcification rates has been extensively studied, but our understanding of their relative importance is limited by the absence of in situ observations and the ability to decouple the interactions between different properties. We show that temperature is the primary driver of coral colony ( Porites astreoides and Diploria labyrinthiformis ) and reef-scale calcification rates over a 2-year monitoring period from the Bermuda coral reef. On the basis of multimodel climate simulations (Coupled Model Intercomparison Project Phase 5) and assuming sufficient coral nutrition, our results suggest that P. astreoides and D. labyrinthiformis coral calcification rates in Bermuda could increase throughout the 21st century as a result of gradual warming predicted under a minimum CO 2 emissions pathway [representative concentration pathway (RCP) 2.6] with positive 21st-century calcification rates potentially maintained under a reduced CO 2 emissions pathway (RCP 4.5). These results highlight the potential benefits of rapid reductions in global anthropogenic CO 2 emissions for 21st-century Bermuda coral reefs and the ecosystem services they provide.

  2. CORAL CONDITION: HOW TO FATHOM THE DECLINE OF CORAL REEF ECOSYSTEMS

    EPA Science Inventory

    Coral reefs have experienced unprecedented levels of bleaching, disease and mortality during the last three decades. The goal of EPA-ORD research is to identify the culpable stressors in different species, reefs and regions using integrated field and laboratory studies.

  3. Coral reefs and the World Bank.

    PubMed

    Hatziolos, M

    1997-01-01

    The World Bank¿s involvement in coral reef conservation is part of a larger effort to promote the sound management of coastal and marine resources. This involves three major thrusts: partnerships, investments, networks and knowledge. As an initial partner and early supporter of the International Coral Reef Initiative (ICRI), the Bank serves as the executive planning committee of ICRI. In partnership with the World Conservation Union and the Great Barrier Reef Marine Park Authority, the Bank promotes the efforts towards the establishment and maintenance of a globally representative system of marine protected areas. In addition, the Bank invested over $120 million in coral reef rehabilitation and protection programs in several countries. Furthermore, the Bank developed a ¿Knowledge Bank¿ that would market ideas and knowledge to its clients along with investment projects. This aimed to put the best global knowledge on environmentally sustainable development in the hands of its staff and clients. During the celebration of 1997, as the International Year of the Reef, the Bank planned to cosponsor an associated event that would highlight the significance of coral reefs and encourage immediate action to halt their degradation to conserve this unique ecosystem.

  4. Reversal of ocean acidification enhances net coral reef calcification.

    PubMed

    Albright, Rebecca; Caldeira, Lilian; Hosfelt, Jessica; Kwiatkowski, Lester; Maclaren, Jana K; Mason, Benjamin M; Nebuchina, Yana; Ninokawa, Aaron; Pongratz, Julia; Ricke, Katharine L; Rivlin, Tanya; Schneider, Kenneth; Sesboüé, Marine; Shamberger, Kathryn; Silverman, Jacob; Wolfe, Kennedy; Zhu, Kai; Caldeira, Ken

    2016-03-17

    Approximately one-quarter of the anthropogenic carbon dioxide released into the atmosphere each year is absorbed by the global oceans, causing measurable declines in surface ocean pH, carbonate ion concentration ([CO3(2-)]), and saturation state of carbonate minerals (Ω). This process, referred to as ocean acidification, represents a major threat to marine ecosystems, in particular marine calcifiers such as oysters, crabs, and corals. Laboratory and field studies have shown that calcification rates of many organisms decrease with declining pH, [CO3(2-)], and Ω. Coral reefs are widely regarded as one of the most vulnerable marine ecosystems to ocean acidification, in part because the very architecture of the ecosystem is reliant on carbonate-secreting organisms. Acidification-induced reductions in calcification are projected to shift coral reefs from a state of net accretion to one of net dissolution this century. While retrospective studies show large-scale declines in coral, and community, calcification over recent decades, determining the contribution of ocean acidification to these changes is difficult, if not impossible, owing to the confounding effects of other environmental factors such as temperature. Here we quantify the net calcification response of a coral reef flat to alkalinity enrichment, and show that, when ocean chemistry is restored closer to pre-industrial conditions, net community calcification increases. In providing results from the first seawater chemistry manipulation experiment of a natural coral reef community, we provide evidence that net community calcification is depressed compared with values expected for pre-industrial conditions, indicating that ocean acidification may already be impairing coral reef growth.

  5. Reversal of ocean acidification enhances net coral reef calcification

    NASA Astrophysics Data System (ADS)

    Albright, Rebecca; Caldeira, Lilian; Hosfelt, Jessica; Kwiatkowski, Lester; MacLaren, Jana K.; Mason, Benjamin M.; Nebuchina, Yana; Ninokawa, Aaron; Pongratz, Julia; Ricke, Katharine L.; Rivlin, Tanya; Schneider, Kenneth; Sesboüé, Marine; Shamberger, Kathryn; Silverman, Jacob; Wolfe, Kennedy; Zhu, Kai; Caldeira, Ken

    2016-03-01

    Approximately one-quarter of the anthropogenic carbon dioxide released into the atmosphere each year is absorbed by the global oceans, causing measurable declines in surface ocean pH, carbonate ion concentration ([CO32-]), and saturation state of carbonate minerals (Ω). This process, referred to as ocean acidification, represents a major threat to marine ecosystems, in particular marine calcifiers such as oysters, crabs, and corals. Laboratory and field studies have shown that calcification rates of many organisms decrease with declining pH, [CO32-], and Ω. Coral reefs are widely regarded as one of the most vulnerable marine ecosystems to ocean acidification, in part because the very architecture of the ecosystem is reliant on carbonate-secreting organisms. Acidification-induced reductions in calcification are projected to shift coral reefs from a state of net accretion to one of net dissolution this century. While retrospective studies show large-scale declines in coral, and community, calcification over recent decades, determining the contribution of ocean acidification to these changes is difficult, if not impossible, owing to the confounding effects of other environmental factors such as temperature. Here we quantify the net calcification response of a coral reef flat to alkalinity enrichment, and show that, when ocean chemistry is restored closer to pre-industrial conditions, net community calcification increases. In providing results from the first seawater chemistry manipulation experiment of a natural coral reef community, we provide evidence that net community calcification is depressed compared with values expected for pre-industrial conditions, indicating that ocean acidification may already be impairing coral reef growth.

  6. Assessing the sensitivity of coral reef condition indicators to local and global stressors with Bayesian networks

    EPA Science Inventory

    Coral reefs are highly valued ecosystems that are currently imperiled. Although the value of coral reefs to human societies is only just being investigated and better understood, for many local and global economies coral reefs are important providers of ecosystem services that su...

  7. Coral reef diseases in the Atlantic-Caribbean

    USGS Publications Warehouse

    Rogers, Caroline S.; Weil, Ernesto; Dubinsky, Zvy; Stambler, Noga

    2010-01-01

    Coral reefs are the jewels of the tropical oceans. They boast the highest diversity of all marine ecosystems, aid in the development and protection of other important, productive coastal marine communities, and have provided millions of people with food, building materials, protection from storms, recreation and social stability over thousands of years, and more recently, income, active pharmacological compounds and other benefits. These communities have been deteriorating rapidly in recent times. The continuous emergence of coral reef diseases and increase in bleaching events caused in part by high water temperatures among other factors underscore the need for intensive assessments of their ecological status and causes and their impact on coral reefs.

  8. Prioritizing land and sea conservation investments to protect coral reefs.

    PubMed

    Klein, Carissa J; Ban, Natalie C; Halpern, Benjamin S; Beger, Maria; Game, Edward T; Grantham, Hedley S; Green, Alison; Klein, Travis J; Kininmonth, Stuart; Treml, Eric; Wilson, Kerrie; Possingham, Hugh P

    2010-08-30

    Coral reefs have exceptional biodiversity, support the livelihoods of millions of people, and are threatened by multiple human activities on land (e.g. farming) and in the sea (e.g. overfishing). Most conservation efforts occur at local scales and, when effective, can increase the resilience of coral reefs to global threats such as climate change (e.g. warming water and ocean acidification). Limited resources for conservation require that we efficiently prioritize where and how to best sustain coral reef ecosystems. Here we develop the first prioritization approach that can guide regional-scale conservation investments in land- and sea-based conservation actions that cost-effectively mitigate threats to coral reefs, and apply it to the Coral Triangle, an area of significant global attention and funding. Using information on threats to marine ecosystems, effectiveness of management actions at abating threats, and the management and opportunity costs of actions, we calculate the rate of return on investment in two conservation actions in sixteen ecoregions. We discover that marine conservation almost always trumps terrestrial conservation within any ecoregion, but terrestrial conservation in one ecoregion can be a better investment than marine conservation in another. We show how these results could be used to allocate a limited budget for conservation and compare them to priorities based on individual criteria. Previous prioritization approaches do not consider both land and sea-based threats or the socioeconomic costs of conserving coral reefs. A simple and transparent approach like ours is essential to support effective coral reef conservation decisions in a large and diverse region like the Coral Triangle, but can be applied at any scale and to other marine ecosystems.

  9. Plastic waste associated with disease on coral reefs.

    PubMed

    Lamb, Joleah B; Willis, Bette L; Fiorenza, Evan A; Couch, Courtney S; Howard, Robert; Rader, Douglas N; True, James D; Kelly, Lisa A; Ahmad, Awaludinnoer; Jompa, Jamaluddin; Harvell, C Drew

    2018-01-26

    Plastic waste can promote microbial colonization by pathogens implicated in outbreaks of disease in the ocean. We assessed the influence of plastic waste on disease risk in 124,000 reef-building corals from 159 reefs in the Asia-Pacific region. The likelihood of disease increases from 4% to 89% when corals are in contact with plastic. Structurally complex corals are eight times more likely to be affected by plastic, suggesting that microhabitats for reef-associated organisms and valuable fisheries will be disproportionately affected. Plastic levels on coral reefs correspond to estimates of terrestrial mismanaged plastic waste entering the ocean. We estimate that 11.1 billion plastic items are entangled on coral reefs across the Asia-Pacific and project this number to increase 40% by 2025. Plastic waste management is critical for reducing diseases that threaten ecosystem health and human livelihoods. Copyright © 2018, The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  10. Coral reef recovery dynamics in a changing world

    NASA Astrophysics Data System (ADS)

    Graham, N. A. J.; Nash, K. L.; Kool, J. T.

    2011-06-01

    Coral reef ecosystems are degrading through multiple disturbances that are becoming more frequent and severe. The complexities of this degradation have been studied in detail, but little work has assessed characteristics that allow reefs to bounce back and recover between pulse disturbance events. We quantitatively review recovery rates of coral cover from pulse disturbance events among 48 different reef locations, testing the relative roles of disturbance characteristics, reef characteristics, connectivity and anthropogenic influences. Reefs in the western Pacific Ocean had the fastest recovery, whereas reefs in the geographically isolated eastern Pacific Ocean were slowest to recover, reflecting regional differences in coral composition, fish functional diversity and geographic isolation. Disturbances that opened up large areas of benthic space recovered quickly, potentially because of nonlinear recovery where recruitment rates were high. The type of disturbance had a limited effect on subsequent rates of reef recovery, although recovery was faster following crown-of-thorns starfish outbreaks. This inconsequential role of disturbance type may be in part due to the role of unaltered structural complexity in maintaining key reef processes, such as recruitment and herbivory. Few studies explicitly recorded potential ecological determinants of recovery, such as recruitment rates, structural complexity of habitat and the functional composition of reef-associated fish. There was some evidence of slower recovery rates within protected areas compared with other management systems and fished areas, which may reflect the higher initial coral cover in protected areas rather than reflecting a management effect. A better understanding of the driving role of processes, structural complexity and diversity on recovery may enable more appropriate management actions that support coral-dominated ecosystems in our changing climate.

  11. From ridge to reef—linking erosion and changing watersheds to impacts on the coral reef ecosystems of Hawai‘i and the Pacific Ocean

    USGS Publications Warehouse

    Stock, Jonathan D.; Cochran, Susan A.; Field, Michael E.; Jacobi, James D.; Tribble, Gordon

    2011-01-01

    Coral reef ecosystems are threatened by unprecedented watershed changes in the United States and worldwide. These ecosystems sustain fishing and tourism industries essential to the economic survival of many communities. Sediment, nutrients, and pollutants from watersheds are increasingly transported to coastal waters, where these contaminants damage corals. Although pollution from watersheds is one of many factors threatening coral survival, it is one that local people can have a profound influence on. U.S. Geological Survey scientists are using mapping, monitoring, and computer modeling to better forecast the effects of watershed changes on reef health. Working with communities in Hawai‘i and on other U.S. islands in the Pacific, they are helping to provide the science needed to make informed decisions on watershed and coral reef management.

  12. Lower Mesophotic Coral Communities (60-125 m Depth) of the Northern Great Barrier Reef and Coral Sea

    PubMed Central

    Englebert, Norbert; Bongaerts, Pim; Muir, Paul R.; Hay, Kyra B.; Pichon, Michel; Hoegh-Guldberg, Ove

    2017-01-01

    Mesophotic coral ecosystems in the Indo-Pacific remain relatively unexplored, particularly at lower mesophotic depths (≥60 m), despite their potentially large spatial extent. Here, we used a remotely operated vehicle to conduct a qualitative assessment of the zooxanthellate coral community at lower mesophotic depths (60–125 m) at 10 different locations in the Great Barrier Reef Marine Park and the Coral Sea Commonwealth Marine Reserve. Lower mesophotic coral communities were present at all 10 locations, with zooxanthellate scleractinian corals extending down to ~100 metres on walls and ~125 m on steep slopes. Lower mesophotic coral communities were most diverse in the 60–80 m zone, while at depths of ≥100 m the coral community consisted almost exclusively of the genus Leptoseris. Collections of coral specimens (n = 213) between 60 and 125 m depth confirmed the presence of at least 29 different species belonging to 18 genera, including several potential new species and geographic/depth range extensions. Overall, this study highlights that lower mesophotic coral ecosystems are likely to be ubiquitous features on the outer reefs of the Great Barrier Reef and atolls of the Coral Sea, and harbour a generic and species richness of corals that is much higher than thus far reported. Further research efforts are urgently required to better understand and manage these ecosystems as part of the Great Barrier Reef Marine Park and Coral Sea Commonwealth Marine Reserve. PMID:28146574

  13. Lower Mesophotic Coral Communities (60-125 m Depth) of the Northern Great Barrier Reef and Coral Sea.

    PubMed

    Englebert, Norbert; Bongaerts, Pim; Muir, Paul R; Hay, Kyra B; Pichon, Michel; Hoegh-Guldberg, Ove

    2017-01-01

    Mesophotic coral ecosystems in the Indo-Pacific remain relatively unexplored, particularly at lower mesophotic depths (≥60 m), despite their potentially large spatial extent. Here, we used a remotely operated vehicle to conduct a qualitative assessment of the zooxanthellate coral community at lower mesophotic depths (60-125 m) at 10 different locations in the Great Barrier Reef Marine Park and the Coral Sea Commonwealth Marine Reserve. Lower mesophotic coral communities were present at all 10 locations, with zooxanthellate scleractinian corals extending down to ~100 metres on walls and ~125 m on steep slopes. Lower mesophotic coral communities were most diverse in the 60-80 m zone, while at depths of ≥100 m the coral community consisted almost exclusively of the genus Leptoseris. Collections of coral specimens (n = 213) between 60 and 125 m depth confirmed the presence of at least 29 different species belonging to 18 genera, including several potential new species and geographic/depth range extensions. Overall, this study highlights that lower mesophotic coral ecosystems are likely to be ubiquitous features on the outer reefs of the Great Barrier Reef and atolls of the Coral Sea, and harbour a generic and species richness of corals that is much higher than thus far reported. Further research efforts are urgently required to better understand and manage these ecosystems as part of the Great Barrier Reef Marine Park and Coral Sea Commonwealth Marine Reserve.

  14. EFFECTS OF GLOBAL CHANGE ON CORAL REEF ECOSYSTEMS

    EPA Science Inventory

    Corals and coral reefs of the Caribbean and through the world are deteriorating at an accelerated rate. Several stressors are believed to contrbute to this decline, including global changes in atmospheric gases and land use patterns. In particular, warmer water temperatures and...

  15. Environmental controls on modern scleractinian coral and reef-scale calcification

    PubMed Central

    Courtney, Travis A.; Lebrato, Mario; Bates, Nicholas R.; Collins, Andrew; de Putron, Samantha J.; Garley, Rebecca; Johnson, Rod; Molinero, Juan-Carlos; Noyes, Timothy J.; Sabine, Christopher L.; Andersson, Andreas J.

    2017-01-01

    Modern reef-building corals sustain a wide range of ecosystem services because of their ability to build calcium carbonate reef systems. The influence of environmental variables on coral calcification rates has been extensively studied, but our understanding of their relative importance is limited by the absence of in situ observations and the ability to decouple the interactions between different properties. We show that temperature is the primary driver of coral colony (Porites astreoides and Diploria labyrinthiformis) and reef-scale calcification rates over a 2-year monitoring period from the Bermuda coral reef. On the basis of multimodel climate simulations (Coupled Model Intercomparison Project Phase 5) and assuming sufficient coral nutrition, our results suggest that P. astreoides and D. labyrinthiformis coral calcification rates in Bermuda could increase throughout the 21st century as a result of gradual warming predicted under a minimum CO2 emissions pathway [representative concentration pathway (RCP) 2.6] with positive 21st-century calcification rates potentially maintained under a reduced CO2 emissions pathway (RCP 4.5). These results highlight the potential benefits of rapid reductions in global anthropogenic CO2 emissions for 21st-century Bermuda coral reefs and the ecosystem services they provide. PMID:29134196

  16. Say what? Coral reef sounds as indicators of community assemblages and reef conditions

    NASA Astrophysics Data System (ADS)

    Mooney, T. A.; Kaplan, M. B.

    2016-02-01

    Coral reefs host some of the highest diversity of life on the planet. Unfortunately, reef health and biodiversity is declining or is threatened as a result of climate change and human influences. Tracking these changes is necessary for effective resource management, yet estimating marine biodiversity and tracking trends in ecosystem health is a challenging and expensive task, especially in many pristine reefs which are remote and difficult to access. Many fishes, mammals and invertebrates make sound. These sounds are reflective of a number of vital biological processes and are a cue for settling reef larvae. Biological sounds may be a means to quantify ecosystem health and biodiversity, however the relationship between coral reef soundscapes and the actual taxa present remains largely unknown. This study presents a comparative evaluation of the soundscape of multiple reefs, naturally differing in benthic cover and fish diversity, in the U.S. Virgin Islands National Park. Using multiple recorders per reef we characterized spacio-temporal variation in biological sound production within and among reefs. Analyses of sounds recorded over 4 summer months indicated diel trends in both fish and snapping shrimp acoustic frequency bands with crepuscular peaks at all reefs. There were small but statistically significant acoustic differences among sites on a given reef raising the possibility of potentially localized acoustic habitats. The strength of diel trends in lower, fish-frequency bands were correlated with coral cover and fish density, yet no such relationship was found with shrimp sounds suggesting that fish sounds may be of higher relevance to tracking certain coral reef conditions. These findings indicate that, in spite of considerable variability within reef soundscapes, diel trends in low-frequency sound production reflect reef community assemblages. Further, monitoring soundscapes may be an efficient means of establishing and monitoring reef conditions.

  17. The future of coral reefs

    NASA Astrophysics Data System (ADS)

    Knowlton, Nancy

    2001-05-01

    Coral reefs, with their millions of species, have changed profoundly because of the effects of people, and will continue to do so for the foreseeable future. Reefs are subject to many of the same processes that affect other human-dominated ecosystems, but some special features merit emphasis: (i) Many dominant reef builders spawn eggs and sperm into the water column, where fertilization occurs. They are thus particularly vulnerable to Allee effects, including potential extinction associated with chronic reproductive failure. (ii) The corals likely to be most resistant to the effects of habitat degradation are small, short-lived "weedy" corals that have limited dispersal capabilities at the larval stage. Habitat degradation, together with habitat fragmentation, will therefore lead to the establishment of genetically isolated clusters of inbreeding corals. (iii) Increases in average sea temperatures by as little as 1°C, a likely result of global climate change, can cause coral "bleaching" (the breakdown of coral-algal symbiosis), changes in symbiont communities, and coral death. (iv) The activities of people near reefs increase both fishing pressure and nutrient inputs. In general, these processes favor more rapidly growing competitors, often fleshy seaweeds, and may also result in explosions of predator populations. (v) Combinations of stress appear to be associated with threshold responses and ecological surprises, including devastating pathogen outbreaks. (vi) The fossil record suggests that corals as a group are more likely to suffer extinctions than some of the groups that associate with them, whose habitat requirements may be less stringent.

  18. Ecological solutions to reef degradation: optimizing coral reef restoration in the Caribbean and Western Atlantic

    PubMed Central

    2016-01-01

    Reef restoration activities have proliferated in response to the need to mitigate coral declines and recover lost reef structure, function, and ecosystem services. Here, we describe the recent shift from costly and complex engineering solutions to recover degraded reef structure to more economical and efficient ecological approaches that focus on recovering the living components of reef communities. We review the adoption and expansion of the coral gardening framework in the Caribbean and Western Atlantic where practitioners now grow and outplant 10,000’s of corals onto degraded reefs each year. We detail the steps for establishing a gardening program as well as long-term goals and direct and indirect benefits of this approach in our region. With a strong scientific basis, coral gardening activities now contribute significantly to reef and species recovery, provide important scientific, education, and outreach opportunities, and offer alternate livelihoods to local stakeholders. While challenges still remain, the transition from engineering to ecological solutions for reef degradation has opened the field of coral reef restoration to a wider audience poised to contribute to reef conservation and recovery in regions where coral losses and recruitment bottlenecks hinder natural recovery. PMID:27781176

  19. Ecological solutions to reef degradation: optimizing coral reef restoration in the Caribbean and Western Atlantic.

    PubMed

    Lirman, Diego; Schopmeyer, Stephanie

    2016-01-01

    Reef restoration activities have proliferated in response to the need to mitigate coral declines and recover lost reef structure, function, and ecosystem services. Here, we describe the recent shift from costly and complex engineering solutions to recover degraded reef structure to more economical and efficient ecological approaches that focus on recovering the living components of reef communities. We review the adoption and expansion of the coral gardening framework in the Caribbean and Western Atlantic where practitioners now grow and outplant 10,000's of corals onto degraded reefs each year. We detail the steps for establishing a gardening program as well as long-term goals and direct and indirect benefits of this approach in our region. With a strong scientific basis, coral gardening activities now contribute significantly to reef and species recovery, provide important scientific, education, and outreach opportunities, and offer alternate livelihoods to local stakeholders. While challenges still remain, the transition from engineering to ecological solutions for reef degradation has opened the field of coral reef restoration to a wider audience poised to contribute to reef conservation and recovery in regions where coral losses and recruitment bottlenecks hinder natural recovery.

  20. Alternative stable states and phase shifts in coral reefs under anthropogenic stress.

    PubMed

    Fung, Tak; Seymour, Robert M; Johnson, Craig R

    2011-04-01

    Ecosystems with alternative stable states (ASS) may shift discontinuously from one stable state to another as environmental parameters cross a threshold. Reversal can then be difficult due to hysteresis effects. This contrasts with continuous state changes in response to changing environmental parameters, which are less difficult to reverse. Worldwide degradation of coral reefs, involving "phase shifts" from coral to algal dominance, highlights the pressing need to determine the likelihood of discontinuous phase shifts in coral reefs, in contrast to continuous shifts with no ASS. However, there is little evidence either for or against the existence of ASS for coral reefs. We use dynamic models to investigate the likelihood of continuous and discontinuous phase shifts in coral reefs subject to sustained environmental perturbation by fishing, nutrification, and sedimentation. Our modeling results suggest that coral reefs with or without anthropogenic stress can exhibit ASS, such that discontinuous phase shifts can occur. We also find evidence to support the view that high macroalgal growth rates and low grazing rates on macroalgae favor ASS in coral reefs. Further, our results suggest that the three stressors studied, either alone or in combination, can increase the likelihood of both continuous and discontinuous phase shifts by altering the competitive balance between corals and algae. However, in contrast to continuous phase shifts, we find that discontinuous shifts occur only in model coral reefs with parameter values near the extremes of their empirically determined ranges. This suggests that continuous shifts are more likely than discontinuous shifts in coral reefs. Our results also suggest that, for ecosystems in general, tackling multiple human stressors simultaneously maximizes resilience to phase shifts, ASS, and hysteresis, leading to improvements in ecosystem health and functioning.

  1. Hysteresis between coral reef calcification and the seawater aragonite saturation state

    NASA Astrophysics Data System (ADS)

    McMahon, Ashly; Santos, Isaac R.; Cyronak, Tyler; Eyre, Bradley D.

    2013-09-01

    predictions of how ocean acidification (OA) will affect coral reefs assume a linear functional relationship between the ambient seawater aragonite saturation state (Ωa) and net ecosystem calcification (NEC). We quantified NEC in a healthy coral reef lagoon in the Great Barrier Reef during different times of the day. Our observations revealed a diel hysteresis pattern in the NEC versus Ωa relationship, with peak NEC rates occurring before the Ωa peak and relatively steady nighttime NEC in spite of variable Ωa. Net ecosystem production had stronger correlations with NEC than light, temperature, nutrients, pH, and Ωa. The observed hysteresis may represent an overlooked challenge for predicting the effects of OA on coral reefs. If widespread, the hysteresis could prevent the use of a linear extrapolation to determine critical Ωa threshold levels required to shift coral reefs from a net calcifying to a net dissolving state.

  2. Vulnerability of Coral Reefs to Bioerosion From Land-Based Sources of Pollution

    NASA Astrophysics Data System (ADS)

    Prouty, Nancy G.; Cohen, Anne; Yates, Kimberly K.; Storlazzi, Curt D.; Swarzenski, Peter W.; White, Darla

