Mechanosensitive channels of Escherichia coli: the MscL gene, protein, and activities

NASA Technical Reports Server (NTRS)

Sukharev, S. I.; Blount, P.; Martinac, B.; Kung, C.

1997-01-01

Although mechanosensory responses are ubiquitous and diverse, the molecular bases of mechanosensation in most cases remain mysterious MscL, a mechanosensitive channel of large conductance of Escherichia coli and its bacterial homologues are the first and currently only channel molecules shown to directly sense mechanical stretch of the membrane. In response to the tension conveyed via the lipid bilayer, MscL increases its open probability by several orders of magnitude. In the present review we describe the identification, cloning, and first sets of biophysical and structural data on this simplest mechanosensory molecule. We discovered a 2.5-ns mechanosensitive conductance in giant E. coli spheroplasts. Using chromatographies to enrich the target and patch clamp to assay the channel activity in liposome-reconstituted fractions, we identified the MscL protein and cloned the mscL gene. MscL comprises 136 amino acid residues (15 kDa), with two highly hydrophobic regions, and resides in the inner membrane of the bacterium. PhoA-fusion experiments indicate that the protein spans the membrane twice with both termini in the cytoplasm. Spectroscopic techniques show that it is highly helical. Expression of MscL tandems and covalent cross-linking suggest that the active channel complex is a homo-hexamer. We have identified several residues, which when deleted or substituted, affect channel kinetics or mechanosensitivity. Although unique when discovered, highly conserved MscL homologues in both gram-negative and gram-positive bacteria have been found, suggesting their ubiquitous importance among bacteria.

Luminescence signal profiling: a new proxy for sedimentologically "invisible" marine Mass Transport Deposits (MTDs)

NASA Astrophysics Data System (ADS)

López, Gloria I.; Bialik, Or; Waldmann, Nicolas

2017-04-01

When dealing with fine-grained, organic-rich, colour-monotone, underwater marine sediment cores retrieved from the continental shelf or slope, the initial visual impression, upon split-opening the vessels, is often of a "disappointing" homogeneous, monotonous, continuous archive. Only after thorough, micro- to macro-scale, multi-parameter investigations the sediment reveals its treasures, initially by performing some measurements on the intact core itself, hence depicting for the first time its contents, and subsequently by carrying out the destructive, multi-proxy sample-based analyses. Usually, routine Multi-Sensor Core Logger (MSCL) measurements of petrophysical parameters (e.g. magnetic susceptibility, density, P-Wave velocity) on un-split sediment cores are the first undertaken while still on-board in the field or back at the laboratory. Less often done, but equally valuable, are continuous X-Ray and CT scan imaging of the same intact archives. Upon splitting, routine granulometry, micro- and macro-fossil and invertebrate identification, total organic / inorganic carbon content (TOC / TIC), amid other analyses take place. The geochronology component is also established usually by AMS 14C on selected organic-rich units, and less common is Optically Stimulated Luminescence (OSL) dating used on the coarser-grained, siliciclastic layers. A relatively new tool used in Luminescence, the Portable OSL Reader, employed to rapidly assess the luminescence signal of untreated poly-mineral samples to assist with targeted field sampling for full OSL dating, was used for the first time in marine sediment cores as a novel petrophysical characterization tool with astonishing results. In this study, two 2 m-long underwater piston sediment cores recovered from 200 m depths on the continental shelf off-southern Israel, were subjected to pulsed-photon stimulation (PPSL) obtaining favourable luminescence signals along their entire lengths. Astoundingly, luminescence signals were obtained on both, already split-opened cores. Both cores depicted the monotonous characteristics of homogeneousness down-core as per most of the results obtained from the non-destructive and destructive tests. One of the cores showed several small higher energy events, including a Mass Transport Deposit (MTD) within its first 10 cm, only fully visible on the CT scan imaging, the PPSL profile and particle size distribution plot. This initial investigation demonstrates the feasibility and usefulness of luminescence profiling as a new sedimentological and petrophysical proxy to better visualize homogeneous yet complex, fine-grained, underwater archives. Moreover, it helps to understand the continuity of the stratigraphy and linearity of deposition of the sediment, besides assisting on the estimation of relative ages provided that good OSL ages are obtained throughout the recovered archive.

Visualisation of the mechanosensitive channel of large conductance in bacteria using confocal microscopy.

PubMed

Norman, Christel; Liu, Zhen-Wei; Rigby, Paul; Raso, Albert; Petrov, Yevgeniy; Martinac, Boris

2005-07-01

The mechanosensitive channel of large conductance (MscL) plays an important role in the survival of bacterial cells to hypo-osmotic shock. This channel has been extensively studied and its sequence, structure and electrophysiological characteristics are well known. Here we present a method to visualise MscL in living bacteria using confocal microscopy. By creating a gene fusion between mscl and the gene encoding the green fluorescent protein (GFP) we were able to express the fusion protein MscL-GFP in bacteria. We show that MscL-GFP is present in the cytoplasmic membrane and forms functional channels. These channels have the same characteristics as wild-type MscL, except that they require more pressure to open. This method could prove an interesting, non-invasive, tool to study the localisation and the regulation of expression of MscL in bacteria.

Genetic Complementation of the Obligate Marine Actinobacterium Salinispora tropica with the Large Mechanosensitive Channel Gene mscL Rescues Cells from Osmotic Downshock

PubMed Central

Bucarey, Sergio A.; Penn, Kevin; Paul, Lauren; Fenical, William

2012-01-01

Marine actinomycetes in the genus Salinispora fail to grow when seawater is replaced with deionized (DI) water in complex growth media. While bioinformatic analyses have led to the identification of a number of candidate marine adaptation genes, there is currently no experimental evidence to support the genetic basis for the osmotic requirements associated with this taxon. One hypothesis is that the lineage-specific loss of mscL is responsible for the failure of strains to grow in media prepared with DI water. The mscL gene encodes a conserved transmembrane protein that reduces turgor pressure under conditions of acute osmotic downshock. In the present study, the mscL gene from a Micromonospora strain capable of growth on media prepared with DI water was transformed into S. tropica strain CNB-440. The single-copy, chromosomal genetic complementation yielded a recombinant Salinispora mscL+ strain that demonstrated an increased capacity to survive osmotic downshock. The enhanced survival of the S. tropica transformant provides experimental evidence that the loss of mscL is associated with the failure of Salinispora spp. to grow in low-osmotic-strength media. PMID:22492446

Late Glacial to Holocene evolution and sea-level history of Gulf of Gemlik, Sea of Marmara, Turkey

NASA Astrophysics Data System (ADS)

Sabuncu, Asen; Kadir Eriş, K.; Kaslilar, Ayse; Namık Çaǧatay, M.; Gasperini, Luca; Filikçi, Betül

2016-04-01

The Gulf of Gemlik is an E-W elongated trans-tensional basin with a maximum depth of 113 m, located on the middle strand of the North Anatolian Fault (NAF) in the south eastern part of the Sea of Marmara (SoM). While during the Holocene the sea level in the Gulf of Gemlik changed in tandem with the water level changes in the SoM, it may have been different in the late glacial when the Sea of Marmara was lacustrine. Beside the tectonic activity related to the NAFZ, eustatic sea level changes would have controlled the basin evolution and consequent sedimentary history during the different paleocanographic phases of the SoM. Considering the limited studies on the late glacial-Holocene stratigraph of the Gulf of Gemlik, this study aims to investigate the depositional units and their environments with respect to different allogenic and autogenic controls. For these purposes, we analyzed over 300 2 - 7 kHz bandwidth high-resolution gridded seismic sub-bottom CHIRP profiles together with 70 kHz high resolution multibeam bathymetry with backscatter data. Four seismic stratigraphic units were defined and correlated with chronstratigraphic units in five piston cores covering the last 15.8 ka BP according to radiocarbon ages (14C). The depth-scale accuracy of chronostratigraphic units in cores is of key importance for the precise calculation of sedimentation rates. Correlation between the seismic profiles and cores were made by matching Multi-Sensor Core-Logger (MSCL) data and seismic reflection coefficients and amplitudes for different stratigraphic units. The impedance data derived from the logger were used to generate a synthetic seismogram. We used an approach to display, estimate, and correct the depth-scale discrepancies due to oversampling affecting the upper part of sedimentary series during piston coring. The method is based on the resynchronization of synthetic seismograms computed from high-quality physical property logs to the corresponding CHIRP profiles. Each sequence boundary represented by different reflection coefficient and various amplitude values were mapped for the whole gulf area from the pseudo-3D seismic data. Isopach and isochron maps were generated using 2-D cubic B-spline interpolation method to reconstruct basin evolution models through late glacial to Holocene. Each map shows various depositional period with respect to water level changes that has been controlled by sea level fluctuations in the SoM. The seismic units labeled as Unit S1-S4 from top to bottom display different seismic facies and geometries. Unit S1 is a transgressive marine mud drape younger than 10.6 ka BP, which lacustrine sediments, Unit S2 is a parallel bedded mud drape in the basin and progradational clinoforms on the shelf edge. It is dated between 13.9-10.6 ka BP, Unit S3 is characterized by erosional gullies and a clinoform architecture indicating a deltaic system dated between 15.8-13.9 ka BP. Unit S4 represents mounded sediments that are truncated by erosional gullies and dated >15.8 ka BP. Key words: Gulf of Gemlik, Seismic Stratigraphy, Numerical Modelling, Late Pleistocene to Holocene

Unusual Physical Properties of the Chicxulub Crater Peak Ring: Results from IODP/ICDP Expedition 364

NASA Astrophysics Data System (ADS)

Christeson, G. L.; Gebhardt, C.; Gulick, S. P. S.; Le Ber, E.; Lofi, J.; Morgan, J. V.; Nixon, C.; Rae, A.; Schmitt, D. R.

2017-12-01

IODP/ICDP Expedition 364 Hole M0077A drilled into the peak ring of the Chicxulub impact crater, recovering core between 505.7 and 1334.7 m below the seafloor (mbsf). Physical property measurements include wireline logging data, a vertical seismic profile (VSP), Multi-Sensor Core Logger (MSCL) measurements, and discrete sample measurements. The Hole M0077A peak ring rocks have unusual physical properties. Across the boundary between post-impact sediment and crater breccia we measure a sharp decrease in velocities and densities, and an increase in porosity. Mean crater breccia values are 3000-3300 m/s, 2.14-2.15 g/cm3, and 31% for velocity, density, and porosity, respectively. This zone is also associated with a low-frequency reflector package on MCS profiles and a low-velocity layer in FWI images, both confirmed from the VSP dataset. The thin (24 m) crater melt unit has mean velocity measurements of 3800-4150 m/s, density measurements of 2.32-2.34 g/cm3, and porosity measurements of 20%; density and porosity values are intermediate between the overlying impact breccia and underlying granitic basement, while the velocity values are similar to those for the underlying basement. The Hole M0077A crater melt unit velocities and densities are considerably less than values of 5800 m/s and 2.68 g/cm3 measured at an onshore well located in the annular trough. The uplifted granitic peak ring materials have mean values of 4100-4200 m/s, 2.39-2.44 g/cm3, and 11% for compressional wave velocity, density, and porosity, respectively; these values differ significantly from typical granite which has higher velocities (5400-6000 m/s) and densities (2.62-2.67 g/cm3), and lower porosities (<1%). All Hole M0077A peak-ring velocity, density, and porosity measurements indicate considerable fracturing, and are consistent with numerical models for peak-ring formation.

Droplet interface bilayer reconstitution and activity measurement of the mechanosensitive channel of large conductance from Escherichia coli.

PubMed

Barriga, Hanna M G; Booth, Paula; Haylock, Stuart; Bazin, Richard; Templer, Richard H; Ces, Oscar

2014-09-06

Droplet interface bilayers (DIBs) provide an exciting new platform for the study of membrane proteins in stable bilayers of controlled composition. To date, the successful reconstitution and activity measurement of membrane proteins in DIBs has relied on the use of the synthetic lipid 1,2-diphytanoyl-sn-glycero-3-phosphocholine (DPhPC). We report the functional reconstitution of the mechanosensitive channel of large conductance (MscL) into DIBs composed of 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC), a lipid of significantly greater biological relevance than DPhPC. MscL functionality has been demonstrated using a fluorescence-based assay, showing that dye flow occurs across the DIB when MscL is gated by the cysteine reactive chemical 2-(trimethylammonium)ethyl methane thiosulfonate bromide (MTSET). MscL has already been the subject of a number of studies investigating its interaction with the membrane. We propose that this method will pave the way for future MscL studies looking in detail at the effects of controlled composition or membrane asymmetry on MscL activity using biologically relevant lipids and will also be applicable to other lipid-protein systems, paving the way for the study of membrane proteins in DIBs with biologically relevant lipids.

UAS-NAS Live Virtual Constructive Distributed Environment (LVC): LVC Gateway, Gateway Toolbox, Gateway Data Logger (GDL), SaaProc Software Design Description

NASA Technical Reports Server (NTRS)

Jovic, Srboljub

2015-01-01

This document provides the software design description for the two core software components, the LVC Gateway, the LVC Gateway Toolbox, and two participants, the LVC Gateway Data Logger and the SAA Processor (SaaProc).

Force transduction and lipid binding in MscL: A continuum-molecular approach

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vanegas, Juan M.; Arroyo, Marino; Fotiadis, Dimitrios

2014-12-01

The bacterial mechanosensitive channel MscL, a small protein mainly activated by membrane tension, is a central model system to study the transduction of mechanical stimuli into chemical signals. Mutagenic studies suggest that MscL gating strongly depends on both intra-protein and interfacial lipid-protein interactions. However, there is a gap between this detailed chemical information and current mechanical models of MscL gating. Here, we investigate the MscL bilayer-protein interface through molecular dynamics simulations, and take a combined continuum-molecular approach to connect chemistry and mechanics. We quantify the effect of membrane tension on the forces acting on the surface of the channel, andmore » identify interactions that may be critical in the force transduction between the membrane and MscL. We find that the local stress distribution on the protein surface is largely asymmetric, particularly under tension, with the cytoplasmic side showing significantly larger and more localized forces, which pull the protein radially outward. The molecular interactions that mediate this behavior arise from hydrogen bonds between the electronegative oxygens in the lipid headgroup and a cluster of positively charged lysine residues on the amphipathic S1 domain and the C-terminal end of the second trans-membrane helix. We take advantage of this strong interaction (estimated to be 10–13 kT per lipid) to actuate the channel (by applying forces on protein-bound lipids) and explore its sensitivity to the pulling magnitude and direction. We conclude by highlighting the simple motif that confers MscL with strong anchoring to the bilayer, and its presence in various integral membrane proteins including the human mechanosensitive channel K2P1 and bovine rhodopsin.« less

Geochemical Dataset of the Rhone River Delta (Lake Geneva) Sediments - Disentangling Human Impacts from Climate Change

NASA Astrophysics Data System (ADS)

Silva, T. A.; Girardclos, S.; Loizeau, J. L.

2016-12-01

Lake sediment records are often the most complete continental archives. In the last 200 years, in addition to climatic variability, humans have strongly impacted lake watersheds around the world. During the 20th century the Rhone River and its watershed upstream Lake Geneva (Switzerland/France) have been subject to river channelization, dam construction, water flow regulation, water and sediment abstraction as well as various land use changes. Under the scope of the SEDFATE project (Swiss National Science Foundation nº147689) we address human and climatic impact on the sediment transfer from the Rhone River watershed to Lake Geneva. Nineteen short sediment cores were collected in the Rhone River delta area in May 2014. Cores have been scanned with MSCL and XRF, sub-sampled every 1cm and 8 cores were dated by radiometric methods (137Cs and 210Pb). Photographs taken right after core opening were used for lithological description and in addition to MSCL data were used to correlate cores. Core dating shows that mass accumulation rates decreased in the 1964-1986 interval and then increased again in the interval between 1986-2014. XRF elements and ratios, known to indicate detrital sources (Al, Al/Si, Fe, K, Mn, Rb, Si, Ti, Ti/Ca), show that clastic input diminished from 1964 to 1986 and re-increased to the present. Other elemental (Zr/Rb, Zr/K, Si/Ti) and geophysical data (magnetic susceptibility) combined with lithology identify density flow deposits vs hemipelagic sedimentation. Changes in frequency of these event deposits indicate changes in the sedimentation patterns in the Rhone River sublacustrine delta during the last century. From these results we hypothesize that a significant sediment amount was abstracted from the system after the major dam constructions in the 1950's and that, since the 1990's, a contrary signal is due to increased sediment loads that follows glacial melting due to global warming.

A large iris-like expansion of a mechanosensitive channel protein induced by membrane tension

NASA Technical Reports Server (NTRS)

Betanzos, Monica; Chiang, Chien-Sung; Guy, H. Robert; Sukharev, Sergei

2002-01-01

MscL, a bacterial mechanosensitive channel of large conductance, is the first structurally characterized mechanosensor protein. Molecular models of its gating mechanisms are tested here. Disulfide crosslinking shows that M1 transmembrane alpha-helices in MscL of resting Escherichia coli are arranged similarly to those in the crystal structure of MscL from Mycobacterium tuberculosis. An expanded conformation was trapped in osmotically shocked cells by the specific bridging between Cys 20 and Cys 36 of adjacent M1 helices. These bridges stabilized the open channel. Disulfide bonds engineered between the M1 and M2 helices of adjacent subunits (Cys 32-Cys 81) do not prevent channel gating. These findings support gating models in which interactions between M1 and M2 of adjacent subunits remain unaltered while their tilts simultaneously increase. The MscL barrel, therefore, undergoes a large concerted iris-like expansion and flattening when perturbed by membrane tension.

Mechanosensitive channels in bacteria as membrane tension reporters

NASA Technical Reports Server (NTRS)

Sukharev, S.

1999-01-01

The purpose of this short review is to discuss recent data on the molecular structure and mechanism of gating of MscL, a mechanosensitive channel of large conductance from Escherichia coli. MscL is the first isolated molecule shown to convert mechanical stress of the membrane into a simple response, the opening of a large aqueous pore. The functional complex appears to be a stable homo-pentamer of 15-kDa subunits, the gating transitions in which are driven by stretch forces conveyed through the lipid bilayer. We have measured the open probability of MscL and the kinetics of transitions as a function of membrane tension. The parameters extracted from the single-channel current recordings and dose-response curves such as the energy difference between the closed, open, and intermediate conducting states, and the transition-related changes in protein dimensions suggest a large conformational rearrangement of the channel complex. The estimations show that in native conditions MscL openings could be driven primarily by forces of osmotic nature. The thermodynamic and spatial parameters reasonably correlate with the available data on the structure of a single MscL subunit and multimeric organization of the complex. Combined with the functional analysis of mutations, these data give grounds to hypotheses on the nature of the channel mechanosensitivity.

Is propensity to obesity associated with the diurnal pattern of core body temperature?

PubMed

Hynd, P I; Czerwinski, V H; McWhorter, T J

2014-02-01

Obesity affects more than half a billion people worldwide, but the underlying causes remain unresolved. It has been proposed that propensity to obesity may be associated with differences between individuals in metabolic efficiency and in the energy used for homeothermy. It has also been suggested that obese-prone individuals differ in their responsiveness to circadian rhythms. We investigated both these hypotheses by measuring the core body temperature at regular and frequent intervals over a diurnal cycle, using indigestible temperature loggers in two breeds of canines known to differ in propensity to obesity, but prior to divergence in fatness. Greyhounds (obesity-resistant) and Labradors (obesity-prone) were fed indigestible temperature loggers. Gastrointestinal temperature was recorded at 10-min intervals for the period of transit of the logger. Diet, body condition score, activity level and environment were similar for both groups. Energy digestibility was also measured. The mean core body temperature in obesity-resistant dogs (38.27 °C) was slightly higher (P<0.001) than in obesity-prone dogs (38.18 °C) and the former had a greater variation (P<0.001) in 24h circadian core temperature. There were no differences in diet digestibility. Canines differing in propensity to obesity, but prior to its onset, differed little in mean core temperature, supporting similar findings in already-obese and lean humans. Obese-prone dogs were less variable in daily core temperature fluctuations, suggestive of a degree of circadian decoupling.

Towards an understanding of the structural and functional properties of MscL, a mechanosensitive channel in bacteria

NASA Technical Reports Server (NTRS)

Blount, P.; Sukharev, S. I.; Moe, P. C.; Nagle, S. K.; Kung, C.

1996-01-01

Whether it be to sense a touch, arterial pressure, or an osmotic gradient across a cell membrane, essentially all living organisms require the capability of detecting mechanical force. Electrophysiological evidence has suggested that mechanosensitive ion channels play a major role in many systems where mechanical force is detected. But, despite their biological importance, determination of the most basic structural and functional features of mechanosensitive channels has only recently become possible. A gene called mscL, which was isolated from Escherichia coli, was the first gene shown to encode a mechanosensitive channel activity. This channel directly responds to tension in the membrane; no other proteins are required. MscL appears to be a homohexamer of a 136 amino acid polypeptide that is highly alpha helical, contains two transmembrane domains, and has both the amino and carboxyl termini in the cytoplasm. The study of the MscL protein remains, to date, one of the most viable options for understanding the structural and functional characteristics of a mechanosensitive channel.

Modulation of channel activity and gadolinium block of MscL by static magnetic fields.

PubMed

Petrov, Evgeny; Martinac, Boris

2007-02-01

The magnetic field of the Earth has for long been known to influence the behaviour and orientation of a variety of living organisms. Experimental studies of the magnetic sense have, however, been impaired by the lack of a plausible cellular and/or molecular mechanism providing meaningful explanation for detection of magnetic fields by these organisms. Recently, mechanosensitive (MS) ion channels have been implied to play a role in magnetoreception. In this study we have investigated the effect of static magnetic fields (SMFs) of moderate intensity on the activity and gadolinium block of MscL, the bacterial MS channel of large conductance, which has served as a model channel to study the basic physical principles of mechanosensory transduction in living cells. In addition to showing that direct application of the magnetic field decreased the activity of the MscL channel, our study demonstrates for the first time that SMFs can reverse the effect of gadolinium, a well-known blocker of MS channels. The results of our study are consistent with a notion that (1) the effects of SMFs on the MscL channels may result from changes in physical properties of the lipid bilayer due to diamagnetic anisotropy of phospholipid molecules and consequently (2) cooperative superdiamagnetism of phospholipid molecules under influence of SMFs could cause displacement of Gd(3+) ions from the membrane bilayer and thus remove the MscL channel block.

Hominin Sites and Paleolakes Drilling Project. Chew Bahir, southern Ethiopia: How to get from three tonnes of sediment core to > 500 ka of continuous climate history?

NASA Astrophysics Data System (ADS)

Foerster, Verena; Asrat, Asfawossen; Cohen, Andrew S.; Gromig, Raphael; Günter, Christina; Junginger, Annett; Lamb, Henry F.; Schaebitz, Frank; Trauth, Martin H.

2016-04-01

In search of the environmental context of the evolution and dispersal of Homo sapiens and our close relatives within and beyond the African continent, the ICDP-funded Hominin Sites and Paleolakes Drilling Project (HSPDP) has recently cored five fluvio-lacustrine archives of climate change in East Africa. The sediment cores collected in Ethiopia and Kenya are expected to provide valuable insights into East African environmental variability during the last ~3.5 Ma. The tectonically-bound Chew Bahir basin in the southern Ethiopian rift is one of the five sites within HSPDP, located in close proximity to the Lower Omo River valley, the site of the oldest known fossils of anatomically modern humans. In late 2014, the two cores (279 and 266 m long respectively, HSPDP-CHB14-2A and 2B) were recovered, summing up to nearly three tonnes of mostly calcareous clays and silts. Deciphering an environmental record from multiple records, from the source region of modern humans could eventually allow us to reconstruct the pronounced variations of moisture availability during the transition into Middle Stone Age, and its implications for the origin and dispersal of Homo sapiens. Here we present the first results of our analysis of the Chew Bahir cores. Following the HSPDP protocols, the two parallel Chew Bahir sediment cores have been merged into one single, 280 m long and nearly continuous (>90%) composite core on the basis of a high resolution MSCL data set (e.g., magnetic susceptibility, gamma ray density, color intensity transects, core photographs). Based on the obvious cyclicities in the MSCL, correlated with orbital cycles, the time interval covered by our sediment archive of climate change is inferred to span the last 500-600 kyrs. Combining our first results from the long cores with the results from the accomplished pre-study of short cores taken in 2009/10 along a NW-SE transect across the basin (Foerster et al., 2012, Trauth et al., 2015), we have developed a hypothesis linking climate forcing and paleoenvironmental signal formation processes in the basin (e.g. the inverse correlation of the K flux with precipitation in the catchment), providing an important prerequisite for understanding the environmental record contained in the long sediment cores. The good recovery and anticipated high time resolution of the cores will give us a continuous record of environmental fluctuations on decadal to orbital timescales, which will allow us to test current hypotheses of the influence of climate on human evolution and dispersal.

Mechano-sensitization of mammalian neuronal networks through expression of the bacterial large-conductance mechanosensitive ion channel

PubMed Central

Contestabile, Andrea; Moroni, Monica; Hallinan, Grace I.; Palazzolo, Gemma; Chad, John; Deinhardt, Katrin; Carugo, Dario

2018-01-01

ABSTRACT Development of remote stimulation techniques for neuronal tissues represents a challenging goal. Among the potential methods, mechanical stimuli are the most promising vectors to convey information non-invasively into intact brain tissue. In this context, selective mechano-sensitization of neuronal circuits would pave the way to develop a new cell-type-specific stimulation approach. We report here, for the first time, the development and characterization of mechano-sensitized neuronal networks through the heterologous expression of an engineered bacterial large-conductance mechanosensitive ion channel (MscL). The neuronal functional expression of the MscL was validated through patch-clamp recordings upon application of calibrated suction pressures. Moreover, we verified the effective development of in-vitro neuronal networks expressing the engineered MscL in terms of cell survival, number of synaptic puncta and spontaneous network activity. The pure mechanosensitivity of the engineered MscL, with its wide genetic modification library, may represent a versatile tool to further develop a mechano-genetic approach. This article has an associated First Person interview with the first author of the paper. PMID:29361543

Cave Pearl Data Logger: A Flexible Arduino-Based Logging Platform for Long-Term Monitoring in Harsh Environments.

PubMed

Beddows, Patricia A; Mallon, Edward K

2018-02-09

A low-cost data logging platform is presented that provides long-term operation in remote or submerged environments. Three premade "breakout boards" from the open-source Arduino ecosystem are assembled into the core of the data logger. Power optimization techniques are presented which extend the operational life of this module-based design to >1 year on three alkaline AA batteries. Robust underwater housings are constructed for these loggers using PVC fittings. Both the logging platform and the enclosures, are easy to build and modify without specialized tools or a significant background in electronics. This combination turns the Cave Pearl data logger into a generalized prototyping system and this design flexibility is demonstrated with two field studies recording drip rates in a cave and water flow in a flooded cave system. This paper describes a complete DIY solution, suitable for a wide range of challenging deployment conditions.

Cave Pearl Data Logger: A Flexible Arduino-Based Logging Platform for Long-Term Monitoring in Harsh Environments

PubMed Central

Mallon, Edward K.

2018-01-01

A low-cost data logging platform is presented that provides long-term operation in remote or submerged environments. Three premade “breakout boards” from the open-source Arduino ecosystem are assembled into the core of the data logger. Power optimization techniques are presented which extend the operational life of this module-based design to >1 year on three alkaline AA batteries. Robust underwater housings are constructed for these loggers using PVC fittings. Both the logging platform and the enclosures, are easy to build and modify without specialized tools or a significant background in electronics. This combination turns the Cave Pearl data logger into a generalized prototyping system and this design flexibility is demonstrated with two field studies recording drip rates in a cave and water flow in a flooded cave system. This paper describes a complete DIY solution, suitable for a wide range of challenging deployment conditions. PMID:29425185

Optimal Configuration and Deployment of Software on Multi-Core Processing Architectures

DTIC Science & Technology

2008-07-01

between the event generating threads and the collector thread is implemented through semaphores . The Perseus data logger is designed to minimize the...performance counters (through the PAPI API) and opens up access to the shared memory logger through a semaphore and Remote Procedure Call (RPC) buffer... synchronization events. Using this rich data, the TMAM is able to output all of the information necessary to identify precisely which pairs of thread

Holocene sedimentary processes in the Gemlik Gulf: a transtensional basin on the middle Strand of the North Anatolian Fault, Sea of Marmara

NASA Astrophysics Data System (ADS)

Özmaral, A.; Çagatay, M. N.; Imren, C.; Gasperini, L.; Henry, P.

2012-04-01

Gemlik Gulf is an oval-shaped transtensional basin with a maximum depth of 113 m, located on the middle strand of the North Anatolian Fault (NAF) in the eastern part of the Sea of Marmara (SOM). During the last glacial period until the Holocene marine transgression about 12 ka BP, the sea level was below the Çanakkale (Dardanelles) Strait's bedrock sill depth of -85 m, and the Gemlik Basin became a lake isolated lake from the rest of the Sea of Marmara "Lake" and the global ocean. The high resolution seismic profiles and the multi- beam bathymetric map of the basin show that the basin is characterized by NW-SE trending transtensional oblique faults, delta lobes of the Büyükdere (Kocadere) to the east and an erosional surface below an up to 15 m-thick Holocene mud drape. The Holocene mud drape was studied in up to 9.5 m-long gravity-piston and 0.84 m-long sediment/water interface cores located at -105 to -113 m in the basin's depocentre. The Holocene mud consists mainly of plastic gray green marine clayey mud that includes thick-red brown clay layers and a laminated organic-rich, dark olive green sapropel in the lower part, which was previously dated at 11.6-6.4 14Ckyr (uncalib) BP. Multi-proxy analyses of the Holocene mud drape in the sediment cores were carried out using Multisensor Core Logger, XRF Core Scanner equipped with digital X-Ray radiography, and laser particle size analyzer. Seismic-core correlation was made using seismic data of the chirp profiles at the core locations and the synthetic seismograms generated using the MSCL P-wave velocity and gamma density measurements. The long piston-gravity cores include five 20 to 100 mm-thick "red brown mud layers" in the top 2.5 m of the core. These layers have a sharp basal boundary and gradational upper boundary. The red brown layers consist of 55-75% clay-size material with an average grain size of 3-4 µm, and have relatively a high magnetic susceptibility. They are enriched in K, Fe, Ti and Zr that are the proxy of detrital mineral input, and depleted in Ca, Br, Fe and Mn. Manganese shows a sharp enrichment immediately below the base of the red brown layers. All these features strongly suggest that the red layers represent the distal edges mass flow deposits, possibly sourced from the delta to the east. The distinct Mn enrichments below the base of the red brown layers represent the diagenetic enrichment at the oxic/anoxic boundary near the seafloor, which was later covered by the mass flow deposit. C-14 and radionuclide datings of the mass flow layers and investigation of their possible relation to the past earthquakes are under progress.

Dynamics of protein-protein interactions at the MscL periplasmic-lipid interface.

PubMed

Zhong, Dalian; Yang, Li-Min; Blount, Paul

2014-01-21

MscL, the highly conserved bacterial mechanosensitive channel of large conductance, is one of the best studied mechanosensors. It is a homopentameric channel that serves as a biological emergency release valve that prevents cell lysis from acute osmotic stress. We previously showed that the periplasmic region of the protein, particularly a single residue located at the TM1/periplasmic loop interface, F47 of Staphylococcus aureus and I49 of Escherichia coli MscL, plays a major role in both the open dwell time and mechanosensitivity of the channel. Here, we introduced cysteine mutations at these sites and found they formed disulfide bridges that decreased the channel open dwell time. By scanning a likely interacting domain, we also found that these sites could be disulfide trapped by addition of cysteine mutations in other locations within the periplasmic loop of MscL, and this also led to rapid channel kinetics. Together, the data suggest structural rearrangements and protein-protein interactions that occur within this region upon normal gating, and further suggest that locking portions of the channel into a transition state decreases the stability of the open state. Copyright © 2014 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Core Across the San Andreas Fault at SAFOD - Photographs, Physical Properties Data, and Core-Handling Procedures

NASA Astrophysics Data System (ADS)

Kirschner, D. L.; Carpenter, B.; Keenan, T.; Sandusky, E.; Sone, H.; Ellsworth, B.; Hickman, S.; Weiland, C.; Zoback, M.

2007-12-01

Core samples were obtained that cross three faults of the San Andreas Fault Zone north of Parkfield, California, during the summer of 2007. The cored intervals were obtained by sidetracking off the SAFOD Main Hole that was rotary drilled across the San Andreas in 2005. The first cored interval targeted the pronounced lithologic boundary between the Salinian terrane and the Great Valley and Franciscan formations. Eleven meters of pebbly conglomerate (with minor amounts of fine sands and shale) were obtained from 3141 to 3152 m (measured depth, MD). The two conglomerate units are heavily fractured with many fractures having accommodated displacement. Within this cored interval, there is a ~1m zone with highly sheared, fine-grained material, possibly ultracataclasite in part. The second cored interval crosses a creeping segment of a fault that has been deforming the cemented casing of the adjacent Main Hole. This cored interval sampled the fault 100 m above a seismogenic patch of M2 repeating earthquakes. Thirteen meters of core were obtained across this fault from 3186 to 3199 m (MD). This fault, which is hosted primarily in siltstones and shales, contains a serpentinite body embedded in a highly sheared shale and serpentinite-bearing fault gouge unit. The third cored interval crosses a second creeping fault that has also been deforming the cemented casing of the Main Hole. This fault, which is the most rapidly shearing fault in the San Andreas fault zone based on casing deformation, contains multiple fine- grained clay-rich fault strands embedded in highly sheared shales and lesser deformed sandstones. Initial processing of the cores was carried out at the drill site. Each core came to the surface in 9 meter-long aluminum core barrels. These were cut into more manageable three-foot sections. The quarter-inch-thick aluminum liner of each section was cut and then split apart to reveal the 10 cm diameter cores. Depending on the fragility and porosity of the rock, the drilling fluid was removed either by washing with dilute calcium chloride brine (to approximately match the salinity of the formation fluids) or by gently scraping away drilling mud on the core surface. Once cleaned, each core section was photographed to very high resolution on a Geotek Multi- Sensor Core Logging (MSCL) system. This system was also used to determine the bulk density and magnetic susceptibility of each section. The 25 MB high-resolution photographs and the raw and processed physical properties data were then uploaded to the ICDP web server in Potsdam for public access (http://safod.icdp- online.org). The cores will be archived at the Gulf Coast Repository of the Integrated Ocean Drilling Program in College Station, TX. The MSCL photographs, physical property measurements, and other related data, such as geophysical logs, will be integrated using CoreWall, and will be on display at the meeting. All samples, data, and imagery are available to the science community.

A Finite Element Framework for Studying the Mechanical Response of Macromolecules: Application to the Gating of the Mechanosensitive Channel MscL

PubMed Central

Tang, Yuye; Cao, Guoxin; Chen, Xi; Yoo, Jejoong; Yethiraj, Arun; Cui, Qiang

2006-01-01

The gating pathways of mechanosensitive channels of large conductance (MscL) in two bacteria (Mycobacterium tuberculosis and Escherichia coli) are studied using the finite element method. The phenomenological model treats transmembrane helices as elastic rods and the lipid membrane as an elastic sheet of finite thickness; the model is inspired by the crystal structure of MscL. The interactions between various continuum components are derived from molecular-mechanics energy calculations using the CHARMM all-atom force field. Both bacterial MscLs open fully upon in-plane tension in the membrane and the variation of pore diameter with membrane tension is found to be essentially linear. The estimated gating tension is close to the experimental value. The structural variations along the gating pathway are consistent with previous analyses based on structural models with experimental constraints and biased atomistic molecular-dynamics simulations. Upon membrane bending, neither MscL opens substantially, although there is notable and nonmonotonic variation in the pore radius. This emphasizes that the gating behavior of MscL depends critically on the form of the mechanical perturbation and reinforces the idea that the crucial gating parameter is lateral tension in the membrane rather than the curvature of the membrane. Compared to popular all-atom-based techniques such as targeted or steered molecular-dynamics simulations, the finite element method-based continuum-mechanics framework offers a unique alternative to bridge detailed intermolecular interactions and biological processes occurring at large spatial scales and long timescales. It is envisioned that such a hierarchical multiscale framework will find great value in the study of a variety of biological processes involving complex mechanical deformations such as muscle contraction and mechanotransduction. PMID:16731564

Electrostatics at the membrane define MscL channel mechanosensitivity and kinetics.

PubMed

Zhong, Dalian; Blount, Paul

2014-12-01

The bacterial mechanosensitive channel of large conductance (MscL) serves as a biological emergency release valve, preventing the occurrence of cell lysis caused by acute osmotic stress. Its tractable nature allows it to serve as a paradigm for how a protein can directly sense membrane tension. Although much is known of the importance of the hydrophobicity of specific residues in channel gating, it has remained unclear whether electrostatics at the membrane plays any role. We studied MscL chimeras derived from functionally distinct orthologues: Escherichia coli and Staphylococcus aureus. Dissection of one set led to an observation that changing the charge of a single residue, K101, of E. coli (Ec)-MscL, effects a channel phenotype: when mutated to a negative residue, the channel is less mechanosensitive and has longer open dwell times. Assuming electrostatic interactions, we determined whether they are due to protein-protein or protein-lipid interactions by performing site-directed mutagenesis elsewhere in the protein and reconstituting channels into defined lipids, with and without negative head groups. We found that although both interactions appear to play some role, the primary determinant of the channel phenotype seems to be protein-lipid electrostatics. The data suggest a model for the role of electrostatic interactions in the dynamics of MscL gating. © FASEB.

Confirming the Revised C-Terminal Domain of the MscL Crystal Structure

PubMed Central

Maurer, Joshua A.; Elmore, Donald E.; Clayton, Daniel; Xiong, Li; Lester, Henry A.; Dougherty, Dennis A.

2008-01-01

The structure of the C-terminal domain of the mechanosensitive channel of large conductance (MscL) has generated significant controversy. As a result, several structures have been proposed for this region: the original crystal structure (1MSL) of the Mycobacterium tuberculosis homolog (Tb), a model of the Escherichia coli homolog, and, most recently, a revised crystal structure of Tb-MscL (2OAR). To understand which of these structures represents a physiological conformation, we measured the impact of mutations to the C-terminal domain on the thermal stability of Tb-MscL using circular dichroism and performed molecular dynamics simulations of the original and the revised crystal structures of Tb-MscL. Our results imply that this region is helical and adopts an α-helical bundle conformation similar to that observed in the E. coli MscL model and the revised Tb-MscL crystal structure. PMID:18326638

Laguna Potrok Aike, Argentina: the first non-tropical environmental record in South America extending far beyond the Late-Glacial - a progress report

NASA Astrophysics Data System (ADS)

Zolitschka, B.; Anselmetti, F.; Ariztegui, D.; Corbella, H.; Francus, P.; Gebhardt, C.; Lücke, A.; Ohlendorf, C.; Schäbitz, F.; Pasado Science Team

2009-04-01

Within the framework of the ICDP-funded "Potrok Aike maar lake sediment archive drilling project" (PASADO) an international team of scientists carried out interdisciplinary research at the unique mid-Pleistocene (770 ka) maar lake of Laguna Potrok Aike in southern Patagonia (Province of Santa Cruz, Argentina). This lake is very sensitive to variations in southern hemispheric wind and pressure systems and thus holds a unique and continuous lacustrine record of climatic and ecological variability of global significance. Moreover, Southern Patagonia with its many active volcanoes is an ideal location to better understand the regional history of volcanism. These are two challenging geo-scientific themes that need to be tackled, especially as both of them have an increasing socio-economic relevance. Three months of drilling activities that finished last November 2008 were carried out by DOSECC from the drilling platform R/V "Kerry Kelts". More than 500 m of lacustrine sediments were recovered. This sedimentary archive will provide (1) new insights into the processes of regional back arc volcanism within the Pali Aike Volcanic Field itself as well as the more distant explosive volcanism of the Andean mountain chains; and, (2) high-resolution (decadal) quantitative climate and environmental reconstructions supported by multiple dating and stratigraphic correlations. Marine - ice core - terrestrial linkages will be emphasized as well as the incorporation of results from global climate modelling simulations for the last ca. 100 ka. The two drilled sites in the central deep basin of Laguna Potrok Aike have been selected based on four seismic surveys carried out between 2003 and 2005. Sediments were recovered at both drilled sites down to a subbottom depth of slightly more than 100 m using the GLAD800 drill rig with the hydraulic piston corer tool (HPC) at water depths varying between 95 and 100 m. The total core recovery is 94%. On-site core logging with the multi sensor core logger (MSCL) documents an excellent correlation between the four recovered holes drilled at Site 1 as well as with the three holes obtained from Site 2 which is located ca. 700 m south of Site 1. Additionally, a variety of sedimentological, physical and geochemical analyses were carried out on the core catcher samples in the field laboratory. Preliminary interpretation of all data that is available before core opening indicates that the record may go back in time as far as to the ending of oxygen isotope stage 5. Acknowledgements This research is supported by the International Continental Scientific Drilling Program (ICDP) in the framework of the "Potrok Aike Maar Lake Sediment Archive Drilling Project" (PASADO). Funding was provided by the ICDP, the German Science Foundation (DFG), the Swiss National Science Foundation (SNF), the Natural Sciences and Engineering Research Council of Canada (NSERC), the Swedish Vetenskapsradet (VR) and the University of Bremen.

Color reflectance spectroscopy of profundal lake sediments: a novel moisture-balance proxy for tropical East Africa

NASA Astrophysics Data System (ADS)

Meyer, Inka; Van Daele, Maarten; Fiers, Geraldine; Verleyen, Eli; De Batist, Marc; Verschuren, Dirk

2016-04-01

Investigations of the continuous sediment record from Lake Challa, a deep freshwater crater lake on the eastern slope of Mt. Kilimanjaro, are expanding our knowledge about past climate and environmental changes in equatorial East Africa. During a field campaign in 2005 a 20.65-m long composite sediment sequence was retrieved from the center of the lake, covering the past 25,000 years. Unlike many other East African lakes, Lake Challa never dried out during this period and therefore provides one of the few continuous and high-resolution regional climate-proxy records since before the LGM. Continuously taken digital line-scan images (GeoTek MSCL core logger) revealed systematic colour variation from greenish to yellow-brownish sediments throughout the core sequence. To characterize the origin of these colour variations, high-resolution colour reflectance spectrometry was carried out. The relative absorption band depth (RABD) at different wavelengths was calculated to distinguish between sediment components with distinct absorption/ reflection characteristics. RABD660/670 can be used as a proxy for chlorophyll and its derivates, and RABD610 as a proxy for carotenoids and their derivates. Comparison of RABD660/670 with independent reconstructions of rainfall (the Branched and Isoprenoid Tetraether (BIT) index of bacterial lipids) and seismic lake level reconstructions showed a positive correlation between these proxies. During times of wetter climate and higher lake level, e.g. the early Holocene, the RABD660/670 value is higher than during times of inferred dry conditions and low lake level, e.g. the early late-Glacial period (during which no chlorophyll or its derivates were detected). We attribute this positive correlation to reduced preservation of chlorophyll contained in the settling remains of dead phytoplankton during lowstands, when bottom waters may have been better oxygenated. This data is supported by the variation in fossil pigment concentration and composition analyzed by high performance liquid chromatography (HPLC). During humid/highstand episodes, chlorophyll and carotenoids are more diverse and abundant than during dry/lowstand episodes. Our data confirm the utility of reflectance spectroscopy as a tool for rapid, non-destructive and cost-effective analysis of long sequences of lithological change at high temporal resolution. They also support the previously published BIT-index record of Lake Challa as proxy for regional moisture-balance history.

Energetic and spatial parameters for gating of the bacterial large conductance mechanosensitive channel, MscL

NASA Technical Reports Server (NTRS)

Sukharev, S. I.; Sigurdson, W. J.; Kung, C.; Sachs, F.

1999-01-01

MscL is multimeric protein that forms a large conductance mechanosensitive channel in the inner membrane of Escherichia coli. Since MscL is gated by tension transmitted through the lipid bilayer, we have been able to measure its gating parameters as a function of absolute tension. Using purified MscL reconstituted in liposomes, we recorded single channel currents and varied the pressure gradient (P) to vary the tension (T). The tension was calculated from P and the radius of curvature was obtained using video microscopy of the patch. The probability of being open (Po) has a steep sigmoidal dependence on T, with a midpoint (T1/2) of 11.8 dyn/cm. The maximal slope sensitivity of Po/Pc was 0.63 dyn/cm per e-fold. Assuming a Boltzmann distribution, the energy difference between the closed and fully open states in the unstressed membrane was DeltaE = 18.6 kBT. If the mechanosensitivity arises from tension acting on a change of in-plane area (DeltaA), the free energy, TDeltaA, would correspond to DeltaA = 6.5 nm2. MscL is not a binary channel, but has four conducting states and a closed state. Most transition rates are independent of tension, but the rate-limiting step to opening is the transition between the closed state and the lowest conductance substate. This transition thus involves the greatest DeltaA. When summed over all transitions, the in-plane area change from closed to fully open was 6 nm2, agreeing with the value obtained in the two-state analysis. Assuming a cylindrical channel, the dimensions of the (fully open) pore were comparable to DeltaA. Thus, the tension dependence of channel gating is primarily one of increasing the external channel area to accommodate the pore of the smallest conducting state. The higher conducting states appear to involve conformational changes internal to the channel that don't involve changes in area.

S. aureus MscL is a pentamer in vivo but of variable stoichiometries in vitro: implications for detergent-solubilized membrane proteins.

PubMed

Dorwart, Michael R; Wray, Robin; Brautigam, Chad A; Jiang, Youxing; Blount, Paul

2010-12-07

While the bacterial mechanosensitive channel of large conductance (MscL) is the best studied biological mechanosensor and serves as a paradigm for how a protein can sense and respond to membrane tension, the simple matter of its oligomeric state has led to debate, with models ranging from tetramers to hexamers. Indeed, two different oligomeric states of the bacterial mechanosensitive channel MscL have been resolved by X-ray crystallography: The M. tuberculosis channel (MtMscL) is a pentamer, while the S. aureus protein (SaMscL) forms a tetramer. Because several studies suggest that, like MtMscL, the E. coli MscL (EcoMscL) is a pentamer, we re-investigated the oligomeric state of SaMscL. To determine the structural organization of MscL in the cell membrane we developed a disulfide-trapping approach. Surprisingly, we found that virtually all SaMscL channels in vivo are pentameric, indicating this as the physiologically relevant and functional oligomeric state. Complementing our in vivo results, we purified SaMscL and assessed its oligomeric state using three independent approaches (sedimentation equilibrium centrifugation, crosslinking, and light scattering) and established that SaMscL is a pentamer when solubilized in Triton X-100 and C(8)E(5) detergents. However, performing similar experiments on SaMscL solubilized in LDAO, the detergent used in the crystallographic study, confirmed the tetrameric oligomerization resolved by X-ray crystallography. We further demonstrate that this stoichiometric shift is reversible by conventional detergent exchange experiments. Our results firmly establish the pentameric organization of SaMscL in vivo. Furthermore they demonstrate that detergents can alter the subunit stoichiometry of membrane protein complexes in vitro; thus, in vivo assays are necessary to firmly establish a membrane protein's true functionally relevant oligomeric state.

Activation of the mechanosensitive ion channel MscL by mechanical stimulation of supported Droplet-Hydrogel bilayers

PubMed Central

Rosholm, Kadla R.; Baker, Matthew A. B.; Ridone, Pietro; Nakayama, Yoshitaka; Rohde, Paul R.; Cuello, Luis G.; Lee, Lawrence K.; Martinac, Boris

2017-01-01

The droplet on hydrogel bilayer (DHB) is a novel platform for investigating the function of ion channels. Advantages of this setup include tight control of all bilayer components, which is compelling for the investigation of mechanosensitive (MS) ion channels, since they are highly sensitive to their lipid environment. However, the activation of MS ion channels in planar supported lipid bilayers, such as the DHB, has not yet been established. Here we present the activation of the large conductance MS channel of E. coli, (MscL), in DHBs. By selectively stretching the droplet monolayer with nanolitre injections of buffer, we induced quantifiable DHB tension, which could be related to channel activity. The MscL activity response revealed that the droplet monolayer tension equilibrated over time, likely by insertion of lipid from solution. Our study thus establishes a method to controllably activate MS channels in DHBs and thereby advances studies of MS channels in this novel platform. PMID:28345591

Subdivision of Holocene Baltic sea sediments by their physical properties [Gliederung holozaner ostseesedimente nach physikalischen Eigenschaften

USGS Publications Warehouse

Harff, Jan; Bohling, Geoffrey C.; Endler, R.; Davis, J.C.; Olea, R.A.

1999-01-01

The Holocene sediment sequence of a core taken within the centre of the Eastern Gotland Basin was subdivided into 12 lithostratigraphic units based on MSCL-data (sound velocity, wet bulk density, magnetic susceptibility) using a multivariate classification method. The lower 6 units embrace the sediments until the Litorina transgression, and the upper 6 units subdivide the brackish-marine Litorina- and post-Litorina sediments. The upper lithostratigraphic units reflect a change of anoxic (laminated) and oxic (non-laminated) sediments. By application of a numerical stratigraphic correlation method the zonation was extended laterally onto contiguous sediment cores within the central basin. Consequently the change of anoxic and oxic sediments can be used for a general lithostratigraphic subdivision of sediments of the Gotland Basin. A quantitative criterion based on the sediment-physical lithofacies is added to existing subdivisions of the Holocene in the Baltic Sea.

Flying-patch patch-clamp study of G22E-MscL mutant under high hydrostatic pressure.

PubMed

Petrov, Evgeny; Rohde, Paul R; Martinac, Boris

2011-04-06

High hydrostatic pressure (HHP) present in natural environments impacts on cell membrane biophysical properties and protein quaternary structure. We have investigated the effect of high hydrostatic pressure on G22E-MscL, a spontaneously opening mutant of Escherichia coli MscL, the bacterial mechanosensitive channel of large conductance. Patch-clamp technique combined with a flying-patch device and hydraulic setup allowed the study of the effects of HHP up to 90 MPa (as near the bottom of the Marianas Trench) on the MscL mutant channel reconstituted into liposome membranes, in addition to recording in situ from the mutant channels expressed in E. coli giant spheroplasts. In general, against thermodynamic predictions, hydrostatic pressure in the range of 0.1-90 MPa increased channel open probability by favoring the open state of the channel. Furthermore, hydrostatic pressure affected the channel kinetics, as manifested by the propensity of the channel to gate at subconducting levels with an increase in pressure. We propose that the presence of water molecules around the hydrophobic gate of the G22E MscL channel induce hydration of the hydrophobic lock under HHP causing frequent channel openings and preventing the channel closure in the absence of membrane tension. Furthermore, our study indicates that HHP can be used as a valuable experimental approach toward better understanding of the gating mechanism in complex channels such as MscL. Copyright © 2011 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Shipboard Analytical Capabilities on the Renovated JOIDES Resolution, IODP Riserless Drilling Vessel

NASA Astrophysics Data System (ADS)

Blum, P.; Foster, P.; Houpt, D.; Bennight, C.; Brandt, L.; Cobine, T.; Crawford, W.; Fackler, D.; Fujine, K.; Hastedt, M.; Hornbacher, D.; Mateo, Z.; Moortgat, E.; Vasilyev, M.; Vasilyeva, Y.; Zeliadt, S.; Zhao, J.

2008-12-01

The JOIDES Resolution (JR) has conducted 121 scientific drilling expeditions during the Ocean Drilling Program (ODP) and the first phase of the Integrated Ocean Drilling Program (IODP) (1983-2006). The vessel and scientific systems have just completed an NSF-sponsored renovation (2005-2008). Shipboard analytical systems have been upgraded, within funding constraints imposed by market driven vessel conversion cost increases, to include: (1) enhanced shipboard analytical services including instruments and software for sampling and the capture of chemistry, physical properties, and geological data; (2) new data management capabilities built around a laboratory information management system (LIMS), digital asset management system, and web services; (3) operations data services with enhanced access to navigation and rig instrumentation data; and (4) a combination of commercial and home-made user applications for workflow- specific data extractions, generic and customized data reporting, and data visualization within a shipboard production environment. The instrumented data capture systems include a new set of core loggers for rapid and non-destructive acquisition of images and other physical properties data from drill cores. Line-scan imaging and natural gamma ray loggers capture data at unprecedented quality due to new and innovative designs. Many instruments used to characterize chemical compounds of rocks, sediments, and interstitial fluids were upgraded with the latest technology. The shipboard analytical environment features a new and innovative framework (DESCinfo) and application (DESClogik) for capturing descriptive and interpretive data from geological sub-domains such as sedimentology, petrology, paleontology, structural geology, stratigraphy, etc. This system fills a long-standing gap by providing a global database, controlled vocabularies and taxa name lists with version control, a highly configurable spreadsheet environment for data capture, and visualization of context data collected with the shipboard core loggers and other instruments.

The gating mechanism of the large mechanosensitive channel MscL

NASA Technical Reports Server (NTRS)

Sukharev, S.; Betanzos, M.; Chiang, C. S.; Guy, H. R.

2001-01-01

The mechanosensitive channel of large conductance, MscL, is a ubiquitous membrane-embedded valve involved in turgor regulation in bacteria. The crystal structure of MscL from Mycobacterium tuberculosis provides a starting point for analysing molecular mechanisms of tension-dependent channel gating. Here we develop structural models in which a cytoplasmic gate is formed by a bundle of five amino-terminal helices (S1), previously unresolved in the crystal structure. When membrane tension is applied, the transmembrane barrel expands and pulls the gate apart through the S1-M1 linker. We tested these models by substituting cysteines for residues predicted to be near each other only in either the closed or open conformation. Our results demonstrate that S1 segments form the bundle when the channel is closed, and crosslinking between S1 segments prevents opening. S1 segments interact with M2 when the channel is open, and crosslinking of S1 to M2 impedes channel closing. Gating is affected by the length of the S1-M1 linker in a manner consistent with the model, revealing critical spatial relationships between the domains that transmit force from the lipid bilayer to the channel gate.

An in vivo screen reveals protein-lipid interactions crucial for gating a mechanosensitive channel

PubMed Central

Iscla, Irene; Wray, Robin; Blount, Paul

2011-01-01

The bacterial mechanosensitive channel MscL is the best-studied mechanosensor, thus serving as a paradigm of how a protein senses and responds to mechanical force. Models for the transition of Escherichia coli MscL from closed to open states propose a tilting of the transmembrane domains in the plane of the membrane, suggesting dynamic protein-lipid interactions. Here, we used a rapid in vivo assay to assess the function of channels that were post-translationally modified at several different sites in a region just distal to the cytoplasmic end of the second transmembrane helix. We utilized multiple probes with various affinities for the membrane environment. The in vivo functional data, combined with site-directed mutagenesis, single-channel analyses, and tryptophan fluorescence measurements, confirmed that lipid interactions within this region are critical for MscL gating. The data suggest a model in which this region acts as an anchor for the transmembrane domain tilting during gating. Furthermore, the conservation of analogous motifs among many other channels suggests a conserved protein-lipid dynamic mechanism.—Iscla, I., Wray, R., Blount, P. An in vivo screen reveals protein-lipid interactions crucial for gating a mechanosensitive channel. PMID:21068398

Structural models of the MscL gating mechanism

NASA Technical Reports Server (NTRS)

Sukharev, S.; Durell, S. R.; Guy, H. R.

2001-01-01

Three-dimensional structural models of the mechanosensitive channel of large conductance, MscL, from the bacteria Mycobacterium tuberculosis and Escherichia coli were developed for closed, intermediate, and open conformations. The modeling began with the crystal structure of M. tuberculosis MscL, a homopentamer with two transmembrane alpha-helices, M1 and M2, per subunit. The first 12 N-terminal residues, not resolved in the crystal structure, were modeled as an amphipathic alpha-helix, called S1. A bundle of five parallel S1 helices are postulated to form a cytoplasmic gate. As membrane tension induces expansion, the tilts of M1 and M2 are postulated to increase as they move away from the axis of the pore. Substantial expansion is postulated to occur before the increased stress in the S1 to M1 linkers pulls the S1 bundle apart. During the opening transition, the S1 helices and C-terminus amphipathic alpha-helices, S3, are postulated to dock parallel to the membrane surface on the perimeter of the complex. The proposed gating mechanism reveals critical spatial relationships between the expandable transmembrane barrel formed by M1 and M2, the gate formed by S1 helices, and "strings" that link S1s to M1s. These models are consistent with numerous experimental results and modeling criteria.

Site-Directed Spin-Labeling Analysis of Reconstituted Mscl in the Closed State

PubMed Central

Perozo, Eduardo; Kloda, Anna; Cortes, D. Marien; Martinac, Boris

2001-01-01

The mechanosensitive channel from Escherichia coli (Eco-MscL) responds to membrane lateral tension by opening a large, water-filled pore that serves as an osmotic safety valve. In an attempt to understand the structural dynamics of MscL in the closed state and under physiological conditions, we have performed a systematic site-directed spin labeling study of this channel reconstituted in a membrane bilayer. Structural information was derived from an analysis of probe mobility, residue accessibility to O2 or NiEdda and overall intersubunit proximity. For the majority of the residues studied, mobility and accessibility data showed a remarkable agreement with the Mycobacterium tuberculosis crystal structure, clearly identifying residues facing the large water-filled vestibule at the extracellular face of the molecule, the narrowest point along the permeation pathway (residues 21–26 of Eco-MscL), and the lipid-exposed residues in the peripheral transmembrane segments (TM2). Overall, the present dataset demonstrates that the transmembrane regions of the MscL crystal structure (obtained in detergent and at low pH) are, in general, an accurate representation of its structure in a membrane bilayer under physiological conditions. However, significant differences between the EPR data and the crystal structure were found toward the COOH-terminal end of TM2. PMID:11479346

Waterfall notch-filtering for restoration of acoustic backscatter records from Admiralty Bay, Antarctica

NASA Astrophysics Data System (ADS)

Fonseca, Luciano; Hung, Edson Mintsu; Neto, Arthur Ayres; Magrani, Fábio José Guedes

2018-06-01

A series of multibeam sonar surveys were conducted from 2009 to 2013 around Admiralty Bay, Shetland Islands, Antarctica. These surveys provided a detailed bathymetric model that helped understand and characterize the bottom geology of this remote area. Unfortunately, the acoustic backscatter records registered during these bathymetric surveys were heavily contaminated with noise and motion artifacts. These artifacts persisted in the backscatter records despite the fact that the proper acquisition geometry and the necessary offsets and delays were applied during the survey and in post-processing. These noisy backscatter records were very difficult to interpret and to correlate with gravity-core samples acquired in the same area. In order to address this issue, a directional notch-filter was applied to the backscatter waterfall in the along-track direction. The proposed filter provided better estimates for the backscatter strength of each sample by considerably reducing residual motion artifacts. The restoration of individual samples was possible since the waterfall frame of reference preserves the acquisition geometry. Then, a remote seafloor characterization procedure based on an acoustic model inversion was applied to the restored backscatter samples, generating remote estimates of acoustic impedance. These remote estimates were compared to Multi Sensor Core Logger measurements of acoustic impedance obtained from gravity core samples. The remote estimates and the Core Logger measurements of acoustic impedance were comparable when the shallow seafloor was homogeneous. The proposed waterfall notch-filtering approach can be applied to any sonar record, provided that we know the system ping-rate and sampling frequency.

How do different data logger sizes and attachment positions affect the diving behaviour of little penguins?

NASA Astrophysics Data System (ADS)

Ropert-Coudert, Yan; Knott, Nathan; Chiaradia, André; Kato, Akiko

2007-02-01

It is crucial in any bio-logging study to establish the potential effect that attachment of loggers may have on the animal. This ensures that the behaviour monitored by the loggers has a biological relevance, as well as for ethical reasons. Evaluation of the effects of externally attached loggers shows that they increase the drag of swimming animals and increase their energy expenditure. Nevertheless, little research has been done on the effects of size or position of such loggers. In this study, we tested whether the size (i.e. large: 4.9% versus small: 3.4% of the bird's frontal area) or the place of attachment (middle versus lower back) affected the diving behaviour of male and female little penguins ( Eudyptula minor). The positioning of the data logger on the middle or lower section of little penguins' back had little, if no effect, on the diving variables measured in this study. Size of the loggers, however, had strong effects. Birds with large loggers made shorter dives and reached shallower depths than those with small loggers. In addition, birds with large loggers made more dives probably to compensate for the extra cost of carrying a large logger. The measured variables also differed between the sexes, with males diving deeper and longer than females. Logger size had a sex-specific effect on the trip duration and descent speed, with males equipped with large loggers staying longer at sea than those with small loggers, and females with large loggers descending faster than those with small loggers. From our results, it appears that effects of logger position do not exist or are very small in comparison with the effects of logger size. The results of the current study indicate that the effects of size of loggers be evaluated more commonly in bio-logging research into the diving activity of free-ranging birds.

Thermophysical properties derived from lab measurements and downhole logging at New Jersey Shallow Shelf (IODP Expedition 313)

NASA Astrophysics Data System (ADS)

Fehr, A.; Pechnig, R.; Inwood, J.; Lofi, J.; Bosch, F. P.; Clauser, C.