    2017-12-01

    Ocean acidification (OA), the gradual decline in ocean pH and [CO32-] caused by rising levels of atmospheric CO2, poses a significant threat to coral reef ecosystems, depressing rates of calcium carbonate (CaCO3) production, and enhancing rates of bioerosion and dissolution. As ocean pH and [CO32-] decline globally, there is increasing emphasis on managing local stressors that can exacerbate the vulnerability of coral reefs to the effects of OA. We show that sustained, nutrient rich, lower pH submarine groundwater discharging onto nearshore coral reefs off west Maui lowers the pH of seawater and exposes corals to nitrate concentrations 50 times higher than ambient. Rates of coral calcification are substantially decreased, and rates of bioerosion are orders of magnitude higher than those observed in coral cores collected in the Pacific under equivalent low pH conditions but living in oligotrophic waters. Heavier coral nitrogen isotope (δ15N) values pinpoint not only site-specific eutrophication, but also a sewage nitrogen source enriched in 15N. Our results show that eutrophication of reef seawater by land-based sources of pollution can magnify the effects of OA through nutrient driven-bioerosion. These conditions could contribute to the collapse of coastal coral reef ecosystems sooner than current projections predict based only on ocean acidification.Plain Language SummaryWe show that sustained, nutrient rich, lower pH submarine groundwater discharging onto nearshore <span class="hlt">coral</span> <span class="hlt">reefs</span> off west Maui lowers the pH of seawater and exposes <span class="hlt">corals</span> to nitrate concentrations 50 times higher than ambient. Rates of <span class="hlt">coral</span> calcification are substantially decreased, and rates of bioerosion are orders of magnitude higher than those observed in <span class="hlt">coral</span> cores collected in the Pacific. With many of Maui's <span class="hlt">coral</span> <span class="hlt">reefs</span> in significant decline reducing any stressors at a local scale is important to sustaining future <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> and</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28783733','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28783733"><span>Crustose coralline algae increased framework and diversity on ancient <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Weiss, Anna; Martindale, Rowan C</p> <p>2017-01-01</p> <p>Crustose coralline algae (CCA) are key producers of carbonate sediment on <span class="hlt">reefs</span> today. Despite their importance in modern <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, the long-term relationship of CCA with <span class="hlt">reef</span> development has not been quantitatively assessed in the fossil record. This study includes data from 128 Cenozoic <span class="hlt">coral</span> <span class="hlt">reefs</span> collected from the Paleobiology Database, the Paleoreefs Database, as well as the original literature and assesses the correlation of CCA abundance with taxonomic diversity (both <span class="hlt">corals</span> and <span class="hlt">reef</span> dwellers) and framework of fossil <span class="hlt">coral</span> <span class="hlt">reefs</span>. Chi-squared tests show <span class="hlt">reef</span> type is significantly correlated with CCA abundance and post-hoc tests indicate higher involvement of CCA is associated with stronger <span class="hlt">reef</span> structure. Additionally, general linear models show <span class="hlt">coral</span> <span class="hlt">reefs</span> with higher amounts of CCA had a higher diversity of <span class="hlt">reef</span>-dwelling organisms. These data have important implications for paleoecology as they demonstrate that CCA increased building capacity, structural integrity, and diversity of ancient <span class="hlt">coral</span> <span class="hlt">reefs</span>. The analyses presented here demonstrate that the function of CCA on modern <span class="hlt">coral</span> <span class="hlt">reefs</span> is similar to their function on Cenozoic <span class="hlt">reefs</span>; thus, studies of ancient <span class="hlt">coral</span> <span class="hlt">reef</span> collapse are even more meaningful as modern analogues.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=200192&Lab=NHEERL&keyword=Symbiotic&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=200192&Lab=NHEERL&keyword=Symbiotic&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Experimental Bleaching of a <span class="hlt">Reef</span>-Building <span class="hlt">Coral</span> Using a Simplified Recirculating Laboratory Exposure System</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Determining stressor-response relationships in <span class="hlt">reef</span> building <span class="hlt">corals</span> is a critical need for researchers because of global declines in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. A simplified recirculating <span class="hlt">coral</span> exposure system for laboratory testing of a diversity of species and morphologies of <span class="hlt">reef</span> b...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2930002','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2930002"><span>Prioritizing Land and Sea Conservation Investments to Protect <span class="hlt">Coral</span> <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Klein, Carissa J.; Ban, Natalie C.; Halpern, Benjamin S.; Beger, Maria; Game, Edward T.; Grantham, Hedley S.; Green, Alison; Klein, Travis J.; Kininmonth, Stuart; Treml, Eric; Wilson, Kerrie; Possingham, Hugh P.</p> <p>2010-01-01</p> <p>Background <span class="hlt">Coral</span> <span class="hlt">reefs</span> have exceptional biodiversity, support the livelihoods of millions of people, and are threatened by multiple human activities on land (e.g. farming) and in the sea (e.g. overfishing). Most conservation efforts occur at local scales and, when effective, can increase the resilience of <span class="hlt">coral</span> <span class="hlt">reefs</span> to global threats such as climate change (e.g. warming water and ocean acidification). Limited resources for conservation require that we efficiently prioritize where and how to best sustain <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Methodology/Principal Findings Here we develop the first prioritization approach that can guide regional-scale conservation investments in land- and sea-based conservation actions that cost-effectively mitigate threats to <span class="hlt">coral</span> <span class="hlt">reefs</span>, and apply it to the <span class="hlt">Coral</span> Triangle, an area of significant global attention and funding. Using information on threats to marine <span class="hlt">ecosystems</span>, effectiveness of management actions at abating threats, and the management and opportunity costs of actions, we calculate the rate of return on investment in two conservation actions in sixteen ecoregions. We discover that marine conservation almost always trumps terrestrial conservation within any ecoregion, but terrestrial conservation in one ecoregion can be a better investment than marine conservation in another. We show how these results could be used to allocate a limited budget for conservation and compare them to priorities based on individual criteria. Conclusions/Significance Previous prioritization approaches do not consider both land and sea-based threats or the socioeconomic costs of conserving <span class="hlt">coral</span> <span class="hlt">reefs</span>. A simple and transparent approach like ours is essential to support effective <span class="hlt">coral</span> <span class="hlt">reef</span> conservation decisions in a large and diverse region like the <span class="hlt">Coral</span> Triangle, but can be applied at any scale and to other marine <span class="hlt">ecosystems</span>. PMID:20814570</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23140101','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23140101"><span>The wicked problem of China's disappearing <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hughes, Terry P; Huang, Hui; Young, Matthew A L</p> <p>2013-04-01</p> <p>We examined the development of <span class="hlt">coral</span> <span class="hlt">reef</span> science and the policies, institutions, and governance frameworks for management of <span class="hlt">coral</span> <span class="hlt">reefs</span> in China in order to highlight the wicked problem of preserving <span class="hlt">reefs</span> while simultaneously promoting human development and nation building. China and other sovereign states in the region are experiencing unprecedented economic expansion, rapid population growth, mass migration, widespread coastal development, and loss of habitat. We analyzed a large, fragmented literature on the condition of <span class="hlt">coral</span> <span class="hlt">reefs</span> in China and the disputed territories of the South China Sea. We found that <span class="hlt">coral</span> abundance has declined by at least 80% over the past 30 years on coastal fringing <span class="hlt">reefs</span> along the Chinese mainland and adjoining Hainan Island. On offshore atolls and archipelagos claimed by 6 countries in the South China Sea, <span class="hlt">coral</span> cover has declined from an average of >60% to around 20% within the past 10-15 years. Climate change has affected these <span class="hlt">reefs</span> far less than coastal development, pollution, overfishing, and destructive fishing practices. Ironically, these widespread declines in the condition of <span class="hlt">reefs</span> are unfolding as China's research and <span class="hlt">reef</span>-management capacity are rapidly expanding. Before the loss of <span class="hlt">corals</span> becomes irreversible, governance of China's coastal <span class="hlt">reefs</span> could be improved by increasing public awareness of declining <span class="hlt">ecosystem</span> services, by providing financial support for training of <span class="hlt">reef</span> scientists and managers, by improving monitoring of <span class="hlt">coral</span> <span class="hlt">reef</span> dynamics and condition to better inform policy development, and by enforcing existing regulations that could protect <span class="hlt">coral</span> <span class="hlt">reefs</span>. In the South China Sea, changes in policy and legal frameworks, refinement of governance structures, and cooperation among neighboring countries are urgently needed to develop cooperative management of contested offshore <span class="hlt">reefs</span>. © 2012 Society for Conservation Biology.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27761342','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27761342"><span>Variation in habitat soundscape characteristics influences settlement of a <span class="hlt">reef</span>-building <span class="hlt">coral</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lillis, Ashlee; Bohnenstiehl, DelWayne; Peters, Jason W; Eggleston, David</p> <p>2016-01-01</p> <p><span class="hlt">Coral</span> populations, and the productive <span class="hlt">reef</span> <span class="hlt">ecosystems</span> they support, rely on successful recruitment of <span class="hlt">reef</span>-building species, beginning with settlement of dispersing larvae into habitat favourable to survival. Many substrate cues have been identified as contributors to <span class="hlt">coral</span> larval habitat selection; however, the potential for ambient acoustic cues to influence <span class="hlt">coral</span> settlement responses is unknown. Using in situ settlement chambers that excluded other habitat cues, larval settlement of a dominant Caribbean <span class="hlt">reef</span>-building <span class="hlt">coral</span>, Orbicella faveolata , was compared in response to three local soundscapes, with differing acoustic and habitat properties. Differences between <span class="hlt">reef</span> sites in the number of larvae settled in chambers isolating acoustic cues corresponded to differences in sound levels and <span class="hlt">reef</span> characteristics, with sounds at the loudest <span class="hlt">reef</span> generating significantly higher settlement during trials compared to the quietest site (a 29.5 % increase). These results suggest that soundscapes could be an important influence on <span class="hlt">coral</span> settlement patterns and that acoustic cues associated with <span class="hlt">reef</span> habitat may be related to larval settlement. This study reports an effect of soundscape variation on larval settlement for a key <span class="hlt">coral</span> species, and adds to the growing evidence that soundscapes affect marine <span class="hlt">ecosystems</span> by influencing early life history processes of foundational species.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16904703','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16904703"><span>Quantifying the environmental impacts of artisanal fishing gear on Kenya's <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mangi, S C; Roberts, C M</p> <p>2006-12-01</p> <p>The environmental impacts of artisanal fishing gear on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> were studied in the multi-gear fishery of southern Kenya to evaluate which types of gear have the greatest impact on <span class="hlt">coral</span> <span class="hlt">reef</span> biodiversity. The gear types studied were large and small traps, gill nets, beach seines, hand lines and spear guns. Levels of <span class="hlt">coral</span> damage, proportion of juvenile fish and discards, size and maturity stage at first capture were quantified and compared amongst the gear types. Results indicate that fishers using beach seines, spears and gill nets cause the most direct physical damage to <span class="hlt">corals</span>. Spear fishers showed the highest number of contacts to live <span class="hlt">corals</span> per unit catch followed by fishers using gill nets (12.6+/-1.8 and 5.9+/-2.0 <span class="hlt">coral</span> contacts per kg fish caught per trip respectively). Apart from discarding 6.5% of their daily catch in the sea, as it was too small, beach seine fishers also landed the highest percentage of juvenile fish (68.4+/-15.7%), a proportion significantly higher (p<0.001) than in any other gear. The size and maturity stage at first capture for 150 of 195 species caught by all gear types was well below the lengths at which they mature. For example, 100% of Lethrinus xanthochilus, 99% of Lethrinus nebulosus and 94% of Lethrinus harak caught were juveniles. Across all gear types, 50.1+/-22.7% of the catch consisted of juvenile fish, indicating serious growth overfishing. Field assessment of levels of <span class="hlt">coral</span> density showed that fishing grounds where beach seines were still in use had a significantly lower density than where beach seining was not used. This correlation is likely to arise in part because seines cannot be used in the most <span class="hlt">coral</span> rich areas, and in part because <span class="hlt">coral</span> loss is a consequence of seine use. On a per gear basis therefore, beach seines had the most impact on <span class="hlt">coral</span> <span class="hlt">reef</span> biodiversity. This study emphasizes the need to enforce restrictions on destructive gear and mesh sizes.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70122685','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70122685"><span>African and Asian dust: from desert soils to <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Garrison, Virginia H.; Shinn, Eugene A.; Foreman, William T.; Griffin, Dale W.; Holmes, Charles W.; Kellogg, Christina A.; Majewski, Michael S.; Richardson, Laurie L.; Ritchie, Kim B.; Smith, Garriet W.</p> <p>2003-01-01</p> <p>Many hypotheses have been proposed to explain the decline of <span class="hlt">coral</span> <span class="hlt">reefs</span> throughout the world, but none adequately accounts for the lack of recovery of <span class="hlt">reefs</span> or the wide geographical distribution of <span class="hlt">coral</span> diseases. The processes driving the decline remain elusive. Hundreds of millions of tons of dust transported annually from Africa and Asia to the Americas may be adversely affecting <span class="hlt">coral</span> <span class="hlt">reefs</span> and other downwind <span class="hlt">ecosystems</span>. Viable microorganisms, macro- and micronutrients, trace metals, and an array of organic contaminants carried in the dust air masses and deposited in the oceans and on land may play important roles in the complex changes occurring on <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4846430','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4846430"><span>Are <span class="hlt">coral</span> <span class="hlt">reefs</span> victims of their own past success?</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Renema, Willem; Pandolfi, John M.; Kiessling, Wolfgang; Bosellini, Francesca R.; Klaus, James S.; Korpanty, Chelsea; Rosen, Brian R.; Santodomingo, Nadiezhda; Wallace, Carden C.; Webster, Jody M.; Johnson, Kenneth G.</p> <p>2016-01-01</p> <p>As one of the most prolific and widespread <span class="hlt">reef</span> builders, the staghorn <span class="hlt">coral</span> Acropora holds a disproportionately large role in how <span class="hlt">coral</span> <span class="hlt">reefs</span> will respond to accelerating anthropogenic change. We show that although Acropora has a diverse history extended over the past 50 million years, it was not a dominant <span class="hlt">reef</span> builder until the onset of high-amplitude glacioeustatic sea-level fluctuations 1.8 million years ago. High growth rates and propagation by fragmentation have favored staghorn <span class="hlt">corals</span> since this time. In contrast, staghorn <span class="hlt">corals</span> are among the most vulnerable <span class="hlt">corals</span> to anthropogenic stressors, with marked global loss of abundance worldwide. The continued decline in staghorn <span class="hlt">coral</span> abundance and the mounting challenges from both local stress and climate change will limit the <span class="hlt">coral</span> reefs’ ability to provide <span class="hlt">ecosystem</span> services. PMID:27152330</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4855391','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4855391"><span>Energetic differences between bacterioplankton trophic groups and <span class="hlt">coral</span> <span class="hlt">reef</span> resistance</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>McDole Somera, Tracey; Bailey, Barbara; Barott, Katie; Grasis, Juris; Hatay, Mark; Hilton, Brett J.; Hisakawa, Nao; Nosrat, Bahador; Nulton, James; Silveira, Cynthia B.; Sullivan, Chris; Brainard, Russell E.; Rohwer, Forest</p> <p>2016-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are among the most productive and diverse marine <span class="hlt">ecosystems</span> on the Earth. They are also particularly sensitive to changing energetic requirements by different trophic levels. Microbialization specifically refers to the increase in the energetic metabolic demands of microbes relative to macrobes and is significantly correlated with increasing human influence on <span class="hlt">coral</span> <span class="hlt">reefs</span>. In this study, metabolic theory of ecology is used to quantify the relative contributions of two broad bacterioplankton groups, autotrophs and heterotrophs, to energy flux on 27 Pacific <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> experiencing human impact to varying degrees. The effective activation energy required for photosynthesis is lower than the average energy of activation for the biochemical reactions of the Krebs cycle, and changes in the proportional abundance of these two groups can greatly affect rates of energy and materials cycling. We show that <span class="hlt">reef</span>-water communities with a higher proportional abundance of microbial autotrophs expend more metabolic energy per gram of microbial biomass. Increased energy and materials flux through fast energy channels (i.e. water-column associated microbial autotrophs) may dampen the detrimental effects of increased heterotrophic loads (e.g. <span class="hlt">coral</span> disease) on <span class="hlt">coral</span> <span class="hlt">reef</span> systems experiencing anthropogenic disturbance. PMID:27097927</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27097927','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27097927"><span>Energetic differences between bacterioplankton trophic groups and <span class="hlt">coral</span> <span class="hlt">reef</span> resistance.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>McDole Somera, Tracey; Bailey, Barbara; Barott, Katie; Grasis, Juris; Hatay, Mark; Hilton, Brett J; Hisakawa, Nao; Nosrat, Bahador; Nulton, James; Silveira, Cynthia B; Sullivan, Chris; Brainard, Russell E; Rohwer, Forest</p> <p>2016-04-27</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are among the most productive and diverse marine <span class="hlt">ecosystems</span> on the Earth. They are also particularly sensitive to changing energetic requirements by different trophic levels. Microbialization specifically refers to the increase in the energetic metabolic demands of microbes relative to macrobes and is significantly correlated with increasing human influence on <span class="hlt">coral</span> <span class="hlt">reefs</span>. In this study, metabolic theory of ecology is used to quantify the relative contributions of two broad bacterioplankton groups, autotrophs and heterotrophs, to energy flux on 27 Pacific <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> experiencing human impact to varying degrees. The effective activation energy required for photosynthesis is lower than the average energy of activation for the biochemical reactions of the Krebs cycle, and changes in the proportional abundance of these two groups can greatly affect rates of energy and materials cycling. We show that <span class="hlt">reef</span>-water communities with a higher proportional abundance of microbial autotrophs expend more metabolic energy per gram of microbial biomass. Increased energy and materials flux through fast energy channels (i.e. water-column associated microbial autotrophs) may dampen the detrimental effects of increased heterotrophic loads (e.g. <span class="hlt">coral</span> disease) on <span class="hlt">coral</span> <span class="hlt">reef</span> systems experiencing anthropogenic disturbance. © 2016 The Author(s).</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28696067','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28696067"><span>The contribution of microbial biotechnology to mitigating <span class="hlt">coral</span> <span class="hlt">reef</span> degradation.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Damjanovic, Katarina; Blackall, Linda L; Webster, Nicole S; van Oppen, Madeleine J H</p> <p>2017-09-01</p> <p>The decline of <span class="hlt">coral</span> <span class="hlt">reefs</span> due to anthropogenic disturbances is having devastating impacts on biodiversity and <span class="hlt">ecosystem</span> services. Here we highlight the potential and challenges of microbial manipulation strategies to enhance <span class="hlt">coral</span> tolerance to stress and contribute to <span class="hlt">coral</span> <span class="hlt">reef</span> restoration and protection. © 2017 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29328509','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29328509"><span>High refuge availability on <span class="hlt">coral</span> <span class="hlt">reefs</span> increases the vulnerability of <span class="hlt">reef</span>-associated predators to overexploitation.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Rogers, Alice; Blanchard, Julia L; Newman, Steven P; Dryden, Charlie S; Mumby, Peter J</p> <p>2018-02-01</p> <p>Refuge availability and fishing alter predator-prey interactions on <span class="hlt">coral</span> <span class="hlt">reefs</span>, but our understanding of how they interact to drive food web dynamics, community structure and vulnerability of different trophic groups is unclear. Here, we apply a size-based <span class="hlt">ecosystem</span> model of <span class="hlt">coral</span> <span class="hlt">reefs</span>, parameterized with empirical measures of structural complexity, to predict fish biomass, productivity and community structure in <span class="hlt">reef</span> <span class="hlt">ecosystems</span> under a broad range of refuge availability and fishing regimes. In unfished <span class="hlt">ecosystems</span>, the expected positive correlation between <span class="hlt">reef</span> structural complexity and biomass emerges, but a non-linear effect of predation refuges is observed for the productivity of predatory fish. <span class="hlt">Reefs</span> with intermediate complexity have the highest predator productivity, but when refuge availability is high and prey are less available, predator growth rates decrease, with significant implications for fisheries. Specifically, as fishing intensity increases, predators in habitats with high refuge availability exhibit vulnerability to over-exploitation, resulting in communities dominated by herbivores. Our study reveals mechanisms for threshold dynamics in predators living in complex habitats and elucidates how predators can be food-limited when most of their prey are able to hide. We also highlight the importance of nutrient recycling via the detrital pathway, to support high predator biomasses on <span class="hlt">coral</span> <span class="hlt">reefs</span>. © 2018 by the Ecological Society of America.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25070649','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25070649"><span>How will <span class="hlt">coral</span> <span class="hlt">reef</span> fish communities respond to climate-driven disturbances? Insight from landscape-scale perturbations.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Adam, Thomas C; Brooks, Andrew J; Holbrook, Sally J; Schmitt, Russell J; Washburn, Libe; Bernardi, Giacomo</p> <p>2014-09-01</p> <p>Global climate change is rapidly altering disturbance regimes in many <span class="hlt">ecosystems</span> including <span class="hlt">coral</span> <span class="hlt">reefs</span>, yet the long-term impacts of these changes on <span class="hlt">ecosystem</span> structure and function are difficult to predict. A major <span class="hlt">ecosystem</span> service provided by <span class="hlt">coral</span> <span class="hlt">reefs</span> is the provisioning of physical habitat for other organisms, and consequently, many of the effects of climate change on <span class="hlt">coral</span> <span class="hlt">reefs</span> will be mediated by their impacts on habitat structure. Therefore, there is an urgent need to understand the independent and combined effects of <span class="hlt">coral</span> mortality and loss of physical habitat on <span class="hlt">reef</span>-associated biota. Here, we use a unique series of events affecting the <span class="hlt">coral</span> <span class="hlt">reefs</span> around the Pacific island of Moorea, French Polynesia to differentiate between the impacts of <span class="hlt">coral</span> mortality and the degradation of physical habitat on the structure of <span class="hlt">reef</span> fish communities. We found that, by removing large amounts of physical habitat, a tropical cyclone had larger impacts on <span class="hlt">reef</span> fish communities than an outbreak of <span class="hlt">coral-eating</span> sea stars that caused widespread <span class="hlt">coral</span> mortality but left the physical structure intact. In addition, the impacts of declining structural complexity on <span class="hlt">reef</span> fish assemblages accelerated as structure became increasingly rare. Structure provided by dead <span class="hlt">coral</span> colonies can take up to decades to erode following <span class="hlt">coral</span> mortality, and, consequently, our results suggest that predictions based on short-term studies are likely to grossly underestimate the long-term impacts of <span class="hlt">coral</span> decline on <span class="hlt">reef</span> fish communities.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22870294','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22870294"><span>The influence of <span class="hlt">coral</span> <span class="hlt">reef</span> benthic condition on associated fish assemblages.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Chong-Seng, Karen M; Mannering, Thomas D; Pratchett, Morgan S; Bellwood, David R; Graham, Nicholas A J</p> <p>2012-01-01</p> <p>Accumulative disturbances can erode a <span class="hlt">coral</span> <span class="hlt">reef</span>'s resilience, often leading to replacement of scleractinian <span class="hlt">corals</span> by macroalgae or other non-<span class="hlt">coral</span> organisms. These degraded <span class="hlt">reef</span> systems have been mostly described based on changes in the composition of the <span class="hlt">reef</span> benthos, and there is little understanding of how such changes are influenced by, and in turn influence, other components of the <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. This study investigated the spatial variation in benthic communities on fringing <span class="hlt">reefs</span> around the inner Seychelles islands. Specifically, relationships between benthic composition and the underlying substrata, as well as the associated fish assemblages were assessed. High variability in benthic composition was found among <span class="hlt">reefs</span>, with a gradient from high <span class="hlt">coral</span> cover (up to 58%) and high structural complexity to high macroalgae cover (up to 95%) and low structural complexity at the extremes. This gradient was associated with declining species richness of fishes, reduced diversity of fish functional groups, and lower abundance of corallivorous fishes. There were no reciprocal increases in herbivorous fish abundances, and relationships with other fish functional groups and total fish abundance were weak. <span class="hlt">Reefs</span> grouping at the extremes of complex <span class="hlt">coral</span> habitats or low-complexity macroalgal habitats displayed markedly different fish communities, with only two species of benthic invertebrate feeding fishes in greater abundance in the macroalgal habitat. These results have negative implications for the continuation of many <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> processes and services if more <span class="hlt">reefs</span> shift to extreme degraded conditions dominated by macroalgae.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29422885','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29422885"><span>Community Composition and Transcriptional Activity of Ammonia-Oxidizing Prokaryotes of Seagrass Thalassia hemprichii in <span class="hlt">Coral</span> <span class="hlt">Reef</span> <span class="hlt">Ecosystems</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ling, Juan; Lin, Xiancheng; Zhang, Yanying; Zhou, Weiguo; Yang, Qingsong; Lin, Liyun; Zeng, Siquan; Zhang, Ying; Wang, Cong; Ahmad, Manzoor; Long, Lijuan; Dong, Junde</p> <p>2018-01-01</p> <p>Seagrasses in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> play important ecological roles by enhancing <span class="hlt">coral</span> <span class="hlt">reef</span> resilience under ocean acidification. However, seagrass primary productivity is typically constrained by limited nitrogen availability. Ammonia oxidation is an important process conducted by ammonia-oxidizing archaea (AOA) and bacteria (AOB), yet little information is available concerning the community structure and potential activity of seagrass AOA and AOB. Therefore, this study investigated the variations in the abundance, diversity and transcriptional activity of AOA and AOB at the DNA and transcript level from four sample types: the leaf, root, rhizosphere sediment and bulk sediment of seagrass Thalassia hemprichii in three <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. DNA and complementary DNA (cDNA) were used to prepare clone libraries and DNA and cDNA quantitative PCR ( q PCR) assays, targeting the ammonia monooxygenase-subunit ( amo A) genes as biomarkers. Our results indicated that the closest relatives of the obtained archaeal and bacterial amo A gene sequences recovered from DNA and cDNA libraries mainly originated from the marine environment. Moreover, all the obtained AOB sequences belong to the Nitrosomonadales cluster. Nearly all the AOA communities exhibited higher diversity than the AOB communities at the DNA level, but the q PCR data demonstrated that the abundances of AOB communities were higher than that of AOA communities based on both DNA and RNA transcripts. Collectively, most of the samples shared greater community composition similarity with samples from the same location rather than sample type. Furthermore, the abundance of archaeal amo A gene in rhizosphere sediments showed significant relationships with the ammonium concentration of sediments and the nitrogen content of plant tissue (leaf and root) at the DNA level ( P < 0.05). Conversely, no such relationships were found for the AOB communities. This work provides new insight into the nitrogen cycle, particularly</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012ISPAr39B3..211G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012ISPAr39B3..211G"><span>Image Fusion Applied to Satellite Imagery for the Improved Mapping and Monitoring of <span class="hlt">Coral</span> <span class="hlt">Reefs</span>: a Proposal</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Gholoum, M.; Bruce, D.; Hazeam, S. Al</p> <p>2012-07-01</p> <p>A <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span>, one of the most complex marine environmental systems on the planet, is defined as biologically diverse and immense. It plays an important role in maintaining a vast biological diversity for future generations and functions as an essential spawning, nursery, breeding and feeding ground for many kinds of marine species. In addition, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> provide valuable benefits such as fisheries, ecological goods and services and recreational activities to many communities. However, this valuable resource is highly threatened by a number of environmental changes and anthropogenic impacts that can lead to reduced <span class="hlt">coral</span> growth and production, mass <span class="hlt">coral</span> mortality and loss of <span class="hlt">coral</span> diversity. With the growth of these threats on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, there is a strong management need for mapping and monitoring of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Remote sensing technology can be a valuable tool for mapping and monitoring of these <span class="hlt">ecosystems</span>. However, the diversity and complexity of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, the resolution capabilities of satellite sensors and the low reflectivity of shallow water increases the difficulties to identify and classify its features. This paper reviews the methods used in mapping and monitoring <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. In addition, this paper proposes improved methods for mapping and monitoring <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> based on image fusion techniques. This image fusion techniques will be applied to satellite images exhibiting high spatial and low to medium spectral resolution with images exhibiting low spatial and high spectral resolution. Furthermore, a new method will be developed to fuse hyperspectral imagery with multispectral imagery. The fused image will have a large number of spectral bands and it will have all pairs of corresponding spatial objects. This will potentially help to accurately classify the image data. Accuracy assessment use ground truth will be performed for the selected methods to determine the quality of the</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28090075','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28090075"><span>Virus-host interactions and their roles in <span class="hlt">coral</span> <span class="hlt">reef</span> health and disease.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Thurber, Rebecca Vega; Payet, Jérôme P; Thurber, Andrew R; Correa, Adrienne M S</p> <p>2017-04-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> occur in nutrient-poor shallow waters, constitute biodiversity and productivity hotspots, and are threatened by anthropogenic disturbance. This Review provides an introduction to <span class="hlt">coral</span> <span class="hlt">reef</span> virology and emphasizes the links between viruses, <span class="hlt">coral</span> mortality and <span class="hlt">reef</span> <span class="hlt">ecosystem</span> decline. We describe the distinctive benthic-associated and water-column- associated viromes that are unique to <span class="hlt">coral</span> <span class="hlt">reefs</span>, which have received less attention than viruses in open-ocean systems. We hypothesize that viruses of bacteria and eukaryotes dynamically interact with their hosts in the water column and with scleractinian (stony) <span class="hlt">corals</span> to influence microbial community dynamics, <span class="hlt">coral</span> bleaching and disease, and <span class="hlt">reef</span> biogeochemical cycling. Last, we outline how marine viruses are an integral part of the <span class="hlt">reef</span> system and suggest that the influence of viruses on <span class="hlt">reef</span> function is an essential component of these globally important environments.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27902715','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27902715"><span>Local Stressors, Resilience, and Shifting Baselines on <span class="hlt">Coral</span> <span class="hlt">Reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>McLean, Matthew; Cuetos-Bueno, Javier; Nedlic, Osamu; Luckymiss, Marston; Houk, Peter</p> <p>2016-01-01</p> <p>Understanding how and why <span class="hlt">coral</span> <span class="hlt">reefs</span> have changed over the last twenty to thirty years is crucial for sustaining <span class="hlt">coral-reef</span> resilience. We used a historical baseline from Kosrae, a typical small island in Micronesia, to examine changes in fish and <span class="hlt">coral</span> assemblages since 1986. We found that natural gradients in the spatial distribution of fish and <span class="hlt">coral</span> assemblages have become amplified, as island geography is now a stronger determinant of species abundance patterns, and habitat forming Acropora <span class="hlt">corals</span> and large-bodied fishes that were once common on the leeward side of the island have become scarce. A proxy for fishing access best predicted the relative change in fish assemblage condition over time, and in turn, declining fish condition was the only factor correlated with declining <span class="hlt">coral</span> condition, suggesting overfishing may have reduced <span class="hlt">ecosystem</span> resilience. Additionally, a proxy for watershed pollution predicted modern <span class="hlt">coral</span> assemblage condition, suggesting pollution is also reducing resilience in densely populated areas. Altogether, it appears that unsustainable fishing reduced <span class="hlt">ecosystem</span> resilience, as fish composition has shifted to smaller species in lower trophic levels, driven by losses of large predators and herbivores. While prior literature and anecdotal reports indicate that major disturbance events have been rare in Kosrae, small localized disturbances coupled with reduced resilience may have slowly degraded <span class="hlt">reef</span> condition through time. Improving <span class="hlt">coral-reef</span> resilience in the face of climate change will therefore require improved understanding and management of growing artisanal fishing pressure and watershed pollution.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_6");'>6</a></li> <li><a href="#" onclick='return showDiv("page_7");'>7</a></li> <li class="active"><span>8</span></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_8 --> <div id="page_9" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_7");'>7</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li class="active"><span>9</span></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="161"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5068343','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5068343"><span>Variation in habitat soundscape characteristics influences settlement of a <span class="hlt">reef</span>-building <span class="hlt">coral</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Bohnenstiehl, DelWayne; Peters, Jason W.; Eggleston, David</p> <p>2016-01-01</p> <p><span class="hlt">Coral</span> populations, and the productive <span class="hlt">reef</span> <span class="hlt">ecosystems</span> they support, rely on successful recruitment of <span class="hlt">reef</span>-building species, beginning with settlement of dispersing larvae into habitat favourable to survival. Many substrate cues have been identified as contributors to <span class="hlt">coral</span> larval habitat selection; however, the potential for ambient acoustic cues to influence <span class="hlt">coral</span> settlement responses is unknown. Using in situ settlement chambers that excluded other habitat cues, larval settlement of a dominant Caribbean <span class="hlt">reef</span>-building <span class="hlt">coral</span>, Orbicella faveolata, was compared in response to three local soundscapes, with differing acoustic and habitat properties. Differences between <span class="hlt">reef</span> sites in the number of larvae settled in chambers isolating acoustic cues corresponded to differences in sound levels and <span class="hlt">reef</span> characteristics, with sounds at the loudest <span class="hlt">reef</span> generating significantly higher settlement during trials compared to the quietest site (a 29.5 % increase). These results suggest that soundscapes could be an important influence on <span class="hlt">coral</span> settlement patterns and that acoustic cues associated with <span class="hlt">reef</span> habitat may be related to larval settlement. This study reports an effect of soundscape variation on larval settlement for a key <span class="hlt">coral</span> species, and adds to the growing evidence that soundscapes affect marine <span class="hlt">ecosystems</span> by influencing early life history processes of foundational species. PMID:27761342</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28123092','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28123092"><span>Drivers and predictions of <span class="hlt">coral</span> <span class="hlt">reef</span> carbonate budget trajectories.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Januchowski-Hartley, Fraser A; Graham, Nicholas A J; Wilson, Shaun K; Jennings, Simon; Perry, Chris T</p> <p>2017-01-25</p> <p>Climate change is one of the greatest threats to the long-term maintenance of <span class="hlt">coral</span>-dominated tropical <span class="hlt">ecosystems</span>, and has received considerable attention over the past two decades. <span class="hlt">Coral</span> bleaching and associated mortality events, which are predicted to become more frequent and intense, can alter the balance of different elements that are responsible for <span class="hlt">coral</span> <span class="hlt">reef</span> growth and maintenance. The geomorphic impacts of <span class="hlt">coral</span> mass mortality have received relatively little attention, particularly questions concerning temporal recovery of <span class="hlt">reef</span> carbonate production and the factors that promote resilience of <span class="hlt">reef</span> growth potential. Here, we track the biological carbonate budgets of inner Seychelles <span class="hlt">reefs</span> from 1994 to 2014, spanning the 1998 global bleaching event when these <span class="hlt">reefs</span> lost more than 90% of <span class="hlt">coral</span> cover. All 21 <span class="hlt">reefs</span> had positive budgets in 1994, but in 2005 budgets were predominantly negative. By 2014, carbonate budgets on seven <span class="hlt">reefs</span> were comparable with 1994, but on all <span class="hlt">reefs</span> where an ecological regime shift to macroalgal dominance occurred, budgets remained negative through 2014. <span class="hlt">Reefs</span> with higher massive <span class="hlt">coral</span> cover, lower macroalgae cover and lower excavating parrotfish biomass in 1994 were more likely to have positive budgets post-bleaching. If mortality of <span class="hlt">corals</span> from the 2016 bleaching event is as severe as that of 1998, our predictions based on past trends would suggest that six of eight <span class="hlt">reefs</span> with positive budgets in 2014 would still have positive budgets by 2030. Our results highlight that <span class="hlt">reef</span> accretion and framework maintenance cannot be assumed from the ecological state alone, and that managers should focus on conserving aspects of <span class="hlt">coral</span> <span class="hlt">reefs</span> that support resilient carbonate budgets. © 2017 The Authors.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5310043','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5310043"><span>Drivers and predictions of <span class="hlt">coral</span> <span class="hlt">reef</span> carbonate budget trajectories</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Graham, Nicholas A. J.; Jennings, Simon; Perry, Chris T.</p> <p>2017-01-01</p> <p>Climate change is one of the greatest threats to the long-term maintenance of <span class="hlt">coral</span>-dominated tropical <span class="hlt">ecosystems</span>, and has received considerable attention over the past two decades. <span class="hlt">Coral</span> bleaching and associated mortality events, which are predicted to become more frequent and intense, can alter the balance of different elements that are responsible for <span class="hlt">coral</span> <span class="hlt">reef</span> growth and maintenance. The geomorphic impacts of <span class="hlt">coral</span> mass mortality have received relatively little attention, particularly questions concerning temporal recovery of <span class="hlt">reef</span> carbonate production and the factors that promote resilience of <span class="hlt">reef</span> growth potential. Here, we track the biological carbonate budgets of inner Seychelles <span class="hlt">reefs</span> from 1994 to 2014, spanning the 1998 global bleaching event when these <span class="hlt">reefs</span> lost more than 90% of <span class="hlt">coral</span> cover. All 21 <span class="hlt">reefs</span> had positive budgets in 1994, but in 2005 budgets were predominantly negative. By 2014, carbonate budgets on seven <span class="hlt">reefs</span> were comparable with 1994, but on all <span class="hlt">reefs</span> where an ecological regime shift to macroalgal dominance occurred, budgets remained negative through 2014. <span class="hlt">Reefs</span> with higher massive <span class="hlt">coral</span> cover, lower macroalgae cover and lower excavating parrotfish biomass in 1994 were more likely to have positive budgets post-bleaching. If mortality of <span class="hlt">corals</span> from the 2016 bleaching event is as severe as that of 1998, our predictions based on past trends would suggest that six of eight <span class="hlt">reefs</span> with positive budgets in 2014 would still have positive budgets by 2030. Our results highlight that <span class="hlt">reef</span> accretion and framework maintenance cannot be assumed from the ecological state alone, and that managers should focus on conserving aspects of <span class="hlt">coral</span> <span class="hlt">reefs</span> that support resilient carbonate budgets. PMID:28123092</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3411644','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3411644"><span>The Influence of <span class="hlt">Coral</span> <span class="hlt">Reef</span> Benthic Condition on Associated Fish Assemblages</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Chong-Seng, Karen M.; Mannering, Thomas D.; Pratchett, Morgan S.; Bellwood, David R.; Graham, Nicholas A. J.</p> <p>2012-01-01</p> <p>Accumulative disturbances can erode a <span class="hlt">coral</span> reef’s resilience, often leading to replacement of scleractinian <span class="hlt">corals</span> by macroalgae or other non-<span class="hlt">coral</span> organisms. These degraded <span class="hlt">reef</span> systems have been mostly described based on changes in the composition of the <span class="hlt">reef</span> benthos, and there is little understanding of how such changes are influenced by, and in turn influence, other components of the <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. This study investigated the spatial variation in benthic communities on fringing <span class="hlt">reefs</span> around the inner Seychelles islands. Specifically, relationships between benthic composition and the underlying substrata, as well as the associated fish assemblages were assessed. High variability in benthic composition was found among <span class="hlt">reefs</span>, with a gradient from high <span class="hlt">coral</span> cover (up to 58%) and high structural complexity to high macroalgae cover (up to 95%) and low structural complexity at the extremes. This gradient was associated with declining species richness of fishes, reduced diversity of fish functional groups, and lower abundance of corallivorous fishes. There were no reciprocal increases in herbivorous fish abundances, and relationships with other fish functional groups and total fish abundance were weak. <span class="hlt">Reefs</span> grouping at the extremes of complex <span class="hlt">coral</span> habitats or low-complexity macroalgal habitats displayed markedly different fish communities, with only two species of benthic invertebrate feeding fishes in greater abundance in the macroalgal habitat. These results have negative implications for the continuation of many <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> processes and services if more <span class="hlt">reefs</span> shift to extreme degraded conditions dominated by macroalgae. PMID:22870294</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.usgs.gov/fs/2010/3103/','USGSPUBS'); return false;" href="https://pubs.usgs.gov/fs/2010/3103/"><span>St. Petersburg Coastal and Marine Science Center <span class="hlt">coral</span> <span class="hlt">reef</span> research</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Poore, Richard Z.; Kuffner, Ilsa B.; Kellogg, Christina A.</p> <p>2010-01-01</p> <p>The U.S. Geological Survey (USGS) <span class="hlt">Coral</span> <span class="hlt">Reef</span> <span class="hlt">Ecosystem</span> STudies (CREST) Project specifically addresses priorities identified in the 'Facing tomorrow's challenges' U.S. Geological Survey science in the decade 2007-2017' document (USGS, 2007). Research includes a blend of historical, monitoring, and process studies aimed at improving our understanding of the development, current status and function, as well as likely future changes in <span class="hlt">coral</span> <span class="hlt">ecosystems</span>. Topics such as habitat characterization and distribution, <span class="hlt">coral</span> disease, and trends in biogenic calcification are major focus areas. We seek to increase the understanding of <span class="hlt">reef</span> structure, ecological integrity, and responses to global change.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1569462','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1569462"><span>Measuring <span class="hlt">coral</span> <span class="hlt">reef</span> decline through meta-analyses</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Côté, I.M; Gill, J.A; Gardner, T.A; Watkinson, A.R</p> <p>2005-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are in decline worldwide, owing to a variety of anthropogenic and natural causes. One of the most obvious signals of <span class="hlt">reef</span> degradation is a reduction in live <span class="hlt">coral</span> cover. Past and current rates of loss of <span class="hlt">coral</span> are known for many individual <span class="hlt">reefs</span>; however, until recently, no large-scale estimate was available. In this paper, we show how meta-analysis can be used to integrate existing small-scale estimates of change in <span class="hlt">coral</span> and macroalgal cover, derived from in situ surveys of <span class="hlt">reefs</span>, to generate a robust assessment of long-term patterns of large-scale ecological change. Using a large dataset from Caribbean <span class="hlt">reefs</span>, we examine the possible biases inherent in meta-analytical studies and the sensitivity of the method to patchiness in data availability. Despite the fact that our meta-analysis included studies that used a variety of sampling methods, the regional estimate of change in <span class="hlt">coral</span> cover we obtained is similar to that generated by a standardized survey programme that was implemented in 1991 in the Caribbean. We argue that for habitat types that are regularly and reasonably well surveyed in the course of ecological or conservation research, meta-analysis offers a cost-effective and rapid method for generating robust estimates of past and current states. PMID:15814352</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://www.int-res.com/abstracts/meps/v538/p35-52/','USGSPUBS'); return false;" href="http://www.int-res.com/abstracts/meps/v538/p35-52/"><span>Community metabolism in shallow <span class="hlt">coral</span> <span class="hlt">reef</span> and seagrass <span class="hlt">ecosystems</span>, lower Florida Keys</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Turk, Daniela; Yates, Kimberly K.; Vega-Rodriguez, Maria; Toro-Farmer, Gerardo; L'Esperance, Chris; Melo, Nelson; Ramsewak, Deanesch; Estrada, S. Cerdeira; Muller-Karger, Frank E.; Herwitz, Stan R.; McGillis, Wade</p> <p>2016-01-01</p> <p>Diurnal variation of net community production (NEP) and net community calcification (NEC) were measured in <span class="hlt">coral</span> <span class="hlt">reef</span> and seagrass biomes during October 2012 in the lower Florida Keys using a mesocosm enclosure and the oxygen gradient flux technique. Seagrass and <span class="hlt">coral</span> <span class="hlt">reef</span> sites showed diurnal variations of NEP and NEC, with positive values at near-seafloor light levels >100–300 µEinstein m-2 s-1. During daylight hours, we detected an average NEP of 12.3 and 8.6 mmol O2 m-2 h-1 at the seagrass and <span class="hlt">coral</span> <span class="hlt">reef</span> site, respectively. At night, NEP at the seagrass site was relatively constant, while on the <span class="hlt">coral</span> <span class="hlt">reef</span>, net respiration was highest immediately after dusk and decreased during the rest of the night. At the seagrass site, NEC values ranged from 0.20 g CaCO3 m-2 h-1 during daylight to -0.15 g CaCO3 m-2 h-1 at night, and from 0.17 to -0.10 g CaCO3 m-2 h-1 at the <span class="hlt">coral</span> <span class="hlt">reef</span> site. There were no significant differences in pH and aragonite saturation states (Ωar) between the seagrass and <span class="hlt">coral</span> <span class="hlt">reef</span> sites. Decrease in light levels during thunderstorms significantly decreased NEP, transforming the system from net autotrophic to net heterotrophic.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5090207','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5090207"><span><span class="hlt">Coral</span> <span class="hlt">Reef</span> Resilience, Tipping Points and the Strength of Herbivory</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Holbrook, Sally J.; Schmitt, Russell J.; Adam, Thomas C.; Brooks, Andrew J.</p> <p>2016-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> increasingly are undergoing transitions from <span class="hlt">coral</span> to macroalgal dominance. Although the functional roles of <span class="hlt">reef</span> herbivores in controlling algae are becoming better understood, identifying possible tipping points in the herbivory-macroalgae relationships has remained a challenge. Assessment of where any <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> lies in relation to the <span class="hlt">coral</span>-to-macroalgae tipping point is fundamental to understanding resilience properties, forecasting state shifts, and developing effective management practices. We conducted a multi-year field experiment in Moorea, French Polynesia to estimate these properties. While we found a sharp herbivory threshold where macroalgae escape control, ambient levels of herbivory by <span class="hlt">reef</span> fishes were well above that needed to prevent proliferation of macroalgae. These findings are consistent with previously observed high resilience of the fore <span class="hlt">reef</span> in Moorea. Our approach can identify vulnerable <span class="hlt">coral</span> <span class="hlt">reef</span> systems in urgent need of management action to both forestall shifts to macroalgae and preserve properties essential for resilience. PMID:27804977</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27804977','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27804977"><span><span class="hlt">Coral</span> <span class="hlt">Reef</span> Resilience, Tipping Points and the Strength of Herbivory.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Holbrook, Sally J; Schmitt, Russell J; Adam, Thomas C; Brooks, Andrew J</p> <p>2016-11-02</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> increasingly are undergoing transitions from <span class="hlt">coral</span> to macroalgal dominance. Although the functional roles of <span class="hlt">reef</span> herbivores in controlling algae are becoming better understood, identifying possible tipping points in the herbivory-macroalgae relationships has remained a challenge. Assessment of where any <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> lies in relation to the <span class="hlt">coral</span>-to-macroalgae tipping point is fundamental to understanding resilience properties, forecasting state shifts, and developing effective management practices. We conducted a multi-year field experiment in Moorea, French Polynesia to estimate these properties. While we found a sharp herbivory threshold where macroalgae escape control, ambient levels of herbivory by <span class="hlt">reef</span> fishes were well above that needed to prevent proliferation of macroalgae. These findings are consistent with previously observed high resilience of the fore <span class="hlt">reef</span> in Moorea. Our approach can identify vulnerable <span class="hlt">coral</span> <span class="hlt">reef</span> systems in urgent need of management action to both forestall shifts to macroalgae and preserve properties essential for resilience.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25196132','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25196132"><span>Operationalizing resilience for adaptive <span class="hlt">coral</span> <span class="hlt">reef</span> management under global environmental change.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Anthony, Kenneth R N; Marshall, Paul A; Abdulla, Ameer; Beeden, Roger; Bergh, Chris; Black, Ryan; Eakin, C Mark; Game, Edward T; Gooch, Margaret; Graham, Nicholas A J; Green, Alison; Heron, Scott F; van Hooidonk, Ruben; Knowland, Cheryl; Mangubhai, Sangeeta; Marshall, Nadine; Maynard, Jeffrey A; McGinnity, Peter; McLeod, Elizabeth; Mumby, Peter J; Nyström, Magnus; Obura, David; Oliver, Jamie; Possingham, Hugh P; Pressey, Robert L; Rowlands, Gwilym P; Tamelander, Jerker; Wachenfeld, David; Wear, Stephanie</p> <p>2015-01-01</p> <p>Cumulative pressures from global climate and ocean change combined with multiple regional and local-scale stressors pose fundamental challenges to <span class="hlt">coral</span> <span class="hlt">reef</span> managers worldwide. Understanding how cumulative stressors affect <span class="hlt">coral</span> <span class="hlt">reef</span> vulnerability is critical for successful <span class="hlt">reef</span> conservation now and in the future. In this review, we present the case that strategically managing for increased ecological resilience (capacity for stress resistance and recovery) can reduce <span class="hlt">coral</span> <span class="hlt">reef</span> vulnerability (risk of net decline) up to a point. Specifically, we propose an operational framework for identifying effective management levers to enhance resilience and support management decisions that reduce <span class="hlt">reef</span> vulnerability. Building on a system understanding of biological and ecological processes that drive resilience of <span class="hlt">coral</span> <span class="hlt">reefs</span> in different environmental and socio-economic settings, we present an Adaptive Resilience-Based management (ARBM) framework and suggest a set of guidelines for how and where resilience can be enhanced via management interventions. We argue that press-type stressors (pollution, sedimentation, overfishing, ocean warming and acidification) are key threats to <span class="hlt">coral</span> <span class="hlt">reef</span> resilience by affecting processes underpinning resistance and recovery, while pulse-type (acute) stressors (e.g. storms, bleaching events, crown-of-thorns starfish outbreaks) increase the demand for resilience. We apply the framework to a set of example problems for Caribbean and Indo-Pacific <span class="hlt">reefs</span>. A combined strategy of active risk reduction and resilience support is needed, informed by key management objectives, knowledge of <span class="hlt">reef</span> <span class="hlt">ecosystem</span> processes and consideration of environmental and social drivers. As climate change and ocean acidification erode the resilience and increase the vulnerability of <span class="hlt">coral</span> <span class="hlt">reefs</span> globally, successful adaptive management of <span class="hlt">coral</span> <span class="hlt">reefs</span> will become increasingly difficult. Given limited resources, on-the-ground solutions are likely to focus increasingly on</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4310291','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4310291"><span>Operationalizing resilience for adaptive <span class="hlt">coral</span> <span class="hlt">reef</span> management under global environmental change</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Anthony, Kenneth RN; Marshall, Paul A; Abdulla, Ameer; Beeden, Roger; Bergh, Chris; Black, Ryan; Eakin, C Mark; Game, Edward T; Gooch, Margaret; Graham, Nicholas AJ; Green, Alison; Heron, Scott F; van Hooidonk, Ruben; Knowland, Cheryl; Mangubhai, Sangeeta; Marshall, Nadine; Maynard, Jeffrey A; McGinnity, Peter; McLeod, Elizabeth; Mumby, Peter J; Nyström, Magnus; Obura, David; Oliver, Jamie; Possingham, Hugh P; Pressey, Robert L; Rowlands, Gwilym P; Tamelander, Jerker; Wachenfeld, David; Wear, Stephanie</p> <p>2015-01-01</p> <p>Cumulative pressures from global climate and ocean change combined with multiple regional and local-scale stressors pose fundamental challenges to <span class="hlt">coral</span> <span class="hlt">reef</span> managers worldwide. Understanding how cumulative stressors affect <span class="hlt">coral</span> <span class="hlt">reef</span> vulnerability is critical for successful <span class="hlt">reef</span> conservation now and in the future. In this review, we present the case that strategically managing for increased ecological resilience (capacity for stress resistance and recovery) can reduce <span class="hlt">coral</span> <span class="hlt">reef</span> vulnerability (risk of net decline) up to a point. Specifically, we propose an operational framework for identifying effective management levers to enhance resilience and support management decisions that reduce <span class="hlt">reef</span> vulnerability. Building on a system understanding of biological and ecological processes that drive resilience of <span class="hlt">coral</span> <span class="hlt">reefs</span> in different environmental and socio-economic settings, we present an Adaptive Resilience-Based management (ARBM) framework and suggest a set of guidelines for how and where resilience can be enhanced via management interventions. We argue that press-type stressors (pollution, sedimentation, overfishing, ocean warming and acidification) are key threats to <span class="hlt">coral</span> <span class="hlt">reef</span> resilience by affecting processes underpinning resistance and recovery, while pulse-type (acute) stressors (e.g. storms, bleaching events, crown-of-thorns starfish outbreaks) increase the demand for resilience. We apply the framework to a set of example problems for Caribbean and Indo-Pacific <span class="hlt">reefs</span>. A combined strategy of active risk reduction and resilience support is needed, informed by key management objectives, knowledge of <span class="hlt">reef</span> <span class="hlt">ecosystem</span> processes and consideration of environmental and social drivers. As climate change and ocean acidification erode the resilience and increase the vulnerability of <span class="hlt">coral</span> <span class="hlt">reefs</span> globally, successful adaptive management of <span class="hlt">coral</span> <span class="hlt">reefs</span> will become increasingly difficult. Given limited resources, on-the-ground solutions are likely to focus increasingly on</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4640615','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4640615"><span>Changes in <span class="hlt">coral</span> <span class="hlt">reef</span> communities across a natural gradient in seawater pH</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Barkley, Hannah C.; Cohen, Anne L.; Golbuu, Yimnang; Starczak, Victoria R.; DeCarlo, Thomas M.; Shamberger, Kathryn E. F.</p> <p>2015-01-01</p> <p>Ocean acidification threatens the survival of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> worldwide. The negative effects of ocean acidification observed in many laboratory experiments have been seen in studies of naturally low-pH <span class="hlt">reefs</span>, with little evidence to date for adaptation. Recently, we reported initial data suggesting that low-pH <span class="hlt">coral</span> communities of the Palau Rock Islands appear healthy despite the extreme conditions in which they live. Here, we build on that observation with a comprehensive statistical analysis of benthic communities across Palau’s natural acidification gradient. Our analysis revealed a shift in <span class="hlt">coral</span> community composition but no impact of acidification on <span class="hlt">coral</span> richness, coralline algae abundance, macroalgae cover, <span class="hlt">coral</span> calcification, or skeletal density. However, <span class="hlt">coral</span> bioerosion increased 11-fold as pH decreased from the barrier <span class="hlt">reefs</span> to the Rock Island bays. Indeed, a comparison of the naturally low-pH <span class="hlt">coral</span> <span class="hlt">reef</span> systems studied so far revealed increased bioerosion to be the only consistent feature among them, as responses varied across other indices of <span class="hlt">ecosystem</span> health. Our results imply that whereas community responses may vary, escalation of <span class="hlt">coral</span> <span class="hlt">reef</span> bioerosion and acceleration of a shift from net accreting to net eroding <span class="hlt">reef</span> structures will likely be a global signature of ocean acidification. PMID:26601203</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26601203','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26601203"><span>Changes in <span class="hlt">coral</span> <span class="hlt">reef</span> communities across a natural gradient in seawater pH.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Barkley, Hannah C; Cohen, Anne L; Golbuu, Yimnang; Starczak, Victoria R; DeCarlo, Thomas M; Shamberger, Kathryn E F</p> <p>2015-06-01</p> <p>Ocean acidification threatens the survival of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> worldwide. The negative effects of ocean acidification observed in many laboratory experiments have been seen in studies of naturally low-pH <span class="hlt">reefs</span>, with little evidence to date for adaptation. Recently, we reported initial data suggesting that low-pH <span class="hlt">coral</span> communities of the Palau Rock Islands appear healthy despite the extreme conditions in which they live. Here, we build on that observation with a comprehensive statistical analysis of benthic communities across Palau's natural acidification gradient. Our analysis revealed a shift in <span class="hlt">coral</span> community composition but no impact of acidification on <span class="hlt">coral</span> richness, coralline algae abundance, macroalgae cover, <span class="hlt">coral</span> calcification, or skeletal density. However, <span class="hlt">coral</span> bioerosion increased 11-fold as pH decreased from the barrier <span class="hlt">reefs</span> to the Rock Island bays. Indeed, a comparison of the naturally low-pH <span class="hlt">coral</span> <span class="hlt">reef</span> systems studied so far revealed increased bioerosion to be the only consistent feature among them, as responses varied across other indices of <span class="hlt">ecosystem</span> health. Our results imply that whereas community responses may vary, escalation of <span class="hlt">coral</span> <span class="hlt">reef</span> bioerosion and acceleration of a shift from net accreting to net eroding <span class="hlt">reef</span> structures will likely be a global signature of ocean acidification.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28067281','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28067281"><span>Spatial competition dynamics between <span class="hlt">reef</span> <span class="hlt">corals</span> under ocean acidification.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Horwitz, Rael; Hoogenboom, Mia O; Fine, Maoz</p> <p>2017-01-09</p> <p>Climate change, including ocean acidification (OA), represents a major threat to <span class="hlt">coral-reef</span> <span class="hlt">ecosystems</span>. Although previous experiments have shown that OA can negatively affect the fitness of <span class="hlt">reef</span> <span class="hlt">corals</span>, these have not included the long-term effects of competition for space on <span class="hlt">coral</span> growth rates. Our multispecies year-long study subjected <span class="hlt">reef</span>-building <span class="hlt">corals</span> from the Gulf of Aqaba (Red Sea) to competitive interactions under present-day ocean pH (pH 8.1) and predicted end-of-century ocean pH (pH 7.6). Results showed <span class="hlt">coral</span> growth is significantly impeded by OA under intraspecific competition for five out of six study species. Reduced growth from OA, however, is negligible when growth is already suppressed in the presence of interspecific competition. Using a spatial competition model, our analysis indicates shifts in the competitive hierarchy and a decrease in overall <span class="hlt">coral</span> cover under lowered pH. Collectively, our case study demonstrates how modified competitive performance under increasing OA will in all likelihood change the composition, structure and functionality of <span class="hlt">reef</span> <span class="hlt">coral</span> communities.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017NatSR...740288H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017NatSR...740288H"><span>Spatial competition dynamics between <span class="hlt">reef</span> <span class="hlt">corals</span> under ocean acidification</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Horwitz, Rael; Hoogenboom, Mia O.; Fine, Maoz</p> <p>2017-01-01</p> <p>Climate change, including ocean acidification (OA), represents a major threat to <span class="hlt">coral-reef</span> <span class="hlt">ecosystems</span>. Although previous experiments have shown that OA can negatively affect the fitness of <span class="hlt">reef</span> <span class="hlt">corals</span>, these have not included the long-term effects of competition for space on <span class="hlt">coral</span> growth rates. Our multispecies year-long study subjected <span class="hlt">reef</span>-building <span class="hlt">corals</span> from the Gulf of Aqaba (Red Sea) to competitive interactions under present-day ocean pH (pH 8.1) and predicted end-of-century ocean pH (pH 7.6). Results showed <span class="hlt">coral</span> growth is significantly impeded by OA under intraspecific competition for five out of six study species. Reduced growth from OA, however, is negligible when growth is already suppressed in the presence of interspecific competition. Using a spatial competition model, our analysis indicates shifts in the competitive hierarchy and a decrease in overall <span class="hlt">coral</span> cover under lowered pH. Collectively, our case study demonstrates how modified competitive performance under increasing OA will in all likelihood change the composition, structure and functionality of <span class="hlt">reef</span> <span class="hlt">coral</span> communities.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5220319','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5220319"><span>Spatial competition dynamics between <span class="hlt">reef</span> <span class="hlt">corals</span> under ocean acidification</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Horwitz, Rael; Hoogenboom, Mia O.; Fine, Maoz</p> <p>2017-01-01</p> <p>Climate change, including ocean acidification (OA), represents a major threat to <span class="hlt">coral-reef</span> <span class="hlt">ecosystems</span>. Although previous experiments have shown that OA can negatively affect the fitness of <span class="hlt">reef</span> <span class="hlt">corals</span>, these have not included the long-term effects of competition for space on <span class="hlt">coral</span> growth rates. Our multispecies year-long study subjected <span class="hlt">reef</span>-building <span class="hlt">corals</span> from the Gulf of Aqaba (Red Sea) to competitive interactions under present-day ocean pH (pH 8.1) and predicted end-of-century ocean pH (pH 7.6). Results showed <span class="hlt">coral</span> growth is significantly impeded by OA under intraspecific competition for five out of six study species. Reduced growth from OA, however, is negligible when growth is already suppressed in the presence of interspecific competition. Using a spatial competition model, our analysis indicates shifts in the competitive hierarchy and a decrease in overall <span class="hlt">coral</span> cover under lowered pH. Collectively, our case study demonstrates how modified competitive performance under increasing OA will in all likelihood change the composition, structure and functionality of <span class="hlt">reef</span> <span class="hlt">coral</span> communities. PMID:28067281</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/FR-2012-07-05/pdf/2012-16472.pdf','FEDREG'); return false;" href="https://www.gpo.gov/fdsys/pkg/FR-2012-07-05/pdf/2012-16472.pdf"><span>77 FR 39724 - U.S. <span class="hlt">Coral</span> <span class="hlt">Reef</span> Task Force Public Meeting and Public Comment</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collection.action?collectionCode=FR">Federal Register 2010, 2011, 2012, 2013, 2014</a></p> <p></p> <p>2012-07-05</p> <p>...-DS61200000] U.S. <span class="hlt">Coral</span> <span class="hlt">Reef</span> Task Force Public Meeting and Public Comment AGENCY: Fish and Wildlife Service... Wildlife Service (Service), announce a public meeting of the U.S. <span class="hlt">Coral</span> <span class="hlt">Reef</span> Task Force (USCRTF) and a... strengthen U.S. government actions to better preserve and protect <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. The Departments of...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28623288','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28623288"><span>Seabirds supply nitrogen to <span class="hlt">reef</span>-building <span class="hlt">corals</span> on remote Pacific islets.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lorrain, Anne; Houlbrèque, Fanny; Benzoni, Francesca; Barjon, Lucie; Tremblay-Boyer, Laura; Menkes, Christophe; Gillikin, David P; Payri, Claude; Jourdan, Hervé; Boussarie, Germain; Verheyden, Anouk; Vidal, Eric</p> <p>2017-06-16</p> <p>Seabirds concentrate nutrients from large marine areas on their nesting islands playing an important ecological role in nutrient transfer between marine and terrestrial <span class="hlt">ecosystems</span>. Here we investigate the role of guano on <span class="hlt">corals</span> <span class="hlt">reefs</span> across scales by analyzing the stable nitrogen isotopic (δ 15 N) values of the scleractinian <span class="hlt">coral</span> Pocillopora damicornis on fringing <span class="hlt">reefs</span> around two Pacific remote islets with large seabird colonies. Marine stations closest to the seabird colonies had higher nitrate + nitrite concentrations compared to more distant stations. <span class="hlt">Coral</span> and zooxanthellae δ 15 N values were also higher at these sites, suggesting that guano-derived nitrogen is assimilated into <span class="hlt">corals</span> and contributes to their nitrogen requirements. The spatial extent of guano influence was however restricted to a local scale. Our results demonstrate that seabird-derived nutrients not only spread across the terrestrial <span class="hlt">ecosystem</span>, but also affect components of the adjacent marine <span class="hlt">ecosystem</span>. Further studies are now needed to assess if this nutrient input has a positive or negative effect for <span class="hlt">corals</span>. Such studies on remote islets also open fresh perspectives to understand how nutrients affect <span class="hlt">coral</span> <span class="hlt">reefs</span> isolated from other anthropogenic stressors.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19052888','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19052888"><span>Development and implementation of <span class="hlt">coral</span> <span class="hlt">reef</span> biocriteria in U.S. jurisdictions.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bradley, Patricia; Fisher, William S; Bell, Heidi; Davis, Wayne; Chan, Valerie; LoBue, Charles; Wiltse, Wendy</p> <p>2009-03-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> worldwide are declining at an alarming rate and are under continuous threat from both natural and anthropogenic environmental stressors. Warmer sea temperatures attributed to global climate change and numerous human activities at local scales place these valuable <span class="hlt">ecosystems</span> at risk. <span class="hlt">Reefs</span> provide numerous services, including shoreline protection, fishing, tourism and biological diversity, which are lost through physical damage, overfishing, and pollution. Pollution can be controlled under provisions of the Clean Water Act, but these options have not been fully employed to protect <span class="hlt">coral</span> <span class="hlt">reefs</span>. No U.S. jurisdiction has implemented <span class="hlt">coral</span> <span class="hlt">reef</span> biocriteria, which are narrative or quantitative water quality standards based on the condition of a biological resource or assemblage. The President's Ocean Action Plan directs the U.S. Environmental Protection Agency (EPA) to develop biological assessment methods and biological criteria for evaluating and maintaining the health of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. EPA has formed the <span class="hlt">Coral</span> <span class="hlt">Reef</span> Biocriteria Working Group (CRBWG) to foster development of <span class="hlt">coral</span> <span class="hlt">reef</span> biocriteria through focused research, evaluation and communication among Agency partners and U.S. jurisdictions. Ongoing CRBWG activities include development and evaluation of a rapid bioassessment protocol for application in biocriteria programs; development of a survey design and monitoring strategy for the U.S. Virgin Islands; comprehensive reviews of biocriteria approaches proposed by states and territories; and assembly of data from a variety of monitoring programs for additional metrics. Guidance documents are being prepared to assist U.S. jurisdictions in reaching protective and defensible biocriteria.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70175026','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70175026"><span>A geological perspective on the degradation and conservation of western Atlantic <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Kuffner, Ilsa B.; Toth, Lauren T.</p> <p>2016-01-01</p> <p>Continuing <span class="hlt">coral-reef</span> degradation in the western Atlantic is resulting in loss of ecological and geologic functions of <span class="hlt">reefs</span>. With the goal of assisting resource managers and stewards of <span class="hlt">reefs</span> in setting and measuring progress toward realistic goals for <span class="hlt">coral-reef</span> conservation and restoration, we examined <span class="hlt">reef</span> degradation in this region from a geological perspective. The importance of <span class="hlt">ecosystem</span> services provided by <span class="hlt">coral</span> reefs—as breakwaters that dissipate wave energy and protect shorelines and as providers of habitat for innumerable species—cannot be overstated. However, the few <span class="hlt">coral</span> species responsible for <span class="hlt">reef</span> building in the western Atlantic during the last approximately 1.5 million years are not thriving in the 21st century. These species are highly sensitive to abrupt temperature extremes, prone to disease infection, and have low sexual reproductive potential. Their vulnerability and the low functional redundancy of branching <span class="hlt">corals</span> have led to the low resilience of western Atlantic <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. The decrease in live <span class="hlt">coral</span> cover over the last 50 years highlights the need for study of relict (senescent) <span class="hlt">reefs</span>, which, from the perspective of coastline protection and habitat structure, may be just as important to conserve as the living <span class="hlt">coral</span> veneer. Research is needed to characterize the geological processes of bioerosion, <span class="hlt">reef</span> cementation, and sediment transport as they relate to modern-day changes in <span class="hlt">reef</span> elevation. For example, although parrotfish remove nuisance macroalgae, possibly promoting <span class="hlt">coral</span> recruitment, they will not save Atlantic <span class="hlt">reefs</span> from geological degradation. In fact, these fish are quickly nibbling away significant quantities of Holocene <span class="hlt">reef</span> framework. The question of how different biota covering dead <span class="hlt">reefs</span> affect framework resistance to biological and physical erosion needs to be addressed. Monitoring and managing <span class="hlt">reefs</span> with respect to physical resilience, in addition to ecological resilience, could optimize the expenditure of</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_7");'>7</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li class="active"><span>9</span></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_9 --> <div id="page_10" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li class="active"><span>10</span></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="181"> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSEC23B..07H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSEC23B..07H"><span><span class="hlt">Coral</span> <span class="hlt">Reef</span> Color: Remote and In-Situ Imaging Spectroscopy of <span class="hlt">Reef</span> Structure and Function</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Hochberg, E. J.</p> <p>2016-02-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of <span class="hlt">coral</span> <span class="hlt">reef</span> condition — proportional cover of living <span class="hlt">coral</span> — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts <span class="hlt">reef</span> condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on <span class="hlt">reef</span> condition at regional to global scales. Discrimination between <span class="hlt">coral</span> and other <span class="hlt">reef</span> benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for <span class="hlt">reef</span> primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. <span class="hlt">Reef</span> calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of <span class="hlt">reef</span> function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of <span class="hlt">reef</span> structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict <span class="hlt">reef</span> futures in the era of global change. This final point is the objective of <span class="hlt">CORAL</span> (<span class="hlt">COral</span> <span class="hlt">Reef</span> Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between <span class="hlt">coral</span> <span class="hlt">reef</span> condition at the <span class="hlt">ecosystem</span> scale and various nominal biogeophysical forcing parameters.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMGC22D..01H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMGC22D..01H"><span><span class="hlt">Coral</span> <span class="hlt">Reef</span> Color: Remote and In-Situ Imaging Spectroscopy of <span class="hlt">Reef</span> Structure and Function</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Hochberg, E. J.</p> <p>2015-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are threatened at local to global scales by a litany of anthropogenic impacts, including overfishing, coastal development, marine and watershed pollution, rising ocean temperatures, and ocean acidification. However, available data for the primary indicator of <span class="hlt">coral</span> <span class="hlt">reef</span> condition — proportional cover of living <span class="hlt">coral</span> — are surprisingly sparse and show patterns that contradict the prevailing understanding of how environment impacts <span class="hlt">reef</span> condition. Remote sensing is the only available tool for acquiring synoptic, uniform data on <span class="hlt">reef</span> condition at regional to global scales. Discrimination between <span class="hlt">coral</span> and other <span class="hlt">reef</span> benthos relies on narrow wavebands afforded by imaging spectroscopy. The same spectral information allows non-invasive quantification of photosynthetic pigment composition, which shows unexpected phenological trends. There is also potential to link biodiversity with optical diversity, though there has been no effort in that direction. Imaging spectroscopy underlies the light-use efficiency model for <span class="hlt">reef</span> primary production by quantifying light capture, which in turn indicates biochemical capacity for CO2 assimilation. <span class="hlt">Reef</span> calcification is strongly correlated with primary production, suggesting the possibility for an optics-based model of that aspect of <span class="hlt">reef</span> function, as well. By scaling these spectral models for use with remote sensing, we can vastly improve our understanding of <span class="hlt">reef</span> structure, function, and overall condition across regional to global scales. By analyzing those remote sensing products against ancillary environmental data, we can construct secondary models to predict <span class="hlt">reef</span> futures in the era of global change. This final point is the objective of <span class="hlt">CORAL</span> (<span class="hlt">COral</span> <span class="hlt">Reef</span> Airborne Laboratory), a three-year project funded under NASA's Earth Venture Suborbital-2 program to investigate the relationship between <span class="hlt">coral</span> <span class="hlt">reef</span> condition at the <span class="hlt">ecosystem</span> scale and various nominal biogeophysical forcing parameters.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23768796','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23768796"><span>The growth of <span class="hlt">coral</span> <span class="hlt">reef</span> science in the Gulf: a historical perspective.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Burt, John A</p> <p>2013-07-30</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> science has grown exponentially in recent decades in the Gulf. Analysis of literature from 1950 to 2012 identified 270 publications on <span class="hlt">coral</span> <span class="hlt">reefs</span> in the Gulf, half of which were published in just the past decade. This paper summarizes the growth and evolution of <span class="hlt">coral</span> <span class="hlt">reef</span> science in the Gulf by examining when, where and how research has been conducted on Gulf <span class="hlt">reefs</span>, who conducted that research, and what themes and taxa have dominated scientific interest. The results demonstrate that there has been significant growth in our understanding of the valuable <span class="hlt">coral</span> <span class="hlt">reefs</span> of the Gulf, but also highlight the fact that we are documenting an increasingly degraded <span class="hlt">ecosystem</span>. <span class="hlt">Reef</span> scientists must make a concerted effort to improve dialogue with regional <span class="hlt">reef</span> management and decision-makers if we are to stem the tide of decline in <span class="hlt">coral</span> <span class="hlt">reefs</span> in the Gulf. Copyright © 2013 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2011HMR....65...67A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2011HMR....65...67A"><span>Heavy metals distribution in the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> of the Northern Red Sea</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ali, Abdel-Hamid A. M.; Hamed, Mohamed A.; Abd El-Azim, Hoda</p> <p>2011-03-01</p> <p>Concentrations of seven heavy metals (Cu, Zn, Pb, Cd, Ni, Co and Fe) were measured in the seawater, sediments, common scleractinian <span class="hlt">reef</span>-building <span class="hlt">corals</span> and soft <span class="hlt">corals</span> (Octocorallia : Alcyonacea) at seven <span class="hlt">reef</span> sites in the Northern Red Sea: I (Hurghada), II (Ras Za'farana), III (El-Ain Al-Sukhna), IV (El-Tur), V (Sha'b Rashdan), VI (Sharm El-Sheikh) and VII (Dahab). Levels of heavy metals were considerably elevated in seawater, sediments and <span class="hlt">corals</span> collected from <span class="hlt">reef</span> sites exposed to increased environmental contamination, as a result of diversified natural and anthropogenic inputs. Soft <span class="hlt">corals</span> of genera Lithophyton, Sarcophyton and Sinularia showed higher concentrations of Zn, Pb, Cd and Ni than hard <span class="hlt">coral</span> genera Acropora and Stylophora. Soft <span class="hlt">coral</span> Sarcophyton trocheliophorum collected from El Ain Al-Suhkna (Gulf of Suez) had greater concentration of Cu, followed by hard <span class="hlt">corals</span> Acropora pharaonis and Acropora hemprichi. The elevated levels of Zn, Cd and Ni were reported in the dry tissue of soft <span class="hlt">coral</span> Sinularia spp. On the other hand, the soft <span class="hlt">coral</span> Lithophyton arboreum displayed the highest concentration of Pb at Sha'b Rashdan (Gulf of Suez) and elevated concentration of Zn at Sharm El-Sheikh. Sediments showed significantly higher concentration of Fe than <span class="hlt">corals</span>. The higher levels of Fe in hard <span class="hlt">corals</span> than soft <span class="hlt">corals</span> reflected the incorporation of Fe into the aragonite and the chelation with the organic matrix of the skeleton. The greater abundance of soft <span class="hlt">corals</span> in metal-contaminated <span class="hlt">reef</span> sites and the elevated levels of metals in their tissue suggesting that the soft <span class="hlt">corals</span> could develop a tolerance mechanism to relatively high concentrations of metals. Although the effects of heavy metals on <span class="hlt">reef</span> <span class="hlt">corals</span> were not isolated from the possible effects of other stresses, the percentage cover of dead <span class="hlt">corals</span> were significantly higher as the concentrations of heavy metals increased.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/11827117','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/11827117"><span>Derelict fishing gear in the northwestern Hawaiian Islands: diving surveys and debris removal in 1999 confirm threat to <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Donohue, M J; Boland, R C; Sramek, C M; Antonelis, G A</p> <p>2001-12-01</p> <p>Marine debris threatens Northwestern Hawaiian Islands' (NWHI) <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Debris, a contaminant, entangles and kills endangered Hawaiian monk seals (Monachus schauinslandi), <span class="hlt">coral</span>, and other wildlife. We describe a novel multi-agency effort using divers to systematically survey and remove derelict fishing gear from two NWHI in 1999. 14 t of derelict fishing gear were removed and debris distribution, density, type and fouling level documented at Lisianski Island and Pearl and Hermes Atoll. <span class="hlt">Reef</span> debris density ranged from 3.4 to 62.2 items/km2. Trawl netting was the most frequent debris type encountered (88%) and represented the greatest debris component recovered by weight (35%), followed by monofilament gillnet (34%), and maritime line (23%). Most debris recovered, 72%, had light or no fouling, suggesting debris may have short oceanic circulation histories. Our study demonstrates that derelict fishing gear poses a persistent threat to the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> of the Hawaiian Archipelago.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2011EOSTr..92R.116T','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2011EOSTr..92R.116T"><span>Research Spotlight: New method to assess <span class="hlt">coral</span> <span class="hlt">reef</span> health</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Tretkoff, Ernie</p> <p>2011-03-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> around the world are becoming stressed due to rising temperatures, ocean acidification, overfishing, and other factors. Measuring community level rates of photosynthesis, respiration, and biogenic calcification is essential to assessing the health of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> because the balance between these processes determines the potential for <span class="hlt">reef</span> growth and the export of carbon. Measurements of biological productivity have typically been made by tracing changes in dissolved oxygen in seawater as it passes over a <span class="hlt">reef</span>. However, this is a labor-intensive and difficult method, requiring repeated measurements. (Geophysical Research Letters, doi:10.1029/2010GL046179, 2011)</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26910945','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26910945"><span>Fish-derived nutrient hotspots shape <span class="hlt">coral</span> <span class="hlt">reef</span> benthic communities.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Shantz, Andrew A; Ladd, Mark C; Schrack, Elizabeth; Burkepile, Deron E</p> <p>2015-12-01</p> <p>Animal-derived nutrients play an important role in structuring nutrient regimes within and between <span class="hlt">ecosystems</span>. When animals undergo repetitive, aggregating behavior through time, they can create nutrient hotspots where rates of biogeochemical activity are higher than those found in the surrounding environment. In turn, these hotspots can influence <span class="hlt">ecosystem</span> processes and community structure. We examined the potential for <span class="hlt">reef</span> fishes from the family Haemulidae (grunts) to create nutrient hotspots and the potential impact of these hotspots on <span class="hlt">reef</span> communities. To do so, we tracked the schooling locations of diurnally migrating grunts, which shelter at <span class="hlt">reef</span> sites during the day but forage off <span class="hlt">reef</span> each night, and measured the impact of these fish schools on benthic communities. We found that grunt schools showed a high degree of site fidelity, repeatedly returning to the same <span class="hlt">coral</span> heads. These aggregations created nutrient hotspots around <span class="hlt">coral</span> heads where nitrogen and phosphorus delivery was roughly 10 and 7 times the respective rates of delivery to structurally similar sites that lacked schools of these fishes. In turn, grazing rates of herbivorous fishes at grunt-derived hotspots were approximately 3 times those of sites where grunts were rare. These differences in nutrient delivery and grazing led to distinct benthic communities with higher cover of crustose coralline algae and less total algal abundance at grunt aggregation sites. Importantly, <span class="hlt">coral</span> growth was roughly 1.5 times greater at grunt hotspots, likely due to the important nutrient subsidy. Our results suggest that schooling <span class="hlt">reef</span> fish and their nutrient subsidies play an important role in mediating community structure on <span class="hlt">coral</span> <span class="hlt">reefs</span> and that overfishing may have important negative consequences on <span class="hlt">ecosystem</span> functions. As such, management strategies must consider mesopredatory fishes in addition to current protection often offered to herbivores and top-tier predators. Furthermore, our results suggest that</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29146203','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29146203"><span>Responses of <span class="hlt">reef</span> building <span class="hlt">corals</span> to microplastic exposure.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Reichert, Jessica; Schellenberg, Johannes; Schubert, Patrick; Wilke, Thomas</p> <p>2018-06-01</p> <p>Pollution of marine environments with microplastic particles (i.e. plastic fragments <5 mm) has increased rapidly during the last decades. As these particles are mainly of terrestrial origin, coastal <span class="hlt">ecosystems</span> such as <span class="hlt">coral</span> <span class="hlt">reefs</span> are particularly threatened. Recent studies revealed that microplastic ingestion can have adverse effects on marine invertebrates. However, little is known about its effects on small-polyp stony <span class="hlt">corals</span> that are the main framework builders in <span class="hlt">coral</span> <span class="hlt">reefs</span>. The goal of this study is to characterise how different <span class="hlt">coral</span> species I) respond to microplastic particles and whether the exposure might II) lead to health effects. Therefore, six small-polyp stony <span class="hlt">coral</span> species belonging to the genera Acropora, Pocillopora, and Porites were exposed to microplastics (polyethylene, size 37-163 μm, concentration ca. 4000 particles L -1 ) over four weeks, and responses and effects on health were documented. The study showed that the <span class="hlt">corals</span> responded differentially to microplastics. Cleaning mechanisms (direct interaction, mucus production) but also feeding interactions (i.e. interaction with mesenterial filaments, ingestion, and egestion) were observed. Additionally, passive contact through overgrowth was documented. In five of the six studied species, negative effects on health (i.e. bleaching and tissue necrosis) were reported. We here provide preliminary knowledge about <span class="hlt">coral</span>-microplastic-interactions. The results call for further investigations of the effects of realistic microplastic concentrations on growth, reproduction, and survival of stony <span class="hlt">corals</span>. This might lead to a better understanding of resilience capacities in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Copyright © 2017 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29315312','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29315312"><span>Taking the metabolic pulse of the world's <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cyronak, Tyler; Andersson, Andreas J; Langdon, Chris; Albright, Rebecca; Bates, Nicholas R; Caldeira, Ken; Carlton, Renee; Corredor, Jorge E; Dunbar, Rob B; Enochs, Ian; Erez, Jonathan; Eyre, Bradley D; Gattuso, Jean-Pierre; Gledhill, Dwight; Kayanne, Hajime; Kline, David I; Koweek, David A; Lantz, Coulson; Lazar, Boaz; Manzello, Derek; McMahon, Ashly; Meléndez, Melissa; Page, Heather N; Santos, Isaac R; Schulz, Kai G; Shaw, Emily; Silverman, Jacob; Suzuki, Atsushi; Teneva, Lida; Watanabe, Atsushi; Yamamoto, Shoji</p> <p>2018-01-01</p> <p>Worldwide, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are experiencing increasing pressure from a variety of anthropogenic perturbations including ocean warming and acidification, increased sedimentation, eutrophication, and overfishing, which could shift <span class="hlt">reefs</span> to a condition of net calcium carbonate (CaCO3) dissolution and erosion. Herein, we determine the net calcification potential and the relative balance of net organic carbon metabolism (net community production; NCP) and net inorganic carbon metabolism (net community calcification; NCC) within 23 <span class="hlt">coral</span> <span class="hlt">reef</span> locations across the globe. In light of these results, we consider the suitability of using these two metrics developed from total alkalinity (TA) and dissolved inorganic carbon (DIC) measurements collected on different spatiotemporal scales to monitor <span class="hlt">coral</span> <span class="hlt">reef</span> biogeochemistry under anthropogenic change. All <span class="hlt">reefs</span> in this study were net calcifying for the majority of observations as inferred from alkalinity depletion relative to offshore, although occasional observations of net dissolution occurred at most locations. However, <span class="hlt">reefs</span> with lower net calcification potential (i.e., lower TA depletion) could shift towards net dissolution sooner than <span class="hlt">reefs</span> with a higher potential. The percent influence of organic carbon fluxes on total changes in dissolved inorganic carbon (DIC) (i.e., NCP compared to the sum of NCP and NCC) ranged from 32% to 88% and reflected inherent biogeochemical differences between <span class="hlt">reefs</span>. <span class="hlt">Reefs</span> with the largest relative percentage of NCP experienced the largest variability in seawater pH for a given change in DIC, which is directly related to the <span class="hlt">reefs</span> ability to elevate or suppress local pH relative to the open ocean. This work highlights the value of measuring <span class="hlt">coral</span> <span class="hlt">reef</span> carbonate chemistry when evaluating their susceptibility to ongoing global environmental change and offers a baseline from which to guide future conservation efforts aimed at preserving these valuable <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16711060','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16711060"><span>The impact of exploiting grazers (Scaridae) on the dynamics of Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mumby, Peter J</p> <p>2006-04-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> provide a number of <span class="hlt">ecosystem</span> services including coastal defense from storms, the generation of building materials, and fisheries. It is increasingly clear that the management of <span class="hlt">reef</span> resources requires an <span class="hlt">ecosystem</span> approach in which extractive activities are weighed against the needs of the <span class="hlt">ecosystem</span> and its functions rather than solely those of the fishery. Here, I use a spatially explicit simulation model of a Caribbean <span class="hlt">coral</span> <span class="hlt">reef</span> to examine the <span class="hlt">ecosystem</span> requirements for grazing which is primarily conducted by parrotfishes (Scaridae). The model allows the impact of fishing grazers to be assessed in the wider context of other <span class="hlt">ecosystem</span> processes including <span class="hlt">coral</span>-algal competition, hurricanes, and mass extinction of the herbivorous urchin Diadema antillarum. Using a new analytical model of scarid grazing, it is estimated that parrotfishes can only maintain between 10% and 30% of a structurally complex forereef in a grazed state. Predictions from this grazing model were then incorporated into a broader simulation model of the <span class="hlt">ecosystem</span>. Simulations predict that scarid grazing is unable to maintain high levels of <span class="hlt">coral</span> cover (> or = 30%) when severe hurricanes occur on a decadal basis, such as occurs in parts of the northern Caribbean. However, <span class="hlt">reefs</span> can withstand such intense disturbance when grazing is undertaken by both scarids and the urchin Diadema. Scarid grazing is predicted to allow recovery from hurricanes when their incidence falls to 20 years or less (e.g., most of Central and South America). Sensitivity analyses revealed that scarid grazing had the most acute impact on model behavior, and depletion led to the emergence of a stable, algal-dominated community state. Under conditions of heavy grazer depletion, <span class="hlt">coral</span> cover was predicted to decline rapidly from an initial level of 30% to less than 1% within 40 years, even when hurricane frequency was low at 60 years. Depleted grazers caused a population bottleneck in juvenile <span class="hlt">corals</span> in which algal</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24873971','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24873971"><span>Ecohydrodynamics of cold-water <span class="hlt">coral</span> <span class="hlt">reefs</span>: a case study of the Mingulay <span class="hlt">Reef</span> Complex (western Scotland).</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Moreno Navas, Juan; Miller, Peter I; Miller, Peter L; Henry, Lea-Anne; Hennige, Sebastian J; Roberts, J Murray</p> <p>2014-01-01</p> <p>Ecohydrodynamics investigates the hydrodynamic constraints on <span class="hlt">ecosystems</span> across different temporal and spatial scales. Ecohydrodynamics play a pivotal role in the structure and functioning of marine <span class="hlt">ecosystems</span>, however the lack of integrated complex flow models for deep-water <span class="hlt">ecosystems</span> beyond the coastal zone prevents further synthesis in these settings. We present a hydrodynamic model for one of Earth's most biologically diverse deep-water <span class="hlt">ecosystems</span>, cold-water <span class="hlt">coral</span> <span class="hlt">reefs</span>. The Mingulay <span class="hlt">Reef</span> Complex (western Scotland) is an inshore seascape of cold-water <span class="hlt">coral</span> <span class="hlt">reefs</span> formed by the scleractinian <span class="hlt">coral</span> Lophelia pertusa. We applied single-image edge detection and composite front maps using satellite remote sensing, to detect oceanographic fronts and peaks of chlorophyll a values that likely affect food supply to <span class="hlt">corals</span> and other suspension-feeding fauna. We also present a high resolution 3D ocean model to incorporate salient aspects of the regional and local oceanography. Model validation using in situ current speed, direction and sea elevation data confirmed the model's realistic representation of spatial and temporal aspects of circulation at the <span class="hlt">reef</span> complex including a tidally driven current regime, eddies, and downwelling phenomena. This novel combination of 3D hydrodynamic modelling and remote sensing in deep-water <span class="hlt">ecosystems</span> improves our understanding of the temporal and spatial scales of ecological processes occurring in marine systems. The modelled information has been integrated into a 3D GIS, providing a user interface for visualization and interrogation of results that allows wider ecological application of the model and that can provide valuable input for marine biodiversity and conservation applications.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4038632','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4038632"><span>Ecohydrodynamics of Cold-Water <span class="hlt">Coral</span> <span class="hlt">Reefs</span>: A Case Study of the Mingulay <span class="hlt">Reef</span> Complex (Western Scotland)</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Navas, Juan Moreno; Miller, Peter L.; Henry, Lea-Anne; Hennige, Sebastian J.; Roberts, J. Murray</p> <p>2014-01-01</p> <p>Ecohydrodynamics investigates the hydrodynamic constraints on <span class="hlt">ecosystems</span> across different temporal and spatial scales. Ecohydrodynamics play a pivotal role in the structure and functioning of marine <span class="hlt">ecosystems</span>, however the lack of integrated complex flow models for deep-water <span class="hlt">ecosystems</span> beyond the coastal zone prevents further synthesis in these settings. We present a hydrodynamic model for one of Earth's most biologically diverse deep-water <span class="hlt">ecosystems</span>, cold-water <span class="hlt">coral</span> <span class="hlt">reefs</span>. The Mingulay <span class="hlt">Reef</span> Complex (western Scotland) is an inshore seascape of cold-water <span class="hlt">coral</span> <span class="hlt">reefs</span> formed by the scleractinian <span class="hlt">coral</span> Lophelia pertusa. We applied single-image edge detection and composite front maps using satellite remote sensing, to detect oceanographic fronts and peaks of chlorophyll a values that likely affect food supply to <span class="hlt">corals</span> and other suspension-feeding fauna. We also present a high resolution 3D ocean model to incorporate salient aspects of the regional and local oceanography. Model validation using in situ current speed, direction and sea elevation data confirmed the model's realistic representation of spatial and temporal aspects of circulation at the <span class="hlt">reef</span> complex including a tidally driven current regime, eddies, and downwelling phenomena. This novel combination of 3D hydrodynamic modelling and remote sensing in deep-water <span class="hlt">ecosystems</span> improves our understanding of the temporal and spatial scales of ecological processes occurring in marine systems. The modelled information has been integrated into a 3D GIS, providing a user interface for visualization and interrogation of results that allows wider ecological application of the model and that can provide valuable input for marine biodiversity and conservation applications. PMID:24873971</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSAH14A0008Z','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSAH14A0008Z"><span>Ingestion of Microplastics and Their Impact on Calcification in <span class="hlt">Reef</span>-Building <span class="hlt">Corals</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Zink, C. P.; Smith, R. T.</p> <p>2016-02-01</p> <p>Since the early 1970's, researchers began identifying plastics and other sources of litter as harmful to <span class="hlt">ecosystems</span>. In recent years, there's been a growing concern about microscopic plastic debris (microplastics) and its impact on marine organisms. Likewise, microplastics are currently and continuously being documented from environmental samples on a global scale. The <span class="hlt">ecosystems</span> most likely affected by their presence are shallow marine habitats, such as near-shore <span class="hlt">coral</span> <span class="hlt">reefs</span>. One concern is that microplastics may be ingested by <span class="hlt">reef</span>-building <span class="hlt">corals</span> and negatively impact their physiology. In this study, two species of Caribbean <span class="hlt">reef</span>-building <span class="hlt">corals</span>, Orbicella faveolata and Porites porites were investigated for rates of ingesting microplastics. <span class="hlt">Coral</span> samples were incubated with 100μm micro-beads manufactured with a fluorescent label to aid in recovery and quantification from the <span class="hlt">coral</span> tissue. Following the consumption of plastic, we measured instantaneous rates of calcification as a proxy for physiological performance compared to controls. Our results indicate that <span class="hlt">corals</span> ingest microplastic particles and maintain them internally for at least 24 hours. Our initial findings suggest that the ingestion of ≥ 3 microplastic particles cm-2 may negatively impact rates of <span class="hlt">coral</span> calcification. In light of these preliminary findings, further investigations should examine the long-term effect of environmentally relevant concentrations of microplastics on <span class="hlt">reef</span> <span class="hlt">corals</span> and its potential detriment to <span class="hlt">reef</span> building capacity.