2012-04-01

The IODP drilling expedition 313 New Jersey Shallow Shelf was proposed for obtaining deep sub-seafloor samples and downhole logging measurements in the crucial inner shelf region. The inner to central shelf off-shore New Jersey is an ideal location for studying the history of sea-level changes and its relationship to sequence stratigraphy and onshore/offshore groundwater flows. The region features rapid depositional rates, tectonic stability, and well-preserved, cosmopolitan age control fossils suitable for characterizing the sediments of this margin throughout the time interval of interest. Past sea-level rise and fall is documented in sedimentary layers deposited during Earth's history. In addition, the inner shelf is characterised by relatively fresh pore water intervals alternating vertically with saltier intervals (Mountain et al., 2010). Therefore, three boreholes were drilled in the so-called New Jersey/Mid-Atlantic transect during IODP Expedition 313 New Jersey Shallow Shelf. Numerous questions have arisen concerning the age and origin of the brackish waters recovered offshore at depth. Here we present an analysis of thermophysical properties to be used as input parameters in constructing numerical models for future groundwater flow simulations. Our study is based mainly on Nuclear Magnetic Resonance (NMR) measurements for inferring porosity and permeability, and thermal conductivity. We performed NMR measurements on samples from boreholes M0027A, M0028A and M0029A and thermal conductivity measurements on the whole round cores prior to the Onshore Party. These results are compared with data from alternative laboratory measurements and with petrophysical properties inferred from downhole logging data. We deduced petrophysical properties from downhole logging data and compared them with results obtained with laboratory measurements. In water saturated samples, the number of spins in the fluid is proportional to sample porosity. NMR porosities were calculated from the zero amplitudes of the transverse relaxation measurements by normalizing the CPMG (Carr, Purcell, Meiboom, Gill) amplitudes of the measured samples to the amplitudes measured on a pure water cylinder which is equivalent to a porosity of 100 %. The NMR porosities fit well with porosities determined by Multi Sensor Core Logger (MSCL) and porosity measured on discrete samples using a helium gas pycnometer. Using log interpretation procedures, the volume fraction of different rock types and their porosity can be derived. From the volume fraction of each rock type and its porosity, continuous profiles of thermal conductivity can be derived by using a suitable mixing law, e.g. such as the geometric mean. In combination with thermal conductivity measurements on cores, these continuous thermal conductivity profiles can be calibrated, validated and finally used to provide reliable input parameter for numerical models. The porosity values from NMR seem to correlate well with porosities deduced from other measurements. In order to compare NMR permeabilities, we need permeability determined by an alternative method. The thermal conductivity derived from logs correlates with the measurements performed on cores. In a next step, a numerical model will be set up and the measured thermophysical properties will be implemented in order to study transport processes in passive continental margins. This numerical model will be based on existing geological models deduced from seismic data and drillings.

Helicity, membrane incorporation, orientation and thermal stability of the large conductance mechanosensitive ion channel from E. coli

NASA Technical Reports Server (NTRS)

Arkin, I. T.; Sukharev, S. I.; Blount, P.; Kung, C.; Brunger, A. T.

1998-01-01

In this report, we present structural studies on the large conductance mechanosensitive ion channel (MscL) from E. coli in detergent micelles and lipid vesicles. Both transmission Fourier transform infrared spectroscopy and circular dichroism (CD) spectra indicate that the protein is highly helical in detergents as well as liposomes. The secondary structure of the proteins was shown to be highly resistant towards denaturation (25-95 degrees C) based on an ellipticity thermal profile. Amide H+/D+ exchange was shown to be extensive (ca. 66%), implying that two thirds of the protein are water accessible. MscL, reconstituted in oriented lipid bilayers, was shown to possess a net bilayer orientation using dichroic ratios measured by attenuated total-reflection Fourier transform infrared spectroscopy. Here, we present and discuss this initial set of structural data on this new family of ion-channel proteins.

High resolution remanent magnetization scanner for long cores

NASA Astrophysics Data System (ADS)

Demory, François; Quesnel, Yoann; Uehara, Minoru; Rochette, Pierre; Zylberman, William; Romey, Carole; Pignol, Laure; Andrieu-Ponel, Valérie

2017-04-01

Superconducting rock magnetometer reaches saturation when measuring magnetic moments higher than 5 10-5 Am2. Due to the distance of the sensor from the measurement zone, the spatial resolution is low for continuous measurements led on U channel or cores. To solve these problems, we designed a core logger dedicated to the measurement of remanent magnetizations. Based on a fluxgate sensor located very close to the sample, the spatial resolution of the core logger is infra-centimetric. The fluxgate sensor is also able to detect magnetic fields of few nT produced by magnetic moments of the order of few 10-8 Am2. As the equipment does not reach saturation, we measured isothermal remanent magnetization of highly magnetic samples. This magnetization was acquired perpendicularly to the long axis of U-channels from Cassis paleo-lake (Romey et al., 2015) and of cores from Haughton impact structure (Zylberman et al., submitted) using Halbach cylinders (Rochette et al., 2001). To interpret local magnetic fields in terms of magnetic moments, we performed an inter-calibration with the superconducting rock magnetometer and signal inversion. This development led to the filing of a patent (FR.16/53142) and is funded by the ECCOREV project MESENVIMAG. References: Rochette, P., Vadeboin, F., Clochard, L., 2001. Rock magnetic applications of Halbach cylinders. Physics of the Earth and Planetary Interiors 126, 109-117. Romey, C., Vella, C., Rochette, P., Andrieu-Ponel, V., Magnin, F., Veron, A., Talon, B., Landure, C., D'Ovidio, A.M., Delanghe, D., Ghilardi, M., Angeletti, B., 2015. Environmental imprints of landscape evolution and human activities during the Holocene in a small catchment of the Calanques Massif (Cassis, southern France). Holocene 25 (9), 1454-1469. Zylberman W., Quesnel Y., Rochette P., Osinski G. R., Marion C., Gattacceca J. (submitted to MAPS) Hydrothermally-enhanced magnetization at the center of the Haughton impact structure? (Nunavut, Canada).

Reviews Equipment: Data logger Book: Imagined Worlds Equipment: Mini data loggers Equipment: PICAXE-18M2 data logger Books: Engineering: A Very Short Introduction and To Engineer Is Human Book: Soap, Science, & Flat-Screen TVs Equipment: uLog and SensorLab Web Watch

NASA Astrophysics Data System (ADS)

2012-07-01

WE RECOMMEND Data logger Fourier NOVA LINK: data logging and analysis To Engineer is Human Engineering: essays and insights Soap, Science, & Flat-Screen TVs People, politics, business and science overlap uLog sensors and sensor adapter A new addition to the LogIT range offers simplicity and ease of use WORTH A LOOK Imagined Worlds Socio-scientific predictions for the future Mini light data logger and mini temperature data logger Small-scale equipment for schools SensorLab Plus LogIT's supporting software, with extra features HANDLE WITH CARE CAXE110P PICAXE-18M2 data logger Data logger 'on view' but disappoints Engineering: A Very Short Introduction A broad-brush treatment fails to satisfy WEB WATCH Two very different websites for students: advanced physics questions answered and a more general BBC science resource

Information needs for increasing log transport efficiency

Treesearch

Timothy P. McDonald; Steven E. Taylor; Robert B. Rummer; Jorge Valenzuela

2001-01-01

Three methods of dispatching trucks to loggers were tested using a log transport simulation model: random allocation, fixed assignment of trucks to loggers, and dispatch based on knowledge of the current status of trucks and loggers within the system. This 'informed' dispatch algorithm attempted to minimize the difference in time between when a logger would...

Microchip transponder thermometry for monitoring core body temperature of antelope during capture.

PubMed

Rey, Benjamin; Fuller, Andrea; Hetem, Robyn S; Lease, Hilary M; Mitchell, Duncan; Meyer, Leith C R

2016-01-01

Hyperthermia is described as the major cause of morbidity and mortality associated with capture, immobilization and restraint of wild animals. Therefore, accurately determining the core body temperature of wild animals during capture is crucial for monitoring hyperthermia and the efficacy of cooling procedures. We investigated if microchip thermometry can accurately reflect core body temperature changes during capture and cooling interventions in the springbok (Antidorcas marsupialis), a medium-sized antelope. Subcutaneous temperature measured with a temperature-sensitive microchip was a weak predictor of core body temperature measured by temperature-sensitive data loggers in the abdominal cavity (R(2)=0.32, bias >2 °C). Temperature-sensitive microchips in the gluteus muscle, however, provided an accurate estimate of core body temperature (R(2)=0.76, bias=0.012 °C). Microchips inserted into muscle therefore provide a convenient and accurate method to measure body temperature continuously in captured antelope, allowing detection of hyperthermia and the efficacy of cooling procedures. Copyright © 2015 Elsevier Ltd. All rights reserved.

Evaluating Continuing Education Needs and Program Effectiveness Using a Survey of Virginia's SHARP Logger Program Participants

ERIC Educational Resources Information Center

Barrett, Scott M.; Bolding, M. Chad; Munsell, John F.

2012-01-01

Virginia's SHARP logger program is a Cooperative Extension program currently providing training to over 1,500 loggers, foresters, and others. We conducted a mail survey of SHARP loggers to characterize program participants, assess programming needs, and evaluate program effectiveness. Results indicate a diverse group of participants in terms of…

Fuel supply structure of wood-fired power plants in the Northeast: Loggers' perspectives

Treesearch

Neil K. Huyler; Neil K. Huyler

1989-01-01

A study of loggers' perceptions of the impact of large biomass demand centers on the forest resource base in the Northeast indicated that most loggers strongly believe that the post-harvest stand has improved. However, the impact of whole-tree chipping on the forest resource base was not made clear from the loggers' survey.

Calibration of a modified temperature-light intensity logger for quantifying water electrical conductivity

NASA Astrophysics Data System (ADS)

Gillman, M. A.; Lamoureux, S. F.; Lafrenière, M. J.

2017-09-01

The Stream Temperature, Intermittency, and Conductivity (STIC) electrical conductivity (EC) logger as presented by Chapin et al. (2014) serves as an inexpensive (˜50 USD) means to assess relative EC in freshwater environments. This communication demonstrates the calibration of the STIC logger for quantifying EC, and provides examples from a month long field deployment in the High Arctic. Calibration models followed multiple nonlinear regression and produced calibration curves with high coefficient of determination values (R2 = 0.995 - 0.998; n = 5). Percent error of mean predicted specific conductance at 25°C (SpC) to known SpC ranged in magnitude from -0.6% to 13% (mean = -1.4%), and mean absolute percent error (MAPE) ranged from 2.1% to 13% (mean = 5.3%). Across all tested loggers we found good accuracy and precision, with both error metrics increasing with increasing SpC values. During 10, month-long field deployments, there were no logger failures and full data recovery was achieved. Point SpC measurements at the location of STIC loggers recorded via a more expensive commercial electrical conductivity logger followed similar trends to STIC SpC records, with 1:1.05 and 1:1.08 relationships between the STIC and commercial logger SpC values. These results demonstrate that STIC loggers calibrated to quantify EC are an economical means to increase the spatiotemporal resolution of water quality investigations.

High-resolution gamma ray attenuation density measurements on mining exploration drill cores, including cut cores

NASA Astrophysics Data System (ADS)

Ross, P.-S.; Bourke, A.

2017-01-01

Physical property measurements are increasingly important in mining exploration. For density determinations on rocks, one method applicable on exploration drill cores relies on gamma ray attenuation. This non-destructive method is ideal because each measurement takes only 10 s, making it suitable for high-resolution logging. However calibration has been problematic. In this paper we present new empirical, site-specific correction equations for whole NQ and BQ cores. The corrections force back the gamma densities to the "true" values established by the immersion method. For the NQ core caliber, the density range extends to high values (massive pyrite, 5 g/cm3) and the correction is thought to be very robust. We also present additional empirical correction factors for cut cores which take into account the missing material. These "cut core correction factors", which are not site-specific, were established by making gamma density measurements on truncated aluminum cylinders of various residual thicknesses. Finally we show two examples of application for the Abitibi Greenstone Belt in Canada. The gamma ray attenuation measurement system is part of a multi-sensor core logger which also determines magnetic susceptibility, geochemistry and mineralogy on rock cores, and performs line-scan imaging.

The NetLogger Toolkit V2.0

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gunter, Dan; Lee, Jason; Stoufer, Martin

2003-03-28

The NetLogger Toolkit is designed to monitor, under actual operating conditions, the behavior of all the elements of the application-to-application communication path in order to determine exactly where time is spent within a complex system Using NetLogger, distnbuted application components are modified to produce timestamped logs of "interesting" events at all the critical points of the distributed system Events from each component are correlated, which allov^ one to characterize the performance of all aspects of the system and network in detail. The NetLogger Toolkit itself consists of four components an API and library of functions to simplify the generation ofmore » application-level event logs, a set of tools for collecting and sorting log files, an event archive system, and a tool for visualization and analysis of the log files In order to instrument an application to produce event logs, the application developer inserts calls to the NetLogger API at all the critical points in the code, then links the application with the NetLogger library All the tools in the NetLogger Toolkit share a common log format, and assume the existence of accurate and synchronized system clocks NetLogger messages can be logged using an easy-to-read text based format based on the lETF-proposed ULM format, or a binary format that can still be used through the same API but that is several times faster and smaller, with performance comparable or better than binary message formats such as MPI, XDR, SDDF-Binary, and PBIO. The NetLogger binary format is both highly efficient and self-describing, thus optimized for the dynamic message construction and parsing of application instrumentation. NetLogger includes an "activation" API that allows NetLogger logging to be turned on, off, or modified by changing an external file This IS useful for activating logging in daemons/services (e g GndFTP server). The NetLogger reliability API provides the ability to specify backup logging locations and penodically try to reconnect broken TCP pipe. A typical use for this is to store data on local disk while net is down. An event archiver can log one or more incoming NetLogger streams to a local disk file (netlogd) or to a mySQL database (netarchd). We have found exploratory, visual analysis of the log event data to be the most useful means of determining the causes of performance anomalies The NetLogger Visualization tool, niv, has been developed to provide a flexible and interactive graphical representation of system-level and application-level events.« less

Evaluating the Impact of Handling and Logger Attachment on Foraging Parameters and Physiology in Southern Rockhopper Penguins

PubMed Central

Ludynia, Katrin; Dehnhard, Nina; Poisbleau, Maud; Demongin, Laurent; Masello, Juan F.; Quillfeldt, Petra

2012-01-01

Logger technology has revolutionised our knowledge of the behaviour and physiology of free-living animals but handling and logger attachments may have negative effects on the behaviour of the animals and their welfare. We studied southern rockhopper penguin (Eudyptes chrysocome) females during the guard stage in three consecutive breeding seasons (2008/09−2010/11) to evaluate the effects of handling and logger attachment on foraging trip duration, dive behaviour and physiological parameters. Smaller dive loggers (TDRs) were used in 2010/11 for comparison to larger GPS data loggers used in all three seasons and we included two categories of control birds: handled controls and PIT control birds that were previously marked with passive integrative transponders (PITs), but which had not been handled during this study. Increased foraging trip duration was only observed in GPS birds during 2010/11, the breeding season in which we also found GPS birds foraging further away from the colony and travelling longer distances. Compared to previous breeding seasons, 2010/11 may have been a period with less favourable environmental conditions, which would enhance the impact of logger attachments. A comparison between GPS and TDR birds showed a significant difference in dive depth frequencies with birds carrying larger GPS data loggers diving shallower. Mean and maximum dive depths were similar between GPS and TDR birds. We measured little impact of logger attachments on physiological parameters (corticosterone, protein, triglyceride levels and leucocyte counts). Overall, handling and short-term logger attachments (1–3 days) showed limited impact on the behaviour and physiology of the birds but care must be taken with the size of data loggers on diving seabirds. Increased drag may alter their diving behaviour substantially, thus constraining them in their ability to catch prey. Results obtained in this study indicate that data recorded may also not represent their normal dive behaviour. PMID:23185623

The design of a microprocessor-based data logger

USGS Publications Warehouse

Leap, K.J.; Dedini, L.A.

1982-01-01

The design of a microprocessor-based data logger, which collects and digitizes analog voltage signals from a continuous-measuring instrumentation system and transmits serial data to a magnetic tape recorder, is discussed. The data logger was assembled from commercially-available components and can be user-programmed for greater flexibility. A description of the data logger hardware and software designs, general operating instructions, the microprocessor program listing, and electrical schematic diagrams are presented.

Brünnich's guillemots (Uria lomvia) maintain high temperature in the body core during dives.

PubMed

Niizuma, Yasuaki; Gabrielsen, Geir W; Sato, Katsufumi; Watanuki, Yutaka; Naito, Yasuhiko

2007-06-01

A major challenge for diving birds, reptiles, and mammals is regulating body temperature while conserving oxygen through a reduction in metabolic processes. To gain insight into how these needs are met, we measured dive depth and body temperatures at the core or periphery between the skin and abdominal muscles simultaneously in freely diving Brünnich's guillemots (Uria lomvia), an arctic seabird, using an implantable data logger (16-mm diameter, 50-mm length, 14-g mass, Little Leonardo Ltd., Tokyo). Guillemots exhibited increased body core temperatures, but decreased peripheral temperatures, during diving. Heat conservation within the body core appeared to result from the combined effect of peripheral vasoconstriction and a high wing beat frequency that generates heat. Conversely, the observed tissue hypothermia in the periphery should reduce metabolic processes as well as heat loss to the water. These physiological effects are likely one of the key physiological adaptations that makes guillemots to perform as an efficient predator in arctic waters.

Recruitment, Methods, and Descriptive Results of a Physiologic Assessment of Latino Farmworkers: The California Heat Illness Prevention Study.

PubMed

Mitchell, Diane C; Castro, Javier; Armitage, Tracey L; Vega-Arroyo, Alondra J; Moyce, Sally C; Tancredi, Daniel J; Bennett, Deborah H; Jones, James H; Kjellstrom, Tord; Schenker, Marc B

2017-07-01

The California heat illness prevention study (CHIPS) devised methodology and collected physiological data to assess heat related illness (HRI) risk in Latino farmworkers. Bilingual researchers monitored HRI across a workshift, recording core temperature, work rate (metabolic equivalents [METs]), and heart rate at minute intervals. Hydration status was assessed by changes in weight and blood osmolality. Personal data loggers and a weather station measured exposure to heat. Interviewer administered questionnaires were used to collect demographic and occupational information. California farmworkers (n = 588) were assessed. Acceptable quality data was obtained from 80% of participants (core temperature) to 100% of participants (weight change). Workers (8.3%) experienced a core body temperature more than or equal to 38.5 °C and 11.8% experienced dehydration (lost more than 1.5% of body weight). Methodology is presented for the first comprehensive physiological assessment of HRI risk in California farmworkers.

Data-Logger Interface And Test Controller

NASA Technical Reports Server (NTRS)

Burch, Donnie R.

1995-01-01

Data-logger interface and test controller developed to enable automation of tests in conjunction with data-acquisition functions performed by data loggers that have output-switching capabilities. Includes relay logic circuits that remain deenergized until out-of-tolerance condition on any data channel discovered. Designed to be connected to Fluke model 2286A (or equivalent) data-logger system, which features 3 control channels with 6 data inputs per channel. Includes elapsed-time counter that keeps track of power outages.

Comparison of eight logger layouts for monitoring animal-level temperature and humidity during commercial feeder cattle transport.

PubMed

Goldhawk, C; Crowe, T; González, L A; Janzen, E; Kastelic, J; Pajor, E; Schwartzkopf-Genswein, K

2014-09-01

Measuring animal-level conditions during transit provides information regarding the true risk of environmental challenges to cattle welfare during transportation. However, due to constraints on placing loggers at the animal level, there is a need to identify appropriate proxy locations. The objective was to evaluate 8 distributions of ceiling-level loggers in the deck and belly compartments of pot-belly trailers for assessing animal-level temperature and humidity during 5 to 18 h commercial transportation of feeder cattle. Ambient conditions during transportation ranged from 3.6 to 45.2°C (20.3 ± 7.61°C, mean ± SD). When considering the entire journey, average differences between ceiling and animal-level temperatures were similar among logger layouts (P > 0.05). The uncertainty in the difference in temperature and humidity between locations was high relative to the magnitude of the difference between animal- and ceiling-level conditions. Single-logger layouts required larger adjustments to predict animal-level conditions within either compartment, during either the entire journey or when the trailer was stationary (P < 0.05). Within certain logger layouts, there were small but significant differences in the ability of regression equations to predict animal-level conditions that were associated with cattle weight and available space relative to body size. Furthermore, evaluation of logger layouts based solely on the entire journey without consideration of stationary periods did not adequately capture variability in layout performance. In conclusion, to adequately monitor animal-level temperature and humidity, 10 loggers distributed throughout the compartment was recommended over single-logger layouts within both the deck and belly compartments of pot-belly trailers transporting feeder cattle in warm weather.

Structural study of the membrane protein MscL using cell-free expression and solid-state NMR

NASA Astrophysics Data System (ADS)

Abdine, Alaa; Verhoeven, Michiel A.; Park, Kyu-Ho; Ghazi, Alexandre; Guittet, Eric; Berrier, Catherine; Van Heijenoort, Carine; Warschawski, Dror E.

2010-05-01

High-resolution structures of membrane proteins have so far been obtained mostly by X-ray crystallography, on samples where the protein is surrounded by detergent. Recent developments of solid-state NMR have opened the way to a new approach for the study of integral membrane proteins inside a membrane. At the same time, the extension of cell-free expression to the production of membrane proteins allows for the production of proteins tailor made for NMR. We present here an in situ solid-state NMR study of a membrane protein selectively labeled through the use of cell-free expression. The sample consists of MscL (mechano-sensitive channel of large conductance), a 75 kDa pentameric α-helical ion channel from Escherichia coli, reconstituted in a hydrated lipid bilayer. Compared to a uniformly labeled protein sample, the spectral crowding is greatly reduced in the cell-free expressed protein sample. This approach may be a decisive step required for spectral assignment and structure determination of membrane proteins by solid-state NMR.

Mechanosensitive Ion Channels in Bacteria: Functional Domains and Mechanisms of Gating

NASA Technical Reports Server (NTRS)

Sukharev, Sergei

2003-01-01

The past funding period was productive for the group. The progress in the mechanosensitive channel field was critically affected in the end of 1998 by the solution of the crystal structure of the mycobacterial homolog of MscL by our colleagues from Caltech. Having the structure of TbMscL in the closed state, we developed a detailed homology model of EcoMscL, and related the structural model with the wealth of functional phenomenology available for the E. coli version of the channel (EcoMscL). The biophysical properties of the open MscL helped to model the open conformation and infer the pathway for the entire gating transition. The following experiments provided strong support to the atomic model of the gating process, and allowed to make further predictions. The work has advanced our understanding of tension-driven conformational transitions in membrane-embedded mechanosensory proteins, determine major energetic contributions and set the stage for further exploration of the whole family of mechanosensitive channels. The results have been published in seven experimental and theoretical papers, with three other papers currently in press or in preparation.

Design of an accurate wireless data logger for vibration analysis with Android interface.

PubMed

Blanco, J R; Menéndez, J; Ferrero, F J; Campo, J C; Valledor, M

2016-12-01

In this work a new accurate wireless data logger using the Android interface was developed to monitor vibrations at low-cost. The new data logger is completely autonomous and extremely reduced in size. This instrument enables data collection wirelessly and the ability to display it on any tablet or smartphone with operating system Android. The prototype allows the monitoring of any industrial system with minimal investment in material and installation costs. The data logger is capable of making 12.8 kSPS enough to sample up to 5 kHz signals. The basic specification of the data logger includes a high resolution 1-axis piezoelectric accelerometer with a working range of ±30 G. In addition to the acceleration measurements, temperature can also be recorded. The data logger was tested during a 6-month period in industrial environments. The details of the specific hardware and software design are described. The proposed technology can be easily transferred to many other areas of industrial monitoring.

Optimising crime scene temperature collection for forensic entomology casework.

PubMed

Hofer, Ines M J; Hart, Andrew J; Martín-Vega, Daniel; Hall, Martin J R

2017-01-01

The value of minimum post-mortem interval (minPMI) estimations in suspicious death investigations from insect evidence using temperature modelling is indisputable. In order to investigate the reliability of the collected temperature data used for modelling minPMI, it is necessary to study the effects of data logger location on the accuracy and precision of measurements. Digital data logging devices are the most commonly used temperature measuring devices in forensic entomology, however, the relationship between ambient temperatures (measured by loggers) and body temperatures has been little studied. The placement of loggers in this study in three locations (two outdoors, one indoors) had measurable effects when compared with actual body temperature measurements (simulated with pig heads), some more significant than others depending on season, exposure to the environment and logger location. Overall, the study demonstrated the complexity of the question of optimal logger placement at a crime scene and the potential impact of inaccurate temperature data on minPMI estimations, showing the importance of further research in this area and development of a standard protocol. Initial recommendations are provided for data logger placement (within a Stevenson Screen where practical), situations to avoid (e.g. placement of logger in front of windows when measuring indoor temperatures), and a baseline for further research into producing standard guidelines for logger placement, to increase the accuracy of minPMI estimations and, thereby, the reliability of forensic entomology evidence in court. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Profile of a city: characterizing and classifying urban soils in the city of Ghent

NASA Astrophysics Data System (ADS)

Delbecque, Nele; Verdoodt, Ann

2017-04-01

Worldwide, urban lands are expanding rapidly. Conversion of agricultural and natural landscapes to urban fabric can strongly influence soil properties through soil sealing, excavation, leveling, contamination, waste disposal and land management. Urban lands, often characterized by intensive use, need to deliver many production, ecological and cultural ecosystem services. To safeguard this natural capital for future generations, an improved understanding of biogeochemical characteristics, processes and functions of urban soils in time and space is essential. Additionally, existing (inter)national soil classification systems, based on the identification of soil genetic horizons, do not always allow a functional classification of urban soils. This research aims (1) to gain insight into urban soils and their properties in the city of Ghent (Belgium), and (2) to develop a procedure to functionally incorporate urban soils into existing (inter)national soil classification systems. Undisturbed soil cores (depth up to 1.25 m) are collected at 15 locations in Ghent with different times since development and land uses. Geotek MSCL-scans are taken to determine magnetic susceptibility and gamma density and to obtain high resolution images. Physico-chemical characterization of the soil cores is performed by means of detailed soil profile descriptions, traditional lab analyses, as well as proximal soil sensing techniques (XRF). The first results of this research will be presented and critically discussed to improve future efforts to characterize, classify and evaluate urban soils and their ecosystem services.

Measuring stream temperature with digital data loggers: a user's guide

Treesearch

Jason Dunham; Gwynne Chandler; Bruce Rieman; Don Martin

2005-01-01

Digital data loggers (thermographs) are among the most widespread instruments in use for monitoring physical conditions in aquatic ecosystems. The intent of this protocol is to provide guidelines for selecting and programming data loggers, sampling water temperatures in the field, data screening and analysis, and data archiving.

Controlling sediment collection with data loggers

Treesearch

Rand E. Eads

1991-01-01

Abstract - The proliferation of commercial non-programmable data loggers in the past five years has done little to increase sediment sampling efficiency in remote locations. Recent advances in microelectronics have encouraged the development of commercial, low-power, programmable data loggers at reasonable cost. Although some facets of hydrologic data collection may...

Assessing safety awareness and knowledge and behavioral change among West Virginia loggers

PubMed Central

Helmkamp, J; Bell, J; Lundstrom, W; Ramprasad, J; Haque, A

2004-01-01

Objective: To determine if a video used during logger training influences safety attitude, knowledge, and workplace habits. Method: From April 2002 to October 2003, loggers receiving training through the West Virginia Division of Forestry were given a new safety module. This consisted of a pre-training survey, viewing video, brief introduction to field safety guide, and an immediate post-training survey. Six months after training, loggers were contacted by telephone to assess workplace behavioral changes. Results: 1197 loggers attended 80 training sessions and completed surveys; 21% were contacted at follow up. Pre-training surveys indicated that half said "accidents" were part of the job and had experienced a "close call" in their work. An overwhelming majority felt that safety management and periodic meetings were important. Over 75% indicated they would not take risks in order to make a profit. Several statistically significant improvements were noted in safety knowledge after viewing the video: logger's location in relation to the tree stump during fatal incidents and the pictorial identification of an overloaded truck and the safest cutting notch. At follow up, many of the loggers said they related to the real life victim stories portrayed in the video. Further, the field guide served as a quick and easy reference and taught them valuable tips on safe cutting and felling. Conclusions: Significant changes in safety knowledge and attitude among certified loggers resulted from viewing the video during training. Subsequent use of the video and field guide at the worksite encouraged positive change in self reported work habits and practices. PMID:15314051

Affordable Open-Source Data Loggers for Distributed Measurements of Sap-Flux, Stem Growth, Relative Humidity, Temperature, and Soil Water Content

NASA Astrophysics Data System (ADS)

Anderson, T.; Jencso, K. G.; Hoylman, Z. H.; Hu, J.

2015-12-01

Characterizing the mechanisms that lead to differences in forest ecosystem productivity across complex terrain remains a challenge. This difficulty can be partially attributed to the cost of installing networks of proprietary data loggers that monitor differences in the biophysical factors contributing to tree growth. Here, we describe the development and initial application of a network of open source data loggers. These data loggers are based on the Arduino platform, but were refined into a custom printed circuit board (PCB). This reduced the cost and complexity of the data loggers, which made them cheap to reproduce and reliable enough to withstand the harsh environmental conditions experienced in Ecohydrology studies. We demonstrate the utility of these loggers for high frequency, spatially-distributed measurements of sap-flux, stem growth, relative humidity, temperature, and soil water content across 36 landscape positions in the Lubrecht Experimental Forest, MT, USA. This new data logging technology made it possible to develop a spatially distributed monitoring network within the constraints of our research budget and may provide new insights into factors affecting forest productivity across complex terrain.

The Gem Infrasound Logger and Custom-Built Instrumentation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Anderson, Jacob F.; Johnson, Jeffrey B.; Bowman, Daniel C.

Here, we designed, built, and recorded data with a custom infrasound logger (referred to as the Gem) that is inexpensive, portable, and easy to use. We also describe its design process, qualities, and applications in this article. Field instrumentation is a key element of geophysical data collection, and the quantity and quality of data that can be recorded is determined largely by the characteristics of the instruments used. Geophysicists tend to rely on commercially available instruments, which suffice for many important types of fieldwork. However, commercial instrumentation can fall short in certain roles, which motivates the development of custom sensorsmore » and data loggers. Particularly, we found existing data loggers to be expensive and inconvenient for infrasound campaigns, and developed the Gem infrasound logger in response. In this article, we discuss development of this infrasound logger and the various uses found for it, including projects on volcanoes, high-altitude balloons, and rivers. Further, we demonstrate that when needed, scientists can feasibly design and build their own specialized instruments, and that doing so can enable them to record more and better data at a lower cost.« less

The Gem Infrasound Logger and Custom-Built Instrumentation

DOE PAGES

Anderson, Jacob F.; Johnson, Jeffrey B.; Bowman, Daniel C.; ...

2017-11-22

Here, we designed, built, and recorded data with a custom infrasound logger (referred to as the Gem) that is inexpensive, portable, and easy to use. We also describe its design process, qualities, and applications in this article. Field instrumentation is a key element of geophysical data collection, and the quantity and quality of data that can be recorded is determined largely by the characteristics of the instruments used. Geophysicists tend to rely on commercially available instruments, which suffice for many important types of fieldwork. However, commercial instrumentation can fall short in certain roles, which motivates the development of custom sensorsmore » and data loggers. Particularly, we found existing data loggers to be expensive and inconvenient for infrasound campaigns, and developed the Gem infrasound logger in response. In this article, we discuss development of this infrasound logger and the various uses found for it, including projects on volcanoes, high-altitude balloons, and rivers. Further, we demonstrate that when needed, scientists can feasibly design and build their own specialized instruments, and that doing so can enable them to record more and better data at a lower cost.« less

Measurement of heat stress conditions at cow level and comparison to climate conditions at stationary locations inside a dairy barn.

PubMed

Schüller, Laura K; Heuwieser, Wolfgang

2016-08-01

The objectives of this study were to examine heat stress conditions at cow level and to investigate the relationship to the climate conditions at 5 different stationary locations inside a dairy barn. In addition, we compared the climate conditions at cow level between primiparous and multiparous cows for a period of 1 week after regrouping. The temperature-humidity index (THI) differed significantly between all stationary loggers. The lowest THI was measured at the window logger in the experimental stall and the highest THI was measured at the central logger in the experimental stall. The THI at the mobile cow loggers was 2·33 THI points higher than at the stationary loggers. Furthermore, the mean daily THI was higher at the mobile cow loggers than at the stationary loggers on all experimental days. The THI in the experimental pen was 0·44 THI points lower when the experimental cow group was located inside the milking parlour. The THI measured at the mobile cow loggers was 1·63 THI points higher when the experimental cow group was located inside the milking parlour. However, there was no significant difference for all climate variables between primiparous and multiparous cows. These results indicate, there is a wide range of climate conditions inside a dairy barn and especially areas with a great distance to a fresh air supply have an increased risk for the occurrence of heat stress conditions. Furthermore, the heat stress conditions are even higher at cow level and cows not only influence their climatic environment, but also generate microclimates within different locations inside the barn. Therefore climate conditions should be obtained at cow level to evaluate the heat stress conditions that dairy cows are actually exposed to.

A Data-Based Console Logger for Mission Operations Team Coordination

NASA Technical Reports Server (NTRS)

Thronesbery, Carroll; Malin, Jane T.; Jenks, Kenneth; Overland, David; Oliver, Patrick; Zhang, Jiajie; Gong, Yang; Zhang, Tao

2005-01-01

Concepts and prototypes1,2 are discussed for a data-based console logger (D-Logger) to meet new challenges for coordination among flight controllers arising from new exploration mission concepts. The challenges include communication delays, increased crew autonomy, multiple concurrent missions, reduced-size flight support teams that include multidisciplinary flight controllers during quiescent periods, and migrating some flight support activities to flight controller offices. A spiral development approach has been adopted, making simple, but useful functions available early and adding more extensive support later. Evaluations have guided the development of the D-Logger from the beginning and continue to provide valuable user influence about upcoming requirements. D-Logger is part of a suite of tools designed to support future operations personnel and crew. While these tools can be used independently, when used together, they provide yet another level of support by interacting with one another. Recommendations are offered for the development of similar projects.

Using LiDAR and remote microclimate loggers to downscale near-surface air temperatures for site-level studies

Treesearch

Andrew D. George; Frank R. Thompson; John. Faaborg

2015-01-01

A spatial mismatch exists between regional climate models and conditions experienced by individual organisms. We demonstrate an approach to downscaling air temperatures for site-level studies using airborne LiDAR data and remote microclimate loggers. In 2012-2013, we established a temperature logger network in the forested region of central Missouri, USA, and obtained...

NUMERICAL SIMULATION OF NANOINDENTATION AND PATCH CLAMP EXPERIMENTS ON MECHANOSENSITIVE CHANNELS OF LARGE CONDUCTANCE IN ESCHERICHIA COLI

PubMed Central

Tang, Yuye; Chen, Xi; Yoo, Jejoong; Yethiraj, Arun; Cui, Qiang

2010-01-01

A hierarchical simulation framework that integrates information from all-atom simulations into a finite element model at the continuum level is established to study the mechanical response of a mechanosensitive channel of large conductance (MscL) in bacteria Escherichia Coli (E.coli) embedded in a vesicle formed by the dipalmitoylphosphatidycholine (DPPC) lipid bilayer. Sufficient structural details of the protein are built into the continuum model, with key parameters and material properties derived from molecular mechanics simulations. The multi-scale framework is used to analyze the gating of MscL when the lipid vesicle is subjective to nanoindentation and patch clamp experiments, and the detailed structural transitions of the protein are obtained explicitly as a function of external load; it is currently impossible to derive such information based solely on all-atom simulations. The gating pathways of E.coli-MscL qualitatively agree with results from previous patch clamp experiments. The gating mechanisms under complex indentation-induced deformation are also predicted. This versatile hierarchical multi-scale framework may be further extended to study the mechanical behaviors of cells and biomolecules, as well as to guide and stimulate biomechanics experiments. PMID:21874098

Incidence of the 1996 U.S.-Canada Softwood lumber agreement among landowners, loggers, and lumber manufacturers in the U.S. South

Treesearch

Yanshu Li; Daowei Zhang

2010-01-01

A framework was developed to estimate the welfare incidence of the 1996 U.S.-Canada Softwood Lumber Agreement among producers in two-processing-stage markets--timberland owners, loggers, and lumber manufacturers--in the U.S. South. Timberland owners are the largest beneficiary whereas lumber manufacturers are the second and loggers the least. Empirically, without...

Chew Bahir, southern Ethiopia: an archive of environmental history during the evolution and dispersal of anatomically modern humans

NASA Astrophysics Data System (ADS)

Schaebitz, F.; Asrat, A.; Lamb, H. F.; Trauth, M. H.; Junginger, A.; Foerster, V. E.; Guenter, C.; Viehberg, F. A.; Just, J.; Roberts, H. M.; Chapot, M. S.; Leng, M. J.; Dean, J.; Cohen, A. S.

2016-12-01

Chew Bahir is a tectonic basin in the southern Ethiopian Rift, close to the Lower Omo valley, site of earliest known fossil of anatomically modern humans. It was drilled in Nov-Dec 2014 as part of the Hominin Sites and Paleolakes Drilling Project (HSPDP) and the Collaborative Research Center (CRC806) "Our Way to Europe". Two overlapping cores of mostly clayey silts, reaching a composite depths of 280m, were collected and may cover the last 500,000 years, thus providing a potential record of environmental history during the evolution and spread of anatomically modern humans. Here we present the lithology and stratigraphy of the composite core as well as results of high resolution MSCL and XRF scanning data. Initial sedimentological and geochemical results show that the Chew Bahir deposits are a sensitive record of changes in moisture, sediment influx, provenance, transport and diagenetic processes, evident from mineralogy, elemental concentration and physical properties. The potassium record is highly sensitive to changes in moisture balance (Foerster et al. 2015). XRF and XRD data suggest that the process linking climate with potassium concentrations is the diagenetic illitization of smectites during dry episodes with high alkalinity and salinity in the closed-basin lake. The core records will allow tests of the various hypotheses about the influence of environmental change on the evolution and dispersal of anatomically modern humans. Foerster, V., Vogelsang, R., Junginger, A., Asrat, A., Lamb, H.F., Schaebitz, F., Trauth, M.H. (2015): Environmental Change and Human Occupation of Southern Ethiopia and Northern Kenya during the last 20,000 years. Quaternary Science Reviews, 129: 333-340. doi:10.1016/j.quascirev.2015.10.026.

Worldwide Research, Worldwide Participation: Web-Based Test Logger

NASA Technical Reports Server (NTRS)

Clark, David A.

1998-01-01

Thanks to the World Wide Web, a new paradigm has been born. ESCORT (steady state data system) facilities can now be configured to use a Web-based test logger, enabling worldwide participation in tests. NASA Lewis Research Center's new Web-based test logger for ESCORT automatically writes selected test and facility parameters to a browser and allows researchers to insert comments. All data can be viewed in real time via Internet connections, so anyone with a Web browser and the correct URL (universal resource locator, or Web address) can interactively participate. As the test proceeds and ESCORT data are taken, Web browsers connected to the logger are updated automatically. The use of this logger has demonstrated several benefits. First, researchers are free from manual data entry and are able to focus more on the tests. Second, research logs can be printed in report format immediately after (or during) a test. And finally, all test information is readily available to an international public.

A Custom Data Logger for Real-Time Remote Field Data Collections

DTIC Science & Technology

2017-03-01

ERDC/CHL CHETN-VI-46 March 2017 Approved for public release; distribution is unlimited. A Custom Data Logger for Real- Time Remote Field Data...Field Research Facility (FRF), for remote real- time data collections. This custom data logger is compact and energy efficient but has the same...INTRODUCTION: Real- time data collections offer many advantages: 1. Instrument failures can be rapidly detected and repaired, thereby minimizing

Progress on Component Evaluation for Nuclear Explosion Monitoring

DTIC Science & Technology

2008-09-01

one data logger, Geotech Smart24. For the infrasound sensors tested, the test results allow us to conclude that both sensors had sufficiently quiet...a lower frequency than expected. Sandia was also asked to evaluate the Geotech Smart24 data logger for qualification as a replacement to the Geotech ...results of using 26-bit quantization. Characterization Geotech Smart24 Data-Logger with Active Fortezza Crypto Card Data Signing Over the spring

Data logging of body temperatures provides precise information on phenology of reproductive events in a free-living arctic hibernator

USGS Publications Warehouse

Williams, C.T.; Sheriff, M.J.; Schmutz, J.A.; Kohl, F.; Toien, O.; Buck, C.L.; Barnes, B.M.

2011-01-01

Precise measures of phenology are critical to understanding how animals organize their annual cycles and how individuals and populations respond to climate-induced changes in physical and ecological stressors. We show that patterns of core body temperature (T b) can be used to precisely determine the timing of key seasonal events including hibernation, mating and parturition, and immergence and emergence from the hibernacula in free-living arctic ground squirrels (Urocitellus parryii). Using temperature loggers that recorded T b every 20 min for up to 18 months, we monitored core T b from three females that subsequently gave birth in captivity and from 66 female and 57 male ground squirrels free-living in the northern foothills of the Brooks Range Alaska. In addition, dates of emergence from hibernation were visually confirmed for four free-living male squirrels. Average T b in captive females decreased by 0.5–1.0°C during gestation and abruptly increased by 1–1.5°C on the day of parturition. In free-living females, similar shifts in T b were observed in 78% (n = 9) of yearlings and 94% (n = 31) of adults; females without the shift are assumed not to have given birth. Three of four ground squirrels for which dates of emergence from hibernation were visually confirmed did not exhibit obvious diurnal rhythms in T b until they first emerged onto the surface when T b patterns became diurnal. In free-living males undergoing reproductive maturation, this pre-emergence euthermic interval averaged 20.4 days (n = 56). T b-loggers represent a cost-effective and logistically feasible method to precisely investigate the phenology of reproduction and hibernation in ground squirrels.

Monitoring stream temperatures—A guide for non-specialists

USGS Publications Warehouse

Heck, Michael P.; Schultz, Luke D.; Hockman-Wert, David; Dinger, Eric C.; Dunham, Jason B.

2018-04-19

Executive SummaryWater temperature influences most physical and biological processes in streams, and along with streamflows is a major driver of ecosystem processes. Collecting data to measure water temperature is therefore imperative, and relatively straightforward. Several protocols exist for collecting stream temperature data, but these are frequently directed towards specialists. This document was developed to address the need for a protocol intended for non-specialists (non-aquatic) staff. It provides specific step-by-step procedures on (1) how to launch data loggers, (2) check the factory calibration of data loggers prior to field use, (3) how to install data loggers in streams for year-round monitoring, (4) how to download and retrieve data loggers from the field, and (5) how to input project data into organizational databases.

Ethernet based data logger for gaseous detectors

NASA Astrophysics Data System (ADS)

Swain, S.; Sahu, P. K.; Sahu, S. K.

2018-05-01

A data logger is designed to monitor and record ambient parameters such as temperature, pressure and relative humidity along with gas flow rate as a function of time. These parameters are required for understanding the characteristics of gas-filled detectors such as Gas Electron Multiplier (GEM) and Multi-Wire Proportional Counter (MWPC). The data logger has different microcontrollers and has been interfaced to an ethernet port with a local LCD unit for displaying all measured parameters. In this article, the explanation of the data logger design, hardware, and software description of the master microcontroller and the DAQ system along with LabVIEW interface client program have been presented. We have implemented this device with GEM detector and displayed few preliminary results as a function of above parameters.

Inexpensive, Low Power, Open-Source Data Logging hardware development

NASA Astrophysics Data System (ADS)

Sandell, C. T.; Schulz, B.; Wickert, A. D.

2017-12-01

Over the past six years, we have developed a suite of open-source, low-cost, and lightweight data loggers for scientific research. These loggers employ the popular and easy-to-use Arduino programming environment, but consist of custom hardware optimized for field research. They may be connected to a broad and expanding range of off-the-shelf sensors, with software support built in directly to the "ALog" library. Three main models exist: The ALog (for Autonomous or Arduino Logger) is the extreme low-power model for years-long deployments with only primary AA or D batteries. The ALog shield is a stripped-down ALog that nests with a standard Arduino board for prototyping or education. The TLog (for Telemetering Logger) contains an embedded radio with 500 m range and a GPS for communications and precision timekeeping. This enables meshed networks of loggers that can send their data back to an internet-connected "home base" logger for near-real-time field data retrieval. All boards feature feature a high-precision clock, full size SD card slot for high-volume data storage, large screw terminals to connect sensors, interrupts, SPI and I2C communication capability, and 3.3V/5V power outputs. The ALog and TLog have fourteen 16-bit analog inputs with a precision voltage reference for precise analog measurements. Their components are rated -40 to +85 degrees C, and they have been tested in harsh field conditions. These low-cost and open-source data loggers have enabled our research group to collect field data across North and South America on a limited budget, support student projects, and build toward better future scientific data systems.

Use of Electronic Loggers to Measure Changes in the Rates of Hand Washing with Soap in Low-Income Urban Households in India

PubMed Central

Wright, Richard L.; Zillmer, Ruediger; Biran, Adam; Hall, Peter; Sidibe, Myriam

2015-01-01

We evaluated the utility of electronic loggers to measure the effects of a simple intervention designed to influence the rates of hand washing with soap within enclosed toilets and bathrooms in low-income urban households in Kerala, India. 58 households were given three items with embedded electronic loggers for a period of 2-5 days. Two logged soaps tracked hand and body washing in the bathroom. The third logged item was a water vessel used for flushing the toilet and for post-defecation anal cleansing; this served as a marker of toilet use. In addition, 28 households in a Soap by toilet arm were given an additional logged soap, to be kept by the toilet, and used for hand washing. Compared with the Soap in bathroom arm, the loggers in the Soap by toilet households recorded 73% greater daily use of soaps designated for hand washing (t(36)=2.92, p<0.01) and 172% greater use within 2 minutes of the use of the water vessel (t(36)=3.51, p = 0.001). We conclude that the loggers were capable of detecting changes in the rates of hand washing with soap and changes in hand washing with soap after use of the toilet. Further adoption of logger technologies would enable more insightful studies of hand washing within urban environments. PMID:26101886

Use of Electronic Loggers to Measure Changes in the Rates of Hand Washing with Soap in Low-Income Urban Households in India.

PubMed

Wright, Richard L; Zillmer, Ruediger; Biran, Adam; Hall, Peter; Sidibe, Myriam

2015-01-01

We evaluated the utility of electronic loggers to measure the effects of a simple intervention designed to influence the rates of hand washing with soap within enclosed toilets and bathrooms in low-income urban households in Kerala, India. 58 households were given three items with embedded electronic loggers for a period of 2-5 days. Two logged soaps tracked hand and body washing in the bathroom. The third logged item was a water vessel used for flushing the toilet and for post-defecation anal cleansing; this served as a marker of toilet use. In addition, 28 households in a Soap by toilet arm were given an additional logged soap, to be kept by the toilet, and used for hand washing. Compared with the Soap in bathroom arm, the loggers in the Soap by toilet households recorded 73% greater daily use of soaps designated for hand washing (t(36)=2.92, p<0.01) and 172% greater use within 2 minutes of the use of the water vessel (t(36)=3.51, p = 0.001). We conclude that the loggers were capable of detecting changes in the rates of hand washing with soap and changes in hand washing with soap after use of the toilet. Further adoption of logger technologies would enable more insightful studies of hand washing within urban environments.

Performance of Proximity Loggers in Recording Intra- and Inter-Species Interactions: A Laboratory and Field-Based Validation Study

PubMed Central

Carter, Stephen P.; Bearhop, Stuart; Harrison, Xavier A.; Dall, Sasha R. X.; McDonald, Robbie A.; Delahay, Richard J.

2012-01-01

Knowledge of the way in which animals interact through social networks can help to address questions surrounding the ecological and evolutionary consequences of social organisation, and to understand and manage the spread of infectious diseases. Automated proximity loggers are increasingly being used to record interactions between animals, but the accuracy and reliability of the collected data remain largely un-assessed. Here we use laboratory and observational field data to assess the performance of these devices fitted to a herd of 32 beef cattle (Bos taurus) and nine groups of badgers (Meles meles, n  = 77) living in the surrounding woods. The distances at which loggers detected each other were found to decrease over time, potentially related to diminishing battery power that may be a function of temperature. Loggers were highly accurate in recording the identification of contacted conspecifics, but less reliable at determining contact duration. There was a tendency for extended interactions to be recorded as a series of shorter contacts. We show how data can be manipulated to correct this discrepancy and accurately reflect observed interaction patterns by combining records between any two loggers that occur within a 1 to 2 minute amalgamation window, and then removing any remaining 1 second records. We make universally applicable recommendations for the effective use of proximity loggers, to improve the validity of data arising from future studies. PMID:22745704

Finite element simulation of the gating mechanism of mechanosensitive ion channels

NASA Astrophysics Data System (ADS)

Bavi, Navid; Qin, Qinghua; Martinac, Boris

2013-08-01

In order to eliminate limitations of existing experimental or computational methods (such as patch-clamp technique or molecular dynamic analysis) a finite element (FE) model for multi length-scale and time-scale investigation on the gating mechanism of mechanosensitive (MS) ion channels has been established. Gating force value (from typical patch clamping values) needed to activate Prokaryotic MS ion channels was applied as tensional force to the FE model of the lipid bilayer. Making use of the FE results, we have discussed the effects of the geometrical and the material properties of the Escherichia coli MscL mechanosensitive ion channel opening in relation to the membrane's Young's modulus (which will vary depending on the cell type or cholesterol density in an artificial membrane surrounding the MscL ion channel). The FE model has shown that when the cell membrane stiffens the required channel activation force increases considerably. This is in agreement with experimental results taken from the literature. In addition, the present study quantifies the relationship between the membrane stress distribution around a `hole' for modeling purposes and the stress concentration in the place transmembrane proteins attached to the hole by applying an appropriate mesh refinement as well as well defining contact condition in these areas.

Practical considerations in the measurement of the internal relative humidity of pharmaceutical packages with data loggers.

PubMed

Nelson, Eric D; Huang, Henry

2011-03-01

The utility of temperature/humidity data loggers are evaluated as a low-cost approach to enrich practical understanding of the actual time dependent humidity that a pharmaceutical product is exposed to. While this approach is found to have significant utility in general, small systematic biases in the measurements due to the presence of the data logger are observed. Taking these biases into account enables more productive extrapolation of measured time/humidity profiles. © 2011 American Association of Pharmaceutical Scientists

Niche logging

Treesearch

Robert B. Rummer

1997-01-01

Logging is facing a world of change. A logger?s niche can be defined by terrain, climate, location, timber and product, local government, Federal government, landowners, and mills. The author offers strategies for survival and successful competition.

Sedimentological, mineralogical, and geochemical results from surface sediments and the sediment record from Site 2 of the ICDP drilling project at Lake Towuti, Indonesia

NASA Astrophysics Data System (ADS)

Hasberg, A. K.; Melles, M.; Wennrich, V.; Vogel, H.; Just, J.; Russell, J. M.; Bijaksana, S.; Morlock, M.; Opitz, S.

2017-12-01

More than 1000 m of sediment core were recovered in spring 2015 from three different drill sites in tropical Lake Towuti (2.5°S, 121°E), Indonesia, during the Towuti Drilling Project (TDP) of the International Continental Scientific Drilling Program (ICDP). Furthermore, a set of 84 lake surface sediment samples, distributed over the entire lake, was collected in order to better understand modern sedimentary processes. The surface samples were investigated for physical, chemical, mineralogical, and biological properties at the University of Cologne (UoC), Germany. On the sediment cores macro- and microscopical lithological descriptions, line-scan imaging, logging of physical properties (MSCL), and subsampling was conducted at the National Lacustrine Core Facility of the University of Minnesota, USA, in November 2015 and January 2016. Afterwards, the archive core halves and 672 subsamples of TDP Site 2 were shipped to the UoC for X-Ray Fluorescence (XRF) scanning and sedimentological, geochemical, and mineralogical analyses, respectively, supplemented by visible to near-infrared spectroscopy (VNIR) at Brown University, USA. The data from the surface samples evidence that allochthonous sedimentation in Lake Towuti today is dominated by fluvial supply from five distinguishable source areas: (i) the Mahalona River to the north, which drains lakes Mahalona and Matano, (ii) inlets around the village of Timampu to the northwest, (iii) the Loeha River to the east, (iv) the Lengke River to the south, and (v) the Lemo-Lemo River to the northeast of Lake Towuti. Of these, source areas (ii) and (iii) as well as (iv) and (v) have similar geochemical compositions, respectively. In addition, the lake sedimentation is significantly influenced by gravitational sediment supply from steep slopes as well as lake-internal gravitational and density-driven processes. The uppermost 41 m of sediment core 2A consist of pelagic sediments (totaling 11 m) and event layers from mass movement ( 30 m) that were formed during the past 50 cal kyr. In this period, the data reflect significant climatic and environmental changes, in particular in precipitation and lake level. These changes seem to be coupled to prominent paleoclimatic events.

Mor-Bell Logger: Skidding Case Study

Treesearch

Bryce J. Stokes; Jerry L. Koger; Frank J. Pickle

1983-01-01

A production equation was developed for the Mor-Bell logger for skidding while thinning a loblolly pine plantation. Production and costs for skidding and iron gate delimbing were determined for a range of operating conditions.

Application of vaginal temperature measurement in bitches.

PubMed

Maeder, B; Arlt, S; Burfeind, O; Heuwieser, W

2012-12-01

Finding innovative, non-invasive methods for continuously measuring body temperature minimizing human interference is important for accurate data collection. The objective of this study was to assess feasibility and accuracy of continuous body temperature measurements with loggers placed in the vaginal cavity of bitches. First, an in vitro experiment was performed to compare values obtained by temperature loggers (n = 26) to a calibrated liquid-in-glass thermometer. The mean differences between the two methods were low. Next, an in vivo experiment was performed using five healthy bitches, and values obtained by the vaginal loggers were compared to measurements collected rectally with digital thermometers. The results show that rectal and vaginal temperatures were correlated. The mean differences between rectal and vaginal temperatures were negligible. We conclude that the utilized temperature loggers provide accurate and reliable data. © 2012 Blackwell Verlag GmbH.

Data logger technologies for manual wheelchairs: A scoping review.

PubMed

Routhier, François; Lettre, Josiane; Miller, William C; Borisoff, Jaimie F; Keetch, Kate; Mitchell, Ian M; Research Team, CanWheel

2018-01-01

In recent years, studies have increasingly employed data logger technologies to record objective driving and physiological characteristics of manual wheelchair users. However, the technologies used offer significant differences in characteristics, such as measured outcomes, ease of use, and level of burden. In order to identify and describe the extent of published research activity that relies on data logger technologies for manual wheelchair users, we performed a scoping review of the scientific and gray literature. Five databases were searched: Medline, Compendex, CINAHL, EMBASE, and Google Scholar. The 119 retained papers document a wide variety of logging devices and sensing technologies measuring a range of outcomes. The most commonly used technologies were accelerometers installed on the user (18.8%), odometers installed on the wheelchair (12.4%), accelerometers installed on the wheelchair (9.7%), and heart monitors (9.7%). Not surprisingly, the most reported outcomes were distance, mobility events, heart rate, speed/velocity, acceleration, and driving time. With decreasing costs and technological improvements, data loggers are likely to have future widespread clinical (and even personal) use. Future research may be needed to assess the usefulness of different outcomes and to develop methods more appropriate to wheelchair users in order to optimize the practicality of wheelchair data loggers.

The effect of spiked boots on logger safety, productivity and workload.

PubMed

Kirk, P; Parker, R

1994-04-01

Analysis of 1657 lost-time logging accidents in the New Zealand logging industry (1985-1991) indicates that 17.5% were as a result of slips, trips and falls and a total of 2870 days were lost. Most (56%) of these slipping, tripping and falling accidents occurred in the felling and delimbing phase of the logging operation, where 37% of the workforce are employed. In an attempt to reduce the number of slipping injuries to loggers employed in felling and delimbing, a study of the effectiveness of spike-soled (caulk) boots was undertaken. Four loggers were intensively observed at work, by continuous time-study methods, while wearing their conventional rubber-soled boots and then spike-soled boots. The number of slips, work methods used, physiological workload and productivity were compared for loggers wearing the two footwear types. Results indicated that spike-soled boots were associated with a significant reduction in the frequency of slips and had no adverse effect on work methods, physiological workload or productivity. Spike-soled boots are now being promoted for use by loggers in New Zealand as a simple method to reduce slipping, tripping and falling accidents.

Modeling spatial decisions with graph theory: logging roads and forest fragmentation in the Brazilian Amazon.

PubMed

Walker, Robert; Arima, Eugenio; Messina, Joe; Soares-Filho, Britaldo; Perz, Stephen; Vergara, Dante; Sales, Marcio; Pereira, Ritaumaria; Castro, Williams

2013-01-01

This article addresses the spatial decision-making of loggers and implications for forest fragmentation in the Amazon basin. It provides a behavioral explanation for fragmentation by modeling how loggers build road networks, typically abandoned upon removal of hardwoods. Logging road networks provide access to land, and the settlers who take advantage of them clear fields and pastures that accentuate their spatial signatures. In shaping agricultural activities, these networks organize emergent patterns of forest fragmentation, even though the loggers move elsewhere. The goal of the article is to explicate how loggers shape their road networks, in order to theoretically explain an important type of forest fragmentation found in the Amazon basin, particularly in Brazil. This is accomplished by adapting graph theory to represent the spatial decision-making of loggers, and by implementing computational algorithms that build graphs interpretable as logging road networks. The economic behavior of loggers is conceptualized as a profit maximization problem, and translated into spatial decision-making by establishing a formal correspondence between mathematical graphs and road networks. New computational approaches, adapted from operations research, are used to construct graphs and simulate spatial decision-making as a function of discount rates, land tenure, and topographic constraints. The algorithms employed bracket a range of behavioral settings appropriate for areas of terras de volutas, public lands that have not been set aside for environmental protection, indigenous peoples, or colonization. The simulation target sites are located in or near so-called Terra do Meio, once a major logging frontier in the lower Amazon Basin. Simulation networks are compared to empirical ones identified by remote sensing and then used to draw inferences about factors influencing the spatial behavior of loggers. Results overall suggest that Amazonia's logging road networks induce more fragmentation than necessary to access fixed quantities of wood. The paper concludes by considering implications of the approach and findings for Brazil's move to a system of concession logging.

Inexpensive Open-Source Data Logging in the Field

NASA Astrophysics Data System (ADS)

Wickert, A. D.

2013-12-01

I present a general-purpose open-source field-capable data logger, which provides a mechanism to develop dense networks of inexpensive environmental sensors. This data logger was developed as a low-power variant of the Arduino open-source development system, and is named the ALog ("Arduino Logger") BottleLogger (it is slim enough to fit inside a Nalgene water bottle) version 1.0. It features an integrated high-precision real-time clock, SD card slot for high-volume data storage, and integrated power switching. The ALog can interface with sensors via six analog/digital pins, two digital pins, and one digital interrupt pin that can read event-based inputs, such as those from a tipping-bucket rain gauge. We have successfully tested the ALog BottleLogger with ultrasonic rangefinders (for water stage and snow accumulation and melt), temperature sensors, tipping-bucket rain gauges, soil moisture and water potential sensors, resistance-based tools to measure frost heave, and cameras that it triggers based on events. The source code for the ALog, including functions to interface with a a range of commercially-available sensors, is provided as an Arduino C++ library with example implementations. All schematics, circuit board layouts, and source code files are open-source and freely available under GNU GPL v3.0 and Creative Commons Attribution-ShareAlike 3.0 Unported licenses. Through this work, we hope to foster a community-driven movement to collect field environmental data on a budget that permits citizen-scientists and researchers from low-income countries to collect the same high-quality data as researchers in wealthy countries. These data can provide information about global change to managers, governments, scientists, and interested citizens worldwide. Watertight box with ALog BottleLogger data logger on the left and battery pack with 3 D cells on the right. Data can be collected for 3-5 years on one set of batteries.

Laboratory evaluation of the pressure water level data logger manufactured by Infinities USA, Inc.: results of pressure and temperature tests

USGS Publications Warehouse

Carnley, Mark V.

2015-01-01

The Pressure Water Level Data Logger manufactured by Infinities USA, Inc., was evaluated by the U.S. Geological Survey (USGS) Hydrologic Instrumentation Facility for conformance with the manufacturer’s stated accuracy specifications for measuring pressure throughout the device’s operating temperature range and with the USGS accuracy requirements for water-level measurements. The Pressure Water Level Data Logger (Infinities Logger) is a submersible, sealed, water-level sensing device with an operating pressure range of 0 to 11.5 feet of water over a temperature range of −18 to 49 degrees Celsius. For the pressure range tested, the manufacturer’s accuracy specification of 0.1 percent of full scale pressure equals an accuracy of ±0.138 inch of water. Three Infinities Loggers were evaluated, and the testing procedures followed and results obtained are described in this report. On the basis of the test results, the device is poorly compensated for temperature. For the three Infinities Loggers, the mean pressure differences varied from –4.04 to 5.32 inches of water and were not within the manufacturer’s accuracy specification for pressure measurements made within the temperature-compensated range. The device did not meet the manufacturer’s stated accuracy specifications for pressure within its temperature-compensated operating range of –18 to 49 degrees Celsius or the USGS accuracy requirements of no more than 0.12 inch of water (0.01 foot of water) or 0.10 percent of reading, whichever is larger. The USGS accuracy requirements are routinely examined and reported when instruments are evaluated at the Hydrologic Instrumentation Facility. The estimated combined measurement uncertainty for the pressure cycling test was ±0.139 inch of water, and for temperature, the cycling test was ±0.127 inch of water for the three Infinities Loggers.