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70191050','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70191050"><span>Vulnerability of <span class="hlt">coral</span> <span class="hlt">reefs</span> to bioerosion from land-based sources of pollution</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Prouty, Nancy G.; Anne Cohen,; Yates, Kimberly K.; Storlazzi, Curt; Swarzenski, Peter W.; White, Darla</p> <p>2017-01-01</p> <p>Ocean acidification (OA), the gradual decline in ocean pH and [ ] caused by rising levels of atmospheric CO2, poses a significant threat to <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, depressing rates of calcium carbonate (CaCO3) production, and enhancing rates of bioerosion and dissolution. As ocean pH and [ ] decline globally, there is increasing emphasis on managing local stressors that can exacerbate the vulnerability of <span class="hlt">coral</span> <span class="hlt">reefs</span> to the effects of OA. We show that sustained, nutrient rich, lower pH submarine groundwater discharging onto nearshore <span class="hlt">coral</span> <span class="hlt">reefs</span> off west Maui lowers the pH of seawater and exposes <span class="hlt">corals</span> to nitrate concentrations 50 times higher than ambient. Rates of <span class="hlt">coral</span> calcification are substantially decreased, and rates of bioerosion are orders of magnitude higher than those observed in <span class="hlt">coral</span> cores collected in the Pacific under equivalent low pH conditions but living in oligotrophic waters. Heavier <span class="hlt">coral</span> nitrogen isotope (δ15N) values pinpoint not only site-specific eutrophication, but also a sewage nitrogen source enriched in 15N. Our results show that eutrophication of <span class="hlt">reef</span> seawater by land-based sources of pollution can magnify the effects of OA through nutrient driven-bioerosion. These conditions could contribute to the collapse of coastal <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> sooner than current projections predict based only on ocean acidification.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUFMEP13A0837G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUFMEP13A0837G"><span>Feedbacks Between Wave Energy And Declining <span class="hlt">Coral</span> <span class="hlt">Reef</span> Structure: Implications For Coastal Morphodynamics</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Grady, A. E.; Jenkins, C. J.; Moore, L. J.; Potts, D. C.; Burgess, P. M.; Storlazzi, C. D.; Elias, E.; Reidenbach, M. A.</p> <p>2013-12-01</p> <p>The incident wave energy dissipated by the structural complexity and bottom roughness of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, and the carbonate sediment produced by framework-building <span class="hlt">corals</span>, provide natural shoreline protection and nourishment, respectively. Globally, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are in decline as a result of ocean warming and acidification, which is exacerbated by chronic regional stressors such as pollution and disease. As a consequence of declining <span class="hlt">reef</span> health, many <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are experiencing reduced <span class="hlt">coral</span> cover and shifts to dominance by macroalgae, resulting in a loss of rugosity and thus hydrodynamic roughness. As <span class="hlt">coral</span> <span class="hlt">reef</span> architecture is compromised and carbonate skeletons are eroded, wave energy dissipation and sediment transport patterns--along with the carbonate sediment budget of the coastal environment--may be altered. Using a Delft3D numerical model of the south-central Molokai, Hawaii, fringing <span class="hlt">reef</span>, we simulate the effects of changing <span class="hlt">reef</span> states on wave energy and sediment transport. To determine the temporally-varying effects of biotic and abiotic stressors such as storms and bleaching on the <span class="hlt">reef</span> structure and carbonate production, we couple Delft3D with CarboLOT, a model that simulates growth and competition of carbonate-producing organisms. CarboLOT is driven by the Lotka-Volterra population ecology equations and niche suitability principles, and accesses the CarboKB database for region-specific, carbonate-producing species information on growth rates, reproduction patterns, habitat suitability, as well as organism geometries. Simulations assess how changing <span class="hlt">reef</span> states--which alter carbonate sediment production and <span class="hlt">reef</span> morphology and thus hydrodynamic roughness--impact wave attenuation and sediment transport gradients along <span class="hlt">reef</span>-fronted beaches. Initial results suggest that along fringing <span class="hlt">reefs</span> having characteristics similar to the Molokai fringing <span class="hlt">reef</span>, projected sea level rise will likely outpace <span class="hlt">coral</span> <span class="hlt">reef</span> accretion, and the increased</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25708511','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25708511"><span>Hysteresis in <span class="hlt">coral</span> <span class="hlt">reefs</span> under macroalgal toxicity and overfishing.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bhattacharyya, Joydeb; Pal, Samares</p> <p>2015-03-01</p> <p>Macroalgae and <span class="hlt">corals</span> compete for the available space in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.While herbivorous <span class="hlt">reef</span> fish play a beneficial role in decreasing the growth of macroalgae, macroalgal toxicity and overfishing of herbivores leads to proliferation of macroalgae. The abundance of macroalgae changes the community structure towards a macroalgae-dominated <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. We investigate <span class="hlt">coral</span>-macroalgal phase shifts by means of a continuous time model in a food chain. Conditions for local asymptotic stability of steady states are derived. It is observed that in the presence of macroalgal toxicity and overfishing, the system exhibits hysteresis through saddle-node bifurcation and transcritical bifurcation. We examine the effects of time lags in the liberation of toxins by macroalgae and the recovery of algal turf in response to grazing of herbivores on macroalgae by performing equilibrium and stability analyses of delay-differential forms of the ODE model. Computer simulations have been carried out to illustrate the different analytical results.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUSM.U53A..06M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUSM.U53A..06M"><span>The Paradoxical Roles of Climate Stressors on Disturbance and Recovery of <span class="hlt">Coral</span> <span class="hlt">Reef</span> <span class="hlt">Ecosystems</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Manfrino, C.; Foster, G.; Camp, E.</p> <p>2013-05-01</p> <p>The geographic isolation, absence of significant anthropogenic impacts, compressed spatial scale, and habitat diversity of Little Cayman combine to make it a natural laboratory for elucidating the dualistic impacts of various climatic events. These events both impart <span class="hlt">ecosystem</span> disturbances and aid in the subsequent recovery of <span class="hlt">coral</span> <span class="hlt">reef</span> habitats. Within the isolated microcosm of Little Cayman the environmental factors commonly associated with <span class="hlt">coral</span> stress, mortality, resilience and recovery hinted at by regional-scale observations can be more clearly observed. The primary thrust of this study is to reveal the under-pinning biophysical and hydrologic factors pertinent to <span class="hlt">reef</span> resilience and to better understand the various roles played by climatic disturbances that have led to the rapid recovery of <span class="hlt">corals</span> at Little Cayman following a spate of high temperature anomalies. Six closely-spaced high-temperature events were recorded in the Caribbean between the years of 1987 and 2009. Of these, only the 1998 global ENSO event, with well-documented levels of elevated SST, reduced cloud cover and surface water texture with concomittant increases in UV and irradiance and reduced water velocity, resulted in significant mortality at Little Cayman. Following this event, island-wide live <span class="hlt">coral</span> cover decreased by 40%, from 26% to 14%. Annual monitoring of live <span class="hlt">coral</span> cover following the 1998 ENSO event revealed no significant recovery of live <span class="hlt">coral</span> cover until 2009, at which point there was a rapid rebound to pre-disturbance levels by 2011. Such a protracted step-change in <span class="hlt">coral</span> recovery is indicative of one or more episodic events. The proposed scenario is that the numerous thermal stress events damaged the photo-system of the zooxanthellae, limiting the scope for growth and recovery as the metabolic budgets of <span class="hlt">corals</span> were diverted to cellular repair. It is posited that the rapid cooling effect of frequent Tropical Storms and Hurricanes between 2002 - 2008, coupled with the</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27029403','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27029403"><span>A geological perspective on the degradation and conservation of western Atlantic <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kuffner, Ilsa B; Toth, Lauren T</p> <p>2016-08-01</p> <p>Continuing <span class="hlt">coral-reef</span> degradation in the western Atlantic is resulting in loss of ecological and geologic functions of <span class="hlt">reefs</span>. With the goal of assisting resource managers and stewards of <span class="hlt">reefs</span> in setting and measuring progress toward realistic goals for <span class="hlt">coral-reef</span> conservation and restoration, we examined <span class="hlt">reef</span> degradation in this region from a geological perspective. The importance of <span class="hlt">ecosystem</span> services provided by <span class="hlt">coral</span> <span class="hlt">reefs</span>-as breakwaters that dissipate wave energy and protect shorelines and as providers of habitat for innumerable species-cannot be overstated. However, the few <span class="hlt">coral</span> species responsible for <span class="hlt">reef</span> building in the western Atlantic during the last approximately 1.5 million years are not thriving in the 21st century. These species are highly sensitive to abrupt temperature extremes, prone to disease infection, and have low sexual reproductive potential. Their vulnerability and the low functional redundancy of branching <span class="hlt">corals</span> have led to the low resilience of western Atlantic <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. The decrease in live <span class="hlt">coral</span> cover over the last 50 years highlights the need for study of relict (senescent) <span class="hlt">reefs</span>, which, from the perspective of coastline protection and habitat structure, may be just as important to conserve as the living <span class="hlt">coral</span> veneer. Research is needed to characterize the geological processes of bioerosion, <span class="hlt">reef</span> cementation, and sediment transport as they relate to modern-day changes in <span class="hlt">reef</span> elevation. For example, although parrotfish remove nuisance macroalgae, possibly promoting <span class="hlt">coral</span> recruitment, they will not save Atlantic <span class="hlt">reefs</span> from geological degradation. In fact, these fish are quickly nibbling away significant quantities of Holocene <span class="hlt">reef</span> framework. The question of how different biota covering dead <span class="hlt">reefs</span> affect framework resistance to biological and physical erosion needs to be addressed. Monitoring and managing <span class="hlt">reefs</span> with respect to physical resilience, in addition to ecological resilience, could optimize the expenditure of resources</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26991947','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26991947"><span>Expanding marine protected areas to include degraded <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Abelson, A; Nelson, P A; Edgar, G J; Shashar, N; Reed, D C; Belmaker, J; Krause, G; Beck, M W; Brokovich, E; France, R; Gaines, S D</p> <p>2016-12-01</p> <p>Marine protected areas (MPAs) are a commonly applied solution to <span class="hlt">coral</span> <span class="hlt">reef</span> degradation, yet <span class="hlt">coral</span> <span class="hlt">reefs</span> continue to decline worldwide. We argue that expanding the range of MPAs to include degraded <span class="hlt">reefs</span> (DR-MPA) could help reverse this trend. This approach requires new ecological criteria for MPA design, siting, and management. Rather than focusing solely on preserving healthy <span class="hlt">reefs</span>, our approach focuses on the potential for biodiversity recovery and renewal of <span class="hlt">ecosystem</span> services. The new criteria would help identify sites with the highest potential for recovery and the greatest resistance to future threats (e.g., increased temperature and acidification) and sites that contribute to MPA connectivity. The DR-MPA approach is a compliment rather than a substitute for traditional MPA design approaches. We believe that the DR-MPA approach can enhance the natural, or restoration-assisted, recovery of DRs and their <span class="hlt">ecosystem</span> services; increase total <span class="hlt">reef</span> area available for protection; promote more resilient and better-connected MPA networks; and improve conditions for human communities dependent on MPA <span class="hlt">ecosystem</span> services. © 2016 The Authors. Conservation Biology published by Wiley Periodicals, Inc. on behalf of Society for Conservation Biology.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2003AGUFM.B32D..08P','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2003AGUFM.B32D..08P"><span>Subterranean Groundwater Nutrient Input to Coastal Oceans and <span class="hlt">Coral</span> <span class="hlt">Reef</span> Sustainability</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Paytan, A.; Street, J. H.</p> <p>2003-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are often referred to as the tropical rain forests of the oceans because of their high productivity and biodiversity. Recent observations in <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide have shown clear degradation in water quality and <span class="hlt">coral</span> <span class="hlt">reef</span> health and diversity. The implications of this are severe, including tremendous economic losses mostly though fishing and tourism. Nutrient loading has been implicated as one possible cause for the <span class="hlt">ecosystem</span> decline. A previously unappreciated potential source of nutrient loading is submarine ground water discharge (SGW). Ground water in many cases has high nutrient content from sewage pollution and fertilizer application for agriculture and landscaping. To better understand the effect of this potential source of nutrient input and degrading water quality, we are exploring the contribution of SGW to the nutrient levels in <span class="hlt">coral</span> <span class="hlt">reefs</span>. A key to this approach is determining the amount and source of SGW that flows into the coast as well as its nutrient concentrations. The SGW flux and associated input of chemical dissolved load (nutrient, DOC, trace elements and other contaminants) is quantified using naturally occurring Ra isotopes. Radium isotopes have been shown to be excellent tracers for SGW inputs into estuaries and coastal areas (Moore, 1996; Hussain et al., 1999; Kerst et al., 2000). Measurements of Ra activity within the <span class="hlt">coral</span> <span class="hlt">reef</span>, the lagoons and the open waters adjacent to the <span class="hlt">reef</span> provide valuable information regarding the input of Ra as well as nutrients and possibly pollutant from groundwater discharge. Through this analysis the effect of SGD on the delicate carbon and nutrient balance of the fragile <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> could be evaluated. In addition to quantifying the contribution of freshwater to the nutrient mass balance in the <span class="hlt">reef</span>, information regarding the length of time a water parcel has remained in the near-shore region over the <span class="hlt">reef</span> can be estimated using the Ra isotope quartet.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_8");'>8</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li class="active"><span>10</span></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_10 --> <div id="page_11" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li class="active"><span>11</span></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="201"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5310828','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5310828"><span>Deep <span class="hlt">reefs</span> are not universal refuges: Reseeding potential varies among <span class="hlt">coral</span> species</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Bongaerts, Pim; Riginos, Cynthia; Brunner, Ramona; Englebert, Norbert; Smith, Struan R.; Hoegh-Guldberg, Ove</p> <p>2017-01-01</p> <p>Deep <span class="hlt">coral</span> <span class="hlt">reefs</span> (that is, mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span>) can act as refuges against major disturbances affecting shallow <span class="hlt">reefs</span>. It has been proposed that, through the provision of <span class="hlt">coral</span> propagules, such deep refuges may aid in shallow <span class="hlt">reef</span> recovery; however, this “reseeding” hypothesis remains largely untested. We conducted a genome-wide assessment of two scleractinian <span class="hlt">coral</span> species with contrasting reproductive modes, to assess the potential for connectivity between mesophotic (40 m) and shallow (12 m) depths on an isolated <span class="hlt">reef</span> system in the Western Atlantic (Bermuda). To overcome the pervasive issue of endosymbiont contamination associated with de novo sequencing of <span class="hlt">corals</span>, we used a novel subtraction reference approach. We have demonstrated that strong depth-associated selection has led to genome-wide divergence in the brooding species Agaricia fragilis (with divergence by depth exceeding divergence by location). Despite introgression from shallow into deep populations, a lack of first-generation migrants indicates that effective connectivity over ecological time scales is extremely limited for this species and thus precludes reseeding of shallow <span class="hlt">reefs</span> from deep refuges. In contrast, no genetic structuring between depths (or locations) was observed for the broadcasting species Stephanocoenia intersepta, indicating substantial potential for vertical connectivity. Our findings demonstrate that vertical connectivity within the same <span class="hlt">reef</span> system can differ greatly between species and that the reseeding potential of deep <span class="hlt">reefs</span> in Bermuda may apply to only a small number of scleractinian species. Overall, we argue that the “deep <span class="hlt">reef</span> refuge hypothesis” holds for individual <span class="hlt">coral</span> species during episodic disturbances but should not be assumed as a broader <span class="hlt">ecosystem</span>-wide phenomenon. PMID:28246645</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4063469','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4063469"><span>Benthic N2 fixation in <span class="hlt">coral</span> <span class="hlt">reefs</span> and the potential effects of human-induced environmental change</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Cardini, Ulisse; Bednarz, Vanessa N; Foster, Rachel A; Wild, Christian</p> <p>2014-01-01</p> <p>Tropical <span class="hlt">coral</span> <span class="hlt">reefs</span> are among the most productive and diverse <span class="hlt">ecosystems</span>, despite being surrounded by ocean waters where nutrients are in short supply. Benthic dinitrogen (N2) fixation is a significant internal source of “new” nitrogen (N) in <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, but related information appears to be sparse. Here, we review the current state (and gaps) of knowledge on N2 fixation associated with <span class="hlt">coral</span> <span class="hlt">reef</span> organisms and their <span class="hlt">ecosystems</span>. By summarizing the existing literature, we show that benthic N2 fixation is an omnipresent process in tropical <span class="hlt">reef</span> environments. Highest N2 fixation rates are detected in <span class="hlt">reef</span>-associated cyanobacterial mats and sea grass meadows, clearly showing the significance of these functional groups, if present, to the input of new N in <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Nonetheless, key benthic organisms such as hard <span class="hlt">corals</span> also importantly contribute to benthic N2 fixation in the <span class="hlt">reef</span>. Given the usually high <span class="hlt">coral</span> coverage of healthy <span class="hlt">reef</span> systems, these results indicate that benthic symbiotic associations may be more important than previously thought. In fact, mutualisms between carbon (C) and N2 fixers have likely evolved that may enable <span class="hlt">reef</span> communities to mitigate N limitation. We then explore the potential effects of the increasing human interferences on the process of benthic <span class="hlt">reef</span> N2 fixation via changes in diazotrophic populations, enzymatic activities, or availability of benthic substrates favorable to these microorganisms. Current knowledge indicates positive effects of ocean acidification, warming, and deoxygenation and negative effects of increased ultraviolet radiation on the amount of N fixed in <span class="hlt">coral</span> <span class="hlt">reefs</span>. Eutrophication may either boost or suppress N2 fixation, depending on the nutrient becoming limiting. As N2 fixation appears to play a fundamental role in nutrient-limited <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, these assumptions need to be expanded and confirmed by future research efforts addressing the knowledge gaps identified in this review. PMID:24967086</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=308191&keyword=stress+AND+management&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=308191&keyword=stress+AND+management&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Developing a Biological Condition Gradient for the Protection of Puerto Rico's <span class="hlt">Coral</span> <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>We introduce the application of the Biological Condition Gradient (BCG) to <span class="hlt">coral</span> <span class="hlt">reefs</span>: a conceptual model that describes how biological attributes of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> might change along a gradient of increasing anthropogenic stress. Under authority of the Clean Water Act, t...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24820734','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24820734"><span>Consequences of a government-controlled agricultural price increase on fishing and the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> in the republic of kiribati.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Reddy, Sheila M W; Groves, Theodore; Nagavarapu, Sriniketh</p> <p>2014-01-01</p> <p>Economic development policies may have important economic and ecological consequences beyond the sector they target. Understanding these consequences is important to improving these policies and finding opportunities to align economic development with natural resource conservation. These issues are of particular interest to governments and non-governmental organizations that have new mandates to pursue multiple benefits. In this case study, we examined the direct and indirect economic and ecological effects of an increase in the government-controlled price for the primary agricultural product in the Republic of Kiribati, Central Pacific. We conducted household surveys and underwater visual surveys of the <span class="hlt">coral</span> <span class="hlt">reef</span> to examine how the government increase in the price of copra directly affected copra labor and indirectly affected fishing and the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. The islands of Kiribati are <span class="hlt">coral</span> <span class="hlt">reef</span> atolls and the majority of households participate in copra agriculture and fishing on the <span class="hlt">coral</span> <span class="hlt">reefs</span>. Our household survey data suggest that the 30% increase in the price of copra resulted in a 32% increase in copra labor and a 38% increase in fishing labor. Households with the largest amount of land in coconut production increased copra labor the most and households with the smallest amount of land in coconut production increased fishing the most. Our ecological data suggests that increased fishing labor may result in a 20% decrease in fish stocks and 4% decrease in <span class="hlt">coral</span> <span class="hlt">reef</span>-builders. We provide empirical evidence to suggest that the government increase in the copra price in Kiribati had unexpected and indirect economic and ecological consequences. In this case, the economic development policy was not in alignment with conservation. These results emphasize the importance of accounting for differences in household capital and taking a systems approach to policy design and evaluation, as advocated by sustainable livelihood and <span class="hlt">ecosystem</span>-based management frameworks.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4018407','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4018407"><span>Consequences of a Government-Controlled Agricultural Price Increase on Fishing and the <span class="hlt">Coral</span> <span class="hlt">Reef</span> <span class="hlt">Ecosystem</span> in the Republic of Kiribati</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Reddy, Sheila M. W.; Groves, Theodore; Nagavarapu, Sriniketh</p> <p>2014-01-01</p> <p>Background Economic development policies may have important economic and ecological consequences beyond the sector they target. Understanding these consequences is important to improving these policies and finding opportunities to align economic development with natural resource conservation. These issues are of particular interest to governments and non-governmental organizations that have new mandates to pursue multiple benefits. In this case study, we examined the direct and indirect economic and ecological effects of an increase in the government-controlled price for the primary agricultural product in the Republic of Kiribati, Central Pacific. Methods/Principal Findings We conducted household surveys and underwater visual surveys of the <span class="hlt">coral</span> <span class="hlt">reef</span> to examine how the government increase in the price of copra directly affected copra labor and indirectly affected fishing and the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. The islands of Kiribati are <span class="hlt">coral</span> <span class="hlt">reef</span> atolls and the majority of households participate in copra agriculture and fishing on the <span class="hlt">coral</span> <span class="hlt">reefs</span>. Our household survey data suggest that the 30% increase in the price of copra resulted in a 32% increase in copra labor and a 38% increase in fishing labor. Households with the largest amount of land in coconut production increased copra labor the most and households with the smallest amount of land in coconut production increased fishing the most. Our ecological data suggests that increased fishing labor may result in a 20% decrease in fish stocks and 4% decrease in <span class="hlt">coral</span> <span class="hlt">reef</span>-builders. Conclusions/Significance We provide empirical evidence to suggest that the government increase in the copra price in Kiribati had unexpected and indirect economic and ecological consequences. In this case, the economic development policy was not in alignment with conservation. These results emphasize the importance of accounting for differences in household capital and taking a systems approach to policy design and evaluation, as advocated by</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMGC52D..05T','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMGC52D..05T"><span>Variability in <span class="hlt">reef</span> connectivity in the <span class="hlt">Coral</span> Triangle</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Thompson, D. M.; Kleypas, J. A.; Castruccio, F. S.; Watson, J. R.; Curchitser, E. N.</p> <p>2015-12-01</p> <p>The <span class="hlt">Coral</span> Triangle (CT) is not only the global center of marine biodiversity, it also supports the livelihoods of millions of people. Unfortunately, it is also considered the most threatened of all <span class="hlt">reef</span> regions, with rising temperature and <span class="hlt">coral</span> bleaching already taking a toll. Reproductive connectivity between <span class="hlt">reefs</span> plays a critical role in the <span class="hlt">reef</span>'s capacity to recover after such disturbances. Thus, oceanographic modeling efforts to understand patterns of <span class="hlt">reef</span> connectivity are essential to the effective design of a network of Marine Protected Areas (MPAs) to conserve marine <span class="hlt">ecosystems</span> in the <span class="hlt">Coral</span> Triangle. Here, we combine a Regional Ocean Modeling System developed for the <span class="hlt">Coral</span> Triangle (CT-ROMS) with a Lagrangian particle tracking tool (TRACMASS) to investigate the probability of <span class="hlt">coral</span> larval transport between <span class="hlt">reefs</span>. A 47-year hindcast simulation (1960-2006) was used to investigate the variability in larval transport of a broadcasting <span class="hlt">coral</span> following mass spawning events in April and September. Potential connectivity between <span class="hlt">reefs</span> was highly variable and stochastic from year to year, emphasizing the importance of decadal or longer simulations in identifying connectivity patterns, key source and sink regions, and thus marine management targets for MPAs. The influence of temperature on realized connectivity (future work) may add further uncertainty to year-to-year patterns of connectivity between <span class="hlt">reefs</span>. Nonetheless, the potential connectivity results we present here suggest that although <span class="hlt">reefs</span> in this region are primarily self-seeded, rare long-distance dispersal may promote recovery and genetic exchange between <span class="hlt">reefs</span> in the region. The spatial pattern of "subpopulations" based solely on the physical drivers of connectivity between <span class="hlt">reefs</span> closely match regional patterns of biodiversity, suggesting that physical barriers to larval dispersal may be a key driver of <span class="hlt">reef</span> biodiversity. Finally, 21st Century simulations driven by the Community Earth System Model (CESM</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4647610','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4647610"><span>Can we measure beauty? Computational evaluation of <span class="hlt">coral</span> <span class="hlt">reef</span> aesthetics</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Guibert, Marine; Foerschner, Anja; Co, Tim; Calhoun, Sandi; George, Emma; Hatay, Mark; Dinsdale, Elizabeth; Sandin, Stuart A.; Smith, Jennifer E.; Vermeij, Mark J.A.; Felts, Ben; Dustan, Phillip; Salamon, Peter; Rohwer, Forest</p> <p>2015-01-01</p> <p>The natural beauty of <span class="hlt">coral</span> <span class="hlt">reefs</span> attracts millions of tourists worldwide resulting in substantial revenues for the adjoining economies. Although their visual appearance is a pivotal factor attracting humans to <span class="hlt">coral</span> <span class="hlt">reefs</span> current monitoring protocols exclusively target biogeochemical parameters, neglecting changes in their aesthetic appearance. Here we introduce a standardized computational approach to assess <span class="hlt">coral</span> <span class="hlt">reef</span> environments based on 109 visual features designed to evaluate the aesthetic appearance of art. The main feature groups include color intensity and diversity of the image, relative size, color, and distribution of discernable objects within the image, and texture. Specific <span class="hlt">coral</span> <span class="hlt">reef</span> aesthetic values combining all 109 features were calibrated against an established biogeochemical assessment (NCEAS) using machine learning algorithms. These values were generated for ∼2,100 random photographic images collected from 9 <span class="hlt">coral</span> <span class="hlt">reef</span> locations exposed to varying levels of anthropogenic influence across 2 ocean systems. Aesthetic values proved accurate predictors of the NCEAS scores (root mean square error < 5 for N ≥ 3) and significantly correlated to microbial abundance at each site. This shows that mathematical approaches designed to assess the aesthetic appearance of photographic images can be used as an inexpensive monitoring tool for <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. It further suggests that human perception of aesthetics is not purely subjective but influenced by inherent reactions towards measurable visual cues. By quantifying aesthetic features of <span class="hlt">coral</span> <span class="hlt">reef</span> systems this method provides a cost efficient monitoring tool that targets one of the most important socioeconomic values of <span class="hlt">coral</span> <span class="hlt">reefs</span> directly tied to revenue for its local population. PMID:26587350</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2008PhDT........88S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2008PhDT........88S"><span>Effects of changing temperatures on <span class="hlt">coral</span> <span class="hlt">reef</span> health: Implications for management</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Selig, Elizabeth Rose</p> <p></p> <p>Human-induced climate change has already led to substantial changes in a variety of <span class="hlt">ecosystems</span>. <span class="hlt">Coral</span> <span class="hlt">reefs</span> are particularly vulnerable to rises in ocean temperature as a result of climate change because they already live near their thermal limits. However, we know little about the spatial patterns of temperature anomalies, areas of greater than usual temperature, which cause <span class="hlt">coral</span> mortality and increased rates of <span class="hlt">coral</span> disease. These gaps in knowledge make it difficult to design effective management strategies for mitigating the effects of ocean warming. My dissertation research uses a combination of a new satellite ocean temperature dataset, field surveys on <span class="hlt">coral</span> health, and data on marine protected area (MPA) boundaries to analyze how ocean temperatures are affecting <span class="hlt">coral</span> <span class="hlt">reef</span> health at regional and global scales. I discovered that temperature anomalies are spatially and temporally variable from 1985-2005 even during El Nino events. They are also typically less than 50 km2, smaller than the resolution of many climate models. In addition, I found a strong relationship on the Great Barrier <span class="hlt">Reef</span> between the number of temperature anomalies and the number of cases of white syndrome, a prevalent <span class="hlt">coral</span> disease. Results from this study suggest that temperature anomalies are playing a major role in the observed decline of <span class="hlt">coral</span> <span class="hlt">reefs</span> over the last 30-40 years. This decline highlights the importance of determining whether MPAs, one of the most common management tools are effective in restoring <span class="hlt">coral</span> cover. My analyses demonstrated that MPAs can confer some <span class="hlt">ecosystem</span> resilience through fisheries management and land management practices at regional scales. <span class="hlt">Coral</span> cover on <span class="hlt">reefs</span> inside of MPAs did not change over time, while unprotected <span class="hlt">reefs</span> experienced declines in <span class="hlt">coral</span> cover. However, MPAs do not moderate the effect of thermal stress on <span class="hlt">corals</span> or reduce <span class="hlt">coral</span> decline at rates that can offset losses from thermal stress and other major natural and human-caused disturbances</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28320966','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28320966"><span>Tropical dead zones and mass mortalities on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Altieri, Andrew H; Harrison, Seamus B; Seemann, Janina; Collin, Rachel; Diaz, Robert J; Knowlton, Nancy</p> <p>2017-04-04</p> <p>Degradation of coastal water quality in the form of low dissolved oxygen levels (hypoxia) can harm biodiversity, <span class="hlt">ecosystem</span> function, and human wellbeing. Extreme hypoxic conditions along the coast, leading to what are often referred to as "dead zones," are known primarily from temperate regions. However, little is known about the potential threat of hypoxia in the tropics, even though the known risk factors, including eutrophication and elevated temperatures, are common. Here we document an unprecedented hypoxic event on the Caribbean coast of Panama and assess the risk of dead zones to <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide. The event caused <span class="hlt">coral</span> bleaching and massive mortality of <span class="hlt">corals</span> and other <span class="hlt">reef</span>-associated organisms, but observed shifts in community structure combined with laboratory experiments revealed that not all <span class="hlt">coral</span> species are equally sensitive to hypoxia. Analyses of global databases showed that <span class="hlt">coral</span> <span class="hlt">reefs</span> are associated with more than half of the known tropical dead zones worldwide, with >10% of all <span class="hlt">coral</span> <span class="hlt">reefs</span> at elevated risk for hypoxia based on local and global risk factors. Hypoxic events in the tropics and associated mortality events have likely been underreported, perhaps by an order of magnitude, because of the lack of local scientific capacity for their detection. Monitoring and management plans for <span class="hlt">coral</span> <span class="hlt">reef</span> resilience should incorporate the growing threat of coastal hypoxia and include support for increased detection and research capacity.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5389270','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5389270"><span>Tropical dead zones and mass mortalities on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Altieri, Andrew H.; Harrison, Seamus B.; Seemann, Janina; Collin, Rachel; Diaz, Robert J.; Knowlton, Nancy</p> <p>2017-01-01</p> <p>Degradation of coastal water quality in the form of low dissolved oxygen levels (hypoxia) can harm biodiversity, <span class="hlt">ecosystem</span> function, and human wellbeing. Extreme hypoxic conditions along the coast, leading to what are often referred to as “dead zones,” are known primarily from temperate regions. However, little is known about the potential threat of hypoxia in the tropics, even though the known risk factors, including eutrophication and elevated temperatures, are common. Here we document an unprecedented hypoxic event on the Caribbean coast of Panama and assess the risk of dead zones to <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide. The event caused <span class="hlt">coral</span> bleaching and massive mortality of <span class="hlt">corals</span> and other <span class="hlt">reef</span>-associated organisms, but observed shifts in community structure combined with laboratory experiments revealed that not all <span class="hlt">coral</span> species are equally sensitive to hypoxia. Analyses of global databases showed that <span class="hlt">coral</span> <span class="hlt">reefs</span> are associated with more than half of the known tropical dead zones worldwide, with >10% of all <span class="hlt">coral</span> <span class="hlt">reefs</span> at elevated risk for hypoxia based on local and global risk factors. Hypoxic events in the tropics and associated mortality events have likely been underreported, perhaps by an order of magnitude, because of the lack of local scientific capacity for their detection. Monitoring and management plans for <span class="hlt">coral</span> <span class="hlt">reef</span> resilience should incorporate the growing threat of coastal hypoxia and include support for increased detection and research capacity. PMID:28320966</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/18079392','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/18079392"><span><span class="hlt">Coral</span> <span class="hlt">reefs</span> under rapid climate change and ocean acidification.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hoegh-Guldberg, O; Mumby, P J; Hooten, A J; Steneck, R S; Greenfield, P; Gomez, E; Harvell, C D; Sale, P F; Edwards, A J; Caldeira, K; Knowlton, N; Eakin, C M; Iglesias-Prieto, R; Muthiga, N; Bradbury, R H; Dubi, A; Hatziolos, M E</p> <p>2007-12-14</p> <p>Atmospheric carbon dioxide concentration is expected to exceed 500 parts per million and global temperatures to rise by at least 2 degrees C by 2050 to 2100, values that significantly exceed those of at least the past 420,000 years during which most extant marine organisms evolved. Under conditions expected in the 21st century, global warming and ocean acidification will compromise carbonate accretion, with <span class="hlt">corals</span> becoming increasingly rare on <span class="hlt">reef</span> systems. The result will be less diverse <span class="hlt">reef</span> communities and carbonate <span class="hlt">reef</span> structures that fail to be maintained. Climate change also exacerbates local stresses from declining water quality and overexploitation of key species, driving <span class="hlt">reefs</span> increasingly toward the tipping point for functional collapse. This review presents future scenarios for <span class="hlt">coral</span> <span class="hlt">reefs</span> that predict increasingly serious consequences for <span class="hlt">reef</span>-associated fisheries, tourism, coastal protection, and people. As the International Year of the <span class="hlt">Reef</span> 2008 begins, scaled-up management intervention and decisive action on global emissions are required if the loss of <span class="hlt">coral</span>-dominated <span class="hlt">ecosystems</span> is to be avoided.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSEC24C1132H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSEC24C1132H"><span>Wave Dissipation on Low- to Super-Energy <span class="hlt">Coral</span> <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Harris, D. L.</p> <p>2016-02-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are valuable, complex and bio-diverse <span class="hlt">ecosystems</span> and are also known to be one of the most effective barriers to swell events in coastal environments. Previous research has found <span class="hlt">coral</span> <span class="hlt">reefs</span> to be remarkably efficient in removing most of the wave energy during the initial breaking and transformation on the <span class="hlt">reef</span> flats. The rate of dissipation is so rapid that <span class="hlt">coral</span> <span class="hlt">reefs</span> have been referred to as rougher than any known coastal barrier. The dissipation of wave energy across <span class="hlt">reef</span> flats is crucial in maintaining the relatively low-energy conditions in the back <span class="hlt">reef</span> and lagoonal environments providing vital protection to adjacent beach or coastal regions from cyclone and storm events. A shift in the regulation of wave energy by <span class="hlt">reef</span> flats could have catastrophic consequences ecologically, socially, and economically. This study examined the dissipation of wave energy during two swell events in Tahiti and Moorea, French Polyesia. Field sites were chosen in varying degrees of exposure and geomorphology from low-energy protected sites (Tiahura, Moorea) to super-energy sites (Teahupo'o, Tahiti). Waves were measured during two moderate to large swell events in cross <span class="hlt">reef</span> transects using short-term high-resolution pressure transducers. Wave conditions were found to be similar in all back <span class="hlt">reef</span> locations despite the very different wave exposure at each <span class="hlt">reef</span> site. However, wave conditions on the <span class="hlt">reef</span> flats were different and mirrored the variation in wave exposure with depth over the <span class="hlt">reef</span> flat the primary regulator of <span class="hlt">reef</span> flat wave height. These results indicate that <span class="hlt">coral</span> <span class="hlt">reef</span> flats evolve morphodynamically with the wave climate, which creates <span class="hlt">coral</span> <span class="hlt">reef</span> geomorphologies capable of dissipating wave energy that results in similar back <span class="hlt">reef</span> wave conditions regardless of the offshore wave climate.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2010GeoRL..3715602W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2010GeoRL..3715602W"><span>Response of <span class="hlt">coral</span> <span class="hlt">reefs</span> to climate change: Expansion and demise of the southernmost Pacific <span class="hlt">coral</span> <span class="hlt">reef</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Woodroffe, Colin D.; Brooke, Brendan P.; Linklater, Michelle; Kennedy, David M.; Jones, Brian G.; Buchanan, Cameron; Mleczko, Richard; Hua, Quan; Zhao, Jian-xin</p> <p>2010-08-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> track sea level and are particularly sensitive to changes in climate. <span class="hlt">Reefs</span> are threatened by global warming, with many experiencing increased <span class="hlt">coral</span> bleaching. Warmer sea surface temperatures might enable <span class="hlt">reef</span> expansion into mid latitudes. Here we report multibeam sonar and coring that reveal an extensive relict <span class="hlt">coral</span> <span class="hlt">reef</span> around Lord Howe Island, which is fringed by the southernmost <span class="hlt">reef</span> in the Pacific Ocean. The relict <span class="hlt">reef</span>, in water depths of 25-50 m, flourished in early Holocene and covered an area more than 20 times larger than the modern <span class="hlt">reef</span>. Radiocarbon and uranium-series dating indicates that <span class="hlt">corals</span> grew between 9000 and 7000 years ago. The <span class="hlt">reef</span> was subsequently drowned, and backstepped to its modern limited extent. This relict <span class="hlt">reef</span>, with localised re-establishment of <span class="hlt">corals</span> in the past three millennia, could become a substrate for <span class="hlt">reef</span> expansion in response to warmer temperatures, anticipated later this century and beyond, if <span class="hlt">corals</span> are able to recolonise its surface.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26606792','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26606792"><span>[<span class="hlt">Coral</span> <span class="hlt">reefs</span> in the face of ecological threats of XXI century].</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Tkachenko, K S</p> <p>2015-01-01</p> <p>To date, more than a quarter of tropical <span class="hlt">coral</span> <span class="hlt">reefs</span> of the World Ocean are believed to be totally de- stroyed. Given the present rates of <span class="hlt">reefs</span> degradation, this value may be doubled in the nearest 30 years. For the essential part of coastal community, the destruction of <span class="hlt">coral</span> <span class="hlt">ecosystems</span> implies the loss of the major food sources, natural protection from storms, and significant (if not the only) revenue from exploi- tation of <span class="hlt">reefs</span> especially in tourism industry. Finally, the disappearance of low-laying <span class="hlt">coral</span> islands may threat the local communities by deprivation of living space. Global negative effects include temperature anomalies of sea surface waters and an increase of atmospheric CO2 concentration leading to ocean acidification. Local negative effects are related to in- crease of sedimentation and eutrophication, cyclone and storm passes, <span class="hlt">coral</span> diseases, chemical pollution, mechanical destruction of <span class="hlt">corals</span> by humans, anthropogenic depletion of functional groups of fish and invertebrates. An entire set of responses of <span class="hlt">coral</span> <span class="hlt">ecosystems</span> to stressful factors on the levels of both separate taxa and <span class="hlt">ecosystem</span> is discussed. An analysis of published data suggests that with high probability the tropical <span class="hlt">coral</span> communities will come to collapse stage by the middle of the current century at more than 50% of the area of their biogeographic range, especially in the regions of dense human population. At the most optimistic scenario, complex effect of reviewed negative factors will result in <span class="hlt">coral</span> <span class="hlt">ecosystems</span> main- taining in some areas. However, after global transformations, these <span class="hlt">ecosystems</span> will be dominated by the most resistant taxa, mainly massive and encrusting forms of long-lived species with low growth rates and high competitive ability. Among such taxa, Poritidae demonstrates the highest adaptive capability. At the most pessimistic scenario, scleractinian communities will be replaced by alternative communities of macroalgae and non-calcareous anthozoans.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.usgs.gov/fs/2009/3094/','USGSPUBS'); return false;" href="https://pubs.usgs.gov/fs/2009/3094/"><span>Gulf of Mexico Deep-Sea <span class="hlt">Coral</span> <span class="hlt">Ecosystem</span> Studies, 2008-2011</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Kellogg, Christina A.</p> <p>2009-01-01</p> <p>Most people are familiar with tropical <span class="hlt">coral</span> <span class="hlt">reefs</span>, located in warm, well-illuminated, shallow waters. However, <span class="hlt">corals</span> also exist hundreds and even thousands of meters below the ocean surface, where it is cold and completely dark. These deep-sea <span class="hlt">corals</span>, also known as cold-water <span class="hlt">corals</span>, have become a topic of interest due to conservation concerns over the impacts of trawling, exploration for oil and gas, and climate change. Although the existence of these <span class="hlt">corals</span> has been known since the 1800s, our understanding of their distribution, ecology, and biology is limited due to the technical difficulties of conducting deep-sea research. DISCOVRE (DIversity, Systematics, and COnnectivity of Vulnerable <span class="hlt">Reef</span> <span class="hlt">Ecosystems</span>) is a new U.S. Geological Survey (USGS) program focused on deep-water <span class="hlt">coral</span> <span class="hlt">ecosystems</span> in the Gulf of Mexico. This integrated, multidisciplinary, international effort investigates a variety of topics related to unique and fragile deep-sea <span class="hlt">coral</span> <span class="hlt">ecosystems</span> from the microscopic level to the <span class="hlt">ecosystem</span> level, including components of microbiology, population genetics, paleoecology, food webs, taxonomy, community ecology, physical oceanography, and mapping.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5760028','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5760028"><span>Taking the metabolic pulse of the world’s <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Andersson, Andreas J.; Langdon, Chris; Albright, Rebecca; Bates, Nicholas R.; Caldeira, Ken; Carlton, Renee; Corredor, Jorge E.; Dunbar, Rob B.; Enochs, Ian; Erez, Jonathan; Eyre, Bradley D.; Gattuso, Jean-Pierre; Gledhill, Dwight; Kayanne, Hajime; Kline, David I.; Koweek, David A.; Lantz, Coulson; Lazar, Boaz; Manzello, Derek; McMahon, Ashly; Meléndez, Melissa; Page, Heather N.; Santos, Isaac R.; Schulz, Kai G.; Shaw, Emily; Silverman, Jacob; Suzuki, Atsushi; Teneva, Lida; Watanabe, Atsushi; Yamamoto, Shoji</p> <p>2018-01-01</p> <p>Worldwide, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are experiencing increasing pressure from a variety of anthropogenic perturbations including ocean warming and acidification, increased sedimentation, eutrophication, and overfishing, which could shift <span class="hlt">reefs</span> to a condition of net calcium carbonate (CaCO3) dissolution and erosion. Herein, we determine the net calcification potential and the relative balance of net organic carbon metabolism (net community production; NCP) and net inorganic carbon metabolism (net community calcification; NCC) within 23 <span class="hlt">coral</span> <span class="hlt">reef</span> locations across the globe. In light of these results, we consider the suitability of using these two metrics developed from total alkalinity (TA) and dissolved inorganic carbon (DIC) measurements collected on different spatiotemporal scales to monitor <span class="hlt">coral</span> <span class="hlt">reef</span> biogeochemistry under anthropogenic change. All <span class="hlt">reefs</span> in this study were net calcifying for the majority of observations as inferred from alkalinity depletion relative to offshore, although occasional observations of net dissolution occurred at most locations. However, <span class="hlt">reefs</span> with lower net calcification potential (i.e., lower TA depletion) could shift towards net dissolution sooner than <span class="hlt">reefs</span> with a higher potential. The percent influence of organic carbon fluxes on total changes in dissolved inorganic carbon (DIC) (i.e., NCP compared to the sum of NCP and NCC) ranged from 32% to 88% and reflected inherent biogeochemical differences between <span class="hlt">reefs</span>. <span class="hlt">Reefs</span> with the largest relative percentage of NCP experienced the largest variability in seawater pH for a given change in DIC, which is directly related to the <span class="hlt">reefs</span> ability to elevate or suppress local pH relative to the open ocean. This work highlights the value of measuring <span class="hlt">coral</span> <span class="hlt">reef</span> carbonate chemistry when evaluating their susceptibility to ongoing global environmental change and offers a baseline from which to guide future conservation efforts aimed at preserving these valuable <span class="hlt">ecosystems</span>. PMID:29315312</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19211057','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19211057"><span>Linking social and ecological systems to sustain <span class="hlt">coral</span> <span class="hlt">reef</span> fisheries.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cinner, Joshua E; McClanahan, Timothy R; Daw, Tim M; Graham, Nicholas A J; Maina, Joseph; Wilson, Shaun K; Hughes, Terence P</p> <p>2009-02-10</p> <p>The <span class="hlt">ecosystem</span> goods and services provided by <span class="hlt">coral</span> <span class="hlt">reefs</span> are critical to the social and economic welfare of hundreds of millions of people, overwhelmingly in developing countries [1]. Widespread <span class="hlt">reef</span> degradation is severely eroding these goods and services, but the socioeconomic factors shaping the ways that societies use <span class="hlt">coral</span> <span class="hlt">reefs</span> are poorly understood [2]. We examine relationships between human population density, a multidimensional index of socioeconomic development, <span class="hlt">reef</span> complexity, and the condition of <span class="hlt">coral</span> <span class="hlt">reef</span> fish populations in five countries across the Indian Ocean. In fished sites, fish biomass was negatively related to human population density, but it was best explained by <span class="hlt">reef</span> complexity and a U-shaped relationship with socioeconomic development. The biomass of <span class="hlt">reef</span> fishes was four times lower at locations with intermediate levels of economic development than at locations with both low and high development. In contrast, average biomass inside fishery closures was three times higher than in fished sites and was not associated with socioeconomic development. Sustaining <span class="hlt">coral</span> <span class="hlt">reef</span> fisheries requires an integrated approach that uses tools such as protected areas to quickly build <span class="hlt">reef</span> resources while also building capacities and capital in societies over longer time frames to address the complex underlying causes of <span class="hlt">reef</span> degradation.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35..459F','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35..459F"><span>Reassessing the trophic role of <span class="hlt">reef</span> sharks as apex predators on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Frisch, Ashley J.; Ireland, Matthew; Rizzari, Justin R.; Lönnstedt, Oona M.; Magnenat, Katalin A.; Mirbach, Christopher E.; Hobbs, Jean-Paul A.</p> <p>2016-06-01</p> <p>Apex predators often have strong top-down effects on <span class="hlt">ecosystem</span> components and are therefore a priority for conservation and management. Due to their large size and conspicuous predatory behaviour, <span class="hlt">reef</span> sharks are typically assumed to be apex predators, but their functional role is yet to be confirmed. In this study, we used stomach contents and stable isotopes to estimate diet, trophic position and carbon sources for three common species of <span class="hlt">reef</span> shark ( Triaenodon obesus, Carcharhinus melanopterus and C. amblyrhynchos) from the Great Barrier <span class="hlt">Reef</span> (Australia) and evaluated their assumed functional role as apex predators by qualitative and quantitative comparisons with other sharks and large predatory fishes. We found that <span class="hlt">reef</span> sharks do not occupy the apex of <span class="hlt">coral</span> <span class="hlt">reef</span> food chains, but instead have functional roles similar to those of large predatory fishes such as snappers, emperors and groupers, which are typically regarded as high-level mesopredators. We hypothesise that a degree of functional redundancy exists within this guild of predators, potentially explaining why shark-induced trophic cascades are rare or subtle in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. We also found that <span class="hlt">reef</span> sharks participate in multiple food webs (pelagic and benthic) and are sustained by multiple sources of primary production. We conclude that large conspicuous predators, be they elasmobranchs or any other taxon, should not axiomatically be regarded as apex predators without thorough analysis of their diet. In the case of <span class="hlt">reef</span> sharks, our dietary analyses suggest they should be reassigned to an alternative trophic group such as high-level mesopredators. This change will facilitate improved understanding of how <span class="hlt">reef</span> communities function and how removal of predators (e.g., via fishing) might affect <span class="hlt">ecosystem</span> properties.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.fs.usda.gov/treesearch/pubs/30117','TREESEARCH'); return false;" href="https://www.fs.usda.gov/treesearch/pubs/30117"><span>Hurricanes, <span class="hlt">Coral</span> <span class="hlt">Reefs</span> and Rainforests: Resistance, Ruin and Recovery in the Caribbean</span></a></p> <p><a target="_blank" href="http://www.fs.usda.gov/treesearch/">Treesearch</a></p> <p>A. E. Lugo; C. S. Rogers; S. W Nixon</p> <p>2000-01-01</p> <p>The coexistence of hurricanes, <span class="hlt">coral</span> <span class="hlt">reefs</span>, and rainforests in the Caribbean demonstrates that highly structured <span class="hlt">ecosystems</span> with great diversity can flourish in spite of recurring exposure to intense destructive energy. <span class="hlt">Coral</span> <span class="hlt">reefs</span> develop in response to wave energy and resist hurricanes largely by virtue of their structural strength. Limited fetch also protects some...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70191960','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70191960"><span>New interventions are needed to save <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Anthony, Ken; Bay, Line K.; Costanza, Robert; Firn, Jennifer; Gunn, John; Harrison, Peter; Heyward, Andrew; Lundgren, Petra; Mead, David; Moore, Tom; Mumby, Peter J.; van Oppen, Madeleine J. H.; Robertson, John; Runge, Michael C.; Suggett, David J.; Schaffelke, Britta; Wachenfeld, David; Walshe, Terry</p> <p>2017-01-01</p> <p>Since 2014, <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide have been subjected to the most extensive, prolonged and damaging heat wave in recorded history1. Large sections of Australia’s Great Barrier <span class="hlt">Reef</span> (GBR) bleached in response to heat stress in 2016 and 2017 — the first back-to-back event on record. Such severe <span class="hlt">coral</span> bleaching results in widespread loss of <span class="hlt">reef</span> habitat and biodiversity. Globally, we are facing catastrophic decline of these <span class="hlt">ecosystems</span>, which sustain services valued at around $US 10 trillion per year2, are home to over a million species3, and feed and support the livelihoods of hundreds of millions of people4. Model predictions indicate that mass <span class="hlt">coral</span> bleaching could become the new norm by 2050 (ref. 5). Critically, even if global warming can be kept within 1.5⁰C above preindustrial levels, shallow tropical seas would warm at least 0.4°C in coming decades, triggering frequent bleaching of the most sensitive habitat-forming <span class="hlt">coral</span> species6. This outlook poses a time-critical decision challenge for management and conservation. Existing conservation approaches, despite innovative governance arrangements7, could simply become insufficient to protect <span class="hlt">coral</span> <span class="hlt">reefs</span> under any expected climate future. Thus, for <span class="hlt">coral</span> <span class="hlt">reefs</span> to remain resilient and their services sustained, we argue that new and potentially riskier interventions must be implemented alongside conventional management efforts and strong action to curb global warming. We build the case for this strategy below.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_9");'>9</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li class="active"><span>11</span></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_11 --> <div id="page_12" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li class="active"><span>12</span></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="221"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28837911','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28837911"><span>Evaluating the attractiveness and effectiveness of artificial <span class="hlt">coral</span> <span class="hlt">reefs</span> as a recreational <span class="hlt">ecosystem</span> service.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Belhassen, Yaniv; Rousseau, Meghan; Tynyakov, Jenny; Shashar, Nadav</p> <p>2017-12-01</p> <p>Artificial <span class="hlt">reefs</span> are increasingly being used around the globe to attract recreational divers, for both environmental and commercial reasons. This paper examines artificial <span class="hlt">coral</span> <span class="hlt">reefs</span> as recreational <span class="hlt">ecosystem</span> services (RES) by evaluating their attractiveness and effectiveness and by examining divers' attitudes toward them. An online survey targeted at divers in Israel (n = 263) indicated that 35% of the dives in Eilat (a resort city on the shore of the Red Sea) take place at artificial <span class="hlt">reefs</span>. A second study monitored divers' behavior around the Tamar artificial <span class="hlt">reef</span>, one of the most popular submerged artificial <span class="hlt">reefs</span> in Eilat, and juxtaposed it with divers' activities around two adjacent natural <span class="hlt">reefs</span>. Findings show that the average diver density at the artificial <span class="hlt">reef</span> was higher than at the two nearby natural knolls and that the artificial <span class="hlt">reef</span> effectively diverts divers from natural knolls. A third study that examined the attitudes towards natural vs. artificial <span class="hlt">reefs</span> found that the artificial <span class="hlt">reefs</span> are considered more appropriate for training, but that divers feel less relaxed around them. By utilizing the RES approach as a framework, the study offers a comprehensive methodology that brings together the aesthetic, behavioral, and attitudinal aspects in terms of which artificial <span class="hlt">reefs</span> can be evaluated. Copyright © 2017 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSME12A..05R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSME12A..05R"><span>The importance of spatial fishing behavior for <span class="hlt">coral</span> <span class="hlt">reef</span> resilience</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Rassweiler, A.; Lauer, M.; Holbrook, S. J.</p> <p>2016-02-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are dynamic systems in which disturbances periodically reduce <span class="hlt">coral</span> cover but are normally followed by recovery of the <span class="hlt">coral</span> community. However, human activity may have reduced this resilience to disturbance in many <span class="hlt">coral</span> <span class="hlt">reef</span> systems, as an increasing number of <span class="hlt">reefs</span> have undergone persistent transitions from <span class="hlt">coral</span>-dominated to macroalgal-dominated community states. Fishing on herbivores may be one cause of reduced <span class="hlt">reef</span> resilience, as lower herbivory can make it easier for macroalgae to become established after a disturbance. Despite the acknowledged importance of fishing, relatively little attention has been paid to the potential for feedbacks between <span class="hlt">ecosystem</span> state and fisher behavior. Here we couple methods from environmental anthropology and ecology to explore these feedbacks between small-scale fisheries and <span class="hlt">coral</span> <span class="hlt">reefs</span> in Moorea, French Polynesia. We document how aspects of ecological state such as the abundance of macroalgae affect people's preference for fishing in particular lagoon habitats. We then incorporate biases towards fishing in certain ecological states into a spatially explicit bio-economic model of ecological dynamics and fishing in Moorea's lagoons. We find that feedbacks between spatial fishing behavior and ecological state can have critical effects on <span class="hlt">coral</span> <span class="hlt">reefs</span>. Presence of these spatial behaviors consistently leads to more coherence across the <span class="hlt">reef</span>-scape. However, whether this coherence manifests as increased resilience or increased fragility depends on the spatial scales of fisher movement and the magnitudes of disturbance. These results emphasize the potential importance of spatially-explicit fishing behavior for <span class="hlt">reef</span> resilience, but also the complexity of the feedbacks involved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012EGUGA..1411062W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012EGUGA..1411062W"><span><span class="hlt">Coral</span> calcification and <span class="hlt">reef</span> development under natural disturbances</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wall, M.; Schmidt, G. M.; Khokkiatiwong, S.; Richter, C.</p> <p>2012-04-01</p> <p><span class="hlt">Corals</span> are impressive <span class="hlt">ecosystem</span> engineers shaping and influencing tropical shallow water environments through their complex carbonate framework. Calcification a key physiological process determining <span class="hlt">coral</span> growth and <span class="hlt">reef</span> development, is highly dependent on constant environmental conditions, especially temperature, aragonite saturation and pH. However, not in all <span class="hlt">reef</span> areas such constant and stable conditons can be found. <span class="hlt">Coral</span> <span class="hlt">reefs</span> located in the Andaman Sea off the western Thai coast are subjected to large amplitude internal waves (LAIW), which induce strong oscillations in several physical and chemical environmental parameters and hence, offer the possibility to study the influence of fluctuating conditions on <span class="hlt">coral</span> <span class="hlt">reefs</span>. Characteristics of these oscillations as well as <span class="hlt">reef</span> framework development have been studied on <span class="hlt">reefs</span> of five islands, which are exposed to LAIW along their western sides and LAIW-sheltered on their eastern sides. LAIW reach these shallow water <span class="hlt">reef</span> areas all year round, however, strongest fluctuations were recorded during the dry season (November to May) with temperature drops of up to 8°C and pH values ranging from 8.22-7.90. Several (up to 12) sudden changes in environmental conditions can occur during a day, which differ in intensity and duration. Salinity, pH and oxygen are well correlated with changes in temperature and thus, temperature variability calculated as degree days cooling (DDC) was used as proxy for the complex set of environmental variability. This proxy enabled us to combine frequency and intensity of disturbances in one value and allowed for ranking each study location according to the severity of LAIW disturbances. Framework height was found to be clearly reduced in areas exposed to LAIW compared to the complex three-dimensional carbonate framework in the LAIW-sheltered <span class="hlt">reefs</span>. Moreover, it showed a strong linear correlation with DDC (Rsqr=0.732, p=0.007) indicating the negative effect of pulsed disturbances on <span class="hlt">coral</span> <span class="hlt">reef</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2010CorRe..29.1005C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2010CorRe..29.1005C"><span><span class="hlt">Coral</span>-macroalgal phase shifts or <span class="hlt">reef</span> resilience: links with diversity and functional roles of herbivorous fishes on the Great Barrier <span class="hlt">Reef</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Cheal, A. J.; MacNeil, M. Aaron; Cripps, E.; Emslie, M. J.; Jonker, M.; Schaffelke, B.; Sweatman, H.</p> <p>2010-12-01</p> <p>Changes from <span class="hlt">coral</span> to macroalgal dominance following disturbances to <span class="hlt">corals</span> symbolize the global degradation of <span class="hlt">coral</span> <span class="hlt">reefs</span>. The development of effective conservation measures depends on understanding the causes of such phase shifts. The prevailing view that <span class="hlt">coral</span>-macroalgal phase shifts commonly occur due to insufficient grazing by fishes is based on correlation with overfishing and inferences from models and small-scale experiments rather than on long-term quantitative field studies of fish communities at affected and resilient sites. Consequently, the specific characteristics of herbivorous fish communities that most promote <span class="hlt">reef</span> resilience under natural conditions are not known, though this information is critical for identifying vulnerable <span class="hlt">ecosystems</span>. In this study, 11 years of field surveys recorded the development of the most persistent <span class="hlt">coral</span>-macroalgal phase shift (>7 years) yet observed on Australia’s Great Barrier <span class="hlt">Reef</span> (GBR). This shift followed extensive <span class="hlt">coral</span> mortality caused by thermal stress (<span class="hlt">coral</span> bleaching) and damaging storms. Comparisons with two similar <span class="hlt">reefs</span> that suffered similar disturbances but recovered relatively rapidly demonstrated that the phase shift occurred despite high abundances of one herbivore functional group (scraping/excavating parrotfishes: Labridae). However, the shift was strongly associated with low fish herbivore diversity and low abundances of algal browsers (predominantly Siganidae) and grazers/detritivores (Acanthuridae), suggesting that one or more of these factors underpin <span class="hlt">reef</span> resilience and so deserve particular protection. Herbivorous fishes are not harvested on the GBR, and the phase shift was not enhanced by unusually high nutrient levels. This shows that unexploited populations of herbivorous fishes cannot ensure <span class="hlt">reef</span> resilience even under benign conditions and suggests that <span class="hlt">reefs</span> could lose resilience under relatively low fishing pressure. Predictions of more severe and widespread <span class="hlt">coral</span> mortality due to global</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17883494','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17883494"><span>Lag effects in the impacts of mass <span class="hlt">coral</span> bleaching on <span class="hlt">coral</span> <span class="hlt">reef</span> fish, fisheries, and <span class="hlt">ecosystems</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Graham, Nicholas A J; Wilson, Shaun K; Jennings, Simon; Polunin, Nicholas V C; Robinson, Jan; Bijoux, Jude P; Daw, Tim M</p> <p>2007-10-01</p> <p>Recent episodes of <span class="hlt">coral</span> bleaching have led to wide-scale loss of <span class="hlt">reef</span> <span class="hlt">corals</span> and raised concerns over the effectiveness of existing conservation and management efforts. The 1998 bleaching event was most severe in the western Indian Ocean, where <span class="hlt">coral</span> declined by up to 90% in some locations. Using fisheries-independent data, we assessed the long-term impacts of this event on fishery target species in the Seychelles, the overall size structure of the fish assemblage, and the effectiveness of two marine protected areas (MPAs) in protecting fish communities. The biomass of fished species above the size retained in fish traps changed little between 1994 and 2005, indicating no current effect on fishery yields. Biomass remained higher in MPAs, indicating they were effective in protecting fish stocks. Nevertheless, the size structure of the fish communities, as described with size-spectra analysis, changed in both fished areas and MPAs, with a decline in smaller fish (<30 cm) and an increase in larger fish (>45 cm). We believe this represents a time-lag response to a reduction in <span class="hlt">reef</span> structural complexity brought about because fishes are being lost through natural mortality and fishing, and are not being replaced by juveniles. This effect is expected to be greater in terms of fisheries productivity and, because congruent patterns are observed for herbivores, suggests that MPAs do not offer <span class="hlt">coral</span> <span class="hlt">reefs</span> long-term resilience to bleaching events. Corallivores and planktivores declined strikingly in abundance, particularly in MPAs, and this decline was associated with a similar pattern of decline in their preferred <span class="hlt">corals</span>. We suggest that climate-mediated disturbances, such as <span class="hlt">coral</span> bleaching, be at the fore of conservation planning for <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014CorRe..33..105L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014CorRe..33..105L"><span>Dissolved inorganic carbon and total alkalinity of a Hawaiian fringing <span class="hlt">reef</span>: chemical techniques for monitoring the effects of ocean acidification on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Lantz, C. A.; Atkinson, M. J.; Winn, C. W.; Kahng, S. E.</p> <p>2014-03-01</p> <p>There is an interest in developing approaches to "<span class="hlt">ecosystem</span>-based" management for <span class="hlt">coral</span> <span class="hlt">reefs</span>. One aspect of <span class="hlt">ecosystem</span> performance is to monitor carbon metabolism of whole communities. In an effort to explore robust techniques to monitor the metabolism of fringing <span class="hlt">reefs</span>, especially considering the possible effects of ocean acidification, a yearlong study of the carbonate chemistry of a nearshore fringing <span class="hlt">reef</span> in Hawaii was conducted. Diurnal changes in seawater carbonate chemistry were measured once a week in an algal-dominated and a <span class="hlt">coral</span>-dominated <span class="hlt">reef</span> flat on the Waimanalo fringing <span class="hlt">reef</span>, Hawaii, from April of 2010 until May of 2011. Calculated rates of gross primary production (GPP) and net community calcification ( G) were similar to previous estimates of community metabolism for other <span class="hlt">coral</span> <span class="hlt">reefs</span> (GPP 971 mmol C m-2 d-1; G 186 mmol CaCO3 m-2 d-1) and indicated that this <span class="hlt">reef</span> was balanced in terms of organic metabolism, exhibited net calcification, and was a net source of CO2 to the atmosphere. Average slopes of total alkalinity versus dissolved inorganic carbon (TA-DIC slope) for the <span class="hlt">coral</span>-dominated <span class="hlt">reef</span> flat exhibited a greater calcification-to-net photosynthesis ratio than for the algal-dominated <span class="hlt">reef</span> flat (<span class="hlt">coral</span> slope vs. algal slope). Over the course of the time series, TA-DIC slopes remained significantly different between sites and were not correlated with diurnal averages in <span class="hlt">reef</span>-water residence time or solar irradiance. These characteristic slopes for each <span class="hlt">reef</span> flat reflect the relationship between carbon and carbonate community metabolism and can be used as a tool to monitor <span class="hlt">ecosystem</span> function in response to ocean acidification.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUFMOS54A..01A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUFMOS54A..01A"><span>The <span class="hlt">Coral</span> <span class="hlt">Reef</span> pH-stat: An Important Defense Against Ocean Acidification? (Invited)</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Andersson, A. J.; Yeakel, K.; Bates, N.; de Putron, S.; Collins, A.</p> <p>2013-12-01</p> <p>Concerns have been raised on how <span class="hlt">coral</span> <span class="hlt">reefs</span> will be affected by ocean acidification (OA), but there are currently no direct predictions on how seawater CO2 chemistry and pH within <span class="hlt">coral</span> <span class="hlt">reefs</span> might change in response to OA. Projections of future changes in seawater pH and aragonite saturation state have only been applied to open ocean conditions surrounding <span class="hlt">coral</span> <span class="hlt">reef</span> environments rather than the <span class="hlt">reef</span> systems themselves. The seawater CO2 chemistry within heterogenous <span class="hlt">coral</span> <span class="hlt">reef</span> systems can be significantly different from that of the open ocean depending on the residence time, community composition and the major biogeochemical processes occurring on the <span class="hlt">reef</span>, i.e., net <span class="hlt">ecosystem</span> organic carbon production and calcification, which combined act to modify the seawater chemistry. We argue that these processes and <span class="hlt">coral</span> <span class="hlt">reefs</span> in general could as a pH-stat, partly regulating seawater pH on the <span class="hlt">reef</span> and offsetting changes in seawater chemistry imposed by ocean acidification. Based on observations from the Bermuda <span class="hlt">coral</span> <span class="hlt">reef</span>, we show that a range of anticipated biogeochemical responses of <span class="hlt">coral</span> <span class="hlt">reef</span> communities to OA by the end of this century could partially offset changes in seawater pH by an average of 12% to 24%.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25099220','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25099220"><span>The dynamics of architectural complexity on <span class="hlt">coral</span> <span class="hlt">reefs</span> under climate change.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bozec, Yves-Marie; Alvarez-Filip, Lorenzo; Mumby, Peter J</p> <p>2015-01-01</p> <p>One striking feature of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> is the complex benthic architecture which supports diverse and abundant fauna, particularly of <span class="hlt">reef</span> fish. <span class="hlt">Reef</span>-building <span class="hlt">corals</span> are in decline worldwide, with a corresponding loss of live <span class="hlt">coral</span> cover resulting in a loss of architectural complexity. Understanding the dynamics of the <span class="hlt">reef</span> architecture is therefore important to envision the ability of <span class="hlt">corals</span> to maintain functional habitats in an era of climate change. Here, we develop a mechanistic model of <span class="hlt">reef</span> topographical complexity for contemporary Caribbean <span class="hlt">reefs</span>. The model describes the dynamics of <span class="hlt">corals</span> and other benthic taxa under climate-driven disturbances (hurricanes and <span class="hlt">coral</span> bleaching). <span class="hlt">Corals</span> have a simplified shape with explicit diameter and height, allowing species-specific calculation of their colony surface and volume. Growth and the mechanical (hurricanes) and biological erosion (parrotfish) of carbonate skeletons are important in driving the pace of extension/reduction in the upper <span class="hlt">reef</span> surface, the net outcome being quantified by a simple surface roughness index (<span class="hlt">reef</span> rugosity). The model accurately simulated the decadal changes of <span class="hlt">coral</span> cover observed in Cozumel (Mexico) between 1984 and 2008, and provided a realistic hindcast of <span class="hlt">coral</span> colony-scale (1-10 m) changing rugosity over the same period. We then projected future changes of Caribbean <span class="hlt">reef</span> rugosity in response to global warming. Under severe and frequent thermal stress, the model predicted a dramatic loss of rugosity over the next two or three decades. Critically, <span class="hlt">reefs</span> with managed parrotfish populations were able to delay the general loss of architectural complexity, as the benefits of grazing in maintaining living <span class="hlt">coral</span> outweighed the bioerosion of dead <span class="hlt">coral</span> skeletons. Overall, this model provides the first explicit projections of <span class="hlt">reef</span> rugosity in a warming climate, and highlights the need of combining local (protecting and restoring high grazing) to global (mitigation of greenhouse gas</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2003EAEJA.....1429M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2003EAEJA.....1429M"><span><span class="hlt">Coral-reef</span> front migration in the Ryukyu Arc: responses of high latitude <span class="hlt">coral</span> <span class="hlt">reefs</span> to Quaternary climatic changes in North Western Pacific</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Matsuda, H.; Iryu, Y.; Machiyama, H.</p> <p>2003-04-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are tropic to subtropic coastal <span class="hlt">ecosystems</span> comprising very diverse organisms. Their community structure and geographic and local distribution are highly controlled by various environmental factors. Thus, their ancient counterparts, <span class="hlt">reef</span> deposits, provide important, high-resolution records of geoscientific events in tropic to subtropic shallow waters, such as vertical and lateral tectonic movements, sea-level fluctuations, paleoclimatic changes, and paleoceanographic variations. In order to clarify relationships between <span class="hlt">reef</span> formation and geoscientific events, it is necessary to investigate the <span class="hlt">reef</span> deposits at relatively higher latitudes within <span class="hlt">reef</span> provinces, because such <span class="hlt">reefs</span> were considered to be more sensitive to the environmental changes than those in proximal areas. It can be, therefore, considered that the northern or southern limit of <span class="hlt">reef</span> formation, herein termed the '<span class="hlt">coral-reef</span> front', may have migrated to higher and lower latitudes, respectively, responding to Pleistocene global warming and cooling associated with rapid, cyclic changes in climate and oceanographic conditions and with glacioeustatic sea-level rises and falls. Thus, this study mainly aims (1) to depict paleoeclimatic and paleoceanographic fluctuations in tropic to subtropic shallow-waters in details by reconstructing the <span class="hlt">coral-reef</span> front migration, (2) how and to what extent the <span class="hlt">reefs</span> responded to rapid environmental changes, and (3) to evaluate a role of <span class="hlt">coral</span> <span class="hlt">reefs</span> in a global carbon cycle. To resolve the problems described above, the Ryukyu Islands are one of the best fields. In this proposal, we will insist that the multiple drilling that covers submarine (IODP) and land (ICDP) areas is the only way to complete our purposes.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014BGD....11.5053Y','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014BGD....11.5053Y"><span>Mangrove habitats provide refuge from climate change for <span class="hlt">reef</span>-building <span class="hlt">corals</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Yates, K. K.; Rogers, C. S.; Herlan, J. J.; Brooks, G. R.; Smiley, N. A.; Larson, R. A.</p> <p>2014-03-01</p> <p> conditions, and biological influences on seawater chemistry generate chemical conditions that buffer against ocean acidification. This previously undocumented refuge for <span class="hlt">corals</span> provides evidence for adaptation of coastal organisms and <span class="hlt">ecosystem</span> transition due to recent climate change. Identifying and protecting other natural, non-<span class="hlt">reef</span> <span class="hlt">coral</span> refuges is critical for sustaining <span class="hlt">corals</span> and other <span class="hlt">reef</span> species into the future.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017PrOce.156..104N','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017PrOce.156..104N"><span>Planktonic trophic structure in a <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> - Grazing versus microbial food webs and the production of mesozooplankton</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Nakajima, Ryota; Yamazaki, Haruka; Lewis, Levi S.; Khen, Adi; Smith, Jennifer E.; Nakatomi, Nobuyuki; Kurihara, Haruko</p> <p>2017-08-01</p> <p>The relative contributions of grazing versus microbial food webs to the production of mesozooplankton communities in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> remains an important and understudied field of inquiry. Here, we investigated the biomass and production of component organisms within these two food webs, and compared them to those of mesozooplankton on a <span class="hlt">coral</span> <span class="hlt">reef</span> in Okinawa, Japan throughout four seasons in 2011-2012. The relative production of grazing (phytoplankton) and microbial (nano and microzooplankton) food webs were on average 39% (7-77%) and 37% (19-57%), respectively, of the food requirements of particle-feeding mesozooplankton. Carbon flows within this planktonic food web suggested that primary production from the grazing food web could not satisfy the nutritional demands of mesozooplankton, and that the microbial food web contributed a significant amount of nutrition to their diets. These results also show that the heterotrophic components of the microbial food web (nano and microzooplankton) and mesozooplankton consume the equivalent of the entire phytoplankton production (particulate net production) each day, while the microzooplankton were almost entirely eaten by higher trophic levels (mesozooplankton) each day. However, even the combined production from both the grazing and microbial food webs did not fulfill mesozooplankton food requirements in some seasons, explaining 26-53%, suggesting that detritus was used to compensate for nutritional deficiencies during these periods. Understanding the flow of energy throughout <span class="hlt">coral</span> <span class="hlt">reefs</span> requires a detailed accounting of pelagic sources and sinks of carbon. Our results provide such an assessment and indicate that detailed investigation on the origin and production of detritus is necessary to better understand pelagic trophodynamics in <span class="hlt">coral</span> <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014CorRe..33..303W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014CorRe..33..303W"><span>Herbivorous fishes, <span class="hlt">ecosystem</span> function and mobile links on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Welsh, J. Q.; Bellwood, D. R.</p> <p>2014-06-01</p> <p>Understanding large-scale movement of ecologically important taxa is key to both species and <span class="hlt">ecosystem</span> management. Those species responsible for maintaining functional connectivity between habitats are often called mobile links and are regarded as essential elements of resilience. By providing connectivity, they support resilience across spatial scales. Most marine organisms, including fishes, have long-term, biogeographic-scale connectivity through larval movement. Although most <span class="hlt">reef</span> species are highly site attached after larval settlement, some taxa may also be able to provide rapid, <span class="hlt">reef</span>-scale connectivity as adults. On <span class="hlt">coral</span> <span class="hlt">reefs</span>, the identity of such taxa and the extent of their mobility are not yet known. We use acoustic telemetry to monitor the movements of Kyphosus vaigiensis, one of the few <span class="hlt">reef</span> fishes that feeds on adult brown macroalgae. Unlike other benthic herbivorous fish species, it also exhibits large-scale (>2 km) movements. Individual K. vaigiensis cover, on average, a 2.5 km length of <span class="hlt">reef</span> (11 km maximum) each day. These large-scale movements suggest that this species may act as a mobile link, providing functional connectivity, should the need arise, and helping to support functional processes across habitats and spatial scales. An analysis of published studies of home ranges in <span class="hlt">reef</span> fishes found a consistent relationship between home range size and body length. K. vaigiensis is the sole herbivore to depart significantly from the expected home range-body size relationship, with home range sizes more comparable to exceptionally mobile large pelagic predators rather than other <span class="hlt">reef</span> herbivores. While the large-scale movements of K. vaigiensis reveal its potential capacity to enhance resilience over large areas, it also emphasizes the potential limitations of small marine reserves to protect some herbivore populations.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=341068&Lab=NHEERL&keyword=information&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=341068&Lab=NHEERL&keyword=information&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Implementing Biocriteria: <span class="hlt">Coral</span> <span class="hlt">Reef</span> Protection Using the Clean Water Act</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Biological assessments (surveying the presence, number, size and condition of fish, <span class="hlt">coral</span> and other biota) provide important information about the health and integrity of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Biological criteria are one means under the Clean Water Act (CWA) that managers can us...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70156015','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70156015"><span>The influence of grain size, grain color, and suspended-sediment concentration on light attenuation: why fine-grained terrestrial sediment is bad for <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span></span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Storlazzi, Curt; Norris, Benjamin; Rosenberger, Kurt</p> <p>2015-01-01</p> <p>Sediment has been shown to be a major stressor to <span class="hlt">coral</span> <span class="hlt">reefs</span> globally. Although many researchers have tested the impact of sedimentation on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> in both the laboratory and the field and some have measured the impact of suspended sediment on the photosynthetic response of <span class="hlt">corals</span>, there has yet to be a detailed investigation on how properties of the sediment itself can affect light availability for photosynthesis. We show that finer-grained and darker-colored sediment at higher suspended-sediment concentrations attenuates photosynthetically active radiation (PAR) significantly more than coarser, lighter-colored sediment at lower concentrations and provide PAR attenuation coefficients for various grain sizes, colors, and suspended-sediment concentrations that are needed for biophysical modeling. Because finer-grained sediment particles settle more slowly and are more susceptible to resuspension, they remain in the water column longer, thus causing greater net impact by reducing light essential for photosynthesis over a greater duration. This indicates that <span class="hlt">coral</span> <span class="hlt">reef</span> monitoring studies investigating sediment impacts should concentrate on measuring fine-grained lateritic and volcanic soils, as opposed to coarser-grained siliceous and carbonate sediment. Similarly, coastal restoration efforts and engineering solutions addressing long-term <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> health should focus on preferentially retaining those fine-grained soils rather than coarse silt and sand particles.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3578865','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3578865"><span>Digital <span class="hlt">Reef</span> Rugosity Estimates <span class="hlt">Coral</span> <span class="hlt">Reef</span> Habitat Complexity</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Dustan, Phillip; Doherty, Orla; Pardede, Shinta</p> <p>2013-01-01</p> <p>Ecological habitats with greater structural complexity contain more species due to increased niche diversity. This is especially apparent on <span class="hlt">coral</span> <span class="hlt">reefs</span> where individual <span class="hlt">coral</span> colonies aggregate to give a <span class="hlt">reef</span> its morphology, species zonation, and three dimensionality. Structural complexity is classically measured with a <span class="hlt">reef</span> rugosity index, which is the ratio of a straight line transect to the distance a flexible chain of equal length travels when draped over the <span class="hlt">reef</span> substrate; yet, other techniques from visual categories to remote sensing have been used to characterize structural complexity at scales from microhabitats to reefscapes. <span class="hlt">Reef</span>-scale methods either lack quantitative precision or are too time consuming to be routinely practical, while remotely sensed indices are mismatched to the finer scale morphology of <span class="hlt">coral</span> colonies and <span class="hlt">reef</span> habitats. In this communication a new digital technique, Digital <span class="hlt">Reef</span> Rugosity (DRR) is described which utilizes a self-contained water level gauge enabling a diver to quickly and accurately characterize rugosity with non-invasive millimeter scale measurements of <span class="hlt">coral</span> <span class="hlt">reef</span> surface height at decimeter intervals along meter scale transects. The precise measurements require very little post-processing and are easily imported into a spreadsheet for statistical analyses and modeling. To assess its applicability we investigated the relationship between DRR and fish community structure at four <span class="hlt">coral</span> <span class="hlt">reef</span> sites on Menjangan Island off the northwest corner of Bali, Indonesia and one on mainland Bali to the west of Menjangan Island; our findings show a positive relationship between DRR and fish diversity. Since structural complexity drives key ecological processes on <span class="hlt">coral</span> <span class="hlt">reefs</span>, we consider that DRR may become a useful quantitative community-level descriptor to characterize <span class="hlt">reef</span> complexity. PMID:23437380</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23437380','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23437380"><span>Digital <span class="hlt">reef</span> rugosity estimates <span class="hlt">coral</span> <span class="hlt">reef</span> habitat complexity.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Dustan, Phillip; Doherty, Orla; Pardede, Shinta</p> <p>2013-01-01</p> <p>Ecological habitats with greater structural complexity contain more species due to increased niche diversity. This is especially apparent on <span class="hlt">coral</span> <span class="hlt">reefs</span> where individual <span class="hlt">coral</span> colonies aggregate to give a <span class="hlt">reef</span> its morphology, species zonation, and three dimensionality. Structural complexity is classically measured with a <span class="hlt">reef</span> rugosity index, which is the ratio of a straight line transect to the distance a flexible chain of equal length travels when draped over the <span class="hlt">reef</span> substrate; yet, other techniques from visual categories to remote sensing have been used to characterize structural complexity at scales from microhabitats to reefscapes. <span class="hlt">Reef</span>-scale methods either lack quantitative precision or are too time consuming to be routinely practical, while remotely sensed indices are mismatched to the finer scale morphology of <span class="hlt">coral</span> colonies and <span class="hlt">reef</span> habitats. In this communication a new digital technique, Digital <span class="hlt">Reef</span> Rugosity (DRR) is described which utilizes a self-contained water level gauge enabling a diver to quickly and accurately characterize rugosity with non-invasive millimeter scale measurements of <span class="hlt">coral</span> <span class="hlt">reef</span> surface height at decimeter intervals along meter scale transects. The precise measurements require very little post-processing and are easily imported into a spreadsheet for statistical analyses and modeling. To assess its applicability we investigated the relationship between DRR and fish community structure at four <span class="hlt">coral</span> <span class="hlt">reef</span> sites on Menjangan Island off the northwest corner of Bali, Indonesia and one on mainland Bali to the west of Menjangan Island; our findings show a positive relationship between DRR and fish diversity. Since structural complexity drives key ecological processes on <span class="hlt">coral</span> <span class="hlt">reefs</span>, we consider that DRR may become a useful quantitative community-level descriptor to characterize <span class="hlt">reef</span> complexity.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/18565794','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/18565794"><span>Climate change, global warming and <span class="hlt">coral</span> <span class="hlt">reefs</span>: modelling the effects of temperature.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Crabbe, M James C</p> <p>2008-10-01</p> <p>Climate change and global warming have severe consequences for the survival of scleractinian (<span class="hlt">reef</span>-building) <span class="hlt">corals</span> and their associated <span class="hlt">ecosystems</span>. This review summarizes recent literature on the influence of temperature on <span class="hlt">coral</span> growth, <span class="hlt">coral</span> bleaching, and modelling the effects of high temperature on <span class="hlt">corals</span>. Satellite-based sea surface temperature (SST) and <span class="hlt">coral</span> bleaching information available on the internet is an important tool in monitoring and modelling <span class="hlt">coral</span> responses to temperature. Within the narrow temperature range for <span class="hlt">coral</span> growth, <span class="hlt">corals</span> can respond to rate of temperature change as well as to temperature per se. We need to continue to develop models of how non-steady-state processes such as global warming and climate change will affect <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3945051','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3945051"><span>Discovery of a living <span class="hlt">coral</span> <span class="hlt">reef</span> in the coastal waters of Iraq</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Pohl, Thomas; Al-Muqdadi, Sameh W.; Ali, Malik H.; Fawzi, Nadia Al-Mudaffar; Ehrlich, Hermann; Merkel, Broder</p> <p>2014-01-01</p> <p>Until now, it has been well-established that <span class="hlt">coral</span> complex in the Arabian/Persian Gulf only exist in the coastal regions of Bahrain, Iran, Kuwait, Oman, Qatar, Saudi Arabia, and United Arab Emirates and it was thought that there are no <span class="hlt">coral</span> <span class="hlt">reefs</span> in Iraq. However, here for the first time we show the existence of a living 28 km2 large <span class="hlt">coral</span> <span class="hlt">reef</span> in this country. These <span class="hlt">corals</span> are adapted to one of the most extreme <span class="hlt">coral</span>-bearing environments on earth: the seawater temperature in this area ranges between 14 and 34°C. The discovery of the unique <span class="hlt">coral</span> <span class="hlt">reef</span> oasis in the turbid coastal waters of Iraq will stimulate the interest of governmental agencies, environmental organizations, as well as of the international scientific community working on the fundamental understanding of <span class="hlt">coral</span> marine <span class="hlt">ecosystems</span> and global climate today. PMID:24603901</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24603901','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24603901"><span>Discovery of a living <span class="hlt">coral</span> <span class="hlt">reef</span> in the coastal waters of Iraq.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pohl, Thomas; Al-Muqdadi, Sameh W; Ali, Malik H; Fawzi, Nadia Al-Mudaffar; Ehrlich, Hermann; Merkel, Broder</p> <p>2014-03-06</p> <p>Until now, it has been well-established that <span class="hlt">coral</span> complex in the Arabian/Persian Gulf only exist in the coastal regions of Bahrain, Iran, Kuwait, Oman, Qatar, Saudi Arabia, and United Arab Emirates and it was thought that there are no <span class="hlt">coral</span> <span class="hlt">reefs</span> in Iraq. However, here for the first time we show the existence of a living 28 km(2) large <span class="hlt">coral</span> <span class="hlt">reef</span> in this country. These <span class="hlt">corals</span> are adapted to one of the most extreme <span class="hlt">coral</span>-bearing environments on earth: the seawater temperature in this area ranges between 14 and 34°C. The discovery of the unique <span class="hlt">coral</span> <span class="hlt">reef</span> oasis in the turbid coastal waters of Iraq will stimulate the interest of governmental agencies, environmental organizations, as well as of the international scientific community working on the fundamental understanding of <span class="hlt">coral</span> marine <span class="hlt">ecosystems</span> and global climate today.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29633512','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29633512"><span>Mass <span class="hlt">coral</span> bleaching causes biotic homogenization of <span class="hlt">reef</span> fish assemblages.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Richardson, Laura E; Graham, Nicholas A J; Pratchett, Morgan S; Eurich, Jacob G; Hoey, Andrew S</p> <p>2018-04-06</p> <p>Global climate change is altering community composition across many <span class="hlt">ecosystems</span> due to nonrandom species turnover, typically characterized by the loss of specialist species and increasing similarity of biological communities across spatial scales. As anthropogenic disturbances continue to alter species composition globally, there is a growing need to identify how species responses influence the establishment of distinct assemblages, such that management actions may be appropriately assigned. Here, we use trait-based analyses to compare temporal changes in five complementary indices of <span class="hlt">reef</span> fish assemblage structure among six taxonomically distinct <span class="hlt">coral</span> <span class="hlt">reef</span> habitats exposed to a system-wide thermal stress event. Our results revealed increased taxonomic and functional similarity of previously distinct <span class="hlt">reef</span> fish assemblages following mass <span class="hlt">coral</span> bleaching, with changes characterized by subtle, but significant, shifts toward predominance of small-bodied, algal-farming habitat generalists. Furthermore, while the taxonomic or functional richness of fish assemblages did not change across all habitats, an increase in functional originality indicated an overall loss of functional redundancy. We also found that prebleaching <span class="hlt">coral</span> composition better predicted changes in fish assemblage structure than the magnitude of <span class="hlt">coral</span> loss. These results emphasize how measures of alpha diversity can mask important changes in the structure and functioning of <span class="hlt">ecosystems</span> as assemblages reorganize. Our findings also highlight the role of <span class="hlt">coral</span> species composition in structuring communities and influencing the diversity of responses of <span class="hlt">reef</span> fishes to disturbance. As new <span class="hlt">coral</span> species configurations emerge, their desirability will hinge upon the composition of associated species and their capacity to maintain key ecological processes in spite of ongoing disturbances. © 2018 John Wiley & Sons Ltd.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_10");'>10</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li class="active"><span>12</span></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_12 --> <div id="page_13" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li class="active"><span>13</span></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="241"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25215941','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25215941"><span>Water column correction for <span class="hlt">coral</span> <span class="hlt">reef</span> studies by remote sensing.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Zoffoli, Maria Laura; Frouin, Robert; Kampel, Milton</p> <p>2014-09-11</p> <p>Human activity and natural climate trends constitute a major threat to <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide. Models predict a significant reduction in <span class="hlt">reef</span> spatial extension together with a decline in biodiversity in the relatively near future. In this context, monitoring programs to detect changes in <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are essential. In recent years, <span class="hlt">coral</span> <span class="hlt">reef</span> mapping using remote sensing data has benefited from instruments with better resolution and computational advances in storage and processing capabilities. However, the water column represents an additional complexity when extracting information from submerged substrates by remote sensing that demands a correction of its effect. In this article, the basic concepts of bottom substrate remote sensing and water column interference are presented. A compendium of methodologies developed to reduce water column effects in <span class="hlt">coral</span> <span class="hlt">ecosystems</span> studied by remote sensing that include their salient features, advantages and drawbacks is provided. Finally, algorithms to retrieve the bottom reflectance are applied to simulated data and actual remote sensing imagery and their performance is compared. The available methods are not able to completely eliminate the water column effect, but they can minimize its influence. Choosing the best method depends on the marine environment, available input data and desired outcome or scientific application.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27828972','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27828972"><span><span class="hlt">Coral</span> <span class="hlt">Reefs</span> and People in a High-CO2 World: Where Can Science Make a Difference to People?</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pendleton, Linwood; Comte, Adrien; Langdon, Chris; Ekstrom, Julia A; Cooley, Sarah R; Suatoni, Lisa; Beck, Michael W; Brander, Luke M; Burke, Lauretta; Cinner, Josh E; Doherty, Carolyn; Edwards, Peter E T; Gledhill, Dwight; Jiang, Li-Qing; van Hooidonk, Ruben J; Teh, Louise; Waldbusser, George G; Ritter, Jessica</p> <p>2016-01-01</p> <p>Increasing levels of carbon dioxide in the atmosphere put shallow, warm-water <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, and the people who depend upon them at risk from two key global environmental stresses: 1) elevated sea surface temperature (that can cause <span class="hlt">coral</span> bleaching and related mortality), and 2) ocean acidification. These global stressors: cannot be avoided by local management, compound local stressors, and hasten the loss of <span class="hlt">ecosystem</span> services. Impacts to people will be most grave where a) human dependence on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> is high, b) sea surface temperature reaches critical levels soonest, and c) ocean acidification levels are most severe. Where these elements align, swift action will be needed to protect people's lives and livelihoods, but such action must be informed by data and science. Designing policies to offset potential harm to <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> and people requires a better understanding of where CO2-related global environmental stresses could cause the most severe impacts. Mapping indicators has been proposed as a way of combining natural and social science data to identify policy actions even when the needed science is relatively nascent. To identify where people are at risk and where more science is needed, we map indicators of biological, physical and social science factors to understand how human dependence on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> will be affected by globally-driven threats to <span class="hlt">corals</span> expected in a high-CO2 world. Western Mexico, Micronesia, Indonesia and parts of Australia have high human dependence and will likely face severe combined threats. As a region, Southeast Asia is particularly at risk. Many of the countries most dependent upon <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are places for which we have the least robust data on ocean acidification. These areas require new data and interdisciplinary scientific research to help <span class="hlt">coral</span> <span class="hlt">reef</span>-dependent human communities better prepare for a high CO2 world.