Evaluation of measurement errors of temperature and relative humidity from HOBO data logger under different conditions of exposure to solar radiation.

PubMed

da Cunha, Antonio Ribeiro

2015-05-01

This study aimed to assess measurements of temperature and relative humidity obtained with HOBO a data logger, under various conditions of exposure to solar radiation, comparing them with those obtained through the use of a temperature/relative humidity probe and a copper-constantan thermocouple psychrometer, which are considered the standards for obtaining such measurements. Data were collected over a 6-day period (from 25 March to 1 April, 2010), during which the equipment was monitored continuously and simultaneously. We employed the following combinations of equipment and conditions: a HOBO data logger in full sunlight; a HOBO data logger shielded within a white plastic cup with windows for air circulation; a HOBO data logger shielded within a gill-type shelter (multi-plate prototype plastic); a copper-constantan thermocouple psychrometer exposed to natural ventilation and protected from sunlight; and a temperature/relative humidity probe under a commercial, multi-plate radiation shield. Comparisons between the measurements obtained with the various devices were made on the basis of statistical indicators: linear regression, with coefficient of determination; index of agreement; maximum absolute error; and mean absolute error. The prototype multi-plate shelter (gill-type) used in order to protect the HOBO data logger was found to provide the best protection against the effects of solar radiation on measurements of temperature and relative humidity. The precision and accuracy of a device that measures temperature and relative humidity depend on an efficient shelter that minimizes the interference caused by solar radiation, thereby avoiding erroneous analysis of the data obtained.

Validation of triaxial accelerometers to measure the lying behaviour of adult domestic horses.

PubMed

DuBois, C; Zakrajsek, E; Haley, D B; Merkies, K

2015-01-01

Examining the characteristics of an animal's lying behaviour, such as frequency and duration of lying bouts, has become increasingly relevant for animal welfare research. Triaxial accelerometers have the advantage of being able to continuously monitor an animal's standing and lying behaviour without relying on live observations or video recordings. Multiple models of accelerometers have been validated for use in monitoring dairy cattle; however, no units have been validated for use in equines. This study tested Onset Pendant G data loggers attached to the hind limb of each of two mature Standardbred horses for a period of 5 days. Data loggers were set to record their position every 20 s. Horses were monitored via live observations during the day and by video recordings during the night to compare activity against accelerometer data. All lying events occurred overnight (three to five lying bouts per horse per night). Data collected from the loggers was converted and edited using a macro program to calculate the number of bouts and the length of time each animal spent lying down by hour and by day. A paired t-test showed no significant difference between the video observations and the output from the data loggers (P=0.301). The data loggers did not distinguish standing hipshot from standing square. Predictability, sensitivity, and specificity were all >99%. This study has validated the use of Onset Pendant G data loggers to determine the frequency and duration of standing and lying bouts in adult horses when set to sample and register readings at 20 s intervals.

Evaluating the effectiveness of a logger safety training program.

PubMed

Bell, Jennifer L; Grushecky, Shawn T

2006-01-01

Logger safety training programs are rarely, if ever, evaluated as to their effectiveness in reducing injuries. Workers' compensation claim rates were used to evaluate the effectiveness of a logger safety training program, the West Virginia Loggers' Safety Initiative (LSI). There was no claim rate decline detected in the majority (67%) of companies that participated in all 4 years of the LSI. Furthermore, their rate did not differ from the rest of the WV logging industry that did not participate in the LSI. Worker turnover was significantly related to claim rates; companies with higher turnover of employees had higher claim rates. Companies using feller bunchers to harvest trees at least part of the time had a significantly lower claim rate than companies not using them. Companies that had more inspections per year had lower claim rates. High injury rates persist even in companies that receive safety training; high employee turnover may affect the efficacy of training programs. The logging industry should be encouraged to facilitate the mechanization of logging tasks, to address barriers to employee retention, and to increase the number of in-the-field performance monitoring inspections. Impact on industry There are many states whose logger safety programs include only about 4-8 hours of safe work practices training. These states may look to West Virginia's expanded training program (the LSI) as a model for their own programs. However, the LSI training may not be reaching loggers due to the delay in administering training to new employees and high levels of employee turnover. Regardless of training status, loggers' claim rates decline significantly the longer they work for a company. It may be that high injury rates in the state of West Virginia would be best addressed by finding ways to encourage and facilitate companies to become more mechanized in their harvesting practices, and to increase employee tenure. Increasing the number of yearly performance inspections may also be a venue to reduce claim rates. Future research could investigate in better detail the working conditions of West Virginia loggers and identify barriers to job tenure, particularly for workers whose primary job task is chainsaw operation. A larger-scale study of the effect of performance monitoring inspections on claim rates is also warranted.

75 FR 25246 - Notice of a Project Waiver of Section 1605 (Buy American Requirement) of the American Recovery...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-07

... purchase of three hundred acoustic leak detection sensors/loggers (``loggers'') and one fully programmable... and one programmable radio transceiver (Model: Gutermann Zonescan 820) on the basis that there are no...

AcquiControl: Seismic Data Logger Control via iPhone

NASA Astrophysics Data System (ADS)

Golden, S.; Horkley, B.

2010-12-01

Seismic stations are often placed in remote areas, accessible only a few times per year. A typical stand-alone seismic station consists of the seismometer and a data logger, which records the data to attached disk drives or flash memory for later collection by a field crew. Even if the station uses telemetry, maintenance visits may be minimized but rarely entirely avoided. During station visits, field personnel use laptops or handheld devices to control the data logger and seismometer, check their status, and adjust their configuration if necessary. The efficiency and reliability of these on-site quality control tasks has a significant impact on the overall performance of seismic field operations. One widespread seismic data logger is the RT130 by REFTEK Inc., which is traditionally controlled through REFTEK proprietary software designed to run on Palm compatible devices. While this software functions well, compatible Palm handhelds went out of production and are getting hard to find. Also we felt, that its user interface still offered room for improvement. Therefore, we developed a new RT130 control application, named AcquiControl, which runs on Apple’s iPhone or iPod Touch, and features a redesigned, user-friendly interface. The Palm handheld communicates with the data logger through a serial cable. While this is technically also possible with the iPhone or iPod Touch, the production and licensing costs for the required custom cable so far kept us from further pursuing this path. Instead, AcquiControl makes use of the wireless networking capabilities inherent to any iPhone or iPod Touch. To wirelessly connect to an RT130 data logger, we use a wireless-to-serial “dongle” manufactured by Serialio.com, which attaches directly to the data logger’s serial port. First experiments with this setup have shown, that it is actually more convenient to use than a directly attached serial cable, especially during less than ideal environmental conditions such as present while working in the rain. AcquiControl offers a third-party alternative to interface with RT130 data loggers in the field. Currently it covers most frequently used capabilities of the older Palm software through equivalent features, with plans to add more as needed. Beyond that, the application could be easily adapted to support other data loggers than the RT130, possibly even by other manufacturers. This would give users a more uniform interface regardless of data logger model, which could become an advantage during mixed-equipment campaigns. Also, the same software could be expanded to allow the direct input of various field notes, which could be downloaded together with automatically logged configuration data to ease the preparation of seismic metadata or the building of a project-central seismic database.

A novel design for sap flux data acquisition in large research plots using open source components

NASA Astrophysics Data System (ADS)

Hawthorne, D. A.; Oishi, A. C.

2017-12-01

Sap flux sensors are a widely-used tool for estimating in-situ, tree-level transpiration rates. These probes are installed in the stems of multiple trees within a study area and are typically left in place throughout the year. Sensors vary in their design and theory of operation, but all require electrical power for a heating element and produce at least one analog signal that must be digitized for storage. There are two topologies traditionally adopted to energize these sensors and gather the data from them. In one, a single data logger and power source are used. Dedicated cables radiate out from the logger to supply power to each of the probes and retrieve analog signals. In the other layout, a standalone data logger is located at each monitored tree. Batteries must then be distributed throughout the plot to service these loggers. We present a hybrid solution based on industrial control systems that employs a central data logger and battery, but co-locates digitizing hardware with the sensors at each tree. Each hardware node is able to communicate and share power over wire links with neighboring nodes. The resulting network provides a fault-tolerant path between the logger and each sensor. The approach is optimized to limit disturbance of the study plot, protect signal integrity and to enhance system reliability. This open-source implementation is built on the Arduino micro-controller system and employs RS485 and Modbus communications protocols. It is supported by laptop based management software coded in Python. The system is designed to be readily fabricated and programmed by non-experts. It works with a variety of sap-flux measurement techniques and it is able to interface to additional environmental sensors.

Commercial activities and subsistence utilization of mangrove forests around the Wouri estuary and the Douala-Edea reserve (Cameroon).

PubMed

Atheull, Adolphe Nfotabong; Din, Ndongo; Longonje, Simon N; Koedam, Nico; Dahdouh-Guebas, Farid

2009-11-17

Worldwide there is growing research interest in the ethnobiology of mangrove forests. Notwithstanding that, little information has been published about ethnobiology of mangrove forests in Cameroon. The aims of this study were a) to analyze the harvesting methods and the local selling of mangrove wood products by loggers in the vicinity of Wouri estuary and b) to investigate the patterns of subsistence uses of mangrove wood products around the Douala-Edea reserve. Semi-structured interviews were conducted with 120 active mangrove loggers in 23 Douala wood markets and 103 households located in three villages (Mbiako, Yoyo I and Yoyo II) close to Douala-Edea reserve. In each of the three densely populated villages, every second household was chosen for sampling while in all markets, mangrove loggers were chosen randomly. In addition, log diameters were measured in each market using a wooden foldable tape measure. A post hoc analysis (Newman-Keuls test) was performed in order to detect the common wood class diameter sold in the Douala wood markets. The analysis of the loggers' survey data has shown that large logs of Rhizophora with diameter greater than 40 cm were common in the Douala wood markets and were more closely associated with loggers who used chainsaws. In addition to the general mangroves wood products selling, the analysis on a subsistence level (households' survey) suggests the local population's dependence on mangroves, with multiple uses of Rhizophora racemosa Meyer, R. harrisonii Leechman, Avicennia germinans L. Stearn., Laguncularia racemosa Gaertn. f. and Conocarpus erectus L. timbers for furniture, fences, smoking fish, and fuelwood. Finally, Nypa fruticans (Thunb.) Wurmb. leaves were used as thatching material for house walls and roofs. Our findings revealed that big logs of Rhizophora were commonly sold by the loggers. A majority of loggers (60%) reported that mangrove marketed wood constitute a principal source of income. Most of the villagers (85.83%) often depend on mangroves for subsistence needs and for them there is no substitute for mangrove wood. Therefore, more efforts should be undertaken at the national level to implement conservation, management and sustainable use of these coastal forests.

Commercial activities and subsistence utilization of mangrove forests around the Wouri estuary and the Douala-Edea reserve (Cameroon)

PubMed Central

2009-01-01

Background Worldwide there is growing research interest in the ethnobiology of mangrove forests. Notwithstanding that, little information has been published about ethnobiology of mangrove forests in Cameroon. The aims of this study were a) to analyze the harvesting methods and the local selling of mangrove wood products by loggers in the vicinity of Wouri estuary and b) to investigate the patterns of subsistence uses of mangrove wood products around the Douala-Edea reserve. Methods Semi-structured interviews were conducted with 120 active mangrove loggers in 23 Douala wood markets and 103 households located in three villages (Mbiako, Yoyo I and Yoyo II) close to Douala-Edea reserve. In each of the three densely populated villages, every second household was chosen for sampling while in all markets, mangrove loggers were chosen randomly. In addition, log diameters were measured in each market using a wooden foldable tape measure. A post hoc analysis (Newman-Keuls test) was performed in order to detect the common wood class diameter sold in the Douala wood markets. Results The analysis of the loggers' survey data has shown that large logs of Rhizophora with diameter greater than 40 cm were common in the Douala wood markets and were more closely associated with loggers who used chainsaws. In addition to the general mangroves wood products selling, the analysis on a subsistence level (households' survey) suggests the local population's dependence on mangroves, with multiple uses of Rhizophora racemosa Meyer, R. harrisonii Leechman, Avicennia germinans L. Stearn., Laguncularia racemosa Gaertn. f. and Conocarpus erectus L. timbers for furniture, fences, smoking fish, and fuelwood. Finally, Nypa fruticans (Thunb.) Wurmb. leaves were used as thatching material for house walls and roofs. Conclusion Our findings revealed that big logs of Rhizophora were commonly sold by the loggers. A majority of loggers (60%) reported that mangrove marketed wood constitute a principal source of income. Most of the villagers (85.83%) often depend on mangroves for subsistence needs and for them there is no substitute for mangrove wood. Therefore, more efforts should be undertaken at the national level to implement conservation, management and sustainable use of these coastal forests. PMID:19919680

Effect of core body temperature, time of day, and climate conditions on behavioral patterns of lactating dairy cows experiencing mild to moderate heat stress.

PubMed

Allen, J D; Hall, L W; Collier, R J; Smith, J F

2015-01-01

Cattle show several responses to heat load, including spending more time standing. Little is known about what benefit this may provide for the animals. Data from 3 separate cooling management trials were analyzed to investigate the relationship between behavioral patterns in lactating dairy cows experiencing mild to moderate heat stress and their body temperature. Cows (n=157) were each fitted with a leg data logger that measured position and an intravaginal data logger that measures core body temperature (CBT). Ambient conditions were also collected. All data were standardized to 5-min intervals, and information was divided into several categories: when standing and lying bouts were initiated and the continuance of each bout (7,963 lying and 6,276 standing bouts). In one location, cows were continuously subjected to heat-stress levels according to temperature-humidity index (THI) range (THI≥72). The THI range for the other 2 locations was below and above a heat-stress threshold of 72 THI. Overall and regardless of period of day, cows stood up at greater CBT compared with continuing to stand or switching to a lying position. In contrast, cows lay down at lower CBT compared with continuing to lie or switching to a standing position, and lying bouts lasted longer when cows had lower CBT. Standing bouts also lasted longer when cattle had greater CBT, and they were less likely to lie down (less than 50% of lying bouts initiated) when their body temperature was over 38.8°C. Also, cow standing behavior was affected once THI reached 68. Increasing CBT decreased lying duration and increased standing duration. A CBT of 38.93°C marked a 50% likelihood a cow would be standing. This is the first physiological evidence that standing may help cool cows and provides insight into a communally observed behavioral response to heat. Copyright © 2015 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Technical note: Data loggers are a valid method for assessing the feeding behavior of dairy cows using the Calan Broadbent Feeding System.

PubMed

Krawczel, P D; Klaiber, L M; Thibeau, S S; Dann, H M

2012-08-01

Assessing feeding behavior is important in understanding the effects of nutrition and management on the well-being of dairy cows. Historically, collection of these data from cows fed with a Calan Broadbent Feeding System (American Calan Inc., Northwood, NH) required the labor-intensive practices of direct observation or video review. The objective of this study was to evaluate the agreement between the output of a HOBO change-of-state data logger (Onset Computer Corp., Bourne, MA), mounted to the door shell and latch plate, and video data summarized with continuous sampling. Data (number of feed bin visits per day and feeding time in minutes per day) were recorded with both methods from 26 lactating cows and 10 nonlactating cows for 3 d per cow (n=108). The agreement of the data logger and video methods was evaluated using the REG procedure of SAS to compare the mean response of the methods against the difference between the methods. The maximum allowable difference (MAD) was set at ±3 for bin visits and ±20 min for feeding time. Ranges for feed bin visits (2 to 140 per d) and feeding time (28 to 267 min/d) were established from video data. Using the complete data set, agreement was partially established between the data logger and video methods for feed bin visits, but not established for feeding time. The complete data set generated by the data logger was screened to remove visits of a duration ≤3 s, reflecting a cow unable to enter a feed bin (representing 7% of all data) and ≥5,400 s, reflecting a failure of the data logger to align properly with its corresponding magnetic field (representing <1% of all data). Using the resulting screened data set, agreement was established for feed bin visits and feeding time. For bin visits, 4% of the data was beyond the MAD. For feeding time, 3% of the data was beyond the MAD and 74% of the data was ±1 min. The insignificant P-value, low coefficient of determination, and concentration of the data within the MAD indicate the agreement of the change-of-state data logger and video data. This suggests the usage of a change-of-state data logger to assess the feeding behavior of cows feeding from a Calan Broadbent Feeding System is appropriate. Use of the screening criteria for data analysis is recommended. Copyright © 2012 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Clinicians’ and researchers’ perspectives on manual wheelchair data loggers

PubMed Central

Routhier, François; Lettre, Josiane; Miller, William C.; Borisoff, Jaimie F.; Keetch, Kate; Mitchell, Ian M.

2017-01-01

Recent studies have employed data loggers to record a wide range of, sometimes differing, objective outcomes associated with the use of manual wheelchairs. To identify which outcomes are broadly perceived to be the most important to measure when objectively documenting manual wheelchair use, a cross-sectional survey was conducted with groups of researchers and clinicians in the field of wheeled mobility. We also surveyed the challenges these groups experienced when using data loggers. The survey was informed by a previous scoping review of the scientific and gray literature. Seventy-four people, with various academic and professional backgrounds, completed the survey: 57 researchers (77.0%) and 17 clinicians (23.0%). Regarding the importance they attributed to commonly measured outcomes, the most highly rated outcome identified by both groups was “distance traveled.” There were significant differences between the groups’ perspectives in rating and ranking the importance of “pressure-relief activities”, “seat pressure” and “acceleration.” In terms of challenges or barriers associated with the use of data loggers for monitoring manual wheelchair use, it appears that researchers and clinicians have relatively similar needs and preferences. However, only clinicians reported that the time they wanted to, or could, allocate to review recorded information was a potential hardship. Our hope is that these results will help further development and increase the functionality and applicability of data loggers for manual wheelchairs in research and clinical contexts. PMID:28202382

Niphargus: a silicon band-gap sensor temperature logger for high-precision environmental monitoring

NASA Astrophysics Data System (ADS)

Burlet, Christian; Vanbrabant, Yves; Piessens, Kris; Welkenhuysen, Kris; Verheyden, Sophie

2014-05-01

A temperature logger, called 'Niphargus', was developed at the Geological Survey of Belgium to monitor temperature of local natural processes with sensitivity of the order of a few hundredths of degrees to monitor temperature variability in open air, caves, soils and rivers. The newly developed instrument uses a state-of-the-art band-gap silicon temperature sensor with digital output. This sensor reduces the risk of drift associated with thermistor-based sensing devices, especially in humid environments. The Niphargus is designed to be highly reliable, low-cost and powered by a single lithium cell with up to several years autonomy depending on the sampling rate and environmental conditions. The Niphargus was evaluated in an ice point bath experiment in terms of temperature accuracy and thermal inertia. The small size and low power consumption of the logger allow its use in difficult accessible environments, e.g. caves and space-constrained applications, inside a rock in a water stream. In both cases, the loggers have proven to be reliable and accurate devices. For example, spectral analysis of the temperature signal in the Han caves (Belgium) allowed detection and isolation of a 0.005° C amplitude day-night periodic signal in the temperature curve. PIC Figure 1: a Niphargus logger in its standard size. SMD components side. Photo credit: W. Miseur

Initial Geochemistry Data of the Lake Ohrid (Macedonia, Albania) DEEP -Site Sediment Record: The ICDP Scopsco Drilling Project

NASA Astrophysics Data System (ADS)

Francke, A.; Wagner, B.; Sulpizio, R.; Zanchetta, G.; Leicher, N.; Gromig, R.; Krastel, S.; Lindhorst, K.; Wilke, T.

2014-12-01

Ancient lakes, with sediment records spanning >1 million years, are very rare. The UNESCO World Heritage site of Lake Ohrid on the Balkans is thought to be the oldest lake in Europe. With 212 endemic species described to date, it is also a hotspot of evolution. In order to unravel the geological and evolutionary history of the lake, an international group of scientists, conducted a deep drilling campaign in spring 2013 under the umbrella of the ICDP SCOPSCO project (Scientific Collaboration on Past Speciation Conditions in Lake Ohrid). Overall, about 2,100 m of sediments were recovered from four drill sites. At the main drill site (DEEP-site) in central parts of the lake where seismic data indicated a maximum sediment fill of ca. 700 m, a total of more than 1,500 m of sediments were recovered until a penetration depth of 569 m. Currently, core opening, core description, XRF and MSCL scanning, sub-sampling (16 cm resolution), and inorganic and organic geochemical as well as sedimentological analyses of the sediment cores from the DEEP site are in progress at the University of Cologne. Previous studies at Lake Ohrid have shown that interglacial periods are characterized by high TIC and TOC contents, likely associated with high contents of calcite and organic matter in the sediments. In contrast, during glacial periods negligible TIC and low TOC contents correspond to high K counts indicating enhanced supply of clastic material. Similar patterns can be observed in the biogeochemical analyses of the subsamples and in the XRF data of the DEEP site record. Following these variations on a glacial-interglacial time scale, TIC and TOC data obtained from the subsamples and from core catcher samples indicate that the DEEP site sequence provides a 1.2 million year old continuous record of environmental and climatological variability in the Balkan Region. The age control can be further improved by first findings of macroscopic tephra horizons. Peaks in K, Sr, Zr, and magnetic susceptibility might indicate the occurrence of additional cryptotephra layers in the sediment sequence.

Dynamics, rate and nature of retreat of the British Irish Ice-Sheet offshore of NW Ireland following the Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Weilbach, K.; O'Cofaigh, C.; Lloyd, J. M.; Benetti, S.; Dunlop, P.

2016-12-01

Recent studies of the British and Irish Ice Sheet (BIIS) have identified evidence of ice extending to the continental shelf edge along the western margin of the ice sheet off NW Ireland. While this advance is assumed to have occurred during the LGM, exact timing of maximum advance, and the timing and nature of the subsequent retreat is not well constrained. The location of the north-western sector of the BIIS adjacent to the North Atlantic makes this area ideal to study the ice sheet dynamics of a major marine terminating ice sheet, and the rate and nature of its retreat following the LGM. High resolution swath bathymetry and sub-bottom profiler (SBP) data along with sedimentological, micropalaeontological and geochronological investigations of sediment cores, collected across the NW Irish shelf, have been used to establish the extent, timing and nature of retreat of this sector of the BIIS. Swath bathymetry show glacial landforms on the shelf, and SBP-data along with twenty seven vibro-cores were collected in east-west oriented transects across a series of arcuate recessional moraines stretching from the shelf edge to Donegal Bay. These moraines record progressive still stands of a lobate ice margin during its retreat from the shelf edge, and are therefore ideal for the investigation of ice-sheet dynamics and chronology during retreat. Twenty two radiocarbon dates from foraminifera and macrofossils, sampled from the sediment cores, indicate that maximum ice sheet extent occurred around 26200 y cal BP, with an initial rapid retreat across the shelf. Visual logging, X-ray imagery, MSCL data and palaeoenvironmental analyses of the sediment cores, indicate that retreat happened in a glacimarine environment, and was punctuated by multiple stillstands and possible readvances across the mid and inner shelf, forming the arcuate moraines. The radiocarbon dates suggest that final retreat occurred after 17857 y. cal BP, which is consistent with onshore cosmogenic exposure ages from NW Ireland, showing de-glaciation around 17400 y cal BP.

Loggers' Views on Training After Attending a Three-Day Educational Program.

ERIC Educational Resources Information Center

Reeb, James E.

1996-01-01

Surveyed 120 loggers who attended a 3-day educational program on first aid and adult cardiopulmonary resuscitation, forest ecology and silviculture, woods safety, and small business management. Results indicate that the training was worthwhile to the participants and they would be willing to attend additional training. (JRH)

Turbidity threshold sampling for suspended sediment load estimation

Treesearch

Jack Lewis; Rand Eads

2001-01-01

Abstract - The paper discusses an automated procedure for measuring turbidity and sampling suspended sediment. The basic equipment consists of a programmable data logger, an in situ turbidimeter, a pumping sampler, and a stage-measuring device. The data logger program employs turbidity to govern sample collection during each transport event. Mounting configurations and...

Characteristics of West Virginia loggers during economically difficult times

Treesearch

Ben Spong; Jinxing Wang; David Summerfield

2011-01-01

West Virginia licensed loggers have been surveyed over the years regarding their business, operational, and personal characteristics. An update of this study was completed in 2009 to illustrate the impacts of the current economic conditions on the forestry and forest products industries. Additionally, this survey will help demonstrate the preparedness of the logging...

A portable system for characterizing wildland fire behavior

Treesearch

Bret Butler; D. Jimenez; J. Forthofer; K. Shannon; Paul Sopko

2010-01-01

A field deployable system for quantifying energy and mass transport in wildland fires is described. The system consists of two enclosures: The first is a sensor/data logger combination package that allows characterization of convective/radiant energy transport in fires. This package contains batteries, a programmable data logger, sensors, and other electronics. The...

Improving temperature monitoring in the vaccine cold chain at the periphery: an intervention study using a 30-day electronic refrigerator temperature logger (Fridge-tag).

PubMed

Kartoğlu, Umit; Nelaj, Erida; Maire, Denis

2010-05-28

This intervention study was conducted in Albania to establish the superiority of the Fridge-tag (30-day electronic refrigerator temperature logger) against thermometers. Intervention sites used Fridge-tag and a modified temperature control record sheet, while control sites continued with their routine operation with thermometers. All refrigerators in both groups were equipped with downloadable electronic data loggers to record temperatures for reference. Focus group sessions were conducted with involved staff to discuss temperature monitoring, Fridge-tag use and its user-friendliness. Significant discrepancies were observed between thermometer readings and the electronic data loggers in control sites, while all alarms from Fridge-tag were confirmed in the intervention group. Thermometers are not sufficient to monitor temperatures in refrigerators since they miss the great majority of low and high alarms. Fridge-tag has proven to be an effective tool in providing health workers with the information they need to take the necessary actions when there are refrigerator temperature variations. (c) 2010 Elsevier Ltd. All rights reserved.

The hydraulic connectivity, perennial warming and relationship to seismicity of the Davis-Schrimpf Seep Field, Salton Trough, California from new and recent temperature time-series

NASA Astrophysics Data System (ADS)

Rao, Amar P.

The Davis-Schrimpf Seep Field is a cluster of about 50 transtension-related geothermal seeps in the Imperial Valley, southeastern California. Five temperature time-series were collected from four features and compared to one another, against prior time-series, and to local seismicity. Loggers placed in separate vents within one seep returned moderate anti-correlation. Vents may selectively clog and unclog. Clogging frequencies explaining the observed level of negative correlation were given. Loggers placed in the same vent produced 87-92% positive correlation. It is therefore likely that the vast majority of temperature data measured with loggers possesses meaningful accuracy. Loggers placed in separate seeps exhibited correlation close to or greater than the statistically significant 60% threshold. I propose two lineaments provide a hydraulic connection between these seeps. Two Mw>3.0 earthquake swarms, including one Mw>4.0 event, within 24 kilometers showed possible linkage with >5 degree Celsius temperature perturbations. Seepage warmed 14.5-36.8 degrees Celsius over 5-7 years.

Gating Mechanisms of Mechanosensitive Channels of Large Conductance, I: A Continuum Mechanics-Based Hierarchical Framework

PubMed Central

Chen, Xi; Cui, Qiang; Tang, Yuye; Yoo, Jejoong; Yethiraj, Arun

2008-01-01

A hierarchical simulation framework that integrates information from molecular dynamics (MD) simulations into a continuum model is established to study the mechanical response of mechanosensitive channel of large-conductance (MscL) using the finite element method (FEM). The proposed MD-decorated FEM (MDeFEM) approach is used to explore the detailed gating mechanisms of the MscL in Escherichia coli embedded in a palmitoyloleoylphosphatidylethanolamine lipid bilayer. In Part I of this study, the framework of MDeFEM is established. The transmembrane and cytoplasmic helices are taken to be elastic rods, the loops are modeled as springs, and the lipid bilayer is approximated by a three-layer sheet. The mechanical properties of the continuum components, as well as their interactions, are derived from molecular simulations based on atomic force fields. In addition, analytical closed-form continuum model and elastic network model are established to complement the MDeFEM approach and to capture the most essential features of gating. In Part II of this study, the detailed gating mechanisms of E. coli-MscL under various types of loading are presented and compared with experiments, structural model, and all-atom simulations, as well as the analytical models established in Part I. It is envisioned that such a hierarchical multiscale framework will find great value in the study of a variety of biological processes involving complex mechanical deformations such as muscle contraction and mechanotransduction. PMID:18390626

Estradiol alters body temperature regulation in the female mouse.

PubMed

Krajewski-Hall, Sally J; Blackmore, Elise M; McMinn, Jessi R; Rance, Naomi E

2018-01-01

Hot flushes are due to estrogen withdrawal and characterized by the episodic activation of heat dissipation effectors. Recent studies (in humans and rats) have implicated neurokinin 3 (NK 3 ) receptor signaling in the genesis of hot flushes. Although transgenic mice are increasingly used for biomedical research, there is limited information on how 17β-estradiol and NK 3 receptor signaling alters thermoregulation in the mouse. In this study, a method was developed to measure tail skin temperature (T SKIN ) using a small data-logger attached to the surface of the tail, which, when combined with a telemetry probe for core temperature (T CORE ), allowed us to monitor thermoregulation in freely-moving mice over long durations. We report that estradiol treatment of ovariectomized mice reduced T CORE during the light phase (but not the dark phase) while having no effect on T SKIN or activity. Estradiol also lowered T CORE in mice exposed to ambient temperatures ranging from 20 to 36°C. Unlike previous studies in the rat, estradiol treatment of ovariectomized mice did not reduce T SKIN during the dark phase. Subcutaneous injections of an NK 3 receptor agonist (senktide) in ovariectomized mice caused an acute increase in T SKIN and a reduction in T CORE , consistent with the activation of heat dissipation effectors. These changes were reduced by estradiol, suggesting that estradiol lowers the sensitivity of central thermoregulatory pathways to NK 3 receptor activation. Overall, we show that estradiol treatment of ovariectomized mice decreases T CORE during the light phase, reduces the thermoregulatory effects of senktide and modulates thermoregulation differently than previously described in the rat.

Late Quaternary paleohydrology deduced from new marine sediment cores taken on the proximal Amazon continental margin

NASA Astrophysics Data System (ADS)

Nace, T.; Baker, P. A.; Dwyer, G. S.; Hollander, D. J.; Silva, C. G.

2010-12-01

Throughout the late Quaternary the Amazon Basin has been influenced by abrupt North-South climate forcing and has undergone several large climate variations as recorded in previously reported speleothem records. Despite its importance in the global carbon cycle there are few continuous, high-resolution records of the Amazon Basin that date back to and beyond the last glacial period. In this study, we report the first results of a marine geological expedition to the Amazon continental shelf and fan region. During this expedition we collected eight ~30 meter piston cores along with gravity, box and multicores. At both sites we undertook complementary multibeam and high resolution seismic reflection profiling. Analyses will be presented from two sets of box/gravity/piston cores. One core (32m) is from a high sedimentation site on the northern flank of the main submarine canyon within the Amazon Fan complex at 1700m water depth. The other core (30m) is located on a seamount to the south of the Amazon Fan complex at 3100m water depth. A mixed assemblage of foraminifera is used for 14C dating to obtain an age model and bulk organic geochemistry is analyzed to determine percent organic carbon, C/N ratios, δ13C and δ15N. The cores were continuously measured shipboard for magnetic susceptibility and gamma density using a GEOTEK logger. These findings uncover the contribution of pelagic and terrestrial organic matter, whether the terrigenous carbon is derived from C3 versus C4 vegetation, and whether the marine organic matter is composed of phytoplankton or marine algae.

Clinicians' and Researchers' Perspectives on Manual Wheelchair Data Loggers.

PubMed

Routhier, François; Lettre, Josiane; Miller, William C; Borisoff, Jaimie F; Keetch, Kate; Mitchell, Ian M

2017-07-01

Recent studies have used data loggers to record a wide range of, sometimes differing, objective outcomes associated with the use of manual wheelchairs. To identify which outcomes are broadly perceived to be the most important to measure when objectively documenting manual wheelchair use, a cross-sectional survey was conducted with groups of researchers and clinicians in the field of wheeled mobility. We also surveyed the challenges these groups experienced when using data loggers. The survey was informed by a previous scoping review of the scientific and gray literature. Seventy-four people with various academic and professional backgrounds completed the survey: 57 researchers (77.0%) and 17 clinicians (23.0%). Regarding the importance they attributed to commonly measured outcomes, the most highly rated outcome identified by both groups was "distance traveled." There were significant differences between the groups' perspectives in rating and ranking the importance of "pressure-relief activities," "seat pressure," and "acceleration." In terms of challenges or barriers associated with the use of data loggers for monitoring manual wheelchair use, it appears that researchers and clinicians have relatively similar needs and preferences. However, only clinicians reported that the time they wanted to, or could, allocate to review recorded information was a potential hardship. Our hope is that these results will help further development and increase the functionality and applicability of data loggers for manual wheelchairs in research and clinical contexts. Copyright © 2017 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

Working safely in summertime heat

Treesearch

Robert B. Rummer

1997-01-01

As logging operations continue in the hotter months of he year, the safety hazard of heat stress appears. Loggers are particularly at risk, because the combination of hard physical work and outdoor conditions puts high demands on the body. While loggers rarely die from heat stress, they may suffer heat illness symptoms ranging from the discomfort of heat rash to nausea...

The Role of Communicative Feedback in Successful Water Conservation Programs

ERIC Educational Resources Information Center

Tom, Gail; Tauchus, Gail; Williams, Jared; Tong, Stephanie

2011-01-01

The Sacramento County Water Agency has made available 2 water conservation programs to its customers. The Data Logger Program attaches the Meter Master Model 100 EL data logger to the customer's water meter for 1 week and provides a detailed report of water usage from each fixture. The Water Wise House Call Program provides findings and…

Impact of a Professional Development Program Using Data-Loggers on Science Teachers' Attitudes towards Inquiry-Based Teaching

ERIC Educational Resources Information Center

Tosa, Sachiko; Martin, Fred

2010-01-01

This study examined how a professional development program which incorporates the use of electronic data-loggers could impact on science teachers' attitudes towards inquiry-based teaching. The participants were 28 science or technology teachers who attended workshops offered in the United States and Japan. The professional development program…

Searching for Last Glacial Deep-Sea Polar Carbonates in the Ross Sea Continental slope and Their Relevance to Chronological Constraints

NASA Astrophysics Data System (ADS)

Brambati, A.; Bonaccorsi, R.; Quaia, T.; Busetti, M.

2003-12-01

Ice-proximal glacial marine sediments from the Antarctic continental margin retain ice rafting events as proxy record for change in the volume and extension of the Antarctic ice sheet throughout glacial-interglacial cycles. However, the sedimentary sequences from the Ross Sea continental margin remain relatively poorly understood and most research has been focused mainly on continental shelf sequences during the last past decades. We present a data set (i.e., X-ray lithology, Multi Sensor Core Logger physical data, and preservation of biogenic carbonates), obtained from six deep-sea cores (1991-1999 Italian Antarctic Research Programme, PNRA - Summer cruises). Specifically, the cores were collected from a) the central Eastern sector (i.e., Core ANTA95-89C, depth: 2056 m, length: 401 cm and Core ANTA99-c22, depth: 2650 m, length: 851 cm); b) the central Western sector (i.e., Core ANTA99-c23; water depth: 2158 m, length: 548 cm; and ANTA99-c24, water depth: 2750 m, length: 811 cm); and c) the North Western sector (i.e., Core ANTA91-08C, and ANTA91-02C) of the Ross Sea Continental slope. Well-preserved calcareous foraminifers (N. pachyderma, sx) in coarse-grained IRD materials sparsely occur and/or are concentrated in discrete layers (i.e., up to 22 cm-thick) of at least three cores (i.e., Cores ANTA91-08, ANTA91-02, and ANTA95-89C, e.g., at 217-238 cm-depth). Some carbonate layers were deposited during a period of time bracketing Stage3/Stage2. In Core 89C foraminifers are associated to multiple ice rafting episodes and likely occurred with oceanographic changes in the properties of slope water masses. The search of well-preserved, in situ-deposited, polar carbonates is demanded for a reliable C-14 AMS dating of late Pleistocene events in the Ross Sea.

Wireless monitoring of highways

NASA Astrophysics Data System (ADS)

Bennett, Richard; Hayes-Gill, Barrie; Crowe, John A.; Armitage, Robert; Rodgers, Dale; Hendroff, Adrian

1999-05-01

Electronic hardware has been developed to telemetrically transmit temperature and strain measurements from within a public highway in the UK. These measurements provide an important health check for monitoring fatigue damage in pavements. Previous attempts at measuring strain and temperature have required lengths of cable to be installed in the highway. The installation of these cables is both expensive and damaging to the pavement and provides potentially unreliable electrical connections. The new systems consist of a retrofitted instrumented asphalt core which is bonded into the pavement structure. The core contains all the electronics necessary to record two temperatures and two strains. An analogue front end provides signal conditioning which is digitized and passed to microcontroller for endcoding. From there the data is transmitted via a low power radio link to a receiver and data logger positioned by the side of the road. The system has an in-situ operating life of 6 months on AA alkaline batteries. Results are presented of power management and fault tolerant radio protocol techniques, long term temperature variations, dynamic strain measurements within the highway, and RF transmission capabilities through a layer of asphalt.

Production and Costs of the Chambers Delimbinator in First Thinning of Pine Plantations

Treesearch

Scott T. Mooney; Kevin D. Boston; W. Dale Greene

2000-01-01

Production and quality measures were collected and analyzed for a new chain-flail delimbing machine, Chambers Delimbinator, on two operations in central and southwestern Georgia. The first operation, Logger A, used two skidders and one loader while the second operation, Logger B, used two skidder and two loaders. Lobber B with the lower cycle time and larger piece...

Potential for shared log transport services

Treesearch

Tim McDonald; Steve Taylor; Jorge Valenzuela

2001-01-01

A simulation model of a log transport logistics network was developed. The model could be structured to either share truck capacity among a group of loggers, or to assign a fixed number of trucks to individual loggers. Another variation of the model allowed the use of a staging yard to set out loaded trailers and deliver them to destinations using dedicated shuttle...

An inexpensive and reliable monitoring station design for use with lightweight, compact data loggers

Treesearch

Ronald S., Jr. Zalesny; Adam H. Wiese; Edmund O. Bauer; William L., Jr. Headlee; Richard B. Hall; A. Assibi Mahama; Jill A. Zalesny

2007-01-01

We designed, constructed, and field-tested an inexpensive and reliable monitoring station that can be used with lightweight, compact data loggers. We feel this design, improved three times over 6 yr, could benefit anyone in nursery or field settings interested in acquiring environmental data. We provide step-by-step instructions on the construction of the monitoring...

Core-temperature sensor ingestion timing and measurement variability.

PubMed

Domitrovich, Joseph W; Cuddy, John S; Ruby, Brent C

2010-01-01

Telemetric core-temperature monitoring is becoming more widely used as a noninvasive means of monitoring core temperature during athletic events. To determine the effects of sensor ingestion timing on serial measures of core temperature during continuous exercise. Crossover study. Outdoor dirt track at an average ambient temperature of 4.4°C ± 4.1°C and relative humidity of 74.1% ± 11.0%. Seven healthy, active participants (3 men, 4 women; age  =  27.0 ± 7.5 years, height  =  172.9 ± 6.8 cm, body mass  =  67.5 ± 6.1 kg, percentage body fat  =  12.7% ± 6.9%, peak oxygen uptake [Vo(2peak)]  =  54.4 ± 6.9 mL•kg⁻¹•min⁻¹) completed the study. Participants completed a 45-minute exercise trial at approximately 70% Vo(2peak). They consumed core-temperature sensors at 24 hours (P1) and 40 minutes (P2) before exercise. Core temperature was recorded continuously (1-minute intervals) using a wireless data logger worn by the participants. All data were analyzed using a 2-way repeated-measures analysis of variance (trial × time), Pearson product moment correlation, and Bland-Altman plot. Fifteen comparisons were made between P1 and P2. The main effect of time indicated an increase in core temperature compared with the initial temperature. However, we did not find a main effect for trial or a trial × time interaction, indicating no differences in core temperature between the sensors (P1  =  38.3°C ± 0.2°C, P2  =  38.3°C ± 0.4°C). We found no differences in the temperature recordings between the 2 sensors. These results suggest that assumed sensor location (upper or lower gastrointestinal tract) does not appreciably alter the transmission of reliable and repeatable measures of core temperature during continuous running in the cold.

A new data logger for integrated geophysical monitoring

NASA Astrophysics Data System (ADS)

Orazi, Massimo; Peluso, Rosario; Caputo, Antonio; Giudicepietro, Flora; Martini, Marcello

2015-04-01

GILDA digital recorder is a data logger developed at Osservatorio Vesuviano (INGV). It provides excellent data quality with low power consumption and low production cost. It is widely used in the multi-parametric monitoring networks of Neapolitan volcanoes and Stromboli volcano. We have improved the characteristics of GILDA recorder to realize a robust user-oriented acquisition system for integrated geophysical monitoring. We have designed and implemented new capabilities concerning the use of the low rate channels to get data of environmental parameters of the station. We also improved the stand-alone version of the data logger. This version can be particularly useful for scientific experiments and to rapidly upgrade permanent monitoring networks. Furthermore, the local storage can be used as back-up for the monitoring systems in continuous transmission, in case of failure of the transmission system. Some firmware changes have been made in order to improve the performance of the instrument. In particular, the low rate acquisition channels were conditioned to acquire internal parameters of the recorder such as the temperature and voltage. A prototype of the new version of the logger is currently installed at Campi Flegrei for a experimental application. Our experiment is aimed at testing the new version of GILDA data logger in multi-board configuration for multiparametric acquisitions. A second objective of the experiment is the comparison of the recorded data with geochemical data acquired by a multiparametric geochemical station to investigate possible correlations between seismic and geochemical parameters. The target site of the experiment is "Bocca Grande" fumarole in Solfatara volcano. By exploiting the modularity of GILDA, for the experiment has been realized an acquisition system based on three dataloggers for a total of 12 available channels. One of GILDA recorders is the Master and the other two are Slaves. The Master is responsible for the initial configuration of the GPS receiver for timing data. The two data loggers configured in slave mode await the end of the initial configuration and then receive the GPS timing data and PPS from the Master. This allows you to use one GPS receiver and optimize power consumption. The whole system is configured to continuously transmit data via WiFi and to locally store data.

The mechanoelectrical response of the cytoplasmic membrane of Vibrio cholerae.

PubMed

Rowe, Ian; Elahi, Merina; Huq, Anwar; Sukharev, Sergei

2013-07-01

Persistence of Vibrio cholerae in waters of fluctuating salinity relies on the capacity of this facultative enteric pathogen to adapt to varying osmotic conditions. In an event of osmotic downshift, osmolytes accumulated inside the bacterium can be quickly released through tension-activated channels. With the newly established procedure of giant spheroplast preparation from V. cholerae, we performed the first patch-clamp characterization of its cytoplasmic membrane and compared tension-activated currents with those in Esherichia coli. Saturating pressure ramps revealed two waves of activation belonging to the ∼1-nS mechanosensitive channel of small conductance (MscS)-like channels and ∼3-nS mechanosensitive channel of large conductance (MscL)-like channels, with a pressure midpoint ratio p0.5MscS/p0.5MscL of 0.48. We found that MscL-like channels in V. cholerae present at a density three times higher than in E. coli, and yet, these vibrios were less tolerant to large osmotic downshocks. The Vibrio MscS-like channels exhibit characteristic inward rectification and subconductive states at depolarizing voltages; they also adapt and inactivate at subsaturating tensions and recover within 2 s upon tension release, just like E. coli MscS. Trehalose, a compatible internal osmolyte accumulated under hypertonic conditions, significantly shifts activation curves of both MscL- and MscS-like channels toward higher tensions, yet does not freely partition into the channel pore. Direct electrophysiology of V. cholerae offers new avenues for the in situ analysis of membrane components critical for osmotic survival and electrogenic transport in this pathogen.

The mechanoelectrical response of the cytoplasmic membrane of Vibrio cholerae

PubMed Central

Rowe, Ian; Elahi, Merina; Huq, Anwar

2013-01-01

Persistence of Vibrio cholerae in waters of fluctuating salinity relies on the capacity of this facultative enteric pathogen to adapt to varying osmotic conditions. In an event of osmotic downshift, osmolytes accumulated inside the bacterium can be quickly released through tension-activated channels. With the newly established procedure of giant spheroplast preparation from V. cholerae, we performed the first patch-clamp characterization of its cytoplasmic membrane and compared tension-activated currents with those in Esherichia coli. Saturating pressure ramps revealed two waves of activation belonging to the ∼1-nS mechanosensitive channel of small conductance (MscS)-like channels and ∼3-nS mechanosensitive channel of large conductance (MscL)-like channels, with a pressure midpoint ratio p0.5MscS/p0.5MscL of 0.48. We found that MscL-like channels in V. cholerae present at a density three times higher than in E. coli, and yet, these vibrios were less tolerant to large osmotic downshocks. The Vibrio MscS-like channels exhibit characteristic inward rectification and subconductive states at depolarizing voltages; they also adapt and inactivate at subsaturating tensions and recover within 2 s upon tension release, just like E. coli MscS. Trehalose, a compatible internal osmolyte accumulated under hypertonic conditions, significantly shifts activation curves of both MscL- and MscS-like channels toward higher tensions, yet does not freely partition into the channel pore. Direct electrophysiology of V. cholerae offers new avenues for the in situ analysis of membrane components critical for osmotic survival and electrogenic transport in this pathogen. PMID:23797422

Performance and Accuracy of Lightweight and Low-Cost GPS Data Loggers According to Antenna Positions, Fix Intervals, Habitats and Animal Movements

PubMed Central

Forin-Wiart, Marie-Amélie; Hubert, Pauline; Sirguey, Pascal; Poulle, Marie-Lazarine

2015-01-01

Recently developed low-cost Global Positioning System (GPS) data loggers are promising tools for wildlife research because of their affordability for low-budget projects and ability to simultaneously track a greater number of individuals compared with expensive built-in wildlife GPS. However, the reliability of these devices must be carefully examined because they were not developed to track wildlife. This study aimed to assess the performance and accuracy of commercially available GPS data loggers for the first time using the same methods applied to test built-in wildlife GPS. The effects of antenna position, fix interval and habitat on the fix-success rate (FSR) and location error (LE) of CatLog data loggers were investigated in stationary tests, whereas the effects of animal movements on these errors were investigated in motion tests. The units operated well and presented consistent performance and accuracy over time in stationary tests, and the FSR was good for all antenna positions and fix intervals. However, the LE was affected by the GPS antenna and fix interval. Furthermore, completely or partially obstructed habitats reduced the FSR by up to 80% in households and increased the LE. Movement across habitats had no effect on the FSR, whereas forest habitat influenced the LE. Finally, the mean FSR (0.90 ± 0.26) and LE (15.4 ± 10.1 m) values from low-cost GPS data loggers were comparable to those of built-in wildlife GPS collars (71.6% of fixes with LE < 10 m for motion tests), thus confirming their suitability for use in wildlife studies. PMID:26086958

Programmable Off-The-Shelf cell-enabled GPS loggers optimized for retrieving after being used as a float in large river experiments.

NASA Astrophysics Data System (ADS)

Hut, Rolf; Bogaard, Thom

2017-04-01

Throwing something in a river and seeing how fast it floats downstream is the first thing that every hydrologists does when encountering a new river. Using a collection of floats allows estimation of gauge surface water velocity and dispersion characteristics. To use floats over long (hundreds of kilometers) stretches of river requires either a crew that keeps an eye on the floats (labor intensive) or having high-tech floats that upload their location on regular intervals, such that they can be retrieved at the end of the experiment. GPS floats with communication units have been custom build by scientists before. Connecting GPS units to GSM modems used to require deep knowledge on micro-electronics and network protocols. In this work we present a version that is build using only off-the-shelf electronics that require no deep knowledge of either micro electronics nor network protocols. The new cellular enabled Particle Electron development board made it possible to connect a Sparkfun OpenLog (SD-card based logger) to a GPS tracker with no soldering and little programming. Because scientist can program the device themselves, settings like sample time can be adapted to the needs of specific experiments and additional sensors can be easily added. When writing GPS location every minute to SD and reporting every fifteen minutes online, our logger can run for three days on a single 2200 mAh LiPo battery (provided with the Particle Electron). Cost of components for our logger is less than 150. The durability of our GPS loggers will be tested during a field campaign at the end of January 2017 where 15 floats will float down the Irrawaddy river over a length of more than 200 km, during two days.

Surgical implantation of temperature-sensitive transmitters and data-loggers to record body temperature in koalas (Phascolarctos cinereus).

PubMed

Adam, D; Johnston, S D; Beard, L; Nicholson, V; Lisle, A; Gaughan, J; Larkin, R; Theilemann, P; Mckinnon, A; Ellis, W

2016-01-01

Under predicted climate change scenarios, koala distribution in Australia is expected to be adversely affected. Recent studies have attempted to identify suitable habitat, based on models of bioclimatic regions, but to more accurately reflect the thermal tolerance and behavioural adaptations of the various regional populations, the koala's response to periods of heat stress will need to be investigated at the individual animal level. To explore the safety and suitability of temperature-sensitive intra-abdominal implants for monitoring core body temperature in the koala. A temperature-sensitive radio transmitter and thermal iButton data-logger, waxed together as a package, were surgically implanted into the abdominal cavity of four captive koalas. In one animal the implant was tethered and in the other three, it was left free-floating. After 3 months, the implants were removed and all four koalas recovered without complications. The tethering of the package in the one koala resulted in minor inflammation and adhesion, so this practice was subsequently abandoned. The free-floating deployments were complication-free and revealed a diurnal body temperature rhythm, with daily ranges of 0.4-2.8°C. The minimum recorded body temperature was 34.2°C and the maximum was 37.7°C. The difference in the readings obtained from the transmitters and iButtons never exceeded 0.3°C. The suitability of the surgical approach was confirmed, from both the animal welfare and data collection points of view. © 2016 Australian Veterinary Association.

The validity, reliability, and utility of the iButton® for measurement of body temperature circadian rhythms in sleep/wake research.

PubMed

Hasselberg, Michael J; McMahon, James; Parker, Kathy

2013-01-01

Changes in core body temperature due to heat transfer through the skin have a major influence on sleep regulation. Traditional measures of skin temperature are often complicated by extensive wiring and are not practical for use in normal living conditions. This review describes studies examining the reliability, validity and utility of the iButton®, a wireless peripheral thermometry device, in sleep/wake research. A review was conducted of English language literature on the iButton as a measure of circadian body temperature rhythms associated with the sleep/wake cycle. Seven studies of the iButtton as a measure of human body temperature were included. The iButton was found to be a reliable and valid measure of body temperature. Its application to human skin was shown to be comfortable and tolerable with no significant adverse reactions. Distal skin temperatures were negatively correlated with sleep/wake activity, and the temperature gradient between the distal and proximal skin (DPG) was identified as an accurate physiological correlate of sleep propensity. Methodological issues included site of data logger placement, temperature masking factors, and temperature data analysis. The iButton is an inexpensive, wireless data logger that can be used to obtain a valid measurement of human skin temperature. It is a practical alternative to traditional measures of circadian rhythms in sleep/wake research. Further research is needed to determine the utility of the iButton in vulnerable populations, including those with neurodegenerative disorders and memory impairment and pediatric populations. Copyright © 2011 Elsevier B.V. All rights reserved.

Methods for accurate cold-chain temperature monitoring using digital data-logger thermometers

NASA Astrophysics Data System (ADS)

Chojnacky, M. J.; Miller, W. M.; Strouse, G. F.

2013-09-01

Complete and accurate records of vaccine temperature history are vital to preserving drug potency and patient safety. However, previously published vaccine storage and handling guidelines have failed to indicate a need for continuous temperature monitoring in vaccine storage refrigerators. We evaluated the performance of seven digital data logger models as candidates for continuous temperature monitoring of refrigerated vaccines, based on the following criteria: out-of-box performance and compliance with manufacturer accuracy specifications over the range of use; measurement stability over extended, continuous use; proper setup in a vaccine storage refrigerator so that measurements reflect liquid vaccine temperatures; and practical methods for end-user validation and establishing metrological traceability. Data loggers were tested using ice melting point checks and by comparison to calibrated thermocouples to characterize performance over 0 °C to 10 °C. We also monitored logger performance in a study designed to replicate the range of vaccine storage and environmental conditions encountered at provider offices. Based on the results of this study, the Centers for Disease Control released new guidelines on proper methods for storage, handling, and temperature monitoring of vaccines for participants in its federally-funded Vaccines for Children Program. Improved temperature monitoring practices will ultimately decrease waste from damaged vaccines, improve consumer confidence, and increase effective inoculation rates.

Sediment Gravity Flow Deposits Across the Désirade Basin (Lesser Antilles Arc), as Possible Markers of Major Earthquakes

NASA Astrophysics Data System (ADS)

Seibert, C.; Nathalie, F.; Beck, C.; Ratzov, G.; Cattaneo, A.; Moreno, E.; Morena, P.

2017-12-01

The Lesser Antilles arc spreads over 800 km and results from the subduction of American plates below the Caribbean plate, at 2 cm/yr. The earthquake catalog begins in mid-17th century, with only two large reported historical earthquakes: the 1839 Mw8 Martinique and the 1843 Mw8.5 Guadeloupe earthquakes. These estimated magnitudes are however lower than the ones from other subduction areas and the origin of such earthquakes is poorly known and still a matter of debate. The detection of possible megathrust earthquakes and their time-distribution remain a challenge. This study is based on the identification and characterization of co-seismic-turbidites using an approach integrating geophysical data and marine sedimentary archives. A morpho-sedimentary analysis, based on bathymetric, backscatter and chirp data, acquired during the CASEIS cruise in 2016 (doi 10.17600/16001800) and during previous cruises allowed to constrain the sediment transport from the arc towards the forearc basins. We highlighted two distinct areas governed by different transfer modes on the two sides of the arc-perpendicular Désirade normal fault: the northern part, where sediments are transported through canyons on the 20°-steep slope, and the southern part, where all the islands are drained by channels developing on a gentle slope ( 2,5°) from the Quaternary reef platform. Both sides receive sediment from the accretionary prism. Sedimentary processes along the Lesser Antilles arc appear to be driven by both climatic and active tectonic forcings. The 26m-long CAS16-14PC core, was sampled on the Désirade basin which is connected to the shelf by numerous canyons, could contain a mixed sediment record. In addition to shipboard MSCL logging, layering, composition and texture, this core has been investigated through XRF profiles and laser microgranulometry, radiocarbon dating is in process. Preliminary integration of these data and 3,5 kHz seismic profiles suggest possible correlation of thick deposits from sediment gravity flows identified as "turbidites+homogenites" in several core sites. Because of their sedimentological specificities and their widespread distribution, we tentatively interpret them as markers of major earthquakes.

Providing the climatic component in human-climate interaction studies: 550,000 years of climate history in the Chew Bahir basin, a key HSPDP site in southern Ethiopia.

NASA Astrophysics Data System (ADS)

Foerster, V. E.; Asrat, A.; Bronk Ramsey, C.; Chapot, M. S.; Cohen, A. S.; Dean, J. R.; Deocampo, D.; Deino, A. L.; Guenter, C.; Junginger, A.; Lamb, H. F.; Leng, M. J.; Roberts, H. M.; Schaebitz, F.; Trauth, M. H.

2017-12-01

As a contribution towards an enhanced understanding of human-climate interactions, the Hominin Sites and Paleolakes Drilling Project (HSPDP) has cored six predominantly lacustrine archives of climate change spanning much of the last 3.5 Ma in eastern Africa. All six sites in Ethiopia and Kenya are adjacent to key paleoanthropological sites encompassing diverse milestones in human evolution, dispersal, and technological innovation. The 280 m-long Chew Bahir sediment core, recovered from a tectonically-bound basin in the southern Ethiopian rift in late 2014, covers the past 550 ka of environmental history, an interval marked by intense climatic changes and includes the transition to the Middle Stone Age and the origin and dispersal of modern Homo sapiens. We present the outcome of lithologic and stratigraphic investigations, first interpretations of high resolution MSCL and XRF scanning data, and initial results of detailed multi-indicator analysis of the Chew Bahir cores. These analyses are based on more than 14,000 discrete samples, including grain size analyses and X-ray diffraction. An initial chronology, based on Ar/Ar and OSL dating, allows temporal calibration of our reconstruction of dry-wet cycles. Both geochemical and sedimentological data show that the Chew Bahir deposits are sensitive recorders of climate change on millennial to centennial timescales. Initial statistical analyses identify phases marked by abrupt climatic changes, whereas several long-term wet-dry oscillations reveal variations mostly in the precession ( 15-25 kyr), but also in the obliquity ( 40 kyr) and eccentricity frequency bands ( 90-120 kyr). The Chew Bahir record will help decode climate variation on several different time scales, as a consequence of orbitally-driven high-latitude glacial-interglacial shifts and variations in greenhouse gases, Indian and Atlantic Ocean sea-surface temperatures, as well as local solar irradiance. This 550 ka record of environmental change in eastern Africa will ultimately be used to test hypotheses regarding the impact of climate variability on human evolution, dispersal and technological innovation.

From membrane tension to channel gating: A principal energy transfer mechanism for mechanosensitive channels.

PubMed

Zhang, Xuejun C; Liu, Zhenfeng; Li, Jie

2016-11-01

Mechanosensitive (MS) channels are evolutionarily conserved membrane proteins that play essential roles in multiple cellular processes, including sensing mechanical forces and regulating osmotic pressure. Bacterial MscL and MscS are two prototypes of MS channels. Numerous structural studies, in combination with biochemical and cellular data, provide valuable insights into the mechanism of energy transfer from membrane tension to gating of the channel. We discuss these data in a unified two-state model of thermodynamics. In addition, we propose a lipid diffusion-mediated mechanism to explain the adaptation phenomenon of MscS. © 2016 The Protein Society.

Development open source microcontroller based temperature data logger

NASA Astrophysics Data System (ADS)

Abdullah, M. H.; Che Ghani, S. A.; Zaulkafilai, Z.; Tajuddin, S. N.

2017-10-01

This article discusses the development stages in designing, prototyping, testing and deploying a portable open source microcontroller based temperature data logger for use in rough industrial environment. The 5V powered prototype of data logger is equipped with open source Arduino microcontroller for integrating multiple thermocouple sensors with their module, secure digital (SD) card storage, liquid crystal display (LCD), real time clock and electronic enclosure made of acrylic. The program for the function of the datalogger is programmed so that 8 readings from the thermocouples can be acquired within 3 s interval and displayed on the LCD simultaneously. The recorded temperature readings at four different points on both hydrodistillation show similar profile pattern and highest yield of extracted oil was achieved on hydrodistillation 2 at 0.004%. From the obtained results, this study achieved the objective of developing an inexpensive, portable and robust eight channels temperature measuring module with capabilities to monitor and store real time data.

Robust, low-cost data loggers for stream temperature, flow intermittency, and relative conductivity monitoring

USGS Publications Warehouse

Chapin, Thomas; Todd, Andrew S.; Zeigler, Matthew P.

2014-01-01

Water temperature and streamflow intermittency are critical parameters influencing aquatic ecosystem health. Low-cost temperature loggers have made continuous water temperature monitoring relatively simple but determining streamflow timing and intermittency using temperature data alone requires significant and subjective data interpretation. Electrical resistance (ER) sensors have recently been developed to overcome the major limitations of temperature-based methods for the assessment of streamflow intermittency. This technical note introduces the STIC (Stream Temperature, Intermittency, and Conductivity logger); a robust, low-cost, simple to build instrument that provides long-duration, high-resolution monitoring of both relative conductivity (RC) and temperature. Simultaneously collected temperature and RC data provide unambiguous water temperature and streamflow intermittency information that is crucial for monitoring aquatic ecosystem health and assessing regulatory compliance. With proper calibration, the STIC relative conductivity data can be used to monitor specific conductivity.

An Examination of Body Temperature for the Rocky Intertidal Mussel species, Mytilus californianus, Using Remotely Sensed Satellite Observations

NASA Astrophysics Data System (ADS)

Price, J.; Liff, H.; Lakshmi, V.