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.usgs.gov/fs/2009/3089/','USGSPUBS'); return false;" href="https://pubs.usgs.gov/fs/2009/3089/"><span>Science-Based Strategies for Sustaining <span class="hlt">Coral</span> <span class="hlt">Ecosystems</span></span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>,</p> <p>2009-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">ecosystems</span> and their natural capital are at risk. Greenhouse gas emissions, overfishing, and harmful land-use practices are damaging our <span class="hlt">coral</span> <span class="hlt">reefs</span>. Overwhelming scientific evidence indicates that the threats are serious, and if they are left unchecked, the ecological and social consequences will be significant and widespread. Although the primary stressors to <span class="hlt">coral</span> <span class="hlt">ecosystems</span> are known, science-based strategies are needed to more accurately explain natural processes and forecast human-induced change. Collaborations among managers and scientists and enhanced mapping, monitoring, research, and modeling can lead to effective mitigation plans. U.S. Geological Survey scientists and their partners assess <span class="hlt">coral</span> <span class="hlt">ecosystem</span> history, ecology, vulnerability, and resiliency and provide study results to decisionmakers who may devise policies to sustain <span class="hlt">coral</span> resources and the essential goods and services they provide.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018CorRe..37..201F','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018CorRe..37..201F"><span>Mesophotic <span class="hlt">coral-reef</span> environments depress the reproduction of the <span class="hlt">coral</span> Paramontastraea peresi in the Red Sea</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Feldman, Bar; Shlesinger, Tom; Loya, Yossi</p> <p>2018-03-01</p> <p>With more than 450 studied species, <span class="hlt">coral</span> reproduction is a well-known research field. However, the vast majority of <span class="hlt">coral</span> reproduction research has focused exclusively on shallow <span class="hlt">reefs</span>. The incentive for the present study was: (1) the recent accelerated global degradation of <span class="hlt">coral</span> <span class="hlt">reefs</span>; (2) the growing interest in mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> (MCEs; 30-120 m depth) and their potential to serve as a larval source for shallow <span class="hlt">reefs</span>; and (3) the lack of information on MCE <span class="hlt">coral</span> reproduction. Here, we compare the reproduction and ecology of the depth-generalist <span class="hlt">coral</span> Paramontastraea peresi between shallow (5-10 m) and mesophotic (40-45 m) habitats in the Gulf of Eilat/Aqaba, Red Sea. Field surveys were conducted to assess the living cover, abundance, and size frequency distribution of P. peresi. Four to six colonies from each habitat were sampled monthly between April 2015 and January 2017, and the gametogenesis cycles, fecundity, and oocyte sizes were measured. The reproductive cycle in the MCEs was shorter than in the shallow <span class="hlt">reef</span>. Despite having larger polyps, the mesophotic colonies contained significantly smaller and fewer oocytes per polyp. In spite of the relatively stable environmental conditions of the MCEs, which may contribute to <span class="hlt">coral</span> survival, scarcity of sunlight is probably a major energetic impediment to investment in reproduction by P. peresi at mesophotic depths. Further intensive reproductive studies in mesophotic <span class="hlt">reefs</span> are thus required to assess the ability of <span class="hlt">corals</span> in this environment to reproduce and constitute a larval source for depleted shallow-water <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4247404','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4247404"><span>Identifying multiple <span class="hlt">coral</span> <span class="hlt">reef</span> regimes and their drivers across the Hawaiian archipelago</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Jouffray, Jean-Baptiste; Nyström, Magnus; Norström, Albert V.; Williams, Ivor D.; Wedding, Lisa M.; Kittinger, John N.; Williams, Gareth J.</p> <p>2015-01-01</p> <p>Loss of <span class="hlt">coral</span> <span class="hlt">reef</span> resilience can lead to dramatic changes in benthic structure, often called regime shifts, which significantly alter <span class="hlt">ecosystem</span> processes and functioning. In the face of global change and increasing direct human impacts, there is an urgent need to anticipate and prevent undesirable regime shifts and, conversely, to reverse shifts in already degraded <span class="hlt">reef</span> systems. Such challenges require a better understanding of the human and natural drivers that support or undermine different <span class="hlt">reef</span> regimes. The Hawaiian archipelago extends across a wide gradient of natural and anthropogenic conditions and provides us a unique opportunity to investigate the relationships between multiple <span class="hlt">reef</span> regimes, their dynamics and potential drivers. We applied a combination of exploratory ordination methods and inferential statistics to one of the most comprehensive <span class="hlt">coral</span> <span class="hlt">reef</span> datasets available in order to detect, visualize and define potential multiple <span class="hlt">ecosystem</span> regimes. This study demonstrates the existence of three distinct <span class="hlt">reef</span> regimes dominated by hard <span class="hlt">corals</span>, turf algae or macroalgae. Results from boosted regression trees show nonlinear patterns among predictors that help to explain the occurrence of these regimes, and highlight herbivore biomass as the key driver in addition to effluent, latitude and depth.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/14765193','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/14765193"><span>Mangroves enhance the biomass of <span class="hlt">coral</span> <span class="hlt">reef</span> fish communities in the Caribbean.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mumby, Peter J; Edwards, Alasdair J; Arias-González, J Ernesto; Lindeman, Kenyon C; Blackwell, Paul G; Gall, Angela; Gorczynska, Malgosia I; Harborne, Alastair R; Pescod, Claire L; Renken, Henk; Wabnitz, Colette C C; Llewellyn, Ghislane</p> <p>2004-02-05</p> <p>Mangrove forests are one of the world's most threatened tropical <span class="hlt">ecosystems</span> with global loss exceeding 35% (ref. 1). Juvenile <span class="hlt">coral</span> <span class="hlt">reef</span> fish often inhabit mangroves, but the importance of these nurseries to <span class="hlt">reef</span> fish population dynamics has not been quantified. Indeed, mangroves might be expected to have negligible influence on <span class="hlt">reef</span> fish communities: juvenile fish can inhabit alternative habitats and fish populations may be regulated by other limiting factors such as larval supply or fishing. Here we show that mangroves are unexpectedly important, serving as an intermediate nursery habitat that may increase the survivorship of young fish. Mangroves in the Caribbean strongly influence the community structure of fish on neighbouring <span class="hlt">coral</span> <span class="hlt">reefs</span>. In addition, the biomass of several commercially important species is more than doubled when adult habitat is connected to mangroves. The largest herbivorous fish in the Atlantic, Scarus guacamaia, has a functional dependency on mangroves and has suffered local extinction after mangrove removal. Current rates of mangrove deforestation are likely to have severe deleterious consequences for the <span class="hlt">ecosystem</span> function, fisheries productivity and resilience of <span class="hlt">reefs</span>. Conservation efforts should protect connected corridors of mangroves, seagrass beds and <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2004Natur.427..533M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2004Natur.427..533M"><span>Mangroves enhance the biomass of <span class="hlt">coral</span> <span class="hlt">reef</span> fish communities in the Caribbean</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Mumby, Peter J.; Edwards, Alasdair J.; Ernesto Arias-González, J.; Lindeman, Kenyon C.; Blackwell, Paul G.; Gall, Angela; Gorczynska, Malgosia I.; Harborne, Alastair R.; Pescod, Claire L.; Renken, Henk; C. C. Wabnitz, Colette; Llewellyn, Ghislane</p> <p>2004-02-01</p> <p>Mangrove forests are one of the world's most threatened tropical <span class="hlt">ecosystems</span> with global loss exceeding 35% (ref. 1). Juvenile <span class="hlt">coral</span> <span class="hlt">reef</span> fish often inhabit mangroves, but the importance of these nurseries to <span class="hlt">reef</span> fish population dynamics has not been quantified. Indeed, mangroves might be expected to have negligible influence on <span class="hlt">reef</span> fish communities: juvenile fish can inhabit alternative habitats and fish populations may be regulated by other limiting factors such as larval supply or fishing. Here we show that mangroves are unexpectedly important, serving as an intermediate nursery habitat that may increase the survivorship of young fish. Mangroves in the Caribbean strongly influence the community structure of fish on neighbouring <span class="hlt">coral</span> <span class="hlt">reefs</span>. In addition, the biomass of several commercially important species is more than doubled when adult habitat is connected to mangroves. The largest herbivorous fish in the Atlantic, Scarus guacamaia, has a functional dependency on mangroves and has suffered local extinction after mangrove removal. Current rates of mangrove deforestation are likely to have severe deleterious consequences for the <span class="hlt">ecosystem</span> function, fisheries productivity and resilience of <span class="hlt">reefs</span>. Conservation efforts should protect connected corridors of mangroves, seagrass beds and <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27564866','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27564866"><span>Fishing degrades size structure of <span class="hlt">coral</span> <span class="hlt">reef</span> fish communities.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Robinson, James P W; Williams, Ivor D; Edwards, Andrew M; McPherson, Jana; Yeager, Lauren; Vigliola, Laurent; Brainard, Russell E; Baum, Julia K</p> <p>2017-03-01</p> <p>Fishing pressure on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> has been frequently linked to reductions of large fishes and <span class="hlt">reef</span> fish biomass. Associated impacts on overall community structure are, however, less clear. In size-structured aquatic <span class="hlt">ecosystems</span>, fishing impacts are commonly quantified using size spectra, which describe the distribution of individual body sizes within a community. We examined the size spectra and biomass of <span class="hlt">coral</span> <span class="hlt">reef</span> fish communities at 38 US-affiliated Pacific islands that ranged in human presence from near pristine to human population centers. Size spectra 'steepened' steadily with increasing human population and proximity to market due to a reduction in the relative biomass of large fishes and an increase in the dominance of small fishes. <span class="hlt">Reef</span> fish biomass was substantially lower on inhabited islands than uninhabited ones, even at inhabited islands with the lowest levels of human presence. We found that on populated islands size spectra exponents decreased (analogous to size spectra steepening) linearly with declining biomass, whereas on uninhabited islands there was no relationship. Size spectra were steeper in regions of low sea surface temperature but were insensitive to variation in other environmental and geomorphic covariates. In contrast, <span class="hlt">reef</span> fish biomass was highly sensitive to oceanographic conditions, being influenced by both oceanic productivity and sea surface temperature. Our results suggest that community size structure may be a more robust indicator than fish biomass to increasing human presence and that size spectra are reliable indicators of exploitation impacts across regions of different fish community compositions, environmental drivers, and fisheries types. Size-based approaches that link directly to functional properties of fish communities, and are relatively insensitive to abiotic variation across biogeographic regions, offer great potential for developing our understanding of fishing impacts in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. © 2016</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29503866','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29503866"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> structural complexity provides important coastal protection from waves under rising sea levels.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Harris, Daniel L; Rovere, Alessio; Casella, Elisa; Power, Hannah; Canavesio, Remy; Collin, Antoine; Pomeroy, Andrew; Webster, Jody M; Parravicini, Valeriano</p> <p>2018-02-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are diverse <span class="hlt">ecosystems</span> that support millions of people worldwide by providing coastal protection from waves. Climate change and human impacts are leading to degraded <span class="hlt">coral</span> <span class="hlt">reefs</span> and to rising sea levels, posing concerns for the protection of tropical coastal regions in the near future. We use a wave dissipation model calibrated with empirical wave data to calculate the future increase of back-<span class="hlt">reef</span> wave height. We show that, in the near future, the structural complexity of <span class="hlt">coral</span> <span class="hlt">reefs</span> is more important than sea-level rise in determining the coastal protection provided by <span class="hlt">coral</span> <span class="hlt">reefs</span> from average waves. We also show that a significant increase in average wave heights could occur at present sea level if there is sustained degradation of benthic structural complexity. Our results highlight that maintaining the structural complexity of <span class="hlt">coral</span> <span class="hlt">reefs</span> is key to ensure coastal protection on tropical coastlines in the future.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5829992','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5829992"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> structural complexity provides important coastal protection from waves under rising sea levels</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Harris, Daniel L.; Rovere, Alessio; Casella, Elisa; Power, Hannah; Canavesio, Remy; Collin, Antoine; Pomeroy, Andrew; Webster, Jody M.; Parravicini, Valeriano</p> <p>2018-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are diverse <span class="hlt">ecosystems</span> that support millions of people worldwide by providing coastal protection from waves. Climate change and human impacts are leading to degraded <span class="hlt">coral</span> <span class="hlt">reefs</span> and to rising sea levels, posing concerns for the protection of tropical coastal regions in the near future. We use a wave dissipation model calibrated with empirical wave data to calculate the future increase of back-<span class="hlt">reef</span> wave height. We show that, in the near future, the structural complexity of <span class="hlt">coral</span> <span class="hlt">reefs</span> is more important than sea-level rise in determining the coastal protection provided by <span class="hlt">coral</span> <span class="hlt">reefs</span> from average waves. We also show that a significant increase in average wave heights could occur at present sea level if there is sustained degradation of benthic structural complexity. Our results highlight that maintaining the structural complexity of <span class="hlt">coral</span> <span class="hlt">reefs</span> is key to ensure coastal protection on tropical coastlines in the future. PMID:29503866</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5102364','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5102364"><span><span class="hlt">Coral</span> <span class="hlt">Reefs</span> and People in a High-CO2 World: Where Can Science Make a Difference to People?</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Langdon, Chris; Ekstrom, Julia A.; Cooley, Sarah R.; Suatoni, Lisa; Beck, Michael W.; Brander, Luke M.; Burke, Lauretta; Cinner, Josh E.; Doherty, Carolyn; Edwards, Peter E. T.; Gledhill, Dwight; Jiang, Li-Qing; van Hooidonk, Ruben J.; Teh, Louise; Waldbusser, George G.; Ritter, Jessica</p> <p>2016-01-01</p> <p><span class="hlt">Reefs</span> and People at Risk Increasing levels of carbon dioxide in the atmosphere put shallow, warm-water <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, and the people who depend upon them at risk from two key global environmental stresses: 1) elevated sea surface temperature (that can cause <span class="hlt">coral</span> bleaching and related mortality), and 2) ocean acidification. These global stressors: cannot be avoided by local management, compound local stressors, and hasten the loss of <span class="hlt">ecosystem</span> services. Impacts to people will be most grave where a) human dependence on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> is high, b) sea surface temperature reaches critical levels soonest, and c) ocean acidification levels are most severe. Where these elements align, swift action will be needed to protect people’s lives and livelihoods, but such action must be informed by data and science. An Indicator Approach Designing policies to offset potential harm to <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> and people requires a better understanding of where CO2-related global environmental stresses could cause the most severe impacts. Mapping indicators has been proposed as a way of combining natural and social science data to identify policy actions even when the needed science is relatively nascent. To identify where people are at risk and where more science is needed, we map indicators of biological, physical and social science factors to understand how human dependence on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> will be affected by globally-driven threats to <span class="hlt">corals</span> expected in a high-CO2 world. Western Mexico, Micronesia, Indonesia and parts of Australia have high human dependence and will likely face severe combined threats. As a region, Southeast Asia is particularly at risk. Many of the countries most dependent upon <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are places for which we have the least robust data on ocean acidification. These areas require new data and interdisciplinary scientific research to help <span class="hlt">coral</span> <span class="hlt">reef</span>-dependent human communities better prepare for a high CO2 world. PMID:27828972</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2244711','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2244711"><span>Baselines and Degradation of <span class="hlt">Coral</span> <span class="hlt">Reefs</span> in the Northern Line Islands</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Sandin, Stuart A.; Smith, Jennifer E.; DeMartini, Edward E.; Dinsdale, Elizabeth A.; Donner, Simon D.; Friedlander, Alan M.; Konotchick, Talina; Malay, Machel; Maragos, James E.; Obura, David; Pantos, Olga; Paulay, Gustav; Richie, Morgan; Rohwer, Forest; Schroeder, Robert E.; Walsh, Sheila; Jackson, Jeremy B. C.; Knowlton, Nancy; Sala, Enric</p> <p>2008-01-01</p> <p>Effective conservation requires rigorous baselines of pristine conditions to assess the impacts of human activities and to evaluate the efficacy of management. Most <span class="hlt">coral</span> <span class="hlt">reefs</span> are moderately to severely degraded by local human activities such as fishing and pollution as well as global change, hence it is difficult to separate local from global effects. To this end, we surveyed <span class="hlt">coral</span> <span class="hlt">reefs</span> on uninhabited atolls in the northern Line Islands to provide a baseline of <span class="hlt">reef</span> community structure, and on increasingly populated atolls to document changes associated with human activities. We found that top predators and <span class="hlt">reef</span>-building organisms dominated unpopulated Kingman and Palmyra, while small planktivorous fishes and fleshy algae dominated the populated atolls of Tabuaeran and Kiritimati. Sharks and other top predators overwhelmed the fish assemblages on Kingman and Palmyra so that the biomass pyramid was inverted (top-heavy). In contrast, the biomass pyramid at Tabuaeran and Kiritimati exhibited the typical bottom-heavy pattern. <span class="hlt">Reefs</span> without people exhibited less <span class="hlt">coral</span> disease and greater <span class="hlt">coral</span> recruitment relative to more inhabited <span class="hlt">reefs</span>. Thus, protection from overfishing and pollution appears to increase the resilience of <span class="hlt">reef</span> <span class="hlt">ecosystems</span> to the effects of global warming. PMID:18301734</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2003EAEJA....11772E','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2003EAEJA....11772E"><span>Eutrophication processes in the Gulf of Eilat (Aqaba), Red-Sea, and their effects on the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Erez, J.; Iluz, D.; Zakai, D.; Silverman, J.; Lazar, B.</p> <p>2003-04-01</p> <p>In the past few years (since 1998) an on going eutrophication process has been observed in the Northern Gulf of Eilat. Nutrient levels have increased both in the deep and in the coastal waters. In parallel, the phytoplankton productivity in the open sea has increased by a factor of 3 from 100 to 300 gCm-2y-1. The main source of these nutrients is caged fish farms moored near the North Beach, which over the past 5 years have released more then 300 tons N annually. Surface circulation transports part of the nutrient-algae rich surface water along the Israeli coast, where they have been detected during the stratified period near the <span class="hlt">coral</span> <span class="hlt">reef</span> in the Nature Reserve. The bulk of the nutrients released from the fish cages are taken up by phytoplankton and increase the productivity of the pelagic <span class="hlt">ecosystem</span>. Phytoplankton sinking and zooplankton grazing transport these nutrients to the deep water, below the thermocline where we observed a 50% increase in nitrate and phosphate concentrations relative to the previous decade. During the winter, vertical mixing brings these nutrients to the photic zone where massive blooms of benthic algae are observed in the coastal zone. These blooms are often associated with high <span class="hlt">coral</span> mortality and have reduced live <span class="hlt">coral</span> cover by 50% in the winter of 2000. Calcification rates of the <span class="hlt">reef</span> <span class="hlt">ecosystem</span> have decreased by a factor of 3--4 compared to earlier measurements in 1989--1991 while the photosynthesis to respiration ratio have increased from 1.0 to values higher then 1.5. These observations demonstrate the detrimental effects of anthropogenic nutrient enrichment on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4444195','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4444195"><span>Linking Demographic Processes of Juvenile <span class="hlt">Corals</span> to Benthic Recovery Trajectories in Two Common <span class="hlt">Reef</span> Habitats</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Doropoulos, Christopher; Ward, Selina; Roff, George; González-Rivero, Manuel; Mumby, Peter J.</p> <p>2015-01-01</p> <p>Tropical <span class="hlt">reefs</span> are dynamic <span class="hlt">ecosystems</span> that host diverse <span class="hlt">coral</span> assemblages with different life-history strategies. Here, we quantified how juvenile (<50 mm) <span class="hlt">coral</span> demographics influenced benthic <span class="hlt">coral</span> structure in <span class="hlt">reef</span> flat and <span class="hlt">reef</span> slope habitats on the southern Great Barrier <span class="hlt">Reef</span>, Australia. Permanent plots and settlement tiles were monitored every six months for three years in each habitat. These environments exhibited profound differences: the <span class="hlt">reef</span> slope was characterised by 95% less macroalgal cover, and twice the amount of available settlement substrata and rates of <span class="hlt">coral</span> settlement than the <span class="hlt">reef</span> flat. Consequently, post-settlement <span class="hlt">coral</span> survival in the <span class="hlt">reef</span> slope was substantially higher than that of the <span class="hlt">reef</span> flat, and resulted in a rapid increase in <span class="hlt">coral</span> cover from 7 to 31% in 2.5 years. In contrast, <span class="hlt">coral</span> cover on the <span class="hlt">reef</span> flat remained low (~10%), whereas macroalgal cover increased from 23 to 45%. A positive stock-recruitment relationship was found in brooding <span class="hlt">corals</span> in both habitats; however, brooding <span class="hlt">corals</span> were not directly responsible for the observed changes in <span class="hlt">coral</span> cover. Rather, the rapid increase on the <span class="hlt">reef</span> slope resulted from high abundances of broadcast spawning Acropora recruits. Incorporating our results into transition matrix models demonstrated that most <span class="hlt">corals</span> escape mortality once they exceed 50 mm, but for smaller <span class="hlt">corals</span> mortality in brooders was double those of spawners (i.e. acroporids and massive <span class="hlt">corals</span>). For <span class="hlt">corals</span> on the <span class="hlt">reef</span> flat, sensitivity analysis demonstrated that growth and mortality of larger juveniles (21–50 mm) highly influenced population dynamics; whereas the recruitment, growth and mortality of smaller <span class="hlt">corals</span> (<20 mm) had the highest influence on <span class="hlt">reef</span> slope population dynamics. Our results provide insight into the population dynamics and recovery trajectories in disparate <span class="hlt">reef</span> habitats, and highlight the importance of acroporid recruitment in driving rapid increases in <span class="hlt">coral</span> cover following large-scale perturbation</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26009892','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26009892"><span>Linking demographic processes of juvenile <span class="hlt">corals</span> to benthic recovery trajectories in two common <span class="hlt">reef</span> habitats.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Doropoulos, Christopher; Ward, Selina; Roff, George; González-Rivero, Manuel; Mumby, Peter J</p> <p>2015-01-01</p> <p>Tropical <span class="hlt">reefs</span> are dynamic <span class="hlt">ecosystems</span> that host diverse <span class="hlt">coral</span> assemblages with different life-history strategies. Here, we quantified how juvenile (<50 mm) <span class="hlt">coral</span> demographics influenced benthic <span class="hlt">coral</span> structure in <span class="hlt">reef</span> flat and <span class="hlt">reef</span> slope habitats on the southern Great Barrier <span class="hlt">Reef</span>, Australia. Permanent plots and settlement tiles were monitored every six months for three years in each habitat. These environments exhibited profound differences: the <span class="hlt">reef</span> slope was characterised by 95% less macroalgal cover, and twice the amount of available settlement substrata and rates of <span class="hlt">coral</span> settlement than the <span class="hlt">reef</span> flat. Consequently, post-settlement <span class="hlt">coral</span> survival in the <span class="hlt">reef</span> slope was substantially higher than that of the <span class="hlt">reef</span> flat, and resulted in a rapid increase in <span class="hlt">coral</span> cover from 7 to 31% in 2.5 years. In contrast, <span class="hlt">coral</span> cover on the <span class="hlt">reef</span> flat remained low (~10%), whereas macroalgal cover increased from 23 to 45%. A positive stock-recruitment relationship was found in brooding <span class="hlt">corals</span> in both habitats; however, brooding <span class="hlt">corals</span> were not directly responsible for the observed changes in <span class="hlt">coral</span> cover. Rather, the rapid increase on the <span class="hlt">reef</span> slope resulted from high abundances of broadcast spawning Acropora recruits. Incorporating our results into transition matrix models demonstrated that most <span class="hlt">corals</span> escape mortality once they exceed 50 mm, but for smaller <span class="hlt">corals</span> mortality in brooders was double those of spawners (i.e. acroporids and massive <span class="hlt">corals</span>). For <span class="hlt">corals</span> on the <span class="hlt">reef</span> flat, sensitivity analysis demonstrated that growth and mortality of larger juveniles (21-50 mm) highly influenced population dynamics; whereas the recruitment, growth and mortality of smaller <span class="hlt">corals</span> (<20 mm) had the highest influence on <span class="hlt">reef</span> slope population dynamics. Our results provide insight into the population dynamics and recovery trajectories in disparate <span class="hlt">reef</span> habitats, and highlight the importance of acroporid recruitment in driving rapid increases in <span class="hlt">coral</span> cover following large-scale perturbation in</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=82373&keyword=temperature+AND+classes&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=82373&keyword=temperature+AND+classes&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>GLOBAL CHANGE EFFECTS ON <span class="hlt">CORAL</span> <span class="hlt">REEF</span> CONDITION</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Fisher, W., W. Davis, J. Campbell, L. Courtney, P. Harris, B. Hemmer, M. Parsons, B. Quarles and D. Santavy. In press. Global Change Effects on <span class="hlt">Coral</span> <span class="hlt">Reef</span> Condition (Abstract). To be presented at the EPA Science Forum: Healthy Communities and <span class="hlt">Ecosystems</span>, 1-3 June 2004, Washington...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2014-title40-vol25/pdf/CFR-2014-title40-vol25-sec230-44.pdf','CFR2014'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2014-title40-vol25/pdf/CFR-2014-title40-vol25-sec230-44.pdf"><span>40 CFR 230.44 - <span class="hlt">Coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2014&page.go=Go">Code of Federal Regulations, 2014 CFR</a></p> <p></p> <p>2014-07-01</p> <p>... 40 Protection of Environment 25 2014-07-01 2014-07-01 false <span class="hlt">Coral</span> <span class="hlt">reefs</span>. 230.44 Section 230.44... Aquatic Sites § 230.44 <span class="hlt">Coral</span> <span class="hlt">reefs</span>. (a) <span class="hlt">Coral</span> <span class="hlt">reefs</span> consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the <span class="hlt">reef</span>. (b) Possible loss of values: The discharge of dredged or...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2012-title40-vol26/pdf/CFR-2012-title40-vol26-sec230-44.pdf','CFR2012'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2012-title40-vol26/pdf/CFR-2012-title40-vol26-sec230-44.pdf"><span>40 CFR 230.44 - <span class="hlt">Coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2012&page.go=Go">Code of Federal Regulations, 2012 CFR</a></p> <p></p> <p>2012-07-01</p> <p>... 40 Protection of Environment 26 2012-07-01 2011-07-01 true <span class="hlt">Coral</span> <span class="hlt">reefs</span>. 230.44 Section 230.44... Aquatic Sites § 230.44 <span class="hlt">Coral</span> <span class="hlt">reefs</span>. (a) <span class="hlt">Coral</span> <span class="hlt">reefs</span> consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the <span class="hlt">reef</span>. (b) Possible loss of values: The discharge of dredged or...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2013-title40-vol26/pdf/CFR-2013-title40-vol26-sec230-44.pdf','CFR2013'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2013-title40-vol26/pdf/CFR-2013-title40-vol26-sec230-44.pdf"><span>40 CFR 230.44 - <span class="hlt">Coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2013&page.go=Go">Code of Federal Regulations, 2013 CFR</a></p> <p></p> <p>2013-07-01</p> <p>... 40 Protection of Environment 26 2013-07-01 2013-07-01 false <span class="hlt">Coral</span> <span class="hlt">reefs</span>. 230.44 Section 230.44... Aquatic Sites § 230.44 <span class="hlt">Coral</span> <span class="hlt">reefs</span>. (a) <span class="hlt">Coral</span> <span class="hlt">reefs</span> consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the <span class="hlt">reef</span>. (b) Possible loss of values: The discharge of dredged or...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2011-title40-vol25/pdf/CFR-2011-title40-vol25-sec230-44.pdf','CFR2011'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2011-title40-vol25/pdf/CFR-2011-title40-vol25-sec230-44.pdf"><span>40 CFR 230.44 - <span class="hlt">Coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2011&page.go=Go">Code of Federal Regulations, 2011 CFR</a></p> <p></p> <p>2011-07-01</p> <p>... 40 Protection of Environment 25 2011-07-01 2011-07-01 false <span class="hlt">Coral</span> <span class="hlt">reefs</span>. 230.44 Section 230.44... Aquatic Sites § 230.44 <span class="hlt">Coral</span> <span class="hlt">reefs</span>. (a) <span class="hlt">Coral</span> <span class="hlt">reefs</span> consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the <span class="hlt">reef</span>. (b) Possible loss of values: The discharge of dredged or...</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_11");'>11</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li class="active"><span>13</span></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_13 --> <div id="page_14" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li class="active"><span>14</span></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="261"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/CFR-2010-title40-vol24/pdf/CFR-2010-title40-vol24-sec230-44.pdf','CFR'); return false;" href="https://www.gpo.gov/fdsys/pkg/CFR-2010-title40-vol24/pdf/CFR-2010-title40-vol24-sec230-44.pdf"><span>40 CFR 230.44 - <span class="hlt">Coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collectionCfr.action?selectedYearFrom=2010&page.go=Go">Code of Federal Regulations, 2010 CFR</a></p> <p></p> <p>2010-07-01</p> <p>... 40 Protection of Environment 24 2010-07-01 2010-07-01 false <span class="hlt">Coral</span> <span class="hlt">reefs</span>. 230.44 Section 230.44... Aquatic Sites § 230.44 <span class="hlt">Coral</span> <span class="hlt">reefs</span>. (a) <span class="hlt">Coral</span> <span class="hlt">reefs</span> consist of the skeletal deposit, usually of calcareous... organisms present in growing portions of the <span class="hlt">reef</span>. (b) Possible loss of values: The discharge of dredged or...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017CorRe..36....1B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017CorRe..36....1B"><span>Working with, not against, <span class="hlt">coral-reef</span> fisheries</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Birkeland, Charles</p> <p>2017-03-01</p> <p>The fisheries policies of some Pacific island nations are more appropriate to the biology of their resources than are some of the fisheries policies of more industrialized countries. Exclusive local ownership of natural resources in Palau encourages adjustive management on biologically relevant scales of time and space and promotes responsibility by reducing the tragedy of the commons. The presence of large individuals in fish populations and adequate size of spawning aggregations are more efficient and meaningful cues for timely management than are surveys of abundance or biomass. Taking fish from populations more than halfway to their carrying capacity is working favorably with the fishery because removing fish potentially increases resource stability by negative feedback between stock size and population production. Taking the same amount of fish from a population below half its carrying capacity is working against the fishery, making the population unstable, because reducing the reproductive stock potentially accelerates reduction of the population production by positive feedback. <span class="hlt">Reef</span> fish are consumed locally, while Palauan laws ban the export of <span class="hlt">reef</span> resources. This is consistent with the high gross primary production with little excess net production from undisturbed <span class="hlt">coral-reef</span> <span class="hlt">ecosystems</span>. The relatively rapid growth rates, short life spans, reliable recruitment and wide-ranging movements of open-ocean fishes such as scombrids make them much more productive than <span class="hlt">coral-reef</span> fishes. The greater fisheries yield per square kilometer in the open ocean multiplied by well over a thousand times the area of the exclusive economic zone than that of Palau's <span class="hlt">coral</span> <span class="hlt">reefs</span> should encourage Palauans to keep <span class="hlt">reef</span> fishes for subsistence and to feed tourists open-ocean fishes. Fisheries having only artisanal means should be encouraged to increase the yield and sustainability by moving away from <span class="hlt">coral</span> <span class="hlt">reefs</span> to bulk harvesting of nearshore pelagics.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4439049','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4439049"><span><span class="hlt">Coral</span> Settlement on a Highly Disturbed Equatorial <span class="hlt">Reef</span> System</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Bauman, Andrew G.; Guest, James R.; Dunshea, Glenn; Low, Jeffery; Todd, Peter A.; Steinberg, Peter D.</p> <p>2015-01-01</p> <p>Processes occurring early in the life stages of <span class="hlt">corals</span> can greatly influence the demography of <span class="hlt">coral</span> populations, and successful settlement of <span class="hlt">coral</span> larvae that leads to recruitment is a critical life history stage for <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Although <span class="hlt">corals</span> in Singapore persist in one the world’s most anthropogenically impacted <span class="hlt">reef</span> systems, our understanding of the role of <span class="hlt">coral</span> settlement in the persistence of <span class="hlt">coral</span> communities in Singapore remains limited. Spatial and temporal patterns of <span class="hlt">coral</span> settlement were examined at 7 sites in the southern islands of Singapore, using settlement tiles deployed and collected every 3 months from 2011 to 2013. Settlement occurred year round, but varied significantly across time and space. Annual <span class="hlt">coral</span> settlement was low (~54.72 spat m-2 yr-1) relative to other equatorial regions, but there was evidence of temporal variation in settlement rates. Peak settlement occurred between March–May and September–November, coinciding with annual <span class="hlt">coral</span> spawning periods (March–April and October), while the lowest settlement occurred from December–February during the northeast monsoon. A period of high settlement was also observed between June and August in the first year (2011/12), possibly due to some species spawning outside predicted spawning periods, larvae settling from other locations or extended larval settlement competency periods. Settlement rates varied significantly among sites, but spatial variation was relatively consistent between years, suggesting the strong effects of local <span class="hlt">coral</span> assemblages or environmental conditions. Pocilloporidae were the most abundant <span class="hlt">coral</span> spat (83.6%), while Poritidae comprised only 6% of the spat, and Acroporidae <1%. Other, unidentifiable families represented 10% of the <span class="hlt">coral</span> spat. These results indicate that current settlement patterns are reinforcing the local adult assemblage structure (‘others’; i.e. sediment-tolerant <span class="hlt">coral</span> taxa) in Singapore, but that the replenishment capacity of</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25992562','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25992562"><span><span class="hlt">Coral</span> settlement on a highly disturbed equatorial <span class="hlt">reef</span> system.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bauman, Andrew G; Guest, James R; Dunshea, Glenn; Low, Jeffery; Todd, Peter A; Steinberg, Peter D</p> <p>2015-01-01</p> <p>Processes occurring early in the life stages of <span class="hlt">corals</span> can greatly influence the demography of <span class="hlt">coral</span> populations, and successful settlement of <span class="hlt">coral</span> larvae that leads to recruitment is a critical life history stage for <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Although <span class="hlt">corals</span> in Singapore persist in one the world's most anthropogenically impacted <span class="hlt">reef</span> systems, our understanding of the role of <span class="hlt">coral</span> settlement in the persistence of <span class="hlt">coral</span> communities in Singapore remains limited. Spatial and temporal patterns of <span class="hlt">coral</span> settlement were examined at 7 sites in the southern islands of Singapore, using settlement tiles deployed and collected every 3 months from 2011 to 2013. Settlement occurred year round, but varied significantly across time and space. Annual <span class="hlt">coral</span> settlement was low (~54.72 spat m(-2) yr(-1)) relative to other equatorial regions, but there was evidence of temporal variation in settlement rates. Peak settlement occurred between March-May and September-November, coinciding with annual <span class="hlt">coral</span> spawning periods (March-April and October), while the lowest settlement occurred from December-February during the northeast monsoon. A period of high settlement was also observed between June and August in the first year (2011/12), possibly due to some species spawning outside predicted spawning periods, larvae settling from other locations or extended larval settlement competency periods. Settlement rates varied significantly among sites, but spatial variation was relatively consistent between years, suggesting the strong effects of local <span class="hlt">coral</span> assemblages or environmental conditions. Pocilloporidae were the most abundant <span class="hlt">coral</span> spat (83.6%), while Poritidae comprised only 6% of the spat, and Acroporidae <1%. Other, unidentifiable families represented 10% of the <span class="hlt">coral</span> spat. These results indicate that current settlement patterns are reinforcing the local adult assemblage structure ('others'; i.e. sediment-tolerant <span class="hlt">coral</span> taxa) in Singapore, but that the replenishment capacity of Singapore</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSOD34B2512R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSOD34B2512R"><span>Cryptic <span class="hlt">Coral</span> <span class="hlt">Reef</span> Diversity Across the Pacific Assessed using Autonomous <span class="hlt">Reef</span> Monitoring Structures and Multi-omic Methods</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ransome, E. J.; Timmers, M.; Hartmann, A.; Collins, A.; Meyer, C.</p> <p>2016-02-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> harbor diverse and distinct eukaryotic, bacterial and viral communities, which are critically important for their success. The lack of standardized measures for comprehensively assessing <span class="hlt">reef</span> diversity has been a major obstacle in understanding the complexity of eukaryotic and microbial associations, and the processes that drive <span class="hlt">ecosystem</span> shifts on <span class="hlt">reefs</span>. ARMS, which mimic the structural complexity of the <span class="hlt">reef</span> using artificial settlement plates, were used to systematically measure <span class="hlt">reef</span> biodiversity across the Indo-Pacific. This device allows for standardized sampling of <span class="hlt">reef</span> microbes to metazoans, providing the opportunity to investigate the fundamental links between these groups at an <span class="hlt">ecosystem</span> level. We integrate the use of traditional ecology methods with metagenomics and metabolomics (metabolic predictors) to quantify the taxonomic composition of one of the planet's most diverse <span class="hlt">ecosystems</span> and to assess the fundamental links between these cryptic communities and <span class="hlt">ecosystem</span> function along geographical and anthropogenic stress gradients.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19515390','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19515390"><span>Sewage impacts <span class="hlt">coral</span> <span class="hlt">reefs</span> at multiple levels of ecological organization.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Reopanichkul, Pasinee; Schlacher, Thomas A; Carter, R W; Worachananant, Suchai</p> <p>2009-09-01</p> <p>Against a backdrop of rising sea temperatures and ocean acidification which pose global threats to <span class="hlt">coral</span> <span class="hlt">reefs</span>, excess nutrients and turbidity continue to be significant stressors at regional and local scales. Because interventions usually require local data on pollution impacts, we measured ecological responses to sewage discharges in Surin Marine Park, Thailand. Wastewater disposal significantly increased inorganic nutrients and turbidity levels, and this degradation in water quality resulted in substantial ecological shifts in the form of (i) increased macroalgal density and species richness, (ii) lower cover of hard <span class="hlt">corals</span>, and (iii) significant declines in fish abundance. Thus, the effects of nutrient pollution and turbidity can cascade across several levels of ecological organization to change key properties of the benthos and fish on <span class="hlt">coral</span> <span class="hlt">reefs</span>. Maintenance or restoration of ecological <span class="hlt">reef</span> health requires improved wastewater management and run-off control for <span class="hlt">reefs</span> to deliver their valuable <span class="hlt">ecosystems</span> services.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24340025','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24340025"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> habitat response to climate change scenarios.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Freeman, Lauren A; Kleypas, Joan A; Miller, Arthur J</p> <p>2013-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are threatened by both climate change and direct anthropogenic stress. Climate change will alter the physico-chemical environment that <span class="hlt">reefs</span> currently occupy, leaving only limited regions that are conducive to <span class="hlt">reef</span> habitation. Identifying these regions early may aid conservation efforts and inform decisions to transplant particular <span class="hlt">coral</span> species or groups. Here a species distribution model (Maxent) is used to describe habitat suitable for <span class="hlt">coral</span> <span class="hlt">reef</span> growth. Two climate change scenarios (RCP4.5, RCP8.5) from the National Center for Atmospheric Research's Community Earth System Model were used with Maxent to determine environmental suitability for <span class="hlt">corals</span> (order Scleractinia). Environmental input variables best at representing the limits of suitable <span class="hlt">reef</span> growth regions were isolated using a principal component analysis. Climate-driven changes in suitable habitat depend strongly on the unique region of <span class="hlt">reefs</span> used to train Maxent. Increased global habitat loss was predicted in both climate projections through the 21(st) century. A maximum habitat loss of 43% by 2100 was predicted in RCP4.5 and 82% in RCP8.5. When the model is trained solely with environmental data from the Caribbean/Atlantic, 83% of global habitat was lost by 2100 for RCP4.5 and 88% was lost for RCP8.5. Similarly, global runs trained only with Pacific Ocean <span class="hlt">reefs</span> estimated that 60% of suitable habitat would be lost by 2100 in RCP4.5 and 90% in RCP8.5. When Maxent was trained solely with Indian Ocean <span class="hlt">reefs</span>, suitable habitat worldwide increased by 38% in RCP4.5 by 2100 and 28% in RCP8.5 by 2050. Global habitat loss by 2100 was just 10% for RCP8.5. This projection suggests that shallow tropical sites in the Indian Ocean basin experience conditions today that are most similar to future projections of worldwide conditions. Indian Ocean <span class="hlt">reefs</span> may thus be ideal candidate regions from which to select the best strands of <span class="hlt">coral</span> for potential re-seeding efforts.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4208206','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4208206"><span>Water Column Correction for <span class="hlt">Coral</span> <span class="hlt">Reef</span> Studies by Remote Sensing</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Zoffoli, Maria Laura; Frouin, Robert; Kampel, Milton</p> <p>2014-01-01</p> <p>Human activity and natural climate trends constitute a major threat to <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide. Models predict a significant reduction in <span class="hlt">reef</span> spatial extension together with a decline in biodiversity in the relatively near future. In this context, monitoring programs to detect changes in <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are essential. In recent years, <span class="hlt">coral</span> <span class="hlt">reef</span> mapping using remote sensing data has benefited from instruments with better resolution and computational advances in storage and processing capabilities. However, the water column represents an additional complexity when extracting information from submerged substrates by remote sensing that demands a correction of its effect. In this article, the basic concepts of bottom substrate remote sensing and water column interference are presented. A compendium of methodologies developed to reduce water column effects in <span class="hlt">coral</span> <span class="hlt">ecosystems</span> studied by remote sensing that include their salient features, advantages and drawbacks is provided. Finally, algorithms to retrieve the bottom reflectance are applied to simulated data and actual remote sensing imagery and their performance is compared. The available methods are not able to completely eliminate the water column effect, but they can minimize its influence. Choosing the best method depends on the marine environment, available input data and desired outcome or scientific application. PMID:25215941</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012JMS...105...20N','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012JMS...105...20N"><span>Budget of <span class="hlt">coral</span>-derived organic carbon in a fringing <span class="hlt">coral</span> <span class="hlt">reef</span> of the Gulf of Aqaba, Red Sea</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Naumann, Malik S.; Richter, Claudio; Mott, Claudius; el-Zibdah, Mohammad; Manasrah, Riyad; Wild, Christian</p> <p>2012-12-01</p> <p>The continuous release of organic C-rich material by <span class="hlt">reef</span>-building <span class="hlt">corals</span> can contribute substantially to biogeochemical processes and concomitant rapid nutrient recycling in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. However, our current understanding of these processes is limited to platform <span class="hlt">reefs</span> exhibiting a high degree of <span class="hlt">ecosystem</span> closure compared to the globally most common fringing <span class="hlt">reef</span> type. This study carried out in the northern Gulf of Aqaba (Red Sea) presents the first quantitative budget for <span class="hlt">coral</span>-derived organic carbon (COC) in a fringing <span class="hlt">reef</span> and highlights the importance of local hydrodynamics. Diel <span class="hlt">reef</span>-wide COC release amounted to 1.1 ± 0.2 kmol total organic carbon (TOC) representing 1-3% of gross benthic primary production. Most COC (73%) was released as particulate organic C (POC), the bulk of which (34-63%) rapidly settled as mucus string aggregates accounting for approximately 28% of total POC sedimentation. Sedimentation of mucus strings, but also dilution of suspended and dissolved COC in <span class="hlt">reef</span> waters retained 82% of diel COC release in the fringing <span class="hlt">reef</span>, providing a potentially important organic source for a COC-based food web. Pelagic COC degradation represented 0.1-1.6% of pelagic microbial respiration recycling 32% of diel retained COC. Benthic COC degradation contributed substantially (29-47%) to <span class="hlt">reef</span>-wide microbial respiration in <span class="hlt">reef</span> sands, including 20-38% by mucus string POC, and consumed approximately 52% of all retained COC. These findings point out the importance of COC as a C carrier for different <span class="hlt">reef</span> types. COC may further represent a source of organic carbon for faunal communities colonising <span class="hlt">reef</span> framework cavities complementing the efficient retention and recycling of COC within fringing <span class="hlt">reef</span> environments.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22949665','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22949665"><span>Linking habitat mosaics and connectivity in a <span class="hlt">coral</span> <span class="hlt">reef</span> seascape.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>McMahon, Kelton W; Berumen, Michael L; Thorrold, Simon R</p> <p>2012-09-18</p> <p>Tropical marine <span class="hlt">ecosystems</span> are under mounting anthropogenic pressure from overfishing and habitat destruction, leading to declines in their structure and function on a global scale. Although maintaining connectivity among habitats within a seascape is necessary for preserving population resistance and resilience, quantifying movements of individuals within seascapes remains challenging. Traditional methods of identifying and valuing potential <span class="hlt">coral</span> <span class="hlt">reef</span> fish nursery habitats are indirect, often relying on visual surveys of abundance and correlations of size and biomass among habitats. We used compound-specific stable isotope analyses to determine movement patterns of commercially important fish populations within a <span class="hlt">coral</span> <span class="hlt">reef</span> seascape. This approach allowed us to quantify the relative contributions of individuals from inshore nurseries to <span class="hlt">reef</span> populations and identify migration corridors among important habitats. Our results provided direct measurements of remarkable migrations by juvenile snapper of over 30 km, between nurseries and <span class="hlt">reefs</span>. We also found significant plasticity in juvenile nursery residency. Although a majority of individuals on coastal <span class="hlt">reefs</span> had used seagrass nurseries as juveniles, many adults on oceanic <span class="hlt">reefs</span> had settled directly into <span class="hlt">reef</span> habitats. Moreover, seascape configuration played a critical but heretofore unrecognized role in determining connectivity among habitats. Finally, our approach provides key quantitative data necessary to estimate the value of distinctive habitats to <span class="hlt">ecosystem</span> services provided by seascapes.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3484119','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3484119"><span>Predicting the Location and Spatial Extent of Submerged <span class="hlt">Coral</span> <span class="hlt">Reef</span> Habitat in the Great Barrier <span class="hlt">Reef</span> World Heritage Area, Australia</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Bridge, Tom; Beaman, Robin; Done, Terry; Webster, Jody</p> <p>2012-01-01</p> <p>Aim <span class="hlt">Coral</span> <span class="hlt">reef</span> communities occurring in deeper waters have received little research effort compared to their shallow-water counterparts, and even such basic information as their location and extent are currently unknown throughout most of the world. Using the Great Barrier <span class="hlt">Reef</span> as a case study, habitat suitability modelling is used to predict the distribution of deep-water <span class="hlt">coral</span> <span class="hlt">reef</span> communities on the Great Barrier <span class="hlt">Reef</span>, Australia. We test the effectiveness of a range of geophysical and environmental variables for predicting the location of deep-water <span class="hlt">coral</span> <span class="hlt">reef</span> communities on the Great Barrier <span class="hlt">Reef</span>. Location Great Barrier <span class="hlt">Reef</span>, Australia. Methods Maximum entropy modelling is used to identify the spatial extent of two broad communities of habitat-forming megabenthos phototrophs and heterotrophs. Models were generated using combinations of geophysical substrate properties derived from multibeam bathymetry and environmental data derived from Bio-ORACLE, combined with georeferenced occurrence records of mesophotic <span class="hlt">coral</span> communities from autonomous underwater vehicle, remotely operated vehicle and SCUBA surveys. Model results are used to estimate the total amount of mesophotic <span class="hlt">coral</span> <span class="hlt">reef</span> habitat on the GBR. Results Our models predict extensive but previously undocumented <span class="hlt">coral</span> communities occurring both along the continental shelf-edge of the Great Barrier <span class="hlt">Reef</span> and also on submerged <span class="hlt">reefs</span> inside the lagoon. Habitat suitability for phototrophs is highest on submerged <span class="hlt">reefs</span> along the outer-shelf and the deeper flanks of emergent <span class="hlt">reefs</span> inside the GBR lagoon, while suitability for heterotrophs is highest in the deep waters along the shelf-edge. Models using only geophysical variables consistently outperformed models incorporating environmental data for both phototrophs and heterotrophs. Main Conclusion Extensive submerged <span class="hlt">coral</span> <span class="hlt">reef</span> communities that are currently undocumented are likely to occur throughout the Great Barrier <span class="hlt">Reef</span>. High-quality bathymetry data can be used</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26053439','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26053439"><span>Robust Performance of Marginal Pacific <span class="hlt">Coral</span> <span class="hlt">Reef</span> Habitats in Future Climate Scenarios.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Freeman, Lauren A</p> <p>2015-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are under dual threat from climate change. Increasing sea surface temperatures and thermal stress create environmental limits at low latitudes, and decreasing aragonite saturation state creates environmental limits at high latitudes. This study examines the response of unique <span class="hlt">coral</span> <span class="hlt">reef</span> habitats to climate change in the remote Pacific, using the National Center for Atmospheric Research Community Earth System Model version 1 alongside the species distribution algorithm Maxent. Narrow ranges of physico-chemical variables are used to define unique <span class="hlt">coral</span> habitats and their performance is tested in future climate scenarios. General loss of <span class="hlt">coral</span> <span class="hlt">reef</span> habitat is expected in future climate scenarios and has been shown in previous studies. This study found exactly that for most of the predominant physico-chemical environments. However, certain <span class="hlt">coral</span> <span class="hlt">reef</span> habitats considered marginal today at high latitude, along the equator and in the eastern tropical Pacific were found to be quite robust in climate change scenarios. Furthermore, an environmental <span class="hlt">coral</span> <span class="hlt">reef</span> refuge previously identified in the central south Pacific near French Polynesia was further reinforced. Studying the response of specific habitats showed that the prevailing conditions of this refuge during the 20th century shift to a new set of conditions, more characteristic of higher latitude <span class="hlt">coral</span> <span class="hlt">reefs</span> in the 20th century, in future climate scenarios projected to 2100.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26970292','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26970292"><span>The evolution of fishes and <span class="hlt">corals</span> on <span class="hlt">reefs</span>: form, function and interdependence.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bellwood, David R; Goatley, Christopher H R; Bellwood, Orpha</p> <p>2017-05-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are renowned for their spectacular biodiversity and the close links between fishes and <span class="hlt">corals</span>. Despite extensive fossil records and common biogeographic histories, the evolution of these two key groups has rarely been considered together. We therefore examine recent advances in molecular phylogenetics and palaeoecology, and place the evolution of fishes and <span class="hlt">corals</span> in a functional context. In critically reviewing the available fossil and phylogenetic evidence, we reveal a marked congruence in the evolution of the two groups. Despite one group consisting of swimming vertebrates and the other colonial symbiotic invertebrates, fishes and <span class="hlt">corals</span> have remarkably similar evolutionary histories. In the Paleocene and Eocene [66-34 million years ago (Ma)] most modern fish and <span class="hlt">coral</span> families were present, and both were represented by a wide range of functional morphotypes. However, there is little evidence of diversification at this time. By contrast, in the Oligocene and Miocene (34-5.3 Ma), both groups exhibited rapid lineage diversification. There is also evidence of increasing <span class="hlt">reef</span> area, occupation of new habitats, increasing <span class="hlt">coral</span> cover, and potentially, increasing fish abundance. Functionally, the Oligocene-Miocene is marked by the appearance of new fish and <span class="hlt">coral</span> taxa associated with high-turnover fast-growth <span class="hlt">ecosystems</span> and the colonization of <span class="hlt">reef</span> flats. It is in this period that the functional characteristics of modern <span class="hlt">coral</span> <span class="hlt">reefs</span> were established. Most species, however, only arose in the last 5.3 million years (Myr; Plio-Pleistocene), with the average age of fish species being 5.3 Myr, and <span class="hlt">corals</span> just 1.9 Myr. While these species are genetically distinct, phenotypic differences are often limited to variation in colour or minor morphological features. This suggests that the rapid increase in biodiversity during the last 5.3 Myr was not matched by changes in <span class="hlt">ecosystem</span> function. For <span class="hlt">reef</span> fishes, colour appears to be central to recent</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28251798','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28251798"><span>A unified model explains commonness and rarity on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Connolly, Sean R; Hughes, Terry P; Bellwood, David R</p> <p>2017-04-01</p> <p>Abundance patterns in ecological communities have important implications for biodiversity maintenance and <span class="hlt">ecosystem</span> functioning. However, ecological theory has been largely unsuccessful at capturing multiple macroecological abundance patterns simultaneously. Here, we propose a parsimonious model that unifies widespread ecological relationships involving local aggregation, species-abundance distributions, and species associations, and we test this model against the metacommunity structure of <span class="hlt">reef</span>-building <span class="hlt">corals</span> and <span class="hlt">coral</span> <span class="hlt">reef</span> fishes across the western and central Pacific. For both <span class="hlt">corals</span> and fishes, the unified model simultaneously captures extremely well local species-abundance distributions, interspecific variation in the strength of spatial aggregation, patterns of community similarity, species accumulation, and regional species richness, performing far better than alternative models also examined here and in previous work on <span class="hlt">coral</span> <span class="hlt">reefs</span>. Our approach contributes to the development of synthetic theory for large-scale patterns of community structure in nature, and to addressing ongoing challenges in biodiversity conservation at macroecological scales. © 2017 The Authors. Ecology Letters published by CNRS and John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/18722687','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/18722687"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> management and conservation in light of rapidly evolving ecological paradigms.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mumby, Peter J; Steneck, Robert S</p> <p>2008-10-01</p> <p>The decline of many <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> in recent decades surprised experienced managers and researchers. It shattered old paradigms that these diverse <span class="hlt">ecosystems</span> are spatially uniform and temporally stable on the scale of millennia. We now see <span class="hlt">reefs</span> as heterogeneous, fragile, globally stressed <span class="hlt">ecosystems</span> structured by strong positive or negative feedback processes. We review the causes and consequences of <span class="hlt">reef</span> decline and ask whether management practices are addressing the problem at appropriate scales. We conclude that both science and management are currently failing to address the comanagement of extractive activities and ecological processes that drive <span class="hlt">ecosystems</span> (e.g. productivity and herbivory). Most <span class="hlt">reef</span> conservation efforts are directed toward reserve implementation, but new approaches are needed to sustain <span class="hlt">ecosystem</span> function in exploited areas.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012AGUFMGC21E1015W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012AGUFMGC21E1015W"><span>Quantifying and Valuing Potential Climate Change Impacts on <span class="hlt">Coral</span> <span class="hlt">Reefs</span> in the United States</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wobus, C. W.; Lane, D.; Buddemeier, R. W.; Ready, R. C.; Shouse, K. C.; Martinich, J.</p> <p>2012-12-01</p> <p>Global climate change presents a two-pronged threat to <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>: increasing sea surface temperatures will increase the likelihood of episodic bleaching events, while increasing ocean carbon dioxide concentrations will change the carbonate chemistry that drives <span class="hlt">coral</span> growth. Because <span class="hlt">coral</span> <span class="hlt">reefs</span> have important societal as well as ecological benefits, climate change mitigation policies that ameliorate these impacts may create substantial economic value. We present a model that evaluates both the ecological and the economic impacts of climate change on <span class="hlt">coral</span> <span class="hlt">reefs</span> in the United States. We use a <span class="hlt">coral</span> <span class="hlt">reef</span> mortality and bleaching model to project future <span class="hlt">coral</span> <span class="hlt">reef</span> declines under a range of climate change policy scenarios for south Florida, Puerto Rico and Hawaii. Using a benefits transfer approach, the outputs from the physical model are then used to quantify the economic impacts of these <span class="hlt">coral</span> <span class="hlt">reef</span> declines for each of these regions. We find that differing climate change trajectories create substantial changes in projected <span class="hlt">coral</span> cover and value for Hawaii, but that the ecological and economic benefits of more stringent emissions scenarios are less clear for Florida and Puerto Rico. Overall, our results indicate that the effectiveness of climate change mitigation policies may be region-specific, but that these policies could result in a net increase of nearly $10 billion in economic value from <span class="hlt">coral</span> <span class="hlt">reef</span>-related recreational activities alone, over the 21st century.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26969335','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26969335"><span>A Trait-Based Approach to Advance <span class="hlt">Coral</span> <span class="hlt">Reef</span> Science.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Madin, Joshua S; Hoogenboom, Mia O; Connolly, Sean R; Darling, Emily S; Falster, Daniel S; Huang, Danwei; Keith, Sally A; Mizerek, Toni; Pandolfi, John M; Putnam, Hollie M; Baird, Andrew H</p> <p>2016-06-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are biologically diverse and ecologically complex <span class="hlt">ecosystems</span> constructed by stony <span class="hlt">corals</span>. Despite decades of research, basic <span class="hlt">coral</span> population biology and community ecology questions remain. Quantifying trait variation among species can help resolve these questions, but progress has been hampered by a paucity of trait data for the many, often rare, species and by a reliance on nonquantitative approaches. Therefore, we propose filling data gaps by prioritizing traits that are easy to measure, estimating key traits for species with missing data, and identifying 'supertraits' that capture a large amount of variation for a range of biological and ecological processes. Such an approach can accelerate our understanding of <span class="hlt">coral</span> ecology and our ability to protect critically threatened global <span class="hlt">ecosystems</span>. Copyright © 2016 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23959950','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23959950"><span>A <span class="hlt">coral</span> <span class="hlt">reef</span> refuge in the Red Sea.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Fine, Maoz; Gildor, Hezi; Genin, Amatzia</p> <p>2013-12-01</p> <p>The stability and persistence of <span class="hlt">coral</span> <span class="hlt">reefs</span> in the decades to come is uncertain due to global warming and repeated bleaching events that will lead to reduced resilience of these ecological and socio-economically important <span class="hlt">ecosystems</span>. Identifying key refugia is potentially important for future conservation actions. We suggest that the Gulf of Aqaba (GoA) (Red Sea) may serve as a <span class="hlt">reef</span> refugium due to a unique suite of environmental conditions. Our hypothesis is based on experimental detection of an exceptionally high bleaching threshold of northern Red Sea <span class="hlt">corals</span> and on the potential dispersal of <span class="hlt">coral</span> planulae larvae through a selective thermal barrier estimated using an ocean model. We propose that millennia of natural selection in the form of a thermal barrier at the southernmost end of the Red Sea have selected <span class="hlt">coral</span> genotypes that are less susceptible to thermal stress in the northern Red Sea, delaying bleaching events in the GoA by at least a century. © 2013 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28366280','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28366280"><span><span class="hlt">Coral</span> <span class="hlt">reefs</span> as the first line of defense: Shoreline protection in face of climate change.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Elliff, Carla I; Silva, Iracema R</p> <p>2017-06-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are responsible for a wide array of <span class="hlt">ecosystem</span> services including shoreline protection. However, the processes involved in delivering this particular service have not been fully understood. The objective of the present review was to compile the main results in the literature regarding the study of shoreline protection delivered by <span class="hlt">coral</span> <span class="hlt">reefs</span>, identifying the main threats climate change imposes to the service, and discuss mitigation and recovery strategies that can and have been applied to these <span class="hlt">ecosystems</span>. While different zones of a <span class="hlt">reef</span> have been associated with different levels of wave energy and wave height attenuation, more information is still needed regarding the capacity of different <span class="hlt">reef</span> morphologies to deliver shoreline protection. Moreover, the synergy between the main threats imposed by climate change to <span class="hlt">coral</span> <span class="hlt">reefs</span> has also not been thoroughly investigated. Recovery strategies are being tested and while there are numerous mitigation options, the challenge remains as to how to implement them and monitor their efficacy. Copyright © 2017 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFMEP23B0965H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFMEP23B0965H"><span>Linking Wave Forcing to <span class="hlt">Coral</span> Cover and Structural Complexity Across <span class="hlt">Coral</span> <span class="hlt">Reef</span> Flats</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Harris, D. L.; Rovere, A.; Parravicini, V.; Casella, E.</p> <p>2015-12-01</p> <p>The hydrodynamic regime is a significant component in the geomorphic and ecological development of <span class="hlt">coral</span> <span class="hlt">reefs</span>. The energy gradients and flow conditions generated by the breaking and transformation of waves across <span class="hlt">coral</span> <span class="hlt">reef</span> crests and flats drive changes in geomorphic structure, and <span class="hlt">coral</span> growth form and distribution. One of the key aspects in regulating the wave energy propagating across <span class="hlt">reef</span> flats is the rugosity or roughness of the benthic substrate. Rugosity and structural complexity of <span class="hlt">coral</span> <span class="hlt">reefs</span> is also a key indicator of species diversity, ecological functioning, and <span class="hlt">reef</span> health. However, the links between <span class="hlt">reef</span> rugosity, <span class="hlt">coral</span> species distribution and abundance, and hydrodynamic forcing are poorly understood. In this study we examine this relationship by using high resolution measurement of waves in the surf zone and <span class="hlt">coral</span> <span class="hlt">reef</span> benthic structure.Pressure transducers (logging at 4 Hz) were deployed in cross <span class="hlt">reef</span> transects at two sites (Tiahura and Ha'apiti <span class="hlt">reef</span> systems) in Moorea, French Polynesia with wave characteristics determined on a wave by wave basis. A one dimensional hydrodynamic model (XBeach) was calibrated from this data to determine wave processes on the <span class="hlt">reef</span> flats under average conditions. Transects of the <span class="hlt">reef</span> benthic structure were conducted using photographic analysis and the three dimensional <span class="hlt">reef</span> surface was constructed using structure from motion procedures. From this analysis <span class="hlt">reef</span> rugosity, changes in <span class="hlt">coral</span> genus and growth form, and across <span class="hlt">reef</span> shifts in benthic community were determined. The results show clear changes in benthic assemblages along wave energy gradients with some indication of threshold values of wave induced bed shear stress above which live <span class="hlt">coral</span> cover was reduced. <span class="hlt">Reef</span> rugosity was shown to be significantly along the cross-<span class="hlt">reef</span> transect which has important implications for accurate assessment of wave dissipation across <span class="hlt">coral</span> <span class="hlt">reef</span> flats. Links between <span class="hlt">reef</span> rugosity and <span class="hlt">coral</span> genus were also observed and may indicate</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_12");'>12</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li class="active"><span>14</span></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_14 --> <div id="page_15" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li class="active"><span>15</span></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="281"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.osti.gov/biblio/6429729-miocene-reef-corals-review','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/6429729-miocene-reef-corals-review"><span>Miocene <span class="hlt">reef</span> <span class="hlt">corals</span>: A review</span></a></p> <p><a target="_blank" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Frost, S.H.</p> <p>1988-01-01</p> <p>Tectonic blockage in the Middle East of westward-flowing Tethys surface circulation during the latest Oligocene led to creation in the earliest Miocene of endemic Mediterranean, Western Atlantic-Caribbean, and Indo-Pacific realms. A great reduction in <span class="hlt">reef</span> <span class="hlt">coral</span> diversity from 60-80 Oligocene species to 25-35 early Miocene species occurred in the Western Atlantic-Caribbean and Mediterranean areas accompanied by a decrease in <span class="hlt">reef</span> growth. A slower and less drastic change apparently occurred in the Indo-Pacific area. Early Miocene <span class="hlt">reef</span> <span class="hlt">corals</span> of the Western Atlantic-Caribbean comprise a transition between the cosmopolitan Oligocene fauna and its endemic mid-Miocene to modern counterpart. Although early Miocene reefsmore » were dominated by a Porites-Montastrea assemblage, eastward flow of Pacific circulation brought with it ''exotic'' <span class="hlt">corals</span> such as Coscinaraea and Pseudocolumnastrea. Also, many cosmopolitan genera persisted from the Oligocene. During the middle to late Miocene, most of the species still living on Holocene <span class="hlt">reefs</span> evolved. As the Mediterranean basin became more restricted, there was a slow decline in <span class="hlt">reef</span> <span class="hlt">corals</span> from 20 - 25 species in the Aquitainian to less than five species in the Messinian. Eustatic lowstand led to the extinction of <span class="hlt">reef</span>-building <span class="hlt">corals</span> in the late Messinian. In the Indo-Pacific, Neogene evolution of <span class="hlt">reef</span> <span class="hlt">corals</span> was conservative. Excluding the Acroporidae and Seriatoporidae, most Holocene framework species had evolved by the middle Miocene. Interplay between regional tectonics and eustatic sea level changes led to extensive development of middle to late Miocene pinnacle <span class="hlt">reefs</span> over the southwestern Pacific.« less</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014GeoRL..41.5538C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014GeoRL..41.5538C"><span>Enhanced acidification of global <span class="hlt">coral</span> <span class="hlt">reefs</span> driven by regional biogeochemical feedbacks</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Cyronak, Tyler; Schulz, Kai G.; Santos, Isaac R.; Eyre, Bradley D.</p> <p>2014-08-01</p> <p>Physical uptake of anthropogenic CO2 is the dominant driver of ocean acidification (OA) in the open ocean. Due to expected decreases in calcification and increased dissolution of CaCO3 framework, <span class="hlt">coral</span> <span class="hlt">reefs</span> are thought to be highly susceptible to OA. However, biogeochemical processes can influence the pCO2 and pH of coastal <span class="hlt">ecosystems</span> on diel and seasonal time scales, potentially modifying the long-term effects of increasing atmospheric CO2. By compiling data from the literature and removing the effects of short-term variability, we show that the average pCO2 of <span class="hlt">coral</span> <span class="hlt">reefs</span> throughout the globe has increased ~3.5-fold faster than in the open ocean over the past 20 years. This rapid increase in pCO2 has the potential to enhance the acidification and predicted effects of OA on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. A simple model demonstrates that potential drivers of elevated pCO2 include additional anthropogenic disturbances beyond increasing global atmospheric CO2 such as enhanced nutrient and organic matter inputs.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://gcrmn.org/gcrmn-publication/status-and-trends-of-caribbean-coral-reefs-1970-2012/','USGSPUBS'); return false;" href="http://gcrmn.org/gcrmn-publication/status-and-trends-of-caribbean-coral-reefs-1970-2012/"><span>Status and trends of Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span>: 1970-2012</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Jackson, Jeremy; Donovan, Mary; Cramer, Katie; Lam, Vivian</p> <p>2014-01-01</p> <p> vigorously communicate results in simple and straightforward terms to foster more effective conservation and management.This and subsequent reports will focus on separate biogeographic regions in a stepwise fashion and combine all of the results for a global synthesis in the coming years. We began in the wide Caribbean region because the historical data are so extensive and to refine methods of analysis before moving on to other regions. This report documents quantitative trends for Caribbean <span class="hlt">reef</span> <span class="hlt">corals</span>, macroalgae, sea urchins, and fishes based on data from 90 <span class="hlt">reef</span> locations over the past 43 tears. This is the first report to combine all these disparate kinds of data in a single place to explore how the different major components of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> interact on a broadly regional oceanic scale.We obtained data from more than 35,000 ecological surveys carried out by 78 principal investigators (PIs) and some 200 colleagues working in 34 countries, states, and territories throughout the wide Caribbean region. We conducted two workshops in Panama and Brisbane, Australia to bring together people who provided the data to assist in data quality control, analysis, and synthesis. The first workshop at the Smithsonian Tropical Research Institute (STRI) in the Republic of Panama 29 April to 5 May, 2012 included scientists from 18 countries and territories to verify and expand the database and to conduct exploratory analyses of status and trends. Preliminary results based on the Panama workshop were presented to the DC Marine Community and Smithsonian Institution Senate of Scientists in May 2012 and at the International <span class="hlt">Coral</span> <span class="hlt">Reef</span> Symposium (ICRS) and annual ICRI meeting in Cairns, Australia in July 2012. The second workshop in Brisbane, Australia in December 2012 brought together eight <span class="hlt">coral</span> <span class="hlt">reef</span> scientists for more detailed data analysis and organization of results for this report and subsequent publications. Subsequent presentations to solicit comments while the report was</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014BGD....1112895J','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014BGD....1112895J"><span>Evaluation of <span class="hlt">coral</span> <span class="hlt">reef</span> carbonate production models at a global scale</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Jones, N. S.; Ridgwell, A.; Hendy, E. J.</p> <p>2014-09-01</p> <p>Calcification by <span class="hlt">coral</span> <span class="hlt">reef</span> communities is estimated to account for half of all carbonate produced in shallow water environments and more than 25% of the total carbonate buried in marine sediments globally. Production of calcium carbonate by <span class="hlt">coral</span> <span class="hlt">reefs</span> is therefore an important component of the global carbon cycle. It is also threatened by future global warming and other global change pressures. Numerical models of reefal carbonate production are essential for understanding how carbonate deposition responds to environmental conditions including future atmospheric CO2 concentrations, but these models must first be evaluated in terms of their skill in recreating present day calcification rates. Here we evaluate four published model descriptions of <span class="hlt">reef</span> carbonate production in terms of their predictive power, at both local and global scales, by comparing carbonate budget outputs with independent estimates. We also compile available global data on <span class="hlt">reef</span> calcification to produce an observation-based dataset for the model evaluation. The four calcification models are based on functions sensitive to combinations of light availability, aragonite saturation (Ωa) and temperature and were implemented within a specifically-developed global framework, the Global <span class="hlt">Reef</span> Accretion Model (GRAM). None of the four models correlated with independent rate estimates of whole <span class="hlt">reef</span> calcification. The temperature-only based approach was the only model output to significantly correlate with <span class="hlt">coral</span>-calcification rate observations. The absence of any predictive power for whole <span class="hlt">reef</span> systems, even when consistent at the scale of individual <span class="hlt">corals</span>, points to the overriding importance of <span class="hlt">coral</span> cover estimates in the calculations. Our work highlights the need for an <span class="hlt">ecosystem</span> modeling approach, accounting for population dynamics in terms of mortality and recruitment and hence <span class="hlt">coral</span> cover, in estimating global <span class="hlt">reef</span> carbonate budgets. In addition, validation of <span class="hlt">reef</span> carbonate budgets is severely</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27038889','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27038889"><span>Marine protected areas increase resilience among <span class="hlt">coral</span> <span class="hlt">reef</span> communities.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mellin, Camille; Aaron MacNeil, M; Cheal, Alistair J; Emslie, Michael J; Julian Caley, M</p> <p>2016-06-01</p> <p>With marine biodiversity declining globally at accelerating rates, maximising the effectiveness of conservation has become a key goal for local, national and international regulators. Marine protected areas (MPAs) have been widely advocated for conserving and managing marine biodiversity yet, despite extensive research, their benefits for conserving non-target species and wider <span class="hlt">ecosystem</span> functions remain unclear. Here, we demonstrate that MPAs can increase the resilience of <span class="hlt">coral</span> <span class="hlt">reef</span> communities to natural disturbances, including <span class="hlt">coral</span> bleaching, <span class="hlt">coral</span> diseases, Acanthaster planci outbreaks and storms. Using a 20-year time series from Australia's Great Barrier <span class="hlt">Reef</span>, we show that within MPAs, (1) <span class="hlt">reef</span> community composition was 21-38% more stable; (2) the magnitude of disturbance impacts was 30% lower and (3) subsequent recovery was 20% faster that in adjacent unprotected habitats. Our results demonstrate that MPAs can increase the resilience of marine communities to natural disturbance possibly through herbivory, trophic cascades and portfolio effects. © 2016 John Wiley & Sons Ltd/CNRS.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3280131','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3280131"><span>Black <span class="hlt">reefs</span>: iron-induced phase shifts on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Kelly, Linda Wegley; Barott, Katie L; Dinsdale, Elizabeth; Friedlander, Alan M; Nosrat, Bahador; Obura, David; Sala, Enric; Sandin, Stuart A; Smith, Jennifer E; Vermeij, Mark J A; Williams, Gareth J; Willner, Dana; Rohwer, Forest</p> <p>2012-01-01</p> <p>The Line Islands are calcium carbonate <span class="hlt">coral</span> <span class="hlt">reef</span> platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The <span class="hlt">reefs</span> surrounding the shipwreck debris are characterized by high benthic cover of turf algae, macroalgae, cyanobacterial mats and corallimorphs, as well as particulate-laden, cloudy water. These sites also have very low <span class="hlt">coral</span> and crustose coralline algal cover and are call black <span class="hlt">reefs</span> because of the dark-colored benthic community and reduced clarity of the overlying water column. Here we use a combination of benthic surveys, chemistry, metagenomics and microcosms to investigate if and how shipwrecks initiate and maintain black <span class="hlt">reefs</span>. Comparative surveys show that the live <span class="hlt">coral</span> cover was reduced from 40 to 60% to <10% on black <span class="hlt">reefs</span> on Millennium, Tabuaeran and Kingman. These three sites are relatively large (>0.75 km2). The phase shift occurs rapidly; the Kingman black <span class="hlt">reef</span> formed within 3 years of the ship grounding. Iron concentrations in algae tissue from the Millennium black <span class="hlt">reef</span> site were six times higher than in algae collected from reference sites. Metagenomic sequencing of the Millennium Atoll black <span class="hlt">reef</span>-associated microbial community was enriched in iron-associated virulence genes and known pathogens. Microcosm experiments showed that <span class="hlt">corals</span> were killed by black <span class="hlt">reef</span> rubble through microbial activity. Together these results demonstrate that shipwrecks and their associated iron pose significant threats to <span class="hlt">coral</span> <span class="hlt">reefs</span> in iron-limited regions. PMID:21881615</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21881615','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21881615"><span>Black <span class="hlt">reefs</span>: iron-induced phase shifts on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kelly, Linda Wegley; Barott, Katie L; Dinsdale, Elizabeth; Friedlander, Alan M; Nosrat, Bahador; Obura, David; Sala, Enric; Sandin, Stuart A; Smith, Jennifer E; Vermeij, Mark J A; Williams, Gareth J; Willner, Dana; Rohwer, Forest</p> <p>2012-03-01</p> <p>The Line Islands are calcium carbonate <span class="hlt">coral</span> <span class="hlt">reef</span> platforms located in iron-poor regions of the central Pacific. Natural terrestrial run-off of iron is non-existent and aerial deposition is extremely low. However, a number of ship groundings have occurred on these atolls. The <span class="hlt">reefs</span> surrounding the shipwreck debris are characterized by high benthic cover of turf algae, macroalgae, cyanobacterial mats and corallimorphs, as well as particulate-laden, cloudy water. These sites also have very low <span class="hlt">coral</span> and crustose coralline algal cover and are call black <span class="hlt">reefs</span> because of the dark-colored benthic community and reduced clarity of the overlying water column. Here we use a combination of benthic surveys, chemistry, metagenomics and microcosms to investigate if and how shipwrecks initiate and maintain black <span class="hlt">reefs</span>. Comparative surveys show that the live <span class="hlt">coral</span> cover was reduced from 40 to 60% to <10% on black <span class="hlt">reefs</span> on Millennium, Tabuaeran and Kingman. These three sites are relatively large (>0.75 km(2)). The phase shift occurs rapidly; the Kingman black <span class="hlt">reef</span> formed within 3 years of the ship grounding. Iron concentrations in algae tissue from the Millennium black <span class="hlt">reef</span> site were six times higher than in algae collected from reference sites. Metagenomic sequencing of the Millennium Atoll black <span class="hlt">reef</span>-associated microbial community was enriched in iron-associated virulence genes and known pathogens. Microcosm experiments showed that <span class="hlt">corals</span> were killed by black <span class="hlt">reef</span> rubble through microbial activity. Together these results demonstrate that shipwrecks and their associated iron pose significant threats to <span class="hlt">coral</span> <span class="hlt">reefs</span> in iron-limited regions.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4182679','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4182679"><span>Persistence and Change in Community Composition of <span class="hlt">Reef</span> <span class="hlt">Corals</span> through Present, Past, and Future Climates</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Edmunds, Peter J.; Adjeroud, Mehdi; Baskett, Marissa L.; Baums, Iliana B.; Budd, Ann F.; Carpenter, Robert C.; Fabina, Nicholas S.; Fan, Tung-Yung; Franklin, Erik C.; Gross, Kevin; Han, Xueying; Jacobson, Lianne; Klaus, James S.; McClanahan, Tim R.; O'Leary, Jennifer K.; van Oppen, Madeleine J. H.; Pochon, Xavier; Putnam, Hollie M.; Smith, Tyler B.; Stat, Michael; Sweatman, Hugh; van Woesik, Robert; Gates, Ruth D.</p> <p>2014-01-01</p> <p>The reduction in <span class="hlt">coral</span> cover on many contemporary tropical <span class="hlt">reefs</span> suggests a different set of <span class="hlt">coral</span> community assemblages will dominate future <span class="hlt">reefs</span>. To evaluate the capacity of <span class="hlt">reef</span> <span class="hlt">corals</span> to persist over various time scales, we examined <span class="hlt">coral</span> community dynamics in contemporary, fossil, and simulated future <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Based on studies between 1987 and 2012 at two locations in the Caribbean, and between 1981 and 2013 at five locations in the Indo-Pacific, we show that many <span class="hlt">coral</span> genera declined in abundance, some showed no change in abundance, and a few <span class="hlt">coral</span> genera increased in abundance. Whether the abundance of a genus declined, increased, or was conserved, was independent of <span class="hlt">coral</span> family. An analysis of fossil-<span class="hlt">reef</span> communities in the Caribbean revealed changes in numerical dominance and relative abundances of <span class="hlt">coral</span> genera, and demonstrated that neither dominance nor taxon was associated with persistence. As <span class="hlt">coral</span> family was a poor predictor of performance on contemporary <span class="hlt">reefs</span>, a trait-based, dynamic, multi-patch model was developed to explore the phenotypic basis of ecological performance in a warmer future. Sensitivity analyses revealed that upon exposure to thermal stress, thermal tolerance, growth rate, and longevity were the most important predictors of <span class="hlt">coral</span> persistence. Together, our results underscore the high variation in the rates and direction of change in <span class="hlt">coral</span> abundances on contemporary and fossil <span class="hlt">reefs</span>. Given this variation, it remains possible that <span class="hlt">coral</span> <span class="hlt">reefs</span> will be populated by a subset of the present <span class="hlt">coral</span> fauna in a future that is warmer than the recent past. PMID:25272143</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3799737','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3799737"><span>Environmental Records from Great Barrier <span class="hlt">Reef</span> <span class="hlt">Corals</span>: Inshore versus Offshore Drivers</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Walther, Benjamin D.; Kingsford, Michael J.; McCulloch, Malcolm T.</p> <p>2013-01-01</p> <p>The biogenic structures of stationary organisms can be effective recorders of environmental fluctuations. These proxy records of environmental change are preserved as geochemical signals in the carbonate skeletons of scleractinian <span class="hlt">corals</span> and are useful for reconstructions of temporal and spatial fluctuations in the physical and chemical environments of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, including The Great Barrier <span class="hlt">Reef</span> (GBR). We compared multi-year monitoring of water temperature and dissolved elements with analyses of chemical proxies recorded in Porites <span class="hlt">coral</span> skeletons to identify the divergent mechanisms driving environmental variation at inshore versus offshore <span class="hlt">reefs</span>. At inshore <span class="hlt">reefs</span>, water Ba/Ca increased with the onset of monsoonal rains each year, indicating a dominant control of flooding on inshore ambient chemistry. Inshore multi-decadal records of <span class="hlt">coral</span> Ba/Ca were also highly periodic in response to flood-driven pulses of terrigenous material. In contrast, an offshore <span class="hlt">reef</span> at the edge of the continental shelf was subject to annual upwelling of waters that were presumed to be richer in Ba during summer months. Regular pulses of deep cold water were delivered to the <span class="hlt">reef</span> as indicated by in situ temperature loggers and <span class="hlt">coral</span> Ba/Ca. Our results indicate that although much of the GBR is subject to periodic environmental fluctuations, the mechanisms driving variation depend on proximity to the coast. Inshore <span class="hlt">reefs</span> are primarily influenced by variable freshwater delivery and terrigenous erosion of catchments, while offshore <span class="hlt">reefs</span> are dominated by seasonal and inter-annual variations in oceanographic conditions that influence the propensity for upwelling. The careful choice of sites can help distinguish between the various factors that promote Ba uptake in <span class="hlt">corals</span> and therefore increase the utility of <span class="hlt">corals</span> as monitors of spatial and temporal variation in environmental conditions. PMID:24204743</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/18663220','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/18663220"><span>Poorly cemented <span class="hlt">coral</span> <span class="hlt">reefs</span> of the eastern tropical Pacific: possible insights into <span class="hlt">reef</span> development in a high-CO2 world.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Manzello, Derek P; Kleypas, Joan A; Budd, David A; Eakin, C Mark; Glynn, Peter W; Langdon, Chris</p> <p>2008-07-29</p> <p>Ocean acidification describes the progressive, global reduction in seawater pH that is currently underway because of the accelerating oceanic uptake of atmospheric CO(2). Acidification is expected to reduce <span class="hlt">coral</span> <span class="hlt">reef</span> calcification and increase <span class="hlt">reef</span> dissolution. Inorganic cementation in <span class="hlt">reefs</span> describes the precipitation of CaCO(3) that acts to bind framework components and occlude porosity. Little is known about the effects of ocean acidification on <span class="hlt">reef</span> cementation and whether changes in cementation rates will affect <span class="hlt">reef</span> resistance to erosion. <span class="hlt">Coral</span> <span class="hlt">reefs</span> of the eastern tropical Pacific (ETP) are poorly developed and subject to rapid bioerosion. Upwelling processes mix cool, subthermocline waters with elevated pCO(2) (the partial pressure of CO(2)) and nutrients into the surface layers throughout the ETP. Concerns about ocean acidification have led to the suggestion that this region of naturally low pH waters may serve as a model of <span class="hlt">coral</span> <span class="hlt">reef</span> development in a high-CO(2) world. We analyzed seawater chemistry and <span class="hlt">reef</span> framework samples from multiple <span class="hlt">reef</span> sites in the ETP and found that a low carbonate saturation state (Omega) and trace abundances of cement are characteristic of these <span class="hlt">reefs</span>. These low cement abundances may be a factor in the high bioerosion rates previously reported for ETP <span class="hlt">reefs</span>, although elevated nutrients in upwelled waters may also be limiting cementation and/or stimulating bioerosion. ETP <span class="hlt">reefs</span> represent a real-world example of <span class="hlt">coral</span> <span class="hlt">reef</span> growth in low-Omega waters that provide insights into how the biological-geological interface of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> will change in a high-CO(2) world.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017JGRC..122.7218M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017JGRC..122.7218M"><span>Nitrogen enrichment and speciation in a <span class="hlt">coral</span> <span class="hlt">reef</span> lagoon driven by groundwater inputs of bird guano</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>McMahon, Ashly; Santos, Isaac R.</p> <p>2017-09-01</p> <p>While the influence of river inputs on <span class="hlt">coral</span> <span class="hlt">reef</span> biogeochemistry has been investigated, there is limited information on nutrient fluxes related to submarine groundwater discharge (SGD). Here, we investigate whether significant saline groundwater-derived nutrient inputs from bird guano drive <span class="hlt">coral</span> <span class="hlt">reef</span> photosynthesis and calcification off Heron Island (Great Barrier <span class="hlt">Reef</span>, Australia). We used multiple experimental approaches including groundwater sampling, beach face transects, and detailed time series observations to assess the dynamics and speciation of groundwater nutrients as they travel across the island and discharge into the <span class="hlt">coral</span> <span class="hlt">reef</span> lagoon. Nitrogen speciation shifted from nitrate-dominated groundwater (>90% of total dissolved nitrogen) to a <span class="hlt">coral</span> <span class="hlt">reef</span> lagoon dominated by dissolved organic nitrogen (DON; ˜86%). There was a minimum input of nitrate of 2.1 mmol m-2 d-1 into the lagoon from tidally driven submarine groundwater discharge estimated from a radon mass balance model. An independent approach based on the enrichment of dissolved nutrients during isolation at low tide implied nitrate fluxes of 5.4 mmol m-2 d-1. A correlation was observed between nitrate and daytime net <span class="hlt">ecosystem</span> production and calcification. We suggest that groundwater nutrients derived from bird guano may offer a significant addition to oligotrophic <span class="hlt">coral</span> <span class="hlt">reef</span> lagoons and fuel <span class="hlt">ecosystem</span> productivity and the coastal carbon cycle near Heron Island. The large input of groundwater nutrients in Heron Island may serve as a natural ecological analogue to other <span class="hlt">coral</span> <span class="hlt">reefs</span> subject to large nutrient inputs from anthropogenic sources.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017ISPAr42W3..127B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017ISPAr42W3..127B"><span>Comparison of Commercial Structure-From Photogrammety Software Used for Underwater Three-Dimensional Modeling of <span class="hlt">Coral</span> <span class="hlt">Reef</span> Environments</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Burns, J. H. R.; Delparte, D.</p> <p>2017-02-01</p> <p>Structural complexity in <span class="hlt">ecosystems</span> creates an assortment of microhabitat types and has been shown to support greater diversity and abundance of associated organisms. The 3D structure of an environment also directly affects important ecological parameters such as habitat provisioning and light availability and can therefore strongly influence <span class="hlt">ecosystem</span> function. <span class="hlt">Coral</span> <span class="hlt">reefs</span> are architecturally complex 3D habitats, whose structure is intrinsically linked to the <span class="hlt">ecosystem</span> biodiversity, productivity, and function. The field of <span class="hlt">coral</span> ecology has, however, been primarily limited to using 2-dimensional (2D) planar survey techniques for studying the physical structure of <span class="hlt">reefs</span>. This conventional approach fails to capture or quantify the intricate structural complexity of <span class="hlt">corals</span> that influences habitat facilitation and biodiversity. A 3-dimensional (3D) approach can obtain accurate measurements of architectural complexity, topography, rugosity, volume, and other structural characteristics that affect biodiversity and abundance of <span class="hlt">reef</span> organisms. Structurefrom- Motion (SfM) photogrammetry is an emerging computer vision technology that provides a simple and cost-effective method for 3D reconstruction of natural environments. SfM has been used in several studies to investigate the relationship between habitat complexity and ecological processes in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. This study compared two commercial SfM software packages, Agisoft Photoscan Pro and Pix4Dmapper Pro 3.1, in order to assess the cpaability and spatial accuracy of these programs for conducting 3D modeling of <span class="hlt">coral</span> <span class="hlt">reef</span> habitats at three spatial scales.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018CorRe..37..121K','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018CorRe..37..121K"><span>Acoustic and biological trends on <span class="hlt">coral</span> <span class="hlt">reefs</span> off Maui, Hawaii</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Kaplan, Maxwell B.; Lammers, Marc O.; Zang, Eden; Aran Mooney, T.</p> <p>2018-03-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are characterized by high biodiversity, and evidence suggests that <span class="hlt">reef</span> soundscapes reflect local species assemblages. To investigate how sounds produced on a given <span class="hlt">reef</span> relate to abiotic and biotic parameters and how that relationship may change over time, an observational study was conducted between September 2014 and January 2016 at seven Hawaiian <span class="hlt">reefs</span> that varied in <span class="hlt">coral</span> cover, rugosity, and fish assemblages. The <span class="hlt">reefs</span> were equipped with temperature loggers and acoustic recording devices that recorded on a 10% duty cycle. Benthic and fish visual survey data were collected four times over the course of the study. On average, <span class="hlt">reefs</span> ranged from 0 to 80% live <span class="hlt">coral</span> cover, although changes between surveys were noted, in particular during the major El Niño-related bleaching event of October 2015. Acoustic analyses focused on two frequency bands (50-1200 and 1.8-20.5 kHz) that corresponded to the dominant spectral features of the major sound-producing taxa on these <span class="hlt">reefs</span>, fish, and snapping shrimp, respectively. In the low-frequency band, the presence of humpback whales (December-May) was a major contributor to sound level, whereas in the high-frequency band sound level closely tracked water temperature. On shorter timescales, the magnitude of the diel trend in sound production was greater than that of the lunar trend, but both varied in strength among <span class="hlt">reefs</span>, which may reflect differences in the species assemblages present. Results indicated that the magnitude of the diel trend was related to fish densities at low frequencies and <span class="hlt">coral</span> cover at high frequencies; however, the strength of these relationships varied by season. Thus, long-term acoustic recordings capture the substantial acoustic variability present in <span class="hlt">coral-reef</span> <span class="hlt">ecosystems</span> and provide insight into the presence and relative abundance of sound-producing organisms.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSME14D0641K','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSME14D0641K"><span>A Biophysical Model for Hawaiian <span class="hlt">Coral</span> <span class="hlt">Reefs</span>: Coupling Local Ecology, Larval Transport and Climate Change</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Kapur, M. R.</p> <p>2016-02-01</p> <p>Simulative models of <span class="hlt">reef</span> <span class="hlt">ecosystems</span> have been used to evaluate ecological responses to a myriad of disturbance events, including fishing pressure, <span class="hlt">coral</span> bleaching, invasion by alien species, and nutrient loading. The <span class="hlt">Coral</span> <span class="hlt">Reef</span> Scenario Evaluation Tool (CORSET), has been developed and instantiated for both the Meso-American <span class="hlt">Reef</span> (MAR) and South China Sea (SCS) regions. This model is novel in that it accounts for the many scales at which <span class="hlt">reef</span> <span class="hlt">ecosystem</span> processes take place; is comprised of a "bottom-up" structure wherein complex behaviors are not pre-programmed, but emergent and highly portable to new systems. Local-scale dynamics are coupled across regions through larval connectivity matrices, derived sophisticated particle transport simulations that include key elements of larval behavior. By this approach, we are able to directly evaluate some of the potential consequences of larval connectivity patterns across a range of spatial scales and under multiple climate scenarios. This work develops and applies the CORSET (<span class="hlt">Coral</span> <span class="hlt">Reef</span> Scenario Evaluation Tool) to the Main Hawaiian Islands under a suite of climate and ecological scenarios. We introduce an adaptation constant into <span class="hlt">reef</span>-building <span class="hlt">coral</span> dynamics to simulate observed resiliencies to bleaching events. This presentation will share results from the model's instantiation under two Resource Concentration Pathway climate scenarios, with emphasis upon larval connectivity dynamics, emergent <span class="hlt">coral</span> tolerance to increasing thermal anomalies, and patterns of spatial fishing closures. Results suggest that under a business-as-usual scenario, thermal tolerance and herbivore removal will have synergistic effects on <span class="hlt">reef</span> resilience.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUFMOS54A..06S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUFMOS54A..06S"><span>Processes Driving Natural Acidification of Western Pacific <span class="hlt">Coral</span> <span class="hlt">Reef</span> Waters</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Shamberger, K. E.; Cohen, A. L.; Golbuu, Y.; McCorkle, D. C.; Lentz, S. J.; Barkley, H. C.</p> <p>2013-12-01</p> <p>Rising levels of atmospheric carbon dioxide (CO2) are acidifying the oceans, reducing seawater pH, aragonite saturation state (Ωar) and the availability of carbonate ions (CO32-) that calcifying organisms use to build <span class="hlt">coral</span> <span class="hlt">reefs</span>. Today's most extensive <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are located where open ocean CO32- concentration ([CO32-]) and Ωar exceed 200 μmol kg-1 and 3.3, respectively. However, high rates of biogeochemical cycling and long residence times of water can result in carbonate chemistry conditions within <span class="hlt">coral</span> <span class="hlt">reef</span> systems that differ greatly from those of nearby open ocean waters. In the Palauan archipelago, water moving across the <span class="hlt">reef</span> platform is altered by both biological and hydrographic processes that combine to produce seawater pH, Ωar, [CO32-] significantly lower than that of open ocean source water. Just inshore of the barrier <span class="hlt">reefs</span>, average Ωar values are 0.2 to 0.3 and pH values are 0.02 to 0.03 lower than they are offshore, declining further as water moves across the back <span class="hlt">reef</span>, lagoon and into the meandering bays and inlets that characterize the Rock Islands. In the Rock Island bays, <span class="hlt">coral</span> communities inhabit seawater with average Ωar values of 2.7 or less, and as low as 1.9. Levels of Ωar as low as these are not predicted to occur in the western tropical Pacific open ocean until near the end of the century. Calcification by <span class="hlt">coral</span> <span class="hlt">reef</span> organisms is the principal biological process responsible for lowering Ωar and pH, accounting for 68 - 99 % of the difference in Ωar between offshore source water and <span class="hlt">reef</span> water at our sites. However, in the Rock Island bays where Ωar is lowest, CO2 production by net respiration contributes between 17 - 30 % of the difference in Ωar between offshore source water and <span class="hlt">reef</span> water. Furthermore, the residence time of seawater in the Rock Island bays is much longer than at the well flushed exposed sites, enabling calcification and respiration to drive Ωar to very low levels despite lower net <span class="hlt">ecosystem</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017CorRe..36.1003M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017CorRe..36.1003M"><span>Embracing a world of subtlety and nuance on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Mumby, Peter J.