2012-12-01

Temperature is considered to be one of the most important physical factors in determining organismal distribution and physiological performance of species in rocky intertidal ecosystems, especially the growth and survival of mussels. However, little is known about the spatial and temporal patterns of temperature in intertidal ecosystems or how those patterns affect intertidal mussel species because of limitations in data collection. We collected in situ temperature at Strawberry Hill, Oregon USA using mussel loggers embedded among the intertidal mussel species, Mytilus californianus. Remotely sensed surface temperatures were used in conjunction with in situ weather and ocean data to determine if remotely sensed surface temperatures can be used as a predictor for changes in the body temperature of a rocky intertidal mussel species. The data used in this study was collected between January 2003 and December 2010. The mussel logger temperatures were compared to in situ weather data collected from a local weather station, ocean data collected from a NOAA buoy, and remotely sensed surface temperatures collected from NASA's sun-synchronous Moderate Resolution Imaging Spectroradiometer aboard the Earth Observing System Aqua and EOS Terra satellites. Daily surface temperatures were collected from four pixel locations which included two sea surface temperature (SST) locations and two land surface temperature (LST) locations. One of the land pixels was chosen to represent the intertidal surface temperature (IST) because it was located within the intertidal zone. As expected, all surface temperatures collected via satellite were significantly correlated to each other and the associated in situ temperatures. Examination of temperatures from the off-shore NOAA buoy and the weather station provide evidence that remotely sensed temperatures were similar to in situ temperature data and explain more variability in mussel logger temperatures than the in situ temperatures. Our results suggest that temperatures (surface temperature and air temperature) are similar across larger spatial scales even when the type of data collection is different. Mussel logger temperatures were strongly correlated to SSTs and were not significantly different than SSTs. Sea surface temperature collected during the Aqua overpass explained 67.1% of the variation in mean monthly mussel logger temperature. When SST, LST, and IST were taken into consideration, nearly 73% of the variation in mussel logger temperature was explained. While in situ monthly air temperature and water temperature explained only 28-33% of the variation in mussel logger temperature. Our results suggests that remotely sensed surface temperatures are reliable and important measurements that can be used to better understand the effects temperature may have on intertidal mussel species in Strawberry Hill, Oregon. Remotely sensed surface temperature could act as a relative indicator of change and may be used to predict general habitat trends and drivers that could directly affect organism body temperature.

Minimum daily core body temperature in western grey kangaroos decreases as summer advances: a seasonal pattern, or a direct response to water, heat or energy supply?

PubMed

Maloney, Shane K; Fuller, Andrea; Meyer, Leith C R; Kamerman, Peter R; Mitchell, Graham; Mitchell, Duncan

2011-06-01

Using implanted temperature loggers, we measured core body temperature in nine western grey kangaroos every 5 min for 24 to 98 days in spring and summer. Body temperature was highest at night and decreased rapidly early in the morning, reaching a nadir at 10:00 h, after ambient temperature and solar radiation had begun to increase. On hotter days, the minimum morning body temperature was lower than on cooler days, decreasing from a mean of 36.2°C in the spring to 34.0°C in the summer. This effect correlated better with the time of the year than with proximate thermal stressors, suggesting that either season itself or some factor correlated with season, such as food availability, caused the change. Water saving has been proposed as a selective advantage of heterothermy in other large mammals, but in kangaroos the water savings would have been small and not required in a reserve with permanent standing water. We calculate that the lower core temperature could provide energy savings of nearly 7%. It is likely that the heterothermy that we observed on hot days results either from decreased energy intake during the dry season or from a seasonal pattern entrained in the kangaroos that presumably has been selected for because of decreased energy availability during the dry season.

The STRATAFORM Project: U.S. Geological Survey geotechnical studies

USGS Publications Warehouse

Minasian, Diane L.; Lee, Homa J.; Locat, Jaques; Orzech, Kevin M.; Martz, Gregory R.; Israel, Kenneth

2001-01-01

This report presents physical property logs of core samples from an offshore area near Eureka, CA. The cores were obtained as part of the STRATAFORM Program (Nittrouer and Kravitz, 1995, 1996), a study investigating how present sedimentation and sediment transport processes influence long-term stratigraphic sequences preserved in the geologic record. The core samples were collected during four separate research cruises to the northern California study area, and data shown in the logs of the cores were collected using a multi-sensor whole core logger. The physical properties collected are useful in identifying stratigraphic units, ground-truthing acoustic imagery and sub-bottom profiles, and in understanding mass movement processes. STRATA FORmation on Margins was initiated in 1994 by the Office of Naval Research, Marine Geology and Geophysics Department as a coordinated multi-investigator study of continental-margin sediment transport processes and stratigraphy (Nittrouer and Kravitz, 1996). The program is investigating the stratigraphic signature of the shelf and slope parts of the continental margins, and is designed to provide a better understanding of the sedimentary record and a better prediction of strata. Specifically, the goals of the STRATAFORM Program are to (Nittrouer and Kravitz, 1995): - determine the geological relevance of short-term physical processes that erode, transport, and deposit particles and those processes that subsequently rework the seabed over time scales - improve capabilities for identifying the processes that form the strata observed within the upper ~100 m of the seabed commonly representing 104-106 years of sedimentation. - synthesize this knowledge and bridge the gap between time scales of sedimentary processes and those of sequence stratigraphy. The STRATAFORM Program is divided into studies of the continental shelf and the continental slope; the geotechnical group within the U.S. Geological Survey provides support to both parts of the project.

End-Pleistocene to Holocene paleoenvironmental record from piston corer samples and the challenge of stratigraphic correlation of playa sediment data with a connected alluvial apron from Damghan Basin, Iran

NASA Astrophysics Data System (ADS)

Büdel, Christian; Hoelzmann, Philipp; Wennrich, Volker; Majid Padashi, Sajed; Baumhauer, Roland

2015-04-01

The study yields a first characterization and correlation of the end-Pleistocene to Holocene sediment archive of playa and playa lake deposits in the Damghan Basin, northern Iran. The Basin sediments are deposited since Mio- and Pliocene, which is valid for the connected alluvial fans, too. These are covering the area between the playa and mountains and while prograding from the mountain ranges they deliver gravels and fine-sediments to the basins sink. The processes on the studied alluvial apron are described and dated already and can be explained in seven morphodynamic phases, which are linked to a general lake level high-stand in north-east Iran at about 8000-9000 years ago. If and how these phases are passed on from the alluvial record down to the playa sediment record is aim of this study. Today the salt pans margins are highly affected by salt tectonic drifting and access was suboptimal. Only here drilling could be performed through about 280 centimeters of salt-crust unfrequently intercalated with loamy layers. For yielding undisturbed playa sediment records sampling was performed with inliner-tubes deployed in a piston corer (Kullenberg type). Thus at two different drilling sites in summation seven cores could be taken, down to a maximum depth of 129 cm and 1000 cm. Back in Germany the cores had been opened and initially described, photographed and optically scanned with a core logger. Regarding future studies, the aim was a best possible comprehensive documentation of the cores. Therefore basically grainsize measurements (laser diffraction), multi element analyses (XRF, ICP-OES, titrimetry) and mineralogical measurements (XRD) had been deployed on samples taken from every single previously identified layer. Continuous elemental data was secured by use of a XRF-scanning core logger. The sedimentological description together with laboratory element analyses shows saline conditions in the first three meters coincide with general coarser grain sizes. The next three meters are made up by homogenous partly laminated deposits, rich auf clay and silt and with a decreased content of sulphur and halite. Regular Peaks of sulfate and calcium within this unit presumably indicate post-sedimentary precipitation of gypsum. The homogenous sediment unit is followed by layers clearly set up in three major phases of up-fining sediments. Higher Al and Mg contents following this sedimentation phases suggest a considerable amount of syn-sedimentary clay mineral enrichment. The alignment of alluvial fan phases and phases recorded in the playa is challenging. As figured out before, the focused signals in the study are linked to non-local factors affecting supra-regional land surface alteration. But 0 to less than 1 % organic carbon contents decrease the chance of deriving a valid sediment dating and the possibility of chrono-stratigraphic correlation. Anyway, the clear transitional zone from halite dominated to more or less halite-free sediments can serve as a guideline to the development of further correlations.

Assessment of accuracy, fix success rate, and use of estimated horizontal position error (EHPE) to filter inaccurate data collected by a common commercially available GPS logger.

PubMed

Morris, Gail; Conner, L Mike

2017-01-01

Global positioning system (GPS) technologies have improved the ability of researchers to monitor wildlife; however, use of these technologies is often limited by monetary costs. Some researchers have begun to use commercially available GPS loggers as a less expensive means of tracking wildlife, but data regarding performance of these devices are limited. We tested a commercially available GPS logger (i-gotU GT-120) by placing loggers at ground control points with locations known to < 30 cm. In a preliminary investigation, we collected locations every 15 minutes for several days to estimate location error (LE) and circular error probable (CEP). Using similar methods, we then investigated the influence of cover on LE, CEP, and fix success rate (FSR) by constructing cover over ground control points. We found mean LE was < 10 m and mean 50% CEP was < 7 m. FSR was not significantly influenced by cover and in all treatments remained near 100%. Cover had a minor but significant effect on LE. Denser cover was associated with higher mean LE, but the difference in LE between the no cover and highest cover treatments was only 2.2 m. Finally, the most commonly used commercially available devices provide a measure of estimated horizontal position error (EHPE) which potentially may be used to filter inaccurate locations. Using data combined from the preliminary and cover investigations, we modeled LE as a function of EHPE and number of satellites. We found support for use of both EHPE and number of satellites in predicting LE; however, use of EHPE to filter inaccurate locations resulted in the loss of many locations with low error in return for only modest improvements in LE. Even without filtering, the accuracy of the logger was likely sufficient for studies which can accept average location errors of approximately 10 m.

Understanding perceptions of stakeholder groups about Forestry Best Management Practices in Georgia.

PubMed

Tumpach, Chantal; Dwivedi, Puneet; Izlar, Robert; Cook, Chase

2018-05-01

Forestry Best Management Practices (BMPs) are critical in ensuring sustainable forest management in the United States because of their effectiveness in protecting water quality, reducing soil erosion, maintaining riparian habitat, and sustaining site productivity. The success of forestry BMPs depends heavily on coordination among primary stakeholder groups. It is important to understand perceptions of such groups for a successful forest policy formulation. We used the SWOT-AHP (Strengths, Weaknesses, Opportunities, and Threats analysis with the Analytical Hierarchy Process) framework to assess perceptions of three stakeholder groups (loggers, landowners, agency foresters) about forestry BMPs in Georgia, the largest roundwood producing state in the United States. The agency and logger stakeholder groups gave the highest priority to improved reputation under the strength category, whereas the landowner stakeholder group perceived sustainable forestry as the highest priority under the same category. Lack of landowner education was the highest priority under the weakness category for landowner and agency stakeholder groups, whereas the logger stakeholder group selected lack of trained personnel as the highest priority under the same category. Agency and landowner stakeholder groups gave the highest priority to training and education while loggers indicated maintenance of forest-based environmental benefits as their highest priority under the opportunity category. Finally, landowners and agency stakeholder groups perceived more regulations and restrictions as most significant in the threat category whereas the logger stakeholder group was most concerned about the insufficient accounting of cost sharing under the same category. Overall, selected stakeholder groups recognize the importance of forestry BMPs and had positive perceptions about them. A collaborative approach based on continuous feedback can streamline expectations of stakeholder groups about forestry BMPs in Georgia and several other states that are interested in maintaining high compliance rate of forestry BMPs for ensuring sustainable forest management. Copyright © 2018 Elsevier Ltd. All rights reserved.

New marine geophysical and sediment record of the Northeast Greenland Ice Stream.

NASA Astrophysics Data System (ADS)

Callard, L.; Roberts, D. H.; O'Cofaigh, C.; Lloyd, J. M.; Smith, J. A.; Dorschel, B.

2017-12-01

The NE Greenland Ice Stream (NEGIS) drains 16% of the Greenland Ice Sheet (GrIS) and has a sea-level equivalent of 1.1-1.4 m. Stabilised by two floating ice shelves, 79N and Zachariae Isstrom, until recently it has shown little response to increased atmospheric and oceanic warming. However, since 2010 it has experienced an accelerated rate of grounding line retreat ( 4 km) and significant ice shelf loss that indicates that this sector of the GrIS is now responding to current oceanic and/or climatic change and has the potential to be a major contributor to future global sea-level rise. The project `NEGIS', a collaboration between Durham University and AWI, aims to reconstruct the history of the NE Greenland Ice Stream from the Last Glacial Maximum (LGM) to present using both onshore and offshore geological archives to better understand past ice stream response to a warming climate. This contribution presents results and interpretations from an offshore dataset collected on the RV Polarstern, cruises PS100 and PS109 in 2016 and 2017. Gravity and box cores, supplemented by swath bathymetric and sub-bottom profiler data, were acquired and initial core analysis including x-radiographs and MSCL data logging has been performed. Data collection focused principally in the Norske Trough and the area directly in front of the 79N ice shelf, a sub-ice shelf environment as recently as two years ago. On the outer shelf streamlined subglacial bedforms, grounding-zone wedges and moraines as well as overconsolidated subglacial tills, record an extensive ice sheet advance to the shelf edge. On the inner shelf and in front of the 79N ice shelf, deep, glacially-eroded bedrock basins are infilled with stratified sediment. The stratified muds represent deglacial and Holocene glacimarine sedimentation, and capture the recent transition from sub-ice shelf to shelf free conditions. Multiproxy palaeoenvironmental reconstructions, including foraminifera and diatom analysis, and radiocarbon dating are used to constrain the timing and mechanism of retreat.

An Analysis of Mimosa pudica Leaves Movement by Using LoggerPro Software

NASA Astrophysics Data System (ADS)

Sugito; Susilo; Handayani, L.; Marwoto, P.

2016-08-01

The unique phenomena of Mimosa pudica are the closing and opening movements of its leaves when they got a stimulus. By using certain software, these movements can be drawn into graphic that can be analysed. The LoggerPro provides facilities needed to analyse recorded videos of the plant's reaction to stimulus. Then, through the resulted graph, analysis of some variables can be carried out. The result showed that the plant's movement fits an equation of y = mx + c.

Fine Scale Baleen Whale Behavior Observed Via Tagging Over Daily Time Scales

DTIC Science & Technology

2014-09-30

During late fall 2013 and winter 2014, I built a data logger for the optical plankton counter ( OPC ) to facilitate its continued use on the NOAA Ship...Gordon Gunter. This ship has very long (> 5 km) of conducting sea cable, and we had communication issues with the OPC with the manufacturers...telemetry system over this long sea cable. To solve this problem, I adapted an existing data logger to provide power and log data from the OPC locally on

Preliminary Physical Stratigraphy and Geophysical Data of the USGS Hope Plantation Core (BE-110), Bertie County, North Carolina

USGS Publications Warehouse

Weems, Robert E.; Seefelt, Ellen L.; Wrege, Beth M.; Self-Trail, Jean M.; Prowell, David C.; Durand, Colleen; Cobbs, Eugene F.; McKinney, Kevin C.

2007-01-01

Introduction In March and April, 2004, the U.S. Geological Survey (USGS), in cooperation with the North Carolina Geological Survey (NCGS) and the Raleigh Water Resources Discipline (WRD), drilled a stratigraphic test hole and well in Bertie County, North Carolina (fig. 1). The Hope Plantation test hole (BE-110-2004) was cored on the property of Hope Plantation near Windsor, North Carolina. The drill site is located on the Republican 7.5 minute quadradrangle at lat 36?01'58'N., long 78?01'09'W. (decimal degrees 36.0329 and 77.0192) (fig. 2). The altitude of the site is 48 ft above mean sea level as determined by Paulin Precise altimeter. This test hole was continuously cored by Eugene F. Cobbs, III and Kevin C. McKinney (USGS) to a total depth of 1094.5 ft. Later, a ground water observation well was installed with a screened interval between 315-329 feet below land surface (fig. 3). Upper Triassic, Lower Cretaceous, Upper Cretaceous, Tertiary, and Quaternary sediments were recovered from the site. The core is stored at the NCGS Coastal Plain core storage facility in Raleigh, North Carolina. In this report, we provide the initial lithostratigraphic summary recorded at the drill site along with site core photographs, data from the geophysical logger, calcareous nannofossil biostratigraphic correlations (Table 1) and initial hydrogeologic interpretations. The lithostratigraphy from this core can be compared to previous investigations of the Elizabethtown corehole, near Elizabethtown, North Carolina in Bladen County (Self-Trail, Wrege, and others, 2004), the Kure Beach corehole, near Wilmington, North Carolina in New Hanover County (Self-Trail, Prowell, and Christopher, 2004), the Esso #1, Esso #2, Mobil #1 and Mobil #2 cores in the Albermarle and Pamlico Sounds (Zarra, 1989), and the Cape Fear River outcrops in Bladen County (Farrell, 1998; Farrell and others, 2001). This core is the third in a series of planned benchmark coreholes that will be used to elucidate the physical stratigraphy, facies, thickness, and hydrogeology of the Tertiary and Cretaceous Coastal Plain sediments of North Carolina.

Facies-dependent variations in sediment physical properties on the Mississippi River Delta Front, USA: evidence for depositional and post-depositional processes

NASA Astrophysics Data System (ADS)

Smith, J. E., IV; Bentley, S. J.; Courtois, A. J.; Obelcz, J.; Chaytor, J. D.; Maloney, J. M.; Georgiou, I. Y.; Xu, K.; Miner, M. D.

2017-12-01

Recent studies on Mississippi River Delta have documented sub-aerial land loss, driven in part by declining sediment load over the past century. Impacts of changing sediment load on the subaqueous delta are less well known. The subaqueous Mississippi River Delta Front is known to be shaped by extensive submarine mudflows operating at a range of temporal and spatial scales, however impacts of changing sediment delivery on mudflow deposits have not been investigated. To better understand seabed morphology and stratigraphy as impacted by plume sedimentation and mudflows, an integrated geological/geophysical study was undertaken in delta front regions offshore the three main passes of the Mississippi River Delta. This study focuses on stratigraphy and physical properties of 30 piston cores (5-9 m length) collected in June 2017. Coring locations were selected in gully, lobe and prodelta settings based on multibeam bathymetry and seismic profiles collected in mid-May 2017. Cores were analyzed for density, magnetic susceptibility, P-wave speed, and resistivity using a Geotek multi sensor core logger; here, we focus on density data. Core density profiles generally vary systematically across facies. Density profiles of gully cores are nearly invariant with some downward stepwise increases delineating units meters thick, and abundant gaps likely caused by gas expansion. Lobe cores generally have subtle downward increases in density, some stepwise density increases, and fewer gaps. Prodelta cores show more pronounced downward density increases, decimeter-scale peaks and valleys in density profiles, but stepwise increases are less evident. We hypothesize that density profiles in gully and lobe settings (uniform profiles except for stepwise increases) reflect remolding by mudflows, whereas density variations in prodelta settings instead reflect grain size variations (decimeter-scale) and more advanced consolidation (overall downward density increase) consistent with slower sediment deposition. These hypotheses will be evaluated by a more detailed study of seismic stratigraphy and core properties, including geochronology, grain size distribution and X-radiographic imaging, to further relate important sedimentary processes with resulting deposits.

Description and evaluation of the Acoustic Profiling of Ocean Currents (APOC) system used on R. V. Oceanus cruise 96 on 11-22 May 1981

NASA Technical Reports Server (NTRS)

Joyce, T. M.; Rintoul, S. R., Jr.; Barbour, R. L.

1982-01-01

The underway current profiling system which consists of a microprocessor controlled data logger that collects and formats data from a four beam Ametek-Straza 300 kHz acoustic Doppler current profiler, heading from the ship's gyrocompass, and navigation information from a Loran-C receiver and a satellite navigation unit is discussed. Data are recorded on magnetic tape and real time is calculated. Time averaging is required to remove effects of ship motion. An intercomparison is made with a moored vector measuring current meter (VMCM). The mean difference in hourly averaged APOC and VMCM currents over the four hour intercomparison is a few mm s minus including: two Gulf Stream crossings, a warm core ring survey, and shallow water in a frontal zone to the east of Nantucket Shoals.

A portable data-logging system for industrial hygiene personal chlorine monitoring.

PubMed

Langhorst, M L; Illes, S P

1986-02-01

The combination of suitable portable sensors or instruments with small microprocessor-based data-logger units has made it possible to obtain detailed monitoring data for many health and environmental applications. Following data acquisition in field use, the logged data may be transferred to a desk-top personal computer for complete flexibility in manipulation of data and formating of results. A system has been assembled from commercial components and demonstrated for chlorine personal monitoring applications. The system consists of personal chlorine sensors, a Metrosonics data-logger and reader unit, and an Apple II Plus personal computer. The computer software was developed to handle sensor calibration, data evaluation and reduction, report formating and long-term storage of raw data on a disk. This system makes it possible to generate time-concentration profiles, evaluate dose above a threshold, quantitate short-term excursions and summarize time-weighted average (TWA) results. Field data from plant trials demonstrated feasibility of use, ruggedness and reliability. No significant differences were found between the time-weighted average chlorine concentrations determined by the sensor/logger system and two other methods: the sulfamic acid bubbler reference method and the 3M Poroplastic diffusional dosimeter. The sensor/data-logger system, however, provided far more information than the other two methods in terms of peak excursions, TWAs and exposure doses. For industrial hygiene applications, the system allows better definition of employee exposures, particularly for chemicals with acute as well as chronic health effects.(ABSTRACT TRUNCATED AT 250 WORDS)

Open Source Hardware for DIY Environmental Sensing

NASA Astrophysics Data System (ADS)

Aufdenkampe, A. K.; Hicks, S. D.; Damiano, S. G.; Montgomery, D. S.

2014-12-01

The Arduino open source electronics platform has been very popular within the DIY (Do It Yourself) community for several years, and it is now providing environmental science researchers with an inexpensive alternative to commercial data logging and transmission hardware. Here we present the designs for our latest series of custom Arduino-based dataloggers, which include wireless communication options like self-meshing radio networks and cellular phone modules. The main Arduino board uses a custom interface board to connect to various research-grade sensors to take readings of turbidity, dissolved oxygen, water depth and conductivity, soil moisture, solar radiation, and other parameters. Sensors with SDI-12 communications can be directly interfaced to the logger using our open Arduino-SDI-12 software library (https://github.com/StroudCenter/Arduino-SDI-12). Different deployment options are shown, like rugged enclosures to house the loggers and rigs for mounting the sensors in both fresh water and marine environments. After the data has been collected and transmitted by the logger, the data is received by a mySQL-PHP stack running on a web server that can be accessed from anywhere in the world. Once there, the data can be visualized on web pages or served though REST requests and Water One Flow (WOF) services. Since one of the main benefits of using open source hardware is the easy collaboration between users, we are introducing a new web platform for discussion and sharing of ideas and plans for hardware and software designs used with DIY environmental sensors and data loggers.

Gains in efficiency and scientific potential of continental climate reconstruction provided by the LRC LacCore Facility, University of Minnesota

NASA Astrophysics Data System (ADS)

Noren, A.; Brady, K.; Myrbo, A.; Ito, E.

2007-12-01

Lacustrine sediment cores comprise an integral archive for the determination of continental paleoclimate, for their potentially high temporal resolution and for their ability to resolve spatial variability in climate across vast sections of the globe. Researchers studying these archives now have a large, nationally-funded, public facility dedicated to the support of their efforts. The LRC LacCore Facility, funded by NSF and the University of Minnesota, provides free or low-cost assistance to any portion of research projects, depending on the specific needs of the project. A large collection of field equipment (site survey equipment, coring devices, boats/platforms, water sampling devices) for nearly any lacustrine setting is available for rental, and Livingstone-type corers and drive rods may be purchased. LacCore staff can accompany field expeditions to operate these devices and curate samples, or provide training prior to device rental. The Facility maintains strong connections to experienced shipping agents and customs brokers, which vastly improves transport and importation of samples. In the lab, high-end instrumentation (e.g., multisensor loggers, high-resolution digital linescan cameras) provides a baseline of fundamental analyses before any sample material is consumed. LacCore staff provide support and training in lithological description, including smear-slide, XRD, and SEM analyses. The LRC botanical macrofossil reference collection is a valuable resource for both core description and detailed macrofossil analysis. Dedicated equipment and space for various subsample analyses streamlines these endeavors; subsamples for several analyses may be submitted for preparation or analysis by Facility technicians for a fee (e.g., carbon and sulfur coulometry, grain size, pollen sample preparation and analysis, charcoal, biogenic silica, LOI, freeze drying). The National Lacustrine Core Repository now curates ~9km of sediment cores from expeditions around the world, and stores metadata and analytical data for all cores processed at the facility. Any researcher may submit sample requests for material in archived cores. Supplies for field (e.g., polycarbonate pipe, endcaps), lab (e.g., sample containers, pollen sample spike), and curation (e.g., D-tubes) are sold at cost. In collaboration with facility users, staff continually develop new equipment, supplies, and procedures as needed in order to provide the best and most comprehensive set of services to the research community.

Short communication: Effect of cross ventilation with or without evaporative pads on core body temperature and resting time of lactating cows.

PubMed

Smith, J F; Bradford, B J; Harner, J P; Potts, J C; Allen, J D; Overton, M W; Ortiz, X A; Collier, R J

2016-02-01

A trial was performed to assess the effect of evaporative pads on core body temperature (CBT) and lying behavior of lactating Holstein cows housed in cross-ventilated freestall facilities in a humid environment. This trial was undertaken in 2 barns equipped with (EP) or without (NP) evaporative pads. Each facility had 4 pens, 1 baffle/pen, and a nominal width of 122 m. Stocking density was higher (123.4 vs. 113.1%) and freestalls were slightly shorter (2.3 vs. 2.4 m) and narrower (1.16 vs. 1.21 m) in EP compared with NP barns. In each pen, lying behavior of 20 cows was monitored using electronic data loggers that recorded at 1-min intervals. A subset (n=14) of these cows within each pen were also fitted with temperature loggers attached to blank controlled intravaginal drug release devices to determine CBT every 5 min. Ambient conditions were collected every 15 min. Individual cow lying duration and lying bouts were assessed for each cow, as well as time spent standing and CBT within the following categories: CBT <38.6°C, and CBT >38.6, >38.9, >39.2, >39.4, and >39.7°C. These variables were analyzed using pen as the experimental unit, with cow and day as additional random effects. The average maximum ambient conditions over the 9 d were 25°C and 78.74% relative humidity. No differences were observed in lying duration and number of lying bouts over the 9-d period, with overall means of 696±31 min/d and 12.6±0.5 bouts/d. The EP cows spent 170 min/d longer with a CBT <38.6°C and 107 min/d less with CBT >39.2°C than did NP cows. Cooling with evaporative pads tended to increase time spent lying with a CBT >8.6°C and lying bouts/d for EP cows versus NP cows. Results from this trial show that even under mild heat stress, evaporative cooling in cross-ventilated facilities can decrease CBT and tended to increase lying time. Copyright © 2016 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

A preliminary evaluation of a reusable digital sterilization indicator prototype.

PubMed

Puttaiah, R; Griggs, J; D'Onofrio, M

2014-09-01

Sterilization of critical and semicritical instruments used in patient care must undergo a terminal process of sterilization. Use of chemical and physical indicators are important in providing information on the sterilizer's performance during each cycle. Regular and periodic monitoring of sterilizers using biological indicators is necessary in periodically validating performance of sterilizers. Data loggers or independent digital parametric indicators are innovative devices that provide more information than various classes chemical indicators. In this study we evaluated a prototype of an independent digital parametric indicator's use in autoclaves. The purpose of this study was to evaluate the performance of an independent digital indicator/data logger prototype (DS1922F) that could be used for multiple cycles within an autoclave.MG Materials and methods: Three batches of the DS1922F (150 samples) were used in this study that was conducted in a series. The first batch was challenged with 300 sterilization cycles within an autoclave and the data loggers evaluated to study failures and the reason for failure, make corrections and improve the prototype design. After changes made based on studying the first batch, the second batch of the prototype (150 samples) were challenged once again with 300 sterilization cycles within an autoclave and failure studied again in further improvement of the prototype. The final batch (3rd batch) of the prototype (150 samples) was challenged again but with 600 cycles to see how long they would last. Kaplan-Meier survival analysis analyses of all three batches was conducted (α = 0.05) and failed samples qualitatively studied in understanding the variables involved in the failure of the prototype, and in improving quality. Each tested batch provided crucial information on device failure and helped in improvement of the prototype. Mean lifetime survival of the final batch (Batch 3) of prototype was 498 (480, 516) sterilization cycles in an autoclave. In this study, the final batch of the DS1922F prototype data logger was found to be robust in withstanding the challenge of 600 autoclave cycles, with a mean lifetime of more than 450 cycles, multiple times more than prescribed number of cycles. Instrument reprocessing is among the important aspects of infection control. While stringent procedures are followed in instrument reprocessing within the clinic in assuring patient safety, regular use of sterilization process indicators and periodic biological validation of the sterilizer's performance is necessary. Chemical indicators for use in Autoclaves provide information on whether the particular cycle's parameters were achieved but do not provide at what specific point in time or temperature the failure occurred. Data loggers and associated reader software as the tested prototype in this evaluation (DS1922F), are designed to provide continuous information on time and temperature of the prescribed cycle. Data loggers provide immediate information on the process as opposed to Biological Indicators that take from days to a week in obtaining a confirmatory result. Further, many countries do not have the sterilization monitoring service infrastructure to meet the demands of the end users. In the absence of sterilization monitoring services, use of digital data loggers for each sterilization cycle is more pragmatic.

Correlating bilayer tablet delamination tendencies to micro-environmental thermodynamic conditions during pan coating.

PubMed

Zacour, Brian M; Pandey, Preetanshu; Subramanian, Ganeshkumar; Gao, Julia Z; Nikfar, Faranak

2014-06-01

The objective of this study was to determine the impact that the micro-environment, as measured by PyroButton data loggers, experienced by tablets during the pan coating unit operation had on the layer adhesion of bilayer tablets in open storage conditions. A full factorial design of experiments (DOE) with three center points was conducted to study the impact of final tablet hardness, film coating spray rate and film coating exhaust temperature on the delamination tendencies of bilayer tablets. PyroButton data loggers were placed (fixed) at various locations in a pan coater and were also allowed to freely move with the tablet bed to measure the micro-environmental temperature and humidity conditions of the tablet bed. The variance in the measured micro-environment via PyroButton data loggers accounted for 75% of the variance in the delamination tendencies of bilayer tablets on storage (R(2 )= 0.75). A survival analysis suggested that tablet hardness and coating spray rate significantly impacted the delamination tendencies of the bilayer tablets under open storage conditions. The coating exhaust temperature did not show good correlation with the tablets' propensity to crack indicating that it was not representative of the coating micro-environment. Models created using data obtained from the PyroButton data loggers outperformed models created using primary DOE factors in the prediction of bilayer tablet strength, especially upon equipment or scale transfers. The coating micro-environment experienced by tablets during the pan coating unit operation significantly impacts the strength of the bilayer interface of tablets on storage.

A comparison in Colorado of three methods to monitor breeding amphibians

USGS Publications Warehouse

Corn, P.S.; Muths, E.; Iko, W.M.

2000-01-01

We surveyed amphibians at 4 montane and 2 plains lentic sites in northern Colorado using 3 techniques: standardized call surveys, automated recording devices (frog-loggers), and intensive surveys including capture-recapture techniques. Amphibians were observed at 5 sites. Species richness varied from 0 to 4 species at each site. Richness scores, the sums of species richness among sites, were similar among methods: 8 for call surveys, 10 for frog-loggers, and 11 for intensive surveys (9 if the non-vocal salamander Ambystoma tigrinum is excluded). The frog-logger at 1 site recorded Spea bombifrons which was not active during the times when call and intensive surveys were conducted. Relative abundance scores from call surveys failed to reflect a relatively large population of Bufo woodhousii at 1 site and only weakly differentiated among different-sized populations of Pseudacris maculata at 3 other sites. For extensive applications, call surveys have the lowest costs and fewest requirements for highly trained personnel. However, for a variety of reasons, call surveys cannot be used with equal effectiveness in all parts of North America.

DOE Office of Scientific and Technical Information (OSTI.GOV)

HUBER, J.H.

An Enraf Densitometer is installed on tank 241-AY-102. The Densitometer will frequently be tasked to obtain and log density profiles. The activity can be effected a number of ways. Enraf Incorporated provides a software package called ''Logger18'' to its customers for the purpose of in-shop testing of their gauges. Logger18 is capable of accepting an input file which can direct the gauge to obtain a density profile for a given tank level and bottom limit. Logger18 is a complex, DOS based program which will require trained technicians and/or tank farm entries to obtain the data. ALARA considerations have prompted themore » development of a more user-friendly, computer-based interface to the Enraf densitometers. This document records the plan by which this new Enraf data acquisition software will be developed, reviewed, verified, and released. This plan applies to the development and implementation of a one-time-use software program, which will be called ''Enraf Control Panel.'' The software will be primarily used for remote operation of Enraf Densitometers for the purpose of obtaining and logging tank product density profiles.« less

Sedimentation of the mud belt along the coast of China from the mouth of the Yangtze (Changjiang) River to northern Taiwan Strait: An Source-to-Sink Perspective

NASA Astrophysics Data System (ADS)

Chien, C. C.; Liu, J. T.; Yang, R.; Huh, C. A.; Su, C. C.

2016-02-01

Sediments in the Taiwan Strait are originated from Mainland China and Taiwan. The China Coastal Current, influenced by the northeast monsoon in winter, becomes enhanced, which caries the sediments exported from the Yangtze River to the southern East China Sea and the Taiwan Strait along the Zhemin-Taiwan Strait mud belt. The sediment transport process is also influenced by tidal current and Kuroshio Branch Current and Taiwan Warm Current, making the seafloor sediment signals complex. This study used R/V Ocean Researcher V (Cruise 0032), to collect six box cores and three gravity cores along the Zhemin mud belt and the mud belt in northern Taiwan Strait in the winter of 2014. From the core samples, grain-size distribution, Multi-Sensor Core Logger, and 7Be activity were measured to investigate the sedimentation process along the mud belts. The box core taken at the mouth of the Changjiang- is composed of homogeneous clay and rich in shell fragments. The core off the mouth of Ou River is composed of homogeneous clay, but showing horizontal laminations. Near the Taishan Island off the coast of Zhejiang the core is consisted of a homogeneous sandy sediments that turned into clay. Off the mouth of the Min River the core consists of clay with shell fragments. Off the coast of the Wu River on the west coast of the Taiwan, the core is mainly composed of muddy sediments, which has the siltstone layers of oblique bedding. Off the mouth of Zhuoshui River in central Taiwan, the core is composed of sandy sediments. From the mouth of the Changhjiang, Zhemin mud belt, the northern Taiwan Strait mud belt, to the central Taiwan Strait, 7Be activity in the seafloor sediment indicates that the freshness of the terrigenous sediments decreased. The Mass Magnetic Susceptiblity (MSI) demonstrates that the terrigenous sediments decreased from north to south. The MSI signals in the core off the mouth of the Minjiang are different from those in the neighboring cores. This is suspected due to the convergence of sediments from the Changjiang and Taiwan. The particle sizes of the cores show that the sediment became coarser from the north to south. In the future the study will make use of 210Pbex, and other environmental and provenance such as water dynamic mechanism variables to explore the sediment source and sink patterns along with the Zhemin-Taiwan Strait mud belts.

Coupled oscillators: interesting experiments for high school students

NASA Astrophysics Data System (ADS)

Kodejška, Č.; Lepil, O.; Sedláčková, H.

2018-07-01

This work deals with the experimental demonstration of coupled oscillators using simple tools in the form of mechanical coupled pendulums, magnetically coupled elastic strings or electromagnetic oscillators. For the evaluation of results the data logger Lab Quest Vernier and video analysis in the Tracker program were used. In the first part of this work, coupled mechanical oscillators of different types are shown and the data analysis by the Tracker or Vernier Logger Pro programs. The second part describes a measurement using two LC circuits with inductively or capacitive coupled electromagnetic oscillators and the obtained experimental results.

Graphic-output temperature data loggers for monitoring vaccine refrigeration: implications for pertussis.

PubMed

McColloster, Patrick; Vallbona, Carlos

2011-01-01

We conducted the first US study using graphic-output temperature data loggers in quantifying cold chain failure. Fifty-four vaccine refrigerators of a county outpatient health system were studied. Forty-eight percent maintained temperatures of 2°C to 8°C and 24% had protracted periods of temperatures less than 0°C. The correlation between the percentage of refrigerators with freezing temperatures and the pertussis rate for each health region was r = 0.76. The findings suggest that improper vaccine storage may have contributed to recent increases in pertussis rates.

Teaching Science with Technology

NASA Astrophysics Data System (ADS)

Gornostaeva, Svetlana

2015-04-01

This is a short introduction about me, description of different teaching methods, which is used in my teaching practice of Geography, biology and GIS systems education. The main part is tell about practical lesson with lab Vernier. My name is Svetlana Gornostaeva. I am a geography, biology and GIS systems teacher in Tallinn Mustjõe Gymnasium (www.mjg.ee) and private school Garant (http://www.erakoolgarant.ee/). In my teaching practice I do all to show that science courses are very important, interesting, and do not difficult. I use differentiated instruction methods also consider individual needs. At lessons is used different active teaching methods such as individual work of various levels of difficulty, team works, creative tasks, interactive exercises, excursions, role-playing games, meeting with experts. On my lessons I use visual aids (maps, a collection of rocks and minerals, herbarium, posters, Vernier data logger). My favorite teaching methods are excursions, meeting with experts and practical lesson with lab Vernier. A small part of my job demonstrate my poster. In the next abstract I want to bring a one practical work with Vernier which I do with my students, when we teach a theme "Atmosphere and climate". OUTDOOR LEARNING. SUBJECT "ATMOSPHERE AND CLIMATE". WEATHER OBSERVATIONS WITH VERNIER DATA LOGGER. The aim: students teach to use Vernier data logger and measure climatic parameters such as: temperature, humidity, atmospheric pressure, solar radiation, ultraviolet light radiation, wind speed. In working process pupils also teach work together, observe natural processes, analyze. Children are working by small groups, 4-5 in each group. Every one should personally measure all parameters and put numbers into the table. After it group observe cloudiness, analyze table and give conclusion "Is at this moment dominates cyclone or anticyclone ?". Children really like this kind of job. Vernier data logger it is really fantastic tool. It is mobile lab. This system give possibilities to easy and fast observe nature process in dynamic. Vernier puts easy-to-use data loggers, sensors, experiments and graphing/analysis software into the hands of students, helping educators develop the next generation of scientists and engineers. You also can do a bit fun with Vernier. For instance, children, who finished their job faster with anemometer can give answer to the question : whom lungs are bigger?" or with thermometer give answer to the question : who has the hottest hands?". Also with thermometer children can draw a rabbit or a mountain. I convinced that Vernier data logger with sensors should be in each school. SUMMARY Personally I am young teacher and do not have a lot of work experience, but I really like my work and do all to share my skills to my students.

Preliminary Facies Reconstruction of a Late Pleistocene Cypress Forest Discovered on the Northern Gulf of Mexico Continental Shelf

NASA Astrophysics Data System (ADS)

Gonzalez Rodriguez, S. M.; Bentley, S. J.; DeLong, K. L.; Xu, K.; Caporaso, A.; Obelcz, J. B.; Harley, G. L.; Reese, C. A.; Truong, J. T.

2016-12-01

We are investigating the origin and preservation of an ancient bald cypress forest (Taxodium distichum) discovered on the continental shelf seafloor, offshore of Gulf Shores, Alabama, USA, in 20 m water depth. The forest was likely buried in the late Pleistocene, possibly exhumed by Hurricane Ivan in 2004, and is now exposed as stumps in life position with little evidence of decay before recent marine exposure. Radiocarbon analyses show that the forest age is near (and in some cases beyond) the limits of 14C dating, at least 41-45 ky BP. In August 2015 and July 2016, submersible vibracores (up to 5 m in length) were collected. Ongoing core analyses include: organic content (loss on ignition), granulometry, and core logging using a Geotek Multi Sensor Core Logger to generate imagery, bulk density, and x-ray fluorescence data. To bolster 14C analyses, cores collected in 2016 are presently being dated using optically stimulated luminescence. Local stratigraphy consists of a surface facies of Holocene transgressive sands, underlain by possible estuarine sediments of interbedded sand and mud (potentially Holocene or Pleistocene), overlying a swamp or delta plain facies (likely Pleistocene) containing woody debris and mud. Deeper woody facies are thought to include the soil horizons of the ancient cypress forest. Cores collected in 2016 revealed a Pleistocene paleosol beneath Holocene sands in a nearby trough. Elevation differences between swamp and paleosol horizons will be evaluated from bathymetric and subbottom data, to help characterize the preserved ancient landscape. Initial interpretation based on close proximity of Pleistocene swamp and oxidized paleosol sediments, and regional geomorphic gradients suggest that this relatively diverse assemblage of facies developed up to tens of km from the glacial-age coastline, and relatively rapid burial prevented erosion by coastal processes during the Holocene transgression thus preserving the tree stumps and wood debris.

Homeothermy and primate bipedalism: is water shortage or solar radiation the main threat to baboon (Papio hamadryas) homeothermy?

PubMed

Mitchell, Duncan; Fuller, Andrea; Maloney, Shane K

2009-05-01

Other than the hominin lineage, baboons are the diurnally active primates that have colonized the arid plains of Africa most successfully. While the hominin lineage adopted bipedalism before colonizing the open, dry plains, baboons retained a quadrupedal mode of locomotion. Because bipedalism has been considered to reduce the thermoregulatory stress of inhabiting open dry plains, we investigated how baboons cope with thermal loads and water restriction. Using implanted data loggers, we measured abdominal temperature every 5 min in six unrestrained baboons while they were exposed to simulated desert conditions (15 degrees C at night rising to 35 degrees C during the day, with and without extra radiant heating), or an ambient temperature of 22 degrees C. At 22 degrees C, core temperature averaged 37.9 degrees C and cycled nychthemerally by 1.7 degrees C. Mean, minimum, and maximum daily core temperatures in euhydrated baboons in the simulated desert environments did not differ from the temperatures displayed in the 22 degrees C environment, even when radiant heating was applied. At 22 degrees C, restricting water intake did not affect core temperature. During the desert simulations, maximum core temperature increased significantly on each day of water deprivation, with the highest temperatures (>40 degrees C) on the third day in the simulation that included radiant heat. When drinking water heated to 38 degrees C was returned, core temperature decreased rapidly to a level lower than normal for that time of day. We conclude that baboons with access to water can maintain homeothermy in the face of high air temperatures and radiant heat loads, but that a lack of access to drinking water poses a major threat to baboon homeothermy. We speculate that any competitive thermoregulatory advantage of bipedalism in early hominins was related to coping with water shortage in hot environments, and that their freed hands might have enabled them to transport enough water to avoid dangerous hyperthermia.

Sedimentary records of Typhoon Haiyan in the South China Sea

NASA Astrophysics Data System (ADS)

Su, C. C.; Chen, Y. H.; Chang, J. H.; Hsu, H. H.; Yu, P. S.; Liu, C. S.

2016-12-01

South China Sea (SCS), which is located at the boundary of the Eurasian, Philippine Sea, and Indian plates, is the largest marginal sea of the northwest Pacific and also on the North Western Pacific corridor of typhoons. The unique tectonic setting and climatic conditions make it has to face the severe natural hazards, like submarine landslides, and high sediment discharges which induced by typhoon. On November 8, 2013, the Typhoon Haiyan, which was one of the largest tropical cyclones ever recorded in western Pacific, devastated Philippines and caused catastrophic destruction. Before the Typhoon Haiyan reached Hainan Province, China and Quangninh Province, Vietnam, it emerged over the SCS. How was the large amount of terrestrial materials distributed and recorded in deep sea sediments by such intense typhoon? Is it possible for us to reconstruct the history of extreme tropical cyclones by using deep sea cores? In this study, twelve gravity cores were collected in the Central SCS Basin and around Taiping Island (Itu Aba Island) from 2014 to 2015 and a series of analysis including Multi-Sensor Core Logger, XRF Core Scanner, core surface and X-radiograph images, grain size, and excess 210Pb chronology were conducted for modern extreme event records in cores and attempt to evaluate the possibility of reconstructed extreme typhoon records in cores from the SCS. On core surface images, an obvious brownish oxidized layer exist in core top with higher 210Pb activities beneath the layer. According to the sampling time, we conjecture the oxidized layer might formed by Typhoon Haiyan in 2013. In addition, the Itrax data shows high manganese content only exist in this layer which might related to the modern industrial pollution delivered by typhoon induced flooding from Philippines. The Power Barge 103 of Napocor in Estancia IIoilo was dislodged from its mount by Typhoon Haiyan and the United Nations Disaster Assessment and Coordination Team reported 600,000 liters of bunker fuel had spilled. To clarify the relationship between the oil spill and high manganese records in sediments, some further analysis is needed. Our analysis result shows, in the Central SCS Basin, over 80 cm turbidite layer was deposited by Typhoon Haiyan and it will take more than 4000 years to deposit on seafloor without the impact of extreme events.

End-Use Load and Conservation Assessment Program : Co-Instrumentation Test of Two Microcomputer-Based Energy Monitoring Systems.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fishbaugher, M. J.

1985-05-01

The decreasing cost of microcomputers along with improvements in power metering circuitry have changed the way in which electrical energy use is monitored. Although utilities still rely on kilowatt-hour (kWh) meters for billing purposes, a microcomputer-based monitoring system is used when greater temporal and end-use resolution is desired. Because these types of monitoring systems will be used increasingly in large-scale conservation and end-use studies, it is important that their performance be analyzed to determine their accuracy. A co-instrumentation test was devised in which two such microcomputer-based monitoring systems made simultaneous measurements of electrical end-uses in two commercial buildings. The analysismore » of the co-instrumentation data aids in the evaluation of microcomputer-based monitoring systems used for end-use measurements. Separate and independent data loggers were used to measure the same loads simultaneously. In addition to these two systems, a utility billing meter measured the total energy use in each building during the co-instrumentation test. The utility's meters provided a relatively accurate standard by which the performance of both loggers could be judged. The comparison between the SCL and PNL microcomputer-based loggers has shown that power measurement techniques directly affect system performance. The co-instrumentation test has shown that there are certain standards that a monitoring system must meet if it is to perform well. First, it is essential to calibrate a microcomputer-based logger against a known standard load before the system is installed. Second, a microcomputer-based system must have some way of accounting for power factors. Recent advances in power metering circuitry have made it relatively easy to apply these power factors automatically in real time.« less

Validation of cooling effect of insulated containers for the shipment of corneal tissue and recommendations for transport.

PubMed

Miller, Thomas D; Maxwell, Andrew J; Lindquist, Thomas D; Requard, Jake

2013-01-01

To determine the cooling effect of generic insulated shipping containers in ambient and high-temperature environments. Twenty-seven shipping containers were packed with wet ice according to industry standards. The ice in each container was weighed. Ambient temperatures were recorded by data loggers affixed to the exterior. Internal temperatures were recorded by data loggers packed inside the containers, for as long as the data loggers remained at ≤8°C. The cooling effect, or minutes per gram of ice a data logger maintained a temperature of ≤8°C, was calculated using linear regression; 8 similar containers were subjected to elevated summer temperatures. Small, medium, and large containers held mean masses of wet ice of 685, 1929, and 4439 g, respectively. The linear regression equation for grams of ice to duration of time at ≤8°C was y = 0.1994x + 385.13 for small containers, y = 0.1854x + 1273.3 for medium, and y = 0.5892x + 1410.3 for large containers, resulting in a cooling effect of 25.1 hours for small, 58.9 hours for medium, and 85.7 hours for large containers at ambient temperature. The duration of cooling effect in the summer profile group was consistent with that of the ambient temperature group. All of the container sizes successfully maintained proper cooling when packed with the appropriate grams of wet ice for the needed time interval. This study validates current practice for the shipment of corneal tissue in inexpensive, generic containers that can maintain effective cooling for the duration required for local, national, and international shipment.

Membrane proteins bind lipids selectively to modulate their structure and function.

PubMed

Laganowsky, Arthur; Reading, Eamonn; Allison, Timothy M; Ulmschneider, Martin B; Degiacomi, Matteo T; Baldwin, Andrew J; Robinson, Carol V

2014-06-05

Previous studies have established that the folding, structure and function of membrane proteins are influenced by their lipid environments and that lipids can bind to specific sites, for example, in potassium channels. Fundamental questions remain however regarding the extent of membrane protein selectivity towards lipids. Here we report a mass spectrometry approach designed to determine the selectivity of lipid binding to membrane protein complexes. We investigate the mechanosensitive channel of large conductance (MscL) from Mycobacterium tuberculosis and aquaporin Z (AqpZ) and the ammonia channel (AmtB) from Escherichia coli, using ion mobility mass spectrometry (IM-MS), which reports gas-phase collision cross-sections. We demonstrate that folded conformations of membrane protein complexes can exist in the gas phase. By resolving lipid-bound states, we then rank bound lipids on the basis of their ability to resist gas phase unfolding and thereby stabilize membrane protein structure. Lipids bind non-selectively and with high avidity to MscL, all imparting comparable stability; however, the highest-ranking lipid is phosphatidylinositol phosphate, in line with its proposed functional role in mechanosensation. AqpZ is also stabilized by many lipids, with cardiolipin imparting the most significant resistance to unfolding. Subsequently, through functional assays we show that cardiolipin modulates AqpZ function. Similar experiments identify AmtB as being highly selective for phosphatidylglycerol, prompting us to obtain an X-ray structure in this lipid membrane-like environment. The 2.3 Å resolution structure, when compared with others obtained without lipid bound, reveals distinct conformational changes that re-position AmtB residues to interact with the lipid bilayer. Our results demonstrate that resistance to unfolding correlates with specific lipid-binding events, enabling a distinction to be made between lipids that merely bind from those that modulate membrane protein structure and/or function. We anticipate that these findings will be important not only for defining the selectivity of membrane proteins towards lipids, but also for understanding the role of lipids in modulating protein function or drug binding.

Experimental and density functional theoretical investigations of linkage isomerism in six-coordinate FeNO(6) iron porphyrins with axial nitrosyl and nitro ligands.

PubMed

Novozhilova, Irina V; Coppens, Philip; Lee, Jonghyuk; Richter-Addo, George B; Bagley, Kimberly A

2006-02-15

A critical component of the biological activity of NO and nitrite involves their coordination to the iron center in heme proteins. Irradiation (330 < lambda < 500 nm) of the nitrosyl-nitro compound (TPP)Fe(NO)(NO(2)) (TPP = tetraphenylporphyrinato dianion) at 11 K results in changes in the IR spectrum associated with both nitro-to-nitrito and nitrosyl-to-isonitrosyl linkage isomerism. Only the nitro-to-nitrito linkage isomer is obtained at 200 K, indicating that the isonitrosyl linkage isomer is less stable than the nitrito linkage isomer. DFT calculations reveal two ground-state conformations of (porphine)Fe(NO)(NO(2)) that differ in the relative axial ligand orientations (i.e., GS parallel and GS perpendicular). In both conformations, the FeNO group is bent (156.4 degrees for GS parallel, 159.8 degrees for GS perpendicular) for this formally {FeNO}(6) compound. Three conformations of the nitrosyl-nitrito isomer (porphine)Fe(NO)(ONO) (MSa parallel, MSa perpendicular, and MSa(L)) and two conformations of the isonitrosyl-nitro isomer (porphine)Fe(ON)(NO(2)) (MSb parallel and MSb perpendicular) are identified, as are three conformations of the double-linkage isomer (porphine)Fe(ON)(ONO) (MSc parallel, MSc perpendicular, MSc(L)). Only 2 of the 10 optimized geometries contain near-linear FeNO (MSa(L)) and FeON (MSc(L)) bonds. The energies of the ground-state and isomeric structures increase in the order GS < MSa < MSb < MSc. Vibrational frequencies for all of the linkage isomers have been calculated, and the theoretical gas-phase absorption spectrum of (porphine)Fe(NO)(NO(2)) has been analyzed to obtain information on the electronic transitions responsible for the linkage isomerization. Comparison of the experimental and theoretical IR spectra does not provide evidence for the existence of a double linkage isomer of (TPP)Fe(NO)(NO(2)).

MISSE 1 and 2 Tray Temperature Measurements

NASA Technical Reports Server (NTRS)

Harvey, Gale A.; Kinard, William H.

2006-01-01

The Materials International Space Station Experiment (MISSE 1 & 2) was deployed August 10,2001 and retrieved July 30,2005. This experiment is a co-operative endeavor by NASA-LaRC. NASA-GRC, NASA-MSFC, NASA-JSC, the Materials Laboratory at the Air Force Research Laboratory, and the Boeing Phantom Works. The objective of the experiment is to evaluate performance, stability, and long term survivability of materials and components planned for use by NASA and DOD on future LEO, synchronous orbit, and interplanetary space missions. Temperature is an important parameter in the evaluation of space environmental effects on materials. The MISSE 1 & 2 had autonomous temperature data loggers to measure the temperature of each of the four experiment trays. The MISSE tray-temperature data loggers have one external thermistor data channel, and a 12 bit digital converter. The MISSE experiment trays were exposed to the ISS space environment for nearly four times the nominal design lifetime for this experiment. Nevertheless, all of the data loggers provided useful temperature measurements of MISSE. The temperature measurement system has been discussed in a previous paper. This paper presents temperature measurements of MISSE payload experiment carriers (PECs) 1 and 2 experiment trays.

Validity of a small low-cost triaxial accelerometer with integrated logger for uncomplicated measurements of postures and movements of head, upper back and upper arms.

PubMed

Dahlqvist, Camilla; Hansson, Gert-Åke; Forsman, Mikael

2016-07-01

Repetitive work and work in constrained postures are risk factors for developing musculoskeletal disorders. Low-cost, user-friendly technical methods to quantify these risks are needed. The aims were to validate inclination angles and velocities of one model of the new generation of accelerometers with integrated data loggers against a previously validated one, and to compare meaurements when using a plain reference posture with that of a standardized one. All mean (n = 12 subjects) angular RMS-differences in 4 work tasks and 4 body parts were <2.5° and all mean median angular velocity differences <5.0 °/s. The mean correlation between the inclination signal-pairs was 0.996. This model of the new generation of triaxial accelerometers proved to be comparable to the validated accelerometer using a data logger. This makes it well-suited, for both researchers and practitioners, to measure postures and movements during work. Further work is needed for validation of the plain reference posture for upper arms. Copyright © 2016 Elsevier Ltd and The Ergonomics Society. All rights reserved.

A Temperature-Monitoring Vaginal Ring for Measuring Adherence

PubMed Central

Boyd, Peter; Desjardins, Delphine; Kumar, Sandeep; Fetherston, Susan M.; Le-Grand, Roger; Dereuddre-Bosquet, Nathalie; Helgadóttir, Berglind; Bjarnason, Ásgeir; Narasimhan, Manjula; Malcolm, R. Karl

2015-01-01

Background Product adherence is a pivotal issue in the development of effective vaginal microbicides to reduce sexual transmission of HIV. To date, the six Phase III studies of vaginal gel products have relied primarily on self-reporting of adherence. Accurate and reliable methods for monitoring user adherence to microbicide-releasing vaginal rings have yet to be established. Methods A silicone elastomer vaginal ring prototype containing an embedded, miniature temperature logger has been developed and tested in vitro and in cynomolgus macaques for its potential to continuously monitor environmental temperature and accurately determine episodes of ring insertion and removal. Results In vitro studies demonstrated that DST nano-T temperature loggers encapsulated in medical grade silicone elastomer were able to accurately and continuously measure environmental temperature. The devices responded quickly to temperature changes despite being embedded in different thickness of silicone elastomer. Prototype vaginal rings measured higher temperatures compared with a subcutaneously implanted device, showed high sensitivity to diurnal fluctuations in vaginal temperature, and accurately detected periods of ring removal when tested in macaques. Conclusions Vaginal rings containing embedded temperature loggers may be useful in the assessment of product adherence in late-stage clinical trials. PMID:25965956

Development of Thermal Radiation Experiments Kit Based on Data Logger for Physics Learning Media

NASA Astrophysics Data System (ADS)

Permana, H.; Iswanto, B. H.

2018-04-01

Thermal Radiation Experiments Kit (TREK) based on data logger for physics learning media was developed. TREK will be used as a learning medium on the subject of Temperature and Heat to explain the concept of emissivity of a material in grade XI so that it can add variations of experiments which are commonly done such as thermal expansion, transfer of thermal energy (conduction, convection, and radiation), and specific heat capacity. DHT11 sensor is used to measure temperature and microcontroller Arduino-uno used as data logger. The object tested are in the form of coated glass thin films and aluminum with different colors. TREK comes with a user manual and student worksheet (LKS) to make it easier for teachers and students to use. TREK was developed using the ADDIE Development Model (Analyze, Design, Development, Implementation, and Evaluation). And validated by experts, physics teachers, and students. Validation instrument is a questionnaire with a five-item Likert response scale with reviewed aspect coverage: appropriate content and concepts, design, and user friendly. The results showed that TREK was excellent (experts 88.13%, science teachers 95.68%, and students 85.77%).

VAB Temperature and Humidity Study

NASA Technical Reports Server (NTRS)

Lane, John E.; Youngquist, Robert C.; Muktarian, Edward; Nurge, Mark A.

2014-01-01

In 2012, 17 data loggers were placed in the VAB to measure temperature and humidity at 10-minute intervals over a one-year period. In 2013, the data loggers were replaced with an upgraded model and slight adjustments to their locations were made to reduce direct solar heating effects. The data acquired by the data loggers was compared to temperature data provided by three wind towers located around the building. It was found that the VAB acts as a large thermal filter, delaying and reducing the thermal oscillations occurring outside of the building. This filtering is typically more pronounced at higher locations in the building, probably because these locations have less thermal connection with the outside. We surmise that the lower elevations respond more to outside temperature variations because of air flow through the doors. Temperatures inside the VAB rarely exceed outdoor temperatures, only doing so when measurements are made directly on a surface with connection to the outside (such as a door or wall) or when solar radiation falls directly on the sensor. A thermal model is presented to yield approximate filter response times for various locations in the building. Appendix A contains historical thermal and humidity data from 1994 to 2009.

Calculation of air movement in ice caves by using the CalcFlow method

NASA Astrophysics Data System (ADS)

Meyer, Christiane; Pflitsch, Andreas; Maggi, Valter

2017-04-01

We present a method to determine the air flow regime within ice caves by temperature loggers. Technical capabilities of conducting airflow measurements are restricted by the availability of energy at the ice cave study sites throughout the year. Though the knowledge of the airflow regime is a prerequisite for the understanding of the cave climate. By cross-correlating different time series of air temperature measurements inside a cave, we define the travel time of the air between the loggers, which corresponds to the time shift of best correlation, and use this result to derive the airflow speed. Then we estimate the temperature biases and scale factors for the temperature variations observed by the different loggers by a least squares adjustment. As quality control for bias and scale we use the formal errors of the estimation process. For the calculated airflow speed quality criteria are developed by use of a simulation study. Furthermore we will apply the method to temperature measurements in the static ice cave Schellenberger Eishöhle (Germany). In the end we show how the method can be used as an advanced filter for the separation of different signal contents of the temperature measurements.

X-ray Fluorescence Core Scanning of Oman Drilling Project Holes BT1B and GT3A Cores on D/V CHIKYU

NASA Astrophysics Data System (ADS)

Johnson, K. T. M.; Kelemen, P. B.; Michibayashi, K.; Greenberger, R. N.; Koepke, J.; Beinlich, A.; Morishita, T.; Jesus, A. P. M.; Lefay, R.

2017-12-01

The JEOL JSX-3600CA1 energy dispersive X-ray fluorescence core logger (XRF-CL) on the D/V Chikyu provides quantitative element concentrations of scanned cores. Scans of selected intervals are made on an x-y grid with point spacing of 5 mm. Element concentrations for Si, Al, Ti, Ca, Mg, Mn, Fe, Na, K, Cr, Ni, S and Zn are collected for each point on the grid. Accuracy of element concentrations provided by the instrument software is improved by applying empirical correction algorithms. Element concentrations were collected for 9,289 points from twenty-seven core intervals in Hole BT1B (basal thrust) and for 6,389 points from forty core intervals in Hole GT3A (sheeted dike-gabbro transition) of the Oman Drilling Project on the D/V Chikyu XRF-CL during Leg 2 of the Oman Drilling Project in August-September, 2017. The geochemical data are used for evaluating downhole compositional details associated with lithological changes, unit contacts and mineralogical variations and are particularly informative when plotted as concentration contour maps or downhole concentration diagrams. On Leg 2 additional core scans were made with X-ray Computed Tomography (X-ray CT) and infrared images from the visible-shortwave infrared imaging spectroscopy (IR) systems on board. XRF-CL, X-ray CT and IR imaging plots used together provide detailed information on rock compositions, textures and mineralogy that assist naked eye visual observations. Examples of some uses of XRF-CL geochemical maps and downhole data are shown. XRF-CL and IR scans of listvenite clearly show zones of magnesite, dolomite and the Cr-rich mica, fuchsite that are subdued in visual observation, and these scans can be used to calculate variations in proportions of these minerals in Hole BT1B cores. In Hole GT3A XRF-CL data can be used to distinguish compositional changes in different generations of sheeted dikes and gabbros and when combined with visual observations of intrusive relationships the detailed geochemical information can be used to infer temporal changes in parental magma compositions. Secondary sulfide mineralization and epidote-rich hydrothermal alteration zones in sheeted dikes and gabbros are clearly highlighted on element maps of S, Fe, Ca, Al, and Zn.

Tracking Clouds with low cost GNSS chips aided by the Arduino platform

NASA Astrophysics Data System (ADS)

Hameed, Saji; Realini, Eugenio; Ishida, Shinya

2016-04-01

The Global Navigation Satellite System (GNSS) is a constellation of satellites that is used to provide geo-positioning services. Besides this application, the GNSS system is important for a wide range of scientific and civilian applications. For example, GNSS systems are routinely used in civilian applications such as surveying and scientific applications such as the study of crustal deformation. Another important scientific application of GNSS system is in meteorological research. Here it is mainly used to determine the total water vapour content of the troposphere, hereafter Precipitable Water Vapor (PWV). However, both GNSS receivers and software have prohibitively high price due to a variety of reasons. To overcome this somewhat artificial barrier we are exploring the use of low-cost GNSS receivers along with open source GNSS software for scientific research, in particular for GNSS meteorology research. To achieve this aim, we have developed a custom Arduino compatible data logging board that is able to operate together with a specific low-cost single frequency GNSS receiver chip from NVS Technologies AG. We have also developed an open-source software bundle that includes a new Arduino core for the Atmel324p chip, which is the main processor used in our custom logger. We have also developed software code that enables data collection, logging and parsing of the GNSS data stream. Additionally we have comprehensively evaluated the low power characteristics of the GNSS receiver and logger boards. Currently we are exploring the use of several openly source or free to use for research software to map GNSS delays to PWV. These include the open source goGPS (http://www.gogps-project.org/) and gLAB (http://gage.upc.edu/gLAB) and the openly available GAMIT software from Massachusetts Institute of Technology (MIT). We note that all the firmware and software developed as part of this project is available on an open source license.

Seasonal micro-migration in a farm-island population of striated caracaras (Phalcoboenus australis) in the Falkland Islands.

PubMed

Harrington, Katie J; Pole-Evans, Suzan; Reeves, Micky; Bechard, Marc; Bobowski, Melissa; Barber, David R; Rexer-Huber, Kalinka; Lecomte, Nicolas; Bildstein, Keith L

2018-01-01

The extent to which seasonal changes in food availability affect small-scale movements in free-ranging populations of birds of prey is relatively little studied. Here we describe a seasonal "micro-migration" of a farm-island population of striated caracaras ( Phalcoboenus australis ) in the Falkland Islands in response to seasonal changes in the availability of seabird carcasses. We banded more than 450 individuals on Saunders Island, deployed archival and satellite GPS data loggers on 17 individuals, and monitored movements within and between two feeding areas on Saunders Island, a "marine-subsidized" site near seabird colonies and an anthropogenic "human-subsidized" farm site 16 km to the southeast. During 67 observation days between 2010 and 2015, resightings of 312 banded caracaras were greater at the marine-subsidized site during austral summer than winter, and the total daily resightings varied significantly between spring versus summer, summer versus winter, autumn versus spring, and autumn versus winter. Resightings were higher at the human-subsidized site in austral winter than summer and the total daily resightings varied significantly across all bi-seasonal comparisons. Resightings indicated that at least 12 of 197 birds (6.1%) moved between the human- and marine-subsidized sites at least once during the same winter, 15 of 335 birds (4.5%) did so in spring, none of 164 birds did so in summer, and 16 of 297 birds (5.4%) did so in autumn. Individuals fitted with archival GPS data loggers at the marine-subsidized site in summer maintained highly localized 95% kernel core areas (0.55 ± 0.12 km 2 [mean ± SD]), whereas those at the human-subsidized site in winter maintained larger 95% kernel core areas (3.8 ± 4.6 km 2 ). Two of 6 satellite-tagged individuals that summered at known caracara breeding colonies 80 km WNW of Saunders Island were subsequently resighted in winter at the human-subsidized site. Our results suggest that seasonal shifts in food resource availability drive seasonal micro-migrations in a farm-island population of striated caracaras, and that farm sites can be critical in providing nutritional resources for caracaras when naturally occurring marine-subsidized resources become less available. Our results have important implications for striated caracara spatial ecology and conservation, as increased winter survival could improve the status of this globally Near-Threatened population.

Initial geochemistry data of the Lake Ohrid (Macedonia, Albania) "DEEP" site sediment record: The ICDP SCOPSCO drilling project

NASA Astrophysics Data System (ADS)

Francke, Alexander; Wagner, Bernd; Krastel, Sebastian; Lindhorst, Katja; Mantke, Nicole; Klinghardt, Dorothea

2014-05-01

Lake Ohrid, located at the border of Macedonia and Albania is about 30 km long, 15 km wide and up to 290 m deep. Formed within a tectonic graben, Lake Ohrid is considered to be the oldest lake in Europe. The ICDP SCOPSCO (Scientific Collaboration of Past Speciation Conditions in Lake Ohrid) deep drilling campaign at Lake Ohrid in spring 2013 aimed (a) to obtain more precise information about the age and origin of the lake, (b) to unravel the seismotectonic history of the lake area including effects of major earthquakes and associated mass wasting events, (c) to obtain a continuous record containing information on volcanic activities and climate changes in the central northern Mediterranean region, and (d) to better understand the impact of major geological/environmental events on general evolutionary patterns and shaping an extraordinary degree of endemic biodiversity as a matter of global significance. Drilling was carried out by DOSECC (Salt Lake City, USA) using the DLDS (Deep Lake Drilling System) with a hydraulic piston corer for surface sediments and rotation drilling for harder, deeper sediments. Overall, about 2,100 m of sediment were recovered from 4 drill sites. At the "DEEP" site in the center of the lake, seismic data indicated a maximum sediment fill of ca. 700 m, of which the uppermost 568 m sediment were recovered. Initial data from core catcher samples and on-site susceptibility measurements indicate that the sediment sequence covers more than 1.2 million years and provides a continuous archive of environmental and climatological variability in the area. Currently, core opening, core description, XRF and MSCL -scanning, core correlation, and sub-sampling of the sediment cores from the "DEEP" site is conducted at the University of Cologne. High-resolution geochemical data obtained from XRF-scanning imply that the sediments from the "DEEP" site are highly sensitive to climate and environmental variations in the Balkan area over the last few glacial-interglacial cycles. Interglacial periods are characterized by high Ca counts, likely associated with a high content of calcite in the sediments. Previous studies have shown that the calcite contents in sediments from Lake Ohrid are predominantly triggered by precipitation of endogenic calcite resulting from enhanced photosynthesis and higher temperatures. Moreover, high Ca counts mostly correspond to low K counts indicating reduced clastic input and a denser vegetation cover in the catchment. In contrast, high K and low Ca counts characterize glacial periods, indicating reduced precipitation of endognic calcite and enhanced deposition of clastic material. The variations in Ca and K counts mainly represent climatic variations on a glacial-interglacial timescale. Inorganic geochemistry data shall also be used to improve the age control of the "DEEP" site sequence. First findings of macroscopic tephra horizons allow a preliminary age control on the sediment succession, and peaks in K, Sr, Zr, and magnetic susceptibility might indicate the occurrence of cryptotephralayers in the sediment sequence.

Prediction of parturition in bitches utilizing continuous vaginal temperature measurement.

PubMed

Geiser, B; Burfeind, O; Heuwieser, W; Arlt, S

2014-02-01

The objective of this study was to determine sensitivity and specificity of a body temperature decline in bitches to predict parturition. Temperature loggers were placed into the vaginal cavity of 16 pregnant bitches on day 56-61 after estimated ovulation or first mating. This measurement technique has been validated previously and enabled continuous sampling of body temperature. The temperature loggers were expelled from the vagina before delivery of the first pup. The computed values for specificity (77-92%) were higher than sensitivity (53-69%), indicating a more precise prognosis of parturition not occurring. In conclusion, our findings may assist interpreting vaginal temperature measurements in order to predict parturition in bitches. © 2013 Blackwell Verlag GmbH.

Development of autonomous gamma dose logger for environmental monitoring

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jisha, N. V.; Krishnakumar, D. N.; Surya Prakash, G.

2012-03-15

Continuous monitoring and archiving of background radiation levels in and around the nuclear installation is essential and the data would be of immense use during analysis of any untoward incidents. A portable Geiger Muller detector based autonomous gamma dose logger (AGDL) for environmental monitoring is indigenously designed and developed. The system operations are controlled by microcontroller (AT89S52) and the main features of the system are software data acquisition, real time LCD display of radiation level, data archiving at removable compact flash card. The complete system operates on 12 V battery backed up by solar panel and hence the system ismore » totally portable and ideal for field use. The system has been calibrated with Co-60 source (8.1 MBq) at various source-detector distances. The system is field tested and performance evaluation is carried out. This paper covers the design considerations of the hardware, software architecture of the system along with details of the front-end operation of the autonomous gamma dose logger and the data file formats. The data gathered during field testing and inter comparison with GammaTRACER are also presented in the paper. AGDL has shown excellent correlation with energy fluence monitor tuned to identify {sup 41}Ar, proving its utility for real-time plume tracking and source term estimation.« less

A micro-power precision amplifier for converting the output of light sensors to a voltage readable by miniature data loggers.

PubMed

Phillips, Nathan; Bond, Barbara J.

1999-07-01

To record photosynthetically active radiation (PAR) simultaneously at a number of points throughout a forest canopy, we developed a simple, inexpensive (< $10 US) current-to-voltage converter that processes the current generated by a photodiode radiation sensor to a voltage range that is recordable with a miniature data logger. The converter, which weighs less than 75 g and has a volume of only 100 cm(3), is built around an ultra-low power OP-90 precision operational amplifier, which consumes less than 0.5 mA at 9 V when converting the output of a Li-Cor LI-190SA quantum sensor exposed to photosynthetically active radiation (PAR) of 2500 &mgr;mol m(-2) s(-1) or only 5 &mgr;A in low light. A small 9-V battery thus powers the amplifier for more than 1000 h of continuous operation. Correlations between photometer readings and voltage output from the current-to-voltage converter were high and linear at both high and low PAR. Sixteen Li-Cor LI-190SA quantum sensors each equipped with current-to-voltage converters and connected to a miniature data logger were deployed in the upper branches of a Panamanian tropical rainforest canopy. Each unit performed reliably during a one- or two-week evaluation.

Development of autonomous gamma dose logger for environmental monitoring

NASA Astrophysics Data System (ADS)

Jisha, N. V.; Krishnakumar, D. N.; Surya Prakash, G.; Kumari, Anju; Baskaran, R.; Venkatraman, B.

2012-03-01

Continuous monitoring and archiving of background radiation levels in and around the nuclear installation is essential and the data would be of immense use during analysis of any untoward incidents. A portable Geiger Muller detector based autonomous gamma dose logger (AGDL) for environmental monitoring is indigenously designed and developed. The system operations are controlled by microcontroller (AT89S52) and the main features of the system are software data acquisition, real time LCD display of radiation level, data archiving at removable compact flash card. The complete system operates on 12 V battery backed up by solar panel and hence the system is totally portable and ideal for field use. The system has been calibrated with Co-60 source (8.1 MBq) at various source-detector distances. The system is field tested and performance evaluation is carried out. This paper covers the design considerations of the hardware, software architecture of the system along with details of the front-end operation of the autonomous gamma dose logger and the data file formats. The data gathered during field testing and inter comparison with GammaTRACER are also presented in the paper. AGDL has shown excellent correlation with energy fluence monitor tuned to identify 41Ar, proving its utility for real-time plume tracking and source term estimation.

feedr and animalnexus.ca: A paired R package and user-friendly Web application for transforming and visualizing animal movement data from static stations.

PubMed

LaZerte, Stefanie E; Reudink, Matthew W; Otter, Ken A; Kusack, Jackson; Bailey, Jacob M; Woolverton, Austin; Paetkau, Mark; de Jong, Adriaan; Hill, David J

2017-10-01

Radio frequency identification (RFID) provides a simple and inexpensive approach for examining the movements of tagged animals, which can provide information on species behavior and ecology, such as habitat/resource use and social interactions. In addition, tracking animal movements is appealing to naturalists, citizen scientists, and the general public and thus represents a tool for public engagement in science and science education. Although a useful tool, the large amount of data collected using RFID may quickly become overwhelming. Here, we present an R package (feedr) we have developed for loading, transforming, and visualizing time-stamped, georeferenced data, such as RFID data collected from static logger stations. Using our package, data can be transformed from raw RFID data to visits, presence (regular detections by a logger over time), movements between loggers, displacements, and activity patterns. In addition, we provide several conversion functions to allow users to format data for use in functions from other complementary R packages. Data can also be visualized through static or interactive maps or as animations over time. To increase accessibility, data can be transformed and visualized either through R directly, or through the companion site: http://animalnexus.ca, an online, user-friendly, R-based Shiny Web application. This system can be used by professional and citizen scientists alike to view and study animal movements. We have designed this package to be flexible and to be able to handle data collected from other stationary sources (e.g., hair traps, static very high frequency (VHF) telemetry loggers, observations of marked individuals in colonies or staging sites), and we hope this framework will become a meeting point for science, education, and community awareness of the movements of animals. We aim to inspire citizen engagement while simultaneously enabling robust scientific analysis.

Postnatal hypothermia and cold stress among newborn infants in Nepal monitored by continuous ambulatory recording.

PubMed

Ellis, M; Manandhar, N; Shakya, U; Manandhar, D S; Fawdry, A; Costello, A M

1996-07-01

To describe the pattern of hypothermia and cold stress after delivery among a normal neonatal population in Nepal; to provide practical advice for improving thermal care in a resource limited maternity hospital. The principal government funded maternity hospital in Kathmandu, Nepal, with an annual delivery rate of 15,000 (constituting 40% of all Kathmandu Valley deliveries), severe resource limitations (annual budget Pounds 250,000), and a cold winter climate provided the setting. Thirty five healthy term neonates not requiring special care were enrolled for study within 90 minutes of birth. Continuous ambulatory temperature monitoring, using microthermistor skin probes for forehead and axilla, a flexible rectal probe, and a black ball probe placed next to the infant for ambient temperature, was carried out. All probes were connected to a compact battery powered Squirrel Memory Logger, giving a temperature reading to 0.2 degree C at five minute intervals for 24 hours. Severity and duration of hypothermia, using cutoff values of core temperature less than 36 degrees C, 34 degrees C, and 32 degrees C; and cold stress, using cutoff values of skin-core (forehead-axilla) temperature difference greater than 3 degrees C and 4 degrees C were the main outcome measures. Twenty four hour mean ambient temperatures were generally lower than the WHO recommended level of 25 degrees C (median 22.3 degrees C, range 15.1-27.5 degrees C). Postnatal hypothermia was prolonged, with axillary core temperatures only reaching 36 degrees C after a mean of 6.4 hours (range 0-21.1; SD 4.6). There was persistent and increasing cold stress over the first 24 hours with the core-skin (axillary-forehead) temperature gap exceeding 3 degrees C for more than half of the first 24 hours. Continuous ambulatory recording identifies weak links in the "warm chain" for neonates. The severity and duration of thermal problems was greater than expected even in a hospital setting where some of the WHO recommendations had already been implemented.

Lake deposits record evidence of large post-1505 AD earthquakes in western Nepal

NASA Astrophysics Data System (ADS)

Ghazoui, Z.; Bertrand, S.; Vanneste, K.; Yokoyama, Y.; Van Der Beek, P.; Nomade, J.; Gajurel, A.

2016-12-01

According to historical records, the last large earthquake that ruptured the Main Frontal Thrust (MFT) in western Nepal occurred in 1505 AD. Since then, no evidence of other large earthquakes has been found in historical records or geological archives. In view of the catastrophic consequences to millions of inhabitants of Nepal and northern India, intense efforts currently focus on improving our understanding of past earthquake activity and complement the historical data on Himalayan earthquakes. Here we report a new record, based on earthquake-triggered turbidites in lakes. We use lake sediment records from Lake Rara, western Nepal, to reconstruct the occurrence of seismic events. The sediment cores were studied using a multi-proxy approach combining radiocarbon and 210Pb chronologies, physical properties (X-ray computerized axial tomography scan, Geotek multi-sensor core logger), high-resolution grain size, inorganic geochemistry (major elements by ITRAX XRF core scanning) and bulk organic geochemistry (C, N concentrations and stable isotopes). We identified several sequences of dense and layered fine sand mainly composed of mica, which we interpret as earthquake-triggered turbidites. Our results suggest the presence of a synchronous event between the two lake sites correlated with the well-known 1505 AD earthquake. In addition, our sediment records reveal five earthquake-triggered turbidites younger than the 1505 AD event. By comparison with historical archives, we relate one of those to the 1833 AD MFT rupture. The others may reflect successive ruptures of the Western Nepal Fault System. Our study sheds light on events that have not been recorded in historical chronicles. Those five MMI>7 earthquakes permit addressing the problem of missing slip on the MFT in western Nepal and reevaluating the risk of a large earthquake affecting western Nepal and North India.

Translation Stress Positively Regulates MscL-Dependent Excretion of Cytoplasmic Proteins

PubMed Central

Morra, Rosa; Del Carratore, Francesco; Muhamadali, Howbeer; Horga, Luminita Gabriela; Halliwell, Samantha

2018-01-01

ABSTRACT The apparent mislocalization or excretion of cytoplasmic proteins is a commonly observed phenomenon in both bacteria and eukaryotes. However, reports on the mechanistic basis and the cellular function of this so-called “nonclassical protein secretion” are limited. Here we report that protein overexpression in recombinant cells and antibiotic-induced translation stress in wild-type Escherichia coli cells both lead to excretion of cytoplasmic protein (ECP). Condition-specific metabolomic and proteomic analyses, combined with genetic knockouts, indicate a role for both the large mechanosensitive channel (MscL) and the alternative ribosome rescue factor A (ArfA) in ECP. Collectively, the findings indicate that MscL-dependent protein excretion is positively regulated in response to both osmotic stress and arfA-mediated translational stress. PMID:29382730

Development of software for geodynamic processes monitoring system

NASA Astrophysics Data System (ADS)

Kabanov, M. M.; Kapustin, S. N.; Gordeev, V. F.; Botygin, I. A.; Tartakovsky, V. A.

2017-11-01

This article justifies the usage of natural pulsed electromagnetic Earth's noises logging method for mapping anomalies of strain-stress state of Earth's crust. The methods and technologies for gathering, processing and systematization of data gathered by ground multi-channel geophysical loggers for monitoring geomagnetic situation have been experimentally tested, and software had been developed. The data was consolidated in a network storage and can be accessed without using any specialized client software. The article proposes ways to distinguish global and regional small-scale time-space variations of Earth's natural electromagnetic field. For research purposes, the software provides a way to export data for any given period of time for any loggers and displays measurement data charts for selected set of stations.

IODP/ICDP Expedition 364-Drilling the Cretaceous-Paleogene Chicxulub impact crater: Insights into large craters formation and their effect on life.

NASA Astrophysics Data System (ADS)

Gulick, S. P. S.; Morgan, J. V.; Fucugauchi, J. U.; Bralower, T. J.; Chenot, É.; Christeson, G. L.; Claeys, P.; Cockell, C. S.; Collins, G. S.; Coolen, M.; Gebhardt, C.; Goto, K.; Kring, D. A.; Xiao, L.; Lowery, C.; Mellett, C.; Ocampo-Torres, R.; Osinski, G. R.; Perez-Cruz, L. L.; Pickersgill, A.; Poelchau, M.; Rae, A.; Rasmussen, C.; Rebolledo-Vieyra, M.; Riller, U. P.; Sato, H.; Schmitt, D. R.; Smit, J.; Tikoo, S.; Tomioka, N.; Whalen, M. T.; Zylberman, W.; Jones, H.; Gareth, C.; Wittmann, A.; Lofi, J.; Yamaguchi, K. E.; Ferrière, L.

2016-12-01

An international project to drill the Chicxulub impact crater was conducted in April and May, 2016 as Expedition 364 of the International Ocean Discovery Program (IODP) and International Continental Scientific Drilling Project (ICDP). Site M0077 is located offshore Yucatan in the southern Gulf of Mexico. The target was to core the only pristine terrestrial peak ring and to measure physical properties of the entire borehole. Specific questions included: What rocks comprise a topographic peak ring? How are peak rings formed? How are rocks weakened during large impacts to allow them to collapse and form relatively wide, flat craters? What insights arise from biologic recovery in the Paleogene within a potentially "toxic" ocean basin? Are impact craters (including peak rings) habitats for life? Coring occurred from 503 - 1334.7 mbsf with nearly 100% recovery. Wireline logs were collected from ultra slimline tools to total depth including gamma ray, magnetic susceptibility, sonic, borehole fluid temperature and conductivity, resistivity data, borehole images, and a finely spaced vertical seismic profile. Stratigraphy cored included 110 m of Eocene and Paleocene carbonates, 130 m of allochthonous impactites, and 590 m of crustal basement with dikes. All cores were measured using a shipboard core logger (density, gamma ray, magnetic susceptibility and resistivity) and shorebased dual energy, 0.3 mm resolution CT scanner. These data allow us to: 1) refine numerical models of the formation of the Chicxulub impact structure; 2) place constraints on environmental perturbations that led to the K-Pg mass extinction; 3) improve simulations of impact craters on other planetary bodies; 4) examine deformation mechanisms for insights into how rocks weaken during impacts; 5) study impact generated hydrothermal systems and 6) understand the effects of impacts on the deep biosphere including as a habitat for microbial life with implications for evolution on Earth and astrobiology. Key results are that the Chicxulub peak ring is formed from fractured basement rocks that may host a subsurface biosphere. The impactite layer overlying the peak ring in turn provides insight into resurge and tsunami processes, while the Paleogene sediments contain the record of the recovery of life after the mass extinction event.

As the Egg Turns: Monitoring Egg Attendance Behavior in Wild Birds Using Novel Data Logging Technology

PubMed Central

Shaffer, Scott A.; Clatterbuck, Corey A.; Kelsey, Emma C.; Naiman, Alex D.; Young, Lindsay C.; VanderWerf, Eric A.; Warzybok, Pete; Bradley, Russell; Jahncke, Jaime; Bower, Geoff C.

2014-01-01

Egg turning is unique to birds and critical for embryonic development in most avian species. Technology that can measure changes in egg orientation and temperature at fine temporal scales (1 Hz) was neither readily available nor small enough to fit into artificial eggs until recently. Here we show the utility of novel miniature data loggers equipped with 3-axis (i.e., triaxial) accelerometers, magnetometers, and a temperature thermistor to study egg turning behavior in free-ranging birds. Artificial eggs containing egg loggers were deployed in the nests of three seabird species for 1–7 days of continuous monitoring. These species (1) turned their eggs more frequently (up to 6.5 turns h−1) than previously reported for other species, but angular changes were often small (1–10° most common), (2) displayed similar mean turning rates (ca. 2 turns h−1) despite major differences in reproductive ecology, and (3) demonstrated distinct diurnal cycling in egg temperatures that varied between 1.4 and 2.4°C. These novel egg loggers revealed high-resolution, three-dimensional egg turning behavior heretofore never measured in wild birds. This new form of biotechnology has broad applicability for addressing fundamental questions in avian breeding ecology, life history, and development, and can be used as a tool to monitor birds that are sensitive to disturbance while breeding. PMID:24887441

Comparison of the performance of the activPAL Professional physical activity logger to a discrete accelerometer-based activity monitor.

PubMed

Godfrey, A; Culhane, K M; Lyons, G M

2007-10-01

The aim of this study was to assess the accuracy of the 'activPAL Professional' physical activity logger by comparing its output to that of a proven discrete accelerometer-based activity monitor during extended measurements on healthy subjects while performing activities of daily living (ADL). Ten healthy adults, with unrestricted mobility, wore both the activPAL and the discrete dual accelerometer (Analog Devices ADXL202)-based activity monitor that recorded in synchronization with each other. The accelerometer derived data were then compared to that generated by the activPAL and a complete statistical and error analysis was performed using a Matlab program. This program determined trunk and thigh inclination angles to distinguish between sitting/lying, standing and stepping for the discrete accelerometer device and amount of time spent on each activity. Analysis was performed on a second-by-second basis and then categorized at 15s intervals in direct comparison with the activPAL generated data. Of the total time monitored (approximately 60 h) the detection accuracies for static and dynamic activities were approximately 98%. In a population of healthy adults, the data obtained from the activPAL Professional physical activity logger for both static and dynamic activities showed a close match to a proven discrete accelerometer data with an offset of approximately 2% between the two systems.

On the frequency response of a Wenglor particle-counting system for aeolian transport measurements

NASA Astrophysics Data System (ADS)

Bauer, Bernard O.; Davidson-Arnott, Robin G. D.; Hilton, Michael J.; Fraser, Douglas

2018-06-01

A commonly deployed particle-counting system for aeolian saltation flux, consisting of a Wenglor fork sensor and an Onset Hobo Pulse Input Adapter linked to an Onset Hobo Energy Logger Pro data logger, was tested for frequency response. The Wenglor fork sensor is an optical gate device that has very fast switching capacity that can accommodate the time of flight of saltating sand particles through the sensing volume with the exception of very fine sand or silt and very quickly moving particles. The Pulse Input Adapter, in contrast, imposes limitations on the frequency response of the system. The manufacturer of the pulse adapter specifies an upper limit of 120 Hz, although bench tests with an electronic pulse generator indicate that the frequency response of the Pulse Input Adapter, in isolation, is excellent up to 3000 Hz, with only small error (less than 1.6%) due to under-counting during data transfer intervals. A mechanical test of the integrated system (fork sensor, pulse input adapter, and data logger) demonstrates excellent performance up to about 700 Hz (less than 2% error), but significant under-counting above 1000 Hz for unknown reasons. This specific particle-counting system therefore has a frequency response that is well suited for investigation of the dynamics of aeolian saltation as typically encountered in most field conditions on coastal beaches with the exception of extreme wind events and very small particle sizes.

Design and Deployment of a General Purpose, Open Source LoRa to Wi-Fi Hub and Data Logger

NASA Astrophysics Data System (ADS)

DeBell, T. C.; Udell, C.; Kwon, M.; Selker, J. S.; Lopez Alcala, J. M.

2017-12-01

Methods and technologies facilitating internet connectivity and near-real-time status updates for in site environmental sensor data are of increasing interest in Earth Science. However, Open Source, Do-It-Yourself technologies that enable plug and play functionality for web-connected sensors and devices remain largely inaccessible for typical researchers in our community. The Openly Published Environmental Sensing Lab at Oregon State University (OPEnS Lab) constructed an Open Source 900 MHz Long Range Radio (LoRa) receiver hub with SD card data logger, Ethernet and Wi-Fi shield, and 3D printed enclosure that dynamically uploads transmissions from multiple wirelessly-connected environmental sensing devices. Data transmissions may be received from devices up to 20km away. The hub time-stamps, saves to SD card, and uploads all transmissions to a Google Drive spreadsheet to be accessed in near-real-time by researchers and GeoVisualization applications (such as Arc GIS) for access, visualization, and analysis. This research expands the possibilities of scientific observation of our Earth, transforming the technology, methods, and culture by combining open-source development and cutting edge technology. This poster details our methods and evaluates the application of using 3D printing, Arduino Integrated Development Environment (IDE), Adafruit's Open-Hardware Feather development boards, and the WIZNET5500 Ethernet shield for designing this open-source, general purpose LoRa to Wi-Fi data logger.

40 CFR 92.127 - Emission measurement accuracy.

Code of Federal Regulations, 2010 CFR

2010-07-01

... Emission measurement accuracy. (a) Good engineering practice dictates that exhaust emission sample analyzer... resolution read-out systems such as computers, data loggers, etc., can provide sufficient accuracy and...

40 CFR 92.127 - Emission measurement accuracy.

Code of Federal Regulations, 2014 CFR

2014-07-01

... Emission measurement accuracy. (a) Good engineering practice dictates that exhaust emission sample analyzer... resolution read-out systems such as computers, data loggers, etc., can provide sufficient accuracy and...

40 CFR 92.127 - Emission measurement accuracy.

Code of Federal Regulations, 2013 CFR

2013-07-01

... Emission measurement accuracy. (a) Good engineering practice dictates that exhaust emission sample analyzer... resolution read-out systems such as computers, data loggers, etc., can provide sufficient accuracy and...

40 CFR 92.127 - Emission measurement accuracy.

Code of Federal Regulations, 2012 CFR

2012-07-01

... Emission measurement accuracy. (a) Good engineering practice dictates that exhaust emission sample analyzer... resolution read-out systems such as computers, data loggers, etc., can provide sufficient accuracy and...

40 CFR 92.127 - Emission measurement accuracy.

Code of Federal Regulations, 2011 CFR

2011-07-01

... Emission measurement accuracy. (a) Good engineering practice dictates that exhaust emission sample analyzer... resolution read-out systems such as computers, data loggers, etc., can provide sufficient accuracy and...

Climate logging with a new rapid optical technique at siple dome

USGS Publications Warehouse

Bay, R.C.; Price, P.B.; Clow, G.D.; Gow, A.J.

2001-01-01

The dust logger design is based on a decade of experience in the use of light sources to measure optical properties of deep Antarctic ice. Light is emitted at the top of the instrument by side-directed LEDs, scattered or absorbed by dust in the ice surrounding the borehole, and collected in a downhole-pointing photomultiplier tube (PMT) a meter below. With this method the ice is sampled at ambient pressure in a much larger volume than is the case in a core study, and the entire length can be logged in one day. In ice in which scattering is dominated by bubbles, the absorption from dust impurities is perceived as a drop in signal, whereas in bubble-free ice the scattering from dust increases the light collected. We report on results obtained in Siple Dome Hole A in December 2000. The instrument measured increases in dust concentration extending over many meters during glacial maxima, as well as narrow spikes due to ??? 1 cm thick ash and dust bands of volcanic origin. Monte Carlo simulation is employed to clarify data analysis and predict the capabilities of future designs.

Fracture-network 3D characterization in a deformed chalk reservoir analogue -- the Laegerdorf case

DOE Office of Scientific and Technical Information (OSTI.GOV)

Koestler, A.G.; Reksten, K.

1995-09-01

Quantitative descriptions of 3D fracture networks in terms of fracture characteristics and connectivity are necessary for reservoir evaluation, management, and EOR programs of fractured reservoirs. The author`s research has focused on an analogue to North Sea fractured chalk reservoirs that is excellently exposed near Laegerdorf, northwest Germany. An underlying salt diapir uplifted and deformed Upper Cretaceous chalk; the cement industry now exploits it. The fracture network in the production wall of the quarry was characterized and mapped at different scales, and 12 profiles of the 230-m wide and 35-m high production wall were investigated as the wall receded 25 m.more » In addition, three wells were drilled into the chalk volume. The wells were cored and the wellbores were imaged with both the resistivity formation micro scanner (FMS) and the sonic circumferential borehole image logger (CBIL). The large amount of fracture data was analyzed with respect to parameters, such as fracture density distribution, orientation, and length distribution, and in terms of the representativity and predictability of data sets collected from restricted rock volumes.« less

Quaternary Turbidite Sedimentation in the Moresby Trough, Preliminary Observations from the Papua New Guinea S2S Study Area

NASA Astrophysics Data System (ADS)

Bentley, S. J.; Muhammad, Z.; Dickens, J.; Droxler, A.; Peterson, L.; Opdyke, B.

2004-12-01

Multicores and jumbo piston cores were collected from the Moresby Trough from the R/V Melville in March-April 204 to study patterns of off-shelf sediment flux from the Gulf of Papua to the deep sea over Pleistocene-Holocene timescales. The Moresby Trough represents the primary deep-sea sediment conduit linking the Source to Sink Gulf of Papua study area to the north with the Coral Sea Basin to the south. Core locations were navigated from the surface using dynamic positioning and multibeam bathymetric mosaics collected during the cruise. Selected cores have been analyzed using a multi-sensor core logger, X-radiography, granulometry, and Pb-210 geochronology. Most piston cores collected from the Moresby Trough contain abundant mafic sandy turbidites overlain by fine-grained hemipelagic deposits 1-2 m thick. X-radiographs of multicores reveal mostly bioturbated hemipelagics. However, one core, MV25-0403-24MC, was collected from the axis of a primary channel, and contains at least two fine-grained turbidites within the upper 0.5 m of sediment. The uppermost turbidite contains low but uniform activities of excess Pb-210, and may have been 15-20 cm thick at the time of deposition (i.e., before subsequent disruption by bioturbation), based on fabric and radiochemical evidence. Application of a simple box-model for physical mixing (i.e., during the flow) and subsequent decay suggests that the uppermost turbidite was deposited 70-120 years before present. Bioturbation has since reworked about 60% of the bed, suggesting that such beds will only escape destruction by bioturbation if they are > 10 cm thick, and are deposited more frequently than once per century. Based on these observations, we suggest that gravity flows are presently active in the Moresby trough, and may account for a significant fraction of the hemipelagic drape present in channel systems. However, fabric evidence for these thin, fine-grained beds may be obscured by subsequent bioturbation. Also, at some point in the past, possibly at the onset of the Holocene Transgression, the character of sediment flux to the Moresby Trough shifted from sandy mafic-rich sandy turbidity currents to much finer sediments, delivered downslope by both benthic flows and vertical flux through the water column.

Development and implementation of the software for visualization and analysis of data geophysical loggers

NASA Astrophysics Data System (ADS)

Gordeev, V. F.; Malyshkov, S. Yu.; Botygin, I. A.; Sherstnev, V. S.; Sherstneva, A. I.

2017-11-01

The general trend of modern ecological geophysics is changing priorities towards rapid assessment, management and prediction of ecological and engineering soil stability as well as developing brand new geophysical technologies. The article describes researches conducted by using multi-canal geophysical logger MGR-01 (developed by IMCES SB RAS), which allows to measure flux density of very low-frequency electromagnetic radiation. It is shown that natural pulsed electromagnetic fields of the earthen lithosphere can be a source of new information on Earth's crust and processes in it, including earthquakes. The device is intended for logging electromagnetic processes in Earth's crust, geophysical exploration, finding structural and lithological inhomogeneities, monitoring the geodynamic movement of Earth's crust, express assessment of seismic hazards. The data is gathered automatically from observation point network in Siberia

Flight experience with lightweight, low-power miniaturized instrumentation systems

NASA Technical Reports Server (NTRS)

Hamory, Philip J.; Murray, James E.

1992-01-01

Engineers at the NASA Dryden Flight Research Facility (NASA-Dryden) have conducted two flight research programs with lightweight, low-power miniaturized instrumentation systems built around commercial data loggers. One program quantified the performance of a radio-controlled model airplane. The other program was a laminar boundary-layer transition experiment on a manned sailplane. The purpose of this paper is to report NASA-Dryden personnel's flight experience with the miniaturized instrumentation systems used on these two programs. The paper will describe the data loggers, the sensors, and the hardware and software developed to complete the systems. The paper also describes how the systems were used and covers the challenges encountered to make them work. Examples of raw data and derived results will be shown as well. Finally, future plans for these systems will be discussed.

Development and testing of a tensiologger: a tensiometer with a built-in datalogger

NASA Astrophysics Data System (ADS)

Tuts, Valentijn; Ronchi, Benedicta; Diels, Jan

2014-05-01

Water-filled tensiometers are widely used for measuring matric potential in the range between 0 and approximately -90kPa in soils. When placed in variably-saturated soil horizons, they correctly measure the pressure head both in unsaturated and saturated conditions. Modern tensiometers consist of a porous ceramic cup filled with water that is connected to a pressure transducer. Tensiometers are commercially available in different models, and can be logged with data loggers. Logging requires either cabling to connect the tensiometers to a data logger, or a wireless connection. Cables hamper field operations and can be unpractical because of the distances involved. Commercially available systems with wireless data communication with a central datalogger do not come cheap. We therefore developed a simple water-filled tensiometer with a build-in datalogger, which we called a tensiologger. The tensiologger is assembled using a porous ceramic cup (Al2O3 sinter material with bubble point > 15 bar, UMS GmbH Munich, Germany) filled with degassed demineralised water for transferring the pressure head to the pressure transducer. This cup is screwed onto a small housing with a capsulated logger circuit consisting of a pressure transducer, a temperature sensor for temperature measurement and for temperature correction of the pressure transducer, a memory for 32k measurements, and a microcontroller for logging the data. This loggercircuit is screwed onto an extension tube of 25 mm diameter that contains a replaceable battery and an optical interface at the top (extending from the soil surface). The data can be retrieved from the logger by means of a readout unit that is placed over the optical interface. This readout unit is connected to a USB port of a portable PC with logger software developed in Visual Basic. The cost of all parts including the printed circuit board is 220€ (excluding labour cost for making screw connections and assembling). The tensiologger was tested over a 8-month period at a grassland site in Blegny, Belgium. We installed tensiologgers at three different locations along a slope and at 15, 45, and 75 cm depth. At the lowest topographic location, we measured groundwater levels with a diver, which allowed us to know when soil is saturated. During or after rainfall events, tension peaks were detected at all depths with a little retardation along the profile, and positive pressure head values were measured as the soil became saturated. Higher on the slope, where drilling problems impede piezometer installation, positive tensions were measured sporadically at 75 cm and 45 cm depth. In dry periods, air bubbles developed in the cups of the shallow tensiologgers, and so cups had to be refilled with degassed water.

Mechanosensitive Channels: Insights from Continuum-Based Simulations

PubMed Central

Tang, Yuye; Yoo, Jejoong; Yethiraj, Arun; Cui, Qiang; Chen, Xi

2009-01-01

Mechanotransduction plays an important role in regulating cell functions and it is an active topic of research in biophysics. Despite recent advances in experimental and numerical techniques, the intrinsic multiscale nature imposes tremendous challenges for revealing the working mechanisms of mechanosensitive channels. Recently, a continuum-mechanics based hierarchical modeling and simulation framework has been established and applied to study the mechanical responses and gating behaviors of a prototypical mechanosensitive channel, the mechanosensitive channel of large conductance (MscL) in bacteria Escherichia coli (E. coli), from which several putative gating mechanisms have been tested and new insights deduced. This article reviews these latest findings using the continuum mechanics framework and suggests possible improvements for future simulation studies. This computationally efficient and versatile continuum-mechanics based protocol is poised to make contributions to the study of a variety of mechanobiology problems. PMID:18787764

Relationship among eye and muzzle temperatures measured using digital infrared thermal imaging and vaginal and rectal temperatures in hair sheep and cattle.

PubMed

George, W D; Godfrey, R W; Ketring, R C; Vinson, M C; Willard, S T

2014-11-01

Digital infrared thermal imaging (DITI) using a thermal camera has potential to be a useful tool for the production animal industry. Thermography has been used in both humans and a wide range of animal species to measure body temperature as a method to detect injury or inflammation. The objective of these experiments was to compare the temperature of the eye (EYE) or muzzle (MUZ) measured using DITI to vaginal (VT) and rectal temperature (RT) as measures of core body temperature in hair sheep and beef cattle. In Exp.1 EYE, VT and RT were measured in lactating, multiparous hair sheep ewes (St. Croix White, n = 10, and Dorper × St. Croix White, n = 10) in a non-febrile state 5 times over a 48-h period. Data loggers were used to measure VT and a digital veterinary thermometer was used to measure RT. There was a high correlation (P < 0.001) between VT and RT (r = 0.95), EYE and RT (r = 0.76) and EYE and VT (r = 0.77). In Exp. 2 EYE, MUZ, VT and RT were measured in multiparous, lactating ewes (St. Croix White, n = 2, and Barbados Blackbelly, n = 12) at -12, -1, 0, 1, 2, 3, 4, 6, 12, 24, 36, and 48 h after being administered lipopolysaccharide (LPS; n = 7; 0.2 µg/kg BW, i.v.) or saline (n = 7; 0.5 mL, i.v.). Data loggers were used to measure VT and a digital veterinary thermometer was used to measure RT. When data were combined across treatments (LPS and saline) there was a high correlation (P < 0.001) between VT and RT (r = 0.96), EYE and RT (r = 0.82), MUZ and RT (r = 0.72), and EYE and VT (r = 0.93). In Exp. 3 EYE, MUZ, VT and RT were measured in multiparous, non-lactating, pregnant Senepol cattle (n = 44) between 0900 and 1200 h on a single day. A digital veterinary thermometer was used to measure both VT and RT. There was a high correlation (P < 0.001) between VT and RT (r = 0.78), a moderate correlation (P < 0.001) between VT and EYE (r = 0.52), RT and EYE (r = 0.58) and EYE and MUZ (r = 0.48). There was no correlation (P > 0.10) between RT or VT and MUZ. The findings of these three studies indicate that temperature of the eye, measured using DITI, can be used as an indicator of core body temperature in hair sheep and beef cattle as an alternative to using vaginal or rectal temperature.

Real-time Remote Data Online For Norris Geyser Basin in Yellowstone National Park

NASA Astrophysics Data System (ADS)

Perry, J. E.; Lowenstern, J. B.; Clor, L.; Cervelli, P. F.; Allen, S. T.; Heasler, H.; Moloney, T.

2010-12-01

Perry, John, Lowenstern, Jacob, Cervelli, Peter, Clor, Laura, Heasler, Henry, Allen, Scott, Moloney, Tim During June 2010, ten 900MHz wireless temperature data loggers (nodes) were installed around the Norris Geyser Basin to monitor geothermal features, streams and soil temperatures. The loggers can provide near real-time updates on temperature variations within 0.2 deg C due to hydrothermal discharges or subsurface fluid migration. Each sensor node is programmed to measure the temperature every two minutes and automatically upload data to the base station computer daily. The hardware consists of a waterproof case containing an M5 logger (made by Marathon Products, Inc.®) with internal memory, lithium D-cell batteries and a 900 MHz, 1-W-transceiver and 5 meter long Teflon-coated probe with a thermistor sensor. Tethered stub or panel antennas are oriented to optimize signal strength to the base station near the Norris Museum. A 0.61 meter-long base-station antenna located 10m high provides signal to the furthest node over 850 meters away with most being “line-of-sight”. A 20-meter coaxial cable and lightning grounding wire connects the base-station antenna to an Ethernet-radio connected to the YNP local-area network. A server located 26-km north at Mammoth Hot Springs requests data at regular intervals (normally daily), archives the information, and then sends it to the USGS for further archiving and internet distribution. During periods of unusual hydrothermal behavior, data can be requested as needed, and it is possible to set user-programmable alarm limits for notification. The RF network is designed to monitor changes from three different sub-basins at Norris (Gray Lakes, Steamboat-Echinus and Porcelain Basin), the main Tantalus Creek drainage, and five individual thermal features (Constant, Porkchop, Steamboat and Echinus Geysers, and Opalescent Spring). The logger installed in Nuphar Lake provides ambient temperatures controlled solely by local meteorological conditions. Soil temperature is measured near Vixen Geyser. The system will permit land managers, scientists and the public to keep track of changes to the hydrothermal system, including geyser eruptions, periodic basin-wide disturbances, or fluid-release events that may accompany or follow seismic activity.

Microprocessors: Laboratory Simulation of Industrial Control Applications.

ERIC Educational Resources Information Center

Gedeon, David V.

1981-01-01

Describes a course to make technical managers more aware of computer technology and how data loggers, programmable controllers, and larger computer systems interact in a hierarchical configuration of manufacturing process control. (SK)

High-Resolution Physical Properties Logging of the AND-1B Sediment Core - Opportunity for Detecting High-Frequency Signals of Paleoenvironmental Changes

NASA Astrophysics Data System (ADS)

Niessen, F.; Magens, D.; Kuhn, G.; Helling, D.

2008-12-01

Within the ANDRILL-MIS Project, a more than 1200 m long sediment core, dating back to about 13 Ma, was drilled beneath McMurdo Ice Shelf near Ross Island (Antarctica) in austral summer 2006/07 with the purpose of contributing to a better understanding of the Late Cenozoic history of the Antarctic Ice Sheet. One way to approach past ice dynamics and changes in the paleoenvironment quantitatively, is the analysis of high- resolution physical properties obtained from whole-core multi-sensor core logger measurements in which lithologic changes are expressed numerically. This is especially applicable for the repeating sequences of diatomites and diamictites in the upper half of the core with a prominent cyclicity between 140-300 mbsf. Rather abrupt high-amplitude variations in wet-bulk density (WBD) and magnetic susceptibility (MS) reflect a highly dynamic depositional system, oscillating between two main end-member types: a grounded ice sheet and open marine conditions. For the whole core, the WBD signal, ranging from 1.4 kg/cu.m in the diatomites to 2.3 kg/cu.m in diamictites from the lower part of the core, represents the influence of three variables: (i) the degree of compaction seen as reduction of porosities with depth of about 30 % from top to bottom, (ii) the clast content with clasts being almost absent in diatomite deposits and (iii) the individual grain density (GD). GD itself strongly reflects the variety of lithologies as well as the influence of cement (mainly pyrite and carbonate) on the matrix grain density. The calculation of residual porosities demonstrates the strong imprint of glacial loading for especially diamictites from the upper 150 m, pointing to a significant thickness of the overriding Pleistocene ice sheet. MS on the other hand mainly documents a marine vs. terrestrial source of sediments where the latter can be divided into younger local material from the McMurdo Volcanic Province and basement clasts from the Transantarctic Mountains. Values range over several orders of magnitude from <10 (10-5 SI) in the diatomites to 8000 (10-5 SI) in single clasts (mainly dolerite). Synchronous minima and maxima in both WBD and MS support dramatic changes in the depositional environment, driven by oscillations in ice extent in response to global climate fluctuations on orbital timescales. Superimposed on this, small-amplitude variations of high frequency are found within diatomite units. A rhythmic pattern of probably millennial to centennial pacing proposes an additional non-orbital forcing as control on system dynamics, at least during interglacials.

76 FR 44306 - Endangered Species; File No. 16146

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-25

.... Of the 160, 20 also would be tagged with satellite tags and data loggers (epoxy attachments) and acoustic transmitters (epoxy or drill carapace and attach with wire). All 20 would not necessarily be...

A Holocene Lake Record from Laguna Del Maule (LdM) in the Chilean Andes: Climatic and Volcanic Controls on Lake Depositional Dynamics

NASA Astrophysics Data System (ADS)

Valero-Garces, B. L.; Frugone Alvarez, M.; Barreiro-Lostres, F.; Carrevedo, M. L.; Latorre Hidalgo, C.; Giralt, S.; Maldonado, A.; Bernárdez, P.; Prego, R.; Moreno-Caballud, A.

2014-12-01

Central Chile is a tectonically active, drought-prone region sensitive to latitudinal variations in large-scale cold fronts associated with fluctuations of the Pacific subtropical high. Holocene high-resolution records of climate and volcanic events could help inform more on the frequency of extensive droughts as well as volcanic and seismic hazards. LdM is a high altitude, volcanic lake located in the Transition Southern Volcanic Zone (~36°S, 2200 m.a.s.l). The LdM volcanic field is a very seismically and volcanically active zone in the Andes, with several caldera-forming eruptions over the last 1.5 Ma, and intense postglacial activity. In 2013, we recovered over 40 m of sediment cores at four sites of LdM and collected > 20 km of seismic lines. The cores were imaged, their physical and geochemical properties analysed with a Geotek MSCL and XRF scanner respectively, and sampled for TOC, TIC, TS, TN, BioSi, and bulk mineralogy. The chronology was constructed with a Bayesian age-depth model including 210Pb-137Cs, the Quizapú volcanic ash (1932 AD) and 17 AMS 14C dates. The 4.8 m long composite sequence spans the Late glacial and Holocene.Sediments are massive to banded, quartz and plagioclase-rich silts with variable diatom (BioSi, 15- 30 %) and organic matter content (TOC, 1-5 %). Four main units have been defined based on sedimentological and geochemical composition. The transition from Unit 4 to 3 is ascribed to the onset of the Holocene; Unit 2 spans the mid Holocene, and Unit 1 the last 4 ka. Higher (lower) TOC, Br/Ti and Fe/Mn ratios in units 1 and 3 (2 and 4) suggest higher (lower) organic productivity in the lake and dominant oxic (anoxic) conditions at the bottom of the lake. Up to 17 ash and lapilli layers mark volcanic events, mostly grouped in units 1 and 3. Periods of higher lake productivity (units 1 and 3) are synchronous to higher frequency of volcanic events. Some climate transitions (LIA, 4ka, 8ka and 11ka) are evident in the LdM sequence underlining their paleohydrological regional significance.

Encourage student learning of hydraulic matters by the use of Arduino platform

NASA Astrophysics Data System (ADS)

Rodriguez Sinobas, Leonor; Granja García, Javier; Sánchez Calvo, Raúl

2014-05-01

Arduino is an open-source electronics prototyping platform based on flexible, easy-to-use hardware and software. It's intended for several purposes to anyone interested in creating interactive objects or environments. The hydraulic matters teach at the Agricultural Engineering School at the Technical University of Madrid deal with practical issues regarding the measurement of variables such as pressure, discharge, temperature and soil water content. Most of the data loggers available in the market for these variables at expensive and not always affordable. On the other hand, current students are eager to manage new technological devices thus, their skills could be oriented not only to the application of an electronic platform as Arduino to build low cost data loggers for different purposes, but to encourage their learning in the hydraulic matters improving their self esteem

Diving Simulation concerning Adélie Penguin

NASA Astrophysics Data System (ADS)

Ito, Shinichiro; Harada, Masanori

Penguins are sea birds that swim using lift and drag forces by flapping their wings like other birds. Although diving data can be obtained using a micro-data logger which has improved in recent years, all the necessary diving conditions for analysis cannot be acquired. In order to determine all these hard-to-get conditions, the posture and lift and drag forces of penguins were theoretically calculated by the technique used in the analysis of the optimal flight path of aircrafts. In this calculation, the actual depth and speed of the dive of an Adélie penguin (Pygoscelis adeliae) were utilized. Then, the calculation result and experimental data were compared, and found to be in good agreement. Thus, it is fully possible to determine the actual conditions of dive by this calculation, even those that cannot be acquired using a data logger.

Foraging behaviour and landscape utilisation by the endangered golden-crowned flying fox (Acerodon jubatus), the Philippines.

PubMed

de Jong, Carol; Field, Hume; Tagtag, Anson; Hughes, Tom; Dechmann, Dina; Jayme, Sarah; Epstein, Jonathan H; Epstein, Jonathan; Smith, Craig; Santos, Imelda; Catbagan, Davinio; Lim, Mundita; Benigno, Carolyn; Daszak, Peter; Newman, Scott

2013-01-01

Species of Old World fruit-bats (family Pteropodidae) have been identified as the natural hosts of a number of novel and highly pathogenic viruses threatening livestock and human health. We used GPS data loggers to record the nocturnal foraging movements of Acerodon jubatus, the Golden-crowned flying fox in the Philippines to better understand the landscape utilisation of this iconic species, with the dual objectives of pre-empting disease emergence and supporting conservation management. Data loggers were deployed on eight of 54 A. jubatus (two males and six females) captured near Subic Bay on the Philippine island of Luzon between 22 November and 2 December 2010. Bodyweight ranged from 730 g to 1002 g, translating to a weight burden of 3-4% of bodyweight. Six of the eight loggers yielded useful data over 2-10 days, showing variability in the nature and range of individual bat movements. The majority of foraging locations were in closed forest and most were remote from evident human activity. Forty-six discrete foraging locations and five previously unrecorded roost locations were identified. Our findings indicate that foraging is not a random event, with the majority of bats exhibiting repetitious foraging movements night-to-night, that apparently intact forest provides the primary foraging resource, and that known roost locations substantially underestimate the true number (and location) of roosts. Our initial findings support policy and decision-making across perspectives including landscape management, species conservation, and potentially disease emergence.

Using sutures to attach miniature tracking tags to small bats for multimonth movement and behavioral studies

USGS Publications Warehouse

Castle, Kevin T.; Weller, Theodore J.; Cryan, Paul M.; Hein, Cris D.; Schirmacher, Michael R.

2015-01-01

1. Determining the detailed movements of individual animals often requires them to carry tracking devices, but tracking broad-scale movement of small bats (< 30g) has been limited by transmitter technology and long-term attachment methods. This limitation inhibits our understanding of bat dispersal and migration, particularly in the context of emerging conservation issues like fatalities at wind turbines and diseases. 2. We tested a novel method of attaching lightweight global positioning system (GPS) tags and geolocating data loggers to small bats. We used monofilament, synthetic, absorbable sutures to secure GPS tags and data loggers to the skin of anesthetized big brown bats (Eptesicus fuscus) in Colorado and hoary bats (Lasiurus cinereus) in California. 3. GPS tags and data loggers were sutured to 17 bats in this study. Three tagged bats were recaptured seven months after initial deployment, with tags still attached; none of these bats showed ill effects from the tag. No severe injuries were apparent upon recapture of 6 additional bats that carried tags up to 26 days after attachment, however one of the bats exhibited skin chafing. 4. Use of absorbable sutures to affix small tracking devices seems to be a safe, effective method for studying movements of bats over multiple months, although additional testing is warranted. This new attachment method has the potential to quickly advance our understanding of small bats, particularly as more-sophisticated miniature tracking devices (e.g., satellite tags) become available.

Using sutures to attach miniature tracking tags to small bats for multimonth movement and behavioral studies.

PubMed

Castle, Kevin T; Weller, Theodore J; Cryan, Paul M; Hein, Cris D; Schirmacher, Michael R

2015-07-01

Determining the detailed movements of individual animals often requires them to carry tracking devices, but tracking broad-scale movement of small bats (<30 g) has been limited by transmitter technology and long-term attachment methods. This limitation inhibits our understanding of bat dispersal and migration, particularly in the context of emerging conservation issues such as fatalities at wind turbines and diseases. We tested a novel method of attaching lightweight global positioning system (GPS) tags and geolocating data loggers to small bats. We used monofilament, synthetic, absorbable sutures to secure GPS tags and data loggers to the skin of anesthetized big brown bats (Eptesicus fuscus) in Colorado and hoary bats (Lasiurus cinereus) in California. GPS tags and data loggers were sutured to 17 bats in this study. Three tagged bats were recaptured 7 months after initial deployment, with tags still attached; none of these bats showed ill effects from the tag. No severe injuries were apparent upon recapture of 6 additional bats that carried tags up to 26 days after attachment; however, one of the bats exhibited skin chafing. Use of absorbable sutures to affix small tracking devices seems to be a safe, effective method for studying movements of bats over multiple months, although additional testing is warranted. This new attachment method has the potential to quickly advance our understanding of small bats, particularly as more sophisticated miniature tracking devices (e.g., satellite tags) become available.

UAV Applications in Hydrology: A Case Study in Gökova Basin, Muğla, Turkey

NASA Astrophysics Data System (ADS)

Kurtulus, B.; Sağır, Ç.; Erdem, G.; Avşar; Kurtuluş, D. F.; Tunca, E.; Le Coz, M.; Razack, M.

2016-12-01

Adopting new technologies to hydrogeological studies is quite seldom at the present time. In the near future, successfully applications of Unmanned Air Vehicle (UAV) and small data logging system will be expected to show positive impact by encouraging the innovative designs and uses of these systems to monitor hydrosystem changes in local-to-regional ecosystems. Understanding of hydrosystem using these devices and the prediction of global/local change impacts on it has one of the highest scientific and socio-economic importance in Mediterranean zone. This study is a part of an ERANETMED project title as "Groundwater Resilience to Climate Change and High Pressure within an IWRM Approach". The main aim is to use of different types of drone and loggers equipped with visible/multispectral/thermal cameras for monitoring karstic springs, lakes, rivers etc... The advantages of this study are the ease of field data acquiring, fast and safe measurement process without making any harm to karstic springs by using hazardous materials and implement hi-tech instruments in hydrogeology studies. Therefore, in this study producing high resolution spatial and temporal hydrodynamic and physicochemical data of karst springs are collected by using drone and loggers. The preliminary results of drone images, logger data analysis and the possible application use of drones in hydrogeology domain will be presented in this study. In this regard, we would like to thank TUBITAK & ERANETMED (Project No: 115Y843) and the project members.

The Seven-Segment Data Logger

NASA Astrophysics Data System (ADS)

Bates, Alan

2015-12-01

Instruments or digital meters with data values visible on a seven-segment display can easily be found in the physics lab. Examples include multimeters, sound level meters, Geiger-Müller counters and electromagnetic field meters, where the display is used to show numerical data. Such instruments, without the ability to connect to computers or data loggers, can measure and display data at a particular instant in time. The user should be present to read the display and to record the data. Unlike these digital meters, the sensor-data logger system has the advantage of automatically measuring and recording data at selectable sample rates over a desired sample time. The process of adding data logging features to a digital meter with a seven-segment display can be achieved with Seven Segment Optical Character Recognition (SSOCR) software. One might ask, why not just purchase a field meter with data logging features? They are relatively inexpensive, reliable, available online, and can be delivered within a few days. But then there is the challenge of making your own instrument, the excitement of implementing a design, the pleasure of experiencing an entire process from concept to product, and the satisfaction of avoiding costs by taking advantage of available technology. This experiment makes use of an electromagnetic field meter with a seven-segment liquid crystal display to measure background electromagnetic field intensity. Images of the meter display are automatically captured with a camera and analyzed using SSOCR to produce a text file containing meter display values.

Structure-based membrane dome mechanism for Piezo mechanosensitivity

PubMed Central

Guo, Yusong R

2017-01-01

Mechanosensitive ion channels convert external mechanical stimuli into electrochemical signals for critical processes including touch sensation, balance, and cardiovascular regulation. The best understood mechanosensitive channel, MscL, opens a wide pore, which accounts for mechanosensitive gating due to in-plane area expansion. Eukaryotic Piezo channels have a narrow pore and therefore must capture mechanical forces to control gating in another way. We present a cryo-EM structure of mouse Piezo1 in a closed conformation at 3.7Å-resolution. The channel is a triskelion with arms consisting of repeated arrays of 4-TM structural units surrounding a pore. Its shape deforms the membrane locally into a dome. We present a hypothesis in which the membrane deformation changes upon channel opening. Quantitatively, membrane tension will alter gating energetics in proportion to the change in projected area under the dome. This mechanism can account for highly sensitive mechanical gating in the setting of a narrow, cation-selective pore. PMID:29231809

Measuring and mapping rock wall permafrost across Norway

NASA Astrophysics Data System (ADS)

Magnin, Florence; Etzelmuller, Bernd; Hilger, Paula; Westermann, Sebastian; Isaksen, Ketil; Hermans, Reginald

2017-04-01

The investigation of rock wall permafrost is of high relevance for geohazards assessment and for understanding cold-climate landscape evolution since its changes over time can cause slope instability and trigger rock falls. The destabilization of steep slopes is a serious threat to human activities and lives in Norway, especially because most of rock walls lie directly above houses, infrastructures and large water bodies with potential of high-energy displacement waves. Rock wall permafrost has been investigated since the early 2010s in alpine massifs of western Norway thanks to the CryoLINK project (2008-2011). The CryoWALL project (2015-2019) aims at extending this preliminary study to the nation-wide scale. It consists in systematic measurements of rock surface temperature (RST) in order model and to map the spatial distribution of rock wall permafrost. In between August 2015 and August 2016, 20 RST loggers (Geoprecision mini data loggers, accuracy ± 0.1°C, precision 0.01°C, sensors PT1000) were installed at 10 cm depth of 7 selected sites. These loggers are distributed along a latitudinal transect (from 60°50'N to 69°46'N), cover various elevations and sun-exposures, and are completed by 4 other loggers installed in Jotunheimen in 2009 and 2010. The RST time series are used for (a) characterizing the distribution of rock wall permafrost across Norway, (b) running steady-state and transient numerical models of rock wall permafrost at selected sites, and to (c) calibrate a general linear regression model that will be used to (d) predict the spatial distribution of rock wall permafrost at the national scale. In this communication we will introduce the RST measurement installations and sites, as well as the first RST records that encompass 6 years of continuous measurements in Jotunheimen, and 1 year of record for 13 other loggers. The preliminary analysis shows that RST differs by 3°C between N and S faces in Southern Norway, with mean annual RST as low as -1.9°C at 1700 m a.s.l in a N face (Nordfjord, Sogn of Fjordane) during the measurement year which was about 0.8°C above normal (1981-2010). In Northern Norway, the RST difference between N and S faces is rather around 1.5°C due to the midnight sun and polar night effects, inducing similar RST in both aspects during December, January, May and June. Negative mean annual RST is found as low as 1200 m a.s.l in S-exposed faces (Kåfjorden, Troms) during the measurement year which was 1.1°C above normal in this area. The ice and snow coating the rock faces during winter appears as a significant warming factor that can raise the mean annual RST up to at least 1°C compared to bare rock conditions. This first data set is shown to be of high relevance for predictive modelling.

ACEX: A First Look at Arctic Ocean Cenozoic History

NASA Astrophysics Data System (ADS)

Moran, K.; Backman, J.