</p> <p>2017-09-01</p> <p>Climate change will homogenise the environment and generate a preponderance of mediocre <span class="hlt">reefs</span>. Managing seascapes of mediocrity will be challenging because our science is ill prepared to deal with the `shades of grey' of <span class="hlt">reef</span> health; we tend to study natural processes in the healthiest <span class="hlt">reefs</span> available. Yet much can be gained by examining the drivers and implications of even subtle changes in <span class="hlt">reef</span> state. Where strong ecological interactions are discovered, even small changes in abundance can have profound impacts on <span class="hlt">coral</span> resilience. Indeed, if we are to develop effective early warnings of critical losses of resilience, then monitoring must place greater emphasis on measuring and interpreting changes in <span class="hlt">reef</span> recovery rates. In terms of mechanism, a more nuanced approach is needed to explore the generality of what might be considered `dogma'. A more nuanced approach to science will serve managers needs well and help minimise the rise of mediocrity in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016Natur.531..314L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016Natur.531..314L"><span><span class="hlt">Coral</span> <span class="hlt">reefs</span>: Turning back time</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Lough, Janice M.</p> <p>2016-03-01</p> <p>An in situ experiment finds that reducing the acidity of the seawater surrounding a natural <span class="hlt">coral</span> <span class="hlt">reef</span> significantly increases <span class="hlt">reef</span> calcification, suggesting that ocean acidification may already be slowing <span class="hlt">coral</span> growth. See Letter p.362</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=176428&Lab=NCEA&keyword=tourism&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=176428&Lab=NCEA&keyword=tourism&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>PROTECTING A NATIONAL TREASURE: A <span class="hlt">REEF</span> MANAGER’S GUIDE TO <span class="hlt">CORAL</span> BLEACHING</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p><p><span class="hlt">Coral</span> <span class="hlt">reefs</span> form the foundation for multi-million dollar industries. Many coastal communities rely on them for eco-tourism, fishing, and shoreline protection from erosion and storm damage. Also, they are the backbone to an entire <span class="hlt">ecosystem</span>. <span class="hlt">Corals</span> are primary producers and s...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70125377','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70125377"><span>Hurricanes, <span class="hlt">coral</span> <span class="hlt">reefs</span> and rainforests: resistance, ruin and recovery in the Caribbean</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Lugo, Ariel E.; Rogers, Caroline S.; Nixon, Scott W.</p> <p>2000-01-01</p> <p>The coexistence of hurricanes, <span class="hlt">coral</span> <span class="hlt">reefs</span>, and rainforests in the Caribbean demonstrates that highly structured <span class="hlt">ecosystems</span> with great diversity can flourish in spite of recurring exposure to intense destructive energy. <span class="hlt">Coral</span> <span class="hlt">reefs</span> develop in response to wave energy and resist hurricanes largely by virtue of their structural strength. Limited fetch also protects some <span class="hlt">reefs</span> from fully developed hurricane waves. While storms may produce dramatic local <span class="hlt">reef</span> damage, they appear to have little impact on the ability of <span class="hlt">coral</span> <span class="hlt">reefs</span> to provide food or habitat for fish and other animals. Rainforests experience an enormous increase in wind energy during hurricanes with dramatic structural changes in the vegetation. The resulting changes in forest microclimate are larger than those on <span class="hlt">reefs</span> and the loss of fruit, leaves, cover, and microclimate has a great impact on animal populations. Recovery of many aspects of rainforest structure and function is rapid, though there may be long-term changes in species composition. While resistance and repair have maintained <span class="hlt">reefs</span> and rainforests in the past, human impacts may threaten their ability to survive.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUFMGC11D1167H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUFMGC11D1167H"><span>Healthy <span class="hlt">coral</span> <span class="hlt">reefs</span> may assure coastal protection in face of climate change related sea level rise</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Harris, D. L.; Rovere, A.; Parravicini, V.; Casella, E.; Canavesio, R.; Collin, A.</p> <p>2016-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are diverse <span class="hlt">ecosystems</span> that support millions of people worldwide providing crucial services, of which, coastal protection is one of the most relevant. The efficiency of <span class="hlt">coral</span> <span class="hlt">reefs</span> in protecting coastlines and dissipating waves is directly linked to the cover of living <span class="hlt">corals</span> and three dimensional <span class="hlt">reef</span> structural complexity. Climate change and human impacts are leading to severe global reductions in live <span class="hlt">coral</span> cover, posing serious concerns regarding the capacity of degraded <span class="hlt">reef</span> systems in protecting tropical coastal regions. Although it is known that the loss of structurally complex <span class="hlt">reefs</span> may lead to greater erosion of coastlines, this process has rarely been quantified and it is still unknown whether the maintenance of healthy <span class="hlt">reefs</span> through conservation will be enough to guarantee coastal protection during rising sea levels. We show that a significant loss of wave dissipation and a subsequent increase in back-<span class="hlt">reef</span> wave height (up to 5 times present wave height) could occur even at present sea level if living <span class="hlt">corals</span> are lost and <span class="hlt">reef</span> structural complexity is reduced. Yet we also show that healthy <span class="hlt">reefs</span>, measured by structural complexity and efficiency of vertical <span class="hlt">reef</span> accretion, may maintain their present capacity of wave dissipation even under rising sea levels. Our results indicate that the health of <span class="hlt">coral</span> <span class="hlt">reefs</span> and not sea level rise will be the major determinant of the coastal protection services provided by <span class="hlt">coral</span> <span class="hlt">reefs</span> and calls for investments into <span class="hlt">coral</span> <span class="hlt">reef</span> conservation to ensure the future protection of tropical coastal communities.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_13");'>13</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li class="active"><span>15</span></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_15 --> <div id="page_16" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li class="active"><span>16</span></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="301"> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012AGUFMOS53C1997R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012AGUFMOS53C1997R"><span>Changing carbonate chemistry in ocean waters surrounding <span class="hlt">coral</span> <span class="hlt">reefs</span> in the CMIP5 ensemble</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Ricke, K.; Schneider, K.; Cao, L.; Caldeira, K.</p> <p>2012-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> comprise some of the most biodiverse <span class="hlt">ecosystems</span> in the world. Today they are threatened by a number of stressors, including pollution, bleaching from global warming and ocean acidification. In this study, we focus on the implications of ocean acidification for the open ocean chemistry surrounding <span class="hlt">coral</span> <span class="hlt">reefs</span>. We use results from 13 Earth System Models included in the Coupled Model Intercomparison Project 5 (CMIP5) to examine the changing aragonite saturations (Ωa) of open ocean waters surrounding approximately 6,000 <span class="hlt">coral</span> <span class="hlt">reefs</span>. These 13 Earth System Models participating in CMIP5 each have interactive ocean biogeochemistry models that output state variables including DIC, alkalinity, SST, and salinity. Variation in these values were combined with values from the GLODAP database to calculate aragonite, the form of calcium carbonate that <span class="hlt">corals</span> use to make their skeletons. We used <span class="hlt">reef</span> locations from <span class="hlt">Reef</span>Base that were within one degree (in latitude or longitude) of water masses represented both in the GLODAP database and in the climate models. Carbonate chemistry calculations were performed by Dr. James C. Orr (IPSL) as part of a separate study. We find that in preindustrial times, 99.9 % of <span class="hlt">coral</span> <span class="hlt">reefs</span> were located in regions of the ocean with aragonite saturations of 3.5 or more. The saturation threshold for viable <span class="hlt">reef</span> <span class="hlt">ecosystems</span> in uncertain, but the pre-industrial distribution of water chemistry surrounding <span class="hlt">coral</span> <span class="hlt">reefs</span> may nevertheless provide some indication of viability. We examine the fate of <span class="hlt">coral</span> <span class="hlt">reefs</span> in the context of several potential aragonite saturation thresholds, i.e., when Ωa_crit equals 3, 3.25, or 3.5. We show that under a business-as-usual scenario Representative Concentration Pathway (RCP) 8.5, the specific value of Ωa_crit does not affect the long-term fate of <span class="hlt">coral</span> <span class="hlt">reefs</span> -- by the end of the 21st century, no <span class="hlt">coral</span> <span class="hlt">reef</span> considered is surrounded by water with Ωa> 3. However, under scenarios with significant CO2 emissions</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=199785&keyword=coral+AND+reef&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=199785&keyword=coral+AND+reef&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Biological Criteria for Protection of U.S. <span class="hlt">Coral</span> <span class="hlt">Reefs</span>.</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are threatened by natural stressors, human activities, and natural stressors exacerbated by human activities. Under the U.S. Clean Water Act, States and Territories may guard against anthropogenic threats by adopting water quality standards based on biologic...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=308777&keyword=coral+AND+reef&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=308777&keyword=coral+AND+reef&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Biological Criteria for Protection of U.S. <span class="hlt">Coral</span> <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are threatened by natural stressors, human activities, and natural stressors exacerbated by human activities. Under the U.S. Clean Water Act, States and Territories may guard against anthropogenic threats by adopting water quality standards based on biologic...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4345611','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4345611"><span>Building <span class="hlt">coral</span> <span class="hlt">reef</span> resilience through assisted evolution</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>van Oppen, Madeleine J. H.; Oliver, James K.; Putnam, Hollie M.; Gates, Ruth D.</p> <p>2015-01-01</p> <p>The genetic enhancement of wild animals and plants for characteristics that benefit human populations has been practiced for thousands of years, resulting in impressive improvements in commercially valuable species. Despite these benefits, genetic manipulations are rarely considered for noncommercial purposes, such as conservation and restoration initiatives. Over the last century, humans have driven global climate change through industrialization and the release of increasing amounts of CO2, resulting in shifts in ocean temperature, ocean chemistry, and sea level, as well as increasing frequency of storms, all of which can profoundly impact marine <span class="hlt">ecosystems</span>. <span class="hlt">Coral</span> <span class="hlt">reefs</span> are highly diverse <span class="hlt">ecosystems</span> that have suffered massive declines in health and abundance as a result of these and other direct anthropogenic disturbances. There is great concern that the high rates, magnitudes, and complexity of environmental change are overwhelming the intrinsic capacity of <span class="hlt">corals</span> to adapt and survive. Although it is important to address the root causes of changing climate, it is also prudent to explore the potential to augment the capacity of <span class="hlt">reef</span> organisms to tolerate stress and to facilitate recovery after disturbances. Here, we review the risks and benefits of the improvement of natural and commercial stocks in noncoral <span class="hlt">reef</span> systems and advocate a series of experiments to determine the feasibility of developing <span class="hlt">coral</span> stocks with enhanced stress tolerance through the acceleration of naturally occurring processes, an approach known as (human)-assisted evolution, while at the same time initiating a public dialogue on the risks and benefits of this approach. PMID:25646461</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4981706','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4981706"><span>The Microbial Signature Provides Insight into the Mechanistic Basis of <span class="hlt">Coral</span> Success across <span class="hlt">Reef</span> Habitats</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Leggat, William; Bongaerts, Pim</p> <p>2016-01-01</p> <p>ABSTRACT For <span class="hlt">ecosystems</span> vulnerable to environmental change, understanding the spatiotemporal stability of functionally crucial symbioses is fundamental to determining the mechanisms by which these <span class="hlt">ecosystems</span> may persist. The <span class="hlt">coral</span> Pachyseris speciosa is a successful environmental generalist that succeeds in diverse <span class="hlt">reef</span> habitats. The generalist nature of this <span class="hlt">coral</span> suggests it may have the capacity to form functionally significant microbial partnerships to facilitate access to a range of nutritional sources within different habitats. Here, we propose that <span class="hlt">coral</span> is a metaorganism hosting three functionally distinct microbial interactions: a ubiquitous core microbiome of very few symbiotic host-selected bacteria, a microbiome of spatially and/or regionally explicit core microbes filling functional niches (<100 phylotypes), and a highly variable bacterial community that is responsive to biotic and abiotic processes across spatial and temporal scales (>100,000 phylotypes). We find that this <span class="hlt">coral</span> hosts upwards of 170,000 distinct phylotypes and provide evidence for the persistence of a select group of bacteria in <span class="hlt">corals</span> across environmental habitats of the Great Barrier <span class="hlt">Reef</span> and <span class="hlt">Coral</span> Sea. We further show that a higher number of bacteria are consistently associated with <span class="hlt">corals</span> on mesophotic <span class="hlt">reefs</span> than on shallow <span class="hlt">reefs</span>. An increase in microbial diversity with depth suggests reliance by this <span class="hlt">coral</span> on bacteria for nutrient acquisition on <span class="hlt">reefs</span> exposed to nutrient upwelling. Understanding the complex microbial communities of host organisms across broad biotic and abiotic environments as functionally distinct microbiomes can provide insight into those interactions that are ubiquitous niche symbioses and those that provide competitive advantage within the hosts’ environment. PMID:27460792</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28122006','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28122006"><span>Small Marine Protected Areas in Fiji Provide Refuge for <span class="hlt">Reef</span> Fish Assemblages, Feeding Groups, and <span class="hlt">Corals</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bonaldo, Roberta M; Pires, Mathias M; Guimarães, Paulo Roberto; Hoey, Andrew S; Hay, Mark E</p> <p>2017-01-01</p> <p>The establishment of no-take marine protected areas (MPAs) on <span class="hlt">coral</span> <span class="hlt">reefs</span> is a common management strategy for conserving the diversity, abundance, and biomass of <span class="hlt">reef</span> organisms. Generally, well-managed and enforced MPAs can increase or maintain the diversity and function of the enclosed <span class="hlt">coral</span> <span class="hlt">reef</span>, with some of the benefits extending to adjacent non-protected <span class="hlt">reefs</span>. A fundamental question in <span class="hlt">coral</span> <span class="hlt">reef</span> conservation is whether these benefits arise within small MPAs (<1 km2), because larval input of <span class="hlt">reef</span> organisms is largely decoupled from local adult reproduction. We examined the structure of fish assemblages, composition of fish feeding groups, benthic cover, and key <span class="hlt">ecosystem</span> processes (grazing, macroalgal browsing, and <span class="hlt">coral</span> replenishment) in three small (0.5-0.8 km2) no-take MPAs and adjacent areas where fisheries are allowed (non-MPAs) on <span class="hlt">coral</span> <span class="hlt">reefs</span> in Fiji. The MPAs exhibited greater species richness, density, and biomass of fishes than non-MPAs. Furthermore, MPAs contained a greater abundance and biomass of grazing herbivores and piscivores as well as a greater abundance of cleaners than fished areas. We also found differences in fish associations when foraging, with feeding groups being generally more diverse and having greater biomass within MPAs than adjacent non-MPAs. Grazing by parrotfishes was 3-6 times greater, and macroalgal browsing was 3-5 times greater in MPAs than in non-MPAs. On average, MPAs had 260-280% as much <span class="hlt">coral</span> cover and only 5-25% as much macroalgal cover as their paired non-MPA sites. Finally, two of the three MPAs had three-fold more <span class="hlt">coral</span> recruits than adjacent non-MPAs. The results of this study indicate that small MPAs benefit not only populations of <span class="hlt">reef</span> fishes, but also enhance <span class="hlt">ecosystem</span> processes that are critical to <span class="hlt">reef</span> resilience within the MPAs.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5266309','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5266309"><span>Small Marine Protected Areas in Fiji Provide Refuge for <span class="hlt">Reef</span> Fish Assemblages, Feeding Groups, and <span class="hlt">Corals</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Pires, Mathias M.; Guimarães, Paulo Roberto; Hoey, Andrew S.; Hay, Mark E.</p> <p>2017-01-01</p> <p>The establishment of no-take marine protected areas (MPAs) on <span class="hlt">coral</span> <span class="hlt">reefs</span> is a common management strategy for conserving the diversity, abundance, and biomass of <span class="hlt">reef</span> organisms. Generally, well-managed and enforced MPAs can increase or maintain the diversity and function of the enclosed <span class="hlt">coral</span> <span class="hlt">reef</span>, with some of the benefits extending to adjacent non-protected <span class="hlt">reefs</span>. A fundamental question in <span class="hlt">coral</span> <span class="hlt">reef</span> conservation is whether these benefits arise within small MPAs (<1 km2), because larval input of <span class="hlt">reef</span> organisms is largely decoupled from local adult reproduction. We examined the structure of fish assemblages, composition of fish feeding groups, benthic cover, and key <span class="hlt">ecosystem</span> processes (grazing, macroalgal browsing, and <span class="hlt">coral</span> replenishment) in three small (0.5–0.8 km2) no-take MPAs and adjacent areas where fisheries are allowed (non-MPAs) on <span class="hlt">coral</span> <span class="hlt">reefs</span> in Fiji. The MPAs exhibited greater species richness, density, and biomass of fishes than non-MPAs. Furthermore, MPAs contained a greater abundance and biomass of grazing herbivores and piscivores as well as a greater abundance of cleaners than fished areas. We also found differences in fish associations when foraging, with feeding groups being generally more diverse and having greater biomass within MPAs than adjacent non-MPAs. Grazing by parrotfishes was 3–6 times greater, and macroalgal browsing was 3–5 times greater in MPAs than in non-MPAs. On average, MPAs had 260–280% as much <span class="hlt">coral</span> cover and only 5–25% as much macroalgal cover as their paired non-MPA sites. Finally, two of the three MPAs had three-fold more <span class="hlt">coral</span> recruits than adjacent non-MPAs. The results of this study indicate that small MPAs benefit not only populations of <span class="hlt">reef</span> fishes, but also enhance <span class="hlt">ecosystem</span> processes that are critical to <span class="hlt">reef</span> resilience within the MPAs. PMID:28122006</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015GeoRL..42.3980A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015GeoRL..42.3980A"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> metabolism and carbon chemistry dynamics of a <span class="hlt">coral</span> <span class="hlt">reef</span> flat</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Albright, Rebecca; Benthuysen, Jessica; Cantin, Neal; Caldeira, Ken; Anthony, Ken</p> <p>2015-05-01</p> <p>Global carbon emissions continue to acidify the oceans, motivating growing concern for the ability of <span class="hlt">coral</span> <span class="hlt">reefs</span> to maintain net positive calcification rates. Efforts to develop robust relationships between <span class="hlt">coral</span> <span class="hlt">reef</span> calcification and carbonate parameters such as aragonite saturation state (Ωarag) aim to facilitate meaningful predictions of how <span class="hlt">reef</span> calcification will change in the face of ocean acidification. Here we investigate natural trends in carbonate chemistry of a <span class="hlt">coral</span> <span class="hlt">reef</span> flat over diel cycles and relate these trends to benthic carbon fluxes by quantifying net community calcification and net community production. We find that, despite an apparent dependence of calcification on Ωarag seen in a simple pairwise relationship, if the dependence of net calcification on net photosynthesis is accounted for, knowing Ωarag does not add substantial explanatory value. This suggests that, over short time scales, the control of Ωarag on net calcification is weak relative to factors governing net photosynthesis.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35.1263B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35.1263B"><span>Chemically cued suppression of <span class="hlt">coral</span> <span class="hlt">reef</span> resilience: Where is the tipping point?</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Brooker, Rohan M.; Hay, Mark E.; Dixson, Danielle L.</p> <p>2016-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> worldwide are shifting from high-diversity, <span class="hlt">coral</span>-dominated communities to low-diversity systems dominated by seaweeds. This shift can impact essential recovery processes such as larval recruitment and <span class="hlt">ecosystem</span> resilience. Recent evidence suggests that chemical cues from certain <span class="hlt">corals</span> attract, and from certain seaweeds suppress, recruitment of juvenile fishes, with loss of <span class="hlt">coral</span> cover and increases in seaweed cover creating negative feedbacks that prevent <span class="hlt">reef</span> recovery and sustain seaweed dominance. Unfortunately, the level of seaweed increase and <span class="hlt">coral</span> decline that creates this chemically cued tipping point remains unknown, depriving managers of data-based targets to prevent damaging feedbacks. We conducted flume and field assays that suggest juvenile fishes sense and respond to cues produced by low levels of seaweed cover. However, the herbivore species we tested was more tolerant of degraded <span class="hlt">reef</span> cues than non-herbivores, possibly providing some degree of resilience if these fishes recruit, consume macroalgae, and diminish negative cues.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26087252','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26087252"><span>The Micronesia Challenge: Assessing the Relative Contribution of Stressors on <span class="hlt">Coral</span> <span class="hlt">Reefs</span> to Facilitate Science-to-Management Feedback.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Houk, Peter; Camacho, Rodney; Johnson, Steven; McLean, Matthew; Maxin, Selino; Anson, Jorg; Joseph, Eugene; Nedlic, Osamu; Luckymis, Marston; Adams, Katrina; Hess, Don; Kabua, Emma; Yalon, Anthony; Buthung, Eva; Graham, Curtis; Leberer, Trina; Taylor, Brett; van Woesik, Robert</p> <p>2015-01-01</p> <p>Fishing and pollution are chronic stressors that can prolong recovery of <span class="hlt">coral</span> <span class="hlt">reefs</span> and contribute to <span class="hlt">ecosystem</span> decline. While this premise is generally accepted, management interventions are complicated because the contributions from individual stressors are difficult to distinguish. The present study examined the extent to which fishing pressure and pollution predicted progress towards the Micronesia Challenge, an international conservation strategy initiated by the political leaders of 6 nations to conserve at least 30% of marine resources by 2020. The analyses were rooted in a defined measure of <span class="hlt">coral-reef-ecosystem</span> condition, comprised of biological metrics that described functional processes on <span class="hlt">coral</span> <span class="hlt">reefs</span>. We report that only 42% of the major <span class="hlt">reef</span> habitats exceeded the <span class="hlt">ecosystem</span>-condition threshold established by the Micronesia Challenge. Fishing pressure acting alone on outer <span class="hlt">reefs</span>, or in combination with pollution in some lagoons, best predicted both the decline and variance in <span class="hlt">ecosystem</span> condition. High variances among <span class="hlt">ecosystem</span>-condition scores reflected the large gaps between the best and worst <span class="hlt">reefs</span>, and suggested that the current scores were unlikely to remain stable through time because of low redundancy. Accounting for the presence of marine protected area (MPA) networks in statistical models did little to improve the models' predictive capabilities, suggesting limited efficacy of MPAs when grouped together across the region. Yet, localized benefits of MPAs existed and are expected to increase over time. Sensitivity analyses suggested that (i) grazing by large herbivores, (ii) high functional diversity of herbivores, and (iii) high predator biomass were most sensitive to fishing pressure, and were required for high <span class="hlt">ecosystem</span>-condition scores. Linking comprehensive fisheries management policies with these sensitive metrics, and targeting the management of pollution, will strengthen the Micronesia Challenge and preserve <span class="hlt">ecosystem</span> services that <span class="hlt">coral</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4473011','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4473011"><span>The Micronesia Challenge: Assessing the Relative Contribution of Stressors on <span class="hlt">Coral</span> <span class="hlt">Reefs</span> to Facilitate Science-to-Management Feedback</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Houk, Peter; Camacho, Rodney; Johnson, Steven; McLean, Matthew; Maxin, Selino; Anson, Jorg; Joseph, Eugene; Nedlic, Osamu; Luckymis, Marston; Adams, Katrina; Hess, Don; Kabua, Emma; Yalon, Anthony; Buthung, Eva; Graham, Curtis; Leberer, Trina; Taylor, Brett; van Woesik, Robert</p> <p>2015-01-01</p> <p>Fishing and pollution are chronic stressors that can prolong recovery of <span class="hlt">coral</span> <span class="hlt">reefs</span> and contribute to <span class="hlt">ecosystem</span> decline. While this premise is generally accepted, management interventions are complicated because the contributions from individual stressors are difficult to distinguish. The present study examined the extent to which fishing pressure and pollution predicted progress towards the Micronesia Challenge, an international conservation strategy initiated by the political leaders of 6 nations to conserve at least 30% of marine resources by 2020. The analyses were rooted in a defined measure of <span class="hlt">coral-reef-ecosystem</span> condition, comprised of biological metrics that described functional processes on <span class="hlt">coral</span> <span class="hlt">reefs</span>. We report that only 42% of the major <span class="hlt">reef</span> habitats exceeded the <span class="hlt">ecosystem</span>-condition threshold established by the Micronesia Challenge. Fishing pressure acting alone on outer <span class="hlt">reefs</span>, or in combination with pollution in some lagoons, best predicted both the decline and variance in <span class="hlt">ecosystem</span> condition. High variances among <span class="hlt">ecosystem</span>-condition scores reflected the large gaps between the best and worst <span class="hlt">reefs</span>, and suggested that the current scores were unlikely to remain stable through time because of low redundancy. Accounting for the presence of marine protected area (MPA) networks in statistical models did little to improve the models’ predictive capabilities, suggesting limited efficacy of MPAs when grouped together across the region. Yet, localized benefits of MPAs existed and are expected to increase over time. Sensitivity analyses suggested that (i) grazing by large herbivores, (ii) high functional diversity of herbivores, and (iii) high predator biomass were most sensitive to fishing pressure, and were required for high <span class="hlt">ecosystem</span>-condition scores. Linking comprehensive fisheries management policies with these sensitive metrics, and targeting the management of pollution, will strengthen the Micronesia Challenge and preserve <span class="hlt">ecosystem</span> services that <span class="hlt">coral</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28139035','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28139035"><span>The threat to <span class="hlt">coral</span> <span class="hlt">reefs</span> from more intense cyclones under climate change.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cheal, Alistair J; MacNeil, M Aaron; Emslie, Michael J; Sweatman, Hugh</p> <p>2017-04-01</p> <p>Ocean warming under climate change threatens <span class="hlt">coral</span> <span class="hlt">reefs</span> directly, through fatal heat stress to <span class="hlt">corals</span> and indirectly, by boosting the energy of cyclones that cause <span class="hlt">coral</span> destruction and loss of associated organisms. Although cyclone frequency is unlikely to rise, cyclone intensity is predicted to increase globally, causing more frequent occurrences of the most destructive cyclones with potentially severe consequences for <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. While increasing heat stress is considered a pervasive risk to <span class="hlt">coral</span> <span class="hlt">reefs</span>, quantitative estimates of threats from cyclone intensification are lacking due to limited data on cyclone impacts to inform projections. Here, using extensive data from Australia's Great Barrier <span class="hlt">Reef</span> (GBR), we show that increases in cyclone intensity predicted for this century are sufficient to greatly accelerate <span class="hlt">coral</span> <span class="hlt">reef</span> degradation. <span class="hlt">Coral</span> losses on the outer GBR were small, localized and offset by gains on undisturbed <span class="hlt">reefs</span> for more than a decade, despite numerous cyclones and periods of record heat stress, until three unusually intense cyclones over 5 years drove <span class="hlt">coral</span> cover to record lows over >1500 km. Ecological damage was particularly severe in the central-southern region where 68% of <span class="hlt">coral</span> cover was destroyed over >1000 km, forcing record declines in the species richness and abundance of associated fish communities, with many local extirpations. Four years later, recovery of average <span class="hlt">coral</span> cover was relatively slow and there were further declines in fish species richness and abundance. Slow recovery of community diversity appears likely from such a degraded starting point. Highly unusual characteristics of two of the cyclones, aside from high intensity, inflated the extent of severe ecological damage that would more typically have occurred over 100s of km. Modelling published predictions of future cyclone activity, the likelihood of more intense cyclones within time frames of <span class="hlt">coral</span> recovery by mid-century poses a global threat to <span class="hlt">coral</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSAH13A..04M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSAH13A..04M"><span>Changes in <span class="hlt">coral</span> <span class="hlt">reef</span> metabolism during the 2015 El Niño in the eastern Pacific</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>McGillis, W. R.; Manzello, D.; Smith, T. B.; Baker, A.; Fong, P.; Glynn, P.; Smith, J.; Takeshita, Y.; Martz, T. R.; Hsueh, D.; Langdon, C.; Price, N.; Mate, J.</p> <p>2016-02-01</p> <p>The likely strong 2015-2016 El Niño event offers an opportunity to assess <span class="hlt">coral</span> <span class="hlt">reef</span> benthic metabolism under stressful high temperatures, <span class="hlt">coral</span> bleaching, and mortality. During a period of increasing ocean temperatures caused by the 2015-2016 El Niño-Southern Oscillation (ENSO), we assessed the metabolism, at hourly intervals, of eastern Pacific <span class="hlt">coral</span> <span class="hlt">reefs</span> using the Benthic <span class="hlt">Ecosystem</span> and Acidification Measurement System (BEAMS). We measured <span class="hlt">coral</span> <span class="hlt">reef</span> net <span class="hlt">ecosystem</span> productivity (NEP) and net <span class="hlt">ecosystem</span> calcification (NEC) in 2014 before the start of the El Niño event and in 2015 during the first anomalously high sea surface temperatures of the 2015 El Niño. Increases in ocean temperatures of 1-2°C between 2014 and 2015 caused over 30% decline in calcification at Uva Is. (Panama) and Darwin Is. (Galapagos), along with significant <span class="hlt">coral</span> bleaching at Uva and <span class="hlt">coral</span> paling at Darwin. Warming at Saboga Island, in the seasonally upwelling Gulf of Panama, was only 0.3oC, did not result in significant bleaching, and was accompanied by a significant increase in <span class="hlt">coral</span> <span class="hlt">reef</span> metabolism. Additional key findings include an increase in nighttime dissolution of calcium carbonate during ENSO heating. Light-NEP and light-NEC relationships were generated for each location, and showed that variations in metabolism were strongly correlated with the incident bottom solar intensity, with strong daily cycles and patterns of light-enhanced calcification also identified. The response of different <span class="hlt">coral</span> species also provides in situ data on the varying metabolism. The metabolism of the 2015-2016 El Niño shows the possible <span class="hlt">reef</span> function under future warming and acidified conditions. These emerging results may be harbingers of significant further decreases in metabolism, and other detrimental impacts, if this region experiences additional warming during the current ENSO event.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2817220','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=2817220"><span>Flattening of Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span>: region-wide declines in architectural complexity</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Alvarez-Filip, Lorenzo; Dulvy, Nicholas K.; Gill, Jennifer A.; Côté, Isabelle M.; Watkinson, Andrew R.</p> <p>2009-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are rich in biodiversity, in large part because their highly complex architecture provides shelter and resources for a wide range of organisms. Recent rapid declines in hard <span class="hlt">coral</span> cover have occurred across the Caribbean region, but the concomitant consequences for <span class="hlt">reef</span> architecture have not been quantified on a large scale to date. We provide, to our knowledge, the first region-wide analysis of changes in <span class="hlt">reef</span> architectural complexity, using nearly 500 surveys across 200 <span class="hlt">reefs</span>, between 1969 and 2008. The architectural complexity of Caribbean <span class="hlt">reefs</span> has declined nonlinearly with the near disappearance of the most complex <span class="hlt">reefs</span> over the last 40 years. The flattening of Caribbean <span class="hlt">reefs</span> was apparent by the early 1980s, followed by a period of stasis between 1985 and 1998 and then a resumption of the decline in complexity to the present. Rates of loss are similar on shallow (<6 m), mid-water (6–20 m) and deep (>20 m) <span class="hlt">reefs</span> and are consistent across all five subregions. The temporal pattern of declining architecture coincides with key events in recent Caribbean ecological history: the loss of structurally complex Acropora <span class="hlt">corals</span>, the mass mortality of the grazing urchin Diadema antillarum and the 1998 El Nino Southern Oscillation-induced worldwide <span class="hlt">coral</span> bleaching event. The consistently low estimates of current architectural complexity suggest regional-scale degradation and homogenization of <span class="hlt">reef</span> structure. The widespread loss of architectural complexity is likely to have serious consequences for <span class="hlt">reef</span> biodiversity, <span class="hlt">ecosystem</span> functioning and associated environmental services. PMID:19515663</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22768189','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22768189"><span>The role of turtles as <span class="hlt">coral</span> <span class="hlt">reef</span> macroherbivores.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Goatley, Christopher H R; Hoey, Andrew S; Bellwood, David R</p> <p>2012-01-01</p> <p>Herbivory is widely accepted as a vital function on <span class="hlt">coral</span> <span class="hlt">reefs</span>. To date, the majority of studies examining herbivory in <span class="hlt">coral</span> <span class="hlt">reef</span> environments have focused on the roles of fishes and/or urchins, with relatively few studies considering the potential role of macroherbivores in <span class="hlt">reef</span> processes. Here, we introduce evidence that highlights the potential role of marine turtles as herbivores on <span class="hlt">coral</span> <span class="hlt">reefs</span>. While conducting experimental habitat manipulations to assess the roles of herbivorous <span class="hlt">reef</span> fishes we observed green turtles (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata) showing responses that were remarkably similar to those of herbivorous fishes. Reducing the sediment load of the epilithic algal matrix on a <span class="hlt">coral</span> <span class="hlt">reef</span> resulted in a forty-fold increase in grazing by green turtles. Hawksbill turtles were also observed to browse transplanted thalli of the macroalga Sargassum swartzii in a <span class="hlt">coral</span> <span class="hlt">reef</span> environment. These responses not only show strong parallels to herbivorous <span class="hlt">reef</span> fishes, but also highlight that marine turtles actively, and intentionally, remove algae from <span class="hlt">coral</span> <span class="hlt">reefs</span>. When considering the size and potential historical abundance of marine turtles we suggest that these potentially valuable herbivores may have been lost from many <span class="hlt">coral</span> <span class="hlt">reefs</span> before their true importance was understood.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26064625','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26064625"><span>Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a <span class="hlt">reef</span>-building <span class="hlt">coral</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pinzón, Jorge H; Kamel, Bishoy; Burge, Colleen A; Harvell, C Drew; Medina, Mónica; Weil, Ernesto; Mydlarz, Laura D</p> <p>2015-04-01</p> <p>Climate change is negatively affecting the stability of natural <span class="hlt">ecosystems</span>, especially <span class="hlt">coral</span> <span class="hlt">reefs</span>. The dissociation of the symbiosis between <span class="hlt">reef</span>-building <span class="hlt">corals</span> and their algal symbiont, or <span class="hlt">coral</span> bleaching, has been linked to increased sea surface temperatures. <span class="hlt">Coral</span> bleaching has significant impacts on <span class="hlt">corals</span>, including an increase in disease outbreaks that can permanently change the entire <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. Yet, little is known about the impacts of <span class="hlt">coral</span> bleaching on the <span class="hlt">coral</span> immune system. In this study, whole transcriptome analysis of the <span class="hlt">coral</span> holobiont and each of the associate components (i.e. <span class="hlt">coral</span> host, algal symbiont and other associated microorganisms) was used to determine changes in gene expression in <span class="hlt">corals</span> affected by a natural bleaching event as well as during the recovery phase. The main findings include evidence that the <span class="hlt">coral</span> holobiont and the <span class="hlt">coral</span> host have different responses to bleaching, and the host immune system appears suppressed even a year after a bleaching event. These results support the hypothesis that <span class="hlt">coral</span> bleaching changes the expression of innate immune genes of <span class="hlt">corals</span>, and these effects can last even after recovery of symbiont populations. Research on the role of immunity on <span class="hlt">coral</span>'s resistance to stressors can help make informed predictions on the future of <span class="hlt">corals</span> and <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4448857','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4448857"><span>Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a <span class="hlt">reef</span>-building <span class="hlt">coral</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Pinzón, Jorge H.; Kamel, Bishoy; Burge, Colleen A.; Harvell, C. Drew; Medina, Mónica; Weil, Ernesto; Mydlarz, Laura D.</p> <p>2015-01-01</p> <p>Climate change is negatively affecting the stability of natural <span class="hlt">ecosystems</span>, especially <span class="hlt">coral</span> <span class="hlt">reefs</span>. The dissociation of the symbiosis between <span class="hlt">reef</span>-building <span class="hlt">corals</span> and their algal symbiont, or <span class="hlt">coral</span> bleaching, has been linked to increased sea surface temperatures. <span class="hlt">Coral</span> bleaching has significant impacts on <span class="hlt">corals</span>, including an increase in disease outbreaks that can permanently change the entire <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. Yet, little is known about the impacts of <span class="hlt">coral</span> bleaching on the <span class="hlt">coral</span> immune system. In this study, whole transcriptome analysis of the <span class="hlt">coral</span> holobiont and each of the associate components (i.e. <span class="hlt">coral</span> host, algal symbiont and other associated microorganisms) was used to determine changes in gene expression in <span class="hlt">corals</span> affected by a natural bleaching event as well as during the recovery phase. The main findings include evidence that the <span class="hlt">coral</span> holobiont and the <span class="hlt">coral</span> host have different responses to bleaching, and the host immune system appears suppressed even a year after a bleaching event. These results support the hypothesis that <span class="hlt">coral</span> bleaching changes the expression of innate immune genes of <span class="hlt">corals</span>, and these effects can last even after recovery of symbiont populations. Research on the role of immunity on <span class="hlt">coral</span>'s resistance to stressors can help make informed predictions on the future of <span class="hlt">corals</span> and <span class="hlt">coral</span> <span class="hlt">reefs</span>. PMID:26064625</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015BGeo...12.1339J','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015BGeo...12.1339J"><span>Evaluation of <span class="hlt">coral</span> <span class="hlt">reef</span> carbonate production models at a global scale</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Jones, N. S.; Ridgwell, A.; Hendy, E. J.</p> <p>2015-03-01</p> <p>Calcification by <span class="hlt">coral</span> <span class="hlt">reef</span> communities is estimated to account for half of all carbonate produced in shallow water environments and more than 25% of the total carbonate buried in marine sediments globally. Production of calcium carbonate by <span class="hlt">coral</span> <span class="hlt">reefs</span> is therefore an important component of the global carbon cycle; it is also threatened by future global warming and other global change pressures. Numerical models of reefal carbonate production are needed for understanding how carbonate deposition responds to environmental conditions including atmospheric CO2 concentrations in the past and into the future. However, before any projections can be made, the basic test is to establish model skill in recreating present-day calcification rates. Here we evaluate four published model descriptions of <span class="hlt">reef</span> carbonate production in terms of their predictive power, at both local and global scales. We also compile available global data on <span class="hlt">reef</span> calcification to produce an independent observation-based data set for the model evaluation of carbonate budget outputs. The four calcification models are based on functions sensitive to combinations of light availability, aragonite saturation (Ωa) and temperature and were implemented within a specifically developed global framework, the Global <span class="hlt">Reef</span> Accretion Model (GRAM). No model was able to reproduce independent rate estimates of whole-<span class="hlt">reef</span> calcification, and the output from the temperature-only based approach was the only model to significantly correlate with <span class="hlt">coral</span>-calcification rate observations. The absence of any predictive power for whole <span class="hlt">reef</span> systems, even when consistent at the scale of individual <span class="hlt">corals</span>, points to the overriding importance of <span class="hlt">coral</span> cover estimates in the calculations. Our work highlights the need for an <span class="hlt">ecosystem</span> modelling approach, accounting for population dynamics in terms of mortality and recruitment and hence calcifier abundance, in estimating global <span class="hlt">reef</span> carbonate budgets. In addition, validation of <span class="hlt">reef</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUFMEP13A0817L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUFMEP13A0817L"><span>Impact Of <span class="hlt">Coral</span> Structures On Wave Directional Spreading Across A Shallow <span class="hlt">Reef</span> Flat - Lizard Island, Northern Great Barrier <span class="hlt">Reef</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Leon, J. X.; Baldock, T.; Callaghan, D. P.; Hoegh-guldberg, O.; Mumby, P.; Phinn, S. R.; Roelfsema, C. M.; Saunders, M. I.</p> <p>2013-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> hydrodynamics operate at several and overlapping spatial-temporal scales. Waves have the most important forcing function on shallow (< 5 m) <span class="hlt">reefs</span> as they drive most ecological and biogeochemical processes by exerting direct physical stress, directly mixing water (temperature and nutrients) and transporting sediments, nutrients and plankton. <span class="hlt">Reef</span> flats are very effective at dissipating wave energy and providing an important <span class="hlt">ecosystem</span> service by protecting highly valued shorelines. The effectiveness of <span class="hlt">reef</span> flats to dissipate wave energy is related to the extreme hydraulic roughness of the benthos and substrate composition. Hydraulic roughness is usually obtained empirically from frictional-dissipation calculations, as detailed field measurements of bottom roughness (e.g. chain-method or profile gauges) is a very labour and time-consuming task. In this study we measured the impact of <span class="hlt">coral</span> structures on wave directional spreading. Field data was collected during October 2012 across a <span class="hlt">reef</span> flat on Lizard Island, northern Great Barrier <span class="hlt">Reef</span>. Wave surface levels were measured using an array of self-logging pressure sensors. A rapid in situ close-range photogrammetric method was used to create a high-resolution (0.5 cm) image mosaic and digital elevation model. Individual <span class="hlt">coral</span> heads were extracted from these datasets using geo-morphometric and object-based image analysis techniques. Wave propagation was modelled using a modified version of the SWAN model which includes the measured <span class="hlt">coral</span> structures in 2m by 1m cells across the <span class="hlt">reef</span>. The approach followed a cylinder drag approach, neglecting skin friction and inertial components. Testing against field data included bed skin friction. Our results show, for the first time, how the variability of the <span class="hlt">reef</span> benthos structures affects wave dissipation across a shallow <span class="hlt">reef</span> flat. This has important implications globally for <span class="hlt">coral</span> <span class="hlt">reefs</span>, due to the large extent of their area occupied by <span class="hlt">reef</span> flats, particularly, as</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25875218','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25875218"><span>Simplification of Caribbean <span class="hlt">reef</span>-fish assemblages over decades of <span class="hlt">coral</span> <span class="hlt">reef</span> degradation.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Alvarez-Filip, Lorenzo; Paddack, Michelle J; Collen, Ben; Robertson, D Ross; Côté, Isabelle M</p> <p>2015-01-01</p> <p>Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span> are becoming structurally simpler, largely due to human impacts. The consequences of this trend for <span class="hlt">reef</span>-associated communities are currently unclear, but expected to be profound. Here, we assess whether changes in fish assemblages have been non-random over several decades of declining <span class="hlt">reef</span> structure. More specifically, we predicted that species that depend exclusively on <span class="hlt">coral</span> <span class="hlt">reef</span> habitat (i.e., habitat specialists) should be at a disadvantage compared to those that use a broader array of habitats (i.e., habitat generalists). Analysing 3727 abundance trends of 161 Caribbean <span class="hlt">reef</span>-fishes, surveyed between 1980 and 2006, we found that the trends of habitat-generalists and habitat-specialists differed markedly. The abundance of specialists started to decline in the mid-1980s, reaching a low of ~60% of the 1980 baseline by the mid-1990s. Both the average and the variation in abundance of specialists have increased since the early 2000s, although the average is still well below the baseline level of 1980. This modest recovery occurred despite no clear evidence of a regional recovery in <span class="hlt">coral</span> <span class="hlt">reef</span> habitat quality in the Caribbean during the 2000s. In contrast, the abundance of generalist fishes remained relatively stable over the same three decades. Few specialist species are fished, thus their population declines are most likely linked to habitat degradation. These results mirror the observed trends of replacement of specialists by generalists, observed in terrestrial taxa across the globe. A significant challenge that arises from our findings is now to investigate if, and how, such community-level changes in fish populations affect <span class="hlt">ecosystem</span> function.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_14");'>14</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li class="active"><span>16</span></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_16 --> <div id="page_17" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li class="active"><span>17</span></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="321"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4430502','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4430502"><span><span class="hlt">Reef</span> Fishes in Biodiversity Hotspots Are at Greatest Risk from Loss of <span class="hlt">Coral</span> Species</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Holbrook, Sally J.; Schmitt, Russell J.; Messmer, Vanessa; Brooks, Andrew J.; Srinivasan, Maya; Munday, Philip L.; Jones, Geoffrey P.</p> <p>2015-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are under a variety of threats from global change and anthropogenic disturbances that are reducing the number and type of <span class="hlt">coral</span> species on <span class="hlt">reefs</span>. <span class="hlt">Coral</span> <span class="hlt">reefs</span> support upwards of one third of all marine species of fish, so the loss of <span class="hlt">coral</span> habitat may have substantial consequences to local fish diversity. We posit that the effects of habitat degradation will be most severe in <span class="hlt">coral</span> regions with highest biodiversity of fishes due to greater specialization by fishes for particular <span class="hlt">coral</span> habitats. Our novel approach to this important but untested hypothesis was to conduct the same field experiment at three geographic locations across the Indo-Pacific biodiversity gradient (Papua New Guinea; Great Barrier <span class="hlt">Reef</span>, Australia; French Polynesia). Specifically, we experimentally explored whether the response of local fish communities to identical changes in diversity of habitat-providing <span class="hlt">corals</span> was independent of the size of the regional species pool of fishes. We found that the proportional reduction (sensitivity) in fish biodiversity to loss of <span class="hlt">coral</span> diversity was greater for regions with larger background species pools, reflecting variation in the degree of habitat specialization of fishes across the Indo-Pacific diversity gradient. This result implies that habitat-associated fish in diversity hotspots are at greater risk of local extinction to a given loss of habitat diversity compared to regions with lower species richness. This mechanism, related to the positive relationship between habitat specialization and regional biodiversity, and the elevated extinction risk this poses for biodiversity hotspots, may apply to species in other types of <span class="hlt">ecosystems</span>. PMID:25970588</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25970588','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25970588"><span><span class="hlt">Reef</span> fishes in biodiversity hotspots are at greatest risk from loss of <span class="hlt">coral</span> species.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Holbrook, Sally J; Schmitt, Russell J; Messmer, Vanessa; Brooks, Andrew J; Srinivasan, Maya; Munday, Philip L; Jones, Geoffrey P</p> <p>2015-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are under a variety of threats from global change and anthropogenic disturbances that are reducing the number and type of <span class="hlt">coral</span> species on <span class="hlt">reefs</span>. <span class="hlt">Coral</span> <span class="hlt">reefs</span> support upwards of one third of all marine species of fish, so the loss of <span class="hlt">coral</span> habitat may have substantial consequences to local fish diversity. We posit that the effects of habitat degradation will be most severe in <span class="hlt">coral</span> regions with highest biodiversity of fishes due to greater specialization by fishes for particular <span class="hlt">coral</span> habitats. Our novel approach to this important but untested hypothesis was to conduct the same field experiment at three geographic locations across the Indo-Pacific biodiversity gradient (Papua New Guinea; Great Barrier <span class="hlt">Reef</span>, Australia; French Polynesia). Specifically, we experimentally explored whether the response of local fish communities to identical changes in diversity of habitat-providing <span class="hlt">corals</span> was independent of the size of the regional species pool of fishes. We found that the proportional reduction (sensitivity) in fish biodiversity to loss of <span class="hlt">coral</span> diversity was greater for regions with larger background species pools, reflecting variation in the degree of habitat specialization of fishes across the Indo-Pacific diversity gradient. This result implies that habitat-associated fish in diversity hotspots are at greater risk of local extinction to a given loss of habitat diversity compared to regions with lower species richness. This mechanism, related to the positive relationship between habitat specialization and regional biodiversity, and the elevated extinction risk this poses for biodiversity hotspots, may apply to species in other types of <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70022061','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70022061"><span>African dust and the demise of Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Shinn, E.A.; Smith, G.W.; Prospero, J.M.; Betzer, P.; Hayes, M.L.; Garrison, V.; Barber, R.T.</p> <p>2000-01-01</p> <p>The vitality of Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span> has undergone a continual state of decline since the late 1970s, a period of time coincidental with large increases in transatlantic dust transport. It is proposed that the hundreds of millions of tons/year of soil dust that have been crossing the Atlantic during the last 25 years could be a significant contributor to <span class="hlt">coral</span> <span class="hlt">reef</span> decline and may be affecting other <span class="hlt">ecosystems</span>. Benchmark events, such as near synchronous Caribbean-wide mortalities of acroporid <span class="hlt">corals</span> and the urchin Diadema in 1983, and <span class="hlt">coral</span> bleaching beginning in 1987, correlate with the years of maximum dust flux into the Caribbean. Besides crustal elements, in particular Fe, Si, and aluminosilicate clays, the dust can serve as a substrate for numerous species of viable spores, especially the soil fungus Aspergillus. Aspergillus sydowii, the cause of an ongoing Caribbean-wide seafan disease, has been cultured from Caribbean air samples and used to inoculate sea fans.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=230596&keyword=coral+AND+reef&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=230596&keyword=coral+AND+reef&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Relating Landscape Development Intensity to <span class="hlt">Coral</span> <span class="hlt">Reef</span> Condition in the Watersheds of St. Croix, U.S. Virgin Islands</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Diagnosing the degree to which local landscape activities impact <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> and their ecological services is critically important to coastal and watershed decision-makers. We report, for the first time, a study that relates <span class="hlt">coral</span> <span class="hlt">reef</span> condition metrics to metrics of h...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3510096','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3510096"><span>Simulations of Long-Term Community Dynamics in <span class="hlt">Coral</span> <span class="hlt">Reefs</span> - How Perturbations Shape Trajectories</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Kubicek, Andreas; Muhando, Christopher; Reuter, Hauke</p> <p>2012-01-01</p> <p>Tropical <span class="hlt">coral</span> <span class="hlt">reefs</span> feature extraordinary biodiversity and high productivity rates in oligotrophic waters. Due to increasing frequencies of perturbations – anthropogenic and natural – many <span class="hlt">reefs</span> are under threat. Such perturbations often have devastating effects on these unique <span class="hlt">ecosystems</span> and especially if they occur simultaneously and amplify each other's impact, they might trigger a phase shift and create irreversible conditions. We developed a generic, spatially explicit, individual-based model in which competition drives the dynamics of a virtual benthic <span class="hlt">reef</span> community – comprised of scleractinian <span class="hlt">corals</span> and algae – under different environmental settings. Higher system properties, like population dynamics or community composition arise through self-organization as emergent properties. The model was parameterized for a typical <span class="hlt">coral</span> <span class="hlt">reef</span> site at Zanzibar, Tanzania and features <span class="hlt">coral</span> bleaching and physical disturbance regimes as major sources of perturbations. Our results show that various types and modes (intensities and frequencies) of perturbations create diverse outcomes and that the switch from high diversity to single species dominance can be evoked by small changes in a key parameter. Here we extend the understanding of <span class="hlt">coral</span> <span class="hlt">reef</span> resilience and the identification of key processes, drivers and respective thresholds, responsible for changes in local situations. One future goal is to provide a tool which may aid decision making processes in management of <span class="hlt">coral</span> <span class="hlt">reefs</span>. PMID:23209397</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27575738','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27575738"><span>Multiple Stressors and the Functioning of <span class="hlt">Coral</span> <span class="hlt">Reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Harborne, Alastair R; Rogers, Alice; Bozec, Yves-Marie; Mumby, Peter J</p> <p>2017-01-03</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> provide critical services to coastal communities, and these services rely on <span class="hlt">ecosystem</span> functions threatened by stressors. By summarizing the threats to the functioning of <span class="hlt">reefs</span> from fishing, climate change, and decreasing water quality, we highlight that these stressors have multiple, conflicting effects on functionally similar groups of species and their interactions, and that the overall effects are often uncertain because of a lack of data or variability among taxa. The direct effects of stressors on links among functional groups, such as predator-prey interactions, are particularly uncertain. Using qualitative modeling, we demonstrate that this uncertainty of stressor impacts on functional groups (whether they are positive, negative, or neutral) can have significant effects on models of <span class="hlt">ecosystem</span> stability, and reducing uncertainty is vital for understanding changes to <span class="hlt">reef</span> functioning. This review also provides guidance for future models of <span class="hlt">reef</span> functioning, which should include interactions among functional groups and the cumulative effect of stressors.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017ARMS....9..445H','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017ARMS....9..445H"><span>Multiple Stressors and the Functioning of <span class="hlt">Coral</span> <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Harborne, Alastair R.; Rogers, Alice; Bozec, Yves-Marie; Mumby, Peter J.</p> <p>2017-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> provide critical services to coastal communities, and these services rely on <span class="hlt">ecosystem</span> functions threatened by stressors. By summarizing the threats to the functioning of <span class="hlt">reefs</span> from fishing, climate change, and decreasing water quality, we highlight that these stressors have multiple, conflicting effects on functionally similar groups of species and their interactions, and that the overall effects are often uncertain because of a lack of data or variability among taxa. The direct effects of stressors on links among functional groups, such as predator-prey interactions, are particularly uncertain. Using qualitative modeling, we demonstrate that this uncertainty of stressor impacts on functional groups (whether they are positive, negative, or neutral) can have significant effects on models of <span class="hlt">ecosystem</span> stability, and reducing uncertainty is vital for understanding changes to <span class="hlt">reef</span> functioning. This review also provides guidance for future models of <span class="hlt">reef</span> functioning, which should include interactions among functional groups and the cumulative effect of stressors.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29205289','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29205289"><span>Can mesophotic <span class="hlt">reefs</span> replenish shallow <span class="hlt">reefs</span>? Reduced <span class="hlt">coral</span> reproductive performance casts a doubt.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Shlesinger, Tom; Grinblat, Mila; Rapuano, Hanna; Amit, Tal; Loya, Yossi</p> <p>2018-02-01</p> <p>Mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> (i.e., deep <span class="hlt">coral</span> <span class="hlt">reefs</span> at 30-120 m depth) appear to be thriving while many shallow <span class="hlt">reefs</span> in the world are declining. Amid efforts to understand and manage their decline, it was suggested that mesophotic <span class="hlt">reefs</span> might serve as natural refuges and a possible source of propagules for the shallow <span class="hlt">reefs</span>. However, our knowledge of how reproductive performance of <span class="hlt">corals</span> alters with depth is sparse. Here, we present a comprehensive study of the reproductive phenology, fecundity, and abundance of seven <span class="hlt">reef</span>-building conspecific <span class="hlt">corals</span> in shallow and mesophotic habitats. Significant differences were found in the synchrony and timing of gametogenesis and spawning between shallow and mesophotic <span class="hlt">coral</span> populations. Thus, mesophotic populations exhibited delayed or protracted spawning events, which led to spawning of the mesophotic colonies in large proportions at times where the shallow ones had long been depleted of reproductive material. All species investigated demonstrated a substantial reduction in fecundity and/or oocyte sizes at mesophotic depths (40-60 m). Two species (Seriatopora hystrix and Galaxea fascicularis) displayed a reduction in both fecundity and oocyte size at mesophotic depths. Turbinaria reniformis had only reduced fecundity and Acropora squarrosa and Acropora valida only reduced oocyte size. In Montipora verrucosa, reduced fecundity was found during one annual reproductive season while, in the following year, only reduced oocyte size was found. In contrast, reduced oocyte size in mesophotic populations of Acropora squarrosa was consistent along three studied years. One species, Acropora pharaonis, was found to be infertile at mesophotic depths along two studied years. This indicates that reproductive performance decreases with depth; and that although some species are capable of reproducing at mesophotic depths, their contribution to the replenishment of shallow <span class="hlt">reefs</span> may be inconsequential. Reduced reproductive performance</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25251270','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25251270"><span>Oceanic forcing of <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lowe, Ryan J; Falter, James L</p> <p>2015-01-01</p> <p>Although the oceans play a fundamental role in shaping the distribution and function of <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide, a modern understanding of the complex interactions between ocean and <span class="hlt">reef</span> processes is still only emerging. These dynamics are especially challenging owing to both the broad range of spatial scales (less than a meter to hundreds of kilometers) and the complex physical and biological feedbacks involved. Here, we review recent advances in our understanding of these processes, ranging from the small-scale mechanics of flow around <span class="hlt">coral</span> communities and their influence on nutrient exchange to larger, <span class="hlt">reef</span>-scale patterns of wave- and tide-driven circulation and their effects on <span class="hlt">reef</span> water quality and perceived rates of metabolism. We also examine regional-scale drivers of <span class="hlt">reefs</span> such as coastal upwelling, internal waves, and extreme disturbances such as cyclones. Our goal is to show how a wide range of ocean-driven processes ultimately shape the growth and metabolism of <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2007AGUFM.B53E..05E','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2007AGUFM.B53E..05E"><span>Few Like it Hot: <span class="hlt">Coral</span> <span class="hlt">Reef</span> Reponses to Elevated Temperatures and CO2</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Eakin, C. M.; Gledhill, D. K.; Heron, S. F.; Skirving, W.; Christensen, T.; Morgan, J.; Liu, G.; Strong, A. E.</p> <p>2007-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> live within a fairly narrow envelope of environmental conditions constrained by water temperatures, light, salinity, nutrients, bathymetry and the aragonite saturation state of seawater. As documented in numerous studies, the world's <span class="hlt">coral</span> <span class="hlt">reefs</span> are "in crisis" as a result of human impacts on their environment. While local stresses currently dominate, <span class="hlt">coral</span> <span class="hlt">reefs</span> are increasingly confronted with global-scale changes due to rising greenhouse gas concentrations. These changes are rapidly modifying the environmental envelope of <span class="hlt">coral</span> <span class="hlt">reefs</span> through both increased thermal stress and ocean acidification. In the former case, there is a well-documented relationship between thermal stress and the response of <span class="hlt">corals</span> that include <span class="hlt">coral</span> bleaching, disease, and mortality. Clear tolerance thresholds exist beyond which high temperature and accumulated thermal stress have deleterious effects. However, the synergistic effects of increasing temperature and ocean acidification are not yet fully understood. At this time, there is mounting concern that decreasing pH and aragonite saturation state will cause net <span class="hlt">reef</span> accretion to cease or become negative. The threshold at which this could occur is likely to be reached much sooner than the pH drop necessary to induce carbonate dissolution. Both the thermal and chemical limits that control <span class="hlt">coral</span> survival and <span class="hlt">reef</span> growth will likely be passed before 2100 assuming even conservative projections reported in the 4th Assessment Report of the Intergovernmental Panel on Climate Change. This talk will discuss these thresholds and their ramifications for <span class="hlt">ecosystems</span> and resource management.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012GBioC..26.3012G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012GBioC..26.3012G"><span>Short-term and seasonal pH,pCO2and saturation state variability in a <span class="hlt">coral-reef</span> <span class="hlt">ecosystem</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Gray, Sarah E. C.; Degrandpre, Michael D.; Langdon, Chris; Corredor, Jorge E.</p> <p>2012-09-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are predicted to be one of the <span class="hlt">ecosystems</span> most sensitive to ocean acidification. To improve predictions of <span class="hlt">coral</span> <span class="hlt">reef</span> response to acidification, we need to better characterize the natural range of variability of pH, partial pressure of carbon dioxide (pCO2) and calcium carbonate saturation states (Ω). In this study, autonomous sensors for pH and pCO2 were deployed on Media Luna <span class="hlt">reef</span>, Puerto Rico over three seasons from 2007 to 2008. High temporal resolution CaCO3 saturation states were calculated from the in situ data, giving a much more detailed characterization of <span class="hlt">reef</span> saturation states than previously possible. <span class="hlt">Reef</span> pH, pCO2 and aragonite saturation (ΩAr) ranged from 7.89 to 8.17 pH units, 176-613 μatm and 2.7-4.7, respectively, in the range characteristic of most other previously studied <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. The diel pH, pCO2 and Ω cycles were also large, encompassing about half of the seasonal range of variability. Warming explained about 50% of the seasonal supersaturation in mean pCO2, with the remaining supersaturation primarily due to net heterotrophy and net CaCO3 production. Net heterotrophy was likely driven by remineralization of mangrove derived organic carbon which continued into the fall, sustaining high pCO2 levels until early winter when the pCO2 returned to offshore values. As a consequence, the <span class="hlt">reef</span> was a source of CO2 to the atmosphere during the summer and fall and a sink during winter, resulting in a net annual source of 0.73 ± 1.7 mol m-2 year-1. These results show that <span class="hlt">reefs</span> are exposed to a wide range of saturation states in their natural environment. Mean ΩAr levels will drop to 3.0 when atmospheric CO2 increases to 500 μatm and ΩAr will be less than 3.0 for greater than 70% of the time in the summer. Long duration exposure to these low ΩAr levels are expected to significantly decrease calcification rates on the <span class="hlt">reef</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/FR-2010-08-12/pdf/2010-19889.pdf','FEDREG'); return false;" href="https://www.gpo.gov/fdsys/pkg/FR-2010-08-12/pdf/2010-19889.pdf"><span>75 FR 48934 - <span class="hlt">Coral</span> <span class="hlt">Reef</span> Conservation Program Implementation Guidelines</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collection.action?collectionCode=FR">Federal Register 2010, 2011, 2012, 2013, 2014</a></p> <p></p> <p>2010-08-12</p> <p>...-01] RIN 0648-ZC19 <span class="hlt">Coral</span> <span class="hlt">Reef</span> Conservation Program Implementation Guidelines AGENCY: National Oceanic... Guidelines (Guidelines) for the <span class="hlt">Coral</span> <span class="hlt">Reef</span> Conservation Program (CRCP or Program) under the <span class="hlt">Coral</span> <span class="hlt">Reef</span>... assistance for <span class="hlt">coral</span> <span class="hlt">reef</span> conservation projects under the Act. NOAA revised the Implementation Guidelines for...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3386948','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3386948"><span>The Role of Turtles as <span class="hlt">Coral</span> <span class="hlt">Reef</span> Macroherbivores</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Goatley, Christopher H. R.; Hoey, Andrew S.; Bellwood, David R.</p> <p>2012-01-01</p> <p>Herbivory is widely accepted as a vital function on <span class="hlt">coral</span> <span class="hlt">reefs</span>. To date, the majority of studies examining herbivory in <span class="hlt">coral</span> <span class="hlt">reef</span> environments have focused on the roles of fishes and/or urchins, with relatively few studies considering the potential role of macroherbivores in <span class="hlt">reef</span> processes. Here, we introduce evidence that highlights the potential role of marine turtles as herbivores on <span class="hlt">coral</span> <span class="hlt">reefs</span>. While conducting experimental habitat manipulations to assess the roles of herbivorous <span class="hlt">reef</span> fishes we observed green turtles (Chelonia mydas) and hawksbill turtles (Eretmochelys imbricata) showing responses that were remarkably similar to those of herbivorous fishes. Reducing the sediment load of the epilithic algal matrix on a <span class="hlt">coral</span> <span class="hlt">reef</span> resulted in a forty-fold increase in grazing by green turtles. Hawksbill turtles were also observed to browse transplanted thalli of the macroalga Sargassum swartzii in a <span class="hlt">coral</span> <span class="hlt">reef</span> environment. These responses not only show strong parallels to herbivorous <span class="hlt">reef</span> fishes, but also highlight that marine turtles actively, and intentionally, remove algae from <span class="hlt">coral</span> <span class="hlt">reefs</span>. When considering the size and potential historical abundance of marine turtles we suggest that these potentially valuable herbivores may have been lost from many <span class="hlt">coral</span> <span class="hlt">reefs</span> before their true importance was understood. PMID:22768189</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16703761','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16703761"><span>Status and progress in <span class="hlt">coral</span> <span class="hlt">reef</span> disease research.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Weil, Ernesto; Smith, Garriet; Gil-Agudelo, Diego L</p> <p>2006-03-23</p> <p>Recent findings on the ecology, etiology and pathology of <span class="hlt">coral</span> pathogens, host resistance mechanisms, previously unknown disease/syndromes and the global nature of <span class="hlt">coral</span> <span class="hlt">reef</span> diseases have increased our concern about the health and future of <span class="hlt">coral</span> <span class="hlt">reef</span> communities. Much of what has been discovered in the past 4 years is presented in this special issue. Among the significant findings, the role that various Vibrio species play in <span class="hlt">coral</span> disease and health, the composition of the 'normal microbiota' of <span class="hlt">corals</span>, and the possible role of viruses in the disease process are important additions to our knowledge. New information concerning disease resistance and vectors, variation in pathogen composition for both fungal diseases of gorgonians and black band disease across oceans, environmental effects on disease susceptibility and resistance, and temporal and spatial disease variations among different <span class="hlt">coral</span> species is presented in a number of papers. While the Caribbean may still be the 'disease hot spot' for <span class="hlt">coral</span> <span class="hlt">reefs</span>, it is now clear that diseases of <span class="hlt">coral</span> <span class="hlt">reef</span> organisms have become a global threat to <span class="hlt">coral</span> <span class="hlt">reefs</span> and a major cause of <span class="hlt">reef</span> deterioration.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/20873043','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/20873043"><span><span class="hlt">Coral</span> diseases and bleaching on Colombian Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Navas-Camacho, Raúl; Gil-Agudelo, Diego Luis; Rodríguez-Ramírez, Alberto; Reyes-Nivia, María Catalina; Garzón-Ferreira, Jaime</p> <p>2010-05-01</p> <p>Since 1998 the National Monitoring System for the <span class="hlt">Coral</span> <span class="hlt">Reefs</span> of Colombia (SIMAC) has monitored the occurrence of <span class="hlt">coral</span> bleaching and diseases in some Colombian <span class="hlt">coral</span> <span class="hlt">reefs</span> (permanent stations at San Andres Island, Rosario Islands, Tayrona, San Bernardo Islands and Urabá). The main purpose is to evaluate their health status and to understand the factors that have been contributing to their decline. To estimate these occurrences, annual surveys in 126 permanent belt transects (10 x 2m) with different depth intervals (3-6 meters, 9-12 meters and 15-18 meters) are performed at all <span class="hlt">reef</span> sites. Data from the 1998-2004 period, revealed that San Andrés Island had many colonies with diseases (38.9 colonies/m2), and Urabá had high numbers with bleaching (54.4 colonies/m2). Of the seven reported <span class="hlt">coral</span> diseases studied, Dark Spots Disease (DSD), and White Plague Disease (WPD) were noteworthy because they occurred in all Caribbean monitored sites, and because of their high interannual infection incidence. Thirty five species of scleractinian <span class="hlt">corals</span> were affected by at least one disease and a high incidence of <span class="hlt">coral</span> diseases on the main <span class="hlt">reef</span> builders is documented. Bleaching was present in 34 species. During the whole monitoring period, Agaricia agaricites and Siderastrea siderea were the species most severely affected by DSD and bleaching, respectively. Diseases on species such as Agaricia fragilis, A. grahamae, A. humilis, Diploria clivosa, Eusmilia fastigiata, Millepora complanata, and Mycetophyllia aliciae are recorded for first time in Colombia. We present bleaching and disease incidences, kinds of diseases, <span class="hlt">coral</span> species affected, <span class="hlt">reef</span> localities studied, depth intervals of surveys, and temporal (years) variation for each geographic area. This variation makes difficult to clearly determine defined patterns or general trends for monitored <span class="hlt">reefs</span>. This is the first long-term study of <span class="hlt">coral</span> diseases and bleaching in the Southwestern Caribbean, and one of the few long</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26478453','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26478453"><span>The implications of recurrent disturbances within the world's hottest <span class="hlt">coral</span> <span class="hlt">reef</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bento, Rita; Hoey, Andrew S; Bauman, Andrew G; Feary, David A; Burt, John A</p> <p>2016-04-30</p> <p>Determining how <span class="hlt">coral</span> <span class="hlt">ecosystems</span> are structured within extreme environments may provide insights into how <span class="hlt">coral</span> <span class="hlt">reefs</span> are impacted by future climate change. Benthic community structure was examined within the Persian Gulf, and adjacent Musandam and northern Oman regions across a 3-year period (2008-2011) in which all regions were exposed to major disturbances. Although there was evidence of temporal switching in <span class="hlt">coral</span> composition within regions, communities predominantly reflected local environmental conditions and the disturbance history of each region. Gulf <span class="hlt">reefs</span> showed little change in <span class="hlt">coral</span> composition, being dominated by stress-tolerant Faviidae and Poritidae across the 3 years. In comparison, Musandam and Oman <span class="hlt">coral</span> communities were comprised of stress-sensitive Acroporidae and Pocilloporidae; Oman communities showed substantial declines in such taxa and increased cover of stress-tolerant communities. Our results suggest that <span class="hlt">coral</span> communities may persist within an increasingly disturbed future environment, albeit in a much more structurally simple configuration. Copyright © 2015 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://hdl.handle.net/2060/20180001321','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/20180001321"><span>NeMO-Net & Fluid Lensing: The Neural Multi-Modal Observation & Training Network for Global <span class="hlt">Coral</span> <span class="hlt">Reef</span> Assessment Using Fluid Lensing Augmentation of NASA EOS Data</span></a></p> <p><a target="_blank" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Chirayath, Ved</p> <p>2018-01-01</p> <p>We present preliminary results from NASA NeMO-Net, the first neural multi-modal observation and training network for global <span class="hlt">coral</span> <span class="hlt">reef</span> assessment. NeMO-Net is an open-source deep convolutional neural network (CNN) and interactive active learning training software in development which will assess the present and past dynamics of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. NeMO-Net exploits active learning and data fusion of mm-scale remotely sensed 3D images of <span class="hlt">coral</span> <span class="hlt">reefs</span> captured using fluid lensing with the NASA FluidCam instrument, presently the highest-resolution remote sensing benthic imaging technology capable of removing ocean wave distortion, as well as hyperspectral airborne remote sensing data from the ongoing NASA <span class="hlt">CORAL</span> mission and lower-resolution satellite data to determine <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> makeup globally at unprecedented spatial and temporal scales. Aquatic <span class="hlt">ecosystems</span>, particularly <span class="hlt">coral</span> <span class="hlt">reefs</span>, remain quantitatively misrepresented by low-resolution remote sensing as a result of refractive distortion from ocean waves, optical attenuation, and remoteness. Machine learning classification of <span class="hlt">coral</span> <span class="hlt">reefs</span> using FluidCam mm-scale 3D data show that present satellite and airborne remote sensing techniques poorly characterize <span class="hlt">coral</span> <span class="hlt">reef</span> percent living cover, morphology type, and species breakdown at the mm, cm, and meter scales. Indeed, current global assessments of <span class="hlt">coral</span> <span class="hlt">reef</span> cover and morphology classification based on km-scale satellite data alone can suffer from segmentation errors greater than 40%, capable of change detection only on yearly temporal scales and decameter spatial scales, significantly hindering our understanding of patterns and processes in marine biodiversity at a time when these <span class="hlt">ecosystems</span> are experiencing unprecedented anthropogenic pressures, ocean acidification, and sea surface temperature rise. NeMO-Net leverages our augmented machine learning algorithm that demonstrates data fusion of regional FluidCam (mm, cm-scale) airborne remote sensing with</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29608800','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29608800"><span>Morphological plasticity of the depth generalist <span class="hlt">coral</span>, Montastraea cavernosa, on mesophotic <span class="hlt">reefs</span> in Bermuda.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Goodbody-Gringley, Gretchen; Waletich, Justin</p> <p>2018-04-02</p> <p>Scleractinian <span class="hlt">corals</span> have global ecological, structural, social, and economic importance that is disproportionately large relative to their areal extent. These <span class="hlt">reef</span> building <span class="hlt">corals</span> form the architectural framework for shallow water tropical <span class="hlt">reef</span> systems, supporting the most productive and biologically diverse marine <span class="hlt">ecosystems</span> on Earth (Veron, 1995). <span class="hlt">Reef</span>-building scleractinian species are dependent on photosynthetic products supplied by symbiotic zooxanthellae of the genus Symbiodinium, restricting their distribution to the photic zone (Stambler, 2011). This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26573133','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26573133"><span>Oman's <span class="hlt">coral</span> <span class="hlt">reefs</span>: A unique <span class="hlt">ecosystem</span> challenged by natural and man-related stresses and in need of conservation.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Burt, J A; Coles, S; van Lavieren, H; Taylor, O; Looker, E; Samimi-Namin, K</p> <p>2016-04-30</p> <p>Oman contains diverse and abundant <span class="hlt">reef</span> <span class="hlt">coral</span> communities that extend along a coast that borders three environmentally distinct water bodies, with <span class="hlt">corals</span> existing under unique and often stressful environmental conditions. In recent years Oman's <span class="hlt">reefs</span> have undergone considerable change due to recurrent predatory starfish outbreaks, cyclone damage, harmful algal blooms, and other stressors. In this review we summarize current knowledge of the biology and status of <span class="hlt">corals</span> in Oman, particularly in light of recent stressors and projected future threats, and examine current <span class="hlt">reef</span> management practices. Oman's <span class="hlt">coral</span> communities occur in marginal environmental conditions for <span class="hlt">reefs</span>, and hence are quite vulnerable to anthropogenic effects. We recommend a focus on developing conservation-oriented <span class="hlt">coral</span> research to guide proactive management and expansion of the number and size of designated protected areas in Oman, particularly those associated with critical <span class="hlt">coral</span> habitat. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4511817','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4511817"><span>Integrating structure-from-motion photogrammetry with geospatial software as a novel technique for quantifying 3D ecological characteristics of <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Delparte, D; Gates, RD; Takabayashi, M</p> <p>2015-01-01</p> <p>The structural complexity of <span class="hlt">coral</span> <span class="hlt">reefs</span> plays a major role in the biodiversity, productivity, and overall functionality of <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Conventional metrics with 2-dimensional properties are inadequate for characterization of <span class="hlt">reef</span> structural complexity. A 3-dimensional (3D) approach can better quantify topography, rugosity and other structural characteristics that play an important role in the ecology of <span class="hlt">coral</span> <span class="hlt">reef</span> communities. Structure-from-Motion (SfM) is an emerging low-cost photogrammetric method for high-resolution 3D topographic reconstruction. This study utilized SfM 3D reconstruction software tools to create textured mesh models of a <span class="hlt">reef</span> at French Frigate Shoals, an atoll in the Northwestern Hawaiian Islands. The reconstructed orthophoto and digital elevation model were then integrated with geospatial software in order to quantify metrics pertaining to 3D complexity. The resulting data provided high-resolution physical properties of <span class="hlt">coral</span> colonies that were then combined with live cover to accurately characterize the <span class="hlt">reef</span> as a living structure. The 3D reconstruction of <span class="hlt">reef</span> structure and complexity can be integrated with other physiological and ecological parameters in future research to develop reliable <span class="hlt">ecosystem</span> models and improve capacity to monitor changes in the health and function of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. PMID:26207190</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_15");'>15</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li class="active"><span>17</span></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_17 --> <div id="page_18" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li class="active"><span>18</span></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="341"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3071368','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3071368"><span>Global Human Footprint on the Linkage between Biodiversity and <span class="hlt">Ecosystem</span> Functioning in <span class="hlt">Reef</span> Fishes</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Mora, Camilo; Aburto-Oropeza, Octavio; Ayala Bocos, Arturo; Ayotte, Paula M.; Banks, Stuart; Bauman, Andrew G.; Beger, Maria; Bessudo, Sandra; Booth, David J.; Brokovich, Eran; Brooks, Andrew; Chabanet, Pascale; Cinner, Joshua E.; Cortés, Jorge; Cruz-Motta, Juan J.; Cupul Magaña, Amilcar; DeMartini, Edward E.; Edgar, Graham J.; Feary, David A.; Ferse, Sebastian C. A.; Friedlander, Alan M.; Gaston, Kevin J.; Gough, Charlotte; Graham, Nicholas A. J.; Green, Alison; Guzman, Hector; Hardt, Marah; Kulbicki, Michel; Letourneur, Yves; López Pérez, Andres; Loreau, Michel; Loya, Yossi; Martinez, Camilo; Mascareñas-Osorio, Ismael; Morove, Tau; Nadon, Marc-Olivier; Nakamura, Yohei; Paredes, Gustavo; Polunin, Nicholas V. C.; Pratchett, Morgan S.; Reyes Bonilla, Héctor; Rivera, Fernando; Sala, Enric; Sandin, Stuart A.; Soler, German; Stuart-Smith, Rick; Tessier, Emmanuel; Tittensor, Derek P.; Tupper, Mark; Usseglio, Paolo; Vigliola, Laurent; Wantiez, Laurent; Williams, Ivor; Wilson, Shaun K.; Zapata, Fernando A.</p> <p>2011-01-01</p> <p>Difficulties in scaling up theoretical and experimental results have raised controversy over the consequences of biodiversity loss for the functioning of natural <span class="hlt">ecosystems</span>. Using a global survey of <span class="hlt">reef</span> fish assemblages, we show that in contrast to previous theoretical and experimental studies, <span class="hlt">ecosystem</span> functioning (as measured by standing biomass) scales in a non-saturating manner with biodiversity (as measured by species and functional richness) in this <span class="hlt">ecosystem</span>. Our field study also shows a significant and negative interaction between human population density and biodiversity on <span class="hlt">ecosystem</span> functioning (i.e., for the same human density there were larger reductions in standing biomass at more diverse <span class="hlt">reefs</span>). Human effects were found to be related to fishing, coastal development, and land use stressors, and currently affect over 75% of the world's <span class="hlt">coral</span> <span class="hlt">reefs</span>. Our results indicate that the consequences of biodiversity loss in <span class="hlt">coral</span> <span class="hlt">reefs</span> have been considerably underestimated based on existing knowledge and that <span class="hlt">reef</span> fish assemblages, particularly the most diverse, are greatly vulnerable to the expansion and intensity of anthropogenic stressors in coastal areas. PMID:21483714</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2008ECSS...80..435B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2008ECSS...80..435B"><span>Climate change and <span class="hlt">coral</span> <span class="hlt">reef</span> bleaching: An ecological assessment of long-term impacts, recovery trends and future outlook</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Baker, Andrew C.; Glynn, Peter W.; Riegl, Bernhard</p> <p>2008-12-01</p> <p>Since the early 1980s, episodes of <span class="hlt">coral</span> <span class="hlt">reef</span> bleaching and mortality, due primarily to climate-induced ocean warming, have occurred almost annually in one or more of the world's tropical or subtropical seas. Bleaching is episodic, with the most severe events typically accompanying coupled ocean-atmosphere phenomena, such as the El Niño-Southern Oscillation (ENSO), which result in sustained regional elevations of ocean temperature. Using this extended dataset (25+ years), we review the short- and long-term ecological impacts of <span class="hlt">coral</span> bleaching on <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, and quantitatively synthesize recovery data worldwide. Bleaching episodes have resulted in catastrophic loss of <span class="hlt">coral</span> cover in some locations, and have changed <span class="hlt">coral</span> community structure in many others, with a potentially critical influence on the maintenance of biodiversity in the marine tropics. Bleaching has also set the stage for other declines in <span class="hlt">reef</span> health, such as increases in <span class="hlt">coral</span> diseases, the breakdown of <span class="hlt">reef</span> framework by bioeroders, and the loss of critical habitat for associated <span class="hlt">reef</span> fishes and other biota. Secondary ecological effects, such as the concentration of predators on remnant surviving <span class="hlt">coral</span> populations, have also accelerated the pace of decline in some areas. Although bleaching severity and recovery have been variable across all spatial scales, some <span class="hlt">reefs</span> have experienced relatively rapid recovery from severe bleaching impacts. There has been a significant overall recovery of <span class="hlt">coral</span> cover in the Indian Ocean, where many <span class="hlt">reefs</span> were devastated by a single large bleaching event in 1998. In contrast, <span class="hlt">coral</span> cover on western Atlantic <span class="hlt">reefs</span> has generally continued to decline in response to multiple smaller bleaching events and a diverse set of chronic secondary stressors. No clear trends are apparent in the eastern Pacific, the central-southern-western Pacific or the Arabian Gulf, where some <span class="hlt">reefs</span> are recovering and others are not. The majority of survivors and new recruits on</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=321693&Lab=NHEERL&keyword=hi&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=321693&Lab=NHEERL&keyword=hi&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Developing a multi-stressor gradient for <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are often found near coastal waters where multiple anthropogenic stressors co-occur at areas of human disturbance. Developing <span class="hlt">coral</span> <span class="hlt">reef</span> biocriteria under the U.S. Clean Water Act requires relationships between anthropogenic stressors and <span class="hlt">coral</span> <span class="hlt">reef</span> condition to be es...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29206219','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29206219"><span>Long-term monitoring of <span class="hlt">coral</span> <span class="hlt">reef</span> fish assemblages in the Western central pacific.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Heenan, Adel; Williams, Ivor D; Acoba, Tomoko; DesRochers, Annette; Kosaki, Randall K; Kanemura, Troy; Nadon, Marc O; Brainard, Russell E</p> <p>2017-12-05</p> <p>Throughout the tropics, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, which are critically important to people, have been greatly altered by humans. Differentiating human impacts from natural drivers of <span class="hlt">ecosystem</span> state is essential to effective management. Here we present a dataset from a large-scale monitoring program that surveys <span class="hlt">coral</span> <span class="hlt">reef</span> fish assemblages and habitats encompassing the bulk of the US-affiliated tropical Pacific, and spanning wide gradients in both natural drivers and human impact. Currently, this includes >5,500 surveys from 39 islands and atolls in Hawaii (including the main and Northwestern Hawaiian Islands) and affiliated geo-political regions of American Samoa, the Commonwealth of the Northern Mariana Islands, Guam, and the Pacific Remote Islands Areas. The dataset spans 2010-2017, during which time, each region was visited at least every three years, and ~500-1,000 surveys performed annually. This standardised dataset is a powerful resource that can be used to understand how human, environmental and oceanographic conditions influence <span class="hlt">coral</span> <span class="hlt">reef</span> fish community structure and function, providing a basis for research to support effective management outcomes.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5716063','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5716063"><span>Long-term monitoring of <span class="hlt">coral</span> <span class="hlt">reef</span> fish assemblages in the Western central pacific</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Heenan, Adel; Williams, Ivor D.; Acoba, Tomoko; DesRochers, Annette; Kosaki, Randall K.; Kanemura, Troy; Nadon, Marc O.; Brainard, Russell E.</p> <p>2017-01-01</p> <p>Throughout the tropics, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, which are critically important to people, have been greatly altered by humans. Differentiating human impacts from natural drivers of <span class="hlt">ecosystem</span> state is essential to effective management. Here we present a dataset from a large-scale monitoring program that surveys <span class="hlt">coral</span> <span class="hlt">reef</span> fish assemblages and habitats encompassing the bulk of the US-affiliated tropical Pacific, and spanning wide gradients in both natural drivers and human impact. Currently, this includes >5,500 surveys from 39 islands and atolls in Hawaii (including the main and Northwestern Hawaiian Islands) and affiliated geo-political regions of American Samoa, the Commonwealth of the Northern Mariana Islands, Guam, and the Pacific Remote Islands Areas. The dataset spans 2010–2017, during which time, each region was visited at least every three years, and ~500–1,000 surveys performed annually. This standardised dataset is a powerful resource that can be used to understand how human, environmental and oceanographic conditions influence <span class="hlt">coral</span> <span class="hlt">reef</span> fish community structure and function, providing a basis for research to support effective management outcomes. PMID:29206219</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.usgs.gov/ofr/2016/1074/ofr20161074.pdf','USGSPUBS'); return false;" href="https://pubs.usgs.gov/ofr/2016/1074/ofr20161074.pdf"><span>The structure and composition of Holocene <span class="hlt">coral</span> <span class="hlt">reefs</span> in the Middle Florida Keys</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Toth, Lauren T.; Stathakopoulos, Anastasios; Kuffner, Ilsa B.</p> <p>2016-07-21</p> <p>The Florida Keys <span class="hlt">reef</span> tract (FKRT) is the largest <span class="hlt">coral-reef</span> <span class="hlt">ecosystem</span> in the continental United States. The modern FKRT extends for 362 kilometers along the coast of South Florida from Dry Tortugas National Park in the southwest, through the Florida Keys National Marine Sanctuary (FKNMS), to Fowey Rocks <span class="hlt">reef</span> in Biscayne National Park in the northeast. Most <span class="hlt">reefs</span> along the FKRT are sheltered by the exposed islands of the Florida Keys; however, large channels are located between the islands of the Middle Keys. These openings allow for tidal transport of water from Florida Bay onto <span class="hlt">reefs</span> in the area. The characteristics of the water masses coming from Florida Bay, which can experience broad swings in temperature, salinity, nutrients, and turbidity over short periods of time, are generally unfavorable or “inimical” to <span class="hlt">coral</span> growth and <span class="hlt">reef</span> development.Although <span class="hlt">reef</span> habitats are ubiquitous throughout most of the Upper and Lower Keys, relatively few modern <span class="hlt">reefs</span> exist in the Middle Keys most likely because of the impacts of inimical waters from Florida Bay. The <span class="hlt">reefs</span> that are present in the Middle Keys generally are poorly developed compared with <span class="hlt">reefs</span> elsewhere in the region. For example, Acropora palmata has been the dominant <span class="hlt">coral</span> on shallow-water <span class="hlt">reefs</span> in the Caribbean over the last 1.5 million years until populations of the <span class="hlt">coral</span> declined throughout the region in recent decades. Although A. palmata was historically abundant in the Florida Keys, it was conspicuously absent from <span class="hlt">reefs</span> in the Middle Keys. Instead, contemporary <span class="hlt">reefs</span> in the Middle Keys have been dominated by occasional massive (that is, boulder or head) <span class="hlt">corals</span> and, more often, small, non-<span class="hlt">reef</span>-building <span class="hlt">corals</span>.Holocene <span class="hlt">reef</span> cores have been collected from many locations along the FKRT; however, despite the potential importance of the history of <span class="hlt">reefs</span> in the Middle Florida Keys to our understanding of the environmental controls on <span class="hlt">reef</span> development throughout the FKRT, there are currently no published</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27905045','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27905045"><span>Differential response of <span class="hlt">coral</span> communities to Caulerpa spp. bloom in the <span class="hlt">reefs</span> of Indian Ocean.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Manikandan, B; Ravindran, J</p> <p>2017-02-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are disturbed in tandem by climatic and anthropogenic stressors. A number of factors act synergistically to reduce the live <span class="hlt">coral</span> cover and threaten the existence of <span class="hlt">reefs</span>. Continuous monitoring of the <span class="hlt">coral</span> communities during 2012-2014 captured an unprecedented growth of macroalgae as a bloom at Gulf of Mannar (GoM) and Palk Bay (PB) which are protected and unprotected <span class="hlt">reefs</span>, respectively. The two <span class="hlt">reefs</span> varying in their protection level enabled to conduct an assessment on the response of <span class="hlt">coral</span> communities and their recovery potential during and after the macroalgal bloom. Surveys in 2012 revealed a live <span class="hlt">coral</span> cover of 36.8 and 14.6% in GoM and PB, respectively. Live <span class="hlt">coral</span> cover was lost at an annual rate of 4% in PB due to the Caulerpa racemosa blooms that occurred in 2013 and 2014. In GoM, the loss of live <span class="hlt">coral</span> cover was estimated to be 16.5% due to C. taxifolia bloom in 2013. Tissue regeneration by the foliose and branching <span class="hlt">coral</span> morphotypes aided the recovery of live <span class="hlt">coral</span> cover in GoM, whereas the chances for the recovery of live <span class="hlt">coral</span> cover in PB <span class="hlt">reef</span> were low, primarily due to frequent algal blooms, and the existing live <span class="hlt">coral</span> cover was mainly due to the abundance of slow-growing massive <span class="hlt">corals</span>. In combination, results of this study suggested that the recovery of a <span class="hlt">coral</span> <span class="hlt">reef</span> after a macroalgal bloom largely depends on <span class="hlt">coral</span> species composition and the frequency of stress events. A further study linking macroalgal bloom to its specific cause is essential for the successful intervention and management.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/FR-2013-11-08/pdf/2013-26947.pdf','FEDREG'); return false;" href="https://www.gpo.gov/fdsys/pkg/FR-2013-11-08/pdf/2013-26947.pdf"><span>78 FR 67128 - <span class="hlt">Coral</span> <span class="hlt">Reef</span> Conservation Program; Meeting</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collection.action?collectionCode=FR">Federal Register 2010, 2011, 2012, 2013, 2014</a></p> <p></p> <p>2013-11-08</p> <p>... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration <span class="hlt">Coral</span> <span class="hlt">Reef</span> Conservation Program; Meeting AGENCY: <span class="hlt">Coral</span> <span class="hlt">Reef</span> Conservation Program, Office of Ocean and Coastal Resource Management... meeting of the U.S. <span class="hlt">Coral</span> <span class="hlt">Reef</span> Task Force (USCRTF). The meeting will be held in Christiansted, U.S. Virgin...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26975420','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26975420"><span>The Ecological Role of Sharks on <span class="hlt">Coral</span> <span class="hlt">Reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Roff, George; Doropoulos, Christopher; Rogers, Alice; Bozec, Yves-Marie; Krueck, Nils C; Aurellado, Eleanor; Priest, Mark; Birrell, Chico; Mumby, Peter J</p> <p>2016-05-01</p> <p>Sharks are considered the apex predator of <span class="hlt">coral</span> <span class="hlt">reefs</span>, but the consequences of their global depletion are uncertain. Here we explore the ecological roles of sharks on <span class="hlt">coral</span> <span class="hlt">reefs</span> and, conversely, the importance of <span class="hlt">reefs</span> for sharks. We find that most <span class="hlt">reef</span>-associated shark species do not act as apex predators but instead function as mesopredators along with a diverse group of <span class="hlt">reef</span> fish. While sharks perform important direct and indirect ecological roles, the evidence to support hypothesised shark-driven trophic cascades that benefit <span class="hlt">corals</span> is weak and equivocal. <span class="hlt">Coral</span> <span class="hlt">reefs</span> provide some functional benefits to sharks, but sharks do not appear to favour healthier <span class="hlt">reef</span> environments. Restoring populations of sharks is important and can yet deliver ecological surprise. Copyright © 2016 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4100925','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4100925"><span>Sediment and Turbidity Associated with Offshore Dredging Increase <span class="hlt">Coral</span> Disease Prevalence on Nearby <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Pollock, F. Joseph; Lamb, Joleah B.; Field, Stuart N.; Heron, Scott F.; Schaffelke, Britta; Shedrawi, George; Bourne, David G.; Willis, Bette L.