2004-12-01

The first Integrated Ocean Drilling Program mission specificplatform expedition (ACEX - Arctic Coring Expedition) drilled and recovered core from five holes at four sites through Cenozoic sediments draping the crest of the Lomonosov Ridge in the central Arctic Ocean. Coring continued into the underlying Cretaceous sedimentary bedrock. Sites are located only a few nautical miles apart along a single seismic line (AWI-91090), showing an identical and coherent Cenozoic seismostratigraphy. Preliminary results from shipboard investigations of core-catcher-based bio- and lithostratigraphy, pore water analyses and core logger data describe a thick (~160 m) middle Miocene through Pleistocene sequence that shows large amplitude, cyclic variability in the density, magnetic susceptibility and acoustic velocity of the sediments. Sediments are largely carbonate free. Pleistocene sedimentation rates are close to 3 cm/ka, whereas Pliocene sediments are by-and-large missing. A sharp change in physical properties at ~200 m defines the transition into a 200+ m thick Paleogene sequence that is initially dominated by large numbers of dinoflagellate cysts. The early Miocene, Oligocene and late Eocene appear to be largely missing in a hiatus. However, a 32 m thick interval separates the overlying middle Miocene from the underlying middle Eocene and presumably preserves some of the early Neogene and late Paleogene sections. Dinoflagellate cysts, diatoms, ebridians and silicoflagellates are common to abundant in the middle Eocene section, which bottoms in a spectacular layer showing massive occurrences of glochidia and massulae (megaspores) of the freshwater hydropterid fern Azolla (duckweed) at the early/middle Eocene boundary (~306 m), suggesting strongly reduced surface water salinity or perhaps even a brief episode of fresh water conditions at the surface. Biosilica is not present prior to the late early Eocene (~320 m). The (sub-) tropical dinoflagellate species Apectodinium augustum occurs abundantly at around 380m in pyrite-rich mudstones, indicating that the Paleocene/Eocene boundary and the associated Carbon Isotope Excursion (CIE) interval were recovered, and that the Arctic Ocean experienced surface temperatures on the order of 20°C during the Paleocene Eocene Thermal Maximum (PETM). Benthic foraminifers indicate that the early Eocene through latest Paleocene sediments were deposited in shallow-marine, neritic to inner neritic, environments. The mudstone of late Paleocene age rests unconformably on Campanian marine sands, sandstone and mudstone.

Exploring Quadratic Functions with Logger "Pro"

ERIC Educational Resources Information Center

Pope, Derek

2018-01-01

The author shares the lesson that he used to introduce the quadratic unit to students in an extended second-year algebra class, demonstrate why it was appropriate for his struggling learners, and discuss possible future modifications to this lesson.

Fabrication of the Appalachian Thinner

Treesearch

Cleveland J. Biller

1982-01-01

The Appalachian Thinner, a prototype cable yarder, has proven capable of harvesting timber on steep slopes. Details of the fabrication of the prototype yarder are presented. An Appalachian Thinner can be built economically in a typical logger's repair shop.

Iowa Saw-Log Production and Sawmill Industry, 1969

Treesearch

James E. Blyth

1972-01-01

Iowa loggers harvested nearly 47 million board feet of saw logs in 1969. Leading species were soft maple, elm, red oak, and cottonwood. Three-fifths of the wood residue generated at 63 Iowa sawmills was not used.

A portable smoking pattern recorder.

PubMed

Creighton, D E; Noble, M J; Whewell, R T

1979-01-01

An instrument has been developed which can be used to record the smoking patterns of human smokers in almost any location. The smoker is required to smoke the cigarette through an orifice plate cigarette holder connected to the recorder. The smoking pattern data are recorded onto a standard audio cassette as pressure and flow signals together with timing impulses and speech. The instrument is battery powered and can be built into a small brief case. The four channels of data are decoded on a separate instrument, which uses the timing signals to synchronise a data logger, thus making the whole system independent of tape speed errors. The speech channel is used to identify the smoker, cigarette, location, etc. Comparisons have been made of the performance of the portable recorder and a laboratory smoking analyser and data logger. It was found that data decoded from the portable recorder are generally within 1% of the values recorded directly on the laboratory instrument.

Study of flight data recorder, underwater locator beacon, data logger and flarm collision avoidance system

NASA Astrophysics Data System (ADS)

Timi, Purnota Hannan; Shermin, Saima; Rahman, Asifur

2017-06-01

Flight data recorder is one of the most important sources of flight data in event of aviation disaster which records a wide range of flight parameters including altitude, airspeed, heading etc. and also helps monitoring and analyzing aircraft performance. Cockpit voice recorder records radio microphone transmissions and sounds in the cockpit. These devices help to find out and understand the root causes of aircraft crashes and help building better aircraft systems and technical solutions to prevent similar type of crashes in future, which lead to improvement in safety of aircrafts and passengers. There are other devices also which enhance the aircraft safety and assists in emergency or catastrophic situations. This paper discusses the concept of Flight Data Recorder (FDR), Cockpit Voice Recorder (CVR), Underwater Locator Beacon (ULB), Data logger and flarm-collision avoidance system for aircraft and their applications in aviation.

Microclimate monitoring of Ariadne's house (Pompeii, Italy) for preventive conservation of fresco paintings.

PubMed

Merello, Paloma; García-Diego, Fernando-Juan; Zarzo, Manuel

2012-11-28

Ariadne's house, located at the city center of ancient Pompeii, is of great archaeological value due to the fresco paintings decorating several rooms. In order to assess the risks for long-term conservation affecting the valuable mural paintings, 26 temperature data-loggers and 26 relative humidity data-loggers were located in four rooms of the house for the monitoring of ambient conditions. Data recorded during 372 days were analyzed by means of graphical descriptive methods and analysis of variance (ANOVA). Results revealed an effect of the roof type and number of walls of the room. Excessive temperatures were observed during the summer in rooms covered with transparent roofs, and corrective actions were taken. Moreover, higher humidity values were recorded by sensors on the floor level. The present work provides guidelines about the type, number, calibration and position of thermohygrometric sensors recommended for the microclimate monitoring of mural paintings in outdoor or semi-confined environments.

Data-acquisition system for environmental monitoring aboard a twin-engined aircraft

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tichler, J.; Bernstein, H.; Brown, R.M.

A number of experimental platforms have been used in support of the Multistate Atmospheric Power Production Study (MAP3S) and the Coastal Meteorology programs at Brookhaven National Laboratory. These platforms include a twin-engine Britten Norman Islander aircraft, a motorized van, a variety of boats and temporary enclosures set up in the field. Each platform carried a data logger consisting of a multiplexer, an analog to digital (A/D) converter and a four track endless loop magnetic tape for data storage. In recent years it has become increasingly evident that the data loggers in use were no longer adequate. Since the aircraft providedmore » the most constraints on the data acquisition system as well as being the most important research platform, a data system was designed for that platform with the secondary goal that the system would serve as a prototype for systems to be used on other platforms.« less

Pregnancy Suppresses the Daily Rhythmicity of Core Body Temperature and Adipose Metabolic Gene Expression in the Mouse.

PubMed

Wharfe, Michaela D; Wyrwoll, Caitlin S; Waddell, Brendan J; Mark, Peter J

2016-09-01

Maternal adaptations in lipid metabolism are crucial for pregnancy success due to the role of white adipose tissue as an energy store and the dynamic nature of energy needs across gestation. Because lipid metabolism is regulated by the rhythmic expression of clock genes, it was hypothesized that maternal metabolic adaptations involve changes in both adipose clock gene expression and the rhythmic expression of downstream metabolic genes. Maternal core body temperature (Tc) was investigated as a possible mechanism driving pregnancy-induced changes in clock gene expression. Gonadal adipose tissue and plasma were collected from C57BL/6J mice before and on days 6, 10, 14, and 18 of pregnancy (term 19 d) at 4-hour intervals across a 24-hour period. Adipose expression of clock genes and downstream metabolic genes were determined by quantitative RT-PCR, and Tc was measured by intraperitoneal temperature loggers. Adipose clock gene expression showed robust rhythmicity throughout pregnancy, but absolute levels varied substantially across gestation. Rhythmic expression of the metabolic genes Lipe, Pnpla2, and Lpl was clearly evident before pregnancy; however, this rhythmicity was lost with the onset of pregnancy. Tc rhythm was significantly altered by pregnancy, with a 65% decrease in amplitude by term and a 0.61°C decrease in mesor between days 6 and 18. These changes in Tc, however, did not appear to be linked to adipose clock gene expression across pregnancy. Overall, our data show marked adaptations in the adipose clock in pregnancy, with an apparent decoupling of adipose clock and lipolytic/lipogenic gene rhythms from early in gestation.

Towards a Community Environmental Observation Network

NASA Astrophysics Data System (ADS)

Mertl, Stefan; Lettenbichler, Anton

2014-05-01

The Community Environmental Observation Network (CEON) is dedicated to the development of a free sensor network to collect and distribute environmental data (e.g. ground shaking, climate parameters). The data collection will be done with contributions from citizens, research institutions and public authorities like communities or schools. This will lead to a large freely available data base which can be used for public information, research, the arts,..... To start a free sensor network, the most important step is to provide easy access to free data collection and -distribution tools. The initial aims of the project CEON are dedicated to the development of these tools. A high quality data logger based on open hardware and free software is developed and a software suite of already existing free software for near-real time data communication and data distribution over the Internet will be assembled. Foremost, the development focuses on the collection of data related to the deformation of the earth (such as ground shaking, surface displacement of mass movements and glaciers) and the collection of climate data. The extent to other measurements will be considered in the design. The data logger is built using open hardware prototyping platforms like BeagleBone Black and Arduino. Main features of the data logger are: a 24Bit analog-to-digital converter; a GPS module for time reference and positioning; wireless mesh networking using Optimized Link State Routing; near real-time data transmission and communication; and near real-time differential GNSS positioning using the RTKLIB software. The project CEON is supported by the Internet Foundation Austria (IPA) within the NetIdee 2013 call.

Wildlife contact analysis: Emerging methods, questions, and challenges

USGS Publications Warehouse

Cross, Paul C.; Creech, Tyler G.; Ebinger, Michael R.; Heisey, Dennis M.; Irvine, Kathryn M.; Creel, Scott

2012-01-01

Recent technological advances, such as proximity loggers, allow researchers to collect complete interaction histories, day and night, among sampled individuals over several months to years. Social network analyses are an obvious approach to analyzing interaction data because of their flexibility for fitting many different social structures as well as the ability to assess both direct contacts and indirect associations via intermediaries. For many network properties, however, it is not clear whether estimates based upon a sample of the network are reflective of the entire network. In wildlife applications, networks may be poorly sampled and boundary effects will be common. We present an alternative approach that utilizes a hierarchical modeling framework to assess the individual, dyadic, and environmental factors contributing to variation in the interaction rates and allows us to estimate the underlying process variation in each. In a disease control context, this approach will allow managers to focus efforts on those types of individuals and environments that contribute the most toward super-spreading events. We account for the sampling distribution of proximity loggers and the non-independence of contacts among groups by only using contact data within a group during days when the group membership of proximity loggers was known. This allows us to separate the two mechanisms responsible for a pair not contacting one another: they were not in the same group or they were in the same group but did not come within the specified contact distance. We illustrate our approach with an example dataset of female elk from northwestern Wyoming and conclude with a number of important future research directions.

Using UHF proximity loggers to quantify male-female interactions: a scoping study of estrous activity in cattle.

PubMed

O'Neill, C J; Bishop-Hurley, G J; Williams, P J; Reid, D J; Swain, D L

2014-12-10

Reproductive efficiency is an important determinant of profitable cattle breeding systems and the success of assisted reproductive techniques (ART) in wildlife conservation programs. Methods of estrous detection used in intensive beef and dairy cattle systems lack accuracy and remain the single biggest issue for improvement of reproductive rates and such methods are not practical for either large-scale extensive beef cattle enterprises or free-living mammalian species. Recent developments in UHF (ultra high frequency) proximity logger telemetry devices have been used to provide a continuous pair-wise measure of associations between individual animals for both livestock and wildlife. The objective of this study was to explore the potential of using UHF telemetry to identify the reproductive cycle phenotype in terms of intensity and duration of estrus. The study was conducted using Belmont Red (interbred Africander Brahman Hereford-Shorthorn) cattle grazing irrigated pasture on Belmont Research Station, northeastern Australia. The cow-bull associations from three groups of cows each with one bull were recorded over a 7-week breeding season and the stage of estrus was identified using ultrasonography. Telemetry data from bull and cows, collected over 4 8-day logger deployments, were log transformed and analyzed by ANOVA. Both the number and duration of bull-cow affiliations were significantly (P<0.001) greater in estrous cows compared to anestrus cows. These results support the development of the UHF technology as a hands-off and noninvasive means of gathering socio-sexual information on both wildlife and livestock for reproductive management. Crown Copyright © 2014. Published by Elsevier B.V. All rights reserved.

Physiological Responses to Thermal Stress and Exercise

NASA Astrophysics Data System (ADS)

Iyota, Hiroyuki; Ohya, Akira; Yamagata, Junko; Suzuki, Takashi; Miyagawa, Toshiaki; Kawabata, Takashi

The simple and noninvasive measuring methods of bioinstrumentation in humans is required for optimization of air conditioning and management of thermal environments, taking into consideration the individual specificity of the human body as well as the stress conditions affecting each. Changes in human blood circulation were induced with environmental factors such as heat, cold, exercise, mental stress, and so on. In this study, the physiological responses of human body to heat stress and exercise were investigated in the initial phase of the developmental research. We measured the body core and skin temperatures, skin blood flow, and pulse wave as the indices of the adaptation of the cardiovascular system. A laser Doppler skin blood flowmetry using an optical-sensor with a small portable data logger was employed for the measurement. These results reveal the heat-stress and exercise-induced circulatory responses, which are under the control of the sympathetic nerve system. Furthermore, it was suggested that the activity of the sympathetic nervous system could be evaluated from the signals of the pulse wave included in the signals derived from skin blood flow by means of heart rate variability assessments and detecting peak heights of velocity-plethysmogram.

Assessment of cold-chain maintenance in vaccine carriers during Pulse Polio National Immunization Day in a rural block of India.

PubMed

Pakhare, Abhijit P; Bali, Surya; Pawar, Radhakishan B; Lokhande, Ganesh S

2014-01-01

India was certified polio free on 27 March 2014. Supplementary immunization activities, in the form of national immunization days, is one of the core strategies for eradication, where oral polio vaccine is administered to children aged under 5 years throughout the country. Oral polio vaccine is heat sensitive and requires maintenance of a stringent cold chain. Therefore, vaccine carriers with ice packs are used in the Pulse Polio Immunization (PPI) programme. This study assessed whether the cold chain is maintained during National Immunization Day in Beed district. A cross-sectional study was conducted at six randomly selected booths, one each from six primary health centres in Georai block of Beed district in Maharashtra. Electronic data loggers, configured to measure half-hourly temperatures, were kept in vaccine carriers throughout the day of PPI. The vaccine carrier temperature was below 8 °C at all six booths; minimum temperature recorded was -9.5 °C, while the maximum was 4.5 °C. The vaccine vial monitor did not reach discard point in any booth. A vaccine carrier with four ice packs very effectively maintains the cold chain required for oral polio vaccine.

7 CFR 4284.3 - Definitions.

Code of Federal Regulations, 2014 CFR

2014-01-01

..., including farmers, ranchers, loggers, agricultural harvesters and fishermen, that engage in the production or harvesting of an agricultural product. Producers may or may not own the land or other production..., value of production, increased diversification of industry, higher labor force participation rates...

7 CFR 4284.3 - Definitions.

Code of Federal Regulations, 2012 CFR

2012-01-01

..., including farmers, ranchers, loggers, agricultural harvesters and fishermen, that engage in the production or harvesting of an agricultural product. Producers may or may not own the land or other production..., value of production, increased diversification of industry, higher labor force participation rates...

7 CFR 4284.3 - Definitions.

Code of Federal Regulations, 2013 CFR

2013-01-01

..., including farmers, ranchers, loggers, agricultural harvesters and fishermen, that engage in the production or harvesting of an agricultural product. Producers may or may not own the land or other production..., value of production, increased diversification of industry, higher labor force participation rates...

Refocusing Space Technology

NASA Technical Reports Server (NTRS)

1994-01-01

This video presents two examples of NASA Technology Transfer. The first is a Downhole Video Logger, which uses remote sensing technology to help in mining. The second example is the use of satellite image processing technology to enhance ultrasound images taken during pregnancy.

i Planta

USDA-ARS?s Scientific Manuscript database

This application was designed for farmers, agriculture researchers, and gardeners. The application includes a calculator, a data logger, and a GPS mapping function. It was designed for vegetable farming but can be used for open field applications. The calculator solves for the amount of pesticide,...

Hardwood thinning opportunities in the Lake States.

Treesearch

John A. Sturos

1986-01-01

The symposium presents and discusses new information on the hardwood resource, silviculture, harvesting, economics, and product potential from hardwood thinnings in the Lake States. Included are forest management perspectives from the logger, private industry, and state and federal forest managers.

Prediction of parturition in Holstein dairy cattle using electronic data loggers.

PubMed

Titler, M; Maquivar, M G; Bas, S; Rajala-Schultz, P J; Gordon, E; McCullough, K; Federico, P; Schuenemann, G M

2015-08-01

The objective of the present study was to assess the effect of parturition on behavioral activity [steps, standing time, lying time, lying bouts (LB), and duration of LB] 4 d before calving using electronic data loggers. Animals (n=132) from 3 herds were housed in similar freestall barns using a prepartum pen 21 d before the expected calving date and were moved into a contiguous individual maternity pen for parturition. Electronic data loggers were placed on a hind leg of prepartum heifers (heifers, n=33) and cows (cows, n=99) at 7±3 d before the expected calving date and removed at 14±3 d in milk. Calving ease (scale 1-4), parity, calving date and time, and stillbirth (born dead or died within 24h) were recorded. The number of steps (no./d), standing time (min/d), lying time (min/d), number of LB (no./d), and duration of LB (min/b) were recorded. Data were analyzed using MIXED procedures of SAS, adjusting for the herd effect. Only cows experiencing unassisted births (calving ease=1) were included in the study. An activity index was developed to predict calving time. Heifers and cows with unassisted births had significantly higher number of steps and longer standing time, decreased lying time, and more LB of shorter duration 24h before calving compared with d -4, -3, and -2. Additionally, the number of LB increased as both heifers and cows approached labor starting on d -2 and peaked at the day of calving. The time since the activity index increased over 50% to parturition did not differ between heifers and cows, and the activity index revealed the shift in activity on average 6h 14min (range from 2h to 14h 15min) before calf birth. This study provided evidence that heifers and cows approaching parturition showed a similar, but distinct, behavioral pattern that can be observed on average 6h before calf birth. The potential benefits of electronic data loggers as predictors of parturition along with proactive management practices should improve the overall survival and welfare of both the dam and calf. Copyright © 2015 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Feasibility of Bluetooth Data as a Surrogate Measure of Vehicle Operations

DOT National Transportation Integrated Search

2012-10-01

This research was designed as proof-of-concept study to investigate how Bluetooth data loggers can be used to collect vehicle : operational data over traditional vehicle counting methods. The reliability test included mapping areas for five antenna o...

Folksongs: Magic in Your Classroom.

ERIC Educational Resources Information Center

Seidman, Laurence I.

1985-01-01

Folksongs can be used with all students at all grade levels. Teacher guidelines are provided and three musical themes--whaling in New England, the California Gold Rush, and loggers and lumbering--are used to illustrate how to use folksongs in the classroom. (RM)

Timing and Duration of Flow in Ephemeral Streams of the Sierra Vista Subwatershed of the Upper San Pedro Basin, Cochise County, Southeastern Arizona

USGS Publications Warehouse

Gungle, Bruce

2006-01-01

Frequency, timing, and duration of streamflow were monitored in 20 ephemeral-stream channels across the Sierra Vista Subwatershed of the Upper San Pedro Basin, southeastern Arizona, during an 18-month period. One channel (Walnut Gulch) had Agricultural Research Service streamflow-gaging stations in place. The sediments of the remaining 19 ephemeral-stream channels were instrumented with multiple temperature loggers along the channel lengths. A thermograph-interpretation technique was developed in order to determine frequency, timing, and duration of streamflow in these channels. Streamflow onset was characterized by exceedance of a critical minimum drop in temperature within the channel sediments during any 15-minute interval, whereas streamflow cessation was identified by the local temperature minimum that immediately followed the critical temperature drop. All data for the 18-month period from December 1, 2000, to May 31, 2002, were analyzed in terms of monsoon (June 1 to September 19) and nonmonsoon (September 20 to May 31) periods. Nonmonsoon precipitation during the 2000-2002 study period (excludes October and November 2000) was 82 percent and 39 percent of the 30-year average, respectively, whereas monsoon precipitation during 2001 was 99 percent of the 30-year average. Ephemeral streamflow was detected at least once during the monitoring period at 87 percent of the monitoring sites (45 of the 52 sites that returned useful data; includes 4 streamflow-gaging stations). The summer monsoon period accounted for 82 percent of all streamflow events by number and 71 percent of all events by total streamflow duration. Nonmonsoon streamflow events peaked in number, total streamflow duration, and mean streamflow duration midway between the Huachuca Mountains and the San Pedro River on the west side of the subwatershed. These three streamflow parameters dropped off sharply about 10 kilometers from the mountain front. The number and total duration of nonmonsoon streamflows on the east side of the subwatershed trended downward with increased distance from the mountain fronts. Monsoon streamflow events were more evenly distributed across the subwatershed than nonmonsoon events, and the number and duration of streamflows generally trended upward with distance from the mountain fronts. Additional years of data are needed to determine whether these patterns are consistent year to year, or were due to randomness in the spatial distribution of precipitation. Streamflows in three ephemeral-stream channels were analyzed in detail. More than two-thirds of the streamflow events detected in each of these channels occurred at no more than one monitoring site along the channel length. In only one of the three channels-Garden Canyon-was a streamflow event detected at all logger sites along its length. Five temperature loggers provided data from urbanized areas, and these loggers detected streamflow more than 50 percent more often and of a duration nearly three times greater than did temperature loggers across the rural parts of the subwatershed. Because historical records do not indicate that more precipitation occurs in the urbanized area than in the rural areas, the increased frequency of flow detection in the urban area is attributed to an increase in runoff from the impervious surfaces throughout the urbanized area.

"Artificial intelligence" at streamgaging stations

Treesearch

R. B. Thomas

1985-01-01

Two types of problems are related to collecting hydrologic data at stream gaging stations. One includes the technical/logistical questions associated with measuring and transferring data for processing. Effort spent on these problems ranges from improving devices for sensing data to using electronic data loggers.

Measuring abnormal movements in free-swimming fish with accelerometers: implications for quantifying tag and parasite load.

PubMed

Broell, Franziska; Burnell, Celene; Taggart, Christopher T

2016-03-01

Animal-borne data loggers allow movement, associated behaviours and energy expenditure in fish to be quantified without direct observations. As with any tagging, tags that are attached externally may adversely affect fish behaviour, swimming efficiency and survival. We report on free-swimming wild Atlantic cod (Gadus morhua) held in a large mesocosm that exhibited distinctly aberrant rotational swimming (scouring) when externally tagged with accelerometer data loggers. To quantify the phenomenon, the cod were tagged with two sizes of loggers (18 and 6 g; <2% body mass) that measured tri-axial acceleration at 50 Hz. An automated algorithm, based on body angular rotation, was designed to extract the scouring movements from the acceleration signal (98% accuracy). The algorithm also identified the frequency pattern and associated energy expenditure of scouring in relation to tag load (% body weight). The average per cent time spent scouring (5%) was independent of tag load. The vector of the dynamic body acceleration (VeDBA), used as a proxy for energy expenditure, increased with tag load (r(2)=0.51), and suggests that fish with large tags spent more energy when scouring than fish with small tags. The information allowed us to determine potential detrimental effects of an external tag on fish behaviour and how these effects may be mitigated by tag size. The algorithm can potentially identify similar rotational movements associated with spawning, courtship, feeding and parasite-load shedding in the wild. The results infer a more careful interpretation of data derived from external tags and the careful consideration of tag type, drag, buoyancy and placement, as well as animal buoyancy and species. © 2016. Published by The Company of Biologists Ltd.

Creative Uses of Custom Electronics for Environmental Monitoring

NASA Astrophysics Data System (ADS)

Hicks, S.; Aufdenkampe, A. K.; Montgomery, D. S.

2012-12-01

The ability to build custom electronic devices specifically suited to a unique task has gotten easier and cheaper, thanks to the recent popularity of open source electronics platforms like Arduino. Using Arduino-based processor boards, we have been creating a variety of helpful devices to perform functions that would have been too expensive to implement with standard methods and commercial hardware. The Christina River Basin CZO is currently operating dozens of homemade dataloggers that are connected to different types of environmental sensors. Most of these Arduino loggers have been deployed for over a year, so our experiences with them and their sensors have taught us a lot about the reliability and accuracy of both the loggers and the sensors. Some loggers also have the capability for wireless radio or ethernet data transmission for reporting live data to web sites for instant graphing or archiving. Other Arduino devices have the ability to be controlled remotely through web sites or telephones, making it easy to remotely trigger sample pumps or valves. The open-source nature of Arduino means collaboration is easy because the circuit schematics and source code for programming the boards can be shared between users. And because Arduino devices are easy to use and program, we developed an interface board that allows educators to easily connect a variety of inexpensive environmental sensors to an Arduino board. Then the students can write and upload simple programs to interact with the sensors, making it a very effective tool for teaching electronics and environmental science at the same time. The flexibility and capability of electronics prototyping platforms like Arduino mean these simple boards can cheaply and effectively perform a countless number of tasks for projects in environmental science and education.

Performance of Encounternet Tags: Field Tests of Miniaturized Proximity Loggers for Use on Small Birds

PubMed Central

Levin, Iris I.; Zonana, David M.; Burt, John M.; Safran, Rebecca J.

2015-01-01

Proximity logging is a new tool for understanding social behavior as it allows for accurate quantification of social networks. We report results from field calibration and deployment tests of miniaturized proximity tags (Encounternet), digital transceivers that log encounters between tagged individuals. We examined radio signal behavior in relation to tag attachment (tag, tag on bird, tag on saline-filled balloon) to understand how radio signal strength is affected by the tag mounting technique used for calibration tests. We investigated inter-tag and inter-receiver station variability, and in each calibration test we accounted for the effects of antennae orientation. Additionally, we used data from a live deployment on breeding barn swallows (Hirundo rustica erythrogaster) to analyze the quality of the logs, including reciprocal agreement in dyadic logs. We evaluated the impact (in terms of mass changes) of tag attachment on the birds. We were able to statistically distinguish between RSSI values associated with different close-proximity (<5m) tag-tag distances regardless of antennae orientation. Inter-tag variability was low, but we did find significant inter-receiver station variability. Reciprocal agreement of dyadic logs was high and social networks were constructed from proximity tag logs based on two different RSSI thresholds. There was no evidence of significant mass loss in the time birds were wearing tags. We conclude that proximity loggers are accurate and effective for quantifying social behavior. However, because RSSI and distance cannot be perfectly resolved, data from proximity loggers are most appropriate for comparing networks based on specific RSSI thresholds. The Encounternet system is flexible and customizable, and tags are now light enough for use on small animals (<50g). PMID:26348329

Tax tips for forest landowners for the 2008 tax year

Treesearch

Linda Wang; John L. Greene

2009-01-01

This article summarizes key federal income tax provisions for forestland owners, foresters, loggers, forest product businesses, and tax practioners, and is current as of October 1, 2008.  Consult your tax and legal professionals for advice on your particular tax situation.

Estuarine intertidal sediment temperature variability in Zoster marina and Z. japonica habitats in Yaquina Bay, Oregon

EPA Science Inventory

Physical characterization of intertidal estuarine plant habitats over time may reveal distribution-limiting thresholds. Temperature data from loggers embedded in sediment in transects crossing Zostera marina and Z. japonica habitats in lower Yaquina Bay, Oregon display signific...

Great American Work Songs.

ERIC Educational Resources Information Center

Daniels, Elva S.

1983-01-01

A teaching unit uses the songs of sailors, loggers, coal miners, and other workers to illustrate how the United States was built in the nineteenth century. Words and music for seven songs are given, along with classroom activities to help children understand occupations and industries during that time. (PP)

Monitoring tools of COMPASS experiment at CERN

NASA Astrophysics Data System (ADS)

Bodlak, M.; Frolov, V.; Huber, S.; Jary, V.; Konorov, I.; Levit, D.; Novy, J.; Salac, R.; Tomsa, J.; Virius, M.

2015-12-01

This paper briefly introduces the data acquisition system of the COMPASS experiment and is mainly focused on the part that is responsible for the monitoring of the nodes in the whole newly developed data acquisition system of this experiment. The COMPASS is a high energy particle experiment with a fixed target located at the SPS of the CERN laboratory in Geneva, Switzerland. The hardware of the data acquisition system has been upgraded to use FPGA cards that are responsible for data multiplexing and event building. The software counterpart of the system includes several processes deployed in heterogenous network environment. There are two processes, namely Message Logger and Message Browser, taking care of monitoring. These tools handle messages generated by nodes in the system. While Message Logger collects and saves messages to the database, the Message Browser serves as a graphical interface over the database containing these messages. For better performance, certain database optimizations have been used. Lastly, results of performance tests are presented.

The NASA rocky mountain space grant high altitude research balloon project

NASA Astrophysics Data System (ADS)

Moore, R. G.; Espy, P.

1994-02-01

A group of U.S. universities, under the auspices of NASA's Space Grant College and Fellowship Program, has initiated a super-pressure balloon research project to measure ozone column density in the atmosphere above 20 kilometers, together with stratospheric circulation between 20 km and 40 km, over the continental U.S.A. Data from a balloon-borne ultraviolet spectrometer, together with time, altitude, latitude and longitude information from a Global Positioning System receiver, are recorded at ten-minute intervals during daytime hours in an on-board solid-state data logger. Coded messages are transmitted nightly from selected amateur radio ground stations to a receiver in the balloon gondola to command the transmission of packet radio bursts from the data logger to the ground stations, for relay to a central data collection and analysis facility at Utah State University. Discussions are under way with radio amateurs and members of the international scientific balloon community regarding extension of flights to cover the earth's northern hemisphere.

The NASA rocky moutain space grant high altitude research balloon project

NASA Astrophysics Data System (ADS)

Moore, R. G.; Espy, P.

1994-02-01

A group of U.S. universities, under the auspices of NASA's Space Grant College and Fellowship Program, has initiated a super-pressure balloon research project to measure ozone column density in the atmosphere above 20 kilometers, together with stratospheric circulation between 20 km and 40 km, over the continental U.S.A. Data from a balloon-borne ultraviolet spectrometer, together with time, altitude, latitude and longitude information from a Global Positioning System reciever, are recorded at ten-minute intervals during daytime hours in an on-board solid-state data logger. Coded messages are transmitted nightly from selected amateur radio ground stations to a receiver in the balloon gondola to command transmission of packet radio bursts from the data logger to the ground stations, for relay to a central data collection and analysis facility at Utah State University. Discussions are under way with radio amateurs and members of the international scientific balloon community regarding extension of flights to cover the earth's northern hemisphere.

Microclimate monitoring of Ariadne’s house (Pompeii, Italy) for preventive conservation of fresco paintings

PubMed Central

2012-01-01

Background Ariadne’s house, located at the city center of ancient Pompeii, is of great archaeological value due to the fresco paintings decorating several rooms. In order to assess the risks for long-term conservation affecting the valuable mural paintings, 26 temperature data-loggers and 26 relative humidity data-loggers were located in four rooms of the house for the monitoring of ambient conditions. Results Data recorded during 372 days were analyzed by means of graphical descriptive methods and analysis of variance (ANOVA). Results revealed an effect of the roof type and number of walls of the room. Excessive temperatures were observed during the summer in rooms covered with transparent roofs, and corrective actions were taken. Moreover, higher humidity values were recorded by sensors on the floor level. Conclusions The present work provides guidelines about the type, number, calibration and position of thermohygrometric sensors recommended for the microclimate monitoring of mural paintings in outdoor or semi-confined environments. PMID:23190798

Long-term, high frequency in situ measurements of intertidal mussel bed temperatures using biomimetic sensors

PubMed Central

Helmuth, Brian; Choi, Francis; Matzelle, Allison; Torossian, Jessica L.; Morello, Scott L.; Mislan, K.A.S.; Yamane, Lauren; Strickland, Denise; Szathmary, P. Lauren; Gilman, Sarah E.; Tockstein, Alyson; Hilbish, Thomas J.; Burrows, Michael T.; Power, Anne Marie; Gosling, Elizabeth; Mieszkowska, Nova; Harley, Christopher D.G.; Nishizaki, Michael; Carrington, Emily; Menge, Bruce; Petes, Laura; Foley, Melissa M.; Johnson, Angela; Poole, Megan; Noble, Mae M.; Richmond, Erin L.; Robart, Matt; Robinson, Jonathan; Sapp, Jerod; Sones, Jackie; Broitman, Bernardo R.; Denny, Mark W.; Mach, Katharine J.; Miller, Luke P.; O’Donnell, Michael; Ross, Philip; Hofmann, Gretchen E.; Zippay, Mackenzie; Blanchette, Carol; Macfarlan, J.A.; Carpizo-Ituarte, Eugenio; Ruttenberg, Benjamin; Peña Mejía, Carlos E.; McQuaid, Christopher D.; Lathlean, Justin; Monaco, Cristián J.; Nicastro, Katy R.; Zardi, Gerardo

2016-01-01

At a proximal level, the physiological impacts of global climate change on ectothermic organisms are manifest as changes in body temperatures. Especially for plants and animals exposed to direct solar radiation, body temperatures can be substantially different from air temperatures. We deployed biomimetic sensors that approximate the thermal characteristics of intertidal mussels at 71 sites worldwide, from 1998-present. Loggers recorded temperatures at 10–30 min intervals nearly continuously at multiple intertidal elevations. Comparisons against direct measurements of mussel tissue temperature indicated errors of ~2.0–2.5 °C, during daily fluctuations that often exceeded 15°–20 °C. Geographic patterns in thermal stress based on biomimetic logger measurements were generally far more complex than anticipated based only on ‘habitat-level’ measurements of air or sea surface temperature. This unique data set provides an opportunity to link physiological measurements with spatially- and temporally-explicit field observations of body temperature. PMID:27727238

Long-term, high frequency in situ measurements of intertidal mussel bed temperatures using biomimetic sensors

NASA Astrophysics Data System (ADS)

Helmuth, Brian; Choi, Francis; Matzelle, Allison; Torossian, Jessica L.; Morello, Scott L.; Mislan, K. A. S.; Yamane, Lauren; Strickland, Denise; Szathmary, P. Lauren; Gilman, Sarah E.; Tockstein, Alyson; Hilbish, Thomas J.; Burrows, Michael T.; Power, Anne Marie; Gosling, Elizabeth; Mieszkowska, Nova; Harley, Christopher D. G.; Nishizaki, Michael; Carrington, Emily; Menge, Bruce; Petes, Laura; Foley, Melissa M.; Johnson, Angela; Poole, Megan; Noble, Mae M.; Richmond, Erin L.; Robart, Matt; Robinson, Jonathan; Sapp, Jerod; Sones, Jackie; Broitman, Bernardo R.; Denny, Mark W.; Mach, Katharine J.; Miller, Luke P.; O'Donnell, Michael; Ross, Philip; Hofmann, Gretchen E.; Zippay, Mackenzie; Blanchette, Carol; Macfarlan, J. A.; Carpizo-Ituarte, Eugenio; Ruttenberg, Benjamin; Peña Mejía, Carlos E.; McQuaid, Christopher D.; Lathlean, Justin; Monaco, Cristián J.; Nicastro, Katy R.; Zardi, Gerardo

2016-10-01

At a proximal level, the physiological impacts of global climate change on ectothermic organisms are manifest as changes in body temperatures. Especially for plants and animals exposed to direct solar radiation, body temperatures can be substantially different from air temperatures. We deployed biomimetic sensors that approximate the thermal characteristics of intertidal mussels at 71 sites worldwide, from 1998-present. Loggers recorded temperatures at 10-30 min intervals nearly continuously at multiple intertidal elevations. Comparisons against direct measurements of mussel tissue temperature indicated errors of ~2.0-2.5 °C, during daily fluctuations that often exceeded 15°-20 °C. Geographic patterns in thermal stress based on biomimetic logger measurements were generally far more complex than anticipated based only on ‘habitat-level’ measurements of air or sea surface temperature. This unique data set provides an opportunity to link physiological measurements with spatially- and temporally-explicit field observations of body temperature.

Evaluating the 4-hour and 30-minute rules: effects of room temperature exposure on red blood cell quality and bacterial growth.

PubMed

Ramirez-Arcos, Sandra; Mastronardi, Cherie; Perkins, Heather; Kou, Yuntong; Turner, Tracey; Mastronardi, Emily; Hansen, Adele; Yi, Qi-Long; McLaughlin, Natasha; Kahwash, Eiad; Lin, Yulia; Acker, Jason

2013-04-01

A 30-minute rule was established to limit red blood cell (RBC) exposure to uncontrolled temperatures during storage and transportation. Also, RBC units issued for transfusion should not remain at room temperature (RT) for more than 4 hours (4-hour rule). This study was aimed at determining if single or multiple RT exposures affect RBC quality and/or promote bacterial growth. Growth and RT exposure experiments were performed in RBCs inoculated with Serratia liquefaciens and Serratia marcescens. RBCs were exposed once to RT for 5 hours (S. liquefaciens) or five times to RT for 30 minutes (S. marcescens) with periodic sampling for bacterial counts. Noncontaminated units were exposed to RT once (5 hr) or five times (30 min each) and sampled to measure in vitro quality variables. RBC core temperature was monitored using mock units with temperature loggers. Growth and RT exposure experiments were repeated three and at least six times, respectively. Statistical analysis was done using mixed-model analysis. RBC core temperature ranged from 7.3 to 11.6°C during 30-minute RT exposures and the time to reach 10°C varied from 22 to 55 minutes during 5-hour RT exposures. RBC quality was preserved after single or multiple RT exposures. Increased growth of S. liquefaciens was only observed after 2 hours of continuous RT exposure. S. marcescens concentration increased significantly in multiple-exposed units compared to the controls but did not reach clinically important levels. Single or multiple RT exposures did not affect RBC quality but slightly promoted bacterial growth in contaminated units. The clinical significance of these results remains unclear and needs further investigation. © 2012 American Association of Blood Banks.

Diet-induced obesity reduces core body temperature across the estrous cycle and pregnancy in the rat.

PubMed

Crew, Rachael C; Waddell, Brendan J; Maloney, Shane K; Mark, Peter J

2018-04-16

Obesity during pregnancy causes adverse maternal and fetal health outcomes and programs offspring for adult-onset diseases, including cardiovascular disease. Obesity also disrupts core body temperature (T c ) regulation in nonpregnant rodents; however, it is unknown whether obesity alters normal maternal T c adaptations to pregnancy. Since T c is influenced by the circadian system, and both obesity and pregnancy alter circadian biology, it was hypothesized that obesity disrupts the normal rhythmic patterns of T c before and during gestation. Obesity was induced by cafeteria (CAF) feeding in female Wistar rats for 8 weeks prior to and during gestation, whereas control (CON) animals had free access to chow. Intraperitoneal temperature loggers measured daily T c profiles throughout the study, while maternal body composition and leptin levels were assessed near term. Daily temperature profiles were examined for rhythmic features (mesor, amplitude and acrophase) by cosine regression analysis. CAF animals exhibited increased fat mass (93%) and associated hyperleptinemia (3.2-fold increase) compared to CON animals. CAF consumption reduced the average T c (by up to 0.29°C) across the estrous cycle and most of pregnancy; however, T c for CAF and CON animals converged toward the end of gestation. Obesity reduced the amplitude of T c rhythms at estrus and proestrus and on day 8 of pregnancy, but increased the amplitude at day 20 of pregnancy. Photoperiod analysis revealed that obesity reduced T c exclusively in the light period during pre-pregnancy but only during the dark period in late gestation. In conclusion, obesity alters rhythmic T c profiles and reduces the magnitude of the T c decline late in rat gestation, which may have implications for maternal health and fetal development.

Development of minimum standards for event-based data collection loggers and performance measure definitions for signalized intersections [summary].

DOT National Transportation Integrated Search

2017-01-01

New traffic signal controllers, which have advanced data collection abilities, offer better information about the response of traffic signal timings to traffic flows. However, traffic engineers need more than raw data. The controllers must be set up ...

29 CFR 780.203 - Performance of operations on a farm but not by the farmer.

Code of Federal Regulations, 2010 CFR

2010-07-01

... on a farm undertaken on behalf of the farmer or on behalf of the buyer of the logs or the resulting lumber by a contract logger or sawmill owner are not within the scope of agriculture unless it can be...

Development of minimum standards for event-based data collection loggers and performance measure definitions for signalized intersections.

DOT National Transportation Integrated Search

2017-01-01

The arterial traffic signal performance measures were not used to their fullest potential in the past. The development of traffic signal controllers with event-based, high-resolution data logging capabilities enabled the advances in derivation and vi...

Improving Attachments of Non-Invasive (Type III) Electronic Data Loggers to Cetaceans

DTIC Science & Technology

2011-09-30

Micro texturing of the suction cup to reduced leakage: Objective: Use microtexturing to create a superhydrophobic barrier between the lip and the...surface area of a solid, thereby amplifying the natural hydrophobicity of a surface. Superhydrophobicity is created by interfacial tension forces that

The Wangan Boat.

ERIC Educational Resources Information Center

Killam, Alice Dow

1994-01-01

A former teacher reminisces about her teaching experiences during the 1920s in a rural school along the Aroostook River in Wade, Maine. Each year, when the boat carrying the cook for loggers upriver arrived, she and her students went aboard and received a special treat of warm molasses cake. (LP)

A New Approach to Logging.

ERIC Educational Resources Information Center

Miles, Donna

2001-01-01

In response to high numbers of preventable fatal accidents in the logging industry, the Occupational Safety and Health Administration (OSHA) developed a week-long logger safety training program that includes hands-on learning of safety techniques in the woods. Reaching small operators has been challenging; outreach initiatives in Maine, North…

A turnkey data logger program for field-scale energy flux density measurements using eddy covariance and surface renewal

USDA-ARS?s Scientific Manuscript database

Micrometeorological methods and ecosystem-scale energy and mass flux density measurements have become increasingly important in soil, agricultural, and environmental sciences. For many scientists without formal training in atmospheric science, these techniques are relatively inaccessible. Eddy cov...

INFLUENCE OF RESIDENTIAL HVAC DUTY CYCLE ON INDOOR AIR QUALITY

EPA Science Inventory

Measurements of duty cycle, the fraction of time the heating and cooling (HVAC) system was operating, were made in homes during the spring season of the RTP Particulate Matter Panel Study and the Tampa Asthmatic Children's Study. A temperature sensor/logger placed on an outlet...

Wireless sensor network for irrigation application in cotton

USDA-ARS?s Scientific Manuscript database

A wireless sensor network was deployed in a cotton field to monitor soil water status for irrigation. The network included two systems, a Decagon system and a microcontroller-based system. The Decagon system consists of soil volumetric water-content sensors, wireless data loggers, and a central data...

Structure-based membrane dome mechanism for Piezo mechanosensitivity.

PubMed

Guo, Yusong R; MacKinnon, Roderick

2017-12-12

Mechanosensitive ion channels convert external mechanical stimuli into electrochemical signals for critical processes including touch sensation, balance, and cardiovascular regulation. The best understood mechanosensitive channel, MscL, opens a wide pore, which accounts for mechanosensitive gating due to in-plane area expansion. Eukaryotic Piezo channels have a narrow pore and therefore must capture mechanical forces to control gating in another way. We present a cryo-EM structure of mouse Piezo1 in a closed conformation at 3.7Å-resolution. The channel is a triskelion with arms consisting of repeated arrays of 4-TM structural units surrounding a pore. Its shape deforms the membrane locally into a dome. We present a hypothesis in which the membrane deformation changes upon channel opening. Quantitatively, membrane tension will alter gating energetics in proportion to the change in projected area under the dome. This mechanism can account for highly sensitive mechanical gating in the setting of a narrow, cation-selective pore. © 2017, Guo et al.

3D anatomy of Heinrich Layer 2

NASA Astrophysics Data System (ADS)

van Rooij, D.; Zaazi, N.; Fagel, N.; Boone, M.; Cnudde, V.; Dewanckele, J.; Pirlet, H.; Rohl, U.; Blamart, D.; Henriet, J.-P.; Jacobs, P.; Houbrechts, H.; Duyck, P.; Swennen, R.

2009-04-01

Heinrich Layers are found in the North Atlantic Ocean as well-constrained markers of catastrophic iceberg surges from the Pan-Atlantic ice sheets during the last glacial cycle. Their physical and geochemical characteristics allow for relatively fast diagnostics using the state-of-the-art core scanners such as a Multi-Sensor Core Logger and an XRF core scanner. The nature of these characteristics are predominantly due to the source sediments of the ice-rafted debris (IRD) on the one hand (magnetic susceptibility, color, carbonate content) and the response of the palaeo-environment on the other hand (carbonate content, foraminiferal assemblage). However, changes in (gamma) bulk density of the sediment within a Heinrich Layer cannot solely be explained due to the higher content of IRD. Sediment cores in the Porcupine Seabight (West off Ireland) have shown the presence of Heinrich Events without the diagnostic changes in magnetic susceptibility (MS), suggesting a more drastic change in oceanography which could cause widespread diagenesis on the seabed during Heinrich Events. In order to better understand the physical behavior of a Heinrich Layer, 2 cores were studied taken from the northern Porcupine Seabight by R/V Marion Dufresne campaign MD123 in September 2001. More specifically HL2 was studied since it carries the most typical HL signature. The main anatomical information, with a resolution of 0.5 mm, was obtained by means of medical computed tomography of half-core sections of 50 cm length from the Ghent University Hospital. This information was used for detailed sampling for mineralogy, grainsize measurements and palaeoenvironmental analyses. On one core section, XRF core scanning was performed at a 0.5 cm interval. Higher-resolution information was obtained from five 8 cc subsamples which underwent µCT scanning and cold-cathode luminescence microscopy. The results of this unique approach show a rather surprising 3D view of a Heinrich Layer. As expected, the concentration of ice-rafted debris (commonly referred to as the fraction > 150 µm) increases towards the culmination of HL2, marked by an increase in MS, XRF Ca and the percentage of N. pachyderma s. However, the zone where the density increases is marked by a cloud of fine and highly dense particles surrounding the IRD. It seems as if the fine clayey "background" matrix throughout the core consolidates near the centre of HL2. The same feature has been observed within the µCT samples, where the cold-cathode luminescence microscopy has indicated the presence of zoned dolomites. These dolomites might be the result of a diagenetic process that might explain the elevated density. Moreover, the mineralogical analyses show for a predominant volcanic source for the magnetic susceptibility. Contrastingly, both XRF Fe and Ti show significant decreases near the HL culmination, which calls again for diagenetic alteration of the sediment during or just after the Heinrich Event. At this stage of the research, the mechanisms of these diagenetic processes remain unclear. Nevertheless, these results call for a wider view on the depositional processes of Heinrich Layers and their impact upon the seabed geochemistry.

Analysis of Environmental Data and Landscape Characterization on Multiple WetlandTypes Using Water Level Loggers and GIS Techniques in Tampa, FL

EPA Science Inventory

To better characterize the relationships between both adjacent hydrology/ precipitation and nutrient processing with groundwater level fluctuations, continuous water level data are being collected across three dominant wetland types, each with varied landscape characteristics. Th...

40 CFR 89.310 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2010 CFR

2010-07-01

... to § 89.323. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates... generally not be used. (2) Some high resolution read-out systems, such as computers, data loggers, and so..., using good engineering judgement, below 15 percent of full scale are made to ensure the accuracy of the...

40 CFR 86.1338-84 - Emission measurement accuracy.

Code of Federal Regulations, 2010 CFR

2010-07-01

... engineering practice dictates that exhaust emission sample analyzer readings below 15 percent of full scale... computers, data loggers, etc., can provide sufficient accuracy and resolution below 15 percent of full scale... spaced points, using good engineering judgement, below 15 percent of full scale are made to ensure the...

Modeling and Simulation Network Data Standards

DTIC Science & Technology

2011-09-30

COMBATXXI Movement Logger Data Output Dictionary. Field # Geocentric Coordinates (GCC) Heading Geodetic Coordinates (GDC) Heading Universal...B-8 Field # Geocentric Coordinates (GCC) Heading Geodetic Coordinates (GDC) Heading Universal Transverse Mercator (UTM) Heading...FKSM Fort Knox Supplemental Material FM field manual GCC geocentric coordinates GDC geodetic coordinates GIG global information grid

: Signal Decomposition of High Resolution Time Series River data to Separate Local and Regional Components of Conductivity

EPA Science Inventory

Signal processing techniques were applied to high-resolution time series data obtained from conductivity loggers placed upstream and downstream of a wastewater treatment facility along a river. Data was collected over 14-60 days, and several seasons. The power spectral densit...

Pressure-Height Properties of Water with Automated Data Collection

ERIC Educational Resources Information Center

Bates, Alan

2013-01-01

Instrumentation available for teachers and students has changed considerably during the last 20 years. The data logger-sensor system has the advantage of taking reliable measurements over time with suitable sample rates. This experiment is not an open-ended investigation but an opportunity to explore the established relationship between the…

Forestry BMP Implementation Costs for Virginia

Treesearch

R.M. Shaffer; H.L. Haney; E.G. Worrell; W.M. Aust

1998-01-01

Forestry Best Management Practices (BMPs) are operational techniques used to protect water quality during timber harvesting operations. The implementation cost of BMPs is important to loggers, forest landowners, and the forest industry. This study provides an estimate of BMP implementation cost on a per harvested acre basis for the coastal plain, Piedmont, and...

RELATIONSHIPS BETWEEN HABITAT ARRANGEMENT AND JUVENILE WINTER FLOUNDER DENSITY IN NARRAGANSETT BAY

EPA Science Inventory

We used aerial photography in conjunction with a 1-m beam trawl attached to a videocamera with GPS overwrite and a YSI water quality logger to quantify fish densities and characterize habitats in Narragansett Bay and in Rhode Island's coastal lagoons. We compared fish counts fro...

40 CFR 90.314 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2014 CFR

2014-07-01

... engineering practice. Adhere to the minimum requirements given in §§ 90.316 through 90.325 and § 90.409. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates that exhaust emission...) Some high resolution read-out systems, such as computers, data loggers, and so forth, can provide...

40 CFR 90.314 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2011 CFR

2011-07-01

... engineering practice. Adhere to the minimum requirements given in §§ 90.316 through 90.325 and § 90.409. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates that exhaust emission...) Some high resolution read-out systems, such as computers, data loggers, and so forth, can provide...

40 CFR 90.314 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2012 CFR

2012-07-01

... engineering practice. Adhere to the minimum requirements given in §§ 90.316 through 90.325 and § 90.409. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates that exhaust emission...) Some high resolution read-out systems, such as computers, data loggers, and so forth, can provide...

40 CFR 86.1338-84 - Emission measurement accuracy.

Code of Federal Regulations, 2013 CFR

2013-07-01

... engineering practice dictates that exhaust emission sample analyzer readings below 15 percent of full scale... computers, data loggers, etc., can provide sufficient accuracy and resolution below 15 percent of full scale... spaced points, using good engineering judgement, below 15 percent of full scale are made to ensure the...

40 CFR 89.310 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2011 CFR

2011-07-01

... to § 89.323. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates... generally not be used. (2) Some high resolution read-out systems, such as computers, data loggers, and so..., using good engineering judgement, below 15 percent of full scale are made to ensure the accuracy of the...

40 CFR 89.310 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2013 CFR

2013-07-01

... to § 89.323. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates... generally not be used. (2) Some high resolution read-out systems, such as computers, data loggers, and so..., using good engineering judgement, below 15 percent of full scale are made to ensure the accuracy of the...

40 CFR 86.1338-84 - Emission measurement accuracy.

Code of Federal Regulations, 2012 CFR

2012-07-01

... engineering practice dictates that exhaust emission sample analyzer readings below 15 percent of full scale... computers, data loggers, etc., can provide sufficient accuracy and resolution below 15 percent of full scale... spaced points, using good engineering judgement, below 15 percent of full scale are made to ensure the...

40 CFR 86.1338-84 - Emission measurement accuracy.

Code of Federal Regulations, 2011 CFR

2011-07-01

... engineering practice dictates that exhaust emission sample analyzer readings below 15 percent of full scale... computers, data loggers, etc., can provide sufficient accuracy and resolution below 15 percent of full scale... spaced points, using good engineering judgement, below 15 percent of full scale are made to ensure the...

40 CFR 90.314 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2013 CFR

2013-07-01

... engineering practice. Adhere to the minimum requirements given in §§ 90.316 through 90.325 and § 90.409. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates that exhaust emission...) Some high resolution read-out systems, such as computers, data loggers, and so forth, can provide...

40 CFR 89.310 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2012 CFR

2012-07-01

... to § 89.323. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates... generally not be used. (2) Some high resolution read-out systems, such as computers, data loggers, and so..., using good engineering judgement, below 15 percent of full scale are made to ensure the accuracy of the...

40 CFR 89.310 - Analyzer accuracy and specifications.

Code of Federal Regulations, 2014 CFR

2014-07-01

... to § 89.323. (c) Emission measurement accuracy—Bag sampling. (1) Good engineering practice dictates... generally not be used. (2) Some high resolution read-out systems, such as computers, data loggers, and so..., using good engineering judgement, below 15 percent of full scale are made to ensure the accuracy of the...

RELATIONSHIP BETWEEN HVAC SYSTEM OPERATION, AIR EXCHANGE RATE, AND INDOOR-OUTDOOR PARTICULATE MATTER RATIOS

EPA Science Inventory

Measurements of duty cycle , the fraction of time the heating and cooling (HVAC) system was operating, were made in each participant's home during the spring season of the RTP Particulate Matter Panel Study. A miniature temperature sensor/data logger combination placed on the ...

Improving Attachments of Non-Invasive (Type III) Electronic Data Loggers to Cetaceans

DTIC Science & Technology

2014-09-30

the assessment tag impact on animal health and well-being. Specifically, we are working to develop methods that will enable the accurate estimates...currently not available for any marine mammal, about animal health and activity has the potential to revolutionize how animals are cared for in these

Maya Traditional Knowledge: Preserving Forests in Guatemala.

ERIC Educational Resources Information Center

Bernstein, Jacob

1996-01-01

In the mountains of western Guatemala, Maya K'iche communities draw on extensive indigenous knowledge of the local ecosystem to manage sections of forest allocated as community responsibility for generations. Supported by spiritual beliefs, community elders seek to guide the use and preservation of the forest despite illegal loggers, corrupt…

Cost of wetland protection using a Christy cable yarder

Treesearch

Chris B. LeDoux; John E. Baumgras; Edwin S. Miyata

1990-01-01

Forest managers, loggers, land-use planners, and other decision makers need an understanding of estimating the cost of protecting wetlands using cable logging systems to harvest timber products. Results suggest that protection costs can range from $245 to $490 per acre depending on the degree of protection desired.

Factors Affecting the Productivity of Logging Crews Using Chain Saws and Wheeled Skidders in Tree-Length Aspen

Treesearch

Dennis P. Bradley; Frank E. Biltonen

1973-01-01

Describes the productivity of selected aspen pulpwood loggers in northern Minnesota. The most important factors affecting productivity were the ratio of harvested trees per acre to total trees per acre, harvested volume per acre, and the spacing of nonharvested trees

Primary forest products industry and industrial roundwood production, Michigan, 1969.

Treesearch

James E. Blyth; Allen H. Boelter

1971-01-01

Michigan loggers cut 173.8 million cubic feet of industrial roundwood products in 1969. Ninety percent was pulpwood and saw logs. Production is shifting from softwoods to hardwoods. The number of active primary wood-using mills declined rapidly from 1954 to 1969, but production per mill has expanded.

Cost of wetland protection using cable logging systems

Treesearch

Chris B. LeDoux; John E. Baumgras

1990-01-01

Forest managers, loggers, land-use planners, and other decision makers need an understanding of estimating the cost of protecting wetlands using cable logging systems to harvest timber products. Results suggest that protection costs can range from $244.75 to $489.50 per acre depending on the degree of protection desired.

40 CFR 49.4165 - Control equipment requirements.

Code of Federal Regulations, 2014 CFR

2014-07-01

..., except for § 60.18(c)(2) and (f)(2) for those utility flares operated with an electronically controlled...) Equipped with one of the following: (A) A continuous burning pilot flame. (B) An electronically controlled... electronically controlled automatic igniter, such as a chart recorder, data logger or similar devices; (vi...

40 CFR 49.4165 - Control equipment requirements.

Code of Federal Regulations, 2013 CFR

2013-07-01

..., except for § 60.18(c)(2) and (f)(2) for those utility flares operated with an electronically controlled...) Equipped with one of the following: (A) A continuous burning pilot flame. (B) An electronically controlled... electronically controlled automatic igniter, such as a chart recorder, data logger or similar devices; (vi...

Wireless sensor network for monitoring soil moisture and weather conditions

USDA-ARS?s Scientific Manuscript database

A wireless sensor network (WSN) was developed and deployed in three fields to monitor soil water status and collect weather data for irrigation scheduling. The WSN consists of soil-water sensors, weather sensors, wireless data loggers, and a wireless modem. Soil-water sensors were installed at three...

Soil moisture and plant canopy temperature sensing for irrigation application in cotton

USDA-ARS?s Scientific Manuscript database

A wireless sensor network was deployed in a cotton field to monitor soil water status for irrigation. The network included two systems, a Decagon system and a microcontroller-based system. The Decagon system consists of soil volumetric water-content sensors, wireless data loggers, and a central data...

Concepts and data-collection techniques used in a study of the unsaturated zone at a low-level radioactive-waste disposal site near Sheffield, Illinois

USGS Publications Warehouse

Healy, R.W.; DeVries, M.P.; Striegl, Robert G.

1986-01-01

A study of water and radionuclide movement through the unsaturated zone is being conducted at the low level radioactive waste disposal site near Sheffield, Illinois. Included in the study are detailed investigations of evapotranspiration, movement of water through waste trench covers, and movement of water and radionuclides (dissolved and gaseous) from the trenches. An energy balance/Bowen ratio approach is used to determine evapotranspiration. Precipitation, net radiation, soil-heat flux, air temperature and water vapor content gradients, wind speed, and wind direction are measured. Soil water tension is measured with tensiometers which are connected to pressure transducers. Meteorological sensors and tensiometers which are connected to pressure transducers. Meteorological sensors and tensiometers are monitored with automatic data loggers. Soil moisture contents are measured through small-diameter access tubes with neutron and gamma-ray attenuation gages. Data beneath the trenches are obtained through a 130-meter-long tunnel which extends under four of the trenches. Water samples are obtained with suction lysimeters, and samples of the geologic material are obtained with core tubes. These samples are analyzed for radiometric and inorganic chemistry. Gas samples are obtained from gas piezometers and analyzed for partial pressures of major constituents, Radon-222, tritiated water vapor, and carbon-14 dioxide. (USGS)

Body temperature stability achieved by the large body mass of sea turtles.

PubMed

Sato, Katsufumi

2014-10-15

To investigate the thermal characteristics of large reptiles living in water, temperature data were continuously recorded from 16 free-ranging loggerhead turtles, Caretta caretta, during internesting periods using data loggers. Core body temperatures were 0.7-1.7°C higher than ambient water temperatures and were kept relatively constant. Unsteady numerical simulations using a spherical thermodynamic model provided mechanistic explanations for these phenomena, and the body temperature responses to fluctuating water temperature can be simply explained by a large body mass with a constant thermal diffusivity and a heat production rate rather than physiological thermoregulation. By contrast, body temperatures increased 2.6-5.1°C in 107-152 min during their emergences to nest on land. The estimated heat production rates on land were 7.4-10.5 times the calculated values in the sea. The theoretical prediction that temperature difference between body and water temperatures would increase according to the body size was confirmed by empirical data recorded from several species of sea turtles. Comparing previously reported data, the internesting intervals of leatherback, green and loggerhead turtles were shorter when the body temperatures were higher. Sea turtles seem to benefit from a passive thermoregulatory strategy, which depends primarily on the physical attributes of their large body masses. © 2014. Published by The Company of Biologists Ltd.

Reconstructing Holocene hematite and goethite variations in the Indus Canyon to trace changes in the Asian monsoon system

NASA Astrophysics Data System (ADS)

Koehler, Cornelia; Clift, Peter; Pressling, Nicola; Limmer, David; Giosan, Liviu; Tabrez, Ali

2010-05-01

In order to study Holocene Asian monsoon variations, we reconstructed changes in chemical weathering by examining sediments from the Indus Canyon. During the late Holocene, the Asian monsoon system had periods of high and low intensities that influenced the civilisations living in its realm. For example, the demise of the Harappan civilisation has been linked to a weakened monsoon system around 4 ka. The sediments in the Indus Canyon, which originate from the River Indus and its Himalayan tributaries, provide an ideal, natural environmental archive of the South Asian monsoon system. In order to investigate the alternation between arid and humid monsoonal climatic conditions, variations are traced using the magnetic minerals hematite and goethite, which form under distinct environmental conditions: goethite is stable under humid conditions, whereas hematite forms from the dehydration of goethite under arid conditions. The two minerals are characterised and quantified using environmental magnetic measurements, as well as diffuse reflectance spectrometry. Combining both approaches will enable us to reconstruct variations in chemical weathering over time. Furthermore, because this is governed by temperature and the availability of moisture, our weathering record will allow us to understand monsoon variability during the Holocene and test whether summer rain intensity has been decreasing in SW Asia since 8 ka. In addition, the multi-component analysis of colour reflectance spectra identifies different mineral components including hematite/goethite, clay mineral mixtures, calcite and organics. We will present our results from the multi-sensor core logger equipped with a Minolta spectrometer, measuring both magnetic susceptibility and the optical properties of the split sediment cores. Initial results indicate the presence of hematite and goethite in the sediment. There is an increasing hematite content up the cores, indicating an aridification trend during the Holocene. The sediments are further analysed using the environmental magnetic proxies NRM, ARM and IRM to fully understand the mineral magnetic variations and to quantify hematite and goethite contributions. This work plays an integral part of a larger scale palaeoenvironmental project on Indus Canyon sediments.