</p> <p>2014-01-01</p> <p>In recent decades, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> have declined to the extent that <span class="hlt">reefs</span> are now threatened globally. While many water quality parameters have been proposed to contribute to <span class="hlt">reef</span> declines, little evidence exists conclusively linking specific water quality parameters with increased disease prevalence in situ. Here we report evidence from in situ <span class="hlt">coral</span> health surveys confirming that chronic exposure to dredging-associated sediment plumes significantly increase the prevalence of white syndromes, a devastating group of globally important <span class="hlt">coral</span> diseases. <span class="hlt">Coral</span> health surveys were conducted along a dredging-associated sediment plume gradient to assess the relationship between sedimentation, turbidity and <span class="hlt">coral</span> health. <span class="hlt">Reefs</span> exposed to the highest number of days under the sediment plume (296 to 347 days) had two-fold higher levels of disease, largely driven by a 2.5-fold increase in white syndromes, and a six-fold increase in other signs of compromised <span class="hlt">coral</span> health relative to <span class="hlt">reefs</span> with little or no plume exposure (0 to 9 days). Multivariate modeling and ordination incorporating sediment exposure level, <span class="hlt">coral</span> community composition and cover, predation and multiple thermal stress indices provided further confirmation that sediment plume exposure level was the main driver of elevated disease and other compromised <span class="hlt">coral</span> health indicators. This study provides the first evidence linking dredging-associated sedimentation and turbidity with elevated <span class="hlt">coral</span> disease prevalence in situ. Our results may help to explain observed increases in global <span class="hlt">coral</span> disease prevalence in recent decades and suggest that minimizing sedimentation and turbidity associated with coastal development will provide an important management tool for controlling <span class="hlt">coral</span> disease epizootics. PMID:25029525</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25029525','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25029525"><span>Sediment and turbidity associated with offshore dredging increase <span class="hlt">coral</span> disease prevalence on nearby <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Pollock, F Joseph; Lamb, Joleah B; Field, Stuart N; Heron, Scott F; Schaffelke, Britta; Shedrawi, George; Bourne, David G; Willis, Bette L</p> <p>2014-01-01</p> <p>In recent decades, <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> have declined to the extent that <span class="hlt">reefs</span> are now threatened globally. While many water quality parameters have been proposed to contribute to <span class="hlt">reef</span> declines, little evidence exists conclusively linking specific water quality parameters with increased disease prevalence in situ. Here we report evidence from in situ <span class="hlt">coral</span> health surveys confirming that chronic exposure to dredging-associated sediment plumes significantly increase the prevalence of white syndromes, a devastating group of globally important <span class="hlt">coral</span> diseases. <span class="hlt">Coral</span> health surveys were conducted along a dredging-associated sediment plume gradient to assess the relationship between sedimentation, turbidity and <span class="hlt">coral</span> health. <span class="hlt">Reefs</span> exposed to the highest number of days under the sediment plume (296 to 347 days) had two-fold higher levels of disease, largely driven by a 2.5-fold increase in white syndromes, and a six-fold increase in other signs of compromised <span class="hlt">coral</span> health relative to <span class="hlt">reefs</span> with little or no plume exposure (0 to 9 days). Multivariate modeling and ordination incorporating sediment exposure level, <span class="hlt">coral</span> community composition and cover, predation and multiple thermal stress indices provided further confirmation that sediment plume exposure level was the main driver of elevated disease and other compromised <span class="hlt">coral</span> health indicators. This study provides the first evidence linking dredging-associated sedimentation and turbidity with elevated <span class="hlt">coral</span> disease prevalence in situ. Our results may help to explain observed increases in global <span class="hlt">coral</span> disease prevalence in recent decades and suggest that minimizing sedimentation and turbidity associated with coastal development will provide an important management tool for controlling <span class="hlt">coral</span> disease epizootics.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22935521','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22935521"><span>Monitoring strategies for drill cutting discharge in the vicinity of cold-water <span class="hlt">coral</span> <span class="hlt">ecosystems</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Purser, Autun; Thomsen, Laurenz</p> <p>2012-11-01</p> <p>Cold-water <span class="hlt">coral</span> <span class="hlt">reefs</span> represent some of the most biodiverse and biomass rich <span class="hlt">ecosystems</span> in the marine environment. Despite this, <span class="hlt">ecosystem</span> functioning is still poorly understood and the susceptibility of key species to anthropogenic activities and pollutants is unknown. In European waters, cold-water <span class="hlt">corals</span> are often found in greatest abundance on the continental margin, often in regions rich in hydrocarbon reserves. In this viewpoint paper we discuss some of the current strategies employed in predicting and minimizing exposure of cold-water <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> on the Norwegian margin to waste materials produced during offshore drilling operations by the oil and gas industry. In the light of recent in situ and experimental research conducted with the key <span class="hlt">reef</span> species Lophelia pertusa, we present some possible improvements to these strategies which may be utilized by industry and managers to further reduce the likelihood of exposure. We further highlight important outstanding research questions in this field. Copyright © 2012 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35..681R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35..681R"><span>Spatial and seasonal <span class="hlt">reef</span> calcification in <span class="hlt">corals</span> and calcareous crusts in the central Red Sea</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Roik, Anna; Roder, Cornelia; Röthig, Till; Voolstra, Christian R.</p> <p>2016-06-01</p> <p>The existence of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> critically relies on the <span class="hlt">reef</span> carbonate framework produced by scleractinian <span class="hlt">corals</span> and calcareous crusts (i.e., crustose coralline algae). While the Red Sea harbors one of the longest connected <span class="hlt">reef</span> systems in the world, detailed calcification data are only available from the northernmost part. To fill this knowledge gap, we measured in situ calcification rates of primary and secondary <span class="hlt">reef</span> builders in the central Red Sea. We collected data on the major habitat-forming <span class="hlt">coral</span> genera Porites, Acropora, and Pocillopora and also on calcareous crusts (CC) in a spatio-seasonal framework. The scope of the study comprised sheltered and exposed sites of three <span class="hlt">reefs</span> along a cross-shelf gradient and over four seasons of the year. Calcification of all <span class="hlt">coral</span> genera was consistent across the shelf and highest in spring. In addition, Pocillopora showed increased calcification at exposed <span class="hlt">reef</span> sites. In contrast, CC calcification increased from nearshore, sheltered to offshore, exposed <span class="hlt">reef</span> sites, but also varied over seasons. Comparing our data to other <span class="hlt">reef</span> locations, calcification in the Red Sea was in the range of data collected from <span class="hlt">reefs</span> in the Caribbean and Indo-Pacific; however, Acropora calcification estimates were at the lower end of worldwide rates. Our study shows that the increasing <span class="hlt">coral</span> cover from nearshore to offshore environments aligned with CC calcification but not <span class="hlt">coral</span> calcification, highlighting the potentially important role of CC in structuring <span class="hlt">reef</span> cover and habitats. While <span class="hlt">coral</span> calcification maxima have been typically observed during summer in many <span class="hlt">reef</span> locations worldwide, calcification maxima during spring in the central Red Sea indicate that summer temperatures exceed the optima of <span class="hlt">reef</span> calcifiers in this region. This study provides a foundation for comparative efforts and sets a baseline to quantify impact of future environmental change in the central Red Sea.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2011AGUFM.B53D..03D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2011AGUFM.B53D..03D"><span>Detecting ecological change on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Dustan, P.</p> <p>2011-12-01</p> <p>Remote sensing offers the potential to observe the response of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> to environmental perturbations on a geographical scale not previously accessible. However, <span class="hlt">coral</span> <span class="hlt">reef</span> environments are optically, spatially, and temporally complex habitats which all present significant challenges for extracting meaningful information. Virtually every member of the <span class="hlt">reef</span> community possesses some degree of photosynthetic capability. The community thus generates a matrix of fine scale features with bio-optical signatures that blend as the scale of observation increases. Furthermore, to have any validity, the remotely sensed signal must be "calibrated" to the bio-optics of the <span class="hlt">reef</span>, a difficult and resource intensive process due to a convergence of photosynthetic light harvesting by green, red, and brown algal pigment systems. To make matters more complex, <span class="hlt">reefs</span> are overlain by a seawater skin with its own set of hydrological optical challenges. Rather than concentrating on classification, my research has attempted to track change by following the variation in geo-referenced pixel brightness over time with a technique termed temporal texture. Environmental periodicities impart a phenology to the variation in brightness and departures from the norm are easily detected as statistical outliers. This opens the door to using current orbiting technology to efficiently examine large areas of sea for change. If hot spots are detected, higher resolution sensors and field studies can be focused as resources permit. While this technique does not identify the type of change, it is sensitive, simple to compute, easy to automate and grounded in ecological niche theory</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.osti.gov/biblio/263045-coral-reefs-carbon-dioxide','SCIGOV-STC'); return false;" href="https://www.osti.gov/biblio/263045-coral-reefs-carbon-dioxide"><span><span class="hlt">Coral</span> <span class="hlt">reefs</span> and carbon dioxide</span></a></p> <p><a target="_blank" href="http://www.osti.gov/search">DOE Office of Scientific and Technical Information (OSTI.GOV)</a></p> <p>Buddemeier, R.W.</p> <p>1996-03-01</p> <p>This commentary argues the conclusion from a previous article, which investigates diurnal changes in carbon dioxide partial pressure and community metabolism on <span class="hlt">coral</span> <span class="hlt">reefs</span>, that <span class="hlt">coral</span> `<span class="hlt">reefs</span> might serve as a sink, not a source, for atmospheric carbon dioxide.` Commentaries from two groups are given along with the response by the original authors, Kayanne et al. 27 refs.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSPC54B2253S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSPC54B2253S"><span><span class="hlt">Reef</span> scent: How brooded <span class="hlt">coral</span> larvae from a tough <span class="hlt">coral</span> smell their way to a new home</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Spies, N.; Richmond, R. H.; Seneca, F.; Murphy, J.; Martinez, J.; Lyman, A.</p> <p>2016-02-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are highly diverse marine <span class="hlt">ecosystems</span> of ecological, economic, and cultural value. With the expected negative effects on <span class="hlt">reefs</span> from global climate change including rising sea temperatures and ocean acidification, the identification of resilient <span class="hlt">coral</span> species has become increasingly important. Leptastrea purpurea is an encrusting <span class="hlt">coral</span> that is found throughout the Indo-Pacific and Red Sea. While most <span class="hlt">corals</span> are broadcast spawners, releasing sperm and eggs to be fertilized in the water column, some <span class="hlt">corals</span> brood embryos within their tissues after internal fertilization. L. purpurea appears to release planula larvae on a continuous basis from the parent colony as observed during two years of monitoring. The planula larvae show remarkable resilience under a wide range of stressful conditions including temperature, sediment, and chemical stressors, as well as the ability to successfully settle and metamorphose after 180 days in controlled laboratory conditions. Various smells were tested to identify a settlement cue for L. purpurea larvae, and our results suggest that the smell associated with other <span class="hlt">coral</span> colonies induce larval settlement and metamorphosis. Knowledge of the settlement cues and reproductive biology of this <span class="hlt">coral</span> is important to our understanding of <span class="hlt">coral</span> resilience in the face of anthropogenic perturbation.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.usgs.gov/circ/1364/','USGSPUBS'); return false;" href="https://pubs.usgs.gov/circ/1364/"><span>Strategic Science for <span class="hlt">Coral</span> <span class="hlt">Ecosystems</span> 2007-2011</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>,</p> <p>2010-01-01</p> <p>Shallow and deep <span class="hlt">coral</span> <span class="hlt">ecosystems</span> are being imperiled by a combination of stressors. Climate change, unsustainable fishing practices, and disease are transforming <span class="hlt">coral</span> communities at regional to global scales. At local levels, excessive amounts of sediments, nutrients, and contaminants are also impacting the many benefits that healthy <span class="hlt">coral</span> <span class="hlt">ecosystems</span> provide. This Plan, Strategic Science for <span class="hlt">Coral</span> <span class="hlt">Ecosystems</span>, describes the information needs of resource managers and summarizes current research being conducted by U.S. Geological Survey (USGS) scientists and partners. It outlines important research actions that need to be undertaken over the next five years to achieve more accurate forecasting of future conditions and develop more effective decision-support tools to adaptively manage <span class="hlt">coral</span> <span class="hlt">ecosystems</span>. The overarching outcome of this Plan, if fully implemented, would be in transferring relevant knowledge to decision-makers, enabling them to better protect and sustain <span class="hlt">coral</span> <span class="hlt">ecosystem</span> services. These services include sources of food, essential habitat for fisheries and protected species, protection of coastlines from wave damage and erosion, recreation, and cultural values for indigenous communities. The USGS has a long history of research and monitoring experience in studying ancient and living <span class="hlt">coral</span> communities and serving many stakeholders. The research actions in this Plan build on the USGS legacy of conducting integrated multidisciplinary science to address complex environmental issues. This Plan is responsive to Federal legislation and authorities and a variety of external and internal drivers that include the President's Ocean Action Plan, the recommendations of the <span class="hlt">Coral</span> <span class="hlt">Reef</span> Task Force, the information needs of Bureaus in the Department of Interior, the USGS Bureau Science Strategy (USGS 2007) and the formal plans of several USGS Programs. To achieve this Plan's desired outcomes will require increased funding and more effective coordination and collaboration</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014CorRe..33..421B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014CorRe..33..421B"><span>Micro-topography mediates interactions between <span class="hlt">corals</span>, algae, and herbivorous fishes on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Brandl, S. J.; Hoey, A. S.; Bellwood, D. R.</p> <p>2014-06-01</p> <p>Processes occurring during the early life stages of <span class="hlt">corals</span> are important for the replenishment of <span class="hlt">coral</span> assemblages and the resilience of <span class="hlt">coral</span> <span class="hlt">reefs</span>. However, the factors influencing early life stages of <span class="hlt">corals</span> are not well understood, and the role of micro-topographic complexity for habitat associations of juvenile <span class="hlt">corals</span> is largely unexplored. This study investigated the microhabitat distribution patterns of early life stages of <span class="hlt">corals</span> and a potential macroalgal competitor ( Turbinaria ornata) across two <span class="hlt">reef</span> zones (<span class="hlt">reef</span> crest and outer <span class="hlt">reef</span> flat) on Lizard Island, Great Barrier <span class="hlt">Reef</span>. In both <span class="hlt">reef</span> zones, both <span class="hlt">corals</span> and T. ornata were significantly more abundant in concealed microhabitats than in semi-concealed or open microhabitats (GLMM: P < 0.001). The prevalence of juvenile <span class="hlt">corals</span> and T. ornata within concealed environments suggests that they might be effective refuges from grazing by herbivorous fishes. The density of juvenile <span class="hlt">corals</span> was positively related, and density of T. ornata negatively related to the abundance of two groups of herbivorous fishes, pairing rabbitfishes, and surgeonfishes in the genus Zebrasoma (BEST ENV-BIO: r s = 0.72, P < 0.01), which feed in concealed microhabitats. This correlative evidence suggests that crevices may be important for early life stages of both <span class="hlt">coral</span> and macroalgae, and that a specific suite of crevice-feeding fishes may influence benthic community dynamics in these microhabitats.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26245147','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26245147"><span>Resource partitioning along multiple niche axes drives functional diversity in parrotfishes on Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Adam, Thomas C; Kelley, Megan; Ruttenberg, Benjamin I; Burkepile, Deron E</p> <p>2015-12-01</p> <p>The recent loss of key consumers to exploitation and habitat degradation has significantly altered community dynamics and <span class="hlt">ecosystem</span> function across many <span class="hlt">ecosystems</span> worldwide. Predicting the impacts of consumer losses requires knowing the level of functional diversity that exists within a consumer assemblage. In this study, we document functional diversity among nine species of parrotfishes on Caribbean <span class="hlt">coral</span> <span class="hlt">reefs</span>. Parrotfishes are key herbivores that facilitate the maintenance and recovery of <span class="hlt">coral</span>-dominated <span class="hlt">reefs</span> by controlling algae and provisioning space for the recruitment of <span class="hlt">corals</span>. We observed large functional differences among two genera of parrotfishes that were driven by differences in diet. Fishes in the genus Scarus targeted filamentous algal turf assemblages, crustose coralline algae, and endolithic algae and avoided macroalgae, while fishes in the genus Sparisoma preferentially targeted macroalgae. However, species with similar diets were dissimilar in other attributes, including the habitats they frequented, the types of substrate they fed from, and the spatial scale at which they foraged. These differences indicate that species that appear to be functionally redundant when looking at diet alone exhibit high levels of complementarity when we consider multiple functional traits. By identifying key functional differences among parrotfishes, we provide critical information needed to manage parrotfishes to enhance the resilience of <span class="hlt">coral</span>-dominated <span class="hlt">reefs</span> and reverse phase shifts on algal-dominated <span class="hlt">reefs</span> throughout the wider Caribbean. Further, our study provides a framework for predicting the impacts of consumer losses in other species rich <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70037692','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70037692"><span>Holocene aggradation of the Dry Tortugas <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span></span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Brock, J.C.; Palaseanu-Lovejoy, M.; Poore, R.Z.; Nayegandhi, A.; Wright, C.W.</p> <p>2010-01-01</p> <p>Radiometric age dating of <span class="hlt">reef</span> cores acquired at the Dry Tortugas <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span> (DTCRE) was merged with lidar topographic mapping to examine Holocene <span class="hlt">reef</span> development linked to spatial variation in growth and erosion under the control of sea level. Analysis of variance of lidar topography confirmed the presence of three distinct terraces on all three major DTCRE banks (Loggerhead Bank, Garden Bank, and Pulaski Bank). <span class="hlt">Reef</span> building on the middle terrace (T2) began atop Pleistocene edifices on Loggerhead Bank by 8.0 ka (thousands of years ago) and on Garden Bank by 7.2 ka at elevations of about −16.0 m and −11.9 m, respectively, relative to present mean sea level. Following this initiation at different elevations, T2 aggraded vertically on both banks at different rates during the early Holocene under foundering conditions until a highstand at 5.2 ka, resulting in a 2.21 m offset in present mean T2 elevation between these banks. Initiation of an upper terrace (T1) occurred on both Loggerhead Bank and Garden Bank in association with sea-level fall to a lowstand at near 4.8 ka. This upper terrace initiated on Garden Bank at about 5.0 ka and then grew upward at rate of 2.5 mm year−1 until approximately 3.8 ka. On Loggerhead Bank, the upper T1 terrace formed after 4.5 ka at a higher vertical aggradation rate of 4.1 mm year−1, but at a lower elevation than on Garden Bank. Terrace T1 aggraded on Loggerhead Bank below the elevation of lowstands during late Holocene sea-level oscillation, and consequently erosion on Loggerhead Bank was minimal and likely limited to the crest of the upper terrace. In contrast, after 3.8 ka terrace T1 on Garden Bank likely tracked sea level and consequently underwent erosion when sea level fell to second, third and fourth lowstands at 3.3, 1.1, and 0.3 ka.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_16");'>16</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li class="active"><span>18</span></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_18 --> <div id="page_19" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li class="active"><span>19</span></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="361"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26234736','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26234736"><span>Global inequities between polluters and the polluted: climate change impacts on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Wolff, Nicholas H; Donner, Simon D; Cao, Long; Iglesias-Prieto, Roberto; Sale, Peter F; Mumby, Peter J</p> <p>2015-11-01</p> <p>For many <span class="hlt">ecosystem</span> services, it remains uncertain whether the impacts of climate change will be mostly negative or positive and how these changes will be geographically distributed. These unknowns hamper the identification of regional winners and losers, which can influence debate over climate policy. Here, we use <span class="hlt">coral</span> <span class="hlt">reefs</span> to explore the spatial variability of climate stress by modelling the ecological impacts of rising sea temperatures and ocean acidification, two important <span class="hlt">coral</span> stressors associated with increasing greenhouse gas (GHG) emissions. We then combine these results with national per capita emissions to quantify inequities arising from the distribution of cause (CO2 emissions) and effect (stress upon <span class="hlt">reefs</span>) among <span class="hlt">coral</span> <span class="hlt">reef</span> countries. We find pollution and <span class="hlt">coral</span> stress are spatially decoupled, creating substantial inequity of impacts as a function of emissions. We then consider the implications of such inequity for international climate policy. Targets for GHG reductions are likely to be tied to a country's emissions. Yet within a given level of GHG emissions, our analysis reveals that some countries experience relatively high levels of impact and will likely experience greater financial cost in terms of lost <span class="hlt">ecosystem</span> productivity and more extensive adaptation measures. We suggest countries so disadvantaged be given access to international adaptation funds proportionate with impacts to their <span class="hlt">ecosystem</span>. We raise the idea that funds could be more equitably allocated by formally including a metric of equity within a vulnerability framework. © 2015 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29021175','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29021175"><span>Species identity and depth predict bleaching severity in <span class="hlt">reef</span>-building <span class="hlt">corals</span>: shall the deep inherit the <span class="hlt">reef</span>?</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Muir, Paul R; Marshall, Paul A; Abdulla, Ameer; Aguirre, J David</p> <p>2017-10-11</p> <p>Mass bleaching associated with unusually high sea temperatures represents one of the greatest threats to <span class="hlt">corals</span> and <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Deeper <span class="hlt">reef</span> areas are hypothesized as potential refugia, but the susceptibility of Scleractinian species over depth has not been quantified. During the most severe bleaching event on record, we found up to 83% of <span class="hlt">coral</span> cover severely affected on Maldivian <span class="hlt">reefs</span> at a depth of 3-5 m, but significantly reduced effects at 24-30 m. Analysis of 153 species' responses showed depth, shading and species identity had strong, significant effects on susceptibility. Overall, 73.3% of the shallow-<span class="hlt">reef</span> assemblage had individuals at a depth of 24-30 m with reduced effects, potentially mitigating local extinction and providing a source of recruits for population recovery. Although susceptibility was phylogenetically constrained, species-level effects caused most lineages to contain some partially resistant species. Many genera showed wide variation between species, including Acropora, previously considered highly susceptible. Extinction risk estimates showed species and lineages of concern and those likely to dominate following repeated events. Our results show that deeper <span class="hlt">reef</span> areas provide refuge for a large proportion of Scleractinian species during severe bleaching events and that the deepest occurring individuals of each population have the greatest potential to survive and drive <span class="hlt">reef</span> recovery. © 2017 The Author(s).</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27460792','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27460792"><span>The Microbial Signature Provides Insight into the Mechanistic Basis of <span class="hlt">Coral</span> Success across <span class="hlt">Reef</span> Habitats.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hernandez-Agreda, Alejandra; Leggat, William; Bongaerts, Pim; Ainsworth, Tracy D</p> <p>2016-07-26</p> <p>For <span class="hlt">ecosystems</span> vulnerable to environmental change, understanding the spatiotemporal stability of functionally crucial symbioses is fundamental to determining the mechanisms by which these <span class="hlt">ecosystems</span> may persist. The <span class="hlt">coral</span> Pachyseris speciosa is a successful environmental generalist that succeeds in diverse <span class="hlt">reef</span> habitats. The generalist nature of this <span class="hlt">coral</span> suggests it may have the capacity to form functionally significant microbial partnerships to facilitate access to a range of nutritional sources within different habitats. Here, we propose that <span class="hlt">coral</span> is a metaorganism hosting three functionally distinct microbial interactions: a ubiquitous core microbiome of very few symbiotic host-selected bacteria, a microbiome of spatially and/or regionally explicit core microbes filling functional niches (<100 phylotypes), and a highly variable bacterial community that is responsive to biotic and abiotic processes across spatial and temporal scales (>100,000 phylotypes). We find that this <span class="hlt">coral</span> hosts upwards of 170,000 distinct phylotypes and provide evidence for the persistence of a select group of bacteria in <span class="hlt">corals</span> across environmental habitats of the Great Barrier <span class="hlt">Reef</span> and <span class="hlt">Coral</span> Sea. We further show that a higher number of bacteria are consistently associated with <span class="hlt">corals</span> on mesophotic <span class="hlt">reefs</span> than on shallow <span class="hlt">reefs</span>. An increase in microbial diversity with depth suggests reliance by this <span class="hlt">coral</span> on bacteria for nutrient acquisition on <span class="hlt">reefs</span> exposed to nutrient upwelling. Understanding the complex microbial communities of host organisms across broad biotic and abiotic environments as functionally distinct microbiomes can provide insight into those interactions that are ubiquitous niche symbioses and those that provide competitive advantage within the hosts' environment. <span class="hlt">Corals</span> have been proposed as the most diverse microbial biosphere. The high variability of microbial communities has hampered the identification of bacteria playing key functional roles that contribute to <span class="hlt">coral</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5136584','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5136584"><span>Natural bounds on herbivorous <span class="hlt">coral</span> <span class="hlt">reef</span> fishes</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Hoey, Andrew S.; Williams, Gareth J.; Williams, Ivor D.</p> <p>2016-01-01</p> <p>Humans are an increasingly dominant driver of Earth's biological communities, but differentiating human impacts from natural drivers of <span class="hlt">ecosystem</span> state is crucial. Herbivorous fish play a key role in maintaining <span class="hlt">coral</span> dominance on <span class="hlt">coral</span> <span class="hlt">reefs</span>, and are widely affected by human activities, principally fishing. We assess the relative importance of human and biophysical (habitat and oceanographic) drivers on the biomass of five herbivorous functional groups among 33 islands in the central and western Pacific Ocean. Human impacts were clear for some, but not all, herbivore groups. Biomass of browsers, large excavators, and of all herbivores combined declined rapidly with increasing human population density, whereas grazers, scrapers, and detritivores displayed no relationship. Sea-surface temperature had significant but opposing effects on the biomass of detritivores (positive) and browsers (negative). Similarly, the biomass of scrapers, grazers, and detritivores correlated with habitat structural complexity; however, relationships were group specific. Finally, the biomass of browsers and large excavators was related to island geomorphology, both peaking on low-lying islands and atolls. The substantial variability in herbivore populations explained by natural biophysical drivers highlights the need for locally appropriate management targets on <span class="hlt">coral</span> <span class="hlt">reefs</span>. PMID:27881745</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27881745','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27881745"><span>Natural bounds on herbivorous <span class="hlt">coral</span> <span class="hlt">reef</span> fishes.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Heenan, Adel; Hoey, Andrew S; Williams, Gareth J; Williams, Ivor D</p> <p>2016-11-30</p> <p>Humans are an increasingly dominant driver of Earth's biological communities, but differentiating human impacts from natural drivers of <span class="hlt">ecosystem</span> state is crucial. Herbivorous fish play a key role in maintaining <span class="hlt">coral</span> dominance on <span class="hlt">coral</span> <span class="hlt">reefs</span>, and are widely affected by human activities, principally fishing. We assess the relative importance of human and biophysical (habitat and oceanographic) drivers on the biomass of five herbivorous functional groups among 33 islands in the central and western Pacific Ocean. Human impacts were clear for some, but not all, herbivore groups. Biomass of browsers, large excavators, and of all herbivores combined declined rapidly with increasing human population density, whereas grazers, scrapers, and detritivores displayed no relationship. Sea-surface temperature had significant but opposing effects on the biomass of detritivores (positive) and browsers (negative). Similarly, the biomass of scrapers, grazers, and detritivores correlated with habitat structural complexity; however, relationships were group specific. Finally, the biomass of browsers and large excavators was related to island geomorphology, both peaking on low-lying islands and atolls. The substantial variability in herbivore populations explained by natural biophysical drivers highlights the need for locally appropriate management targets on <span class="hlt">coral</span> <span class="hlt">reefs</span>. © 2016 The Authors.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3709493','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3709493"><span>Human deforestation outweighs future climate change impacts of sedimentation on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Maina, Joseph; de Moel, Hans; Zinke, Jens; Madin, Joshua; McClanahan, Tim; Vermaat, Jan E.</p> <p>2013-01-01</p> <p>Near-shore <span class="hlt">coral</span> <span class="hlt">reef</span> systems are experiencing increased sediment supply due to conversion of forests to other land uses. Counteracting increased sediment loads requires an understanding of the relationship between forest cover and sediment supply, and how this relationship might change in the future. Here we study this relationship by simulating river flow and sediment supply in four watersheds that are adjacent to Madagascar’s major <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> for a range of future climate change projections and land-use change scenarios. We show that by 2090, all four watersheds are predicted to experience temperature increases and/or precipitation declines that, when combined, result in decreases in river flow and sediment load. However, these climate change-driven declines are outweighed by the impact of deforestation. Consequently, our analyses suggest that regional land-use management is more important than mediating climate change for influencing sedimentation of Malagasy <span class="hlt">coral</span> <span class="hlt">reefs</span>. PMID:23736941</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23736941','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23736941"><span>Human deforestation outweighs future climate change impacts of sedimentation on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Maina, Joseph; de Moel, Hans; Zinke, Jens; Madin, Joshua; McClanahan, Tim; Vermaat, Jan E</p> <p>2013-01-01</p> <p>Near-shore <span class="hlt">coral</span> <span class="hlt">reef</span> systems are experiencing increased sediment supply due to conversion of forests to other land uses. Counteracting increased sediment loads requires an understanding of the relationship between forest cover and sediment supply, and how this relationship might change in the future. Here we study this relationship by simulating river flow and sediment supply in four watersheds that are adjacent to Madagascar's major <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> for a range of future climate change projections and land-use change scenarios. We show that by 2090, all four watersheds are predicted to experience temperature increases and/or precipitation declines that, when combined, result in decreases in river flow and sediment load. However, these climate change-driven declines are outweighed by the impact of deforestation. Consequently, our analyses suggest that regional land-use management is more important than mediating climate change for influencing sedimentation of Malagasy <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://eric.ed.gov/?q=coral+AND+reefs&pg=3&id=ED265063','ERIC'); return false;" href="https://eric.ed.gov/?q=coral+AND+reefs&pg=3&id=ED265063"><span><span class="hlt">Coral</span> <span class="hlt">Reefs</span>: A Gallery Program, Grades 7-12.</span></a></p> <p><a target="_blank" href="http://www.eric.ed.gov/ERICWebPortal/search/extended.jsp?_pageLabel=advanced">ERIC Educational Resources Information Center</a></p> <p>National Aquarium in Baltimore, MD. Dept. of Education.</p> <p></p> <p>Gallery classes at the National Aquarium in Baltimore give the opportunity to study specific aquarium exhibits which demonstrate entire natural habitats. The <span class="hlt">coral</span> <span class="hlt">reef</span> gallery class features the gigantic western Atlantic <span class="hlt">coral</span> <span class="hlt">reef</span> (325,000 gallons) with over 1,000 fish. The exhibit simulates a typical Caribbean <span class="hlt">coral</span> <span class="hlt">reef</span> and nearby sandy…</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26940983','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26940983"><span>A <span class="hlt">coral</span>-on-a-chip microfluidic platform enabling live-imaging microscopy of <span class="hlt">reef</span>-building <span class="hlt">corals</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Shapiro, Orr H; Kramarsky-Winter, Esti; Gavish, Assaf R; Stocker, Roman; Vardi, Assaf</p> <p>2016-03-04</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span>, and the unique <span class="hlt">ecosystems</span> they support, are facing severe threats by human activities and climate change. Our understanding of these threats is hampered by the lack of robust approaches for studying the micro-scale interactions between <span class="hlt">corals</span> and their environment. Here we present an experimental platform, <span class="hlt">coral</span>-on-a-chip, combining micropropagation and microfluidics to allow direct microscopic study of live <span class="hlt">coral</span> polyps. The small and transparent <span class="hlt">coral</span> micropropagates are ideally suited for live-imaging microscopy, while the microfluidic platform facilitates long-term visualization under controlled environmental conditions. We demonstrate the usefulness of this approach by imaging <span class="hlt">coral</span> micropropagates at previously unattainable spatio-temporal resolutions, providing new insights into several micro-scale processes including <span class="hlt">coral</span> calcification, <span class="hlt">coral</span>-pathogen interaction and the loss of algal symbionts (<span class="hlt">coral</span> bleaching). <span class="hlt">Coral</span>-on-a-chip thus provides a powerful method for studying <span class="hlt">coral</span> physiology in vivo at the micro-scale, opening new vistas in <span class="hlt">coral</span> biology.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=175363&keyword=climate+AND+change+AND+ocean&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=175363&keyword=climate+AND+change+AND+ocean&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>DEVELOPMENT AND IMPLEMENTATION OF <span class="hlt">CORAL</span> <span class="hlt">REEF</span> BIOCRITERIA IN U.S. JURISDICTIONS</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>U.S. <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> are threatened by a variety of anthropogenic activities (e.g., pollution, over fishing, vessel groundings, excess nutrients, coastal development, etc.), natural stressors (e.g., tropical storms), and natural stressors that have been exacerbated by anth...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29610704','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29610704"><span>The importance of sponges and mangroves in supporting fish communities on degraded <span class="hlt">coral</span> <span class="hlt">reefs</span> in Caribbean Panama.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Seemann, Janina; Yingst, Alexandra; Stuart-Smith, Rick D; Edgar, Graham J; Altieri, Andrew H</p> <p>2018-01-01</p> <p>Fish communities associated with <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide are threatened by habitat degradation and overexploitation. We assessed <span class="hlt">coral</span> <span class="hlt">reefs</span>, mangrove fringes, and seagrass meadows on the Caribbean coast of Panama to explore the influences of their proximity to one another, habitat cover, and environmental characteristics in sustaining biomass, species richness and trophic structure of fish communities in a degraded tropical <span class="hlt">ecosystem</span>. We found 94% of all fish across all habitat types were of small body size (≤10 cm), with communities dominated by fishes that usually live in habitats of low complexity, such as Pomacentridae (damselfishes) and Gobiidae (gobies). Total fish biomass was very low, with the trend of small fishes from low trophic levels over-represented, and top predators under-represented, relative to <span class="hlt">coral</span> <span class="hlt">reefs</span> elsewhere in the Caribbean. For example, herbivorous fishes comprised 27% of total fish biomass in Panama relative to 10% in the wider Caribbean, and the small parrotfish Scarus iseri comprised 72% of the parrotfish biomass. We found evidence that non-<span class="hlt">coral</span> biogenic habitats support <span class="hlt">reef</span>-associated fish communities. In particular, the abundance of sponges on a given <span class="hlt">reef</span> and proximity of mangroves were found to be important positive correlates of <span class="hlt">reef</span> fish species richness, biomass, abundance and trophic structure. Our study indicates that a diverse fish community can persist on degraded <span class="hlt">coral</span> <span class="hlt">reefs</span>, and that the availability and arrangement within the seascape of other habitat-forming organisms, including sponges and mangroves, is critical to the maintenance of functional processes in such <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5878927','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5878927"><span>The importance of sponges and mangroves in supporting fish communities on degraded <span class="hlt">coral</span> <span class="hlt">reefs</span> in Caribbean Panama</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Yingst, Alexandra; Stuart-Smith, Rick D.; Edgar, Graham J.; Altieri, Andrew H.</p> <p>2018-01-01</p> <p>Fish communities associated with <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide are threatened by habitat degradation and overexploitation. We assessed <span class="hlt">coral</span> <span class="hlt">reefs</span>, mangrove fringes, and seagrass meadows on the Caribbean coast of Panama to explore the influences of their proximity to one another, habitat cover, and environmental characteristics in sustaining biomass, species richness and trophic structure of fish communities in a degraded tropical <span class="hlt">ecosystem</span>. We found 94% of all fish across all habitat types were of small body size (≤10 cm), with communities dominated by fishes that usually live in habitats of low complexity, such as Pomacentridae (damselfishes) and Gobiidae (gobies). Total fish biomass was very low, with the trend of small fishes from low trophic levels over-represented, and top predators under-represented, relative to <span class="hlt">coral</span> <span class="hlt">reefs</span> elsewhere in the Caribbean. For example, herbivorous fishes comprised 27% of total fish biomass in Panama relative to 10% in the wider Caribbean, and the small parrotfish Scarus iseri comprised 72% of the parrotfish biomass. We found evidence that non-<span class="hlt">coral</span> biogenic habitats support <span class="hlt">reef</span>-associated fish communities. In particular, the abundance of sponges on a given <span class="hlt">reef</span> and proximity of mangroves were found to be important positive correlates of <span class="hlt">reef</span> fish species richness, biomass, abundance and trophic structure. Our study indicates that a diverse fish community can persist on degraded <span class="hlt">coral</span> <span class="hlt">reefs</span>, and that the availability and arrangement within the seascape of other habitat-forming organisms, including sponges and mangroves, is critical to the maintenance of functional processes in such <span class="hlt">ecosystems</span>. PMID:29610704</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4077760','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4077760"><span><span class="hlt">Coral</span> <span class="hlt">Reef</span> Community Composition in the Context of Disturbance History on the Great Barrier <span class="hlt">Reef</span>, Australia</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Graham, Nicholas A. J.; Chong-Seng, Karen M.; Huchery, Cindy; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.</p> <p>2014-01-01</p> <p>Much research on <span class="hlt">coral</span> <span class="hlt">reefs</span> has documented differential declines in <span class="hlt">coral</span> and associated organisms. In order to contextualise this general degradation, research on community composition is necessary in the context of varied disturbance histories and the biological processes and physical features thought to retard or promote recovery. We conducted a spatial assessment of <span class="hlt">coral</span> <span class="hlt">reef</span> communities across five <span class="hlt">reefs</span> of the central Great Barrier <span class="hlt">Reef</span>, Australia, with known disturbance histories, and assessed patterns of <span class="hlt">coral</span> cover and community composition related to a range of other variables thought to be important for <span class="hlt">reef</span> dynamics. Two of the <span class="hlt">reefs</span> had not been extensively disturbed for at least 15 years prior to the surveys. Three of the <span class="hlt">reefs</span> had been severely impacted by crown-of-thorns starfish outbreaks and <span class="hlt">coral</span> bleaching approximately a decade before the surveys, from which only one of them was showing signs of recovery based on independent surveys. We incorporated wave exposure (sheltered and exposed) and <span class="hlt">reef</span> zone (slope, crest and flat) into our design, providing a comprehensive assessment of the spatial patterns in community composition on these <span class="hlt">reefs</span>. Categorising <span class="hlt">corals</span> into life history groupings, we document major <span class="hlt">coral</span> community differences in the unrecovered <span class="hlt">reefs</span>, compared to the composition and covers found on the undisturbed <span class="hlt">reefs</span>. The recovered <span class="hlt">reef</span>, despite having similar <span class="hlt">coral</span> cover, had a different community composition from the undisturbed <span class="hlt">reefs</span>, which may indicate slow successional processes, or a different natural community dominance pattern due to hydrology and other oceanographic factors. The variables that best correlated with patterns in the <span class="hlt">coral</span> community among sites included the density of juvenile <span class="hlt">corals</span>, herbivore fish biomass, fish species richness and the cover of macroalgae. Given increasing impacts to the Great Barrier <span class="hlt">Reef</span>, efforts to mitigate local stressors will be imperative to encouraging <span class="hlt">coral</span> communities to persist into</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21423742','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21423742"><span>Disturbance and the dynamics of <span class="hlt">coral</span> cover on the Great Barrier <span class="hlt">Reef</span> (1995-2009).</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Osborne, Kate; Dolman, Andrew M; Burgess, Scott C; Johns, Kerryn A</p> <p>2011-03-10</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> worldwide are under pressure from chronic and acute stressors that threaten their continued existence. Most obvious among changes to <span class="hlt">reefs</span> is loss of hard <span class="hlt">coral</span> cover, but a precise multi-scale estimate of <span class="hlt">coral</span> cover dynamics for the Great Barrier <span class="hlt">Reef</span> (GBR) is currently lacking. Monitoring data collected annually from fixed sites at 47 <span class="hlt">reefs</span> across 1300 km of the GBR indicate that overall regional <span class="hlt">coral</span> cover was stable (averaging 29% and ranging from 23% to 33% cover across years) with no net decline between 1995 and 2009. Subregional trends (10-100 km) in hard <span class="hlt">coral</span> were diverse with some being very dynamic and others changing little. <span class="hlt">Coral</span> cover increased in six subregions and decreased in seven subregions. Persistent decline of <span class="hlt">corals</span> occurred in one subregion for hard <span class="hlt">coral</span> and Acroporidae and in four subregions in non-Acroporidae families. Change in Acroporidae accounted for 68% of change in hard <span class="hlt">coral</span>. Crown-of-thorns starfish (Acanthaster planci) outbreaks and storm damage were responsible for more <span class="hlt">coral</span> loss during this period than either bleaching or disease despite two mass bleaching events and an increase in the incidence of <span class="hlt">coral</span> disease. While the limited data for the GBR prior to the 1980's suggests that <span class="hlt">coral</span> cover was higher than in our survey, we found no evidence of consistent, system-wide decline in <span class="hlt">coral</span> cover since 1995. Instead, fluctuations in <span class="hlt">coral</span> cover at subregional scales (10-100 km), driven mostly by changes in fast-growing Acroporidae, occurred as a result of localized disturbance events and subsequent recovery.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AcO....72...62C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AcO....72...62C"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> monitoring in the Iles Eparses, Mozambique Channel (2011-2013)</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Chabanet, P.; Bigot, L.; Nicet, J.-B.; Durville, P.; Massé, L.; Mulochau, T.; Russo, C.; Tessier, E.; Obura, D.</p> <p>2016-04-01</p> <p>Monitoring of <span class="hlt">coral</span> <span class="hlt">reefs</span> has become a major tool for understanding how they are changing, and for managing them in a context of increasing degradation of coastal <span class="hlt">ecosystems</span>. The Global <span class="hlt">Coral</span> <span class="hlt">Reef</span> Monitoring Network (GCRMN) has near-global coverage, but there are few remote sites free of direct human impact that can serve as reference sites. This study provides baseline data for the French Iles Eparses in the Mozambique Channel, Western Indian Ocean (WIO), whose <span class="hlt">coral</span> <span class="hlt">reefs</span> are little known owing to their limited accessibility, and have been free from fishing pressure for over 20 years. Surveys of <span class="hlt">coral</span> <span class="hlt">reef</span> health and fish community structure were undertaken at four of the islands (Europa, Bassas da India, Juan de Nova and Glorieuses) in 2011-2013. Monitoring was conducted using standardized GCRMN methods for benthos and fish communities, at the highest taxonomic level. Benthic cover showed a latitudinal gradient, with higher <span class="hlt">coral</span> cover and conversely lower algae cover (60% and 14% respectively) in the south of the Mozambique Channel. This could be due to the geomorphology of the islands, the latitudinal temperature gradient, and/or the history of chronic stress and bleaching events during the last decades. Fish also showed a latitudinal gradient with higher diversity in the north, in a center of diversity for the western Indian Ocean already recognized for <span class="hlt">corals</span>. An exceptional biomass fish was recorded (approximately 3500 kg/ha excluding sharks, compared to a maximum of 1400 kg/ha elsewhere in the WIO). The presence of large predators and sharks in all the islands as well as the absence of fleshy benthic algae were indicators of the good health of the <span class="hlt">reef</span> systems. Nevertheless, these islands are beginning to experience illegal fishing, particularly in the north of the Mozambique Channel, demonstrating their vulnerability to exploitation and the need to protect them as reference sites for <span class="hlt">coral</span> <span class="hlt">reef</span> studies, including of climate change impacts, for the region</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19850527','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19850527"><span>Modelling effects of geoengineering options in response to climate change and global warming: implications for <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Crabbe, M J C</p> <p>2009-12-01</p> <p>Climate change will have serious effects on the planet and on its <span class="hlt">ecosystems</span>. Currently, mitigation efforts are proving ineffectual in reducing anthropogenic CO2 emissions. <span class="hlt">Coral</span> <span class="hlt">reefs</span> are the most sensitive <span class="hlt">ecosystems</span> on the planet to climate change, and here we review modelling a number of geoengineering options, and their potential influence on <span class="hlt">coral</span> <span class="hlt">reefs</span>. There are two categories of geoengineering, shortwave solar radiation management and longwave carbon dioxide removal. The first set of techniques only reduce some, but not all, effects of climate change, while possibly creating other problems. They also do not affect CO2 levels and therefore fail to address the wider effects of rising CO2, including ocean acidification, important for <span class="hlt">coral</span> <span class="hlt">reefs</span>. Solar radiation is important to <span class="hlt">coral</span> growth and survival, and solar radiation management is not in general appropriate for this <span class="hlt">ecosystem</span>. Longwave carbon dioxide removal techniques address the root cause of climate change, rising CO2 concentrations, they have relatively low uncertainties and risks. They are worthy of further research and potential implementation, particularly carbon capture and storage, biochar, and afforestation methods, alongside increased mitigation of atmospheric CO2 concentrations.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/20873039','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/20873039"><span>Status and conservation of <span class="hlt">coral</span> <span class="hlt">reefs</span> in Costa Rica.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cortés, Jorge; Jiménez, Carlos E; Fonseca, Ana C; Alvarado, Juan José</p> <p>2010-05-01</p> <p>Costa Rica has <span class="hlt">coral</span> communities and <span class="hlt">reefs</span> on the Caribbean coast and on the Pacific along the coast and off-shore islands. The Southern section of the Caribbean coast has fringing and patch <span class="hlt">reefs</span>, carbonate banks, and an incipient algal ridge. The Pacific coast has <span class="hlt">coral</span> communities, <span class="hlt">reefs</span> and isolated <span class="hlt">coral</span> colonies. <span class="hlt">Coral</span> <span class="hlt">reefs</span> have been seriously impacted in the last 30 years, mainly by sediments (Caribbean coast and some Pacific <span class="hlt">reefs</span>) and by El Niño warming events (both coasts). Monitoring is being carried out at three sites on each coast. Both coasts suffered significant reductions in live <span class="hlt">coral</span> cover in the 1980's, but <span class="hlt">coral</span> cover is now increasing in most sites. The government of Costa Rica is aware of the importance of <span class="hlt">coral</span> <span class="hlt">reefs</span> and marine environments in general, and in recent years decrees have been implemented (or are in the process of approval) to protect them, but limited resources endanger their proper management and conservation, including proper outreach to <span class="hlt">reef</span> users and the general public.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4785229','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4785229"><span>A <span class="hlt">coral</span>-on-a-chip microfluidic platform enabling live-imaging microscopy of <span class="hlt">reef</span>-building <span class="hlt">corals</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Shapiro, Orr H.; Kramarsky-Winter, Esti; Gavish, Assaf R.; Stocker, Roman; Vardi, Assaf</p> <p>2016-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span>, and the unique <span class="hlt">ecosystems</span> they support, are facing severe threats by human activities and climate change. Our understanding of these threats is hampered by the lack of robust approaches for studying the micro-scale interactions between <span class="hlt">corals</span> and their environment. Here we present an experimental platform, <span class="hlt">coral</span>-on-a-chip, combining micropropagation and microfluidics to allow direct microscopic study of live <span class="hlt">coral</span> polyps. The small and transparent <span class="hlt">coral</span> micropropagates are ideally suited for live-imaging microscopy, while the microfluidic platform facilitates long-term visualization under controlled environmental conditions. We demonstrate the usefulness of this approach by imaging <span class="hlt">coral</span> micropropagates at previously unattainable spatio-temporal resolutions, providing new insights into several micro-scale processes including <span class="hlt">coral</span> calcification, coral–pathogen interaction and the loss of algal symbionts (<span class="hlt">coral</span> bleaching). <span class="hlt">Coral</span>-on-a-chip thus provides a powerful method for studying <span class="hlt">coral</span> physiology in vivo at the micro-scale, opening new vistas in <span class="hlt">coral</span> biology. PMID:26940983</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016Natur.535..416C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016Natur.535..416C"><span>Bright spots among the world’s <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Cinner, Joshua E.; Huchery, Cindy; MacNeil, M. Aaron; Graham, Nicholas A. J.; McClanahan, Tim R.; Maina, Joseph; Maire, Eva; Kittinger, John N.; Hicks, Christina C.; Mora, Camilo; Allison, Edward H.; D'Agata, Stephanie; Hoey, Andrew; Feary, David A.; Crowder, Larry; Williams, Ivor D.; Kulbicki, Michel; Vigliola, Laurent; Wantiez, Laurent; Edgar, Graham; Stuart-Smith, Rick D.; Sandin, Stuart A.; Green, Alison L.; Hardt, Marah J.; Beger, Maria; Friedlander, Alan; Campbell, Stuart J.; Holmes, Katherine E.; Wilson, Shaun K.; Brokovich, Eran; Brooks, Andrew J.; Cruz-Motta, Juan J.; Booth, David J.; Chabanet, Pascale; Gough, Charlie; Tupper, Mark; Ferse, Sebastian C. A.; Sumaila, U. Rashid; Mouillot, David</p> <p>2016-07-01</p> <p>Ongoing declines in the structure and function of the world’s <span class="hlt">coral</span> <span class="hlt">reefs</span> require novel approaches to sustain these <span class="hlt">ecosystems</span> and the millions of people who depend on them. A presently unexplored approach that draws on theory and practice in human health and rural development is to systematically identify and learn from the ‘outliers’—places where <span class="hlt">ecosystems</span> are substantially better (‘bright spots’) or worse (‘dark spots’) than expected, given the environmental conditions and socioeconomic drivers they are exposed to. Here we compile data from more than 2,500 <span class="hlt">reefs</span> worldwide and develop a Bayesian hierarchical model to generate expectations of how standing stocks of <span class="hlt">reef</span> fish biomass are related to 18 socioeconomic drivers and environmental conditions. We identify 15 bright spots and 35 dark spots among our global survey of <span class="hlt">coral</span> <span class="hlt">reefs</span>, defined as sites that have biomass levels more than two standard deviations from expectations. Importantly, bright spots are not simply comprised of remote areas with low fishing pressure; they include localities where human populations and use of <span class="hlt">ecosystem</span> resources is high, potentially providing insights into how communities have successfully confronted strong drivers of change. Conversely, dark spots are not necessarily the sites with the lowest absolute biomass and even include some remote, uninhabited locations often considered near pristine. We surveyed local experts about social, institutional, and environmental conditions at these sites to reveal that bright spots are characterized by strong sociocultural institutions such as customary taboos and marine tenure, high levels of local engagement in management, high dependence on marine resources, and beneficial environmental conditions such as deep-water refuges. Alternatively, dark spots are characterized by intensive capture and storage technology and a recent history of environmental shocks. Our results suggest that investments in strengthening fisheries</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017CorRe..36..947T','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017CorRe..36..947T"><span>Expansion of <span class="hlt">corals</span> on temperate <span class="hlt">reefs</span>: direct and indirect effects of marine heatwaves</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Tuckett, C. A.; de Bettignies, T.; Fromont, J.; Wernberg, T.</p> <p>2017-09-01</p> <p>Globally, many temperate marine communities have experienced significant temperature increases over recent decades in the form of gradual warming and heatwaves. As a result, these communities are shifting towards increasingly subtropical and tropical species compositions. Expanding <span class="hlt">coral</span> populations have been reported from several temperate <span class="hlt">reef</span> <span class="hlt">ecosystems</span> along warming coastlines; these changes have been attributed to direct effects of gradual warming over decades. In contrast, increases in <span class="hlt">coral</span> populations following shorter-term extreme warming events have rarely been documented. In this study, we compared <span class="hlt">coral</span> populations on 17 temperate <span class="hlt">reefs</span> in Western Australia before (2005/06) and after (2013) multiple marine heatwaves (2010-2012) affected the entire coastline. We hypothesised that <span class="hlt">coral</span> communities would expand and change as a consequence of increasing local populations and recruitment of warm-affinity species. We found differences in <span class="hlt">coral</span> community structure over time, driven primarily by a fourfold increase of one local species, Plesiastrea versipora, rather than recruitment of warm-affinity species. <span class="hlt">Coral</span> populations became strongly dominated by small size classes, indicative of recent increased recruitment or recruit survival. These changes were likely facilitated by competitive release of <span class="hlt">corals</span> from dominant temperate seaweeds, which perished during the heatwaves, rather than driven by direct temperature effects. Overall, as <span class="hlt">corals</span> are inherently warm-water taxa not commonly associated with seaweed-dominated temperate <span class="hlt">reefs</span>, these findings are consistent with a net tropicalisation. Our study draws attention to processes other than gradual warming that also influence the trajectory of temperate <span class="hlt">reefs</span> in a changing ocean.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_17");'>17</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li class="active"><span>19</span></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_19 --> <div id="page_20" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li class="active"><span>20</span></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="381"> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014CorRe..33..409C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014CorRe..33..409C"><span>Macroalgal herbivory on recovering versus degrading <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Chong-Seng, K. M.; Nash, K. L.; Bellwood, D. R.; Graham, N. A. J.</p> <p>2014-06-01</p> <p>Macroalgal-feeding fishes are considered to be a key functional group on <span class="hlt">coral</span> <span class="hlt">reefs</span> due to their role in preventing phase shifts from <span class="hlt">coral</span> to macroalgal dominance, and potentially reversing the shift should it occur. However, assessments of macroalgal herbivory using bioassay experiments are primarily from systems with relatively high <span class="hlt">coral</span> cover. This raises the question of whether continued functionality can be ensured in degraded systems. It is clearly important to determine whether the species that remove macroalgae on <span class="hlt">coral</span>-dominated <span class="hlt">reefs</span> will still be present and performing significant algal removal on macroalgal-dominated <span class="hlt">reefs</span>. We compared the identity and effectiveness of macroalgal-feeding fishes on <span class="hlt">reefs</span> in two conditions post-disturbance—those regenerating with high live <span class="hlt">coral</span> cover (20-46 %) and those degrading with high macroalgal cover (57-82 %). Using filmed Sargassum bioassays, we found significantly different Sargassum biomass loss between the two conditions; mean assay weight loss due to herbivory was 27.9 ± 4.9 % on <span class="hlt">coral</span>-dominated <span class="hlt">reefs</span> and 2.2 ± 1.1 % on <span class="hlt">reefs</span> with high macroalgal cover. However, once standardised for the availability of macroalgae on the <span class="hlt">reefs</span>, the rates of removal were similar between the two <span class="hlt">reef</span> conditions (4.8 ± 4.1 g m-2 h-1 on <span class="hlt">coral</span>-dominated and 5.3 ± 2.1 g m-2 h-1 on macroalgal-dominated <span class="hlt">reefs</span>). Interestingly, the Sargassum-assay consumer assemblages differed between <span class="hlt">reef</span> conditions; nominally grazing herbivores, Siganus puelloides and Chlorurus sordidus, and the browser , Siganus sutor, dominated feeding on high <span class="hlt">coral</span> cover <span class="hlt">reefs</span>, whereas browsing herbivores, Naso elegans, Naso unicornis, and Leptoscarus vaigiensis, prevailed on macroalgal-dominated <span class="hlt">reefs</span>. It appeared that macroalgal density in the surrounding habitat had a strong influence on the species driving the process of macroalgal removal. This suggests that although the function of macroalgal removal may continue, the species responsible may change</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://files.eric.ed.gov/fulltext/ED448049.pdf','ERIC'); return false;" href="http://files.eric.ed.gov/fulltext/ED448049.pdf"><span><span class="hlt">Coral</span> <span class="hlt">Reefs</span>: An English Compilation of Activities for Middle School Students.</span></a></p> <p><a target="_blank" href="http://www.eric.ed.gov/ERICWebPortal/search/extended.jsp?_pageLabel=advanced">ERIC Educational Resources Information Center</a></p> <p>Walker, Sharon H.; Newton, R. Amanda; Ortiz, Alida</p> <p></p> <p>This activity book on <span class="hlt">coral</span> <span class="hlt">reefs</span> for middle school students is divided into 10 sections. Section 1 contains the introduction. Section 2 describes what <span class="hlt">coral</span> <span class="hlt">reefs</span> are while section 3 describes how <span class="hlt">coral</span> <span class="hlt">reefs</span> reproduce and grow. Section 4 discusses where <span class="hlt">coral</span> <span class="hlt">reefs</span> are found and section 5 describes life on a <span class="hlt">coral</span> <span class="hlt">reef</span>. Section 6 discusses the…</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24935524','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24935524"><span>Identifying the ichthyoplankton of a <span class="hlt">coral</span> <span class="hlt">reef</span> using DNA barcodes.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hubert, Nicolas; Espiau, Benoit; Meyer, Christopher; Planes, Serge</p> <p>2015-01-01</p> <p>Marine fishes exhibit spectacular phenotypic changes during their ontogeny, and the identification of their early stages is challenging due to the paucity of diagnostic morphological characters at the species level. Meanwhile, the importance of early life stages in dispersal and connectivity has recently experienced an increasing interest in conservation programmes for <span class="hlt">coral</span> <span class="hlt">reef</span> fishes. This study aims at assessing the effectiveness of DNA barcoding for the automated identification of <span class="hlt">coral</span> <span class="hlt">reef</span> fish larvae through large-scale <span class="hlt">ecosystemic</span> sampling. Fish larvae were mainly collected using bongo nets and light traps around Moorea between September 2008 and August 2010 in 10 sites distributed in open waters. Fish larvae ranged from 2 to 100 mm of total length, with the most abundant individuals being <5 mm. Among the 505 individuals DNA barcoded, 373 larvae (i.e. 75%) were identified to the species level. A total of 106 species were detected, among which 11 corresponded to pelagic and bathypelagic species, while 95 corresponded to species observed at the adult stage on neighbouring <span class="hlt">reefs</span>. This study highlights the benefits and pitfalls of using standardized molecular systems for species identification and illustrates the new possibilities enabled by DNA barcoding for future work on <span class="hlt">coral</span> <span class="hlt">reef</span> fish larval ecology. © 2014 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24164060','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24164060"><span>Individual-based analyses reveal limited functional overlap in a <span class="hlt">coral</span> <span class="hlt">reef</span> fish community.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Brandl, Simon J; Bellwood, David R</p> <p>2014-05-01</p> <p>Detailed knowledge of a species' functional niche is crucial for the study of ecological communities and processes. The extent of niche overlap, functional redundancy and functional complementarity is of particular importance if we are to understand <span class="hlt">ecosystem</span> processes and their vulnerability to disturbances. <span class="hlt">Coral</span> <span class="hlt">reefs</span> are among the most threatened marine systems, and anthropogenic activity is changing the functional composition of <span class="hlt">reefs</span>. The loss of herbivorous fishes is particularly concerning as the removal of algae is crucial for the growth and survival of <span class="hlt">corals</span>. Yet, the foraging patterns of the various herbivorous fish species are poorly understood. Using a multidimensional framework, we present novel individual-based analyses of species' realized functional niches, which we apply to a herbivorous <span class="hlt">coral</span> <span class="hlt">reef</span> fish community. In calculating niche volumes for 21 species, based on their microhabitat utilization patterns during foraging, and computing functional overlaps, we provide a measurement of functional redundancy or complementarity. Complementarity is the inverse of redundancy and is defined as less than 50% overlap in niche volumes. The analyses reveal extensive complementarity with an average functional overlap of just 15.2%. Furthermore, the analyses divide herbivorous <span class="hlt">reef</span> fishes into two broad groups. The first group (predominantly surgeonfishes and parrotfishes) comprises species feeding on exposed surfaces and predominantly open <span class="hlt">reef</span> matrix or sandy substrata, resulting in small niche volumes and extensive complementarity. In contrast, the second group consists of species (predominantly rabbitfishes) that feed over a wider range of microhabitats, penetrating the <span class="hlt">reef</span> matrix to exploit concealed surfaces of various substratum types. These species show high variation among individuals, leading to large niche volumes, more overlap and less complementarity. These results may have crucial consequences for our understanding of herbivorous processes on</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/16047765','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/16047765"><span>Conservation of <span class="hlt">coral</span> <span class="hlt">reefs</span> through active restoration measures: recent approaches and last decade progress.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Rinkevich, Baruch</p> <p>2005-06-15</p> <p>The scientific discipline of active restoration of denuded <span class="hlt">coral</span> <span class="hlt">reef</span> areas has drawn much attention in the past decade as it became evident that this <span class="hlt">ecosystem</span> does not often recover naturally from anthropogenic stress without manipulation. Essentially, the choices are eitherthe continuous degradation of the <span class="hlt">reefs</span> or active restoration to encourage <span class="hlt">reef</span> development. As a result, worldwide restoration operations during the past decade have been recognized as being a major tool for <span class="hlt">reef</span> rehabilitation. This situation has also stirred discussions and debates on the various restoration measures suggested as management options, supplementary to the traditional conservation acts. The present essay reviews past decade's (1994-2004) approaches and advances in <span class="hlt">coral</span> <span class="hlt">reef</span> restoration. While direct <span class="hlt">coral</span> transplantation is still the primer vehicle of operations used, the concept of in situ and ex situ <span class="hlt">coral</span> nurseries (the gardening concept), where <span class="hlt">coral</span> materials (nubbins, branches, spats) are maricultured to a size suitable for transplantation, has been gaining recognition. The use of nubbins (down to the size of a single or few polyps) has been suggested and employed as a unique technique for mass production of <span class="hlt">coral</span> colonies. Restoration of ship grounding sites and the use of artificial <span class="hlt">reefs</span> have become common tools for specific restoration needs. Substrate stabilization, 3-D structural consideration of developing colonies, and the use of molecular/biochemical tools are part of novel technology approaches developed in the past decade. Economic considerations for <span class="hlt">reef</span> restoration have become an important avenue for evaluating success of restoration activities. It has been suggested that landscape restoration and restoration genetics are important issues to be studied. In the future, as <span class="hlt">coral</span> <span class="hlt">reef</span> restoration may become the dominant conservation act, there would be the need not only to develop improved protocols but also to define the conceptual bases.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29158970','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29158970"><span>Snapshot recordings provide a first description of the acoustic signatures of deeper habitats adjacent to <span class="hlt">coral</span> <span class="hlt">reefs</span> of Moorea.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Bertucci, Frédéric; Parmentier, Eric; Berthe, Cécile; Besson, Marc; Hawkins, Anthony D; Aubin, Thierry; Lecchini, David</p> <p>2017-01-01</p> <p>Acoustic recording has been recognized as a valuable tool for non-intrusive monitoring of the marine environment, complementing traditional visual surveys. Acoustic surveys conducted on <span class="hlt">coral</span> <span class="hlt">ecosystems</span> have so far been restricted to barrier <span class="hlt">reefs</span> and to shallow depths (10-30 m). Since they may provide refuge for <span class="hlt">coral</span> <span class="hlt">reef</span> organisms, the monitoring of outer <span class="hlt">reef</span> slopes and describing of the soundscapes of deeper environment could provide insights into the characteristics of different biotopes of <span class="hlt">coral</span> <span class="hlt">ecosystems</span>. In this study, the acoustic features of four different habitats, with different topographies and substrates, located at different depths from 10 to 100 m, were recorded during day-time on the outer <span class="hlt">reef</span> slope of the north Coast of Moorea Island (French Polynesia). Barrier <span class="hlt">reefs</span> appeared to be the noisiest habitats whereas the average sound levels at other habitats decreased with their distance from the <span class="hlt">reef</span> and with increasing depth. However, sound levels were higher than expected by propagation models, supporting that these habitats possess their own sound sources. While <span class="hlt">reef</span> sounds are known to attract marine larvae, sounds from deeper habitats may then also have a non-negligible attractive potential, coming into play before the <span class="hlt">reef</span> itself.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5691791','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5691791"><span>Snapshot recordings provide a first description of the acoustic signatures of deeper habitats adjacent to <span class="hlt">coral</span> <span class="hlt">reefs</span> of Moorea</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Parmentier, Eric; Berthe, Cécile; Besson, Marc; Hawkins, Anthony D.; Aubin, Thierry; Lecchini, David</p> <p>2017-01-01</p> <p>Acoustic recording has been recognized as a valuable tool for non-intrusive monitoring of the marine environment, complementing traditional visual surveys. Acoustic surveys conducted on <span class="hlt">coral</span> <span class="hlt">ecosystems</span> have so far been restricted to barrier <span class="hlt">reefs</span> and to shallow depths (10–30 m). Since they may provide refuge for <span class="hlt">coral</span> <span class="hlt">reef</span> organisms, the monitoring of outer <span class="hlt">reef</span> slopes and describing of the soundscapes of deeper environment could provide insights into the characteristics of different biotopes of <span class="hlt">coral</span> <span class="hlt">ecosystems</span>. In this study, the acoustic features of four different habitats, with different topographies and substrates, located at different depths from 10 to 100 m, were recorded during day-time on the outer <span class="hlt">reef</span> slope of the north Coast of Moorea Island (French Polynesia). Barrier <span class="hlt">reefs</span> appeared to be the noisiest habitats whereas the average sound levels at other habitats decreased with their distance from the <span class="hlt">reef</span> and with increasing depth. However, sound levels were higher than expected by propagation models, supporting that these habitats possess their own sound sources. While <span class="hlt">reef</span> sounds are known to attract marine larvae, sounds from deeper habitats may then also have a non-negligible attractive potential, coming into play before the <span class="hlt">reef</span> itself. PMID:29158970</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23840327','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23840327"><span>A Global Estimate of the Number of <span class="hlt">Coral</span> <span class="hlt">Reef</span> Fishers.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Teh, Louise S L; Teh, Lydia C L; Sumaila, U Rashid</p> <p>2013-01-01</p> <p>Overfishing threatens <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide, yet there is no reliable estimate on the number of <span class="hlt">reef</span> fishers globally. We address this data gap by quantifying the number of <span class="hlt">reef</span> fishers on a global scale, using two approaches - the first estimates <span class="hlt">reef</span> fishers as a proportion of the total number of marine fishers in a country, based on the ratio of <span class="hlt">reef</span>-related to total marine fish landed values. The second estimates <span class="hlt">reef</span> fishers as a function of <span class="hlt">coral</span> <span class="hlt">reef</span> area, rural coastal population, and fishing pressure. In total, we find that there are 6 million <span class="hlt">reef</span> fishers in 99 <span class="hlt">reef</span> countries and territories worldwide, of which at least 25% are <span class="hlt">reef</span> gleaners. Our estimates are an improvement over most existing fisher population statistics, which tend to omit accounting for gleaners and <span class="hlt">reef</span> fishers. Our results suggest that slightly over a quarter of the world's small-scale fishers fish on <span class="hlt">coral</span> <span class="hlt">reefs</span>, and half of all <span class="hlt">coral</span> <span class="hlt">reef</span> fishers are in Southeast Asia. <span class="hlt">Coral</span> <span class="hlt">reefs</span> evidently support the socio-economic well-being of numerous coastal communities. By quantifying the number of people who are employed as <span class="hlt">reef</span> fishers, we provide decision-makers with an important input into planning for sustainable <span class="hlt">coral</span> <span class="hlt">reef</span> fisheries at the appropriate scale.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3686796','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3686796"><span>A Global Estimate of the Number of <span class="hlt">Coral</span> <span class="hlt">Reef</span> Fishers</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Teh, Louise S. L.; Teh, Lydia C. L.; Sumaila, U. Rashid</p> <p>2013-01-01</p> <p>Overfishing threatens <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide, yet there is no reliable estimate on the number of <span class="hlt">reef</span> fishers globally. We address this data gap by quantifying the number of <span class="hlt">reef</span> fishers on a global scale, using two approaches - the first estimates <span class="hlt">reef</span> fishers as a proportion of the total number of marine fishers in a country, based on the ratio of <span class="hlt">reef</span>-related to total marine fish landed values. The second estimates <span class="hlt">reef</span> fishers as a function of <span class="hlt">coral</span> <span class="hlt">reef</span> area, rural coastal population, and fishing pressure. In total, we find that there are 6 million <span class="hlt">reef</span> fishers in 99 <span class="hlt">reef</span> countries and territories worldwide, of which at least 25% are <span class="hlt">reef</span> gleaners. Our estimates are an improvement over most existing fisher population statistics, which tend to omit accounting for gleaners and <span class="hlt">reef</span> fishers. Our results suggest that slightly over a quarter of the world’s small-scale fishers fish on <span class="hlt">coral</span> <span class="hlt">reefs</span>, and half of all <span class="hlt">coral</span> <span class="hlt">reef</span> fishers are in Southeast Asia. <span class="hlt">Coral</span> <span class="hlt">reefs</span> evidently support the socio-economic well-being of numerous coastal communities. By quantifying the number of people who are employed as <span class="hlt">reef</span> fishers, we provide decision-makers with an important input into planning for sustainable <span class="hlt">coral</span> <span class="hlt">reef</span> fisheries at the appropriate scale. PMID:23840327</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013BGeo...10.6747A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013BGeo...10.6747A"><span>Dynamics of seawater carbonate chemistry, production, and calcification of a <span class="hlt">coral</span> <span class="hlt">reef</span> flat, central Great Barrier <span class="hlt">Reef</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Albright, R.; Langdon, C.; Anthony, K. R. N.</p> <p>2013-10-01</p> <p>Ocean acidification is projected to shift <span class="hlt">coral</span> <span class="hlt">reefs</span> from a state of net accretion to one of net dissolution this century. Presently, our ability to predict global-scale changes to <span class="hlt">coral</span> <span class="hlt">reef</span> calcification is limited by insufficient data relating seawater carbonate chemistry parameters to in situ rates of <span class="hlt">reef</span> calcification. Here, we investigate diel and seasonal trends in carbonate chemistry of the Davies <span class="hlt">Reef</span> flat in the central Great Barrier <span class="hlt">Reef</span> and relate these trends to benthic carbon fluxes by quantifying net <span class="hlt">ecosystem</span> calcification (nec) and net community production (ncp). Results show that seawater carbonate chemistry of the Davies <span class="hlt">Reef</span> flat is highly variable over both diel and seasonal cycles. pH (total scale) ranged from 7.92 to 8.17, pCO2 ranged from 272 to 542 μatm, and aragonite saturation state (Ωarag) ranged from 2.9 to 4.1. Diel cycles in carbonate chemistry were primarily driven by ncp, and warming explained 35% and 47% of the seasonal shifts in pCO2 and pH, respectively. Daytime ncp averaged 37 ± 19 mmol C m-2 h-1 in summer and 33 ± 13 mmol C m-2 h-1 in winter; nighttime ncp averaged -30 ± 25 and -7 ± 6 mmol C m-2 h-1 in summer and winter, respectively. Daytime nec averaged 11 ± 4 mmol CaCO3 m-2 h-1 in summer and 8 ± 3 mmol CaCO3 m-2 h-1 in winter, whereas nighttime nec averaged 2 ± 4 mmol and -1 ± 3 mmol CaCO3 m-2 h-1 in summer and winter, respectively. Net <span class="hlt">ecosystem</span> calcification was highly sensitive to changes in Ωarag for both seasons, indicating that relatively small shifts in Ωarag may drive measurable shifts in calcification rates, and hence carbon budgets, of <span class="hlt">coral</span> <span class="hlt">reefs</span> throughout the year.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015CorRe..34..955S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015CorRe..34..955S"><span>Effects of seawater acidification on a <span class="hlt">coral</span> <span class="hlt">reef</span> meiofauna community</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sarmento, V. C.; Souza, T. P.; Esteves, A. M.; Santos, P. J. P.</p> <p>2015-09-01</p> <p>Despite the increasing risk that ocean acidification will modify benthic communities, great uncertainty remains about how this impact will affect the lower trophic levels, such as members of the meiofauna. A mesocosm experiment was conducted to investigate the effects of water acidification on a phytal meiofauna community from a <span class="hlt">coral</span> <span class="hlt">reef</span>. Community samples collected from the <span class="hlt">coral</span> <span class="hlt">reef</span> subtidal zone (Recife de Fora Municipal Marine Park, Porto Seguro, Bahia, Brazil), using artificial substrate units, were exposed to a control pH (ambient seawater) and to three levels of seawater acidification (pH reductions of 0.3, 0.6, and 0.9 units below ambient) and collected after 15 and 30 d. After 30 d of exposure, major changes in the structure of the meiofauna community were observed in response to reduced pH. The major meiofauna groups showed divergent responses to acidification. Harpacticoida and Polychaeta densities did not show significant differences due to pH. Nematoda, Ostracoda, Turbellaria, and Tardigrada exhibited their highest densities in low-pH treatments (especially at the pH reduction of 0.6 units, pH 7.5), while harpacticoid nauplii were strongly negatively affected by low pH. This community-based mesocosm study supports previous suggestions that ocean acidification induces important changes in the structure of marine benthic communities. Considering the importance of meiofauna in the food web of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, the results presented here demonstrate that the trophic functioning of <span class="hlt">coral</span> <span class="hlt">reefs</span> is seriously threatened by ocean acidification.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26879898','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26879898"><span>How accessible are <span class="hlt">coral</span> <span class="hlt">reefs</span> to people? A global assessment based on travel time.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Maire, Eva; Cinner, Joshua; Velez, Laure; Huchery, Cindy; Mora, Camilo; Dagata, Stephanie; Vigliola, Laurent; Wantiez, Laurent; Kulbicki, Michel; Mouillot, David</p> <p>2016-04-01</p> <p>The depletion of natural resources has become a major issue in many parts of the world, with the most accessible resources being most at risk. In the terrestrial realm, resource depletion has classically been related to accessibility through road networks. In contrast, in the marine realm, the impact on living resources is often framed into the Malthusian theory of human density around <span class="hlt">ecosystems</span>. Here, we develop a new framework to estimate the accessibility of global <span class="hlt">coral</span> <span class="hlt">reefs</span> using potential travel time from the nearest human settlement or market. We show that 58% of <span class="hlt">coral</span> <span class="hlt">reefs</span> are located < 30 min from the nearest human settlement. We use a case study from New Caledonia to demonstrate that travel time from the market is a strong predictor of fish biomass on <span class="hlt">coral</span> <span class="hlt">reefs</span>. We also highlight a relative deficit of protection on <span class="hlt">coral</span> <span class="hlt">reef</span> areas near people, with disproportional protection on <span class="hlt">reefs</span> far from people. This suggests that conservation efforts are targeting low-conflict <span class="hlt">reefs</span> or places that may already be receiving de facto protection due to their isolation. Our global assessment of accessibility in the marine realm is a critical step to better understand the interplay between humans and resources. © 2016 John Wiley & Sons Ltd/CNRS.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://www.dtic.mil/docs/citations/ADA624717','DTIC-ST'); return false;" href="http://www.dtic.mil/docs/citations/ADA624717"><span>Deepwater Program: Exploration and Research of Northern Gulf of Mexico Deepwater Natural and Artificial Hard Bottom Habitats with Emphasis on <span class="hlt">Coral</span> Communities: <span class="hlt">Reefs</span>, Rigs and Wrecks</span></a></p> <p><a target="_blank" href="http://www.dtic.mil/">DTIC Science & Technology</a></p> <p></p> <p>2010-01-01</p> <p>Ocean Acidification on <span class="hlt">Coral</span> <span class="hlt">Reefs</span> and Other Marine Calcifiers: A Guide for...Roberts, J.M. & Guinotte, J.J. (2007) <span class="hlt">Corals</span> in deep water: Will the unseen hand of ocean acidification destroy cold water <span class="hlt">ecosystems</span>? <span class="hlt">Coral</span> <span class="hlt">Reefs</span> ...scleractinians from the NE Atlantic Ocean . <span class="hlt">Coral</span> <span class="hlt">Reefs</span> , 24(3), 514-522. Wang JL, Whitlock MC (2003) Estimating effective population size and migration rates</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://hdl.handle.net/2060/20080037577','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/20080037577"><span>The Use of Simulated Visible/Infrared Imager/Radiometer Suite (VIIRS) and Landsat Data Continuity Mission (LDCM) Imagery for <span class="hlt">Coral</span> <span class="hlt">Reef</span> Monitoring</span></a></p> <p><a target="_blank" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Estep, L.; Spruce, J.; Blonski, S.; Moore, R.</p> <p>2008-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are some of the most biologically rich and economically important <span class="hlt">ecosystems</span> on Earth. <span class="hlt">Coral</span> <span class="hlt">reefs</span> are Earth's largest biological structures and have taken thousands of years to form. <span class="hlt">Coral</span> <span class="hlt">reefs</span> not only provide important habitat for many marine animals and plants, but they also provide humanity with food, jobs, chemicals, protection against storms, and life-saving pharmaceuticals. Severe bleaching events have occurred that have dramatic long-term ecological impacts to <span class="hlt">corals</span>, including loss of <span class="hlt">reef</span>-building <span class="hlt">corals</span>, changes in benthic habitat, and, in some cases, changes in larval fish populations (Holden and Ledrew, 1998). Some researchers suggest that 10 percent of Earth s <span class="hlt">coral</span> <span class="hlt">reefs</span> have already been destroyed and that another 60 percent are in danger. Scientists have proposed that as much as 95 percent of Jamaica's <span class="hlt">reefs</span> are dying or dead. This poster reports on a Rapid Prototyping Capability (RPC) experiment done to determine whether future NASA sensors - the Visible/Infrared Imager/Radiometer Suite (VIIRS) and Landsat Data Continuity Mission (LDCM) - could generate key data products for the Integrated <span class="hlt">Coral</span> <span class="hlt">Reef</span> Observation Network (ICON)/<span class="hlt">Coral</span> <span class="hlt">Reef</span> Early Warning System (CREWS) Decision Support Tool (DST) operated by the National Oceanic and Atmospheric Administration (NOAA).</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/18477024','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/18477024"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> habitats as surrogates of species, ecological functions, and <span class="hlt">ecosystem</span> services.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mumby, Peter J; Broad, Kenneth; Brumbaugh, Daniel R; Dahlgren, Craig P; Harborne, Alastair R; Hastings, Alan; Holmes, Katherine E; Kappel, Carrie V; Micheli, Fiorenza; Sanchirico, James N</p> <p>2008-08-01</p> <p>Habitat maps are often the core spatially consistent data set on which marine reserve networks are designed, but their efficacy as surrogates for species richness and applicability to other conservation measures is poorly understood. Combining an analysis of field survey data, literature review, and expert assessment by a multidisciplinary working group, we examined the degree to which Caribbean coastal habitats provide useful planning information on 4 conservation measures: species richness, the ecological functions of fish species, <span class="hlt">ecosystem</span> processes, and <span class="hlt">ecosystem</span> services. Approximately one-quarter to one-third of benthic invertebrate species and fish species (disaggregated by life phase; hereafter fish species) occurred in a single habitat, and Montastraea-dominated forereefs consistently had the highest richness of all species, processes, and services. All 11 habitats were needed to represent all 277 fish species in the seascape, although reducing the conservation target to 95% of species approximately halved the number of habitats required to ensure representation. Species accumulation indices (SAIs) were used to compare the efficacy of surrogates and revealed that fish species were a more appropriate surrogate of benthic species (SAI = 71%) than benthic species were for fishes (SAI = 42%). Species of <span class="hlt">reef</span> fishes were also distributed more widely across the seascape than invertebrates and therefore their use as a surrogate simultaneously included mangroves, sea grass, and <span class="hlt">coral</span> <span class="hlt">reef</span> habitats. Functional classes of fishes served as effective surrogates of fish and benthic species which, given their ease to survey, makes them a particularly useful measure for conservation planning. <span class="hlt">Ecosystem</span> processes and services exhibited great redundancy among habitats and were ineffective as surrogates of species. Therefore, processes and services in this case were generally unsuitable for a complementarity-based approach to reserve design. In contrast, the representation</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29886969','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29886969"><span>An environmental magnetism approach to assess impacts of land-derived sediment disturbances on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> (Cartagena, Colombia).</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mejia-Echeverry, Daniela; Chaparro, Marcos A E; Duque-Trujillo, José F; Restrepo, Juan D</p> <p>2018-06-01</p> <p>We used environmental magnetism methods to study recently deposited marine sediments from the estuarine <span class="hlt">ecosystems</span> on the Caribbean coast of Colombia. Cartagena region has undergone an increasing sediment load during the last decades via sediment plumes from Magdalena River and its distributary man-made channel. Concentration dependent magnetic parameters show an increasing abundance of ferrimagnetic minerals on the uppermost sediments on sites located close to the continent (remanent magnetization SIRM = 5.4-9.5 × 10 -3 Am 2  kg -1 ) as well as faraway sites (SIRM = 0.5-1.7 × 10 -3 Am 2  kg -1 near Rosario Islands <span class="hlt">coral</span> <span class="hlt">reef</span> complex). The magnetic grain size and mineralogy along the cores are variable, showing the dominance of the magnetite-like minerals (remanent coercivity H cr  = 34.3-45.3 mT), with a minor contribution of high-coercivity minerals (H cr  = 472-588 mT). In addition, there is a moderate enrichment of elements Cu, Mo, and Zn (enrichment factor EF = 1.5-3.8) that indicates the additional land-derived contribution on sediments. The environmental magnetism approach, which shows significant signals of magnetic minerals and trace elements, is a reliable tool to prove the presence of continental sediment supply in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. Copyright © 2018 Elsevier Ltd. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017ChJOL..35..501Z','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017ChJOL..35..501Z"><span>Regional hard <span class="hlt">coral</span> distribution within geomorphic and <span class="hlt">reef</span> flat ecological zones determined by satellite imagery of the Xisha Islands, South China Sea</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Zuo, Xiuling; Su, Fenzhen; Zhao, Huanting; Zhang, Junjue; Wang, Qi; Wu, Di</p> <p>2017-05-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> in the Xisha Islands (also known as the Paracel Islands in English), South China Sea, have experienced dramatic declines in <span class="hlt">coral</span> cover. However, the current regional scale hard <span class="hlt">coral</span> distribution of geomorphic and ecological zones, essential for <span class="hlt">reefs</span> management in the context of global warming and ocean acidification, is not well documented. We analyzed data from field surveys, Landsat-8 and GF-1 images to map the distribution of hard <span class="hlt">coral</span> within geomorphic zones and <span class="hlt">reef</span> flat ecological zones. In situ surveys conducted in June 2014 on nine <span class="hlt">reefs</span> provided a complete picture of <span class="hlt">reef</span> status with regard to live <span class="hlt">coral</span> diversity, evenness of <span class="hlt">coral</span> cover and <span class="hlt">reef</span> health (live versus dead cover) for the Xisha Islands. Mean <span class="hlt">coral</span> cover was 12.5% in 2014 and damaged <span class="hlt">reefs</span> seemed to show signs of recovery. <span class="hlt">Coral</span> cover in sheltered habitats such as lagoon patch <span class="hlt">reefs</span> and biotic dense zones of <span class="hlt">reef</span> flats was higher, but there were large regional differences and low diversity. In contrast, the more exposed <span class="hlt">reef</span> slopes had high <span class="hlt">coral</span> diversity, along with high and more equal distributions of <span class="hlt">coral</span> cover. Mean hard <span class="hlt">coral</span> cover of other zones was <10%. The total Xisha <span class="hlt">reef</span> system was estimated to cover 1 060 km2, and the emergent <span class="hlt">reefs</span> covered 787 m2. Hard <span class="hlt">corals</span> of emergent <span class="hlt">reefs</span> were considered to cover 97 km2. The biotic dense zone of the <span class="hlt">reef</span> flat was a very common zone on all simple atolls, especially the broader northern <span class="hlt">reef</span> flats. The total cover of live and dead <span class="hlt">coral</span> can reach above 70% in this zone, showing an equilibrium between live and dead <span class="hlt">coral</span> as opposed to <span class="hlt">coral</span> and algae. This information regarding the spatial distribution of hard <span class="hlt">coral</span> can support and inform the management of Xisha <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSAH12A..05C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSAH12A..05C"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> sediment dissolution: Insights from chamber incubations around the globe</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Cyronak, T.; Andersson, A. J.; Eyre, B.</p> <p>2016-02-01</p> <p>Ocean acidification (OA) is expected to negatively affect the calcium carbonate (CaCO3) budget of <span class="hlt">coral</span> <span class="hlt">reefs</span> by decreasing calcification and increasing CaCO3 dissolution rates. Sediments represent the largest reservoir of CaCO3 in <span class="hlt">coral</span> <span class="hlt">reefs</span> and form important habitats above and below the hide tide mark. Results from in situ benthic incubations at different <span class="hlt">coral</span> <span class="hlt">reef</span> locations around the world (Australia, Tahiti, Bermuda, Cook Islands, and Hawaii) reveal that there is a general trend between bulk seawater aragonite saturation state (Ωar) and net CaCO3 sediment dissolution rates. Experimental incubations also indicate that the ratio of production to respiration (P/R) in the sediments plays a significant role in CaCO3 dissolution, with high P/R ratios potentially offsetting the effects of human induced OA. This is most likely due to benthic microalgae photosynthesizing and consuming CO2, which produces conditions more favourable for CaCO3 precipitation in sediment pore waters. Despite any interactions with benthic organic metabolism, sediment dissolution could be an order of magnitude more sensitive to OA compared to the process of biogenic calcification. Increases in CaCO3 sediment dissolution under predicted CO2 emissions could shift the net <span class="hlt">ecosystem</span> calcification (NEC) of <span class="hlt">coral</span> <span class="hlt">reefs</span> from net CaCO3 precipitating to net dissolving by the end of this century.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28099761','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28099761"><span>Size structuring and allometric scaling relationships in <span class="hlt">coral</span> <span class="hlt">reef</span> fishes.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Dunic, Jillian C; Baum, Julia K</p> <p>2017-05-01</p> <p>Temperate marine fish communities are often size-structured, with predators consuming increasingly larger prey and feeding at higher trophic levels as they grow. Gape limitation and ontogenetic diet shifts are key mechanisms by which size structuring arises in these communities. Little is known, however, about size structuring in <span class="hlt">coral</span> <span class="hlt">reef</span> fishes. Here, we aimed to advance understanding of size structuring in <span class="hlt">coral</span> <span class="hlt">reef</span> food webs by examining the evidence for these mechanisms in two groups of <span class="hlt">reef</span> predators. Given the diversity of feeding modes amongst <span class="hlt">coral</span> <span class="hlt">reef</span> fishes, we also compared gape size-body size allometric relationships across functional groups to determine whether they are reliable indicators of size structuring. We used gut content analysis and quantile regressions of predator size-prey size relationships to test for evidence of gape limitation and ontogenetic niche shifts in <span class="hlt">reef</span> piscivores (n = 13 species) and benthic invertivores (n = 3 species). We then estimated gape size-body size allometric scaling coefficients for 21 different species from four functional groups, including herbivores/detritivores, which are not expected to be gape-limited. We found evidence of both mechanisms for size structuring in <span class="hlt">coral</span> <span class="hlt">reef</span> piscivores, with maximum prey size scaling positively with predator body size, and ontogenetic diet shifts including prey type and expansion of prey size. There was, however, little evidence of size structuring in benthic invertivores. Across species and functional groups, absolute and relative gape sizes were largest in piscivores as expected, but gape size-body size scaling relationships were not indicative of size structuring. Instead, relative gape sizes and mouth morphologies may be better indicators. Our results provide evidence that <span class="hlt">coral</span> <span class="hlt">reef</span> piscivores are size-structured and that gape limitation and ontogenetic niche shifts are the mechanisms from which this structure arises. Although gape allometry was not indicative of</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22980773','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22980773"><span>The continuing decline of <span class="hlt">coral</span> <span class="hlt">reefs</span> in Bahrain.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Burt, John A; Al-Khalifa, Khalifa; Khalaf, Ebtesam; Alshuwaikh, Bassem; Abdulwahab, Ahmed</p> <p>2013-07-30</p> <p>Historically <span class="hlt">coral</span> <span class="hlt">reefs</span> of Bahrain were among the most extensive in the southern basin of the Arabian Gulf. However, Bahrain's <span class="hlt">reefs</span> have undergone significant decline in the last four decades as a result of large-scale coastal development and elevated sea surface temperature events. Here we quantitatively surveyed six sites including most major <span class="hlt">coral</span> <span class="hlt">reef</span> habitats around Bahrain and a <span class="hlt">reef</span> located 72 km offshore. Fleshy and turf algae now dominate Bahrain's <span class="hlt">reefs</span> (mean: 72% cover), and live <span class="hlt">coral</span> cover is low (mean: 5.1%). Formerly dominant Acropora were not observed at any site. The offshore Bulthama <span class="hlt">reef</span> had the highest <span class="hlt">coral</span> cover (16.3%) and species richness (22 of the 23 species observed, 13 of which were exclusive to this site). All <span class="hlt">reefs</span> for which recent and historical data are available show continued degradation, and it is unlikely that they will recover under continuing coastal development and projected climate change impacts. Copyright © 2012 Elsevier Ltd. All rights reserved.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_18");'>18</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li class="active"><span>20</span></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_20 --> <div id="page_21" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li class="active"><span>21</span></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="401"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24166756','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24166756"><span>Evidence for multiple stressor interactions and effects on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ban, Stephen S; Graham, Nicholas A J; Connolly, Sean R</p> <p>2014-03-01</p> <p>Concern is growing about the potential effects of interacting multiple stressors, especially as the global climate changes. We provide a comprehensive review of multiple stressor interactions in <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>, which are widely considered to be one of the most sensitive <span class="hlt">ecosystems</span> to global change. First, we synthesized <span class="hlt">coral</span> <span class="hlt">reef</span> studies that examined interactions of two or more stressors, highlighting stressor interactions (where one stressor directly influences another) and potentially synergistic effects on response variables (where two stressors interact to produce an effect that is greater than purely additive). For stressor-stressor interactions, we found 176 studies that examined at least 2 of the 13 stressors of interest. Applying network analysis to analyze relationships between stressors, we found that pathogens were exacerbated by more costressors than any other stressor, with ca. 78% of studies reporting an enhancing effect by another stressor. Sedimentation, storms, and water temperature directly affected the largest number of other stressors. Pathogens, nutrients, and crown-of-thorns starfish were the most-influenced stressors. We found 187 studies that examined the effects of two or more stressors on a third dependent variable. The interaction of irradiance and temperature on <span class="hlt">corals</span> has been the subject of more research (62 studies, 33% of the total) than any other combination of stressors, with many studies reporting a synergistic effect on <span class="hlt">coral</span> symbiont photosynthetic performance (n = 19). Second, we performed a quantitative meta-analysis of existing literature on this most-studied interaction (irradiance and temperature). We found that the mean effect size of combined treatments was statistically indistinguishable from a purely additive interaction, although it should be noted that the sample size was relatively small (n = 26). Overall, although in aggregate a large body of literature examines stressor effects on <span class="hlt">coral</span> <span class="hlt">reefs</span> and <span class="hlt">coral</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2003EAEJA....13041D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2003EAEJA....13041D"><span>The modern deep water <span class="hlt">coral</span> <span class="hlt">reefs</span> off NW-Europe: the largest <span class="hlt">reef</span> province in the world</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Dullo, W. C.; Freiwald, A.</p> <p>2003-04-01</p> <p>Recently discovered deep-water <span class="hlt">coral</span> <span class="hlt">reefs</span> and <span class="hlt">coral</span> mounds in the Procupine Seabight and in the Rockall Trough are part of a North Atlantic <span class="hlt">coral</span> <span class="hlt">reef</span> province, stretching from the Iberian Peninsula up to northern Norway within the intermediate water-mass. Current research activities underline the significance of these <span class="hlt">coral</span> <span class="hlt">eco-systems</span> as a centre of extreme high biodiversity and biomass indicated by numerous economically important nurtrients for humans as well as resources for marine biochemical products. This unexpected high biological activity along continental margins, which is responsible for the formation of 100 m high biogenic mounds, creating impressive geological reliefs, portrays the complex coupling between hydrosphere and geosphere. The geological importance of these recent and living carbonate structures is underlined by the fact that this "<span class="hlt">reef</span> type" or mud mound is a very prominent carbon hydrogen reservoir throughout earth history. Such mud mound structures cannot be compared with any other present-day shallow water <span class="hlt">reef</span>. Our present knowledge about <span class="hlt">reefs</span> and carbonate production is limited to the areas of the shallow shelves mainly within the tropical region. Only few studies exist from high latitudes and from the continental margin of NW Europe. Further occurences of these deep-water mounds have recently been discovered off West Africa and off SE Brasilia within the frame of exploration activities. The portion of the climate-forcing greenhouse gas CO_2, stored in these mounds during glacial and interglacial times has not been introduced into model runs and prediction scenarios so far. These mounds do not depend on glacial/interglacial sea-level changes in the same way as their shallow-water counterparts do. Deep-water <span class="hlt">coral</span> mounds react and respond to changes in the oceanographic regime and are triggered by abrupt changes within the sedimentary environment (increased erosion of shelf sediments during low stands of sea level as well as slope</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35..125L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35..125L"><span>Mesophotic depths as refuge areas for fishery-targeted species on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Lindfield, Steven J.; Harvey, Euan S.; Halford, Andrew R.; McIlwain, Jennifer L.