Stratigraphic Reconstruction of a Late Pleistocene Cypress Forest Discovered on the Northern Gulf of Mexico Continental Shelf

NASA Astrophysics Data System (ADS)

Gonzalez Rodriguez, S. M.; Bentley, S. J.; Obelcz, J.; Truong, J. T.; DeLong, K. L.; Xu, K.; Harley, G. L.; Reese, C. A.; Caporaso, A.; Shen, Z.

2017-12-01

A previously buried bald cypress forest (Taxodium distichum) was discovered on the continental shelf, offshore of Orange Beach, Alabama, USA, in 20 m water depth. The forest was possibly exhumed by Hurricane Ivan in 2004, and is now exposed as stumps in life position in a trough located in the northern Gulf of Mexico continental shelf seafloor. We are investigating the local stratigraphy, paleo-landscape, and mode of forest preservation of this unique site. In August 2015 and July 2016, submersible vibracores (18 in total) were collected. Core analysis included: bulk density and imaging via Geotek multi sensor core logger, sediment grain size, structure, and organic content via loss-on-ignition. Selected samples have been dated using 14C and optically stimulated luminescence (OSL) methods. Multibeam and CHIRP subbottom bathymetry provide context for litho- and chrono-stratigraphy of the site. Integration of core lithostratigraphy and modern shelf bathymetry reveal Holocene transgressive sands blanketing diverse sedimentary facies that are truncated by the late Pleistocene-early Holocene ravinement. Deposits below the ravinement surface include interbedded sand and mud (exact age unknown, but possibly pertaining to a shallow marine environment), overlying a floodplain/swamp facies of woody debris, peat, and mud (provisionally dated by 14C to 41-45 ka). These units grade laterally into paleosols that appear to be 10-15 ka older, based on recently obtained preliminary OSL dates. Occurrence of paleosols and swamp deposits of broadly similar age and elevation suggests that the ancient landscape possessed topographic relief that allowed wetland and upland habitats to develop in close proximity. These new OSL dates enhance our initial hypothesis that floodplain aggradation in the area was a key factor that might have allowed forest preservation. The timing of temporary sea level rises (SLR) ca. 40 and 60 ka. with our 14C and preliminary OSL dates, suggests that floodplain aggradation associated with SLRs could have buried the swamp and forest sediments. Variable paleo-topography in the area at the time of burial provided enough sediment to keep the cypress forest blanketed, withstanding periods of erosion as sea level fluctuated through the late Pleistocene to Holocene, thus facilitating forest preservation.

The Inverse-Square Law with Data Loggers

ERIC Educational Resources Information Center

Bates, Alan

2013-01-01

The inverse-square law for the intensity of light received at a distance from a light source has been verified using various experimental techniques. Typical measurements involve a manual variation of the distance between a light source and a light sensor, usually by sliding the sensor or source along a bench, measuring the source-sensor distance…

Educational Electrical Appliance Power Meter and Logger

ERIC Educational Resources Information Center

Nunn, John

2013-01-01

The principles behind two different designs of inductive power meter are presented. They both make use of the microphone input of a computer which, together with a custom-written program, can record the instantaneous power of a domestic electrical appliance. The device can be built quickly and can be calibrated with reference to a known power…

Logging roads and log decks for wildlife habitat

Treesearch

William H. Healy

1989-01-01

Roads are essential to manage and use forest land. They can improve wildlife habitat and provide recreational opportunities. But roads are often controversial because they have so many different users-loggers, hikers, hunters, and off-road-vehicle drivers. Benefits to wildlife can be maximized and user conflicts minimized by careful planning and design. Decisions about...

Physiological and psychological impacts of extended work hours in logging operations

Treesearch

Dana Mitchell; Tom Gallagher

2007-01-01

A study was initiated in 2006 to develop an understanding of the considerations of using extended work hours in the logging industry in the southeastern United States. Through semistructured interviews, it was obvious that loggers were individually creating ways of successfully implementing extended working hours without understanding the impacts that extended working...

Skateboard/Longboard Speedometer Project

ERIC Educational Resources Information Center

Hare, Jonathan

2012-01-01

A simple, low-cost infrared LED speedometer is described that can be fitted to a skateboard, longboard or even a bicycle to measure speed. Notes on building, setting up and calibration are given. When used with a low-cost data logger, continuous measurements of speed can be made while out and about. The device forms an interesting science club…

Signal Decomposition of High Resolution Time Series River Data to Separate Local and Regional Components of Conductivity

EPA Science Inventory

Signal processing techniques were applied to high-resolution time series data obtained from conductivity loggers placed upstream and downstream of an oil and gas wastewater treatment facility along a river. Data was collected over 14-60 days. The power spectral density was us...

Conditioned Pupil Disposition, Autonomy, and Effective Use of ICT in Science Classrooms.

ERIC Educational Resources Information Center

Rodrigues, Susan

2003-01-01

Data from three projects (a CD-ROM of the periodic table, video animation on CD ROM, and data loggers) show how conditioned dispositions affect information/communications technology use. The projects demonstrate how students have been conditioned to work mindlessly in science classrooms, following the path of least cognitive demand and avoiding…

Using a Digital Video Camera to Study Motion

ERIC Educational Resources Information Center

Abisdris, Gil; Phaneuf, Alain

2007-01-01

To illustrate how a digital video camera can be used to analyze various types of motion, this simple activity analyzes the motion and measures the acceleration due to gravity of a basketball in free fall. Although many excellent commercially available data loggers and software can accomplish this task, this activity requires almost no financial…

Assessing the opportunity cost of implementing streamside management zone guidelines in eastern hardwood forests

Treesearch

Chris B. LeDoux

2006-01-01

Forest landowners, managers, loggers, land-use planners, and other decision/policy makers need to understand the opportunity cost associated with different levels of allowable management and required/voluntary protection in streamside management zones (SMZs). Four different logging technologies, two mature hardwood stands, three levels of streamside zone protection,...

Use of expert systems for integrated silvicultural planning

Treesearch

Chris B. LeDoux

1997-01-01

The use of silvicultural treatments in hardwood stands presents opportunities for increasing the growth and yield of quality sawtimber and enhancing the suitability of the site for use by numerous species of wildlife. Planners, loggers, and managers must consider multiple aspects of the ecosystem when making silvicultural decisions. In this paper we demonstrate an...

Coupled Oscillators: Interesting Experiments for High School Students

ERIC Educational Resources Information Center

Kodejška, C.; Lepil, O.; Sedlácková, H.

2018-01-01

This work deals with the experimental demonstration of coupled oscillators using simple tools in the form of mechanical coupled pendulums, magnetically coupled elastic strings or electromagnetic oscillators. For the evaluation of results the data logger Lab Quest Vernier and video analysis in the Tracker program were used. In the first part of…

The Seven-Segment Data Logger

ERIC Educational Resources Information Center

Bates, Alan

2015-01-01

Instruments or digital meters with data values visible on a seven-segment display can easily be found in the physics lab. Examples include multimeters, sound level meters, Geiger-Müller counters and electromagnetic field meters, where the display is used to show numerical data. Such instruments, without the ability to connect to computers or data…

Improving Attachments of Non-Invasive (Type III) Electronic Data Loggers to Cetaceans

DTIC Science & Technology

2013-09-30

logged using a netbook and USB analog to digital converter. Initial testing of the SSSCup was conducted on a common dolphin (Delphinus delphis) cadaver...cell and five pressure sensors (four to measure internal cup pressure and one for atmospheric pressure). Sensor data are logged using a netbook and

Solving wood chip transport problems with computer simulation.

Treesearch

Dennis P. Bradley; Sharon A. Winsauer

1976-01-01

Efficient chip transport operations are difficult to achieve due to frequent and often unpredictable changes in distance to market, chipping rate, time spent at the mill, and equipment costs. This paper describes a computer simulation model that allows a logger to design an efficient transport system in response to these changing factors.

Implementation guide for turbidity threshold sampling: principles, procedures, and analysis

Treesearch

Jack Lewis; Rand Eads

2009-01-01

Turbidity Threshold Sampling uses real-time turbidity and river stage information to automatically collect water quality samples for estimating suspended sediment loads. The system uses a programmable data logger in conjunction with a stage measurement device, a turbidity sensor, and a pumping sampler. Specialized software enables the user to control the sampling...

Hardwood log supply: a broader perspective

Treesearch

Iris Montague; Adri Andersch; Jan Wiedenbeck; Urs Buehlmann

2015-01-01

At regional and state meetings we talk with others in our business about the problems we face: log exports, log quality, log markets, logger shortages, cash flow problems, the weather. These are familiar talking points and real and persistent problems. But what is the relative importance of these problems for log procurement in different regions of...

Technoeconomic analysis of conventional logging systems operating from stump to landing

Treesearch

Raymond L. Sarles; William G. Luppold; William G. Luppold

1986-01-01

Analyzes technical and economic factors for six conventional logging systems suitable for operation in eastern forests. Discusses financial risks and business implications for loggers investing in high-production, state-of-the-art logging systems. Provides logging contractors with information useful as a preliminary guide for selection of equipment and systems....

Changes in the Logging Labor Force

Treesearch

Charles H. Wolf; Jean W. Nolley

1977-01-01

Employment in the logging industry dropped 28 percent between 1950 and 1970, while output of industrial roundwood increased 31 percent. Today's loggers are older, better educated, and more skilled. A large proportion are self-employed, many work less than a full year, and a substantial number have incomes below the poverty level. Mechanization of timber harvesting...

78 FR 71673 - Agency Information Collection Activities: Submission for the Office of Management and Budget (OMB...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-11-29

..., power reactors under construction, research and test reactors, agreement states, non-agreement states, as well as users of byproduct material (e.g. departments of health, medical centers, steel mills, well loggers, and radiographers.) 7. An estimate of the number of annual responses: 339. [[Page 71674...

A note on the collection and cleaning of water temperature data

Treesearch

Colin Sowder; E. Ashley Steel

2012-01-01

Inexpensive remote temperature data loggers have allowed for a dramatic increase of data describing water temperature regimes. This data is used in understanding the ecological functioning of natural riverine systems and in quantifying changes in these systems. However, an increase in the quantity of yearly temperature data necessitates complex data management,...

Developing a Webcam-Based Data Logger to Analyze Cosmic Rays in a Cloud Chamber

NASA Astrophysics Data System (ADS)

Nealon, Kelly; Bellis, Matt

2015-04-01

Muons from secondary cosmic rays provide students with an opportunity to interact with a natural phenomenon that relies both on special relativity and fairly sophisticated particle physics knowledge. In many physics departments, undergraduate students set up a pair of scintillators in coincidence to measure the rate of these muons and in some cases, measure their angular dependence, but this requires specialized and potentially expensive equipment. We have spent the past year formalizing a design of a cloud chamber that relies not on dry ice, but Peltier thermoelectric coolers, that can be built for about one hundred dollars worth of equipment. With this design we can see the tracks left by cosmic rays, however to turn it into a useful undergraduate physics lab requires some sort of data logger. This poster details our efforts to use an off-the-shelf webcam to trigger on the change in image when a cosmic ray track appears in the chamber. We use this to estimate the rate and angular dependence and compare our results to other measurements. The successes and limitations of this approach will be discussed.

Loggers and Forest Fragmentation: Behavioral Models of Road Building in the Amazon Basin

NASA Technical Reports Server (NTRS)

Arima, Eugenio Y.; Walker, Robert T.; Perz, Stephen G.; Caldas, Marcellus

2005-01-01

Although a large literature now exists on the drivers of tropical deforestation, less is known about its spatial manifestation. This is a critical shortcoming in our knowledge base since the spatial pattern of land-cover change and forest fragmentation, in particular, strongly affect biodiversity. The purpose of this article is to consider emergent patterns of road networks, the initial proximate cause of fragmentation in tropical forest frontiers. Specifically, we address the road-building processes of loggers who are very active in the Amazon landscape. To this end, we develop an explanation of road expansions, using a positive approach combining a theoretical model of economic behavior with geographic information systems (GIs) software in order to mimic the spatial decisions of road builders. We simulate two types of road extensions commonly found in the Amazon basin in a region: showing the fishbone pattern of fragmentation. Although our simulation results are only partially successful, they call attention to the role of multiple agents in the landscape, the importance of legal and institutional constraints on economic behavior, and the power of GIs as a research tool.

Landscape Utilisation, Animal Behaviour and Hendra Virus Risk.

PubMed

Field, H E; Smith, C S; de Jong, C E; Melville, D; Broos, A; Kung, N; Thompson, J; Dechmann, D K N

2016-03-01

Hendra virus causes sporadic fatal disease in horses and humans in eastern Australia. Pteropid bats (flying-foxes) are the natural host of the virus. The mode of flying-fox to horse transmission remains unclear, but oro-nasal contact with flying-fox urine, faeces or saliva is the most plausible. We used GPS data logger technology to explore the landscape utilisation of black flying-foxes and horses to gain new insight into equine exposure risk. Flying-fox foraging was repetitious, with individuals returning night after night to the same location. There was a preference for fragmented arboreal landscape and non-native plant species, resulting in increased flying-fox activity around rural infrastructure. Our preliminary equine data logger study identified significant variation between diurnal and nocturnal grazing behaviour that, combined with the observed flying-fox foraging behaviour, could contribute to Hendra virus exposure risk. While we found no significant risk-exposing difference in individual horse movement behaviour in this study, the prospect warrants further investigation, as does the broader role of animal behaviour and landscape utilisation on the transmission dynamics of Hendra virus.

Reviews Book: Enjoyable Physics Equipment: SEP Colorimeter Box Book: Pursuing Power and Light Equipment: SEP Bottle Rocket Launcher Equipment: Sciencescope GLE Datalogger Equipment: EDU Logger Book: Physics of Sailing Book: The Lightness of Being Software: Logotron Insight iLog Studio iPhone Apps Lecture: 2010 IOP Schools and Colleges Lecture Web Watch

NASA Astrophysics Data System (ADS)

2010-09-01

WE RECOMMEND Enjoyable Physics Mechanics book makes learning more fun SEP Colorimeter Box A useful and inexpensive colorimeter for the classroom Pursuing Power and Light Account of the development of science in the 19th centuary SEP Bottle Rocket Launcher An excellent resource for teaching about projectiles GLE Datalogger GPS software is combined with a datalogger EDU Logger Remote datalogger has greater sensing abilities Logotron Insight iLog Studio Software enables datlogging, data analysis and modelling iPhone Apps Mobile phone games aid study of gravity WORTH A LOOK Physics of Sailing Book journeys through the importance of physics in sailing The Lightness of Being Study of what the world is made from LECTURE The 2010 IOP Schools and Colleges Lecture presents the physics of fusion WEB WATCH Planet Scicast pushes boundaries of pupil creativity

Effects of low-density feeding on elk–fetus contact rates on Wyoming feedgrounds

USGS Publications Warehouse

Creech, Tyler G.; Cross, Paul C.; Scurlock, Brandon M.; Maichak, Eric J.; Rogerson, Jared D.; Henningsen, John C.; Creel, Scott

2012-01-01

High seroprevalance for Brucella abortus among elk on Wyoming feedgrounds suggests that supplemental feeding may influence parasite transmission and disease dynamics by altering the rate at which elk contact infectious materials in their environment. We used proximity loggers and video cameras to estimate rates of elk-to-fetus contact (the primary source of brucellosis transmission) during winter supplemental feeding. We compared contact rates during high-density and low-density (LD) feeding treatments that provided the same total amount of food distributed over different areas. Low-density feeding led to >70% reductions in total number of contacts and number of individuals contacting a fetus. Proximity loggers and video cameras provided similar estimates of elk–fetus contact rates. Elk contacted fetuses and random control points equally, suggesting that elk were not attracted to fetuses but encountered them incidentally while feeding. The modeled relationship between contact rate and disease prevalence is nonlinear and LD feeding may result in large reductions in brucellosis prevalence, but this depends on the amount of transmission that occurs on and off feedgrounds.

A Robust, Microwave Rain Gauge

NASA Astrophysics Data System (ADS)

Mansheim, T. J.; Niemeier, J. J.; Kruger, A.

2008-12-01

Researchers at The University of Iowa have developed an all-electronic rain gauge that uses microwave sensors operating at either 10 GHz or 23 GHz, and measures the Doppler shift caused by falling raindrops. It is straightforward to interface these sensors with conventional data loggers, or integrate them into a wireless sensor network. A disadvantage of these microwave rain gauges is that they consume significant power when they are operating. However, this may be partially negated by using data loggers' or sensors networks' sleep-wake-sleep mechanism. Advantages of the microwave rain gauges are that one can make them very robust, they cannot clog, they don't have mechanical parts that wear out, and they don't have to be perfectly level. Prototype microwave rain gauges were collocated with tipping-bucket rain gauges, and data were collected for two seasons. At higher rain rates, microwave rain gauge measurements compare well with tipping-bucket measurements. At lower rain rates, the microwave rain gauges provide more detailed information than tipping buckets, which quantize measurement typically in 1 tip per 0.01 inch, or 1 tip per mm of rainfall.

Usefulness of commercially available GPS data-loggers for tracking human movement and exposure to dengue virus

PubMed Central

2009-01-01

Background Our understanding of the effects of human movement on dengue virus spread remains limited in part due to the lack of precise tools to monitor the time-dependent location of individuals. We determined the utility of a new, commercially available, GPS data-logger for long-term tracking of human movements in Iquitos, Peru. We conducted a series of evaluations focused on GPS device attributes key to reliable use and accuracy. GPS observations from two participants were later compared with semi-structured interview data to assess the usefulness of GPS technology to track individual mobility patterns. Results Positional point and line accuracy were 4.4 and 10.3 m, respectively. GPS wearing mode increased spatial point error by 6.9 m. Units were worn on a neck-strap by a carpenter and a moto-taxi driver for 14-16 days. The application of a clustering algorithm (I-cluster) to the raw GPS positional data allowed the identification of locations visited by each participant together with the frequency and duration of each visit. The carpenter moved less and spent more time in more fixed locations than the moto-taxi driver, who visited more locations for a shorter period of time. GPS and participants' interviews concordantly identified 6 common locations, whereas GPS alone identified 4 locations and participants alone identified 10 locations. Most (80%) of the locations identified by participants alone were places reported as visited for less than 30 minutes. Conclusion The present study demonstrates the feasibility of a novel, commercially available GPS data-logger for long-term tracking of humans and shows the potential of these units to quantify mobility patterns in relationship with dengue virus transmission risk in a tropical urban environment. Cost, battery life, size, programmability and ease of wear are unprecedented from previously tested units, proving the usefulness of GPS-dataloggers for linking movement of individuals and transmission risk of dengue virus and other infectious agents, particularly in resource-poor settings. PMID:19948034

A ocean bottom vector magnetometer

NASA Astrophysics Data System (ADS)

Wang, Xiaomei; Teng, Yuntian; Wang, Chen; Ma, Jiemei

2017-04-01

The new development instrument with a compact spherical coil system and Overhauser magnetometer for measuring the total strength of the magnetic field and the vectors of strength, Delta inclination - Delta declination, meanwhile we also use a triaxial fluxgate instrument of the traditional instrument for geomagnetic vector filed measurement. The advantages of this method are be calibrated by each other and get good performances with automatic operation, good stability and high resolution. Firstly, a brief description of the instrument measurement principles and the key technologies are given. The instrument used a spherical coil system with 34 coils to product the homogeneous volume inside the coils which is large enough to accommodate the sensor of Overhauser total field sensor; the rest of the footlocker-sized ocean-bottom vector magnetometer consists of equipment to run the sensors and records its data (batteries and a data logger), weight to sink it to the sea floor, a remote-controlled acoustic release and flotation to bring the instrument back to the surface. Finally, the accuracy of the instrument was tested in the Geomagnetic station, and the measurement accuracies of total strength and components were better than 0.2nT and 1nT respectively. The figure 1 shows the development instrument structure. it includes six thick glass spheres which protect the sensor, data logger and batteries from the pressures of the deep sea, meanwhile they also provide recycling positive buoyancy; To cushion the glass, the spheres then go inside yellow plastic "hardhats". The triaxial fluxgate is inside No.1 glass spheres, data logger and batteries are inside No.2 glass spheres, the new vector sensor is inside No.3 glass spheres, acoustic communication unit is inside No.4 glass spheres, No.5 and No.6 glass spheres are empty which only provide recycling positive buoyancy. The figure 2 shows the development instrument Physical photo.

High-Altitude Hydration System

NASA Technical Reports Server (NTRS)

Parazynski, Scott E.; Orndoff, Evelyne; Bue, Grant C.; Schaefbauer, Mark E.; Urban, Kase

2010-01-01

Three methods are being developed for keeping water from freezing during high-altitude climbs so that mountaineers can remain hydrated. Three strategies have been developed. At the time of this reporting two needed to be tested in the field and one was conceptual. The first method is Passive Thermal Control Using Aerogels. This involves mounting the fluid reservoir of the climber s canteen to an inner layer of clothing for better heat retention. For the field test, bottles were mounted to the inner fleece layer of clothing, and then aerogel insulation was placed on the outside of the bottle, and circumferentially around the drink straw. When climbers need to drink, they can pull up the insulated straw from underneath the down suit, take a sip, and then put it back into the relative warmth of the suit. For the field test, a data logger assessed the temperatures of the water reservoir, as well as near the tip of the drink straw. The second method is Passive Thermal Control with Copper-Shielded Drink Straw and Aerogels, also mounted to inner layers of clothing for better heat retention. Braided wire emanates from the inside of the fleece jacket layer, and continues up and around the drink straw in order to use body heat to keep the system-critical drink straw warm enough to keep water in the liquid state. For the field test, a data logger will be used to compare this with the above concept. The third, and still conceptual, method is Active Thermal Control with Microcontroller. If the above methods do not work, microcontrollers and tape heaters have been identified that could keep the drink straw warm even under extremely cold conditions. Power requirements are not yet determined because the thermal environment inside the down suit relative to the external environment has not been established. A data logger will be used to track both the external and internal temperatures of the suit on a summit day.

Flow Classification and Cave Discharge Characteristics in Unsaturated Karst Formation

NASA Astrophysics Data System (ADS)

Mariethoz, G.; Mahmud, K.; Baker, A.; Treble, P. C.

2015-12-01

In this study we utilize the spatial array of automated cave drip monitoring in two large chambers of the Golgotha Cave, SW Australia, developed in Quaternary aeolianite (dune limestone), with the aim of understanding infiltration water movement via the relationships between infiltration, stalactite morphology and groundwater recharge. Mahmud et al. (2015) used the Terrestrial LiDAR measurements to analyze stalactite morphology and to characterize possible flow locations in this cave. Here we identify the stalactites feeding the drip loggers and classify each as matrix (soda straw or icicle), fracture or combined-flow. These morphology-based classifications are compared with flow characteristics from the drip logger time series and the discharge from each stalactite is calculated. The total estimated discharge from each area is compared with infiltration estimates to better understand flow from the surface to the cave ceilings of the studied areas. The drip discharge data agrees with the morphology-based flow classification in terms of flow and geometrical characteristics of cave ceiling stalactites. No significant relationships were observed between the drip logger discharge, skewness and coefficient of variation with overburden thickness, due to the possibility of potential vadose-zone storage volume and increasing complexity of the karst architecture. However, these properties can be used to characterize different flow categories. A correlation matrix demonstrates that similar flow categories are positively correlated, implying significant influence of spatial distribution. The infiltration water comes from a larger surface area, suggesting that infiltration is being focused to the studied ceiling areas of each chamber. Most of the ceiling in the cave site is dry, suggesting the possibility of capillary effects with water moving around the cave rather than passing through it. Reference:Mahmud et al. (2015), Terrestrial Lidar Survey and Morphological Analysis to Identify Infiltration Properties in the Tamala Limestone, Western Australia, IEEE JSTARS, DOI: 10.1109/JSTARS.2015.2451088, in Press.

Usefulness of commercially available GPS data-loggers for tracking human movement and exposure to dengue virus.

PubMed

Vazquez-Prokopec, Gonzalo M; Stoddard, Steven T; Paz-Soldan, Valerie; Morrison, Amy C; Elder, John P; Kochel, Tadeusz J; Scott, Thomas W; Kitron, Uriel

2009-11-30

Our understanding of the effects of human movement on dengue virus spread remains limited in part due to the lack of precise tools to monitor the time-dependent location of individuals. We determined the utility of a new, commercially available, GPS data-logger for long-term tracking of human movements in Iquitos, Peru. We conducted a series of evaluations focused on GPS device attributes key to reliable use and accuracy. GPS observations from two participants were later compared with semi-structured interview data to assess the usefulness of GPS technology to track individual mobility patterns. Positional point and line accuracy were 4.4 and 10.3 m, respectively. GPS wearing mode increased spatial point error by 6.9 m. Units were worn on a neck-strap by a carpenter and a moto-taxi driver for 14-16 days. The application of a clustering algorithm (I-cluster) to the raw GPS positional data allowed the identification of locations visited by each participant together with the frequency and duration of each visit. The carpenter moved less and spent more time in more fixed locations than the moto-taxi driver, who visited more locations for a shorter period of time. GPS and participants' interviews concordantly identified 6 common locations, whereas GPS alone identified 4 locations and participants alone identified 10 locations. Most (80%) of the locations identified by participants alone were places reported as visited for less than 30 minutes. The present study demonstrates the feasibility of a novel, commercially available GPS data-logger for long-term tracking of humans and shows the potential of these units to quantify mobility patterns in relationship with dengue virus transmission risk in a tropical urban environment. Cost, battery life, size, programmability and ease of wear are unprecedented from previously tested units, proving the usefulness of GPS-dataloggers for linking movement of individuals and transmission risk of dengue virus and other infectious agents, particularly in resource-poor settings.

A New Standard Installation Method of the Offline Seismic Observation Station in Heavy Snowfall Area of Tohoku Region

NASA Astrophysics Data System (ADS)

Hirahara, S.; Nakayama, T.; Hori, S.; Sato, T.; Chiba, Y.; Okada, T.; Matsuzawa, T.

2015-12-01

Soon after the 2011 Tohoku earthquake, seismic activity of Tohoku region, NE Japan is induced in the inland area of Akita prefecture and the border area between Fukushima and Yamagata prefectures. We plan to install a total of 80 offline seismic observation stations in these areas for studying the effect of megathrust earthquake on the activities of inland earthquakes. In our project, maintenance will be held twice-a-year for 4 years from 2015 by using 2.0Hz short-period 3-component seismometer, KVS-300 and ultra-low-power data logger, EDR-X7000 (DC12V 0.08W power supply). We installed seismometer on the rock surface or the slope of the natural ground at the possible sites confirmed with low noise level to obtain distinct seismic waveform data. We report an improvement in installation method of the offline seismic observation station in the heavy snowfall area of Tohoku region based on the retrieved data. In the conventional method, seismometer was installed in the hand-dug hole of a slope in case it is not waterproof. Data logger and battery were installed in the box container on the ground surface, and then, GPS antenna was installed on the pole fixed by stepladder. There are risks of the inclination of seismometer and the damage of equipment in heavy snowfall area. In the new method, seismometer is installed in the robust concrete box on the buried basement consists of precast concrete mass to keep its horizontality. Data logger, battery, and GPS antenna are installed on a high place by using a single pole with anchor bolt and a pole mount cabinet to enhance their safety. As a result, total costs of installation are kept down because most of the equipment is reusable. Furthermore, an environmental burden of waste products is reduced.

Towards a more practical attention bias test to assess affective state in sheep

PubMed Central

Doyle, Rebecca E.; Colditz, Ian G.; Belson, Sue; Cronin, Greg M.; Lee, Caroline

2018-01-01

Tests for attention bias potentially offer more rapid assessment of affective state in animals than existing cognitive methods. An attention bias test has previously been developed for sheep and validated as a measure of anxious states. The 3 minute test assessed behavioural responses of sheep in an enclosed arena after brief exposure to the threat of a dog. Experiment 1 of the current study aimed to refine the previously developed method, removing the need for a habituation period and shortening the test duration. Sheep were given either an anxiolytic drug, an anxiogenic drug or a control treatment prior to testing to induce contrasting affective states. Differences in behaviour were found between the treatment groups within the first 45s of the test, indicating the original test duration could be shortened from 180 s. During testing, 36 of 40 animals in the control and anxiolytic groups ate the novel feed offered in the test, indicating it is not necessary to habituate animals to a feed container. Experiment 2 aimed to confirm the responses measured in the test were primarily towards the dog rather than other aspects of the test environment. Sheep exposed to an empty window at the beginning of the test behaved differently to those which were exposed to a dog, indicating sheep behaviour in the test is at least partially a response to the dog. A third group of sheep were also tested with the dog immediately after having small data loggers attached to their necks. Behaviour of these sheep did not differ from the sheep tested without loggers, indicating data logger attachment did not impact their behaviour in the test. In both experiments, treatments did not appear to modify activity (zones crossed), which we propose indicates the test was primarily detecting valence of the affective state rather than arousal. PMID:29293636

Vegetation of the McCormick Research Natural Area

Treesearch

Frederick T. Metzger

1973-01-01

The 17,000 acre McCormick tract, nestled in the Michigamme Highlands of Michigan`s Upper Peninsula, has rested quietly since the white pine loggers broke camp 70 years ago. The few occasional visitors have been hikers, fishermen, hunters, and trappers, who left little imprint on the land. The roads that eventually dissected the surrounding area never penetrated here....

Open source data logger for low-cost environmental monitoring

PubMed Central

2014-01-01

Abstract The increasing transformation of biodiversity into a data-intensive science has seen numerous independent systems linked and aggregated into the current landscape of biodiversity informatics. This paper outlines how we can move forward with this programme, incorporating real time environmental monitoring into our methodology using low-power and low-cost computing platforms. PMID:24855446

Tracking rainfall impulses through progressively larger drainage basins in steep forested terrain

Treesearch

R. R. Ziemer; R. M. Rice

1990-01-01

Abstract - The precision of timing devices in modern electronic data loggers makes it possible to study the routing of water through small drainage basins having rapid responses to hydrologic impulses. Storm hyetographs were measured using digital tipping bucket rain gauges and their routing was observed at headwater piezometers located mid-slope, above a swale, and...

Project SUN (Students Understanding Nature)

NASA Technical Reports Server (NTRS)

Curley, T.; Yanow, G.

1995-01-01

Project SUN is part of NASA's 'Mission to Planet Earth' education outreach effort. It is based on development of low cost, scientifi- cally accurate instrumentation and computer interfacing, coupled with Apple II computers as dedicated data loggers. The project is com- prised of: instruments, interfacing, software, curriculum, a detailed operating manual, and a system of training at the school sites.

The Relationship between Wheelchair Mobility Patterns and Community Participation among Individuals with Spinal Cord Injury

ERIC Educational Resources Information Center

Cooper, Rory A.; Ferretti, Eliana; Oyster, Michelle; Kelleher, Annmarie; Cooper, Rosemarie

2011-01-01

Participation is considered the most meaningful outcome of rehabilitation. The purpose of this study was to investigate whether there were correlations between wheelchair activity recorded with a data logger and community participation as measured by the Participation Survey/Mobility. Data from 16 participants were included in this study. Data…

Nanosized TiO[subscript 2] for Photocatalytic Water Splitting Studied by Oxygen Sensor and Data Logger

ERIC Educational Resources Information Center

Zhang, Ruinan; Liu, Song; Yuan, Hongyan; Xiao, Dan; Choi, Martin M. F.

2012-01-01

Photocatalytic water splitting by semiconductor photocatalysts has attracted considerable attention in the past few decades. In this experiment, nanosized titanium dioxide (nano-TiO[subscript 2]) particles are used to photocatalytically split water, which is then monitored by an oxygen sensor. Sacrificial reagents such as organics (EDTA) and metal…

Subsurface pipeflow dynamics of north-coastal California swale systems

Treesearch

Robert R. Ziemer; Jeffrey S. Albright

1987-01-01

Abstract - Pipeflow dynamics are being studied at Caspar Creek Experimental Watershed in north-coastal California near Ft. Bragg. Pipes have been observed at depths to 2 m within trenched swales and at the heads of gullied channels in small (0.8 to 2 ha) headwater drainages. Digital data loggers connected to pressure transducers monitor discharge using calibrated...

Comparison of Field Methods and Models to Estimate Mean Crown Diameter

Treesearch

William A. Bechtold; Manfred E. Mielke; Stanley J. Zarnoch

2002-01-01

The direct measurement of crown diameters with logger's tapes adds significantly to the cost of extensive forest inventories. We undertook a study of 100 trees to compare this measurement method to four alternatives-two field instruments, ocular estimates, and regression models. Using the taping method as the standard of comparison, accuracy of the tested...

Interdisciplinary research can provide information for the harvesting challenges of the 1990's

Treesearch

Chris B. LeDoux; John E. Baumgras

1991-01-01

Management of our complex forest ecosystems in the economic and political climate of the 1990's is a challenge for planners, managers, and loggers. A multifunctional approach - using the research results of other disciplines and considering all forest uses and values - can improve the effectiveness of forest operations research. Since harvesting cost and revenue...

Information and Communication Technologies (ICT) in Biology Teaching in Slovenian Secondary Schools

ERIC Educational Resources Information Center

Sorgo, Andrej; Verckovnik, Tatjana; Kocijancic, Slavko

2010-01-01

About two-thirds of Slovene secondary schools received computers equipped with data-loggers and sensors to be used in teaching Physics, Chemistry and Biology. Later it was recognized that only a couple of Biology teachers were using the donated equipment in their classrooms or laboratories. The questionnaire, intended to investigate the situation,…

Measuring Model Rocket Engine Thrust Curves

ERIC Educational Resources Information Center

Penn, Kim; Slaton, William V.

2010-01-01

This paper describes a method and setup to quickly and easily measure a model rocket engine's thrust curve using a computer data logger and force probe. Horst describes using Vernier's LabPro and force probe to measure the rocket engine's thrust curve; however, the method of attaching the rocket to the force probe is not discussed. We show how a…

In-situ characterization of wildland fire behavior

Treesearch

Bret Butler; D. Jimenez; J. Forthofer; Paul Sopko; K. Shannon; Jim Reardon

2010-01-01

A system consisting of two enclosures has been developed to characterize wildand fire behavior: The first enclosure is a sensor/data logger combination that measures and records convective/radiant energy released by the fire. The second is a digital video camera housed in a fire proof enclosure that records visual images of fire behavior. Together this system provides...

Techniques for the wheeled-skidder operator

Treesearch

Robert L. Hartman; Harry G. Gibson; Harry G. Gibson

1970-01-01

How much production a logger gets from a logging job may depend heavily on his skidder operators. They are key men on any logging job. This is one conclusion that forestry engineers at the USDA Forest Service's Forestry Sciences Laboratory at Morgantown, West Virginia, came to after studying the operation of u-heeled skidders in mountainous Appalachian terrain....

Time Series Analysis of Water Level and Temperature in the St Louis River Estuary

EPA Science Inventory

Pressure and temperature loggers were deployed at 9 sites in the St Louis River estuary between 6/23 10/31 2011. A reference sensor was place on the shore to correct pressure data. Sensors were paced at <1 m depth in Allouez Bay, Superior Bay, near Hearding Island, WLSSD Bay, th...

Lake Biel Holocene sediment record before and after the Aare river deviation (1878 AD)

NASA Astrophysics Data System (ADS)

Jeannet, Alice; Corella, Juan Pablo; Kremer, Katrina; Girardclos, Stéphanie

2014-05-01

Lake sediments are excellent archives of environmental and climate changes as well as human impact on lake- and river-systems. Lake Biel is a medium-sized peri-alpine lake in Switzerland, with a maximum depth of 74 m, and lies at an altitude of 429 m a.s.l. Lake Biel, which formed during the Pleistocene by glacial erosion, is part of the Aare river system. Our study focuses on the south-west part of the lake basin where the lake sedimentation was originally (i.e. naturally) mainly controlled by autochthonous sedimentation. This area is currently under a strong influence of water and sediment input from this river catchment since the Aare river deviation through the Hagneck canal in 1878. A 10.05 m long composite sediment sequence, cored from a 52 m water depth in September 2011, was built from two long cores retrieved with the ETH Zurich/Eawag Uwitec system. A radiocarbon age model indicates that the retrieved sedimentary sequence spans the last 7500 years. The upper sediments were correlated to previous short core radionuclide stratigraphy for the 1.5 m upper part (Thevenon et al., 2013). Magnetic susceptibility and density were measured by Geotek MultiSensor Core Logger at 0.5 cm resolution. Granulometry was measured with a CILAS grain sizer every 10 cm, and X-ray fluorescence (XRF) was carried out using an Avaatech core scanner at 1-cm resolution. This technique provides semi-quantitative information of the sediment elemental composition and shows how runoff and river input (Ti, Al, Si) or redox conditions (Fe/Mn) vary through time. Lake Biel sediment record suggests marked environmental changes with runoff decrease linked to climate and vegetation change during Atlantic chronobiozone, as well as a complex climate-human impact during the 'La Tène' and Roman cultural times. The most prominent recorded feature is the 10-times increase of sediment rate that occurred after the Aare river deviation through the Hagneck canal into Lake Biel in 1878. This artificial new river input is also linked to a massive and sudden Ti increase, and inversely abrupt Ca decrease in XRF data. This record reveals the significant alteration in the sediment dynamics, and the lake oxygenation changes that the lake experienced when it shifted from a relatively closed basin to a river and delta-influenced basin. Thank you to Flavio S. Anselmetti, Christine Guido and Frédéric Arlaud for help coring on the field and Stefanie Wirth for help at Limnogeology Laboratory. This study, undertaken as a Master thesis, was financed by the Swiss National Foundation projects 121666 and 146889. Reference Thevenon F. et al. 2013. Human impact on the transport of terrigenous and anthropogenic elements to peri-alpine lakes (Switzerland) over the last decades. Aquatic Sciences 75: 413-424.

Data Modeling, Development, Installation and Operation of the ACEX Offshore Drilling Information System for the Mission Specific Platform Expedition to the Lomonosov Ridge, Arctic Ocean.

NASA Astrophysics Data System (ADS)

Conze, R.; Krysiak, F.; Wallrabe-Adams, H.; Graham, C. C.

2004-12-01

During August/September 2004, the Arctic Coring Expedition (ACEX) was used to trial a new Offshore Drilling Information System (OffshoreDIS). ACEX was the first Mission Specific Platform (MSP) expedition of the Integrated Ocean Drilling Programme (IODP), funded by the European Consortium for Ocean Research Drilling (ECORD). The British Geological Survey in conjunction with the University of Bremen and the European Petrophysics Consortium were the ECORD Science Operator (ESO) for ACEX. IODP MSP expeditions have very similar data management requirements and operate in similar working environments to the lake drilling projects conducted by the International Continental Scientific Drilling Program (ICDP), for example, the GLAD800, which has very restricted space on board and operates in difficult conditions. Both organizations require data capture and management systems that are mobile, flexible and that can be deployed quickly on small- to medium-sized drilling platforms for the initial gathering of data, and that can also be deployed onshore in laboratories where the bulk of the scientific work is conducted. ESO, therefore, decided that an adapted version of the existing Drilling Information System (DIS) used by ICDP projects would satisfy its requirements. Based on the existing DIS, an OffshoreDIS has been developed for MSP expeditions. The underlying data model is compatible with IODP(JANUS), the Bremen Core Repository, WDC-MARE/PANGAEA and the LacCore in Minneapolis. According to the specific expedition platform configuration and on-board workflow requirements for the Arctic, this data model, data pumps and user interfaces were adapted for the ACEX-OffshoreDIS. On the drill ship Vidar Viking the cores were catalogued and petrophysically logged using a GeoTek Multi-Sensor Core Logger System, while further initial measurements, lithological descriptions and biostratigraphic investigations were undertaken on the Oden, which provided laboratory facilities for the expedition. Onboard samples were registered in a corresponding sample archive on both vessels. The ACEX-OffshoreDIS used a local area network covering the two ships of the three icebreaker fleet by wireless LAN between the ships and partly wired LAN on the ships. A DIS-server was installed on each ship. These were synchronized by database replication and linked to a total of 10 client systems and label printers across both ships. The ACEX-OffshoreDIS will also be used for the scientific measurement and analysis phase of the expedition during the post-field operations `shore-party' in November 2004 at the Bremen Core Repository (BCR). The data management system employed in the Arctic will be reconfigured and deployed at the BCR. In addition, an eXtended DIS (XDIS) Web interface will be available. This will allow controlled sample distribution (core curation, sub-sampling) as well as sharing of data (registration, upload and download) with other laboratories which will be undertaking additional sampling and analyses. The OffshoreDIS data management system will be of long-term benefit to both IODP and ICDP, being deployed in forthcoming MSP offshore projects, ICDP lake projects and joint IODP-ICDP projects such as the New Jersey Coastal Plain Drilling Project.

Servicios Publicos/Negocios Agricolas. Libro del Profesor (Public Services/Agribusiness. Teacher's Guide). B4. CHOICE (Challenging Options in Career Education).

ERIC Educational Resources Information Center

Mid-Hudson Migrant Education Center, New Paltz, NY.

Written in Spanish, this guide comprises the third grade unit of a career education curriculum developed for migrant students. The guide covers 11 jobs in the public services and agribusiness fields--nursing aide, sanitation worker, mail carrier, librarian, fire fighter, police officer, gardener, farmer, logger, miner, and forest ranger. Student…

Spatial and temporal variability of canopy microclimate in a Sierra Nevada riparian forest

Treesearch

T. Rambo; M. North

2008-01-01

Past riparian microclimate studies have measured changes horizontally from streams, but not vertically through the forest canopy. We recorded temperature and relative humidity for a year along a two-dimensional grid of 24 data-loggers arrayed up to 40 m height in four trees 2 - 30 m slope distance from a perennial second order stream in...

Shift level analysis of cable yarder availability, utilization, and productive time

Treesearch

James R. Sherar; Chris B. LeDoux

1989-01-01

Decision makers, loggers, managers, and planners need to understand and have methods for estimating utilization and productive time of cable logging systems. In making an accurate prediction of how much area and volume a machine will log per unit time and the associated cable yarding costs, a reliable estimate of the availability, utilization, and productive time of...

Logging methods and peeling of Aspen

Treesearch

T. Schantz-Hansen

1948-01-01

The logging of forest products is influenced by many factors, including the size of the trees, density of the stand, the soundness of the trees, size of the area logged, topography and soil, weather conditions, the degree of utilization, the skill of the logger and the equipment used, the distance from market, etc. Each of these factors influences not only the method...

An analysis of production and costs in high-lead yarding.

Treesearch

Magnus E. Tennas; Robert H. Ruth; Carl M. Berntsen

1955-01-01

In recent years loggers and timber owners have needed better information for estimating logging costs in the Douglas-fir region. Brandstrom's comprehensive study, published in 1933 (1), has long been used as a guide in making cost estimates. But the use of new equipment and techniques and an overall increase in logging costs have made it increasingly difficult to...

Economic comparisons of haul road construction versus forwarding versus longer skid distances

Treesearch

Michael D. Erickson; Curt C. Hassler; Chris B. LeDoux

1992-01-01

There currently exists no set of basic guidelines for Appalachian loggers to use in the decision making process for selecting the best way to harvest a tract of timber. Specifically, guidelines are needed for deciding between the alternatives of constructing truck haul roads to access an area or other alternatives such as skidding or forwarding timber longer distances...

Evaluating the potential of structure from motion technology for forest inventory data collection

Treesearch

Demetrios Gatziolis

2015-01-01

Since the inception of its annual plot design, the Forest Inventory and Analysis (FIA) Program of the USDA Forest Service has integrated into its data collection operations elements of digital technology, including data loggers, laser distance recorders and clinometers, and GPS devices. Data collected with the assistance of this technology during a typical plot visit...

Zero-phase FIR filters: Blessing or curse?

NASA Astrophysics Data System (ADS)

Scherbaum, Frank

These are exciting times for observational seismology. State-of-the-art broadband seismometers now easily cover a frequency band of more than one hundred seconds to several tens of Hertz in a single sensor. Commonly available data loggers provide a dynamic range exceeding 120 dB. Ground motion amplitudes differing by more than 6 orders of magnitude can be simultaneously recorded without distortion.

Choosing methods and equipment for logging

Treesearch

Fred C. Simmons

1948-01-01

A logging job is one of the most difficult types of business to manage efficiently. In practically everything the logger does he is compelled to make a choice between several methods of operation and types of equipment. The conditions under which he works are constantly changing, particularly when he is forced to move fairly often from one timber tract to another. But...

Monitoring the Temperature of Tree Seedlings With the Thermochron iButton Data Logger

Treesearch

David S. Gasvoda; Richard W. Tinus; Karen E. Burr; Andy Trent

2002-01-01

Tracking the temperature of tree seedlings from the nursery to the planting site can be the key to evaluating possible physiological causes of morality after seedlings are planted. Seedlings enter and leave nursery storage with easily documented levels of cold hardiness, root growth potential, and general stress tolerance (Burr 1990: Ritchie and Tanaka 1990). The...

A Practical Example Aiding Understanding Momentum in 1D: The Water Gun Experiment

ERIC Educational Resources Information Center

MacLeod, Katarin

2007-01-01

The law of conservation of momentum is one that students often have difficulties understanding. This experiment allows students to use childhood toys to examine and calculate the muzzle velocity of their favourite water gun by using an air track, a spark timer or data logger and the law of conservation of momentum in a one-dimensional case, a…

Urban-Small Building Complex Environment: W07US Stability Analysis and Inter-Study Comparison, Volume AS-2

DTIC Science & Technology

2008-05-01

pyranometer (Kipp/Zonen-CM3). A Campbell CR23X micro-logger recorded the standard meteorological parameters in 1-min averages. 3 Figure 2... Pyranometer Kipp/Zonen CM3 Watts/meter2 Net solar radiation Net radiometer Kipp/Zonen NR-LITE Watts/meter2 Table 4. W07US tower configuration. Tower Number

Production analysis of two tree-bucking and product-sorting methods for hardwoods

Treesearch

John E. Baumgras; Chris B. LeDoux

1989-01-01

This paper documents the results of a study to determine the cost and productivity of two tree-bucking and product-sorting methods used by West Virginia loggers harvesting three to four types of roundwood products. The methods include manual chainsaw bucking and bucking with a hydraulically powered chainsaw slasher. Results show that chain saw bucking of trees...

Having Fun with a Cordless Mouse

ERIC Educational Resources Information Center

Nunn, John

2016-01-01

A cordless mouse with an added reed switch is used as a wireless data logger to record every time the wheel of a trolley completes a revolution. The limitations of the system in terms of maximum clicking rate and spatial resolution are considered and data obtained from the descent of a trolley down a ramp at various different angles is analysed in…

Demonstration of Hydrostatic Paradox with Plastic Bottles and LabQuest Vernier

ERIC Educational Resources Information Center

Kodejška, Cenek

2018-01-01

This work focuses on the experimental demonstration of the hydrostatic paradox using simple tools in the form of plastic bottles and plastic syringes with a thread. For the evaluation of the results obtained the data logger Lab Quest Vernier was used. The construction of the device is presented in the first part of this paper. The second part…

Heart rot of Virginia pine in Maryland

Treesearch

Richard H. Fenton; Frederick H. Berry

1956-01-01

Loggers and sawmill men have been wary of purchasing Virginia pine sawtimber. They point out that a heart rot, locally called "red heart, may spell the difference between profit and loss on a logging job. It is difficult to detect this rot in standing Virginia pine. It is even harder to estimate the volume loss. And total losses can be determined only after...

Operating manual for the RRL 8 channel data logger

NASA Technical Reports Server (NTRS)

Paluch, E. J.; Shelton, J. D.; Gardner, C. S.

1979-01-01

A data collection device which takes measurements from external sensors at user specified time intervals is described. Three sensor ports are dedicated to temperature, air pressure, and dew point. Five general purpose sensor ports are provided. The user specifies when the measurements are recorded as well as when the information is read or stored in a minicomputer or a paper tape.

First direct evidence of long-distance seasonal movements and hibernation in a migratory bat

USGS Publications Warehouse

Weller, Theodore J.; Castle, Kevin T.; Liechti, Felix; Hein, Cris D.; Schirmacher, Michael R.; Cryan, Paul M.

2016-01-01

Understanding of migration in small bats has been constrained by limitations of techniques that were labor-intensive, provided coarse levels of resolution, or were limited to population-level inferences. Knowledge of movements and behaviors of individual bats have been unknowable because of limitations in size of tracking devices and methods to attach them for long periods. We used sutures to attach miniature global positioning system (GPS) tags and data loggers that recorded light levels, activity, and temperature to male hoary bats (Lasiurus cinereus). Results from recovered GPS tags illustrated profound differences among movement patterns by individuals, including one that completed a >1000 km round-trip journey during October 2014. Data loggers allowed us to record sub-hourly patterns of activity and torpor use, in one case over a period of 224 days that spanned an entire winter. In this latter bat, we documented 5 torpor bouts that lasted ≥16 days and a flightless period that lasted 40 nights. These first uses of miniature tags on small bats allowed us to discover that male hoary bats can make multi-directional movements during the migratory season and sometimes hibernate for an entire winter.

Traditional chinese medicine improves activities of daily living in Parkinson's disease.

PubMed

Pan, Weidong; Kwak, Shin; Liu, Yun; Sun, Yan; Fang, Zhenglong; Qin, Baofeng; Yamamoto, Yoshiharu

2011-01-01

We evaluated the effects of a traditional Chinese medicine (TCM), named Zeng-xiao An-shen Zhi-chan 2 (ZAZ2), on patients with Parkinson's disease (PD). Among 115 patients with idiopathic PD enrolled (mean age, 64.7 ± 10.2 years old), 110 patients (M = 65, F = 45; mean age, 64.9 ± 10.7 years old) completed the study. Patients took either ZAZ2 (n = 59) or placebo granule (n = 56) in a blind manner for 13 weeks while maintaining other anti-Parkinson medications unchanged. All participants wore a motion logger, and we analyzed the power-law temporal autocorrelation of the motion logger records taken on 3 occasions (before, one week, and 13 weeks after the drug administration). Drug efficacy was evaluated with the conventional Unified Parkinson Disease Rating Scale (UPDRS), as well as the power-law exponent α, which corresponds to the level of physical activity of the patients. ZAZ2 but not placebo granule improved the awake-sleep rhythm, the UPDRS Part II, Part II + III, and Part IV scores, and the α values. The results indicate that ZAZ2 improved activities of daily living (ADL) of parkinsonism and, thus, is a potentially suitable drug for long-term use.

Impact detection and analysis/health monitoring system for composites

NASA Astrophysics Data System (ADS)

Child, James E.; Kumar, Amrita; Beard, Shawn; Qing, Peter; Paslay, Don G.

2006-05-01

This manuscript includes information from test evaluations and development of a smart event detection system for use in monitoring composite rocket motor cases for damaging impacts. The primary purpose of the system as a sentry for case impact event logging is accomplished through; implementation of a passive network of miniaturized piezoelectric sensors, logger with pre-determined force threshold levels, and analysis software. Empirical approaches to structural characterizations and network calibrations along with implementation techniques were successfully evaluated, testing was performed on both unloaded (less propellants) as well as loaded rocket motors with the cylindrical areas being of primary focus. The logged test impact data with known physical network parameters provided for impact location as well as force determination, typically within 3 inches of actual impact location using a 4 foot network grid and force accuracy within 25%of an actual impact force. The simplistic empirical characterization approach along with the robust / flexible sensor grids and battery operated portable logger show promise of a system that can increase confidence in composite integrity for both new assets progressing through manufacturing processes as well as existing assets that may be in storage or transportation.

Application of low cost technology for the management of irrgation in organic orchads

NASA Astrophysics Data System (ADS)

Horcajo, Daniel; Patrícia Prazeres Marques, Karina; Rodríguez Sinobas, Leonor

2014-05-01

Throughout history, humans have cyclically return to their old traditions such as the organic orchards. Nowadays, these have been integrated into the modern cities and could supply fresh vegetables to the daily food improving human health. Organic orchards grow crops without pesticides and artificial fertilizers thus, they are respectful with the environment and guarantee the food's safety . In modern society, the application of new technology is a must, in this case to obtain an efficient irrigation. In order to monitor a proper irrigation and save water and energy, soil water content probes are used to measure soil water content. Among them, capacitive probes ,monitored with a specific data logger, are typically used. Most of them, specially the data loggers, are expensive and in many cases are not used. In this work, we have applied the open hardware Arduino to build and program a low cost datalogger for the programming of irrigation in an experimental organic orchard. Results showed that the application of such as low cost technology, which is easily available in the market and easy to understand, everyone can built and program its own device helping in managing water resources in organic orchards .

Measuring Device for Air Speed in Macroporous Media and Its Application Inside Apple Storage Bins.

PubMed

Geyer, Martin; Praeger, Ulrike; Truppel, Ingo; Scaar, Holger; Neuwald, Daniel A; Jedermann, Reiner; Gottschalk, Klaus

2018-02-13

In cold storage facilities of fruit and vegetables, airflow is necessary for heat removal. The design of storage facilities influences the air speed in the surrounding of the product. Therefore, knowledge about airflow next to the product is important to plan the layout of cold stores adapted to the requirements of the products. A new sensing device (ASL, Air speed logger) is developed for omnidirectional measurement of air speed between fruit or vegetables inside storage bins or in bulk. It consists of four interconnected plastic spheres with 80 mm diameter each, adapted to the size of apple fruit. In the free space between the spheres, silicon diodes are fixed for the airflow measurement based on a calorimetric principle. Battery and data logger are mounted inside the spheres. The device is calibrated in a wind tunnel in a measuring range of 0-1.3 m/s. Air speed measurements in fruit bulks on laboratory scale and in an industrial fruit store show air speeds in gaps between fruit with high stability at different airflow levels. Several devices can be placed between stored products for determination of the air speed distribution inside bulks or bin stacks in a storage room.

Application of borehole geophysics to water-resources investigations

USGS Publications Warehouse

Keys, W.S.; MacCary, L.M.

1971-01-01

This manual is intended to be a guide for hydrologists using borehole geophysics in ground-water studies. The emphasis is on the application and interpretation of geophysical well logs, and not on the operation of a logger. It describes in detail those logging techniques that have been utilized within the Water Resources Division of the U.S. Geological Survey, and those used in petroleum investigations that have potential application to hydrologic problems. Most of the logs described can be made by commercial logging service companies, and many can be made with small water-well loggers. The general principles of each technique and the rules of log interpretation are the same, regardless of differences in instrumentation. Geophysical well logs can be interpreted to determine the lithology, geometry, resistivity, formation factor, bulk density, porosity, permeability, moisture content, and specific yield of water-bearing rocks, and to define the source, movement, and chemical and physical characteristics of ground water. Numerous examples of logs are used to illustrate applications and interpretation in various ground-water environments. The interrelations between various types of logs are emphasized, and the following aspects are described for each of the important logging techniques: Principles and applications, instrumentation, calibration and standardization, radius of investigation, and extraneous effects.

Turning a $10 Computer into a Powerful DIY Data Logger

NASA Astrophysics Data System (ADS)

Schilperoort, B.

2017-12-01

Due the rapid advance of consumer electronics, much more powerful and cheaper options are available for DIY projects. The $10 `Raspberry Pi Zero W' computer, with abilities like WiFi, Bluetooth, HDMI video output, and a large cheap memory, can be used for data logging purposes. The computer has a range of input and output pins on the board, with which virtually every type of digital sensor communication is possible. With an extra component, analog measurements can also be made. An extra option is the addition of a camera, which can be connected straight to the board. However, due to the relatively high power consumption (0.5 - 0.7 Watt), the `Zero W' is not optimal for off-the-grid locations. For ease of use, the collected data can be downloaded over a local WiFi network using your smartphone or a laptop. No extra software or skills are needed, it is as simple as visiting a webpage and pressing download, making data collection a quick and easy task. With simple step by step instructions you can set up your own data logger, to collect data from sensors ranging from simple temperature and water level measurements, to sonic anemometers.

The Use of Acceleration to Code for Animal Behaviours; A Case Study in Free-Ranging Eurasian Beavers Castor fiber

PubMed Central

Graf, Patricia M.; Wilson, Rory P.; Qasem, Lama; Hackländer, Klaus; Rosell, Frank

2015-01-01

Recent technological innovations have led to the development of miniature, accelerometer-containing electronic loggers which can be attached to free-living animals. Accelerometers provide information on both body posture and dynamism which can be used as descriptors to define behaviour. We deployed tri-axial accelerometer loggers on 12 free-ranging Eurasian beavers Castor fiber in the county of Telemark, Norway, and on four captive beavers (two Eurasian beavers and two North American beavers C. canadensis) to corroborate acceleration signals with observed behaviours. By using random forests for classifying behavioural patterns of beavers from accelerometry data, we were able to distinguish seven behaviours; standing, walking, swimming, feeding, grooming, diving and sleeping. We show how to apply the use of acceleration to determine behaviour, and emphasise the ease with which this non-invasive method can be implemented. Furthermore, we discuss the strengths and weaknesses of this, and the implementation of accelerometry on animals, illustrating limitations, suggestions and solutions. Ultimately, this approach may also serve as a template facilitating studies on other animals with similar locomotor modes and deliver new insights into hitherto unknown aspects of behavioural ecology. PMID:26317623

pFlogger: The Parallel Fortran Logging Utility

NASA Technical Reports Server (NTRS)

Clune, Tom; Cruz, Carlos A.

2017-01-01

In the context of high performance computing (HPC), software investments in support of text-based diagnostics, which monitor a running application, are typically limited compared to those for other types of IO. Examples of such diagnostics include reiteration of configuration parameters, progress indicators, simple metrics (e.g., mass conservation, convergence of solvers, etc.), and timers. To some degree, this difference in priority is justifiable as other forms of output are the primary products of a scientific model and, due to their large data volume, much more likely to be a significant performance concern. In contrast, text-based diagnostic content is generally not shared beyond the individual or group running an application and is most often used to troubleshoot when something goes wrong. We suggest that a more systematic approach enabled by a logging facility (or 'logger)' similar to those routinely used by many communities would provide significant value to complex scientific applications. In the context of high-performance computing, an appropriate logger would provide specialized support for distributed and shared-memory parallelism and have low performance overhead. In this paper, we present our prototype implementation of pFlogger - a parallel Fortran-based logging framework, and assess its suitability for use in a complex scientific application.

New hydrologic instrumentation in the U.S. Geological Survey

USGS Publications Warehouse

Latkovich, V.J.; Shope, W.G.; ,

1991-01-01

New water-level sensing and recording instrumentation is being used by the U.S. Geological Survey for monitoring water levels, stream velocities, and water-quality characteristics. Several of these instruments are briefly described. The Basic Data Recorder (BDR) is an electronic data logger, that interfaces to sensor systems through a serial-digital interface standard (SDI-12), which was proposed by the data-logger industry; the Incremental Shaft Encoder is an intelligent water-level sensor, which interfaces to the BDR through the SDI-12; the Pressure Sensor is an intelligent, nonsubmersible pressure sensor, which interfaces to the BDR through the SDI-12 and monitors water levels from 0 to 50 feet; the Ultrasonic Velocity Meter is an intelligent, water-velocity sensor, which interfaces to the BDR through the SDI-12 and measures the velocity across a stream up to 500 feet in width; the Collapsible Hand Sampler can be collapsed for insertion through holes in the ice and opened under the ice to collect a water sample; the Lighweight Ice Auger, weighing only 32 pounds, can auger 6- and 8-inch holes through approximately 3.5 feet of ice; and the Ice Chisel has a specially hardened steel blade and 6-foot long, hickory D-handle.

Processes of seasonal layer formation in varved Lake Czechowskie (N Poland): Linking monitoring and sediment core data

NASA Astrophysics Data System (ADS)

Ott, Florian; Brykała, Dariusz; Gierszewski, Piotr; Schwab, Markus; Brademann, Brian; Dräger, Nadine; Kienel, Ulrike; Pinkerneil, Sylvia; Plessen, Birgit; Słowiński, Michał; Błaszkiewicz, Mirosław; Brauer, Achim

2017-04-01

The interpretation of environmental and climate records, such as lake sediments, rely on the profound understanding of the proxy sensitivity towards past changes. Monitoring of lake sedimentation, limnological, hydrological and climate parameters are natural experiments combining measurements and observations. In this study, we present monitoring data from Lake Czechowskie (N Poland) for the period 2013-2016. Lake Czechowskie has a surface area of 73 ha and a maximum water depth of 32 m. Sediment has been trapped in a 4-cylinder and an automatic sequential trap installed at 12 and 30 m water depths close to the deepest part of the lake, respectively. Sampling intervals range from 15 (sequential) to 30 days (4 cylinder) days. The sediment has been analyzed for total sediment flux, calcium carbonate and organic matter contents. Continuous water temperature measurements (30 min. intervals) are based on 17 data loggers covering the entire water column (1 m steps from 0-12 m; 5 m steps from 12-32 m). Limnological measurements (e.g. electrical conductivity, dissolved oxygen and pH) have been carried out manually on a monthly routine. Air temperature, precipitation, wind speed and direction are available for the same period from a meteorological station installed at the shore of Lake Czechowskie. Our dataset exhibit seasonal deposition starting with diatom blooms and calcite precipitation in spring after lake stratification. A second deposition peak occurs at the onset of lake mixing in late autumn and winter. This is caused by an initial deposition of planktonic diatoms (mainly Fragilaria spp.) indicating lake productivity, followed by an increase in larger calcite patches (>30 µm) and periphyitic diatoms (mainly Navicula spp.) representing resuspension of littoral sediments. We paired sediment trap data with micro-facies analyses from a sediment core obtained in autumn 2016 covering the same time interval. This study is a contribution to the Virtual Institute of Integrated Climate and Landscape Evolution Analyses - ICLEA - of the Helmholtz Association, grant number VH-VI-415.