</p> <p>2016-03-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are subjected to unprecedented levels of disturbance with population growth and climate change combining to reduce standing <span class="hlt">coral</span> cover and stocks of <span class="hlt">reef</span> fishes. Most of the damage is concentrated in shallow waters (<30 m deep) where humans can comfortably operate and where physical disturbances are most disruptive to marine organisms. Yet <span class="hlt">coral</span> <span class="hlt">reefs</span> can extend to depths exceeding 100 m, potentially offering refuge from the threats facing shallower <span class="hlt">reefs</span>. We deployed baited remote underwater stereo-video systems (stereo-BRUVs) at depths of 10-90 m around the southern Mariana Islands to investigate whether fish species targeted by fishing in the shallows may be accruing benefits from being at depth. We show that biomass, abundance and species richness of fishery-targeted species increased from shallow <span class="hlt">reef</span> areas to a depth of 60 m, whereas at greater depths, a lack of live <span class="hlt">coral</span> habitat corresponded to lower numbers of fish. The majority of targeted species were found to have distributions that ranged from shallow depths (10 m) to depths of at least 70 m, emphasising that habitat, not depth, is the limiting factor in their vertical distribution. While the gradient of abundance and biomass versus depth was steepest for predatory species, the first species usually targeted by fishing, we also found that fishery-targeted herbivores prevailed in similar biomass and species richness to 60 m. Compared to shallow marine protected areas, there was clearly greater biomass of fishery-targeted species accrued in mesophotic depths. Particularly some species typically harvested by depth-limited fishing methods (e.g., spearfishing), such as the endangered humphead wrasse Cheilinus undulatus, were found in greater abundance on deeper <span class="hlt">reefs</span>. We conclude that mesophotic depths provide essential fish habitat and refuge for fishery-targeted species, representing crucial zones for fishery management and research into the resilience of disturbed <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018CorRe..37..431S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018CorRe..37..431S"><span>Early-phase dynamics in <span class="hlt">coral</span> recovery following cyclone disturbance on the inshore Great Barrier <span class="hlt">Reef</span>, Australia</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sato, Yui; Bell, Sara C.; Nichols, Cassandra; Fry, Kent; Menéndez, Patricia; Bourne, David G.</p> <p>2018-06-01</p> <p><span class="hlt">Coral</span> recovery (the restoration of abundance and composition of <span class="hlt">coral</span> communities) after disturbance is a key process that determines the resilience of <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. To understand the mechanisms underlying the recovery process of <span class="hlt">coral</span> communities, colony abundance and size distribution were followed on <span class="hlt">reefs</span> around Pelorus Island, located in the inshore central region of the Great Barrier <span class="hlt">Reef</span>, following a severe tropical cyclone in 2011 that caused dramatic loss of <span class="hlt">coral</span> communities. Permanent quadrats (600 m2) were monitored biannually between 2012 and 2016, and individual <span class="hlt">coral</span> colonies were counted, sized and categorized into morphological types. The abundance of <span class="hlt">coral</span> recruits and <span class="hlt">coral</span> cover were also examined using permanent quadrats and random line intercept transects, respectively. The number of colonies in the smallest size class (4-10 cm) increased substantially during the study period, driving the recovery of <span class="hlt">coral</span> populations. The total number of <span class="hlt">coral</span> colonies 5 yr post-cyclone reached between 73 and 122% of pre-cyclone levels though <span class="hlt">coral</span> cover remained between 16 and 31% of pre-cyclone levels, due to the dominance of small <span class="hlt">coral</span> colonies in the recovering communities. Temporal transitions of <span class="hlt">coral</span> demography (i.e., colony-size distributions) illustrated that the number of recently established <span class="hlt">coral</span> populations overtook communities of surviving colonies. <span class="hlt">Coral</span> recruits (< 4 cm in size) also showed increasing patterns in abundance over the study period, underscoring the importance of larval supply in <span class="hlt">coral</span> recovery. A shift in morphological composition of <span class="hlt">coral</span> communities was also observed, with the relative abundance of encrusting <span class="hlt">corals</span> reduced post-cyclone in contrast to their dominance prior to the disturbance. This study identifies the fine-scale processes involved in the initial recovery of <span class="hlt">coral</span> <span class="hlt">reefs</span>, providing insights into the dynamics of <span class="hlt">coral</span> demography that are essential for determining <span class="hlt">coral</span> <span class="hlt">reef</span> resilience following major</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016GGG....17..846V','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016GGG....17..846V"><span>Impact of warming events on <span class="hlt">reef</span>-scale temperature variability as captured in two Little Cayman <span class="hlt">coral</span> Sr/Ca records</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>von Reumont, J.; Hetzinger, S.; Garbe-Schönberg, D.; Manfrino, C.; Dullo, W.-Chr.</p> <p>2016-03-01</p> <p>The rising temperature of the world's oceans is affecting <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> by increasing the frequency and severity of bleaching and mortality events. The susceptibility of <span class="hlt">corals</span> to temperature stress varies on local and regional scales. Insights into potential controlling parameters are hampered by a lack of long term in situ data in most <span class="hlt">coral</span> <span class="hlt">reef</span> environments and sea surface temperature (SST) products often do not resolve <span class="hlt">reef</span>-scale variations. Here we use 42 years (1970-2012) of <span class="hlt">coral</span> Sr/Ca data to reconstruct seasonal- to decadal-scale SST variations in two adjacent but distinct <span class="hlt">reef</span> environments at Little Cayman, Cayman Islands. Our results indicate that two massive Diploria strigosa <span class="hlt">corals</span> growing in the lagoon and in the fore <span class="hlt">reef</span> responded differently to past warming events. <span class="hlt">Coral</span> Sr/Ca data from the shallow lagoon successfully record high summer temperatures confirmed by in situ observations (>33°C). Surprisingly, <span class="hlt">coral</span> Sr/Ca from the deeper fore <span class="hlt">reef</span> is strongly affected by thermal stress events, although seasonal temperature extremes and mean SSTs at this site are reduced compared to the lagoon. The shallow lagoon <span class="hlt">coral</span> showed decadal variations in Sr/Ca, supposedly related to the modulation of lagoonal temperature through varying tidal water exchange, influenced by the 18.6 year lunar nodal cycle. Our results show that <span class="hlt">reef</span>-scale SST variability can be much larger than suggested by satellite SST measurements. Thus, using <span class="hlt">coral</span> SST proxy records from different <span class="hlt">reef</span> zones combined with in situ observations will improve conservation programs that are developed to monitor and predict potential thermal stress on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.gpo.gov/fdsys/pkg/FR-2012-08-14/pdf/2012-19848.pdf','FEDREG'); return false;" href="https://www.gpo.gov/fdsys/pkg/FR-2012-08-14/pdf/2012-19848.pdf"><span>77 FR 48504 - Proposed Information Collection; Comment Request; Economic Value of Puerto Rico's <span class="hlt">Coral</span> <span class="hlt">Reef</span>...</span></a></p> <p><a target="_blank" href="http://www.gpo.gov/fdsys/browse/collection.action?collectionCode=FR">Federal Register 2010, 2011, 2012, 2013, 2014</a></p> <p></p> <p>2012-08-14</p> <p>... DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Proposed Information Collection; Comment Request; Economic Value of Puerto Rico's <span class="hlt">Coral</span> <span class="hlt">Reef</span> <span class="hlt">Ecosystems</span> for Recreation-Tourism... made for all <span class="hlt">ecosystem</span> services for the Guanica Bay Watershed and for recreation-tourism for all of...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015OSJ....50..269K','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015OSJ....50..269K"><span>The potential roles of bacterial communities in <span class="hlt">coral</span> defence: A case study at Talang-talang <span class="hlt">reef</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Kuek, Felicity W. I.; Lim, Li-Fang; Ngu, Lin-Hui; Mujahid, Aazani; Lim, Po-Teen; Leaw, Chui-Pin; Müller, Moritz</p> <p>2015-06-01</p> <p>Complex microbial communities are known to exert significant influence over <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. The Talang- Satang National Park is situated off the coast of Sematan and is one of the most diverse <span class="hlt">ecosystems</span> found off-Sarawak. Interestingly, the Talang-talang <span class="hlt">reef</span> thrives at above-average temperatures of 28- 30°C throughout the year. Through isolation and identification (16S rRNA) of native microbes from the <span class="hlt">coral</span>, the surface mucus layer (SML), as well as the surrounding sediment and waters, we were able to determine the species composition and abundance of the culturable bacteria in the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystem</span>. Isolates found attached to the <span class="hlt">coral</span> are related mostly to Vibrio spp., presumably attached to the mucus from the water column and surrounding sediment. Pathogenic Vibrio spp. and Bacillus spp. were dominant amongst the isolates from the water column and sediment, while known <span class="hlt">coral</span> pathogens responsible for <span class="hlt">coral</span> bleaching, Vibrio coralliilyticus and Vibrio shiloi, were isolated from the <span class="hlt">coral</span> SML and sediment samples respectively. <span class="hlt">Coral</span> SML isolates were found to be closely related to known nitrogen fixers and antibiotic producers with tolerance towards elevated temperatures and heavy metal contamination, offering a possible explanation why the local <span class="hlt">corals</span> are able to thrive in higher than usual temperatures. This specialized microbiota may be important for protecting the <span class="hlt">corals</span> from pathogens by occupying entry niches and/or through the production of secondary metabolites such as antibiotics. The communities from the <span class="hlt">coral</span> SML were tested against each other at 28, 30 and 32°C, and were also assessed for the presence of type I modular polyketides synthase (PKS) and non-ribosomal peptide synthetase (NRPS) genes which are both involved in the production of antibiotic compounds. The bacterial community from the SML exhibited antimicrobial properties under normal temperatures while pathogenic strains appeared toxic at elevated temperatures and our results</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22462739','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22462739"><span>Anthropogenic mortality on <span class="hlt">coral</span> <span class="hlt">reefs</span> in Caribbean Panama predates <span class="hlt">coral</span> disease and bleaching.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cramer, Katie L; Jackson, Jeremy B C; Angioletti, Christopher V; Leonard-Pingel, Jill; Guilderson, Thomas P</p> <p>2012-06-01</p> <p>Caribbean <span class="hlt">reef</span> <span class="hlt">corals</span> have declined precipitously since the 1980s due to regional episodes of bleaching, disease and algal overgrowth, but the extent of earlier degradation due to localised historical disturbances such as land clearing and overfishing remains unresolved. We analysed <span class="hlt">coral</span> and molluscan fossil assemblages from <span class="hlt">reefs</span> near Bocas del Toro, Panama to construct a timeline of ecological change from the 19th century-present. We report large changes before 1960 in coastal lagoons coincident with extensive deforestation, and after 1960 on offshore <span class="hlt">reefs</span>. Striking changes include the demise of previously dominant staghorn <span class="hlt">coral</span> Acropora cervicornis and oyster Dendrostrea frons that lives attached to gorgonians and staghorn <span class="hlt">corals</span>. Reductions in bivalve size and simplification of gastropod trophic structure further implicate increasing environmental stress on <span class="hlt">reefs</span>. Our paleoecological data strongly support the hypothesis, from extensive qualitative data, that Caribbean <span class="hlt">reef</span> degradation predates <span class="hlt">coral</span> bleaching and disease outbreaks linked to anthropogenic climate change. © 2012 Blackwell Publishing Ltd/CNRS.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1690925','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=1690925"><span>Trawling damage to Northeast Atlantic ancient <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Hall-Spencer, Jason; Allain, Valerie; Fosså, Jan Helge</p> <p>2002-01-01</p> <p>This contribution documents widespread trawling damage to cold-water <span class="hlt">coral</span> <span class="hlt">reefs</span> at 840-1300 m depth along the West Ireland continental shelf break and at 200 m off West Norway. These <span class="hlt">reefs</span> are spectacular but poorly known. By-catches from commercial trawls for deep-water fish off West Ireland included large pieces (up to 1 m(2)) of <span class="hlt">coral</span> that had been broken from <span class="hlt">reefs</span> and a diverse array of <span class="hlt">coral</span>-associated benthos. Five azooxanthellate scleractinarian <span class="hlt">corals</span> were identified in these by-catches, viz. Desmophyllum cristagalli, Enallopsammia rostrata, Lophelia pertusa, Madrepora oculata and Solenosmilia variabilis. Dating of carbonate skeletons using (14)C accelerator mass spectrometry showed that the trawled <span class="hlt">coral</span> matrix was at least 4550 years old. Surveys by remotely operated vehicles in Norway showed extensive fishing damage to L. pertusa <span class="hlt">reefs</span>. The urgent need for deep-water <span class="hlt">coral</span> conservation measures is discussed in a Northeast Atlantic context. PMID:11886643</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2008AGUSMOS23A..02R','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2008AGUSMOS23A..02R"><span>Habitat, Fauna, and Conservation of Florida's Deep-Water <span class="hlt">Coral</span> <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Reed, J. K.; Pomponi, S. A.; Messing, C. G.; Brooke, S.</p> <p>2008-05-01</p> <p>Various types of deep-water <span class="hlt">coral</span> habitats are common off the southeastern United States from the Blake Plateau through the Straits of Florida to the eastern Gulf of Mexico. Expeditions in the past decade with the Johnson-Sea- Link manned submersibles, ROVs, and AUVs have discovered, mapped and compiled data on the status, distribution, habitat, and biodiversity for many of these relatively unknown deep-sea <span class="hlt">coral</span> <span class="hlt">ecosystems</span>. We have discovered over three hundred, high relief (15-152-m tall) <span class="hlt">coral</span> mounds (depth 700-800 m) along the length of eastern Florida (700 km). The north Florida sites are rocky lithoherms, whereas the southern sites are primarily classic <span class="hlt">coral</span> bioherms, capped with dense 1-2 m tall thickets of Lophelia pertusa and Enallopsammia profunda. Off southeastern Florida, the Miami Terrace escarpment (depth 300-600 m) extends nearly 150 km as a steep, rocky slope of Miocene-age phosphoritic limestone, which provides habitat for a rich biodiversity of fish and benthic invertebrates. Off the Florida Keys, the Pourtalès Terrace (depth 200- 460 m) has extensive high-relief bioherms and numerous deep-water sinkholes to depths of 250-610 m and diameters up to 800 m. The dominant, deep-water, colonial scleractinian <span class="hlt">corals</span> in this region include Oculina varicosa, L. pertusa, E. profunda, Madrepora oculata, and Solenosmilia variabilis. Other <span class="hlt">coral</span> species include hydrozoans (Stylasteridae), bamboo octocorals (Isididae), numerous other gorgonians, and black <span class="hlt">corals</span> (Antipatharia). These structure-forming taxa provide habitat and living space for a relatively unknown but biologically rich and diverse community of crustaceans, mollusks, echinoderms, polychaete and sipunculan worms, and associated fishes. We have identified 142 taxa of benthic macro-invertebrates, including 66 Porifera and 57 Cnidaria. Nearly 100 species of fish have been identified to date in association with these deep-water <span class="hlt">coral</span> habitats. Paull et al. (2000) estimated that over 40</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016CorRe..35.1271M','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016CorRe..35.1271M"><span>Ecological limitations to the resilience of <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Mora, Camilo; Graham, Nicholas A. J.; Nyström, Magnus</p> <p>2016-12-01</p> <p>The decline of <span class="hlt">coral</span> <span class="hlt">reefs</span> has been broadly attributed to human stressors being too strong and pervasive, whereas biological processes that may render <span class="hlt">coral</span> <span class="hlt">reefs</span> fragile have been sparsely considered. Here we review several ecological factors that can limit the ability of <span class="hlt">coral</span> <span class="hlt">reefs</span> to withstand disturbance. These include: (1) Many species lack the adaptive capacity to cope with the unprecedented disturbances they currently face; (2) human disturbances impact vulnerable life history stages, reducing reproductive output and the supply of recruits essential for recovery; (3) <span class="hlt">reefs</span> can be vulnerable to the loss of few species, as niche specialization or temporal and spatial segregation makes each species unique (i.e., narrow ecological redundancy); in addition, many foundation species have similar sensitivity to disturbances, suggesting that entire functions can be lost to single disturbances; and (4) feedback loops and extinction vortices may stabilize degraded states or accelerate collapses even if stressors are removed. This review suggests that the degradation of <span class="hlt">coral</span> <span class="hlt">reefs</span> is due to not only the severity of human stressors but also the "fragility" of <span class="hlt">coral</span> <span class="hlt">reefs</span>. As such, appropriate governance is essential to manage stressors while being inclusive of ecological process and human uses across transnational scales. This is a considerable but necessary upgrade in current management if the integrity, and delivery of goods and services, of <span class="hlt">coral</span> <span class="hlt">reefs</span> is to be preserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015BGeo...12..365C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015BGeo...12..365C"><span>Ocean acidification accelerates dissolution of experimental <span class="hlt">coral</span> <span class="hlt">reef</span> communities</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Comeau, S.; Carpenter, R. C.; Lantz, C. A.; Edmunds, P. J.</p> <p>2015-01-01</p> <p>Ocean acidification (OA) poses a severe threat to tropical <span class="hlt">coral</span> <span class="hlt">reefs</span>, yet much of what is know about these effects comes from individual <span class="hlt">corals</span> and algae incubated in isolation under high pCO2. Studies of similar effects on <span class="hlt">coral</span> <span class="hlt">reef</span> communities are scarce. To investigate the response of <span class="hlt">coral</span> <span class="hlt">reef</span> communities to OA, we used large outdoor flumes in which communities composed of calcified algae, <span class="hlt">corals</span>, and sediment were combined to match the percentage cover of benthic communities in the shallow back <span class="hlt">reef</span> of Moorea, French Polynesia. <span class="hlt">Reef</span> communities in the flumes were exposed to ambient (~ 400 μatm) and high pCO2 (~ 1300 μatm) for 8 weeks, and calcification rates measured for the constructed communities including the sediments. Community calcification was reduced by 59% under high pCO2, with sediment dissolution explaining ~ 50% of this decrease; net calcification of <span class="hlt">corals</span> and calcified algae remained positive but was reduced by 29% under elevated pCO2. These results show that, despite the capacity of <span class="hlt">coral</span> <span class="hlt">reef</span> calcifiers to maintain positive net accretion of calcium carbonate under OA conditions, <span class="hlt">reef</span> communities might transition to net dissolution as pCO2 increases, particularly at night, due to enhanced sediment dissolution.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2014BGD....1112323C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2014BGD....1112323C"><span>Ocean acidification accelerates dissolution of experimental <span class="hlt">coral</span> <span class="hlt">reef</span> communities</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Comeau, S.; Carpenter, R. C.; Lantz, C. A.; Edmunds, P. J.</p> <p>2014-08-01</p> <p>Ocean acidification (OA) poses a severe threat to tropical <span class="hlt">coral</span> <span class="hlt">reefs</span>, yet much of what is know about these effects comes from individual <span class="hlt">corals</span> and algae incubated in isolation under high pCO2. Studies of similar effects on <span class="hlt">coral</span> <span class="hlt">reef</span> communities are scarce. To investigate the response of <span class="hlt">coral</span> <span class="hlt">reef</span> communities to OA, we used large outdoor flumes in which communities composed of calcified algae, <span class="hlt">corals</span>, and sediment were combined to match the percentage cover of benthic communities in the shallow back <span class="hlt">reef</span> of Moorea, French Polynesia. <span class="hlt">Reef</span> communities in the flumes were exposed to ambient (~400 μatm) and high pCO2 (~1300 μatm) for 8 weeks, and calcification rates measured for the constructed communities including the sediments. Community calcification was depressed 59% under high pCO2, with sediment dissolution explaining ~50% of this decrease; net calcification of <span class="hlt">corals</span> and calcified algae remained positive, but was reduced 29% under elevated pCO2. These results show that despite the capacity of <span class="hlt">coral</span> <span class="hlt">reef</span> calcifiers to maintain positive net accretion of calcium carbonate under OA conditions, <span class="hlt">reef</span> communities might switch to net dissolution as pCO2 increases, particularly at night, due to enhanced sediment dissolution.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015AGUFM.B43C0581L','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015AGUFM.B43C0581L"><span>Mapping seagrass beds and <span class="hlt">coral</span> <span class="hlt">reefs</span> in the coastal region of Vietnam using VNREDSAT-1 data</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Lau, K. V.; Chen, C. F.; Nguyen, S. T.; Chen, C. R.; Tong Phuoc, H. S.; Nguyen, H. H.</p> <p>2015-12-01</p> <p>Seagrass beds and <span class="hlt">coral</span> <span class="hlt">reefs</span> are two important <span class="hlt">ecosystems</span> in the coastal zone. They play an important role to protect and shelter various marine organisms. Both seagrass beds and <span class="hlt">coral</span> <span class="hlt">reefs</span> could prevent the coastline from erosion. While seagrass stabilizes sediments and acts as a biofilter, <span class="hlt">coral</span> <span class="hlt">reefs</span> can control carbon dioxide in the ocean water. Besides, seagrass also provides direct food for many fish and marine animals. Therefore, mapping seagrass beds and <span class="hlt">coral</span> <span class="hlt">reefs</span> is very important for coastal management and conservation. In May 2013, Vietnam launched the first satellite for earth observations, called Vietnam Natural Resources, Environment and Disaster Monitoring Satellite (VNREDSAT-1). It is a great opportunity for environmental monitoring in the country using the data from this satellite. The objective of this study is to use the VNREDSAT-1 data to map seagrass beds and <span class="hlt">coral</span> <span class="hlt">reefs</span> in the coastal region of Ninh Hai district, Ninh Thuan province, Vietnam, where the seagrass still remains in good a condition. We processed the VNREDSAT-1 image through four steps: (1) Atmospheric correction using Second Simulation of the Satellite Signal in the Solar Spectrum radiative transfer model (6S), (2) Sun glint removal by using Hedley method, (3) Water column correction using the depth-variant index (DII) proposed by Lyzenga, and (4) Image classification using the maximum likelihood algorithm. The mapping results verified with the ground reference data showed a good overall accuracy of 75% and Kappa coefficient of 0.7. The total area of seagrass beds was approximately 323.09 ha, which mainly distributed in My Hoa and Thai An villages. The total area of <span class="hlt">coral</span> <span class="hlt">reefs</span> was approximately 564.42 ha, located along the coast and on outer area to seagrass and shoreline <span class="hlt">reefs</span>. This study demonstrates the applicability of VNREDSAT-1 for underwater habitat monitoring. The results could be useful for natural resources managers to devise strategies for management and</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/1995CorRe..14..253G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/1995CorRe..14..253G"><span><span class="hlt">Coral</span> <span class="hlt">reefs</span> in an urban embayment in Hawaii: a complex case history controlled by natural and anthropogenic stress</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Grigg, R. W.</p> <p>1995-11-01</p> <p>The effects of natural and anthropogenic stress need to be separated before <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> can be effectively managed. In this paper, a 25 year case history of <span class="hlt">coral</span> <span class="hlt">reefs</span> in an urban embayment (Mamala Bay) off Honolulu, Hawaii is described and differences between natural and man-induced stress are distinguished. Mamala Bay is a 30 km long shallow coastal bay bordering the southern (leeward) shore of Oahu and the city of Honolulu in the Hawaiian Islands. During the last 25 years, this area has been hit by two magnitude 5 hurricane events (winds > 240 km/h) generating waves in excess of 7.5 m. Also during this period, two large sewer outfalls have discharged up to 90 million gallons per day (mgd) or (360 × 106 L/day) of point source pollution into the bay. Initially the discharge was raw sewage, but since 1977 it has received advanced primary treatment. Non-point source run-off from the Honolulu watershed also enters the bay on a daily basis. The results of the study show that discharge of raw sewage had a serious but highly localized impact on shallow (˜10 m) <span class="hlt">reef</span> <span class="hlt">corals</span> in the bay prior to 1977. After 1977, when treatment was upgraded to the advanced primary level and outfalls were extended to deep water (> 65 m), impacts to <span class="hlt">reef</span> <span class="hlt">corals</span> were no longer significant. No measurable effects of either point or non-point source pollution on <span class="hlt">coral</span> calcification, growth, species composition, diversity or community structure related to pollution can now be detected. Conversely the effects of hurricane waves in 1982 and 1992 together caused major physical destruction to the <span class="hlt">reefs</span>. In 1982, average <span class="hlt">coral</span> cover of well-developed offshore <span class="hlt">reefs</span> dropped from 60-75% to 5-15%. Only massive species in high relief areas survived. Today, recovery is occurring, and notwithstanding major future disturbance events, long-term biological processes should eventually return the <span class="hlt">coral</span> <span class="hlt">ecosystems</span> to a more mature successional stage. This case history illustrates the complex nature of</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4855387','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4855387"><span>The DNA of <span class="hlt">coral</span> <span class="hlt">reef</span> biodiversity: predicting and protecting genetic diversity of <span class="hlt">reef</span> assemblages</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Gaggiotti, Oscar E.; Treml, Eric A.; Wren, Johanna L. K.; Donovan, Mary K.; Toonen, Robert J.</p> <p>2016-01-01</p> <p>Conservation of ecological communities requires deepening our understanding of genetic diversity patterns and drivers at community-wide scales. Here, we use seascape genetic analysis of a diversity metric, allelic richness (AR), for 47 <span class="hlt">reef</span> species sampled across 13 Hawaiian Islands to empirically demonstrate that large <span class="hlt">reefs</span> high in <span class="hlt">coral</span> cover harbour the greatest genetic diversity on average. We found that a species's life history (e.g. depth range and herbivory) mediates response of genetic diversity to seascape drivers in logical ways. Furthermore, a metric of combined multi-species AR showed strong coupling to species richness and habitat area, quality and stability that few species showed individually. We hypothesize that macro-ecological forces and species interactions, by mediating species turnover and occupancy (and thus a site's mean effective population size), influence the aggregate genetic diversity of a site, potentially allowing it to behave as an apparent emergent trait that is shaped by the dominant seascape drivers. The results highlight inherent feedbacks between ecology and genetics, raise concern that genetic resilience of entire <span class="hlt">reef</span> communities is compromised by factors that reduce <span class="hlt">coral</span> cover or available habitat, including thermal stress, and provide a foundation for new strategies for monitoring and preserving biodiversity of entire <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. PMID:27122569</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27122569','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27122569"><span>The DNA of <span class="hlt">coral</span> <span class="hlt">reef</span> biodiversity: predicting and protecting genetic diversity of <span class="hlt">reef</span> assemblages.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Selkoe, Kimberly A; Gaggiotti, Oscar E; Treml, Eric A; Wren, Johanna L K; Donovan, Mary K; Toonen, Robert J</p> <p>2016-04-27</p> <p>Conservation of ecological communities requires deepening our understanding of genetic diversity patterns and drivers at community-wide scales. Here, we use seascape genetic analysis of a diversity metric, allelic richness (AR), for 47 <span class="hlt">reef</span> species sampled across 13 Hawaiian Islands to empirically demonstrate that large <span class="hlt">reefs</span> high in <span class="hlt">coral</span> cover harbour the greatest genetic diversity on average. We found that a species's life history (e.g. depth range and herbivory) mediates response of genetic diversity to seascape drivers in logical ways. Furthermore, a metric of combined multi-species AR showed strong coupling to species richness and habitat area, quality and stability that few species showed individually. We hypothesize that macro-ecological forces and species interactions, by mediating species turnover and occupancy (and thus a site's mean effective population size), influence the aggregate genetic diversity of a site, potentially allowing it to behave as an apparent emergent trait that is shaped by the dominant seascape drivers. The results highlight inherent feedbacks between ecology and genetics, raise concern that genetic resilience of entire <span class="hlt">reef</span> communities is compromised by factors that reduce <span class="hlt">coral</span> cover or available habitat, including thermal stress, and provide a foundation for new strategies for monitoring and preserving biodiversity of entire <span class="hlt">reef</span> <span class="hlt">ecosystems</span>. © 2016 The Authors.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23885577','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23885577"><span>[Community structure of zooxanthellate <span class="hlt">corals</span> (Anthozoa: Scleractinia) in Carrizales <span class="hlt">coral</span> <span class="hlt">reef</span>, Pacific coast, Mexico].</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Reyes-Bonilla, Hector; Escobosa-González, Laura Elena; Cupul-Magaña, Amilcar L; Medina-Rosas, Pedro; Calderón-Aguilera, Luis E</p> <p>2013-06-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> in the Mexican Pacific and notably those of the continental coastline of Colima state are still poorly studied. Fortunately, recent efforts have been carried out by researchers from different Mexican institutions to fill up these information gaps. The aim of this study was to determine the ecological structure of the rich and undisturbed <span class="hlt">coral</span> building communities of Carrizales by using the point transect interception method (25m-long). For this, three survey expeditions were conducted between June and October 2005 and September 2006; and for comparison purposes, the <span class="hlt">reef</span> was subdivided according to its position in the bay, and depth (0 to 5 m, and 6 to 10 m). Thirteen <span class="hlt">coral</span> species were observed in the area, with Pocillopora verrucosa as the most abundant, contributing up to 32.8% of total cover, followed by Porites panamensis and Pocillopora capitata with 11% and 7%, respectively. Other species, Pocillopora damicornis, Pavona gigantea, Pocillopora eydouxi and Pocillopora inflata accounted for 1.5% to 2% of <span class="hlt">coral</span> cover whereas the remaining five species had cover of less than 1%. Seven of the observed species represented new records for Colima state coastline: Pocillopora eydouxi, P inflata, P meandrina, Pavona duerdeni, P varians, Psammocora stellata and P contigua. This last species is a relevant record, because it has never been observed before in the Eastern Pacific. Although there was no significant difference (ANOVA, p = 0.478) neither in the abundance between the sides of the bay, nor between the depths considered, and the shallow zone observed the higher <span class="hlt">coral</span> cover. Live <span class="hlt">coral</span> cover was up to 61%, one of the highest ever reported for the Mexican Pacific, including the Gulf of California. The observed values of diversity (H' = 0.44 +/- 0.02), uniformity (J' = 0.76 +/- 0.02), and taxonomic distinctness index (delta* = 45.87 +/- 3.16), showed that currently this is the most important <span class="hlt">coral</span> <span class="hlt">reef</span> of Colima coastline. Currently, this region does not</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012EOSTr..93R.400B','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012EOSTr..93R.400B"><span>Low calcification in <span class="hlt">corals</span> in the Great Barrier <span class="hlt">Reef</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Bhattacharya, Atreyee</p> <p>2012-10-01</p> <p><span class="hlt">Reef</span>-building <span class="hlt">coral</span> communities in the Great Barrier Reef—the world's largest <span class="hlt">coral</span> reef—may now be calcifying at only about half the rate that they did during the 1970s, even though live <span class="hlt">coral</span> cover may not have changed over the past 40 years, a new study finds. In recent decades, <span class="hlt">coral</span> <span class="hlt">reefs</span> around the world, home to large numbers of fish and other marine species, have been threatened by such human activities as pollution, overfishing, global warming, and ocean acidification; the latter affects ambient water chemistry and availability of calcium ions, which are critical for <span class="hlt">coral</span> communities to calcify, build, and maintain <span class="hlt">reefs</span>. Comparing data from <span class="hlt">reef</span> surveys during the 1970s, 1980s, and 1990s with present-day (2009) measurements of calcification rates in One Tree Island, a <span class="hlt">coral</span> <span class="hlt">reef</span> covering 13 square kilometers in the southern part of the Great Barrier <span class="hlt">Reef</span>, Silverman et al. show that the total calcification rates (the rate of calcification minus the rate of dissolution) in these <span class="hlt">coral</span> communities have decreased by 44% over the past 40 years; the decrease appears to stem from a threefold reduction in calcification rates during nighttime.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUFMGC51G..07D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUFMGC51G..07D"><span>Past exposure to climate extremes can inform future projections and guide management: <span class="hlt">coral</span> <span class="hlt">reefs</span> as a model system</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Donner, S. D.</p> <p>2016-12-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are thought to be more sensitive to climate change than any other marine <span class="hlt">ecosystem</span>. Episodes of mass <span class="hlt">coral</span> bleaching, due to anomalously warm water temperatures, have led to <span class="hlt">coral</span> mortality, declines in <span class="hlt">coral</span> cover and shifts in the population of other <span class="hlt">reef</span>-dwelling organisms. The onset of mass bleaching is typically predicted using accumulated heat stress, specifically when the SST exceeds a local climatological maximum by 1-2 °C for a month or more. However, recent evidence suggests that the threshold at which bleaching occurs depends on the past thermal experience of the <span class="hlt">coral</span> <span class="hlt">reef</span> and the composition of the <span class="hlt">coral</span> community. This presentation describes the results of a long-term field and modelling research program evaluating the influence of climate experience on the susceptibility of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> to future climate extremes. Modeling work identified Kiribati's equatorial Gilbert Islands, where the El Niño / Southern Oscillation drives year-to-year shifts in current strength, current direction and consequently ocean temperatures, as an ideal natural laboratory for studying ocean climate extremes. The field program then tracked changes in the <span class="hlt">coral</span> communities over multiple heat stress events (e.g. 2004-5, 2009-10 El Niño) at a matrix of sites exposed to different levels of historical climate variability and human disturbance. Among the results is evidence that <span class="hlt">coral</span> bleaching patterns are best predicted by the coefficient of variation of past SST, light exposure, and the presence of particular resilient <span class="hlt">coral</span> taxa, rather than the standard heat stress metrics. The lessons of this research can be applicable other systems where past experience influences the response to climate extremes</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_19");'>19</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li class="active"><span>21</span></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_21 --> <div id="page_22" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li class="active"><span>22</span></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="421"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70189157','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70189157"><span>Baseline assessments for <span class="hlt">coral</span> <span class="hlt">reef</span> community structure and demographics on West Maui</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Vargas-Angel, Bernardo; White, Darla; Storlazzi, Curt; Callender, Tova; Maurin, Paulo</p> <p>2017-01-01</p> <p>The coastal and upslope terrains of West Maui have had a long history of impacts owing to more than a century of human activities. Resource extraction, agriculture, as well as residential and resort development have caused land-based pollution that impairs water quality and adversely impact the adjacent marine <span class="hlt">ecosystem</span>. Today, West Maui’s <span class="hlt">coral</span> <span class="hlt">reefs</span> are chronically impacted by the effects of land-based pollution, mainly sedimentation and nutrients, with documented losses of 30 – 75% in <span class="hlt">coral</span> cover over the last 20 years. Nonetheless, despite their current status and levels of environmental impact, these <span class="hlt">coral</span> <span class="hlt">reef</span> communities represent a key local resource and a counterpoint to the overall low <span class="hlt">coral</span> <span class="hlt">reef</span> development levels both island- and state-wide. This is of high relevance because the occurrence of <span class="hlt">coral</span>-rich assemblages and accreted <span class="hlt">reef</span> complexes statewide is sparse. Only limited segments along the coastlines of Maui, Hawai‘i, Lana‘i, Moloka‘i, and Kaho‘olawe, harbor mature, fringing <span class="hlt">coral</span> <span class="hlt">reefs</span>; and unfortunately, many of them are seriously threatened by terrestrial runoff. This report describes the results of baseline assessment surveys of <span class="hlt">coral</span> <span class="hlt">reef</span> benthic structure, <span class="hlt">coral</span> community demographics, and <span class="hlt">coral</span> condition. These surveys are intended to provide benchmarks for continued monitoring efforts and provide a gauge for comparing and evaluating the effectiveness of management actions to reduce land-based sources of pollution in priority watersheds on West Maui. Within this context, 12 permanent, long-term monitoring sites were strategically established adjacent to the 7 primary stream drainages (Wahikuli, Honokōwai, Mahinahina, Kahana/Ka‘opala, Honokeana, Honokahua, and Honolua) within the five priority watersheds (Wahikuli, Honokōwai, Kahana, Honokahua, and Honolua). Herein, benthic cover and composition, <span class="hlt">coral</span> demographics, and <span class="hlt">coral</span> condition of the monitoring sites are described and contrasted in the “Benthic Characterization</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29333706','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29333706"><span>Estimating the footprint of pollution on <span class="hlt">coral</span> <span class="hlt">reefs</span> with models of species turnover.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Brown, Christopher J; Hamilton, Richard J</p> <p>2018-01-15</p> <p>Ecological communities typically change along gradients of human impact, although it is difficult to estimate the footprint of impacts for diffuse threats such as pollution. We developed a joint model (i.e., one that includes multiple species and their interactions with each other and environmental covariates) of benthic habitats on lagoonal <span class="hlt">coral</span> <span class="hlt">reefs</span> and used it to infer change in benthic composition along a gradient of distance from logging operations. The model estimated both changes in abundances of benthic groups and their compositional turnover, a type of beta diversity. We used the model to predict the footprint of turbidity impacts from past and recent logging. Benthic communities far from logging were dominated by branching <span class="hlt">corals</span>, whereas communities close to logging had higher cover of dead <span class="hlt">coral</span>, massive <span class="hlt">corals</span>, and soft sediment. Recent impacts were predicted to be small relative to the extensive impacts of past logging because recent logging has occurred far from lagoonal <span class="hlt">reefs</span>. Our model can be used more generally to estimate the footprint of human impacts on <span class="hlt">ecosystems</span> and evaluate the benefits of conservation actions for <span class="hlt">ecosystems</span>. © 2018 Society for Conservation Biology.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013AGUSMOS21A..02T','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013AGUSMOS21A..02T"><span>Field Spectroscopy And Spectral Analysis Of Caribbean Scleractinian <span class="hlt">Reef</span> <span class="hlt">Corals</span> And Related Benthic Biota</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Torres-Perez, J. L.; Guild, L. S.; Armstrong, R.; Corredor, J. E.; Polanco, R.; Zuluaga-Montero, A. B.</p> <p>2013-05-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are highly heterogenic <span class="hlt">ecosystems</span> with a plethora of photosynthetic organisms forming most of the benthic communities. Usually <span class="hlt">coral</span> <span class="hlt">reef</span> benthos is a composite of <span class="hlt">reef</span> <span class="hlt">corals</span>, different groups of algae, seagrasses, sandy bottoms, dead rubble, and even mangrove forests living in a relatively small area. The remote characterization of these important tropical <span class="hlt">ecosystems</span> represents a challenge to scientists, particularly due to the similarity of the spectral signatures among some of these components. As such, we examined the similarities and differences between nine Scleractinian Caribbean shallow-water <span class="hlt">reef</span> <span class="hlt">corals</span>' spectral reflectance curves. Samples were also collected from each species for pigment analysis using High Performance Liquid Chromatography (HPLC). Reflectance curves were obtained with the aid of a GER-1500 hand-held field spectroradiometer enclosed in an underwater housing. Our findings showed that even though most of the pigmentation was directly related to the relationship of <span class="hlt">corals</span> with their symbiotic dinoflagellates (zooxanthellae), the presence of other endolithic photosynthetic organisms can also contribute to the light absorption of <span class="hlt">corals</span> and, hence, the reflectance spectra of each species. Also, the relative contribution of chlorophylls vs. carotenes or xanthophylls depends on the <span class="hlt">coral</span> species with some species relying more on Chlorophyll a and other species relying on Chlorophyl c2 and Peridinin with a small Chlorophyll a component. Pigments associated with the xanthophyll cycle of dinoflagellates (Diadinoxanthin and Diatoxanthin) were detected in most species. Pigments typical of endolithic organisms such as Zeaxanthin, Fucoxanthin, Violaxanthin and Siphonaxanthin were also detected in some <span class="hlt">coral</span> species. The influence of major pigments on the reflectance curve was evidenced with a 2nd derivative analysis. This could be used to discriminate among most species. Further, an analysis of the integration of the area under the</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26839155','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26839155"><span>Humans and seasonal climate variability threaten large-bodied <span class="hlt">coral</span> <span class="hlt">reef</span> fish with small ranges.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Mellin, C; Mouillot, D; Kulbicki, M; McClanahan, T R; Vigliola, L; Bradshaw, C J A; Brainard, R E; Chabanet, P; Edgar, G J; Fordham, D A; Friedlander, A M; Parravicini, V; Sequeira, A M M; Stuart-Smith, R D; Wantiez, L; Caley, M J</p> <p>2016-02-03</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are among the most species-rich and threatened <span class="hlt">ecosystems</span> on Earth, yet the extent to which human stressors determine species occurrences, compared with biogeography or environmental conditions, remains largely unknown. With ever-increasing human-mediated disturbances on these <span class="hlt">ecosystems</span>, an important question is not only how many species can inhabit local communities, but also which biological traits determine species that can persist (or not) above particular disturbance thresholds. Here we show that human pressure and seasonal climate variability are disproportionately and negatively associated with the occurrence of large-bodied and geographically small-ranging fishes within local <span class="hlt">coral</span> <span class="hlt">reef</span> communities. These species are 67% less likely to occur where human impact and temperature seasonality exceed critical thresholds, such as in the marine biodiversity hotspot: the <span class="hlt">Coral</span> Triangle. Our results identify the most sensitive species and critical thresholds of human and climatic stressors, providing opportunity for targeted conservation intervention to prevent local extinctions.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4742806','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4742806"><span>Humans and seasonal climate variability threaten large-bodied <span class="hlt">coral</span> <span class="hlt">reef</span> fish with small ranges</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Mellin, C.; Mouillot, D.; Kulbicki, M.; McClanahan, T. R.; Vigliola, L.; Bradshaw, C. J. A.; Brainard, R. E.; Chabanet, P.; Edgar, G. J.; Fordham, D. A.; Friedlander, A. M.; Parravicini, V.; Sequeira, A. M. M.; Stuart-Smith, R. D.; Wantiez, L.; Caley, M. J.</p> <p>2016-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are among the most species-rich and threatened <span class="hlt">ecosystems</span> on Earth, yet the extent to which human stressors determine species occurrences, compared with biogeography or environmental conditions, remains largely unknown. With ever-increasing human-mediated disturbances on these <span class="hlt">ecosystems</span>, an important question is not only how many species can inhabit local communities, but also which biological traits determine species that can persist (or not) above particular disturbance thresholds. Here we show that human pressure and seasonal climate variability are disproportionately and negatively associated with the occurrence of large-bodied and geographically small-ranging fishes within local <span class="hlt">coral</span> <span class="hlt">reef</span> communities. These species are 67% less likely to occur where human impact and temperature seasonality exceed critical thresholds, such as in the marine biodiversity hotspot: the <span class="hlt">Coral</span> Triangle. Our results identify the most sensitive species and critical thresholds of human and climatic stressors, providing opportunity for targeted conservation intervention to prevent local extinctions. PMID:26839155</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=200207','PESTICIDES'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?direntryid=200207"><span>Water Quality Standards for <span class="hlt">Coral</span> <span class="hlt">Reef</span> Protection | Science ...</span></a></p> <p><a target="_blank" href="http://www.epa.gov/pesticides/search.htm">EPA Pesticide Factsheets</a></p> <p></p> <p></p> <p>The U.S. Clean Water Act provides a legal framework to protect coastal biological resources such as <span class="hlt">coral</span> <span class="hlt">reefs</span>, mangrove forests, and seagrass meadows from the damaging effects of human activities. Even though many resources are protected under this authority, water quality standards have not been effectively applied to <span class="hlt">coral</span> <span class="hlt">reefs</span>. The Environmental Protection Agency is promoting biocriteria and other water quality standards through collaborative development of bioassessment procedures, indicators and monitoring strategies. To support regulatory action, bioassessment indicators must be biologically meaningful, relevant to management, responsive to human disturbance, and relatively immune to natural variability. A rapid bioassessment protocol for <span class="hlt">reef</span>-building stony <span class="hlt">corals</span> was developed and tested for regulatory applicability. Preliminary testing in the Florida Keys found indicators had sufficient precision and provided information relevant to <span class="hlt">coral</span> <span class="hlt">reef</span> management. Sensitivity to human disturbance was demonstrated in the U.S. Virgin Islands for five of eight indicators tested. Once established, monitoring programs using these indicators can provide valuable, long-term records of <span class="hlt">coral</span> condition and regulatory compliance. Development of a rapid bioassement protocol for <span class="hlt">reef</span>-building stony <span class="hlt">corals</span> was tested for regulatory applicability.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23565725','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23565725"><span>High natural gene expression variation in the <span class="hlt">reef</span>-building <span class="hlt">coral</span> Acropora millepora: potential for acclimative and adaptive plasticity.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Granados-Cifuentes, Camila; Bellantuono, Anthony J; Ridgway, Tyrone; Hoegh-Guldberg, Ove; Rodriguez-Lanetty, Mauricio</p> <p>2013-04-08</p> <p><span class="hlt">Ecosystems</span> worldwide are suffering the consequences of anthropogenic impact. The diverse <span class="hlt">ecosystem</span> of <span class="hlt">coral</span> <span class="hlt">reefs</span>, for example, are globally threatened by increases in sea surface temperatures due to global warming. Studies to date have focused on determining genetic diversity, the sequence variability of genes in a species, as a proxy to estimate and predict the potential adaptive response of <span class="hlt">coral</span> populations to environmental changes linked to climate changes. However, the examination of natural gene expression variation has received less attention. This variation has been implicated as an important factor in evolutionary processes, upon which natural selection can act. We acclimatized <span class="hlt">coral</span> nubbins from six colonies of the <span class="hlt">reef</span>-building <span class="hlt">coral</span> Acropora millepora to a common garden in Heron Island (Great Barrier <span class="hlt">Reef</span>, GBR) for a period of four weeks to remove any site-specific environmental effects on the physiology of the <span class="hlt">coral</span> nubbins. By using a cDNA microarray platform, we detected a high level of gene expression variation, with 17% (488) of the unigenes differentially expressed across <span class="hlt">coral</span> nubbins of the six colonies (jsFDR-corrected, p < 0.01). Among the main categories of biological processes found differentially expressed were transport, translation, response to stimulus, oxidation-reduction processes, and apoptosis. We found that the transcriptional profiles did not correspond to the genotype of the colony characterized using either an intron of the carbonic anhydrase gene or microsatellite loci markers. Our results provide evidence of the high inter-colony variation in A. millepora at the transcriptomic level grown under a common garden and without a correspondence with genotypic identity. This finding brings to our attention the importance of taking into account natural variation between <span class="hlt">reef</span> <span class="hlt">corals</span> when assessing experimental gene expression differences. The high transcriptional variation detected in this study is interpreted and discussed within the</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3630057','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3630057"><span>High natural gene expression variation in the <span class="hlt">reef</span>-building <span class="hlt">coral</span> Acropora millepora: potential for acclimative and adaptive plasticity</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p></p> <p>2013-01-01</p> <p>Background <span class="hlt">Ecosystems</span> worldwide are suffering the consequences of anthropogenic impact. The diverse <span class="hlt">ecosystem</span> of <span class="hlt">coral</span> <span class="hlt">reefs</span>, for example, are globally threatened by increases in sea surface temperatures due to global warming. Studies to date have focused on determining genetic diversity, the sequence variability of genes in a species, as a proxy to estimate and predict the potential adaptive response of <span class="hlt">coral</span> populations to environmental changes linked to climate changes. However, the examination of natural gene expression variation has received less attention. This variation has been implicated as an important factor in evolutionary processes, upon which natural selection can act. Results We acclimatized <span class="hlt">coral</span> nubbins from six colonies of the <span class="hlt">reef</span>-building <span class="hlt">coral</span> Acropora millepora to a common garden in Heron Island (Great Barrier <span class="hlt">Reef</span>, GBR) for a period of four weeks to remove any site-specific environmental effects on the physiology of the <span class="hlt">coral</span> nubbins. By using a cDNA microarray platform, we detected a high level of gene expression variation, with 17% (488) of the unigenes differentially expressed across <span class="hlt">coral</span> nubbins of the six colonies (jsFDR-corrected, p < 0.01). Among the main categories of biological processes found differentially expressed were transport, translation, response to stimulus, oxidation-reduction processes, and apoptosis. We found that the transcriptional profiles did not correspond to the genotype of the colony characterized using either an intron of the carbonic anhydrase gene or microsatellite loci markers. Conclusion Our results provide evidence of the high inter-colony variation in A. millepora at the transcriptomic level grown under a common garden and without a correspondence with genotypic identity. This finding brings to our attention the importance of taking into account natural variation between <span class="hlt">reef</span> <span class="hlt">corals</span> when assessing experimental gene expression differences. The high transcriptional variation detected in this study is</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26231839','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26231839"><span>Molecular reproductive characteristics of the <span class="hlt">reef</span> <span class="hlt">coral</span> Pocillopora damicornis.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Rougée, Luc R A; Richmond, Robert H; Collier, Abby C</p> <p>2015-11-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are an indispensible worldwide resource, accounting for billions of dollars in cultural, economic, and ecological services. An understanding of <span class="hlt">coral</span> reproduction is essential to determining the effects of environmental stressors on <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> and their persistence into the future. Here, we describe the presence of and changes in steroidal hormones along with associated steroidogenic and steroid removal enzymes during the reproductive cycle of the brooding, pan-Pacific, hermaphroditic <span class="hlt">coral</span>, Pocillopora damicornis. Detectable levels of 17β-estradiol, estrone, progesterone and testosterone were consistently detected over two consecutive lunar reproductive cycles in <span class="hlt">coral</span> tissue. Intra-colony variation in steroid hormone levels ranged between 1.5- and 2.2-fold and were not statistically different. Activities of the steroidogenic enzymes 3β-hydroxysteroid dehydrogenase and cytochrome P450 (CYP) 17 dehydrogenase were detectable and did not fluctuate over the reproductive cycle. Aromatase-like activity was detected during the lunar reproductive cycle with no significant fluctuations. Activities of regeneration enzymes did not fluctuate over the lunar cycle; however, activity of the clearance enzyme UDP-glucuronosyl transferases increased significantly (ANOVA, post hoc p<0.01) during the two weeks before and after peak larval release (planulation), suggesting that the activity of this enzyme family may be linked to the reproductive state of the <span class="hlt">coral</span>. Sulfotransferase enzymes could not be detected. Our findings provide the first data defining normal physiological and lunar/reproductive variability in steroidal enzymes in a <span class="hlt">coral</span> species with respect to their potential role in <span class="hlt">coral</span> reproduction. Copyright © 2015 Elsevier Inc. All rights reserved.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3436891','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3436891"><span>Assessing <span class="hlt">Coral</span> <span class="hlt">Reefs</span> on a Pacific-Wide Scale Using the Microbialization Score</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>McDole, Tracey; Nulton, James; Barott, Katie L.; Felts, Ben; Hand, Carol; Hatay, Mark; Lee, Hochul; Nadon, Marc O.; Nosrat, Bahador; Salamon, Peter; Bailey, Barbara; Sandin, Stuart A.; Vargas-Angel, Bernardo; Youle, Merry; Zgliczynski, Brian J.; Brainard, Russell E.; Rohwer, Forest</p> <p>2012-01-01</p> <p>The majority of the world's <span class="hlt">coral</span> <span class="hlt">reefs</span> are in various stages of decline. While a suite of disturbances (overfishing, eutrophication, and global climate change) have been identified, the mechanism(s) of <span class="hlt">reef</span> system decline remain elusive. Increased microbial and viral loading with higher percentages of opportunistic and specific microbial pathogens have been identified as potentially unifying features of <span class="hlt">coral</span> <span class="hlt">reefs</span> in decline. Due to their relative size and high per cell activity, a small change in microbial biomass may signal a large reallocation of available energy in an <span class="hlt">ecosystem</span>; that is the microbialization of the <span class="hlt">coral</span> <span class="hlt">reef</span>. Our hypothesis was that human activities alter the energy budget of the <span class="hlt">reef</span> system, specifically by altering the allocation of metabolic energy between microbes and macrobes. To determine if this is occurring on a regional scale, we calculated the basal metabolic rates for the fish and microbial communities at 99 sites on twenty-nine <span class="hlt">coral</span> islands throughout the Pacific Ocean using previously established scaling relationships. From these metabolic rate predictions, we derived a new metric for assessing and comparing <span class="hlt">reef</span> health called the microbialization score. The microbialization score represents the percentage of the combined fish and microbial predicted metabolic rate that is microbial. Our results demonstrate a strong positive correlation between <span class="hlt">reef</span> microbialization scores and human impact. In contrast, microbialization scores did not significantly correlate with ocean net primary production, local chla concentrations, or the combined metabolic rate of the fish and microbial communities. These findings support the hypothesis that human activities are shifting energy to the microbes, at the expense of the macrobes. Regardless of oceanographic context, the microbialization score is a powerful metric for assessing the level of human impact a <span class="hlt">reef</span> system is experiencing. PMID:22970122</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22970122','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22970122"><span>Assessing <span class="hlt">coral</span> <span class="hlt">reefs</span> on a Pacific-wide scale using the microbialization score.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>McDole, Tracey; Nulton, James; Barott, Katie L; Felts, Ben; Hand, Carol; Hatay, Mark; Lee, Hochul; Nadon, Marc O; Nosrat, Bahador; Salamon, Peter; Bailey, Barbara; Sandin, Stuart A; Vargas-Angel, Bernardo; Youle, Merry; Zgliczynski, Brian J; Brainard, Russell E; Rohwer, Forest</p> <p>2012-01-01</p> <p>The majority of the world's <span class="hlt">coral</span> <span class="hlt">reefs</span> are in various stages of decline. While a suite of disturbances (overfishing, eutrophication, and global climate change) have been identified, the mechanism(s) of <span class="hlt">reef</span> system decline remain elusive. Increased microbial and viral loading with higher percentages of opportunistic and specific microbial pathogens have been identified as potentially unifying features of <span class="hlt">coral</span> <span class="hlt">reefs</span> in decline. Due to their relative size and high per cell activity, a small change in microbial biomass may signal a large reallocation of available energy in an <span class="hlt">ecosystem</span>; that is the microbialization of the <span class="hlt">coral</span> <span class="hlt">reef</span>. Our hypothesis was that human activities alter the energy budget of the <span class="hlt">reef</span> system, specifically by altering the allocation of metabolic energy between microbes and macrobes. To determine if this is occurring on a regional scale, we calculated the basal metabolic rates for the fish and microbial communities at 99 sites on twenty-nine <span class="hlt">coral</span> islands throughout the Pacific Ocean using previously established scaling relationships. From these metabolic rate predictions, we derived a new metric for assessing and comparing <span class="hlt">reef</span> health called the microbialization score. The microbialization score represents the percentage of the combined fish and microbial predicted metabolic rate that is microbial. Our results demonstrate a strong positive correlation between <span class="hlt">reef</span> microbialization scores and human impact. In contrast, microbialization scores did not significantly correlate with ocean net primary production, local chla concentrations, or the combined metabolic rate of the fish and microbial communities. These findings support the hypothesis that human activities are shifting energy to the microbes, at the expense of the macrobes. Regardless of oceanographic context, the microbialization score is a powerful metric for assessing the level of human impact a <span class="hlt">reef</span> system is experiencing.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28809933','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28809933"><span>Using light-dependent scleractinia to define the upper boundary of mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> on the <span class="hlt">reefs</span> of Utila, Honduras.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Laverick, Jack H; Andradi-Brown, Dominic A; Rogers, Alex D</p> <p>2017-01-01</p> <p>Shallow water zooxanthellate <span class="hlt">coral</span> <span class="hlt">reefs</span> grade into ecologically distinct mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> (MCEs) deeper in the euphotic zone. MCEs are widely considered to start at an absolute depth limit of 30m deep, possibly failing to recognise that these are distinct ecological communities that may shift shallower or deeper depending on local environmental conditions. This study aimed to explore whether MCEs represent distinct biological communities, the upper boundary of which can be defined and whether the depth at which they occur may vary above or below 30m. Mixed-gas diving and closed-circuit rebreathers were used to quantitatively survey benthic communities across shallow to mesophotic <span class="hlt">reef</span> gradients around the island of Utila, Honduras. Depths of up to 85m were sampled, covering the vertical range of the zooxanthellate <span class="hlt">corals</span> around Utila. We investigate vertical <span class="hlt">reef</span> zonation using a variety of ecological metrics to identify community shifts with depth, and the appropriateness of different metrics to define the upper MCE boundary. Patterns observed in scleractinian community composition varied between ordination analyses and approaches utilising biodiversity indices. Indices and richness approaches revealed vertical community transition was a gradation. Ordination approaches suggest the possibility of recognising two scleractinian assemblages. We could detect a mesophotic and shallow community while illustrating that belief in a static depth limit is biologically unjustified. The switch between these two communities occurred across bathymetric gradients as small as 10m and as large as 50m in depth. The difference between communities appears to be a loss of shallow specialists and increase in depth-generalist taxa. Therefore, it may be possible to define MCEs by a loss of shallow specialist species. To support a biological definition of mesophotic <span class="hlt">reefs</span>, we advocate this analytical framework should be applied around the Caribbean and extended into other</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21991366','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21991366"><span>High macroalgal cover and low <span class="hlt">coral</span> recruitment undermines the potential resilience of the world's southernmost <span class="hlt">coral</span> <span class="hlt">reef</span> assemblages.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Hoey, Andrew S; Pratchett, Morgan S; Cvitanovic, Christopher</p> <p>2011-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are under increasing pressure from anthropogenic and climate-induced stressors. The ability of <span class="hlt">reefs</span> to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of <span class="hlt">coral</span> populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical <span class="hlt">reefs</span>. To assess the potential resilience of the benthic <span class="hlt">reef</span> assemblages of Lord Howe Island (31°32'S, 159°04'E), the worlds' southernmost <span class="hlt">coral</span> <span class="hlt">reef</span>, we quantified the benthic composition, densities of juvenile <span class="hlt">corals</span> (as a proxy for <span class="hlt">coral</span> recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian <span class="hlt">corals</span> (mean cover 37.4%) and fleshy macroalgae (20.9%). Live <span class="hlt">coral</span> cover was higher than in most other subtropical <span class="hlt">reefs</span> and directly comparable to lower latitude tropical <span class="hlt">reefs</span>. Juvenile <span class="hlt">coral</span> densities (0.8 ind.m(-2)), however, were 5-200 times lower than those reported for tropical <span class="hlt">reefs</span>. Overall, macroalgal cover was negatively related to the cover of live <span class="hlt">coral</span> and the density of juvenile <span class="hlt">corals</span>, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha(-1)), and in marked contrast to tropical <span class="hlt">reefs</span> was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile <span class="hlt">corals</span> and the cover of bare substrata, suggesting that they may enhance the recruitment of <span class="hlt">corals</span> through the provision of suitable settlement sites. Although Lord Howe Islands' <span class="hlt">reefs</span> are currently <span class="hlt">coral</span>-dominated, the high macroalgal cover, coupled with limited <span class="hlt">coral</span> recruitment and low <span class="hlt">coral</span> growth rates suggest these <span class="hlt">reefs</span> may be extremely susceptible to future disturbances.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3185058','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3185058"><span>High Macroalgal Cover and Low <span class="hlt">Coral</span> Recruitment Undermines the Potential Resilience of the World's Southernmost <span class="hlt">Coral</span> <span class="hlt">Reef</span> Assemblages</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Hoey, Andrew S.; Pratchett, Morgan S.; Cvitanovic, Christopher</p> <p>2011-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are under increasing pressure from anthropogenic and climate-induced stressors. The ability of <span class="hlt">reefs</span> to reassemble and regenerate after disturbances (i.e., resilience) is largely dependent on the capacity of herbivores to prevent macroalgal expansion, and the replenishment of <span class="hlt">coral</span> populations through larval recruitment. Currently there is a paucity of this information for higher latitude, subtropical <span class="hlt">reefs</span>. To assess the potential resilience of the benthic <span class="hlt">reef</span> assemblages of Lord Howe Island (31°32′S, 159°04′E), the worlds' southernmost <span class="hlt">coral</span> <span class="hlt">reef</span>, we quantified the benthic composition, densities of juvenile <span class="hlt">corals</span> (as a proxy for <span class="hlt">coral</span> recruitment), and herbivorous fish communities. Despite some variation among habitats and sites, benthic communities were dominated by live scleractinian <span class="hlt">corals</span> (mean cover 37.4%) and fleshy macroalgae (20.9%). Live <span class="hlt">coral</span> cover was higher than in most other subtropical <span class="hlt">reefs</span> and directly comparable to lower latitude tropical <span class="hlt">reefs</span>. Juvenile <span class="hlt">coral</span> densities (0.8 ind.m−2), however, were 5–200 times lower than those reported for tropical <span class="hlt">reefs</span>. Overall, macroalgal cover was negatively related to the cover of live <span class="hlt">coral</span> and the density of juvenile <span class="hlt">corals</span>, but displayed no relationship with herbivorous fish biomass. The biomass of herbivorous fishes was relatively low (204 kg.ha−1), and in marked contrast to tropical <span class="hlt">reefs</span> was dominated by macroalgal browsing species (84.1%) with relatively few grazing species. Despite their extremely low biomass, grazing fishes were positively related to both the density of juvenile <span class="hlt">corals</span> and the cover of bare substrata, suggesting that they may enhance the recruitment of <span class="hlt">corals</span> through the provision of suitable settlement sites. Although Lord Howe Islands' <span class="hlt">reefs</span> are currently <span class="hlt">coral</span>-dominated, the high macroalgal cover, coupled with limited <span class="hlt">coral</span> recruitment and low <span class="hlt">coral</span> growth rates suggest these <span class="hlt">reefs</span> may be extremely susceptible to future disturbances. PMID:21991366</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2017CorRe..36..561D','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2017CorRe..36..561D"><span>Relationships between structural complexity, <span class="hlt">coral</span> traits, and <span class="hlt">reef</span> fish assemblages</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Darling, Emily S.; Graham, Nicholas A. J.; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.; Pratchett, Morgan S.; Wilson, Shaun K.</p> <p>2017-06-01</p> <p>With the ongoing loss of <span class="hlt">coral</span> cover and the associated flattening of <span class="hlt">reef</span> architecture, understanding the links between <span class="hlt">coral</span> habitat and <span class="hlt">reef</span> fishes is of critical importance. Here, we investigate whether considering <span class="hlt">coral</span> traits and functional diversity provides new insights into the relationship between structural complexity and <span class="hlt">reef</span> fish communities, and whether <span class="hlt">coral</span> traits and community composition can predict structural complexity. Across 157 sites in Seychelles, Maldives, the Chagos Archipelago, and Australia's Great Barrier <span class="hlt">Reef</span>, we find that structural complexity and <span class="hlt">reef</span> zone are the strongest and most consistent predictors of <span class="hlt">reef</span> fish abundance, biomass, species richness, and trophic structure. However, <span class="hlt">coral</span> traits, diversity, and life histories provided additional predictive power for models of <span class="hlt">reef</span> fish assemblages, and were key drivers of structural complexity. Our findings highlight that <span class="hlt">reef</span> complexity relies on living corals—with different traits and life histories—continuing to build carbonate skeletons, and that these nuanced relationships between <span class="hlt">coral</span> assemblages and habitat complexity can affect the structure of <span class="hlt">reef</span> fish assemblages. Seascape-level estimates of structural complexity are rapid and cost effective with important implications for the structure and function of fish assemblages, and should be incorporated into monitoring programs.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.epa.gov/cwa-404/coral-reef-guidance','PESTICIDES'); return false;" href="https://www.epa.gov/cwa-404/coral-reef-guidance"><span><span class="hlt">Coral</span> <span class="hlt">Reef</span> Guidance</span></a></p> <p><a target="_blank" href="http://www.epa.gov/pesticides/search.htm">EPA Pesticide Factsheets</a></p> <p></p> <p></p> <p>Guidance prepared by EPA and Army Corps of Engineers concerning <span class="hlt">coral</span> <span class="hlt">reef</span> protection under the Clean Water Act, Marine Protection, Research, and Sanctuaries Act, Rivers and Harbors Act, and Federal Project Authorities.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70027052','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70027052"><span><span class="hlt">Coral</span> <span class="hlt">reef</span> complexes at an atypical windward platform margin: Late Quaternary, southeast Florida</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Lidz, B.H.</p> <p>2004-01-01</p> <p>Major <span class="hlt">coral</span> <span class="hlt">reef</span> complexes rim many modern and ancient carbonate platforms. Their role in margin evolution is not fully understood, particularly when they border a margin atypical of the classic model. Classic windward margins are steeply inclined. The windward margin of southeast Florida is distinct with a very low-gradient slope and a shelf edge ringed with 30-m-high Quaternary outlier <span class="hlt">reefs</span> on a shallow upper-slope terrace. A newly developed synthesis of temporally well-constrained geologic events is used with surface and subsurface seismic-reflection contours to construct morphogenetic models of four discontinuous <span class="hlt">reef</span>-complex sequences. The models show uneven subsurface topography, upward and landward buildups, and a previously unreported, rapid, Holocene progradation. The terms backstepped <span class="hlt">reef</span>-complex margin, backfilled prograded margin, and coalesced <span class="hlt">reef</span>-complex margin are proposed for sections exhibiting suitable signatures in the stratigraphic record. The models have significant implications for interpretation of ancient analogues. The Florida record chronicles four kinds of geologic events. (1) Thirteen transgressions high enough for marine deposition occurred between ca. 325 ka and the present. Six gave rise to stratigraphically successive <span class="hlt">coral</span> <span class="hlt">reef</span> complexes between ca. 185 and ca. 77.8 ka. The seventh <span class="hlt">reef</span> <span class="hlt">ecosystem</span> is Holocene. (2) Two primary <span class="hlt">coral</span> <span class="hlt">reef</span> architectures built the outer shelf and margin, producing respective ridge-and-swale and <span class="hlt">reef</span>-and-trough geometries of very different scales. (3) Massive outlier <span class="hlt">reefs</span> developed on an upper-slope terrace between ca. 106.5 and ca. 80 ka and are inferred to contain <span class="hlt">corals</span> that would date to highstands at ca. 140 and 125 ka. (4) Sea level remained below elevation of the shelf between ca. 77.8 and ca. 9.6 ka. ?? 2004 Geological Society of America.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25146281','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25146281"><span><span class="hlt">Reef</span> ecology. Chemically mediated behavior of recruiting <span class="hlt">corals</span> and fishes: a tipping point that may limit <span class="hlt">reef</span> recovery.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Dixson, Danielle L; Abrego, David; Hay, Mark E</p> <p>2014-08-22</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are in global decline, converting from dominance by <span class="hlt">coral</span> to dominance by seaweed. Once seaweeds become abundant, <span class="hlt">coral</span> recovery is suppressed unless herbivores return to remove seaweeds, and <span class="hlt">corals</span> then recruit. Variance in the recovery of fishes and <span class="hlt">corals</span> is not well understood. We show that juveniles of both <span class="hlt">corals</span> and fishes are repelled by chemical cues from fished, seaweed-dominated <span class="hlt">reefs</span> but attracted to cues from <span class="hlt">coral</span>-dominated areas where fishing is prohibited. Chemical cues of specific seaweeds from degraded <span class="hlt">reefs</span> repulsed recruits, and cues from specific <span class="hlt">corals</span> that are typical of healthy <span class="hlt">reefs</span> attracted recruits. Juveniles were present at but behaviorally avoided recruiting to degraded <span class="hlt">reefs</span> dominated by seaweeds. For recovery, degraded <span class="hlt">reefs</span> may need to be managed to produce cues that attract, rather than repel, recruiting <span class="hlt">corals</span> and fishes. Copyright © 2014, American Association for the Advancement of Science.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26445656','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26445656"><span>Indices for assessing <span class="hlt">coral</span> <span class="hlt">reef</span> fish biodiversity: the need for a change in habits.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Loiseau, Nicolas; Gaertner, Jean-Claude</p> <p>2015-09-01</p> <p>We present the first representative and quantified overview of the indices used worldwide for assessing the biodiversity of <span class="hlt">coral</span> <span class="hlt">reef</span> fishes. On this basis, we discuss the suitability and drawbacks of the indices most widely used in the assessment of <span class="hlt">coral</span> fish biodiversity. An extensive and systematic survey of the literature focused on <span class="hlt">coral</span> <span class="hlt">reef</span> fish biodiversity was conducted from 1990 up to the present. We found that the multicomponent aspect of biodiversity, which is considered as a key feature of biodiversity for numerous terrestrial and marine <span class="hlt">ecosystems</span>, has been poorly taken into account in <span class="hlt">coral</span> <span class="hlt">reef</span> fish studies. Species richness is still strongly dominant while other diversity components, such as functional diversity, are underestimated even when functional information is available. We also demonstrate that the reason for choosing particular indices is often unclear, mainly based on empirical rationales and/or the reproduction of widespread habits, but generally with no clear relevance with regard to the aims of the studies. As a result, the most widely used indices (species richness, Shannon, etc.) would appear to be poorly suited to meeting the main challenges facing the monitoring of <span class="hlt">coral</span> <span class="hlt">reef</span> fish biodiversity in the future. Our results clearly show that <span class="hlt">coral</span> <span class="hlt">reef</span> scientists should rather take advantage of the multicomponent aspect of biodiversity. To facilitate this approach, we propose general guidelines to serve as a basis for the selection of indices that provide complementary and relevant information for monitoring the response of <span class="hlt">coral</span> <span class="hlt">reef</span> fish biodiversity in the face of structuring factors (natural or anthropic). The aim of these guidelines was to achieve a better match between the properties of the selected indices and the context of each study (e.g. expected effect of the main structuring factors, nature of data available).</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5124095','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5124095"><span>Enhanced macroboring and depressed calcification drive net dissolution at high-CO2 <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Manzello, Derek P.; Kolodziej, Graham; Noonan, Sam H. C.; Valentino, Lauren; Fabricius, Katharina E.</p> <p>2016-01-01</p> <p>Ocean acidification (OA) impacts the physiology of diverse marine taxa; among them <span class="hlt">corals</span> that create complex <span class="hlt">reef</span> framework structures. Biological processes operating on <span class="hlt">coral</span> <span class="hlt">reef</span> frameworks remain largely unknown from naturally high-carbon-dioxide (CO2) <span class="hlt">ecosystems</span>. For the first time, we independently quantified the response of multiple functional groups instrumental in the construction and erosion of these frameworks (accretion, macroboring, microboring, and grazing) along natural OA gradients. We deployed blocks of dead <span class="hlt">coral</span> skeleton for roughly 2 years at two <span class="hlt">reefs</span> in Papua New Guinea, each experiencing volcanically enriched CO2, and employed high-resolution micro-computed tomography (micro-CT) to create three-dimensional models of changing skeletal structure. OA conditions were correlated with decreased calcification and increased macroboring, primarily by annelids, representing a group of bioeroders not previously known to respond to OA. Incubation of these blocks, using the alkalinity anomaly methodology, revealed a switch from net calcification to net dissolution at a pH of roughly 7.8, within Intergovernmental Panel on Climate Change's (IPCC) predictions for global ocean waters by the end of the century. Together these data represent the first comprehensive experimental study of bioerosion and calcification from a naturally high-CO2 <span class="hlt">reef</span> <span class="hlt">ecosystem</span>, where the processes of accelerated erosion and depressed calcification have combined to alter the permanence of this essential framework habitat. PMID:27852802</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_20");'>20</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li class="active"><span>22</span></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_22 --> <div id="page_23" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li class="active"><span>23</span></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="441"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/27852802','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/27852802"><span>Enhanced macroboring and depressed calcification drive net dissolution at high-CO2 <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Enochs, Ian C; Manzello, Derek P; Kolodziej, Graham; Noonan, Sam H C; Valentino, Lauren; Fabricius, Katharina E</p> <p>2016-11-16</p> <p>Ocean acidification (OA) impacts the physiology of diverse marine taxa; among them <span class="hlt">corals</span> that create complex <span class="hlt">reef</span> framework structures. Biological processes operating on <span class="hlt">coral</span> <span class="hlt">reef</span> frameworks remain largely unknown from naturally high-carbon-dioxide (CO 2 ) <span class="hlt">ecosystems</span>. For the first time, we independently quantified the response of multiple functional groups instrumental in the construction and erosion of these frameworks (accretion, macroboring, microboring, and grazing) along natural OA gradients. We deployed blocks of dead <span class="hlt">coral</span> skeleton for roughly 2 years at two <span class="hlt">reefs</span> in Papua New Guinea, each experiencing volcanically enriched CO 2 , and employed high-resolution micro-computed tomography (micro-CT) to create three-dimensional models of changing skeletal structure. OA conditions were correlated with decreased calcification and increased macroboring, primarily by annelids, representing a group of bioeroders not previously known to respond to OA. Incubation of these blocks, using the alkalinity anomaly methodology, revealed a switch from net calcification to net dissolution at a pH of roughly 7.8, within Intergovernmental Panel on Climate Change's (IPCC) predictions for global ocean waters by the end of the century. Together these data represent the first comprehensive experimental study of bioerosion and calcification from a naturally high-CO 2 <span class="hlt">reef</span> <span class="hlt">ecosystem</span>, where the processes of accelerated erosion and depressed calcification have combined to alter the permanence of this essential framework habitat. © 2016 The Authors.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19782832','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19782832"><span>The <span class="hlt">coral</span> <span class="hlt">reef</span> crisis: the critical importance of<350 ppm CO2.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Veron, J E N; Hoegh-Guldberg, O; Lenton, T M; Lough, J M; Obura, D O; Pearce-Kelly, P; Sheppard, C R C; Spalding, M; Stafford-Smith, M G; Rogers, A D</p> <p>2009-10-01</p> <p>Temperature-induced mass <span class="hlt">coral</span> bleaching causing mortality on a wide geographic scale started when atmospheric CO(2) levels exceeded approximately 320 ppm. When CO(2) levels reached approximately 340 ppm, sporadic but highly destructive mass bleaching occurred in most <span class="hlt">reefs</span> world-wide, often associated with El Niño events. Recovery was dependent on the vulnerability of individual <span class="hlt">reef</span> areas and on the <span class="hlt">reef</span>'s previous history and resilience. At today's level of approximately 387 ppm, allowing a lag-time of 10 years for sea temperatures to respond, most <span class="hlt">reefs</span> world-wide are committed to an irreversible decline. Mass bleaching will in future become annual, departing from the 4 to 7 years return-time of El Niño events. Bleaching will be exacerbated by the effects of degraded water-quality and increased severe weather events. In addition, the progressive onset of ocean acidification will cause reduction of <span class="hlt">coral</span> growth and retardation of the growth of high magnesium calcite-secreting coralline algae. If CO(2) levels are allowed to reach 450 ppm (due to occur by 2030-2040 at the current rates), <span class="hlt">reefs</span> will be in rapid and terminal decline world-wide from multiple synergies arising from mass bleaching, ocean acidification, and other environmental impacts. Damage to shallow <span class="hlt">reef</span> communities will become extensive with consequent reduction of biodiversity followed by extinctions. <span class="hlt">Reefs</span> will cease to be large-scale nursery grounds for fish and will cease to have most of their current value to humanity. There will be knock-on effects to <span class="hlt">ecosystems</span> associated with <span class="hlt">reefs</span>, and to other pelagic and benthic <span class="hlt">ecosystems</span>. Should CO(2) levels reach 600 ppm <span class="hlt">reefs</span> will be eroding geological structures with populations of surviving biota restricted to refuges. Domino effects will follow, affecting many other marine <span class="hlt">ecosystems</span>. This is likely to have been the path of great mass extinctions of the past, adding to the case that anthropogenic CO(2) emissions could trigger the Earth's sixth</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26590916','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26590916"><span>Tracing carbon flow through <span class="hlt">coral</span> <span class="hlt">reef</span> food webs using a compound-specific stable isotope approach.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>McMahon, Kelton W; Thorrold, Simon R; Houghton, Leah A; Berumen, Michael L</p> <p>2016-03-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> support spectacularly productive and diverse communities in tropical and sub-tropical waters throughout the world's oceans. Debate continues, however, on the degree to which <span class="hlt">reef</span> biomass is supported by new water column production, benthic primary production, and recycled detrital carbon (C). We coupled compound-specific stable C isotope ratio (δ(13)C) analyses with Bayesian mixing models to quantify C flow from primary producers to <span class="hlt">coral</span> <span class="hlt">reef</span> fishes across multiple feeding guilds and trophic positions in the Red Sea. Analyses of <span class="hlt">reef</span> fishes with putative diets composed primarily of zooplankton (Amblyglyphidodon indicus), benthic macroalgae (Stegastes nigricans), <span class="hlt">reef</span>-associated detritus (Ctenochaetus striatus), and <span class="hlt">coral</span> tissue (Chaetodon trifascialis) confirmed that δ(13)C values of essential amino acids from all baseline C sources were both isotopically diagnostic and accurately recorded in consumer tissues. While all four source end-members contributed to the production of <span class="hlt">coral</span> <span class="hlt">reef</span> fishes in our study, a single-source end-member often dominated dietary C assimilation of a given species, even for highly mobile, generalist top predators. Microbially reworked detritus was an important secondary C source for most species. Seascape configuration played an important role in structuring resource utilization patterns. For instance, Lutjanus ehrenbergii showed a significant shift from a benthic macroalgal food web on shelf <span class="hlt">reefs</span> (71 ± 13 % of dietary C) to a phytoplankton-based food web (72 ± 11 %) on oceanic <span class="hlt">reefs</span>. Our work provides insights into the roles that diverse C sources play in the structure and function of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> and illustrates a powerful fingerprinting method to develop and test nutritional frameworks for understanding resource utilization.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://files.eric.ed.gov/fulltext/ED491455.pdf','ERIC'); return false;" href="http://files.eric.ed.gov/fulltext/ED491455.pdf"><span><span class="hlt">Coral</span> <span class="hlt">Reef</span> Education and Australian High School Students</span></a></p> <p><a target="_blank" href="http://www.eric.ed.gov/ERICWebPortal/search/extended.jsp?_pageLabel=advanced">ERIC Educational Resources Information Center</a></p> <p>Stepath, Carl M.</p> <p>2004-01-01</p> <p>Educational programs that focus on humans and their relationship to <span class="hlt">coral</span> <span class="hlt">reefs</span> are becoming necessary, as <span class="hlt">reef</span> structures along the Queensland coast come under mounting ecological pressure. This paper reports on a PhD research project which investigated marine education and learning with high school students in <span class="hlt">coral</span> <span class="hlt">reef</span> environments along the…</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5411493','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5411493"><span>Differential Impacts of Land-Based Sources of Pollution on the Microbiota of Southeast Florida <span class="hlt">Coral</span> <span class="hlt">Reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Staley, Christopher; Kaiser, Thomas; Gidley, Maribeth L.; Enochs, Ian C.; Jones, Paul R.; Goodwin, Kelly D.; Sinigalliano, Christopher D.</p> <p>2017-01-01</p> <p>ABSTRACT <span class="hlt">Coral</span> <span class="hlt">reefs</span> are dynamic <span class="hlt">ecosystems</span> known for decades to be endangered due, in large part, to anthropogenic impacts from land-based sources of pollution (LBSP). In this study, we utilized an Illumina-based next-generation sequencing approach to characterize prokaryotic and fungal communities from samples collected off the southeast coast of Florida. Water samples from coastal inlet discharges, oceanic outfalls of municipal wastewater treatment plants, treated wastewater effluent before discharge, open ocean samples, and <span class="hlt">coral</span> tissue samples (mucus and polyps) were characterized to determine the relationships between microbial communities in these matrices and those in <span class="hlt">reef</span> water and <span class="hlt">coral</span> tissues. Significant differences in microbial communities were noted among all sample types but varied between sampling areas. Contamination from outfalls was found to be the greatest potential source of LBSP influencing native microbial community structure among all <span class="hlt">reef</span> samples, although pollution from inlets was also noted. Notably, <span class="hlt">reef</span> water and <span class="hlt">coral</span> tissue communities were found to be more greatly impacted by LBSP at southern <span class="hlt">reefs</span>, which also experienced the most degradation during the course of the study. The results of this study provide new insights into how microbial communities from LBSP can impact <span class="hlt">coral</span> <span class="hlt">reefs</span> in southeast Florida and suggest that wastewater outfalls may have a greater influence on the microbial diversity and structure of these <span class="hlt">reef</span> communities than do contaminants carried in runoff, although the influences of runoff and coastal inlet discharge on <span class="hlt">coral</span> <span class="hlt">reefs</span> are still substantial. IMPORTANCE <span class="hlt">Coral</span> <span class="hlt">reefs</span> are known to be endangered due to sewage discharge and to runoff of nutrients, pesticides, and other substances associated with anthropogenic activity. Here, we used next-generation sequencing to characterize the microbial communities of potential contaminant sources in order to determine how environmental discharges of microbiota and their</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28341673','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28341673"><span>Differential Impacts of Land-Based Sources of Pollution on the Microbiota of Southeast Florida <span class="hlt">Coral</span> <span class="hlt">Reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Staley, Christopher; Kaiser, Thomas; Gidley, Maribeth L; Enochs, Ian C; Jones, Paul R; Goodwin, Kelly D; Sinigalliano, Christopher D; Sadowsky, Michael J; Chun, Chan Lan</p> <p>2017-05-15</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are dynamic <span class="hlt">ecosystems</span> known for decades to be endangered due, in large part, to anthropogenic impacts from land-based sources of pollution (LBSP). In this study, we utilized an Illumina-based next-generation sequencing approach to characterize prokaryotic and fungal communities from samples collected off the southeast coast of Florida. Water samples from coastal inlet discharges, oceanic outfalls of municipal wastewater treatment plants, treated wastewater effluent before discharge, open ocean samples, and <span class="hlt">coral</span> tissue samples (mucus and polyps) were characterized to determine the relationships between microbial communities in these matrices and those in <span class="hlt">reef</span> water and <span class="hlt">coral</span> tissues. Significant differences in microbial communities were noted among all sample types but varied between sampling areas. Contamination from outfalls was found to be the greatest potential source of LBSP influencing native microbial community structure among all <span class="hlt">reef</span> samples, although pollution from inlets was also noted. Notably, <span class="hlt">reef</span> water and <span class="hlt">coral</span> tissue communities were found to be more greatly impacted by LBSP at southern <span class="hlt">reefs</span>, which also experienced the most degradation during the course of the study. The results of this study provide new insights into how microbial communities from LBSP can impact <span class="hlt">coral</span> <span class="hlt">reefs</span> in southeast Florida and suggest that wastewater outfalls may have a greater influence on the microbial diversity and structure of these <span class="hlt">reef</span> communities than do contaminants carried in runoff, although the influences of runoff and coastal inlet discharge on <span class="hlt">coral</span> <span class="hlt">reefs</span> are still substantial. IMPORTANCE <span class="hlt">Coral</span> <span class="hlt">reefs</span> are known to be endangered due to sewage discharge and to runoff of nutrients, pesticides, and other substances associated with anthropogenic activity. Here, we used next-generation sequencing to characterize the microbial communities of potential contaminant sources in order to determine how environmental discharges of microbiota and their genetic</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29773843','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29773843"><span>Loss of live <span class="hlt">coral</span> compromises predator-avoidance behaviour in <span class="hlt">coral</span> <span class="hlt">reef</span> damselfish.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Boström-Einarsson, Lisa; Bonin, Mary C; Munday, Philip L; Jones, Geoffrey P</p> <p>2018-05-17</p> <p>Tropical <span class="hlt">reefs</span> have experienced an unprecedented loss of live <span class="hlt">coral</span> in the past few decades and the biodiversity of <span class="hlt">coral</span>-dependent species is under threat. Many <span class="hlt">reef</span> fish species decline in abundance as <span class="hlt">coral</span> cover is lost, yet the mechanisms responsible for these losses are largely unknown. A commonly hypothesised cause of fish decline is the loss of shelter space between branches as dead <span class="hlt">corals</span> become overgrown by algae. Here we tested this hypothesis by quantifying changes in predator-avoidance behaviour of a common damselfish, Pomacentrus moluccensis, before and after the death of their <span class="hlt">coral</span> colony. Groups of P. moluccensis were placed on either healthy or degraded <span class="hlt">coral</span> colonies, startled using a visual stimulus and their sheltering responses compared over a 7-week period. P. moluccensis stopped sheltering amongst the <span class="hlt">coral</span> branches immediately following the death of the <span class="hlt">coral</span>, despite the presence of ample shelter space. Instead, most individuals swam away from the dead <span class="hlt">coral</span>, potentially increasing their exposure to predators. It appears that the presence of live <span class="hlt">coral</span> rather than shelter per se is the necessary cue that elicits the appropriate behavioural response to potential predators. The disruption of this link poses an immediate threat to <span class="hlt">coral</span>-associated fishes on degrading <span class="hlt">reefs</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70030897','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70030897"><span>Ecological characteristics of <span class="hlt">coral</span> patch <span class="hlt">reefs</span> at Midway Atoll, Northwestern Hawaiian Islands</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Schroeder, R.E.; Parrish, J.D.</p> <p>2006-01-01</p> <p>Ecological aspects of <span class="hlt">coral</span> patch <span class="hlt">reefs</span> were studied from 1981 to 1985 in Welles Harbor, Midway Atoll. Water temperatures varied from 17??C in February to 28??C in August. Sizes of <span class="hlt">reefs</span> studied were described by mean area (59 m2), mean volume (52 m3), vertical relief (<1 m), and inter-<span class="hlt">reef</span> isolation (100 m). Considerable temporal change in <span class="hlt">reef</span> size occurred due to large winter swells shifting bottom sand. Six common species accounted for 70% of all individual fish visually censused over 4 years. Overall fish assemblage composition ranged from 11 to 46 fish/10 m2, from 3 to 14 species. Numerical abundance and species richness for all fish (pooled) strongly correlated with physical <span class="hlt">reef</span> substrate characteristics of area, volume, and vertical relief during summer. Species diversity (H') was not correlated with the substrate variables, suggesting similarity in the structure of fish communities among different sizes of patch <span class="hlt">reefs</span>. Daily surveillance for presence of large transient taxa suggested that visits by sharks, large jacks, monk seals, sea turtles, and dolphins were infrequent. Density estimates were made for all conspicuous invertebrate megafauna during initial and final assessments. Six common taxa provided 90% of these counts; nearly half were sea urchins. Percent cover also was recorded for <span class="hlt">coral</span> and algal species on the patch <span class="hlt">reefs</span>. Cover by live <span class="hlt">coral</span> was low (about 7%) and dominated by a few species. Mean algal cover ranged from 32 to 77%. Such information on ecological characteristics of <span class="hlt">reefs</span> may aid in understanding complex ecological processes and provides an earlier reference for current <span class="hlt">ecosystem</span> studies.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/18557772','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/18557772"><span>Gradients of coastal fish farm effluents and their effect on <span class="hlt">coral</span> <span class="hlt">reef</span> microbes.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Garren, Melissa; Smriga, Steven; Azam, Farooq</p> <p>2008-09-01</p> <p>Coastal milkfish (Chanos chanos) farming may be a source of organic matter enrichment for <span class="hlt">coral</span> <span class="hlt">reefs</span> in Bolinao, Republic of the Philippines. Interactions among microbial communities associated with the water column, <span class="hlt">corals</span> and milkfish feces can provide insight into the <span class="hlt">ecosystem</span>'s response to enrichment. Samples were collected at sites along a transect that extended from suspended milkfish pens into the <span class="hlt">coral</span> <span class="hlt">reef</span>. Water was characterized by steep gradients in the concentrations of dissolved organic carbon (70-160 microM), total dissolved nitrogen (7-40 microM), chlorophyll a (0.25-10 microg l(-1)), particulate matter (106-832 microg l(-1)), bacteria (5 x 10(5)-1 x 10(6) cells ml(-1)) and viruses (1-7 x 10(7) ml(-1)) that correlated with distance from the fish cages. Particle-attached bacteria, which were observed by scanning laser confocal microscopy, increased across the gradient from < 0.1% to 5.6% of total bacteria at the fish pens. Analyses of 16S rRNA genes by denaturing gradient gel electrophoresis and environmental clone libraries revealed distinct microbial communities for each sample type. <span class="hlt">Coral</span> libraries had the greatest number of phyla represented (range: 6-8) while fish feces contained the lowest number (3). <span class="hlt">Coral</span> libraries also had the greatest number of 'novel' sequences (defined as < 93% similar to any sequence in the NCBI nt database; 29% compared with 3% and 5% in the feces and seawater libraries respectively). Despite the differences in microbial community composition, some 16S rRNA sequences co-occurred across sample types including Acinetobacter sp. and Ralstonia sp. Such patterns raise the question of whether bacteria might be transported from the fish pens to <span class="hlt">corals</span> or if microenvironments at the fish pens and on the <span class="hlt">corals</span> select for the same phylotypes. Understanding the underlying mechanisms of effluent-<span class="hlt">coral</span> interactions will help predict the ability of <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> to resist and rebound from organic matter enrichment.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2013BGeo...10.2467C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2013BGeo...10.2467C"><span>Groundwater and porewater as major sources of alkalinity to a fringing <span class="hlt">coral</span> <span class="hlt">reef</span> lagoon (Muri Lagoon, Cook Islands)</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Cyronak, T.; Santos, I. R.; Erler, D. V.; Eyre, B. D.</p> <p>2013-04-01</p> <p>To better predict how ocean acidification will affect <span class="hlt">coral</span> <span class="hlt">reefs</span>, it is important to understand how biogeochemical cycles on <span class="hlt">reefs</span> alter carbonate chemistry over various temporal and spatial scales. This study quantifies the contribution of shallow porewater exchange (as quantified from advective chamber incubations) and fresh groundwater discharge (as traced by 222Rn) to total alkalinity (TA) dynamics on a fringing <span class="hlt">coral</span> <span class="hlt">reef</span> lagoon along the southern Pacific island of Rarotonga over a tidal and diel cycle. Benthic alkalinity fluxes were affected by the advective circulation of water through permeable sediments, with net daily flux rates of carbonate alkalinity ranging from -1.55 to 7.76 mmol m-2 d-1, depending on the advection rate. Submarine groundwater discharge (SGD) was a source of TA to the lagoon, with the highest flux rates measured at low tide, and an average daily TA flux of 1080 mmol m-2 d-1 at the sampling site. Both sources of TA were important on a <span class="hlt">reef</span>-wide basis, although SGD acted solely as a delivery mechanism of TA to the lagoon, while porewater advection was either a sink or source of TA dependent on the time of day. This study describes overlooked sources of TA to <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> that can potentially alter water column carbonate chemistry. We suggest that porewater and groundwater fluxes of TA should be taken into account in ocean acidification models in order to properly address changing carbonate chemistry within <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19707616','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19707616"><span>Effects of solar ultraviolet radiation on <span class="hlt">coral</span> <span class="hlt">reef</span> organisms.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Banaszak, Anastazia T; Lesser, Michael P</p> <p>2009-09-01</p> <p>Organisms living in shallow-water tropical <span class="hlt">coral</span> <span class="hlt">reef</span> environments are exposed to high UVR irradiances due to the low solar zenith angles (the angle of the sun from the vertical), the natural thinness of the ozone layer over tropical latitudes, and the high transparency of the water column. The hypothesis that solar ultraviolet radiation (UVR, 290-400 nm) is an important factor that affects the biology and ecology of <span class="hlt">coral</span> <span class="hlt">reef</span> organisms dates only to about 1980. It has been previously suggested that increased levels of biologically effective ultraviolet B radiation (UVB, 290-320 nm), which is the waveband primarily affected by ozone depletion, would have relatively small effects on <span class="hlt">corals</span> and <span class="hlt">coral</span> <span class="hlt">reefs</span> and that these effects might be observed as changes in the minimum depths of occurrence of important <span class="hlt">reef</span> taxa such as <span class="hlt">corals</span>. This conclusion was based on predictions of increases in UVR as well as its attenuation with depth using the available data on UVR irradiances, ozone levels, and optical properties of the water overlying <span class="hlt">coral</span> <span class="hlt">reefs</span>. Here, we review the experimental evidence demonstrating the direct and indirect effects of UVR, both UVB and ultraviolet A (UVA, 320-400 nm) on <span class="hlt">corals</span> and other <span class="hlt">reef</span> associated biota, with emphasis on those studies conducted since 1996. Additionally, we re-examine the predictions made in 1996 for the increase in UVB on <span class="hlt">reefs</span> with currently available data, assess whether those predictions were reasonable, and look at what changes might occur on <span class="hlt">coral</span> <span class="hlt">reefs</span> in the future as the multiple effects (i.e. increased temperature, hypercapnia, and ocean acidification) of global climate change continue.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/22357590','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/22357590"><span>Integrating physiological and biomechanical drivers of population growth over environmental gradients on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Madin, Joshua S; Hoogenboom, Mia O; Connolly, Sean R</p> <p>2012-03-15</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> exhibit marked spatial and temporal variability, and <span class="hlt">coral</span> <span class="hlt">reef</span> organisms exhibit trade-offs in functional traits that influence demographic performance under different combinations of abiotic environmental conditions. In many systems, trait trade-offs are modelled using an energy and/or nutrient allocation framework. However, on <span class="hlt">coral</span> <span class="hlt">reefs</span>, differences in biomechanical vulnerability have major demographic implications, and indeed are believed to play an essential role in mediating species coexistence because highly competitive growth forms are vulnerable to physical dislodgment events that occur with high frequency (e.g. annual summer storms). Therefore, an integrated energy allocation and biomechanics framework is required to understand the effect of physical environmental gradients on species' demographic performance. However, on <span class="hlt">coral</span> <span class="hlt">reefs</span>, as in most <span class="hlt">ecosystems</span>, the effects of environmental conditions on organisms are measured in different currencies (e.g. lipid accumulation, survival and number of gametes), and thus the relative contributions of these effects to overall capacity for population growth are not readily apparent. A comprehensive assessment of links between the environment and the organism, including those mediated by biomechanical processes, must convert environmental effects on individual-level performance (e.g. survival, growth and reproduction) into a common currency that is relevant to the capacity to contribute to population growth. We outline such an approach by considering the population-level performance of scleractinian <span class="hlt">reef</span> <span class="hlt">corals</span> over a hydrodynamic gradient, with a focus on the integrating the biomechanical determinants of size-dependent <span class="hlt">coral</span> colony dislodgment as a function of flow, with the effects of flow on photosynthetic energy acquisition and respiration.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3037963','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3037963"><span>Spatial Patterns in Herbivory on a <span class="hlt">Coral</span> <span class="hlt">Reef</span> Are Influenced by Structural Complexity but Not by Algal Traits</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Vergés, Adriana; Vanderklift, Mathew A.; Doropoulos, Christopher; Hyndes, Glenn A.</p> <p>2011-01-01</p> <p>Background Patterns of herbivory can alter the spatial structure of <span class="hlt">ecosystems</span>, with important consequences for <span class="hlt">ecosystem</span> functions and biodiversity. While the factors that drive spatial patterns in herbivory in terrestrial systems are well established, comparatively less is known about what influences the distribution of herbivory in <span class="hlt">coral</span> <span class="hlt">reefs</span>. Methodology and Principal Findings We quantified spatial patterns of macroalgal consumption in a cross-section of Ningaloo <span class="hlt">Reef</span> (Western Australia). We used a combination of descriptive and experimental approaches to assess the influence of multiple macroalgal traits and structural complexity in establishing the observed spatial patterns in macroalgal herbivory, and to identify potential feedback mechanisms between herbivory and macroalgal nutritional quality. Spatial patterns in macroalgal consumption were best explained by differences in structural complexity among habitats. The biomass of herbivorous fish, and rates of herbivory were always greater in the structurally-complex <span class="hlt">coral</span>-dominated outer <span class="hlt">reef</span> and <span class="hlt">reef</span> flat habitats, which were also characterised by high biomass of herbivorous fish, low cover and biomass of macroalgae and the presence of unpalatable algae species. Macroalgal consumption decreased to undetectable levels within 75 m of structurally-complex <span class="hlt">reef</span> habitat, and algae were most abundant in the structurally-simple lagoon habitats, which were also characterised by the presence of the most palatable algae species. In contrast to terrestrial <span class="hlt">ecosystems</span>, herbivory patterns were not influenced by the distribution, productivity or nutritional quality of resources (macroalgae), and we found no evidence of a positive feedback between macroalgal consumption and the nitrogen content of algae. Significance This study highlights the importance of seascape-scale patterns in structural complexity in determining spatial patterns of macroalgal consumption by fish. Given the importance of herbivory in maintaining the</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26909426','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26909426"><span>Fine-scale environmental specialization of <span class="hlt">reef</span>-building <span class="hlt">corals</span> might be limiting <span class="hlt">reef</span> recovery in the Florida Keys.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kenkel, Carly D; Almanza, Albert T; Matz, Mikhail V</p> <p>2015-12-01</p> <p>Despite decades of monitoring global <span class="hlt">reef</span> decline, we are still largely unable to explain patterns of <span class="hlt">reef</span> deterioration at local scales, which precludes the development of effective management strategies. Offshore <span class="hlt">reefs</span> of the Florida Keys, USA, experience milder temperatures and lower nutrient loads in comparison to inshore <span class="hlt">reefs</span> yet remain considerably more degraded than nearshore patch <span class="hlt">reefs</span>. A year-long reciprocal transplant experiment of the mustard hill <span class="hlt">coral</span> (Porites astreoides) involving four source and eight transplant locations reveals that <span class="hlt">corals</span> adapt and/or acclimatize to their local habitat on a < 10-km scale. Surprisingly, transplantation to putatively similar environmental types (e.g., offshore <span class="hlt">corals</span> moved to a novel offshore site, or along-shore transplantation) resulted in greater reductions in fitness proxies, such as <span class="hlt">coral</span> growth, than cross-channel transplantation between inshore and offshore <span class="hlt">reefs</span>. The only abiotic factor showing significantly greater differences between along-shore sites was daily temperature range extremes (rather than the absolute high or low temperatures reached), providing a possible explanation for this pattern. Offshore-origin <span class="hlt">corals</span> exhibited significant growth reductions at sites with greater daily temperature ranges, which explained up to 39% of the variation in their mass gain. In contrast, daily temperature range explained at most 9% of growth variation in inshore-origin <span class="hlt">corals</span>, suggesting that inshore <span class="hlt">corals</span> are more tolerant of high-frequency temperature fluctuations. Finally, <span class="hlt">corals</span> incur trade-offs when specializing to their native <span class="hlt">reef</span>. Across <span class="hlt">reef</span> locations the coefficient of selection against <span class="hlt">coral</span> transplants was 0.07 ± 0.02 (mean ± SE). This selection against immigrants could hinder the ability of <span class="hlt">corals</span> to recolonize devastated <span class="hlt">reefs</span>, whether through assisted migration efforts or natural recruitment events, providing a unifying explanation for observed patterns of <span class="hlt">coral</span> decline in this <span class="hlt">reef</span> system.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5396851','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5396851"><span>Diet and condition of mesopredators on <span class="hlt">coral</span> <span class="hlt">reefs</span> in relation to shark abundance</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Meekan, Mark G.; Meeuwig, Jessica J.</p> <p>2017-01-01</p> <p><span class="hlt">Reef</span> sharks may influence the foraging behaviour of mesopredatory teleosts on <span class="hlt">coral</span> <span class="hlt">reefs</span> via both risk effects and competitive exclusion. We used a “natural experiment” to test the hypothesis that the loss of sharks on <span class="hlt">coral</span> <span class="hlt">reefs</span> can influence the diet and body condition of mesopredatory fishes by comparing two remote, atoll-like <span class="hlt">reef</span> systems, the Rowley Shoals and the Scott <span class="hlt">Reefs</span>, in northwestern Australia. The Rowley Shoals are a marine reserve where sharks are abundant, whereas at the Scott <span class="hlt">Reefs</span> numbers of sharks have been reduced by centuries of targeted fishing. On <span class="hlt">reefs</span> where sharks were rare, the gut contents of five species of mesopredatory teleosts largely contained fish while on <span class="hlt">reefs</span> with abundant sharks, the same mesopredatory species consumed a larger proportion of benthic invertebrates. These measures of diet were correlated with changes in body condition, such that the condition of mesopredatory teleosts was significantly poorer on <span class="hlt">reefs</span> with higher shark abundance. Condition was defined as body weight, height and width for a given length and also estimated via several indices of condition. Due to the nature of natural experiments, alternative explanations cannot be discounted. However, the results were consistent with the hypothesis that loss of sharks may influence the diet and condition of mesopredators and by association, their fecundity and trophic role. Regardless of the mechanism (risk effects, competitive release, or other), our findings suggest that overfishing of sharks has the potential to trigger trophic cascades on <span class="hlt">coral</span> <span class="hlt">reefs</span> and that further declines in shark populations globally should be prevented to protect <span class="hlt">ecosystem</span> health. PMID:28422965</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28422965','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28422965"><span>Diet and condition of mesopredators on <span class="hlt">coral</span> <span class="hlt">reefs</span> in relation to shark abundance.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Barley, Shanta C; Meekan, Mark G; Meeuwig, Jessica J</p> <p>2017-01-01</p> <p><span class="hlt">Reef</span> sharks may influence the foraging behaviour of mesopredatory teleosts on <span class="hlt">coral</span> <span class="hlt">reefs</span> via both risk effects and competitive exclusion. We used a "natural experiment" to test the hypothesis that the loss of sharks on <span class="hlt">coral</span> <span class="hlt">reefs</span> can influence the diet and body condition of mesopredatory fishes by comparing two remote, atoll-like <span class="hlt">reef</span> systems, the Rowley Shoals and the Scott <span class="hlt">Reefs</span>, in northwestern Australia. The Rowley Shoals are a marine reserve where sharks are abundant, whereas at the Scott <span class="hlt">Reefs</span> numbers of sharks have been reduced by centuries of targeted fishing. On <span class="hlt">reefs</span> where sharks were rare, the gut contents of five species of mesopredatory teleosts largely contained fish while on <span class="hlt">reefs</span> with abundant sharks, the same mesopredatory species consumed a larger proportion of benthic invertebrates. These measures of diet were correlated with changes in body condition, such that the condition of mesopredatory teleosts was significantly poorer on <span class="hlt">reefs</span> with higher shark abundance. Condition was defined as body weight, height and width for a given length and also estimated via several indices of condition. Due to the nature of natural experiments, alternative explanations cannot be discounted. However, the results were consistent with the hypothesis that loss of sharks may influence the diet and condition of mesopredators and by association, their fecundity and trophic role. Regardless of the mechanism (risk effects, competitive release, or other), our findings suggest that overfishing of sharks has the potential to trigger trophic cascades on <span class="hlt">coral</span> <span class="hlt">reefs</span> and that further declines in shark populations globally should be prevented to protect <span class="hlt">ecosystem</span> health.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29924857','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29924857"><span>Depth and <span class="hlt">coral</span> cover drive the distribution of a <span class="hlt">coral</span> macroborer across two <span class="hlt">reef</span> systems.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Maher, Rebecca L; Johnston, Michelle A; Brandt, Marilyn E; Smith, Tyler B; Correa, Adrienne M S</p> <p>2018-01-01</p> <p>Bioerosion, the removal of calcium carbonate from <span class="hlt">coral</span> frameworks by living organisms, influences a variety of <span class="hlt">reef</span> features, from their topographic complexity to the net balance of carbonate budgets. Little is known, however, about how macroborers, which bore into <span class="hlt">reef</span> substrates leaving traces greater than 0.1 mm diameter, are distributed across <span class="hlt">coral</span> <span class="hlt">reefs</span>, particularly <span class="hlt">reef</span> systems with high (>50%) stony <span class="hlt">coral</span> cover or at mesophotic depths (≥30 m). Here, we present an accurate and efficient method for quantifying macroborer densities from stony <span class="hlt">coral</span> hosts via image analysis, using the bioeroding barnacle, Lithotrya dorsalis, and its host <span class="hlt">coral</span>, Orbicella franksi, as a case study. We found that in 2014, L. dorsalis densities varied consistently with depth and host percent cover in two Atlantic <span class="hlt">reef</span> systems: the Flower Garden Banks (FGB, northwest Gulf of Mexico) and the U.S. Virgin Islands (USVI). Although average barnacle density was nearly 4.5 times greater overall in the FGB than in the USVI, barnacle density decreased with depth in both <span class="hlt">reef</span> regions. Barnacle density also scaled negatively with increasing <span class="hlt">coral</span> cover in the study areas, suggesting that barnacle populations are not strictly space-limited in their distribution and settlement opportunities. Our findings suggest that depth and host <span class="hlt">coral</span> cover, and potentially, local factors may strongly influence the abundance of macroborers, and thus the rate of CaCO3 loss, in a given <span class="hlt">reef</span> system. Our image analysis method for quantifying macroborers can be standardized across historical and modern <span class="hlt">reef</span> records to better understand how borers impact host growth and <span class="hlt">reef</span> health.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26704453','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26704453"><span>Predicting dredging-associated effects to <span class="hlt">coral</span> <span class="hlt">reefs</span> in Apra Harbor, Guam - Part 2: Potential <span class="hlt">coral</span> effects.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Nelson, Deborah Shafer; McManus, John; Richmond, Robert H; King, David B; Gailani, Joe Z; Lackey, Tahirih C; Bryant, Duncan</p> <p>2016-03-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are in decline worldwide due to anthropogenic stressors including reductions in water and substratum quality. Dredging results in the mobilization of sediments, which can stress and kill <span class="hlt">corals</span> via increasing turbidity, tissue damage and burial. The Particle Tracking Model (PTM) was applied to predict the potential impacts of dredging-associated sediment exposure on the <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> of Apra Harbor, Guam. The data were interpreted using maps of bathymetry and <span class="hlt">coral</span> abundance and distribution in conjunction with impact parameters of suspended sediment concentration (turbidity) and sedimentation using defined <span class="hlt">coral</span> response thresholds. The results are presented using a "stoplight" model of negligible or limited impacts to <span class="hlt">coral</span> <span class="hlt">reefs</span> (green), moderate stress from which some <span class="hlt">corals</span> would be expected to recover while others would not (yellow) and severe stress resulting in mortality (red). The red conditions for sediment deposition rate and suspended sediment concentration (SSC) were defined as values exceeding 25 mg cm(-2) d(-1) over any 30 day window and >20 mg/l for any 18 days in any 90 day period over a column of water greater than 2 m, respectively. The yellow conditions were defined as values >10 mg cm(-2) d(-1) and <25 mg cm(-2) d(-1) over any 30 day period, and as 20% of 3 months' concentration exceeding 10 mg/l for the deposition and SSC, respectively. The model also incorporates the potential for cumulative effects on the assumption that even sub-lethal stress levels can ultimately lead to mortality in a multi-stressor system. This modeling approach can be applied by resource managers and regulatory agencies to support management decisions related to planning, site selection, damage reduction, and compensatory mitigation. Published by Elsevier Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2012BGD.....915501C','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2012BGD.....915501C"><span>Groundwater and porewater as a major source of alkalinity to a fringing <span class="hlt">coral</span> <span class="hlt">reef</span> lagoon (Muri Lagoon, Cook Islands)</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Cyronak, T.; Santos, I. R.; Erler, D. V.; Eyre, B. D.</p> <p>2012-11-01</p> <p>To better predict how ocean acidification will affect <span class="hlt">coral</span> <span class="hlt">reefs</span>, it is important to understand how biogeochemical cycles on <span class="hlt">reefs</span> alter carbonate chemistry over various temporal and spatial scales. This study quantifies the contribution of fresh groundwater discharge (as traced by radon) and shallow porewater exchange (as quantified from advective chamber incubations) to total alkalinity (TA) dynamics on a fringing <span class="hlt">coral</span> <span class="hlt">reef</span> lagoon along the southern Pacific island of Rarotonga over a tidal and diel cycle. Benthic alkalinity fluxes were affected by the advective circulation of water through permeable sediments, with net daily flux rates of carbonate alkalinity ranging from -1.55 to 7.76 mmol m-2 d-1, depending on the advection rate. Submarine groundwater discharge (SGD) was a source of TA to the lagoon, with the highest flux rates measured at low tide, and an average daily TA flux of 1080 mmol m-2 d-1. Both sources of TA were important on a <span class="hlt">reef</span> wide basis, although SGD acted solely as a delivery mechanism of TA to the lagoon, while porewater advection was either a sink or source of TA dependant on the time of day. On a daily basis, groundwater can contribute approximately 70% to 80% of the TA taken up by <span class="hlt">corals</span> within the lagoon. This study describes overlooked sources of TA to <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> that can potentially alter water-column carbonate chemistry. We suggest that porewater and groundwater fluxes of TA should be taken into account in ocean acidification models in order to properly address changing carbonate chemistry within <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/28944520','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/28944520"><span>Human activities as a driver of spatial variation in the trophic structure of fish communities on Pacific <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Ruppert, Jonathan L W; Vigliola, Laurent; Kulbicki, Michel; Labrosse, Pierre; Fortin, Marie-Josée; Meekan, Mark G</p> <p>2018-01-01</p> <p>Anthropogenic activities such as land-use change, pollution and fishing impact the trophic structure of <span class="hlt">coral</span> <span class="hlt">reef</span> fishes, which can influence <span class="hlt">ecosystem</span> health and function. Although these impacts may be ubiquitous, they are not consistent across the tropical Pacific Ocean. Using an extensive database of fish biomass sampled using underwater visual transects on <span class="hlt">coral</span> <span class="hlt">reefs</span>, we modelled the impact of human activities on food webs at Pacific-wide and regional (1,000s-10,000s km) scales. We found significantly lower biomass of sharks and carnivores, where there were higher densities of human populations (hereafter referred to as human activity); however, these patterns were not spatially consistent as there were significant differences in the trophic structures of fishes among biogeographic regions. Additionally, we found significant changes in the benthic structure of <span class="hlt">reef</span> environments, notably a decline in <span class="hlt">coral</span> cover where there was more human activity. Direct human impacts were the strongest in the upper part of the food web, where we found that in a majority of the Pacific, the biomass of <span class="hlt">reef</span> sharks and carnivores were significantly and negatively associated with human activity. Finally, although human-induced stressors varied in strength and significance throughout the <span class="hlt">coral</span> <span class="hlt">reef</span> food web across the Pacific, socioeconomic variables explained more variation in <span class="hlt">reef</span> fish trophic structure than habitat variables in a majority of the biogeographic regions. Notably, economic development (measured as GDP per capita) did not guarantee healthy <span class="hlt">reef</span> <span class="hlt">ecosystems</span> (high <span class="hlt">coral</span> cover and greater fish biomass). Our results indicate that human activities are significantly shaping patterns of trophic structure of <span class="hlt">reef</span> fishes in a spatially nonuniform manner across the Pacific Ocean, by altering processes that organize communities in both "top-down" (fishing of predators) and "bottom-up" (degradation of benthic communities) contexts. © 2017 John Wiley & Sons Ltd.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li class="active"><span>23</span></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_23 --> <div id="page_24" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li class="active"><span>24</span></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="461"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/17303183','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/17303183"><span>Is proximity to land-based sources of <span class="hlt">coral</span> stressors an appropriate measure of risk to <span class="hlt">coral</span> <span class="hlt">reefs</span>? An example from the Florida <span class="hlt">Reef</span> Tract.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lirman, Diego; Fong, Peggy</p> <p>2007-06-01</p> <p>Localized declines in <span class="hlt">coral</span> condition are commonly linked to land-based sources of stressors that influence gradients of water quality, and the distance to sources of stressors is commonly used as a proxy for predicting the vulnerability and future status of <span class="hlt">reef</span> resources. In this study, we evaluated explicitly whether proximity to shore and connections to coastal bays, two measures of potential land-based sources of disturbance, influence <span class="hlt">coral</span> community and population structure, and the abundance, distribution, and condition of <span class="hlt">corals</span> within patch <span class="hlt">reefs</span> of the Florida <span class="hlt">Reef</span> Tract. In the Florida Keys, long-term monitoring has documented significant differences in water quality along a cross-shelf gradient. Inshore habitats exhibit higher levels of nutrients (DIN and TP), TOC, turbidity, and light attenuation, and these levels decrease with increasing distance from shore and connections to tidal bays. In clear contrast to these patterns of water quality, <span class="hlt">corals</span> on inshore patch <span class="hlt">reefs</span> exhibited significantly higher <span class="hlt">coral</span> cover, higher growth rates, and lower partial mortality rates than those documented in similar offshore habitats. <span class="hlt">Coral</span> recruitment rates did not differ between inshore and offshore habitats. <span class="hlt">Corals</span> on patch <span class="hlt">reefs</span> closest to shore had well-spread population structures numerically dominated by intermediate to large colonies, while offshore populations showed narrower size-distributions that become increasingly positively skewed. Differences in size-structure of <span class="hlt">coral</span> populations were attributed to faster growth and lower rates of partial mortality at inshore habitats. While the underlying causes for the favorable condition of inshore <span class="hlt">coral</span> communities are not yet known, we hypothesize that the ability of <span class="hlt">corals</span> to shift their trophic mode under adverse environmental conditions may be partly responsible for the observed patterns, as shown in other <span class="hlt">reef</span> systems. This study, based on data collected from a uniform <span class="hlt">reef</span> habitat type and <span class="hlt">coral</span> species</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/1999ECSS...49...65A','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/1999ECSS...49...65A"><span>Human Impacts on <span class="hlt">Coral</span> <span class="hlt">Reefs</span> in the Sultanate of Oman</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Al-Jufaili, S.; Al-Jabri, M.; Al-Baluchi, A.; Baldwin, R. M.; Wilson, S. C.; West, F.; Matthews, A. D.</p> <p>1999-08-01</p> <p>A rapid assessment survey of the <span class="hlt">coral</span> <span class="hlt">reefs</span> of the Sultanate of Oman was conducted by the Ministry of Regional Municipalities and Environment during the first half of 1996. The survey revealed new information on the distribution pattern of <span class="hlt">corals</span> in Oman and identified impacts, threats and potential threats to <span class="hlt">coral</span> communities for the purpose of preparation of a National <span class="hlt">Coral</span> <span class="hlt">Reef</span> Management Plan (Phase One of the implementation of a National Coastal Zone Management Plan). Impacts on <span class="hlt">coral</span> <span class="hlt">reefs</span> in Oman were found to be attributable to both natural and human causes, resulting in significant and widespread degradation. Damage resulting from fisheries activities was the most commonly recorded human impact, with the most severe effects. Other human impacts resulted from coastal construction, recreational activities, oil pollution and eutrophication. Predation of <span class="hlt">corals</span> by Acanthaster planci, damage caused by storms, <span class="hlt">coral</span> diseases and temperature-related stress were the most commonly recorded natural impacts to <span class="hlt">coral</span> <span class="hlt">reefs</span>. Further minor natural impacts were attributable to siltation, rock falls and predation by a corallivorous gastropod (Drupella sp.). Significant differences between different areas of the country were found in terms of human impacts on <span class="hlt">coral</span> <span class="hlt">reefs</span> and these were related to coastal demography and human activity. Eighty per cent of sites studied were recorded to have been affected by human impacts to some degree. Impacts attributable to fisheries activities were found at 69% of the sites. Lost or abandoned gill nets were found to affect <span class="hlt">coral</span> <span class="hlt">reefs</span> at 49% of sites throughout Oman and accounted for 70% of all severe human impacts. Lost gill nets were also found to have a negative affect on fisheries resources and other marine wildlife. Observations of the behaviour of gill nets on <span class="hlt">coral</span> <span class="hlt">reefs</span> suggested a predictable pattern of damage over time and a significant increase in damage intensity during storms. Fishing nets were found to act selectively</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4452591','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4452591"><span>Suitable Environmental Ranges for Potential <span class="hlt">Coral</span> <span class="hlt">Reef</span> Habitats in the Tropical Ocean</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Guan, Yi; Hohn, Sönke; Merico, Agostino</p> <p>2015-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are found within a limited range of environmental conditions or tolerance limits. Estimating these limits is a critical prerequisite for understanding the impacts of climate change on the biogeography of <span class="hlt">coral</span> <span class="hlt">reefs</span>. Here we used the diagnostic model <span class="hlt">Reef</span>Hab to determine the current environmental tolerance limits for <span class="hlt">coral</span> <span class="hlt">reefs</span> and the global distribution of potential <span class="hlt">coral</span> <span class="hlt">reef</span> habitats as a function of six factors: temperature, salinity, nitrate, phosphate, aragonite saturation state, and light. To determine these tolerance limits, we extracted maximum and minimum values of all environmental variables in corresponding locations where <span class="hlt">coral</span> <span class="hlt">reefs</span> are present. We found that the global, annually averaged tolerance limits for <span class="hlt">coral</span> <span class="hlt">reefs</span> are 21.7—29.6 °C for temperature, 28.7—40.4 psu for salinity, 4.51 μmol L-1 for nitrate, 0.63 μmol L-1 for phosphate, and 2.82 for aragonite saturation state. The averaged minimum light intensity in <span class="hlt">coral</span> <span class="hlt">reefs</span> is 450 μmol photons m-2 s-1. The global area of potential <span class="hlt">reef</span> habitats calculated by the model is 330.5 × 103 km2. Compared with previous studies, the tolerance limits for temperature, salinity, and nutrients have not changed much, whereas the minimum value of aragonite saturation in <span class="hlt">coral</span> <span class="hlt">reef</span> waters has decreased from 3.28 to 2.82. The potential <span class="hlt">reef</span> habitat area calculated with <span class="hlt">Reef</span>Hab is about 121×103 km2 larger than the area estimated from the charted <span class="hlt">reefs</span>, suggesting that the growth potential of <span class="hlt">coral</span> <span class="hlt">reefs</span> is higher than currently observed. PMID:26030287</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26030287','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26030287"><span>Suitable environmental ranges for potential <span class="hlt">coral</span> <span class="hlt">reef</span> habitats in the tropical ocean.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Guan, Yi; Hohn, Sönke; Merico, Agostino</p> <p>2015-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are found within a limited range of environmental conditions or tolerance limits. Estimating these limits is a critical prerequisite for understanding the impacts of climate change on the biogeography of <span class="hlt">coral</span> <span class="hlt">reefs</span>. Here we used the diagnostic model <span class="hlt">Reef</span>Hab to determine the current environmental tolerance limits for <span class="hlt">coral</span> <span class="hlt">reefs</span> and the global distribution of potential <span class="hlt">coral</span> <span class="hlt">reef</span> habitats as a function of six factors: temperature, salinity, nitrate, phosphate, aragonite saturation state, and light. To determine these tolerance limits, we extracted maximum and minimum values of all environmental variables in corresponding locations where <span class="hlt">coral</span> <span class="hlt">reefs</span> are present. We found that the global, annually averaged tolerance limits for <span class="hlt">coral</span> <span class="hlt">reefs</span> are 21.7-29.6 °C for temperature, 28.7-40.4 psu for salinity, 4.51 μmol L-1 for nitrate, 0.63 μmol L-1 for phosphate, and 2.82 for aragonite saturation state. The averaged minimum light intensity in <span class="hlt">coral</span> <span class="hlt">reefs</span> is 450 μmol photons m-2 s-1. The global area of potential <span class="hlt">reef</span> habitats calculated by the model is 330.5 × 103 km2. Compared with previous studies, the tolerance limits for temperature, salinity, and nutrients have not changed much, whereas the minimum value of aragonite saturation in <span class="hlt">coral</span> <span class="hlt">reef</span> waters has decreased from 3.28 to 2.82. The potential <span class="hlt">reef</span> habitat area calculated with <span class="hlt">Reef</span>Hab is about 121×103 km2 larger than the area estimated from the charted <span class="hlt">reefs</span>, suggesting that the growth potential of <span class="hlt">coral</span> <span class="hlt">reefs</span> is higher than currently observed.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2018CorRe..37..215W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2018CorRe..37..215W"><span>Hypoxia tolerance in <span class="hlt">coral-reef</span> triggerfishes (Balistidae)</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wong, Corrie C.; Drazen, Jeffrey C.; Callan, Chatham K.; Korsmeyer, Keith E.</p> <p>2018-03-01</p> <p>Despite high rates of photosynthetic oxygen production during the day, the warm waters of <span class="hlt">coral</span> <span class="hlt">reefs</span> are susceptible to hypoxia at night due to elevated respiration rates at higher temperatures that also reduce the solubility of oxygen. Hypoxia may be a challenge for <span class="hlt">coral-reef</span> fish that hide in the <span class="hlt">reef</span> to avoid predators at night. Triggerfishes (Balistidae) are found in a variety of <span class="hlt">reef</span> habitats, but they also are known to find refuge in <span class="hlt">reef</span> crevices and holes at night, which may expose them to hypoxic conditions. The critical oxygen tension ( P crit) was determined as the point below which oxygen uptake could not be maintained to support standard metabolic rate (SMR) for five species of triggerfish. The triggerfishes exhibited similar levels of hypoxia tolerance as other <span class="hlt">coral-reef</span> and coastal marine fishes that encounter low oxygen levels in their environment. Two species, Rhinecanthus rectangulus and R. aculeatus, had the lowest P crit ( 3.0 kPa O2), comparable to the most hypoxia-tolerant obligate <span class="hlt">coral</span>-dwelling gobies, while Odonus niger and Sufflamen bursa were moderately tolerant to hypoxia ( P crit 4.5 kPa), and Xanthichthys auromarginatus was intermediate ( P crit 3.7 kPa). These differences in P crit were not due to differences in oxygen demand, as all the species had a similar SMR once mass differences were taken into account. The results suggest that triggerfish species are adapted for different levels of hypoxia exposure during nocturnal sheltering within the <span class="hlt">reef</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://hdl.handle.net/2060/20050238458','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/20050238458"><span>Decision Support Tool Evaluation Report for <span class="hlt">Coral</span> <span class="hlt">Reef</span> Early Warning System (CREWS) Version 7.0</span></a></p> <p><a target="_blank" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>D'Sa, Eurico; Hall, Callie; Zanoni, Vicki; Holland, Donald; Blonski, Slawomir; Pagnutti, Mary; Spruce, Joseph P.</p> <p>2004-01-01</p> <p>The <span class="hlt">Coral</span> <span class="hlt">Reef</span> Early Warning System (CREWS) is operated by NOAA's Office of Oceanic and Atmospheric Research as part of its <span class="hlt">Coral</span> <span class="hlt">Reef</span> Watch program in response to the deteriorating global state of <span class="hlt">coral</span> <span class="hlt">reef</span> and related benthic <span class="hlt">ecosystems</span>. In addition to sea surface temperatures (SSTs), the two most important parameters used by the CREWS network in generating <span class="hlt">coral</span> <span class="hlt">reef</span> bleaching alerts are 1) wind speed and direction and 2) photosynthetically available radiation (PAR). NASA remote sensing products that can enhance CREWS in these areas include SST and PAR products from the Moderate Resolution Imaging Spectroradiometer (MODIS) and wind data from the Quick Scatterometer (QuikSCAT). CREWS researchers are also interested in chlorophyll, chromophoric dissolved organic matter (CDOM), and salinity. Chlorophyll and CDOM are directly available as NASA products, while rainfall (an available NASA product) can be used as a proxy for salinity. Other potential NASA inputs include surface reflectance products from MODIS, the Advanced Spaceborne Thermal Emission and Reflection Radiometer, and Landsat. This report also identifies NASA-supported ocean circulation models and products from future satellite missions that might enchance the CREWS DST.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26535586','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26535586"><span>Conservation Planning for <span class="hlt">Coral</span> <span class="hlt">Reefs</span> Accounting for Climate Warming Disturbances.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Magris, Rafael A; Heron, Scott F; Pressey, Robert L</p> <p>2015-01-01</p> <p>Incorporating warming disturbances into the design of marine protected areas (MPAs) is fundamental to developing appropriate conservation actions that confer <span class="hlt">coral</span> <span class="hlt">reef</span> resilience. We propose an MPA design approach that includes spatially- and temporally-varying sea-surface temperature (SST) data, integrating both observed (1985-2009) and projected (2010-2099) time-series. We derived indices of acute (time under reduced <span class="hlt">ecosystem</span> function following short-term events) and chronic thermal stress (rate of warming) and combined them to delineate thermal-stress regimes. <span class="hlt">Coral</span> <span class="hlt">reefs</span> located on the Brazilian coast were used as a case study because they are considered a conservation priority in the southwestern Atlantic Ocean. We show that all <span class="hlt">coral</span> <span class="hlt">reef</span> areas in Brazil have experienced and are projected to continue to experience chronic warming, while acute events are expected to increase in frequency and intensity. We formulated quantitative conservation objectives for regimes of thermal stress. Based on these objectives, we then evaluated if/how they are achieved in existing Brazilian MPAs and identified priority areas where additional protection would reinforce resilience. Our results show that, although the current system of MPAs incorporates locations within some of our thermal-stress regimes, historical and future thermal refugia along the central coast are completely unprotected. Our approach is applicable to other marine <span class="hlt">ecosystems</span> and adds to previous marine planning for climate change in two ways: (i) by demonstrating how to spatially configure MPAs that meet conservation objectives for warming disturbance using spatially- and temporally-explicit data; and (ii) by strategically allocating different forms of spatial management (MPA types) intended to mitigate warming impacts and also enhance future resistance to climate warming.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4633137','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4633137"><span>Conservation Planning for <span class="hlt">Coral</span> <span class="hlt">Reefs</span> Accounting for Climate Warming Disturbances</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Magris, Rafael A.; Heron, Scott F.; Pressey, Robert L.</p> <p>2015-01-01</p> <p>Incorporating warming disturbances into the design of marine protected areas (MPAs) is fundamental to developing appropriate conservation actions that confer <span class="hlt">coral</span> <span class="hlt">reef</span> resilience. We propose an MPA design approach that includes spatially- and temporally-varying sea-surface temperature (SST) data, integrating both observed (1985–2009) and projected (2010–2099) time-series. We derived indices of acute (time under reduced <span class="hlt">ecosystem</span> function following short-term events) and chronic thermal stress (rate of warming) and combined them to delineate thermal-stress regimes. <span class="hlt">Coral</span> <span class="hlt">reefs</span> located on the Brazilian coast were used as a case study because they are considered a conservation priority in the southwestern Atlantic Ocean. We show that all <span class="hlt">coral</span> <span class="hlt">reef</span> areas in Brazil have experienced and are projected to continue to experience chronic warming, while acute events are expected to increase in frequency and intensity. We formulated quantitative conservation objectives for regimes of thermal stress. Based on these objectives, we then evaluated if/how they are achieved in existing Brazilian MPAs and identified priority areas where additional protection would reinforce resilience. Our results show that, although the current system of MPAs incorporates locations within some of our thermal-stress regimes, historical and future thermal refugia along the central coast are completely unprotected. Our approach is applicable to other marine <span class="hlt">ecosystems</span> and adds to previous marine planning for climate change in two ways: (i) by demonstrating how to spatially configure MPAs that meet conservation objectives for warming disturbance using spatially- and temporally-explicit data; and (ii) by strategically allocating different forms of spatial management (MPA types) intended to mitigate warming impacts and also enhance future resistance to climate warming. PMID:26535586</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4340798','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4340798"><span>Diverse Staghorn <span class="hlt">Coral</span> Fauna on the Mesophotic <span class="hlt">Reefs</span> of North-East Australia</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Muir, Paul; Wallace, Carden; Bridge, Tom C. L.; Bongaerts, Pim</p> <p>2015-01-01</p> <p>Concern for the future of <span class="hlt">reef</span>-building <span class="hlt">corals</span> in conditions of rising sea temperatures combined with recent technological advances has led to a renewed interest in documenting the biodiversity of mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> (MCEs) and their potential to provide lineage continuation for <span class="hlt">coral</span> taxa. Here, we examine species diversity of staghorn <span class="hlt">corals</span> (genera Acropora and Isopora) in the mesophotic zone (below 30 m depth) of the Great Barrier <span class="hlt">Reef</span> and western <span class="hlt">Coral</span> Sea. Using specimen-based records we found 38 staghorn species in the mesophotic zone, including three species newly recorded for Australia and five species that only occurred below 30 m. Staghorn <span class="hlt">corals</span> became scarce at depths below 50 m but were found growing in-situ to 73 m depth. Of the 76 staghorn <span class="hlt">coral</span> species recorded for shallow waters (depth ≤ 30 m) in north-east Australia, 21% extended to mesophotic depths with a further 22% recorded only rarely to 40 m depth. Extending into the mesophotic zone provided shallow water species no significant advantage in terms of their estimated global range-size relative to species restricted to shallow waters (means 86.2 X 106 km2 and 85.7 X 106 km2 respectively, p = 0.98). We found four staghorn <span class="hlt">coral</span> species at mesophotic depths on the Great Barrier <span class="hlt">Reef</span> that were previously considered rare and endangered on the basis of their limited distribution in central Indonesia and the far western Pacific. Colonies below 40 m depth showed laterally flattened branches, light and fragile skeletal structure and increased spacing between branches and corallites. The morphological changes are discussed in relation to decreased light, water movement and down-welling coarse sediments. Staghorn <span class="hlt">corals</span> have long been regarded as typical shallow-water genera, but here we demonstrate the significant contribution of this group to the region’s mesophotic fauna and the importance of considering MCEs in <span class="hlt">reef</span> biodiversity estimates and management. PMID:25714341</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25714341','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25714341"><span>Diverse staghorn <span class="hlt">coral</span> fauna on the mesophotic <span class="hlt">reefs</span> of north-east Australia.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Muir, Paul; Wallace, Carden; Bridge, Tom C L; Bongaerts, Pim</p> <p>2015-01-01</p> <p>Concern for the future of <span class="hlt">reef</span>-building <span class="hlt">corals</span> in conditions of rising sea temperatures combined with recent technological advances has led to a renewed interest in documenting the biodiversity of mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> (MCEs) and their potential to provide lineage continuation for <span class="hlt">coral</span> taxa. Here, we examine species diversity of staghorn <span class="hlt">corals</span> (genera Acropora and Isopora) in the mesophotic zone (below 30 m depth) of the Great Barrier <span class="hlt">Reef</span> and western <span class="hlt">Coral</span> Sea. Using specimen-based records we found 38 staghorn species in the mesophotic zone, including three species newly recorded for Australia and five species that only occurred below 30 m. Staghorn <span class="hlt">corals</span> became scarce at depths below 50 m but were found growing in-situ to 73 m depth. Of the 76 staghorn <span class="hlt">coral</span> species recorded for shallow waters (depth ≤ 30 m) in north-east Australia, 21% extended to mesophotic depths with a further 22% recorded only rarely to 40 m depth. Extending into the mesophotic zone provided shallow water species no significant advantage in terms of their estimated global range-size relative to species restricted to shallow waters (means 86.2 X 10(6) km2 and 85.7 X 10(6) km2 respectively, p = 0.98). We found four staghorn <span class="hlt">coral</span> species at mesophotic depths on the Great Barrier <span class="hlt">Reef</span> that were previously considered rare and endangered on the basis of their limited distribution in central Indonesia and the far western Pacific. Colonies below 40 m depth showed laterally flattened branches, light and fragile skeletal structure and increased spacing between branches and corallites. The morphological changes are discussed in relation to decreased light, water movement and down-welling coarse sediments. Staghorn <span class="hlt">corals</span> have long been regarded as typical shallow-water genera, but here we demonstrate the significant contribution of this group to the region's mesophotic fauna and the importance of considering MCEs in <span class="hlt">reef</span> biodiversity estimates and management.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70030391','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70030391"><span>Pulley <span class="hlt">reef</span>: a deep photosynthetic <span class="hlt">coral</span> <span class="hlt">reef</span> on the West Florida Shelf, USA</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Culter, J.K.; Ritchie, K.B.; Earle, S.A.; Guggenheim, D.E.; Halley, R.B.; Ciembronowicz, K.T.; Hine, A.C.; Jarrett, B.D.; Locker, S.D.; Jaap, W.C.</p> <p>2006-01-01</p> <p>Pulley <span class="hlt">Reef</span> (24°50′N, 83°40′W) lies on a submerged late Pleistocene shoreline feature that formed during a sea-level stillstand from 13.8 to 14.5 ka (Jarrett et al. 2005). The <span class="hlt">reef</span> is currently 60–75 m deep, exhibits 10–60% <span class="hlt">coral</span> cover, and extends over approximately 160 km2 of the sea floor. Zooxanthellate <span class="hlt">corals</span> are primarily Agaricia lamarcki, A. fragilis, Leptoseris cucullata, and less common Madracis formosa, M. pharensis, M. decactis, Montastraea cavernosa, Porites divaricata, Scolymia cubensis and Oculina tenella. Coralline algae are comparable in abundance to stony <span class="hlt">corals</span>. Other macroalgae include Halimeda tuna, Dictyota divaricata, Lobophora variegata, Ventricatri ventricosa, Verdigelas pelas, and Kallymenia sp. Anadyomene menziesii is abundant. The <span class="hlt">reef</span> provides a habitat for organisms typically observed at much shallower depths, and is the deepest known photosynthetic <span class="hlt">coral</span> <span class="hlt">reef</span> on the North America continental shelf (Fig. 1).</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2000EOSTr..81Q.626S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2000EOSTr..81Q.626S"><span>New protection initiatives announced for <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Showstack, Randy</p> <p></p> <p>Off the coasts of some of the South Pacific's most idyllic-sounding atolls, Austin Bowden-Kerby has seen first-hand the heavy damage to <span class="hlt">coral</span> <span class="hlt">reefs</span> from dynamite and cyanide fishing. For instance, while snorkeling near Chuuk, an island in Micronesia, he has observed craters and rubble beds of <span class="hlt">coral</span>, which locals have told him date to World War II ordnance.A marine biologist and project scientist for the <span class="hlt">Coral</span> Gardens Initiative of the Foundation for the Peoples of the South Pacific, Bowden-Kerby has also identified what he says are some public health effects related to destroyed <span class="hlt">coral</span> <span class="hlt">reefs</span> and their dying fisheries. These problems include protein and vitamin A deficiency and blindness, all of which may—in some instances—be linked to poor nutrition resulting from lower <span class="hlt">reef</span> fish consumption by islanders, according to Bowden-Kerby.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://hdl.handle.net/2060/20070031637','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/20070031637"><span>Simulated NASA Satellite Data Products for the NOAA Integrated <span class="hlt">Coral</span> <span class="hlt">Reef</span> Observation Network/<span class="hlt">Coral</span> <span class="hlt">Reef</span> Early Warning System</span></a></p> <p><a target="_blank" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Estep, Leland; Spruce, Joseph P.</p> <p>2007-01-01</p> <p>This RPC (Rapid Prototyping Capability) experiment will demonstrate the use of VIIRS (Visible/Infrared Imager/Radiometer Suite) and LDCM (Landsat Data Continuity Mission) sensor data as significant input to the NOAA (National Oceanic and Atmospheric Administration) ICON/ CREWS (Integrated <span class="hlt">Coral</span> <span class="hlt">Reef</span> Observation System/<span class="hlt">Coral</span> <span class="hlt">Reef</span> Early Warning System). The project affects the Coastal Management Program Element of the Applied Sciences Program.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/21985176','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/21985176"><span><span class="hlt">Coral</span> <span class="hlt">reefs</span> as drivers of cladogenesis: expanding <span class="hlt">coral</span> <span class="hlt">reefs</span>, cryptic extinction events, and the development of biodiversity hotspots.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Cowman, P F; Bellwood, D R</p> <p>2011-12-01</p> <p>Diversification rates within four conspicuous <span class="hlt">coral</span> <span class="hlt">reef</span> fish families (Labridae, Chaetodontidae, Pomacentridae and Apogonidae) were estimated using Bayesian inference. Lineage through time plots revealed a possible late Eocene/early Oligocene cryptic extinction event coinciding with the collapse of the ancestral Tethyan/Arabian hotspot. Rates of diversification analysis revealed elevated cladogenesis in all families in the Oligocene/Miocene. Throughout the Miocene, lineages with a high percentage of <span class="hlt">coral</span> <span class="hlt">reef</span>-associated taxa display significantly higher net diversification rates than expected. The development of a complex mosaic of <span class="hlt">reef</span> habitats in the Indo-Australian Archipelago (IAA) during the Oligocene/Miocene appears to have been a significant driver of cladogenesis. Patterns of diversification suggest that <span class="hlt">coral</span> <span class="hlt">reefs</span> acted as a refuge from high extinction, as <span class="hlt">reef</span> taxa are able to sustain diversification at high extinction rates. The IAA appears to support both cladogenesis and survival in associated lineages, laying the foundation for the recent IAA marine biodiversity hotspot. © 2011 The Authors. Journal of Evolutionary Biology © 2011 European Society For Evolutionary Biology.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4578945','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4578945"><span>Understanding the Spatio-Temporal Response of <span class="hlt">Coral</span> <span class="hlt">Reef</span> Fish Communities to Natural Disturbances: Insights from Beta-Diversity Decomposition</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Lamy, Thomas; Legendre, Pierre; Chancerelle, Yannick; Siu, Gilles; Claudet, Joachim</p> <p>2015-01-01</p> <p>Understanding how communities respond to natural disturbances is fundamental to assess the mechanisms of <span class="hlt">ecosystem</span> resistance and resilience. However, <span class="hlt">ecosystem</span> responses to natural disturbances are rarely monitored both through space and time, while the factors promoting <span class="hlt">ecosystem</span> stability act at various temporal and spatial scales. Hence, assessing both the spatial and temporal variations in species composition is important to comprehensively explore the effects of natural disturbances. Here, we suggest a framework to better scrutinize the mechanisms underlying community responses to disturbances through both time and space. Our analytical approach is based on beta diversity decomposition into two components, replacement and biomass difference. We illustrate this approach using a 9-year monitoring of <span class="hlt">coral</span> <span class="hlt">reef</span> fish communities off Moorea Island (French Polynesia), which encompassed two severe natural disturbances: a crown-of-thorns starfish outbreak and a hurricane. These disturbances triggered a fast logistic decline in <span class="hlt">coral</span> cover, which suffered a 90% decrease on all <span class="hlt">reefs</span>. However, we found that the <span class="hlt">coral</span> <span class="hlt">reef</span> fish composition remained largely stable through time and space whereas compensatory changes in biomass among species were responsible for most of the temporal fluctuations, as outlined by the overall high contribution of the replacement component to total beta diversity. This suggests that, despite the severity of the two disturbances, fish communities exhibited high resistance and the ability to reorganize their compositions to maintain the same level of total community biomass as before the disturbances. We further investigated the spatial congruence of this pattern and showed that temporal dynamics involved different species across sites; yet, herbivores controlling the proliferation of algae that compete with <span class="hlt">coral</span> communities were consistently favored. These results suggest that compensatory changes in biomass among species and spatial</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26393511','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26393511"><span>Understanding the Spatio-Temporal Response of <span class="hlt">Coral</span> <span class="hlt">Reef</span> Fish Communities to Natural Disturbances: Insights from Beta-Diversity Decomposition.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Lamy, Thomas; Legendre, Pierre; Chancerelle, Yannick; Siu, Gilles; Claudet, Joachim</p> <p>2015-01-01</p> <p>Understanding how communities respond to natural disturbances is fundamental to assess the mechanisms of <span class="hlt">ecosystem</span> resistance and resilience. However, <span class="hlt">ecosystem</span> responses to natural disturbances are rarely monitored both through space and time, while the factors promoting <span class="hlt">ecosystem</span> stability act at various temporal and spatial scales. Hence, assessing both the spatial and temporal variations in species composition is important to comprehensively explore the effects of natural disturbances. Here, we suggest a framework to better scrutinize the mechanisms underlying community responses to disturbances through both time and space. Our analytical approach is based on beta diversity decomposition into two components, replacement and biomass difference. We illustrate this approach using a 9-year monitoring of <span class="hlt">coral</span> <span class="hlt">reef</span> fish communities off Moorea Island (French Polynesia), which encompassed two severe natural disturbances: a crown-of-thorns starfish outbreak and a hurricane. These disturbances triggered a fast logistic decline in <span class="hlt">coral</span> cover, which suffered a 90% decrease on all <span class="hlt">reefs</span>. However, we found that the <span class="hlt">coral</span> <span class="hlt">reef</span> fish composition remained largely stable through time and space whereas compensatory changes in biomass among species were responsible for most of the temporal fluctuations, as outlined by the overall high contribution of the replacement component to total beta diversity. This suggests that, despite the severity of the two disturbances, fish communities exhibited high resistance and the ability to reorganize their compositions to maintain the same level of total community biomass as before the disturbances. We further investigated the spatial congruence of this pattern and showed that temporal dynamics involved different species across sites; yet, herbivores controlling the proliferation of algae that compete with <span class="hlt">coral</span> communities were consistently favored. These results suggest that compensatory changes in biomass among species and spatial</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSAH14A0014F','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSAH14A0014F"><span>Century-long acidification reveals possible consequences of <span class="hlt">coral</span> <span class="hlt">reef</span> sediment dissolution</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Fink, A.; Hassenrueck, C.; Guilini, K.; Lichtschlag, A.; Borisov, S.; Fabricius, K.; de Beer, D.</p> <p>2016-02-01</p> <p>Coarse permeable carbonate sediments play a key role as biocatalytical filters in element cycling on <span class="hlt">coral</span> <span class="hlt">reefs</span>, but are subjected to increased dissolution due to ocean acidification (OA). We investigated <span class="hlt">coral</span> <span class="hlt">reef</span> sediment properties and remineralization rates along a pH gradient in an area of volcanic CO2 seeping within a fringing <span class="hlt">coral</span> <span class="hlt">reef</span> (Papua New Guinea). In coarse carbonate-rich sediments of the reference site (water column pHT = 8.1) in-situ microprofiles showed a buffered porewater pH of 7.7 to 7.9. In contrast, sites with diffuse CO2 seeping (water column pHT 8.0 to 7.7) experienced porewater pH of less than 6 to 7. At the seep sites, the sediments were almost free of carbonates and were dominated by silicates. We found that this resulted in reduced grain sizes leading to decreased permeability and oxygen penetration into the sediment. Areal oxygen consumption and sulfate reduction rates declined at the seep sites. The pattern in oxygen consumption could be explained by oxygen limitation due to lower permeability. However, sulfate reduction was never limited by electron acceptor, indicating that the seep site sediments were limited in electron donors. In line with lower process rates, abundances of microorganisms and meiofauna declined at the seep sites. Our findings suggest that an enhanced dissolution of carbonate sediments due to OA could impact their biocatalytical filtration function. This could slow down the intense element cycling in <span class="hlt">coral</span> <span class="hlt">reefs</span> and other coastal carbonate environments, with consequences for <span class="hlt">ecosystem</span> productivity and functioning.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2001EOSTr..82....1W','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2001EOSTr..82....1W"><span>Crisis on <span class="hlt">coral</span> <span class="hlt">reefs</span> linked to climate change</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Wellington, Gerard M.; Glynn, Peter W.; Strong, Alan E.; Navarrete, Sergio A.; Wieters, Evie; Hubbard, Dennis</p> <p>2001-01-01</p> <p>Since 1982, <span class="hlt">coral</span> <span class="hlt">reefs</span> worldwide have been subjected to an increased frequency of the phenomenon known as <span class="hlt">coral</span> bleaching. Bleaching involves the dramatic loss of pigmented, single-celled endosymbiotic algae that live within the gastrodermal cells of a <span class="hlt">coral</span> host that depends on this relationship for survival. Prior to the 1980s, and as early as the 1920s when <span class="hlt">coral</span> <span class="hlt">reef</span> research intensified, localized bleaching events were reported and attributed to factors such as extremely low tides, hurricane damage, torrential rainstorms, freshwater runoff near <span class="hlt">reefs</span>, or toxic algal blooms [Glynn, 1993]. However, these early occurrences have recently been overshadowed by geographically larger and more frequent bleaching events whose impact has expanded to regional and global proportions.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4382026','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=4382026"><span>Human, Oceanographic and Habitat Drivers of Central and Western Pacific <span class="hlt">Coral</span> <span class="hlt">Reef</span> Fish Assemblages</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Williams, Ivor D.; Baum, Julia K.; Heenan, Adel; Hanson, Katharine M.; Nadon, Marc O.; Brainard, Russell E.</p> <p>2015-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> around US- and US-affiliated Pacific islands and atolls span wide oceanographic gradients and levels of human impact. Here we examine the relative influence of these factors on <span class="hlt">coral</span> <span class="hlt">reef</span> fish biomass, using data from a consistent large-scale <span class="hlt">ecosystem</span> monitoring program conducted by scientific divers over the course of >2,000 hours of underwater observation at 1,934 sites, across ~40 islands and atolls. Consistent with previous smaller-scale studies, our results show sharp declines in <span class="hlt">reef</span> fish biomass at relatively low human population density, followed by more gradual declines as human population density increased further. Adjusting for other factors, the highest levels of oceanic productivity among our study locations were associated with more than double the biomass of <span class="hlt">reef</span> fishes (including ~4 times the biomass of planktivores and piscivores) compared to islands with lowest oceanic productivity. Our results emphasize that <span class="hlt">coral</span> <span class="hlt">reef</span> areas do not all have equal ability to sustain large <span class="hlt">reef</span> fish stocks, and that what is natural varies significantly amongst locations. Comparisons of biomass estimates derived from visual surveys with predicted biomass in the absence of humans indicated that total <span class="hlt">reef</span> fish biomass was depleted by 61% to 69% at populated islands in the Mariana Archipelago; by 20% to 78% in the Main Hawaiian islands; and by 21% to 56% in American Samoa. PMID:25831196</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29736999','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29736999"><span>The hidden half: ecology and evolution of cryptobenthic fishes on <span class="hlt">coral</span> <span class="hlt">reefs</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Brandl, Simon J; Goatley, Christopher H R; Bellwood, David R; Tornabene, Luke</p> <p>2018-05-07</p> <p>, survive and reproduce; we identify a range of life-history adaptations that have enabled CRFs to overcome these limitations. In turn, these adaptations bestow a unique socio-ecological role on CRFs, which includes a key role in <span class="hlt">coral</span> <span class="hlt">reef</span> trophodynamics by cycling trophic energy provided by microscopic prey to larger consumers. Although small in body size, the ecology and evolutionary history of CRFs may make them a critical component of <span class="hlt">coral-reef</span> food webs; yet our review also shows that these fishes are highly susceptible to a variety of anthropogenic disturbances. Understanding the consequences of these changes for CRFs and <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> will require us to shed more light on this frequently overlooked but highly diverse and abundant guild of <span class="hlt">coral</span> <span class="hlt">reef</span> fishes. © 2018 Cambridge Philosophical Society.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li class="active"><span>24</span></li> <li><a href="#" onclick='return showDiv("page_25");'>25</a></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_24 --> <div id="page_25" class="hiddenDiv"> <div class="row"> <div class="col-sm-12"> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li class="active"><span>25</span></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div> </div> <div class="row"> <div class="col-sm-12"> <ol class="result-class" start="481"> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70032122','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70032122"><span>Characterising <span class="hlt">reef</span> fish populations and habitats within and outside the US Virgin Islands <span class="hlt">Coral</span> <span class="hlt">Reef</span> National Monument: A lesson in marine protected area design</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Monaco, Mark E.; Friedlander, A.M.; Caldow, Chris; Christensen, J.D.; Rogers, C.; Beets, J.; Miller, J.; Boulon, Rafe</p> <p>2007-01-01</p> <p>Marine protected areas are an important tool for management of marine <span class="hlt">ecosystems</span>. Despite their utility, ecological design criteria are often not considered or feasible to implement when establishing protected areas. In 2001, the Virgin Islands <span class="hlt">Coral</span> <span class="hlt">Reef</span> National Monument (VICRNM) in St John, US Virgin Islands was established by Executive Order. The VICRNM prohibits almost all extractive uses. Surveys of habitat and fishes inside and outside of the VICRNM were conducted in 2002-2004. Areas outside the VICRNM had significantly more hard <span class="hlt">corals</span>, greater habitat complexity, and greater richness, abundance and biomass of <span class="hlt">reef</span> fishes than areas within the VICRNM. The administrative process used to delineate the boundaries of the VICRNM did not include a robust ecological characterisation of the area. Because of reduced habitat complexity within the VICRNM, the enhancement of the marine <span class="hlt">ecosystem</span> may not be fully realised or increases in economically important <span class="hlt">reef</span> fishes may take longer to detect. ?? 2007 The Authors. Journal compilation ?? 2007 Blackwell Publishing Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/25611594','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/25611594"><span>Forecasted <span class="hlt">coral</span> <span class="hlt">reef</span> decline in marine biodiversity hotspots under climate change.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Descombes, Patrice; Wisz, Mary S; Leprieur, Fabien; Parravicini, Valerianio; Heine, Christian; Olsen, Steffen M; Swingedouw, Didier; Kulbicki, Michel; Mouillot, David; Pellissier, Loïc</p> <p>2015-01-21</p> <p><span class="hlt">Coral</span> bleaching events threaten <span class="hlt">coral</span> <span class="hlt">reef</span> habitats globally and cause severe declines of local biodiversity and productivity. Related to high sea surface temperatures (SST), bleaching events are expected to increase as a consequence of future global warming. However, response to climate change is still uncertain as future low-latitude climatic conditions have no present-day analogue. Sea surface temperatures during the Eocene epoch were warmer than forecasted changes for the coming century, and distributions of <span class="hlt">corals</span> during the Eocene may help to inform models forecasting the future of <span class="hlt">coral</span> <span class="hlt">reefs</span>. We coupled contemporary and Eocene <span class="hlt">coral</span> occurrences with information on their respective climatic conditions to model the thermal niche of <span class="hlt">coral</span> <span class="hlt">reefs</span> and its potential response to projected climate change. We found that under the RCP8.5 climate change scenario, the global suitability for <span class="hlt">coral</span> <span class="hlt">reefs</span> may increase up to 16% by 2100, mostly due to improved suitability of higher latitudes. In contrast, in its current range, <span class="hlt">coral</span> <span class="hlt">reef</span> suitability may decrease up to 46% by 2100. Reduction in thermal suitability will be most severe in biodiversity hotspots, especially in the Indo-Australian Archipelago. Our results suggest that many contemporary hotspots for <span class="hlt">coral</span> <span class="hlt">reefs</span>, including those that have been refugia in the past, spatially mismatch with future suitable areas for <span class="hlt">coral</span> <span class="hlt">reefs</span> posing challenges to conservation actions under climate change. © 2015 John Wiley & Sons Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3832406','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3832406"><span>Modelling <span class="hlt">Coral</span> <span class="hlt">Reef</span> Futures to Inform Management: Can Reducing Local-Scale Stressors Conserve <span class="hlt">Reefs</span> under Climate Change?</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Gurney, Georgina G.; Melbourne-Thomas, Jessica; Geronimo, Rollan C.; Aliño, Perry M.; Johnson, Craig R.</p> <p>2013-01-01</p> <p>Climate change has emerged as a principal threat to <span class="hlt">coral</span> <span class="hlt">reefs</span>, and is expected to exacerbate <span class="hlt">coral</span> <span class="hlt">reef</span> degradation caused by more localised stressors. Management of local stressors is widely advocated to bolster <span class="hlt">coral</span> <span class="hlt">reef</span> resilience, but the extent to which management of local stressors might affect future trajectories of <span class="hlt">reef</span> state remains unclear. This is in part because of limited understanding of the cumulative impact of multiple stressors. Models are ideal tools to aid understanding of future <span class="hlt">reef</span> state under alternative management and climatic scenarios, but to date few have been sufficiently developed to be useful as decision support tools for local management of <span class="hlt">coral</span> <span class="hlt">reefs</span> subject to multiple stressors. We used a simulation model of <span class="hlt">coral</span> <span class="hlt">reefs</span> to investigate the extent to which the management of local stressors (namely poor water quality and fishing) might influence future <span class="hlt">reef</span> state under varying climatic scenarios relating to <span class="hlt">coral</span> bleaching. We parameterised the model for Bolinao, the Philippines, and explored how simulation modelling can be used to provide decision support for local management. We found that management of water quality, and to a lesser extent fishing, can have a significant impact on future <span class="hlt">reef</span> state, including <span class="hlt">coral</span> recovery following bleaching-induced mortality. The stressors we examined interacted antagonistically to affect <span class="hlt">reef</span> state, highlighting the importance of considering the combined impact of multiple stressors rather than considering them individually. Further, by providing explicit guidance for management of Bolinao's <span class="hlt">reef</span> system, such as which course of management action will most likely to be effective over what time scales and at which sites, we demonstrated the utility of simulation models for supporting management. Aside from providing explicit guidance for management of Bolinao's <span class="hlt">reef</span> system, our study offers insights which could inform <span class="hlt">reef</span> management more broadly, as well as general understanding of <span class="hlt">reef</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/24260347','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/24260347"><span>Modelling <span class="hlt">coral</span> <span class="hlt">reef</span> futures to inform management: can reducing local-scale stressors conserve <span class="hlt">reefs</span> under climate change?</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Gurney, Georgina G; Melbourne-Thomas, Jessica; Geronimo, Rollan C; Aliño, Perry M; Johnson, Craig R</p> <p>2013-01-01</p> <p>Climate change has emerged as a principal threat to <span class="hlt">coral</span> <span class="hlt">reefs</span>, and is expected to exacerbate <span class="hlt">coral</span> <span class="hlt">reef</span> degradation caused by more localised stressors. Management of local stressors is widely advocated to bolster <span class="hlt">coral</span> <span class="hlt">reef</span> resilience, but the extent to which management of local stressors might affect future trajectories of <span class="hlt">reef</span> state remains unclear. This is in part because of limited understanding of the cumulative impact of multiple stressors. Models are ideal tools to aid understanding of future <span class="hlt">reef</span> state under alternative management and climatic scenarios, but to date few have been sufficiently developed to be useful as decision support tools for local management of <span class="hlt">coral</span> <span class="hlt">reefs</span> subject to multiple stressors. We used a simulation model of <span class="hlt">coral</span> <span class="hlt">reefs</span> to investigate the extent to which the management of local stressors (namely poor water quality and fishing) might influence future <span class="hlt">reef</span> state under varying climatic scenarios relating to <span class="hlt">coral</span> bleaching. We parameterised the model for Bolinao, the Philippines, and explored how simulation modelling can be used to provide decision support for local management. We found that management of water quality, and to a lesser extent fishing, can have a significant impact on future <span class="hlt">reef</span> state, including <span class="hlt">coral</span> recovery following bleaching-induced mortality. The stressors we examined interacted antagonistically to affect <span class="hlt">reef</span> state, highlighting the importance of considering the combined impact of multiple stressors rather than considering them individually. Further, by providing explicit guidance for management of Bolinao's <span class="hlt">reef</span> system, such as which course of management action will most likely to be effective over what time scales and at which sites, we demonstrated the utility of simulation models for supporting management. Aside from providing explicit guidance for management of Bolinao's <span class="hlt">reef</span> system, our study offers insights which could inform <span class="hlt">reef</span> management more broadly, as well as general understanding of <span class="hlt">reef</span></p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29161314','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29161314"><span>Conventional and technical diving surveys reveal elevated biomass and differing fish community composition from shallow and upper mesophotic zones of a remote United States <span class="hlt">coral</span> <span class="hlt">reef</span>.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Muñoz, Roldan C; Buckel, Christine A; Whitfield, Paula E; Viehman, Shay; Clark, Randy; Taylor, J Christopher; Degan, Brian P; Hickerson, Emma L</p> <p>2017-01-01</p> <p>The world's <span class="hlt">coral</span> <span class="hlt">reefs</span> appear to be in a global decline, yet most previous research on <span class="hlt">coral</span> <span class="hlt">reefs</span> has taken place at depths shallower than 30 m. Mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystem</span> (depths deeper than ~30 m) studies have revealed extensive, productive habitats and rich communities. Despite recent advances, mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> remain understudied due to challenges with sampling at deeper depths. The few previous studies of mesophotic <span class="hlt">coral</span> <span class="hlt">ecosystems</span> have shown variation across locations in depth-specific species composition and assemblage shifts, potentially a response to differences in habitat or light availability/water clarity. This study utilized scuba to examine fish and benthic communities from shallow and upper mesophotic (to 45 m) zones of Flower Garden Banks National Marine Sanctuary (FGBNMS, 28°0'N; 93°50'W) from 2010-2012. Dominant planktivores were ubiquitous in shallow and upper mesophotic habitats, and comparisons with previous shallow research suggest this community distribution has persisted for over 30 years. Planktivores were abundant in shallow low-relief habitats on the periphery of the <span class="hlt">coral</span> <span class="hlt">reef</span>, and some of these sites that contained habitat transitioning from high to low relief supported high biomass of benthic predators. These peripheral sites at FGBNMS may be important for the trophic transfer of oceanic energy to the benthic <span class="hlt">coral</span> <span class="hlt">reef</span>. Distinct differences between upper mesophotic and shallow communities were also observed. These included greater overall fish (as well as apex predator) biomass in the upper mesophotic, differences in apex predator community composition between depth zones, and greater percent cover of algae, rubble, sand, and sponges in the upper mesophotic. Greater fish biomass in the upper mesophotic and similar fish community composition between depth zones provide preliminary support that upper mesophotic habitats at FGBNMS have the capacity to serve as refugia for the shallow-water <span class="hlt">reefs</span>. Diving surveys of the</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3153452','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=3153452"><span>Population Genetics of an <span class="hlt">Ecosystem</span>-Defining <span class="hlt">Reef</span> <span class="hlt">Coral</span> Pocillopora damicornis in the Tropical Eastern Pacific</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Combosch, David J.; Vollmer, Steven V.</p> <p>2011-01-01</p> <p>Background <span class="hlt">Coral</span> <span class="hlt">reefs</span> in the Tropical Eastern Pacific (TEP) are amongst the most peripheral and geographically isolated in the world. This isolation has shaped the biology of TEP organisms and lead to the formation of numerous endemic species. For example, the <span class="hlt">coral</span> Pocillopora damicornis is a minor <span class="hlt">reef</span>-builder elsewhere in the Indo-West Pacific, but is the dominant <span class="hlt">reef</span>-building <span class="hlt">coral</span> in the TEP, where it forms large, mono-specific stands, covering many hectares of <span class="hlt">reef</span>. Moreover, TEP P. damicornis reproduces by broadcast spawning, while it broods mostly parthenogenetic larvae throughout the rest of the Indo-West Pacific. Population genetic surveys for P. damicornis from across its Indo-Pacific range indicate that gene flow (i.e. larval dispersal) is generally limited over hundreds of kilometers or less. Little is known about the population genetic structure and the dispersal potential of P. damicornis in the TEP. Methodology Using multilocus microsatellite data, we analyzed the population structure of TEP P. damicornis among and within nine <span class="hlt">reefs</span> and test for significant genetic structure across three geographically and ecologically distinct regions in Panama. Principal Findings/Conclusions We detected significant levels of population genetic structure (global RST = 0.162), indicating restricted gene flow (i.e. larvae dispersal), both among the three regions (RRT = 0.081) as well as within regions (RSR = 0.089). Limited gene flow across a distinct environmental cline, like the regional upwelling gradient in Panama, indicates a significant potential for differential adaptation and population differentiation. Individual <span class="hlt">reefs</span> were characterized by unexpectedly high genet diversity (avg. 94%), relatively high inbreeding coefficients (global FIS = 0.183), and localized spatial genetic structure among individuals (i.e. unique genets) over 10 m intervals. These findings suggest that gene flow is limited in TEP P. damicornis populations, particularly</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSCT24B0163P','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSCT24B0163P"><span>Organic Carbon Sources and their Transfer in a Gulf of Mexico <span class="hlt">Coral</span> <span class="hlt">Reef</span> <span class="hlt">Ecosystem</span> under River Influence</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Parrish, C.; Carreón-Palau, L.; del Ángel-Rodríguez, J.; Perez-Espana, H.; Aguiniga-Garcıa, S.</p> <p>2016-02-01</p> <p>To assess the degree to which <span class="hlt">coral</span> <span class="hlt">reefs</span> in a marine protected area have been influenced by terrestrial and anthropogenic organic carbon inputs we used C and N stable isotopes and lipid biomarkers in the <span class="hlt">Coral</span> <span class="hlt">Reef</span> System of Veracruz in the southwest Gulf of Mexico. A C and N stable isotope mixing model and a calculated fatty acid (FA) retention factor revealed the primary producer sources that fuel the <span class="hlt">coral</span> <span class="hlt">reef</span> food web. Then lipid classes, FA and sterol biomarkers determined production of terrestrial and marine biogenic material of nutritional quality to pelagic and benthic organisms. Finally, coprostanol determined pollutant loading from sewage in the suspended particulate matter. Results indicate that phytoplankton is the major source of essential FA for fish and that dietary energy from terrestrial sources such as mangroves are transferred to juvenile fish, while sea grass non-essential FA are transferred to the entire food web. Sea urchins may be the main consumers of brown macroalgae, while surgeon fish prefer red algae. C and N isotopic values and the C:N ratio suggest that fertilizer is the principal source of nitrogen to macroalgae. Thus nitrogen supply also favored phytoplankton and sea grass growth leading to a better nutritional condition and high retention of organic carbon in the food web members during the rainy season when river influence increases. However, the great star <span class="hlt">coral</span> Montastrea cavernosa nutritional condition decreased significantly. The nearest river to the <span class="hlt">Reef</span> System was polluted in the dry season; however, a dilution effect was detected in the rainy season, when some <span class="hlt">coral</span> <span class="hlt">reefs</span> were contaminated. In 2013, a new treatment plant started working in the area. We would suggest monitoring δ15N and the C: N ratio in macroalgae as indicators of the nitrogen input and coprostanol as an indicator of human feces pollution in order to verify the efficiency of the new treatment plant as part of the management program of the <span class="hlt">Reef</span> System.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://pubs.er.usgs.gov/publication/70000220','USGSPUBS'); return false;" href="https://pubs.er.usgs.gov/publication/70000220"><span>Phase shift from a <span class="hlt">coral</span> to a corallimorph-dominated <span class="hlt">reef</span> associated with a shipwreck on Palmyra atoll</span></a></p> <p><a target="_blank" href="http://pubs.er.usgs.gov/pubs/index.jsp?view=adv">USGS Publications Warehouse</a></p> <p>Work, Thierry M.; Aeby, G.S.; Maragos, J.E.</p> <p>2008-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> can undergo relatively rapid changes in the dominant biota, a phenomenon referred to as phase shift. Various reasons have been proposed to explain this phenomenon including increased human disturbance, pollution, or changes in <span class="hlt">coral</span> <span class="hlt">reef</span> biota that serve a major ecological function such as depletion of grazers. However, pinpointing the actual factors potentially responsible can be problematic. Here we show a phase shift from <span class="hlt">coral</span> to the corallimorpharian Rhodactis howesii associated with a long line vessel that wrecked in 1991 on an isolated atoll (Palmyra) in the central Pacific Ocean. We documented high densities of R. howesii near the ship that progressively decreased with distance from the ship whereas R. howesii were rare to absent in other parts of the atoll. We also confirmed high densities of R. howesii around several buoys recently installed on the atoll in 2001. This is the first time that a phase shift on a <span class="hlt">coral</span> leef has been unambiguously associated with man-made structures. This association was made, in part, because of the remoteness of Palmyra and its recent history of minimal human habitation or impact. Phase shifts can have long-term negative ramification for <span class="hlt">coral</span> <span class="hlt">reefs</span>, and eradication of organisms responsible for phase shifts in marine <span class="hlt">ecosystems</span> can be difficult, particularly if such organisms cover a large area. The extensive R. howesii invasion and subsequent loss of <span class="hlt">coral</span> <span class="hlt">reef</span> habitat at Palmyra also highlights the importance of rapid removal of shipwrecks on <span class="hlt">corals</span> <span class="hlt">reefs</span> to mitigate the potential of <span class="hlt">reef</span> overgrowth by invasives.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23056635','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23056635"><span>Predator crown-of-thorns starfish (Acanthaster planci) outbreak, mass mortality of <span class="hlt">corals</span>, and cascading effects on <span class="hlt">reef</span> fish and benthic communities.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Kayal, Mohsen; Vercelloni, Julie; Lison de Loma, Thierry; Bosserelle, Pauline; Chancerelle, Yannick; Geoffroy, Sylvie; Stievenart, Céline; Michonneau, François; Penin, Lucie; Planes, Serge; Adjeroud, Mehdi</p> <p>2012-01-01</p> <p>Outbreaks of the <span class="hlt">coral</span>-killing seastar Acanthaster planci are intense disturbances that can decimate <span class="hlt">coral</span> <span class="hlt">reefs</span>. These events consist of the emergence of large swarms of the predatory seastar that feed on <span class="hlt">reef</span>-building <span class="hlt">corals</span>, often leading to widespread devastation of <span class="hlt">coral</span> populations. While cyclic occurrences of such outbreaks are reported from many tropical <span class="hlt">reefs</span> throughout the Indo-Pacific, their causes are hotly debated, and the spatio-temporal dynamics of the outbreaks and impacts to <span class="hlt">reef</span> communities remain unclear. Based on observations of a recent event around the island of Moorea, French Polynesia, we show that Acanthaster outbreaks are methodic, slow-paced, and diffusive biological disturbances. Acanthaster outbreaks on insular <span class="hlt">reef</span> systems like Moorea's appear to originate from restricted areas confined to the ocean-exposed base of <span class="hlt">reefs</span>. Elevated Acanthaster densities then progressively spread to adjacent and shallower locations by migrations of seastars in aggregative waves that eventually affect the entire <span class="hlt">reef</span> system. The directional migration across <span class="hlt">reefs</span> appears to be a search for prey as <span class="hlt">reef</span> portions affected by dense seastar aggregations are rapidly depleted of living <span class="hlt">corals</span> and subsequently left behind. <span class="hlt">Coral</span> decline on impacted <span class="hlt">reefs</span> occurs by the sequential consumption of species in the order of Acanthaster feeding preferences. Acanthaster outbreaks thus result in predictable alteration of the <span class="hlt">coral</span> community structure. The outbreak we report here is among the most intense and devastating ever reported. Using a hierarchical, multi-scale approach, we also show how sessile benthic communities and resident <span class="hlt">coral</span>-feeding fish assemblages were subsequently affected by the decline of <span class="hlt">corals</span>. By elucidating the processes involved in an Acanthaster outbreak, our study contributes to comprehending this widespread disturbance and should thus benefit targeted management actions for <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span>.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2016AGUOSME54B0927G','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2016AGUOSME54B0927G"><span>Monitoring Land Based Sources of Pollution over <span class="hlt">Coral</span> <span class="hlt">Reefs</span> using VIIRS Ocean Color Products</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Geiger, E.; Strong, A. E.; Eakin, C. M.; Wang, M.; Hernandez, W. J.; Cardona Maldonado, M. A.; De La Cour, J. L.; Liu, G.; Tirak, K.; Heron, S. F.; Skirving, W. J.; Armstrong, R.; Warner, R. A.</p> <p>2016-02-01</p> <p>NOAA's <span class="hlt">Coral</span> <span class="hlt">Reef</span> Watch (CRW) program and the NESDIS Ocean Color Team are developing new products to monitor land based sources of pollution (LBSP) over <span class="hlt">coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> using the Visible Infrared Imaging Radiometer Suite (VIIRS) onboard the S-NPP satellite. LBSP are a major threat to <span class="hlt">corals</span> that can cause disease and mortality, disrupt critical ecological <span class="hlt">reef</span> functions, and impede growth, reproduction, and larval settlement, among other impacts. From VIIRS, near-real-time satellite products of Chlorophyll-a, Kd(490), and sea surface temperature are being developed for three U.S. <span class="hlt">Coral</span> <span class="hlt">Reef</span> Task Force priority watershed sites - Ka'anapali (West Maui, Hawai'i), Faga'alu (American Samoa), and Guánica Bay (Puerto Rico). Background climatological levels of these parameters are being developed to construct anomaly products. Time-series data are being generated to monitor changes in water quality in near-real-time and provide information on historical variations, especially following significant rain events. A pilot calibration/validation field study of the VIIRS-based ocean color products is underway in Puerto Rico; we plan to expand this validation effort to the other two watersheds. Working with local resource managers, we have identified a focal area for product development and validation for each watershed and its associated local <span class="hlt">reefs</span>. This poster will present preliminary results and identify a path forward to ensure marine resource managers understand and correctly use the new ocean color products, and to help NOAA CRW refine its satellite products to maximize their benefit to <span class="hlt">coral</span> <span class="hlt">reef</span> management. NOAA - National Oceanic and Atmospheric Administration NESDIS - NOAA/National Environmental Satellite, Data, and Information Service S-NPP - Suomi National Polar-orbiting Partnership</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://adsabs.harvard.edu/abs/2015OSJ....50..343S','NASAADS'); return false;" href="http://adsabs.harvard.edu/abs/2015OSJ....50..343S"><span>Introduction of geospatial perspective to the ecology of fish-habitat relationships in Indonesian <span class="hlt">coral</span> <span class="hlt">reefs</span>: A remote sensing approach</span></a></p> <p><a target="_blank" href="http://adsabs.harvard.edu/abstract_service.html">NASA Astrophysics Data System (ADS)</a></p> <p>Sawayama, Shuhei; Nurdin, Nurjannah; Akbar AS, Muhammad; Sakamoto, Shingo X.; Komatsu, Teruhisa</p> <p>2015-06-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reef</span> <span class="hlt">ecosystems</span> worldwide are now being harmed by various stresses accompanying the degradation of fish habitats and thus knowledge of fish-habitat relationships is urgently required. Because conventional research methods were not practical for this purpose due to the lack of a geospatial perspective, we attempted to develop a research method integrating visual fish observation with a seabed habitat map and to expand knowledge to a two-dimensional scale. WorldView-2 satellite imagery of Spermonde Archipelago, Indonesia obtained in September 2012 was analyzed and classified into four typical substrates: live <span class="hlt">coral</span>, dead <span class="hlt">coral</span>, seagrass and sand. Overall classification accuracy of this map was 81.3% and considered precise enough for subsequent analyses. Three sub-areas (CC: continuous <span class="hlt">coral</span> <span class="hlt">reef</span>, BC: boundary of <span class="hlt">coral</span> <span class="hlt">reef</span> and FC: few live <span class="hlt">coral</span> zone) around <span class="hlt">reef</span> slopes were extracted from the map. Visual transect surveys for several fish species were conducted within each sub-area in June 2013. As a result, Mean density (Ind. / 300 m2) of Chaetodon octofasciatus, known as an obligate feeder of <span class="hlt">corals</span>, was significantly higher at BC than at the others (p < 0.05), implying that this species' density is strongly influenced by spatial configuration of its habitat, like the "edge effect." This indicates that future conservation procedures for <span class="hlt">coral</span> <span class="hlt">reef</span> fishes should consider not only <span class="hlt">coral</span> cover but also its spatial configuration. The present study also indicates that the introduction of a geospatial perspective derived from remote sensing has great potential to progress conventional ecological studies on <span class="hlt">coral</span> <span class="hlt">reef</span> fishes.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=190469&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=190469&Lab=NHEERL&keyword=physical+AND+activity&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Evaluation of Stony <span class="hlt">Coral</span> Indicators for <span class="hlt">Coral</span> <span class="hlt">Reef</span> Management.</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Colonies of <span class="hlt">reef</span>-building stony <span class="hlt">corals</span> at 57 stations around St. Croix, U.S. Virgin Islands were characterized by species, size and percentage of living tissue. Taxonomic, biological and physical indicators of <span class="hlt">coral</span> condition were derived from these measurements and assessed for ...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=253285&keyword=stress+AND+management&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50','EPA-EIMS'); return false;" href="https://cfpub.epa.gov/si/si_public_record_report.cfm?dirEntryId=253285&keyword=stress+AND+management&actType=&TIMSType=+&TIMSSubTypeID=&DEID=&epaNumber=&ntisID=&archiveStatus=Both&ombCat=Any&dateBeginCreated=&dateEndCreated=&dateBeginPublishedPresented=&dateEndPublishedPresented=&dateBeginUpdated=&dateEndUpdated=&dateBeginCompleted=&dateEndCompleted=&personID=&role=Any&journalID=&publisherID=&sortBy=revisionDate&count=50"><span>Defining the biological integrity of <span class="hlt">coral</span> <span class="hlt">reefs</span> using a biological condition gradient framework</span></a></p> <p><a target="_blank" href="http://oaspub.epa.gov/eims/query.page">EPA Science Inventory</a></p> <p></p> <p></p> <p>Under authority of the Clean Water Act (CWA), the US EPA is committed to protecting the biological integrity of tropical <span class="hlt">ecosystems</span>, including mangroves, seagrasses and <span class="hlt">coral</span> <span class="hlt">reefs</span> that lie within the 3-mile limit of the territorial seas. The biological condition gradient (BCG) w...</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5786882','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5786882"><span>Historical baselines of <span class="hlt">coral</span> cover on tropical <span class="hlt">reefs</span> as estimated by expert opinion</span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Cheung, William W.L.; Bruno, John F.</p> <p>2018-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are important habitats that represent global marine biodiversity hotspots and provide important benefits to people in many tropical regions. However, <span class="hlt">coral</span> <span class="hlt">reefs</span> are becoming increasingly threatened by climate change, overfishing, habitat destruction, and pollution. Historical baselines of <span class="hlt">coral</span> cover are important to understand how much <span class="hlt">coral</span> cover has been lost, e.g., to avoid the ‘shifting baseline syndrome’. There are few quantitative observations of <span class="hlt">coral</span> <span class="hlt">reef</span> cover prior to the industrial revolution, and therefore baselines of <span class="hlt">coral</span> <span class="hlt">reef</span> cover are difficult to estimate. Here, we use expert and ocean-user opinion surveys to estimate baselines of global <span class="hlt">coral</span> <span class="hlt">reef</span> cover. The overall mean estimated baseline <span class="hlt">coral</span> cover was 59% (±19% standard deviation), compared to an average of 58% (±18% standard deviation) estimated by professional scientists. We did not find evidence of the shifting baseline syndrome, whereby respondents who first observed <span class="hlt">coral</span> <span class="hlt">reefs</span> more recently report lower estimates of baseline <span class="hlt">coral</span> cover. These estimates of historical <span class="hlt">coral</span> <span class="hlt">reef</span> baseline cover are important for scientists, policy makers, and managers to understand the extent to which <span class="hlt">coral</span> <span class="hlt">reefs</span> have become depleted and to set appropriate recovery targets. PMID:29379692</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/29379692','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/29379692"><span>Historical baselines of <span class="hlt">coral</span> cover on tropical <span class="hlt">reefs</span> as estimated by expert opinion.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Eddy, Tyler D; Cheung, William W L; Bruno, John F</p> <p>2018-01-01</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> are important habitats that represent global marine biodiversity hotspots and provide important benefits to people in many tropical regions. However, <span class="hlt">coral</span> <span class="hlt">reefs</span> are becoming increasingly threatened by climate change, overfishing, habitat destruction, and pollution. Historical baselines of <span class="hlt">coral</span> cover are important to understand how much <span class="hlt">coral</span> cover has been lost, e.g., to avoid the 'shifting baseline syndrome'. There are few quantitative observations of <span class="hlt">coral</span> <span class="hlt">reef</span> cover prior to the industrial revolution, and therefore baselines of <span class="hlt">coral</span> <span class="hlt">reef</span> cover are difficult to estimate. Here, we use expert and ocean-user opinion surveys to estimate baselines of global <span class="hlt">coral</span> <span class="hlt">reef</span> cover. The overall mean estimated baseline <span class="hlt">coral</span> cover was 59% (±19% standard deviation), compared to an average of 58% (±18% standard deviation) estimated by professional scientists. We did not find evidence of the shifting baseline syndrome, whereby respondents who first observed <span class="hlt">coral</span> <span class="hlt">reefs</span> more recently report lower estimates of baseline <span class="hlt">coral</span> cover. These estimates of historical <span class="hlt">coral</span> <span class="hlt">reef</span> baseline cover are important for scientists, policy makers, and managers to understand the extent to which <span class="hlt">coral</span> <span class="hlt">reefs</span> have become depleted and to set appropriate recovery targets.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/19323170','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/19323170"><span>Symbiont diversity may help <span class="hlt">coral</span> <span class="hlt">reefs</span> survive moderate climate change.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Baskett, Marissa L; Gaines, Steven D; Nisbet, Roger M</p> <p>2009-01-01</p> <p>Given climate change, thermal stress-related mass <span class="hlt">coral</span>-bleaching events present one of the greatest anthropogenic threats to <span class="hlt">coral</span> <span class="hlt">reefs</span>. While <span class="hlt">corals</span> and their symbiotic algae may respond to future temperatures through genetic adaptation and shifts in community compositions, the climate may change too rapidly for <span class="hlt">coral</span> response. To test this potential for response, here we develop a model of <span class="hlt">coral</span> and symbiont ecological dynamics and symbiont evolutionary dynamics. Model results without variation in symbiont thermal tolerance predict <span class="hlt">coral</span> <span class="hlt">reef</span> collapse within decades under multiple future climate scenarios, consistent with previous threshold-based predictions. However, model results with genetic or community-level variation in symbiont thermal tolerance can predict <span class="hlt">coral</span> <span class="hlt">reef</span> persistence into the next century, provided low enough greenhouse gas emissions occur. Therefore, the level of greenhouse gas emissions will have a significant effect on the future of <span class="hlt">coral</span> <span class="hlt">reefs</span>, and accounting for biodiversity and biological dynamics is vital to estimating the size of this effect.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/23584968','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/23584968"><span>Near-future ocean acidification causes differences in microbial associations within diverse <span class="hlt">coral</span> <span class="hlt">reef</span> taxa.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Webster, N S; Negri, A P; Flores, F; Humphrey, C; Soo, R; Botté, E S; Vogel, N; Uthicke, S</p> <p>2013-04-01</p> <p>Microorganisms form symbiotic partnerships with a diverse range of marine organisms and can be critical to the health and survival of their hosts. Despite the importance of these relationships, the sensitivity of symbiotic microbes to ocean acidification (OA) is largely unknown and this needs to be redressed to adequately predict marine <span class="hlt">ecosystem</span> resilience in a changing climate. We adopted a profiling approach to explore the sensitivity of microbes associated with <span class="hlt">coral</span> <span class="hlt">reef</span> biofilms and representatives of three ecologically important calcifying invertebrate phyla [<span class="hlt">corals</span>, foraminifera and crustose coralline algae (CCA)] to OA. The experimental design for this study comprised four pHs consistent with current IPCC predictions for the next few centuries (pHNIST 8.1, 7.9, 7.7, 7.5); these pH/pCO₂ conditions were produced in flow-through aquaria using CO₂ bubbling. All reduced pH/increased pCO₂ treatments caused clear differences in the microbial communities associated with <span class="hlt">coral</span>, foraminifera, CCA and <span class="hlt">reef</span> biofilms over 6 weeks, while no visible signs of host stress were detected over this period. The microbial communities of <span class="hlt">coral</span>, foraminifera, CCA and biofilms were significantly different between pH 8.1 (pCO₂ = 464 μatm) and pH 7.9 (pCO₂ = 822 μatm), a concentration likely to be exceeded by the end of the present century. This trend continued at lower pHs/higher pCO₂. 16S rRNA gene sequencing revealed variable and species-specific changes in the microbial communities with no microbial taxa consistently present or absent from specific pH treatments. The high sensitivity of <span class="hlt">coral</span>, foraminifera, CCA and biofilm microbes to OA conditions projected to occur by 2100 is a concern for <span class="hlt">reef</span> <span class="hlt">ecosystems</span> and highlights the need for urgent research to assess the implications of microbial shifts for host health and <span class="hlt">coral</span> <span class="hlt">reef</span> processes. © 2012 Society for Applied Microbiology and Blackwell Publishing Ltd.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5832214','PMC'); return false;" href="https://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pmcentrez&artid=5832214"><span>Advancing the integration of spatial data to map human and natural drivers on <span class="hlt">coral</span> <span class="hlt">reefs</span></span></a></p> <p><a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pmc">PubMed Central</a></p> <p>Gove, Jamison M.; Walecka, Hilary R.; Donovan, Mary K.; Williams, Gareth J.; Jouffray, Jean-Baptiste; Crowder, Larry B.; Erickson, Ashley; Falinski, Kim; Friedlander, Alan M.; Kappel, Carrie V.; Kittinger, John N.; McCoy, Kaylyn; Norström, Albert; Nyström, Magnus; Oleson, Kirsten L. L.; Stamoulis, Kostantinos A.; White, Crow; Selkoe, Kimberly A.</p> <p>2018-01-01</p> <p>A major challenge for <span class="hlt">coral</span> <span class="hlt">reef</span> conservation and management is understanding how a wide range of interacting human and natural drivers cumulatively impact and shape these <span class="hlt">ecosystems</span>. Despite the importance of understanding these interactions, a methodological framework to synthesize spatially explicit data of such drivers is lacking. To fill this gap, we established a transferable data synthesis methodology to integrate spatial data on environmental and anthropogenic drivers of <span class="hlt">coral</span> <span class="hlt">reefs</span>, and applied this methodology to a case study location–the Main Hawaiian Islands (MHI). Environmental drivers were derived from time series (2002–2013) of climatological ranges and anomalies of remotely sensed sea surface temperature, chlorophyll-a, irradiance, and wave power. Anthropogenic drivers were characterized using empirically derived and modeled datasets of spatial fisheries catch, sedimentation, nutrient input, new development, habitat modification, and invasive species. Within our case study system, resulting driver maps showed high spatial heterogeneity across the MHI, with anthropogenic drivers generally greatest and most widespread on O‘ahu, where 70% of the state’s population resides, while sedimentation and nutrients were dominant in less populated islands. Together, the spatial integration of environmental and anthropogenic driver data described here provides a first-ever synthetic approach to visualize how the drivers of <span class="hlt">coral</span> <span class="hlt">reef</span> state vary in space and demonstrates a methodological framework for implementation of this approach in other regions of the world. By quantifying and synthesizing spatial drivers of change on <span class="hlt">coral</span> <span class="hlt">reefs</span>, we provide an avenue for further research to understand how drivers determine <span class="hlt">reef</span> diversity and resilience, which can ultimately inform policies to protect <span class="hlt">coral</span> <span class="hlt">reefs</span>. PMID:29494613</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('http://hdl.handle.net/2060/20090010048','NASA-TRS'); return false;" href="http://hdl.handle.net/2060/20090010048"><span>Photography of <span class="hlt">Coral</span> <span class="hlt">Reefs</span> from ISS</span></a></p> <p><a target="_blank" href="http://ntrs.nasa.gov/search.jsp">NASA Technical Reports Server (NTRS)</a></p> <p>Robinson, Julie A.</p> <p>2009-01-01</p> <p>This viewgraph presentation reviews the uses of photography from the International Space Station (ISS) in studying Earth's <span class="hlt">coral</span> <span class="hlt">reefs</span>. The photographs include <span class="hlt">reefs</span> in various oceans . The photographs have uses for science in assisting NASA mapping initiatives, distribution worldwide through <span class="hlt">Reef</span>Base, and by biologist in the field.</p> </li> <li> <p><a target="_blank" onclick="trackOutboundLink('https://www.ncbi.nlm.nih.gov/pubmed/26522161','PUBMED'); return false;" href="https://www.ncbi.nlm.nih.gov/pubmed/26522161"><span>Estimating the willingness to pay to protect <span class="hlt">coral</span> <span class="hlt">reefs</span> from potential damage caused by climate change--The evidence from Taiwan.</span></a></p> <p><a target="_blank" href="https://www.ncbi.nlm.nih.gov/entrez/query.fcgi?DB=pubmed">PubMed</a></p> <p>Tseng, William Wei-Chun; Hsu, Shu-Han; Chen, Chi-Chung</p> <p>2015-12-30</p> <p><span class="hlt">Coral</span> <span class="hlt">reefs</span> constitute the most biologically productive and diverse <span class="hlt">ecosystem</span>, and provide various goods and services including those related to fisheries, marine tourism, coastal protection, and medicine. However, they are sensitive to climate change and rising temperatures. Taiwan is located in the central part of the world's distribution of <span class="hlt">coral</span> <span class="hlt">reefs</span> and has about one third of the <span class="hlt">coral</span> species in the world. This study estimates the welfare losses associated with the potential damage to <span class="hlt">coral</span> <span class="hlt">reefs</span> in Taiwan caused by climate change. The contingent valuation method adopted includes a pre-survey, a face-to-face formal survey, and photo illustrations used to obtain reliable data. Average annual personal willingness to pay is found to be around US$35.75 resulting in a total annual willingness to pay of around US$0.43 billion. These high values demonstrate that <span class="hlt">coral</span> <span class="hlt">reefs</span> in Taiwan deserve to be well preserved, which would require a dedicated agency and ocean reserves.</p> </li> </ol> <div class="pull-right"> <ul class="pagination"> <li><a href="#" onclick='return showDiv("page_1");'>«</a></li> <li><a href="#" onclick='return showDiv("page_21");'>21</a></li> <li><a href="#" onclick='return showDiv("page_22");'>22</a></li> <li><a href="#" onclick='return showDiv("page_23");'>23</a></li> <li><a href="#" onclick='return showDiv("page_24");'>24</a></li> <li class="active"><span>25</span></li> <li><a href="#" onclick='return showDiv("page_25");'>»</a></li> </ul> </div> </div><!-- col-sm-12 --> </div><!-- row --> </div><!-- page_25 --> <div class="footer-extlink text-muted" style="margin-bottom:1rem; text-align:center;">Some links on this page may take you to non-federal websites. 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