Recent scientific and operational achievements of D/V Chikyu

NASA Astrophysics Data System (ADS)

Taira, Asahiko; Toczko, Sean; Eguchi, Nobu; Kuramoto, Shin'ichi; Kubo, Yusuke; Azuma, Wataru

2014-12-01

The D/V Chikyu, a scientific drilling vessel, is equipped with industry-standard riser capabilities. Riser drilling technology enables remarkable drilling and downhole logging capabilities and provides unprecedented hole-stability, enabling the shipboard team to retrieve high-quality wire-line logging data as well as well-preserved core samples. The 11 March 2011 Tohoku Oki mega-earthquake and tsunami cost over 18,000 casualties in NE Japan. Chikyu, docked in the Port of Hachinohe, was damaged by the tsunami. By April 2012, the ship was back in operation; drilling the toe of the Japan Trench fault zone where topographic surveys suggested there was up to 50 m eastward motion, the largest earthquake rupture ever recorded. During Integrated Ocean Drilling Program (IODP) Expeditions 343 and 343 T, Chikyu drilled 850 m below sea floor (mbsf) in 6,900+ m water depth and recovered core samples of a highly brecciated shear zone composed of pelagic claystone. A subseafloor observatory looking for temperature signatures caused by the fault friction during the earthquake, was installed and later successfully recovered. The recovered temperature loggers recorded data from which the level of friction during the mega-earthquake slip could be determined. Following Exp. 343, Chikyu began IODP Exp. 337, a riser drilling expedition into the Shimokita coal beds off Hachinohe, to study the deep subsurface biosphere in sedimentary units including Paleogene-Neogene coal beds. New records in scientific ocean drilling were achieved in deepest penetration (drilling reached 2,466 mbsf) and sample recovery. Currently Chikyu is conducting deep riser drilling at the Nankai Trough in the final stage of the NanTroSEIZE campaign. During the years 2011 to 2013, including drilling in the Okinawa Hydrothermal System, Chikyu's operational and scientific achievements have demonstrated that the ship's capabilities are vital for opening new frontiers in earth and biological sciences.

Climatic summaries and documentation for the primary meteorological station, H.J. Andrews Experimental Forest, 1972 To 1984.

Treesearch

Frederick A. Bierlmaler; Arthur McKee

1989-01-01

This report describes the primary meteorological station at the H.J. Andrews Experimental Forest (elev. 426 m, lat. 44°15' N., long. 122°10' W.) in the Willamette National Forest, the automatic digital data logger, sensors, and data-processing procedures used in measuring air temperature, dewpoint temperature, windspeed, precipitation, and solar radiation....

Managing timber to promote sustainable forests: a second-level course for the Sustainable Forestry Initiative of Pennsylvania

Treesearch

James C. Finley; Susan L. Stout; Timothy G. Pierson; Barbara J. McGuinness

2007-01-01

At least 80 percent of the raw material used for wood products by the forest industry is from privately owned woodlands. This publication provides material for a course designed to help landowners, foresters, and loggers work together to assess whether a planned timber harvest will retain the diversity of species on site. It includes methods for collecting overstory...

Paul Bunyan Takes A Wife--Developing Language, Reading, and Thinking Abilities through Creative Arts: An Alternative to Performance Centered Instruction.

ERIC Educational Resources Information Center

Ward, Pat; And Others

This guide, designed for the elementary level, contains written and oral language activities involving the five senses which are intended to help teachers develop enthusiastic readers. The guide's five sections are as follows: (1) My Very Own Paul Bunyan Songbook; (2) A Logger's Log; (3) Teacher's Instructions for the Magic Wall and Parachute…

Use of a recording fluorometer for continuous measurement of phytoplankton concentration

NASA Astrophysics Data System (ADS)

Mills, David K.; Tett, Paul B.

1990-08-01

By linking a battery operated logger unit and power supply with a submersible fluorometer we have been able to make continuous untended measurements ofphytoplankton chlorophyll fluorescence, and hence estimate algal biomass for periods of up to 35 days at moorings. Calibration aixi data processing procedures are described, and some examples of the results of deployments in waters around the United Kingdom are presented.

Microgravity

NASA Image and Video Library

1992-10-01

MSFC Test Engineer performing a functional test on the TES. The TES can be operated as a refrigerator, with a minimum set point temperature of 4.0 degrees C, or as an incubator, with a maximum set point temperature 40.0 degrees C of the set point. The TES can be set to maintain a constant temperature or programmed to change temperature settings over time, internal temperature recorded by a date logger.

Factors that affect fuel consumption in logging systems

Treesearch

Jonathan Kenney; Thomas Gallagher; Matthew Smidt; Dana Mitchell; Timothy and McDonald

2014-01-01

Fuel consumption is an important aspect of the efficiency of timber harvesting. Since loggers are paid based on the weight of wood they produce, it is important to note how many gallons of fuel it takes to produce one ton of wood. An extensive literature review was conducted to evaluate different harvesting systems and the amount of fuel they consumed per unit of wood...

The Use of Microcomputer Based Laboratories in Chemistry Secondary Education: Present State of the Art and Ideas for Research-Based Practice

ERIC Educational Resources Information Center

Tortosa, Montserrat

2012-01-01

In microcomputer based laboratories (MBL) and data loggers, one or more sensors are connected to an interphase and this to a computer. This equipment allows visualization in real time of the variables of an experiment and provides the possibility of measuring magnitudes which are difficult to measure with traditional equipment. Research shows that…

Teaching Notes

NASA Astrophysics Data System (ADS)

2001-11-01

Where teachers share ideas and teaching solutions with the wider physics teaching community: contact ped@iop.org. Contents: Technical Trimmings: The ALBA interface and logger Technical Trimmings: A constant velocity apparatus based on Lenz's Law On the Map: Ashfield School: A Technology College Let's Investigate: Microwave frustration Physics on a Shoestring: Variation of pressure with depth Starting Out: First Year Fun! My Way: Grüneisen's law for the classroom Curiosity: Aqua-Magic

A case study assessing opportunity costs and ecological benefits of streamside management zones and logging systems for eastern hardwood forests

Treesearch

Chris B. LeDoux; Ethel Wilkerson

2006-01-01

Forest landowners, managers, loggers, land-use planners, and other decision and policy-makers need to understand the opportunity costs and ecological benefits associated with different widths of streamside management zones (SMZs). In this paper, a simulation model was used to assess the opportunity costs of SMZ retention for four different logging systems, two mature...

Changes in soil moisture and pore pressure after harvesting a forested hillslope in northern California

Treesearch

Elizabeth T. Keppeler; Robert R. Ziemer; Peter H. Cafferata

1994-01-01

Abstract - In 1987, a 0.83-ha zero-order swale was instrumented with 58 pierometers and 25 tensiometers along several hillslope transects. Through 1993, soil moisture conditions were measured by pressure transducers connected to a digital data logger recording at 15-minute intervals. In August 1989, the 100-year-old second-growth forest in the swale was felled. Logs...

Lumber or chips? A comparison of small-log utilization alternatives

Treesearch

Barney Dowdle; Robert Bain

1961-01-01

A sawmill in the Northeast commonly receives a number of small low-quality logs. They may be among logs purchased from independent loggers, or timber-sale specifications may require that the sawmill take them. Some mill operators confronted with logs of this kind consider handling them as part of the cost of obtaining their log supply. Others may feel that, since the...

Temporal and spatial variation in temperature experienced by macrofauna at Main Endeavour hydrothermal vent field

NASA Astrophysics Data System (ADS)

Lee, Raymond W.; Robert, Katleen; Matabos, Marjolaine; Bates, Amanda E.; Juniper, S. Kim

2015-12-01

A significant focus of hydrothermal vent ecological studies has been to understand how species cope with various stressors through physiological tolerance and biochemical resistance. Yet, the environmental conditions experienced by vent species have not been well characterized. This objective requires continuous observations over time intervals that can capture environmental variability at scales that are relevant to animals. We used autonomous temperature logger arrays (four roughly parallel linear arrays of 12 loggers spaced every 10-12 cm) to study spatial and temporal variations in the thermal regime experienced by hydrothermal vent macrofauna at a diffuse flow vent. Hourly temperatures were recorded over eight months from 2010 to 2011 at Grotto vent in the Main Endeavour vent field on the Juan de Fuca Ridge, a focus area of the Ocean Networks Canada cabled observatory. The conspicuous animal assemblages in video footage contained Ridgeia piscesae tubeworms, gastropods (primarily Lepetodrilus fucensis), and polychaetes (polynoid scaleworms and the palm worm Paralvinella palmiformis). Two dimensional spatial gradients in temperature were generally stable over the deployment period. The average temperature recorded by all arrays, and in some individual loggers, revealed distinctive fluctuations in temperature that often corresponded with the tidal cycle. We postulate that this may be related to changes in bottom currents or fluctuations in vent discharge. A marked transient temperature increase lasting over a period of days was observed in April 2011. While the distributions and behavior of Juan de Fuca Ridge vent invertebrates may be partially constrained by environmental temperature and temperature tolerance, except for the one transient high-temperature event, observed fluid temperatures were generally similar to the thermal preferences for some species, and typically well below lethal temperatures for all species. Average temperatures of the four arrays ranged from 4.1 to 11.0 °C during the deployment, indicating that on an hourly timescale the temperature conditions in this tubeworm community were fairly moderate and stable. The generality of these findings and behavioral responses of vent organisms to predictable rhythmicity and non-periodic temperature shifts are areas for further investigation.

Ways to measure body temperature in the field.

PubMed

Langer, Franz; Fietz, Joanna

2014-05-01

Body temperature (Tb) represents one of the key parameters in ecophysiological studies with focus on energy saving strategies. In this study we therefore comparatively evaluated the usefulness of two types of temperature-sensitive passive transponders (LifeChips and IPTT-300) and one data logger (iButton, DS1922L) mounted onto a collar to measure Tb in the field. First we tested the accuracy of all three devices in a water bath with water temperature ranging from 0 to 40°C. Second, we evaluated the usefulness of the LifeChips and the modified iButtons for measuring Tb of small heterothermic mammals under field conditions. For this work we subcutaneously implanted 14 male edible dormice (Glis glis) with transponders, and equipped another 14 males with data loggers to simultaneously record Tb and oxygen consumption with a portable oxygen analyzer (Oxbox). In one individual we recorded Tb with both devices and analyzed recorded Tb patterns. LifeChips are able to measure temperature within the smallest range from 25 to 40°C with an accuracy of 0.07±0.12°C. IPTT-300 transponders measured temperature between 10 and 40°C, but accuracy decreased considerably at values below 30°C, with maximal deviations of nearly 7°C. An individual calibration of each transponder is therefore needed, before using it at low Tbs. The accuracy of the data logger was comparatively good (0.12±0.25°C) and stable over the whole temperature range tested (0-40°C). In all three devices, the repeatability of measurements was high. LifeChip transponders as well as modified iButtons measured Tb reliably under field conditions. Simultaneous Tb-recordings in one edible dormouse with an implanted LifeChip and a collar-mounted iButton revealed that values of both measurements were closely correlated. Taken together, we conclude that implanted temperature-sensitive transponders represent an appropriate and largely non-invasive method to measure Tb also under field conditions. Copyright © 2014 Elsevier Ltd. All rights reserved.

New Coastal Tsunami Gauges: Application at Augustine Volcano, Cook Inlet, Alaska

NASA Astrophysics Data System (ADS)

Burgy, M.; Bolton, D. K.

2006-12-01

Recent eruptive activity at Augustine Volcano and its associated tsunami threat to lower Cook Inlet pointed out the need for a quickly deployable tsunami detector which could be installed on Augustine Island's coast. The detector's purpose would be to verify tsunami generation by direct observation of the wave at the source to support tsunami warning decisions along populated coastlines. To fill this need the Tsunami Mobile Alert Real-Time (TSMART) system was developed at NOAA's West Coast/Alaska Tsunami Warning Center with support from the University of Alaska Tsunami Warning and Environmental Observatory for Alaska program (TWEAK) and the Alaska Volcano Observatory (AVO). The TSMART system consists of a pressure sensor installed as near as possible to the low tide line. The sensor is enclosed in a water-tight hypalon bag filled with propylene-glycol to prevent silt damage to the sensor and freezing. The bag is enclosed in a perforated, strong plastic pipe about 16 inches long and 8 inches in diameter enclosed at both ends for protection. The sensor is cabled to a data logger/radio/power station up to 300 feet distant. Data are transmitted to a base station and made available to the warning center in real-time through the internet. This data telemetry system can be incorporated within existing AVO and Plate Boundary Observatory networks which makes it ideal for volcano-tsunami monitoring. A TSMART network can be utilized anywhere in the world within 120 miles of an internet connection. At Augustine, two test stations were installed on the east side of the island in August 2006. The sensors were located very near the low tide limit and covered with rock, and the cable was buried to the data logger station which was located well above high tide mark. Data logger, radio, battery and other electronics are housed in an enclosure mounted to a pole which also supports an antenna and solar panel. Radio signal is transmitted to a repeater station higher up on the island which then transmits the data to a base station in Homer, Alaska. Sea level data values are transmitted every 15 seconds and displayed at the tsunami warning center in Palmer, Alaska.

Geomicrobial Optical Logging Detectors (GOLD)

NASA Astrophysics Data System (ADS)

Bramall, N. E.; Stoker, C. R.; Price, P. B.; Coates, J. D.; Allamandola, L. J.; Mattioda, A. L.

2008-12-01

We will present concepts for downhole instrumentation that could be used in the Deep Underground Science and Engineering Laboratory (DUSEL). We envision optical borehole-logging instruments that could monitor bacterial concentration, mineralogy, aromatic organics, temperature and oxygen concentration, allowing for the in situ monitoring of time-dependent microbial and short-scale geologic processes and provide valuable in situ data on stratigraphy to supplement core analyses, especially where instances of missing or damaged core sections make such studies difficult. Incorporated into these instruments will be a sampling/inoculation tool to allow for the recovery and/or manipulation of particularly interesting sections of the borehole wall for further study, enabling a series of microbiological studies. The borehole tools we will develop revolve around key emerging technologies and methods, some of which are briefly described below: 1) Autofluorescence Spectroscopy: Building on past instruments, we will develop a new borehole logger that searches for microbial life and organics using fluorescence spectroscopy. Many important organic compounds (e.g. PAHs) and biomolecules (e.g. aromatic amino acids, proteins, methanogenic coenzymes) fluoresce when excited with ultraviolet and visible light. Through the careful selection of excitation wavelength(s) and temporal gating parameters, a borehole logging instrument can detect and differentiate between these different compounds and the mineral matrix in which they exist. 2) Raman Spectroscopy: Though less sensitive than fluorescence spectroscopy, Raman spectroscopy is more definitive: it can provide important mineral phase distribution/proportions and other chemical data enabling studies of mineralogy and microbe-mineral interactions (when combined with fluorescence). 3) Borehole Camera: Imaging of the borehole wall with extended information in the UV, visible, and NIR for a more informative view can provide a lot of insight to in situ processes. 4) Temperature and Oxygen Sensors: The ambient temperature will be recorded as well as the presence of oxygen. Oxygen presence can be measured using a fluorescence quenching fiber optic probe to avoid interference from other gases. We forsee that this technology will enable experiments including studies of gene transfer, microbial habitat, in situ stratigraphy and hydrological processes. In addition, though designed to scan borehole walls, GOLD could be used to scan core samples as they are recovered for rapid quantification and analysis in order to discover samples of particular interest that could then be prioritized for more in-depth, traditional analysis.

What loggers leave behind: Impacts on big-leaf mahogany (Swietenia macrophylla) commercial populations and potential for post-logging recovery in the Brazilian Amazon.

Treesearch

James Grogan; Stephen B. Jennings; R. Matthew Landis; Mark Schulze; Anadilza M.V. Baima; do Carmo A. Lopes J.; Julian M. Norghauer; L. Rog& eacute Oliveira; rio; Frank Pantoja; Diane Pinto; Jose Natalino M. Silva; Edson Vidal; Barbara L. Zimmerman

2008-01-01

The sustainability of current harvest practices for high-value Meliaceae can be assessed by quantifying logging intensity and projecting growth and survival by post-logging populations over anticipated intervals between harvests. From 100%-area inventories of big-leaf mahogany (Swietenia macrophylla) covering 204 ha or more at eight logged and unlogged forest sites...

105-KE Isolation Barrier Leak Rate Acceptance Test Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

McCracken, K.J.

1995-06-14

This Acceptance Test Report (ATR) contains the completed and signed Acceptance Procedure (ATP) for the 105-KE Isolations Barrier Leak Rate Test. The Test Engineer`s log, the completed sections of the ATP in the Appendix for Repeat Testing (Appendix K), the approved WHC J-7s (Appendix H), the data logger files (Appendices T and U), and the post test calibration checks (Appendix V) are included.

Study of the Effects of Drugs upon the Cardiovascular and Respiratory Systems

DTIC Science & Technology

1986-06-01

ed. The C.V. Mosby Company, St . Louis, 1971. Spence, 3.T., Underwood, B.3., Duncan, C.P., and Cotton, J.W. Elementary Statistics. Appleton- Century ...I.I)" ,,,- 20. DISTRIBUTION/AVAILABILITY OF ABSTRACT 21 . ABSTRACT SECURITY CLASSIFICATION C3 UNCLASSIFIED/UNLIMITED 0 SAME AS RPT. - OTIC USERS...50, resistance units - -. ° ! U { {{{{{{ {{{{{{{{{{{{{{{ { {{{{ I {{{ {{{{ { {{{{{{ {{{{{{{ {{{{{ 21 3. Calibration of the Buxco Data Logger Model DL

Gypsy moth (Lepidoptera: Lymantriidae) flight behavior and phenology based on field-deployed automated pheromone-baited traps

Treesearch

Patrick C. Tobin; Kenneth T. Klein; Donna S. Leonard

2009-01-01

Populations of the gypsy moth, Lymantria dispar (L.), are extensively monitored in the United States through the use of pheromone-baited traps.We report on use of automated pheromone-baited traps that use a recording sensor and data logger to record the unique date-time stamp of males as they enter the trap.We deployed a total of 352 automated traps...

The Effects of a Seatbelt-Gearshift Delay Prompt on the Seatbelt Use of Motorists Who Do Not Regularly Wear Seatbelts

ERIC Educational Resources Information Center

Van Houten, Ron; Malenfant, J.E. Louis; Austin, John; Lebbon, Angie

2005-01-01

A seatbelt-gearshift delay was evaluated in two U.S. and three Canadian vehicles using a reversal design. The seatbelt-gearshift delay required unbelted drivers either to buckle their seatbelts or to wait a specified time before they could put the vehicle in gear. After collecting behavioral prebaseline data, a data logger was installed in all…

Functional Test on (TES) Thermal Enclosure System

NASA Technical Reports Server (NTRS)

1992-01-01

MSFC Test Engineer performing a functional test on the TES. The TES can be operated as a refrigerator, with a minimum set point temperature of 4.0 degrees C, or as an incubator, with a maximum set point temperature 40.0 degrees C of the set point. The TES can be set to maintain a constant temperature or programmed to change temperature settings over time, internal temperature recorded by a date logger.

MDR/Omni-band Reconfigurable Terminal: Design Concept

DTIC Science & Technology

1998-09-01

tasks, data bases and major communications flows. Global issues relevant to most of the blocks are then covered. Finally the planned sequence of...and event logger that are detailed in later paragraphs. The BITE(built-in test equipment)/Debugger detail can be found separately in the Global Issues paragraphs...conditions. Every part of the simulator has a BITE/Debugger component, the general description of which is given in Global Issues . Simulator control

Position Paper - pFLogger: The Parallel Fortran Logging framework for HPC Applications

NASA Technical Reports Server (NTRS)

Clune, Thomas L.; Cruz, Carlos A.

2017-01-01

In the context of high performance computing (HPC), software investments in support of text-based diagnostics, which monitor a running application, are typically limited compared to those for other types of IO. Examples of such diagnostics include reiteration of configuration parameters, progress indicators, simple metrics (e.g., mass conservation, convergence of solvers, etc.), and timers. To some degree, this difference in priority is justifiable as other forms of output are the primary products of a scientific model and, due to their large data volume, much more likely to be a significant performance concern. In contrast, text-based diagnostic content is generally not shared beyond the individual or group running an application and is most often used to troubleshoot when something goes wrong. We suggest that a more systematic approach enabled by a logging facility (or logger) similar to those routinely used by many communities would provide significant value to complex scientific applications. In the context of high-performance computing, an appropriate logger would provide specialized support for distributed and shared-memory parallelism and have low performance overhead. In this paper, we present our prototype implementation of pFlogger a parallel Fortran-based logging framework, and assess its suitability for use in a complex scientific application.

GPS-tracking and colony observations reveal variation in offshore habitat use and foraging ecology of breeding Sandwich Terns

NASA Astrophysics Data System (ADS)

Fijn, R. C.; de Jong, J.; Courtens, W.; Verstraete, H.; Stienen, E. W. M.; Poot, M. J. M.

2017-09-01

Breeding success of seabirds critically depends on their foraging success offshore. However, studies combining at-sea tracking and visual provisioning observations are scarce, especially for smaller species of seabirds. This study is the first in which breeding Sandwich Terns were tracked with GPS-loggers to collect detailed data on foraging habitat use in four breeding seasons. The maximum home range of individual Sandwich Terns comprised approximately 1900 km2 and the average foraging range was 27 km. Trip durations were on average 135 min with average trip lengths of 67 km. Actual foraging behaviour comprised 35% of the time budget of a foraging trip. Substantial year-to-year variation was found in habitat use and trip variables, yet with the exception of 2012, home range size remained similar between years. Food availability, chick age and environmental conditions are proposed as the main driving factors between inter- and intra-annual variations in trip variables. Our multi-method approach also provided geo-referenced information on prey presence and we conclude that future combining of colony observations and GPS-loggers deployments can potentially provide a near complete insight into the feeding ecology of breeding Sandwich Terns, including the behaviour of birds at sea.

Precision Monitoring of Water Level in a Salt Marsh with Low Cost Tilt Loggers

NASA Astrophysics Data System (ADS)

Sheremet, Vitalii A.; Mora, Jordan W.

2016-04-01

Several salt pannes and pools in the Sage Lot tidal marsh of Waquoit Bay system, MA were instrumented with newly developed Arm-and-Float water level gauges (utilizing accelerometer tilt logger) permitting to record water level fluctuations with accuracy of 1 mm and submillimeter resolution. The methodology of the instrument calibration, deployment, and elevation control are described. The instrument performance was evaluated. Several month long deployments allowed us to analyze the marsh flooding and draining processes, study differences among the salt pannes. The open channel flow flooding-draining mechanism and slower seepage were distinguished. From the drain curve the seepage rate can be quantified. The seepage rate remains approximately constant for all flooding draining episodes, but varies from panne to panne depending on bottom type and location. Seasonal differences due to the growth of vegetation are also recorded. The analysis of rain events allows us to estimate the catch area of subbasins in the marsh. The implication for marsh ecology and marsh accretion are discussed. The gradual sea level rise coupled with monthly tidal datum variability and storm surges result in migration and development of a salt marsh. The newly developed low cost instrumentation allows us to record and analyze these changes and may provide guidance for the ecological management.

Extending laboratory automation to the wards: effect of an innovative pneumatic tube system on diagnostic samples and transport time.

PubMed

Suchsland, Juliane; Winter, Theresa; Greiser, Anne; Streichert, Thomas; Otto, Benjamin; Mayerle, Julia; Runge, Sören; Kallner, Anders; Nauck, Matthias; Petersmann, Astrid

2017-02-01

The innovative pneumatic tube system (iPTS) transports one sample at a time without the use of cartridges and allows rapid sending of samples directly into the bulk loader of a laboratory automation system (LAS). We investigated effects of the iPTS on samples and turn-around time (TAT). During transport, a mini data logger recorded the accelerations in three dimensions and reported them in arbitrary area under the curve (AUC) units. In addition representative quantities of clinical chemistry, hematology and coagulation were measured and compared in 20 blood sample pairs transported by iPTS and courier. Samples transported by iPTS were brought to the laboratory (300 m) within 30 s without adverse effects on the samples. The information retrieved from the data logger showed a median AUC of 7 and 310 arbitrary units for courier and iPTS transport, respectively. This is considerably below the reported limit for noticeable hemolysis of 500 arbitrary units. iPTS reduces TAT by reducing the hands-on time and a fast transport. No differences in the measurement results were found for any of the investigated 36 analytes between courier and iPTS transport. Based on these findings the iPTS was cleared for clinical use in our hospital.

POSITION PAPER - pFLogger: The Parallel Fortran Logging Framework for HPC Applications

NASA Technical Reports Server (NTRS)

Clune, Thomas L.; Cruz, Carlos A.

2017-01-01

In the context of high performance computing (HPC), software investments in support of text-based diagnostics, which monitor a running application, are typically limited compared to those for other types of IO. Examples of such diagnostics include reiteration of configuration parameters, progress indicators, simple metrics (e.g., mass conservation, convergence of solvers, etc.), and timers. To some degree, this difference in priority is justifiable as other forms of output are the primary products of a scientific model and, due to their large data volume, much more likely to be a significant performance concern. In contrast, text-based diagnostic content is generally not shared beyond the individual or group running an application and is most often used to troubleshoot when something goes wrong. We suggest that a more systematic approach enabled by a logging facility (or 'logger') similar to those routinely used by many communities would provide significant value to complex scientific applications. In the context of high-performance computing, an appropriate logger would provide specialized support for distributed and shared-memory parallelism and have low performance overhead. In this paper, we present our prototype implementation of pFlogger - a parallel Fortran-based logging framework, and assess its suitability for use in a complex scientific application.

Surfacers change their dive tactics depending on the aim of the dive: evidence from simultaneous measurements of breaths and energy expenditure.

PubMed

Okuyama, Junichi; Tabata, Runa; Nakajima, Kana; Arai, Nobuaki; Kobayashi, Masato; Kagawa, Shiro

2014-11-22

Air-breathing divers are assumed to have evolved to apportion their time between surface and underwater periods to maximize the benefit gained from diving activities. However, whether they change their time allocation depending on the aim of the dive is still unknown. This may be particularly crucial for 'surfacers' because they dive for various purposes in addition to foraging. In this study, we counted breath events at the surface and estimated oxygen consumption during resting, foraging and other dives in 11 green turtles (Chelonia mydas) in the wild. Breath events were counted by a head-mounted acceleration logger or direct observation based on an animal-borne video logger, and oxygen consumption was estimated by measuring overall dynamic body acceleration. Our results indicate that green turtles maximized their submerged time, following this with five to seven breaths to replenish oxygen for resting dives. However, they changed their dive tactic during foraging and other dives; they surfaced without depleting their estimated stores of oxygen, followed by only a few breaths for effective foraging and locomotion. These dichotomous surfacing tactics would be the result of behavioural modifications by turtles depending on the aim of each dive. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

Maturation of Structural Health Management Systems for Solid Rocket Motors

NASA Technical Reports Server (NTRS)

Quing, Xinlin; Beard, Shawn; Zhang, Chang

2011-01-01

Concepts of an autonomous and automated space-compliant diagnostic system were developed for conditioned-based maintenance (CBM) of rocket motors for space exploration vehicles. The diagnostic system will provide real-time information on the integrity of critical structures on launch vehicles, improve their performance, and greatly increase crew safety while decreasing inspection costs. Using the SMART Layer technology as a basis, detailed procedures and calibration techniques for implementation of the diagnostic system were developed. The diagnostic system is a distributed system, which consists of a sensor network, local data loggers, and a host central processor. The system detects external impact to the structure. The major functions of the system include an estimate of impact location, estimate of impact force at impacted location, and estimate of the structure damage at impacted location. This system consists of a large-area sensor network, dedicated multiple local data loggers with signal processing and data analysis software to allow for real-time, in situ monitoring, and longterm tracking of structural integrity of solid rocket motors. Specifically, the system could provide easy installation of large sensor networks, onboard operation under harsh environments and loading, inspection of inaccessible areas without disassembly, detection of impact events and impact damage in real-time, and monitoring of a large area with local data processing to reduce wiring.

Measuring Device for Air Speed in Macroporous Media and Its Application Inside Apple Storage Bins

PubMed Central

Geyer, Martin; Praeger, Ulrike; Scaar, Holger; Neuwald, Daniel A.; Gottschalk, Klaus

2018-01-01

In cold storage facilities of fruit and vegetables, airflow is necessary for heat removal. The design of storage facilities influences the air speed in the surrounding of the product. Therefore, knowledge about airflow next to the product is important to plan the layout of cold stores adapted to the requirements of the products. A new sensing device (ASL, Air speed logger) is developed for omnidirectional measurement of air speed between fruit or vegetables inside storage bins or in bulk. It consists of four interconnected plastic spheres with 80 mm diameter each, adapted to the size of apple fruit. In the free space between the spheres, silicon diodes are fixed for the airflow measurement based on a calorimetric principle. Battery and data logger are mounted inside the spheres. The device is calibrated in a wind tunnel in a measuring range of 0–1.3 m/s. Air speed measurements in fruit bulks on laboratory scale and in an industrial fruit store show air speeds in gaps between fruit with high stability at different airflow levels. Several devices can be placed between stored products for determination of the air speed distribution inside bulks or bin stacks in a storage room. PMID:29438339

Surfacers change their dive tactics depending on the aim of the dive: evidence from simultaneous measurements of breaths and energy expenditure

PubMed Central

Okuyama, Junichi; Tabata, Runa; Nakajima, Kana; Arai, Nobuaki; Kobayashi, Masato; Kagawa, Shiro

2014-01-01

Air-breathing divers are assumed to have evolved to apportion their time between surface and underwater periods to maximize the benefit gained from diving activities. However, whether they change their time allocation depending on the aim of the dive is still unknown. This may be particularly crucial for ‘surfacers’ because they dive for various purposes in addition to foraging. In this study, we counted breath events at the surface and estimated oxygen consumption during resting, foraging and other dives in 11 green turtles (Chelonia mydas) in the wild. Breath events were counted by a head-mounted acceleration logger or direct observation based on an animal-borne video logger, and oxygen consumption was estimated by measuring overall dynamic body acceleration. Our results indicate that green turtles maximized their submerged time, following this with five to seven breaths to replenish oxygen for resting dives. However, they changed their dive tactic during foraging and other dives; they surfaced without depleting their estimated stores of oxygen, followed by only a few breaths for effective foraging and locomotion. These dichotomous surfacing tactics would be the result of behavioural modifications by turtles depending on the aim of each dive. PMID:25297856

Post-Colonization Interval Estimates Using Multi-Species Calliphoridae Larval Masses and Spatially Distinct Temperature Data Sets: A Case Study

PubMed Central

Weatherbee, Courtney R.; Pechal, Jennifer L.; Stamper, Trevor; Benbow, M. Eric

2017-01-01

Common forensic entomology practice has been to collect the largest Diptera larvae from a scene and use published developmental data, with temperature data from the nearest weather station, to estimate larval development time and post-colonization intervals (PCIs). To evaluate the accuracy of PCI estimates among Calliphoridae species and spatially distinct temperature sources, larval communities and ambient air temperature were collected at replicate swine carcasses (N = 6) throughout decomposition. Expected accumulated degree hours (ADH) associated with Cochliomyia macellaria and Phormia regina third instars (presence and length) were calculated using published developmental data sets. Actual ADH ranges were calculated using temperatures recorded from multiple sources at varying distances (0.90 m–7.61 km) from the study carcasses: individual temperature loggers at each carcass, a local weather station, and a regional weather station. Third instars greatly varied in length and abundance. The expected ADH range for each species successfully encompassed the average actual ADH for each temperature source, but overall under-represented the range. For both calliphorid species, weather station data were associated with more accurate PCI estimates than temperature loggers associated with each carcass. These results provide an important step towards improving entomological evidence collection and analysis techniques, and developing forensic error rates. PMID:28375172

APNEA list mode data acquisition and real-time event processing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hogle, R.A.; Miller, P.; Bramblett, R.L.

1997-11-01

The LMSC Active Passive Neutron Examinations and Assay (APNEA) Data Logger is a VME-based data acquisition system using commercial-off-the-shelf hardware with the application-specific software. It receives TTL inputs from eighty-eight {sup 3}He detector tubes and eight timing signals. Two data sets are generated concurrently for each acquisition session: (1) List Mode recording of all detector and timing signals, timestamped to 3 microsecond resolution; (2) Event Accumulations generated in real-time by counting events into short (tens of microseconds) and long (seconds) time bins following repetitive triggers. List Mode data sets can be post-processed to: (1) determine the optimum time bins formore » TRU assay of waste drums, (2) analyze a given data set in several ways to match different assay requirements and conditions and (3) confirm assay results by examining details of the raw data. Data Logger events are processed and timestamped by an array of 15 TMS320C40 DSPs and delivered to an embedded controller (PowerPC604) for interim disk storage. Three acquisition modes, corresponding to different trigger sources are provided. A standard network interface to a remote host system (Windows NT or SunOS) provides for system control, status, and transfer of previously acquired data. 6 figs.« less

Short- and long-term monitoring of underwater sound levels in the Hudson River (New York, USA).

PubMed

Martin, S Bruce; Popper, Arthur N

2016-04-01

There is a growing body of research on natural and man-made sounds that create aquatic soundscapes. Less is known about the soundscapes of shallow waters, such as in harbors, rivers, and lakes. Knowledge of soundscapes is needed as a baseline against which to determine the changes in noise levels resulting from human activities. To provide baseline data for the Hudson River at the site of the Tappan Zee Bridge, 12 acoustic data loggers were deployed for a 24-h period at ranges of 0-3000 m from the bridge, and four of the data loggers were re-deployed for three months of continuous recording. Results demonstrate that this region of the river is relatively quiet compared to open ocean conditions and other large river systems. Moreover, the soundscape had temporal and spatial diversity. The temporal patterns of underwater noise from the bridge change with the cadence of human activity. Bridge noise (e.g., road traffic) was only detected within 300 m; farther from the bridge, boating activity increased sound levels during the day, and especially on the weekend. Results also suggest that recording near the river bottom produced lower pseudo-noise levels than previous studies that recorded in the river water column.

Traditional Chinese Medicine Improves Activities of Daily Living in Parkinson's Disease

PubMed Central

Pan, Weidong; Kwak, Shin; Liu, Yun; Sun, Yan; Fang, Zhenglong; Qin, Baofeng; Yamamoto, Yoshiharu

2011-01-01

We evaluated the effects of a traditional Chinese medicine (TCM), named Zeng-xiao An-shen Zhi-chan 2 (ZAZ2), on patients with Parkinson's disease (PD). Among 115 patients with idiopathic PD enrolled (mean age, 64.7 ± 10.2 years old), 110 patients (M = 65, F = 45; mean age, 64.9 ± 10.7 years old) completed the study. Patients took either ZAZ2 (n = 59) or placebo granule (n = 56) in a blind manner for 13 weeks while maintaining other anti-Parkinson medications unchanged. All participants wore a motion logger, and we analyzed the power-law temporal autocorrelation of the motion logger records taken on 3 occasions (before, one week, and 13 weeks after the drug administration). Drug efficacy was evaluated with the conventional Unified Parkinson Disease Rating Scale (UPDRS), as well as the power-law exponent α, which corresponds to the level of physical activity of the patients. ZAZ2 but not placebo granule improved the awake-sleep rhythm, the UPDRS Part II, Part II + III, and Part IV scores, and the α values. The results indicate that ZAZ2 improved activities of daily living (ADL) of parkinsonism and, thus, is a potentially suitable drug for long-term use. PMID:21687764

A composite lithology log while drilling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tannenbaum, E.; Sutcliffe, B.; Franks, A.

A new method for producing a computerized composite lithology log (CLL) while drilling by integrating MWD (measurement while drilling) and surface data is described. At present, lithology logs are produced at the well site by mud loggers. They provide basic description and relative amounts of lithologies. Major difficulties are encountered in relating the cuttings to their original formations due to mixing in the drilling mud while transporting to the surface, sloughing shales, flawed sampling, etc. This results in a poor control on the stratigraphic sequence and on the depth of formation boundaries. A composite log can be produced after drillingmore » this additional inputs such as wireline, petrography, and paleontology. This process is labor intensive and expensive. The CLL integrates three types of data (MWD mechanical, MWD geophysical, and surface cuttings) acquired during drilling, in three time stages: (1) Real Time. MWD drilling mechanical data including the rate of penetration and the downhole torque. This stage would provide bed boundaries and some inferred lithology. This would assist the driller with immediate drilling decisions and determine formation tops for coring, casing point, and correlation. (2) MWD Time. Recomputation of the above by adding MWD geophysical data (gamma-ray, resistivity, neutron-density). This stage would upgrade the lithology inference, and give higher resolution to bed boundaries, (3) Lag Time. Detailed analysis of surface cuttings to confirm the inferred lithologies. This last input results in a high-quality CLL with accurate lithologies and bed boundaries.« less

Geolocators reveal migration and pre-breeding behaviour of the critically endangered Balearic Shearwater Puffinus mauretanicus.

PubMed

Guilford, Tim; Wynn, Russell; McMinn, Miguel; Rodríguez, Ana; Fayet, Annette; Maurice, Lou; Jones, Alice; Meier, Rhiannon

2012-01-01

Using combined miniature archival light and salt-water immersion loggers, we characterise the year-round individual at-sea movements of Europe's only critically endangered seabird, the Balearic shearwater Puffinus mauretanicus, for the first time. Focusing on the non-breeding period, we show that all of the 26 breeding birds tracked from their breeding site on Mallorca in the Mediterranean Sea successfully made a 2-4 month migration into the Atlantic Ocean, where they utilised well-defined core areas off Portuguese and French coasts. As well as identifying high-risk areas in the Atlantic, our results confirm that breeding birds spend most of the year concentrated around productive waters of the Iberian shelf in the western Mediterranean. Migration phenology appeared largely unrelated to the subsequent (distinctly synchronous) breeding attempt, suggesting that any carry-over effects were compensated for during a long pre-laying period spent over winter in the Mediterranean. Using the light and salt-water immersion data alone we were also able to characterise the pattern of pre-laying visits to the colony in considerable detail, demonstrating that breeding pairs appear to coordinate their over-day visits using a high frequency of night-time visits throughout the winter. Our study shows that geolocation technology is a valuable tool for assessing the spatial distribution of risks to this critically endangered species, and also provides a low-impact method for remotely observing the detailed behaviour of seabird species that may be sensitive to disturbance from traditional study methods.

Identification and Analysis of Putative Homologues of Mechanosensitive Channels in Pathogenic Protozoa

PubMed Central

Prole, David L.; Taylor, Colin W.

2013-01-01

Mechanosensitive channels play important roles in the physiology of many organisms, and their dysfunction can affect cell survival. This suggests that they might be therapeutic targets in pathogenic organisms. Pathogenic protozoa lead to diseases such as malaria, dysentery, leishmaniasis and trypanosomiasis that are responsible for millions of deaths each year worldwide. We analyzed the genomes of pathogenic protozoa and show the existence within them of genes encoding putative homologues of mechanosensitive channels. Entamoeba histolytica, Leishmania spp., Trypanosoma cruzi and Trichomonas vaginalis have genes encoding homologues of Piezo channels, while most pathogenic protozoa have genes encoding homologues of mechanosensitive small-conductance (MscS) and K+-dependent (MscK) channels. In contrast, all parasites examined lack genes encoding mechanosensitive large-conductance (MscL), mini-conductance (MscM) and degenerin/epithelial Na+ (DEG/ENaC) channels. Multiple sequence alignments of evolutionarily distant protozoan, amoeban, plant, insect and vertebrate Piezo channel subunits define an absolutely conserved motif that may be involved in channel conductance or gating. MscS channels are not present in humans, and the sequences of protozoan and human homologues of Piezo channels differ substantially. This suggests the possibility for specific targeting of mechanosensitive channels of pathogens by therapeutic drugs. PMID:23785469

Inactivation of bacterial biofilms using visible-light-activated unmodified ZnO nanorods

NASA Astrophysics Data System (ADS)

Aponiene, Kristina; Serevičius, Tomas; Luksiene, Zivile; Juršėnas, Saulius

2017-09-01

Various zinc oxide (ZnO) nanostructures are widely used for photocatalytic antibacterial applications. Since ZnO possesses a wide bandgap, it is believed that only UV light may efficiently assist bacterial inactivation, and diverse crystal lattice modifications should be applied in order to narrow the bandgap for efficient visible-light absorption. In this work we show that even unmodified ZnO nanorods grown by an aqueous chemical growth technique are found to possess intrinsic defects that can be activated by visible light (λ = 405 nm) and successfully applied for total inactivation of various highly resistant bacterial biofilms rather than more sensitive planktonic bacteria. Time-resolved fluorescence analysis has revealed that visible-light excitation creates long-lived charge carriers (τ > 1 μs), which might be crucial for destructive biochemical reactions achieving significant bacterial biofilm inactivation. ZnO nanorods covered with bacterial biofilms of Enterococcus faecalis MSCL 302 after illumination by visible light (λ = 405 nm) were inactivated by 2 log, and Listeria monocytogenes ATCL3C 7644 and Escherichia coli O157:H7 biofilms by 4 log. Heterogenic waste-water microbial biofilms, consisting of a mixed population of mesophilic bacteria after illumination with visible light were also completely destroyed.

Computational prediction of atomic structures of helical membrane proteins aided by EM maps.

PubMed

Kovacs, Julio A; Yeager, Mark; Abagyan, Ruben

2007-09-15

Integral membrane proteins pose a major challenge for protein-structure prediction because only approximately 100 high-resolution structures are available currently, thereby impeding the development of rules or empirical potentials to predict the packing of transmembrane alpha-helices. However, when an intermediate-resolution electron microscopy (EM) map is available, it can be used to provide restraints which, in combination with a suitable computational protocol, make structure prediction feasible. In this work we present such a protocol, which proceeds in three stages: 1), generation of an ensemble of alpha-helices by flexible fitting into each of the density rods in the low-resolution EM map, spanning a range of rotational angles around the main helical axes and translational shifts along the density rods; 2), fast optimization of side chains and scoring of the resulting conformations; and 3), refinement of the lowest-scoring conformations with internal coordinate mechanics, by optimizing the van der Waals, electrostatics, hydrogen bonding, torsional, and solvation energy contributions. In addition, our method implements a penalty term through a so-called tethering map, derived from the EM map, which restrains the positions of the alpha-helices. The protocol was validated on three test cases: GpA, KcsA, and MscL.

An updated rate-of-spread clock

USGS Publications Warehouse

Kolaks, Jeremy; Grabner, Keith W.; Hartman, George; Cutter, Bruce E.; Loewenstein, Edward F.

2005-01-01

Several years ago, Blank and Simard (1983) described an electronic timer, frequently referred to as a rate-of-spread (ROS) clock—a relatively simple instrument used in measuring fire spread. Although other techniques for measuring rate of spread are available (such as data loggers), the basic ROS clock remains a valuable and relatively inexpensive tool. However, several items described in the original article have changed. Therefore, we are describing an updated version of the ROS clock.

Physiological Monitoring in Diving Mammals

DTIC Science & Technology

2015-09-30

obtain the required 70 MHz sine wave, we instead created a 10 MHz rectangle pulse wave and used a 70 MHz band pass filter (KR electronics 2657 sma) to...animals (Table 1) were sedated on the beach and transported to Long Marine Laboratory where the data logger was attached and the oximeter sensor...implanted under injectable sedation. In addition, the implantation procedure of the oximeter was assessed and we carefully noted any indications of trauma

Environmental Fluctuations in Forward Scatter and Reverberation

DTIC Science & Technology

2014-09-30

Experiment 2013 (TREX13) was carried out in ~20 m deep water off Panama City, FL [1]. The Marine Physical Laboratory ( MPL ) participated at-sea aboard the...Sharp). In addition, 16 self-recording temperature loggers were attached to two of the VLAs. Source tows and stations were carried out by MPL on 22...Reverberation Experiment 2013 (TREX13): MPL Trip Report,” Marine Physical Laboratory, Scripps Institution of Oceanography, 13 July 2013 (2013). [3

Acoustic Moorings for Integrated Cetacean-Prey Studies

DTIC Science & Technology

2015-09-30

Acoustic Recording Package ( HARP ), consisting of data logger and battery cases, and a hydrophone for passive acoustic monitoring of cetaceans (Wiggins...Hildebrand 2007). The HARPs will be able to record continuously at high enough bandwidth to monitor the full acoustic repertoire of cetaceans...likely to occur in the area. The HARP will be mounted near the bottom of the mooring at approximately 1,000 m depth. The HARPs are made in-house at the

Real-Time Tomography Mooring

DTIC Science & Technology

1992-06-01

Vi th this sampling schedule the data logger has enough (data. storage capacity for, a five yea r deploymeneit-. SYsteim specifica tionis are shown...sit [I t ille check is pwrformed as a virttial device. called -Ilinei check". which is scheduled in the task tabhe aid(] executed by the systsenm cot...PCI as FSK carrier detect input- add function (5) to do timer/counter control - stop counter when defaults set I 6. Instrument scheduler software

Remarks From the section president

NASA Astrophysics Data System (ADS)

Morse, Tony

The old order changeth and Bruce Marsh is hibernating in the forests of Maine, where his fellow loggers wish him well on a much-deserved sabbatical. VGP members have cause to be very grateful for his presidency, in which he inaugurated the Presidents' Breakfasts for the exchange of information among the sections at each of our annual meetings, served heroically on editorial search and audit committees, and ran our section with the kind of loose informality and penetrating insight that it deserves.

Improving Attachments of Non-Invasive (Type III) Electronic Data Loggers to Cetaceans

DTIC Science & Technology

2015-09-30

animals in human care will be performed to test and validate this approach. The cadaver trials will enable controlled testing to failure or with both...quantitative metrics and analysis tools to assess the impact of a tag on the animal . Here we will present: 1) the characterization of the mechanical...fine scale motion analysis for swimming animals . 2 APPROACH Our approach is divided into four subtasks: Task 1: Forces and failure modes

Environmental Fluctuations in Forward Scatter and Reverberation

DTIC Science & Technology

2015-09-30

TREX13) was carried out in ~20 m deep water off Panama City, FL [1]. The Marine Physical Laboratory ( MPL ) participated at-sea aboard the R/V Walton...addition, 16 self-recording temperature loggers were attached to two of the VLAs. Source tows and stations were carried out by MPL on 22-24 April 2013...TREX13): MPL Trip Report,” Marine Physical Laboratory, Scripps Institution of Oceanography, 13 July 2013 (2013). [3] W.S. Hodgkiss, D.E. Ensberg, and

Lea's Pies

NASA Technical Reports Server (NTRS)

1996-01-01

The Technology Transfer Office at Stennis Space Center worked with a pie company owner to develop an inexpensive container that would protect pies and keep them in a near frozen condition for shipping in 48 hours. A NASA engineer made a thermal barrier envelope from a metalized mylar called 'space blanket material,' developed during the Apollo era. The envelope protects the pies from heat transfer. Pictured, a NASA engineer removes the temperature logger from a pecan pie shipped to him in a prototype envelope.

Long-Term Impacts Induced by Disposal of Contaminated River Sediments in Elliott Bay, Seattle, Washington

DTIC Science & Technology

1984-09-01

and these accompanied the sample residue through sieving to avoid sample mix- up . B. Field data sheets required logger’s initials on each page to A...ensure data completeness. C. Metal trays were placed to catch residue spillage during residue transfer from sieves to sample bottles. D. Sample bottles...methodologies were comparable for all sample e types and consisted of four sequential components: extraction, clean- up , gas chromatographic (GC) analysis, and

Acquisition of Ice-Tethered Profilers with Velocity (ITP-V) Instruments for Future Arctic Studies

DTIC Science & Technology

2016-11-15

instrument that measures sea water temperature and salinity versus depth, the ITP-V adds a multi-axis acoustic -travel-time current meter and...housing capped by an ultra-high-molecular-weight polyethylene dome. The electronics case sits within a foam body designed to provide buoyancy for...then transmits them by satellite to a logger computer at WHO I. The ITP-V instruments add a multi-axis acoustic -travel-time current meter and

McStas event logger: Definition and applications

NASA Astrophysics Data System (ADS)

Bergbäck Knudsen, Erik; Bryndt Klinkby, Esben; Kjær Willendrup, Peter

2014-02-01

Functionality is added to the McStas neutron ray-tracing code, which allows individual neutron states before and after a scattering to be temporarily stored, and analysed. This logging mechanism has multiple uses, including studies of longitudinal intensity loss in neutron guides and guide coating design optimisations. Furthermore, the logging method enables the cold/thermal neutron induced gamma background along the guide to be calculated from the un-reflected neutron, using a recently developed MCNPX-McStas interface.

Socio-Demographics and the Development of Malaria Elimination Strategies in the Low Transmission Setting

PubMed Central

Chuquiyauri, Raul; Paredes, Maribel; Peñataro, Pablo; Torres, Sonia; Marin, Silvia; Tenorio, Alexander; Brouwer, Kimberly C.; Abeles, Shira; Llanos-Cuentas, Alejandro; Gilman, Robert H.; Kosek, Margaret; Vinetz, Joseph M.

2011-01-01

This analysis presents a comprehensive description of malaria burden and risk factors in Peruvian Amazon villages where malaria transmission is hypoendemic. More than 9,000 subjects were studied in contrasting village settings within the Department of Loreto, Peru, where most malaria occurs in the country. Plasmodium vivax is responsible for more than 75% of malaria cases; severe disease from any form of malaria is uncommon and death rare. The association between lifetime malaria episodes and individual and household covariates was studied using polychotomous logistic regression analysis, assessing effects on odds of some vs. no lifetime malaria episodes. Malaria morbidity during lifetime was strongly associated with age, logging, farming, travel history, and living with a logger or agriculturist. Select groups of adults, particularly loggers and agriculturists acquire multiple malaria infections in transmission settings outside of the main domicile, and may be mobile human reservoirs by which malaria parasites move within and between micro-regions within malaria endemic settings. For example, such individuals might well be reservoirs of transmission by introducing or reintroducing malaria into their home villages and their own households, depending on vector ecology and the local village setting. Therefore, socio-demographic studies can identify people with the epidemiological characteristic of transmission risk, and these individuals would be prime targets against which to deploy transmission blocking strategies along with insecticide treated bednets and chemoprophylaxis. PMID:22100446

Evaluation of a low cost wireless heat ratio method system for measuring transpiration

NASA Astrophysics Data System (ADS)

Eiriksson, D.; Boyer, B.; Aishlin, P. S.; Bowling, D. R.

2016-12-01

For decades, environmental measurements in remote locations have consisted of sensors hard wired to loggers that send data to central servers via radio, satellite, or cellular telemetry. This model of data collection is effective when all sensors are located in close proximity to the central data logger, such as on a weather station. Frequently, however, in order to adequately capture the spatial heterogeneity associated with environmental processes (e.g., transpiration, soil moisture, or snow depth), it is necessary to install many sensors 10's to 100's of meters from a central data logging station. This presents a practical and financial obstacle when considering the cost of cabling and conduit, in addition to the potential data collection and data quality problems associated with long cable runs. We offer a solution to this persistent challenge with a hybrid datalogging system that combines the power and reliability of Campbell Scientific logging and telemetry equipment with low cost Xbee radios and Arduino based data logging platforms. To evaluate the promise of this hybrid datalogging concept we developed a new generation of low cost, homemade heat ratio sapflux sensors and tested them at a forested site in the Wasatch Mountains, near Salt Lake City, Utah. We present data from this test site, heat ratio method sensor construction details, and example code that merges the capabilities of Arduino and Campbell Scientific datalogging systems.

MISSE 6 Polymer Film Tensile Experiment

NASA Technical Reports Server (NTRS)

Miller, Sharon K. R.; Dever, Joyce A.; Banks, Bruce A.; Waters, Deborah L.; Sechkar, Edward; Kline, Sara

2010-01-01

The Polymer Film Tensile Experiment (PFTE) was flown as part of Materials International Space Station Experiment 6 (MISSE 6). The purpose of the experiment was to expose a variety of polymer films to the low Earth orbital environment under both relaxed and tension conditions. The polymers selected are those commonly used for spacecraft thermal control and those under consideration for use in spacecraft applications such as sunshields, solar sails, and inflatable and deployable structures. The dog-bone shaped samples of polymers that were flown were exposed on both the side of the MISSE 6 Passive Experiment Container (PEC) that was facing into the ram direction (receiving atomic oxygen, ultraviolet (UV) radiation, ionizing radiation, and thermal cycling) and the wake facing side (which was supposed to have experienced predominantly the same environmental effects except for atomic oxygen which was present due to reorientation of the International Space Station). A few of the tensile samples were coated with vapor deposited aluminum on the back and wired to determine the point in the flight when the tensile sample broke as recorded by a change in voltage that was stored on battery powered data loggers for post flight retrieval and analysis. The data returned on the data loggers was not usable. However, post retrieval observation and analysis of the samples was performed. This paper describes the preliminary analysis and observations of the polymers exposed on the MISSE 6 PFTE.

Lessons Learned on the Presentation of Scan Data.

PubMed

King, David A; Vitkus, Tim

2015-11-01

Technicians performed a radiological survey of a surplus metal tank to support disposition planning at an Oak Ridge, TN, site. The survey included radiation scans to identify contamination and, if identified, define the boundary and magnitude of contamination. Fixed-point 1-min measurements were also collected at randomly selected locations for comparison against the site's free release limit of 5,000 disintegrations per minute per 100 cm (dpm 100 cm) (0.83 Bq cm). Scan data were recorded using a data logger as a means to document surveyor observation-logged data captured at 1-s intervals and converted to counts per minute (cpm) by the data logger software were presented in the project report. Both the qualitative scan data (in cpm) and the quantitative direct measurements (in dpm 100 cm) were reported for completeness, so stakeholders had all available information to support disposition decisions. However, a new stakeholder-introduced to the project at the reporting phase of work-used the instrument efficiency and background data to convert the scan data from cpm to dpm 100 cm, then compared the converted results to the site limit. Many of the converted values exceeded 5,000 dpm 100 cm. This resulted in delays in tank disposition and additional project costs that could have been avoided if the proper use and interpretation of scan data and implications of radon progeny buildup on oxidized metal surfaces had been better communicated.

New York Urban Hydro-Meteorological Testbed (NY-uHMT)

NASA Astrophysics Data System (ADS)

Norouzi, H.; Bah, A.

2017-12-01

It is well known that heat waves kill more persons, on average, than any other extreme weather event in the United States. New York City experiences much adversity due to inclement weather. Exploring climate variation in New Yorker City will help scientists and local government to detect and forecast extreme weather hazards and gather more localized temperature data within the five boroughs. Ground based weather stations are widely used to provide real time data to the public to prevent disasters. The New York urban Hydro-meteorological Testbed (NY-uHMT) is a hydro meteorological network that is used to investigate climate change in the New York City area. It is composed of twenty autonomous weather stations that will gather information on air temperature, relative humidity, rainfall and soil moisture properties around the densely populated NYC area. For each station, the data is stored on a Campbell Scientific CR200x data logger and can be accessed remotely using the LoggerNet software, or by direct connection using an RS-232 cable. Real-time weather data is acquired every fifteen minutes. The data is then periodically sampled and graphed through MATLAB code to be broadcasted on the uHMT website and is available at no charge to the public. We anticipate the results will show that the temperature, humidity, precipitation and soil moisture will vary from location to location depending on the magnitude of urbanization to the area.

Assessing and enhancing the utility of low-cost activity and location sensors for exposure studies.

PubMed

Asimina, Stamatelopoulou; Chapizanis, D; Karakitsios, S; Kontoroupis, P; Asimakopoulos, D N; Maggos, T; Sarigiannis, D

2018-02-20

Nowadays, the advancement of mobile technology in conjunction with the introduction of the concept of exposome has provided new dynamics to the exposure studies. Since the addressing of health outcomes related to environmental stressors is crucial, the improvement of exposure assessment methodology is of paramount importance. Towards this aim, a pilot study was carried out in the two major cities of Greece (Athens, Thessaloniki), investigating the applicability of commercially available fitness monitors and the Moves App for tracking people's location and activities, as well as for predicting the type of the encountered location, using advanced modeling techniques. Within the frame of the study, 21 individuals were using the Fitbit Flex activity tracker, a temperature logger, and the application Moves App on their smartphones. For the validation of the above equipment, participants were also carrying an Actigraph (activity sensor) and a GPS device. The data collected from Fitbit Flex, the temperature logger, and the GPS (speed) were used as input parameters in an Artificial Neural Network (ANN) model for predicting the type of location. Analysis of the data showed that the Moves App tends to underestimate the daily steps counts in comparison with Fitbit Flex and Actigraph, respectively, while Moves App predicted the movement trajectory of an individual with reasonable accuracy, compared to a dedicated GPS. Finally, the encountered location was successfully predicted by the ANN in most of the cases.

Effects of corn straw or mixed forage diet on rumen fermentation parameters of lactating cows using a wireless data logger.

PubMed

Qin, Chunfu; Bu, Dengpan; Sun, Peng; Zhao, Xiaowei; Zhang, Peihua; Wang, Jiaqi

2017-02-01

The objective of this study was to evaluate the effect of two different forage types on rumen fermentation parameters and profiles using a wireless data logger. Eight lactating cows were randomly assigned to one of two dietary treatments with a low forage diet with corn straw (CS) or a high forage diet with mixed forage (MF) as the forage source, respectively. Dietary physically effective neutral detergent fiber (peNDF) content was 11.3% greater in CS. Dry matter intake and milk fatty acid content decreased upon CS (P < 0.05). Ruminal pH, temperature and oxidation reduction potential (ORP) were monitored for 14 weeks. The CS group had significantly higher pH but lower temperature and ORP compared to MF (P < 0.01). With the CS diet regime, pH at the time before morning feeding, rumination and post-ingestion were significantly higher than those in the MF group (P < 0.05). However, times with the ruminal pH below 6.0 and 5.8 were significantly reduced (P < 0.05), whereas ruminal pH below 5.6 tended to be lower (P = 0.07). The results indicated that rumen fermentation parameters were affected by forage types and dietary peNDF content might be predominant in ruminal pH regulation. © 2016 Japanese Society of Animal Science.

Current concepts for quality assured long-distance transport of temperature-sensitive red blood cell concentrates.

PubMed

Klose, T; Borchert, H-H; Pruss, A; Roth, W-K; Bohnen, H R; Putzker, M

2010-07-01

The German Armed Forces Blood Service in Koblenz supplies red blood cell concentrates (RBCs) to military and civilian institutions at home and to field hospitals during peacekeeping operations abroad. During long-distance transport, blood products can be exposed to extreme environmental conditions or inappropriate handling, which may compromise product quality. Different active and passive cooling systems, cooling elements, packaging material and data loggers were examined in a climate chamber. A number of techniques for measuring temperature were investigated in order to preserve the blood products' quality during transport, including some field tests with multiparametric data recording. Any kind of active cooling systems, conventional cooling elements and customary packaging material, as well as temperature-sensitive labels, minimum-maximum thermometers and intra-product measurement were found to be unsuitable for military requirement. The best results were obtained when the passively cooling RCB 25 transport box (Dometic) was used together with latent heat/cold storage elements (deltaT) and Junior data loggers (Escort). The elaborated protocol allows temperatures to be maintained between 2 and 6 degrees C as required by European guidelines for at least 36 h each and between 1 and 10 degrees C as required by German guidelines for at least 48 or 64 h at ambient temperatures between -10 and 40 degrees C. Preliminary results indicate that care must be taken concerning additional factors such as air pressure variation or vibration.

A computerized system to measure and predict air quality for emission control

DOE Office of Scientific and Technical Information (OSTI.GOV)

Crooks, G.; Ciccone, A.; Frattolillo, P.

1997-12-31

A Supplementary Emission Control (SEC) system has been developed on behalf of the Association Industrielle de l`Est de Montreal (AIEM). The objective of the SEC is to avoid exceedences of the Montreal Urban Community (MUC) 24 hour ambient Air Quality Standard (AQS) for sulphur dioxide in the industrial East Montreal area. The SEC system is comprised of: 3 continuous SO{sub 2} monitoring stations with data loggers and remote communications; a meteorological tower with data logger and modem for acquiring local meteorology; communications with Environment Canada to download meteorological forecast data; a polling PC for data retrieval; and Windows NT basedmore » software running on the AIEM computer server. The SEC software utilizes relational databases to store and maintain measured SO{sub 2} concentration data, emission data, as well as observed and forecast meteorological data. The SEC system automatically executes a numerical dispersion model to forecast SO{sub 2} concentrations up to six hours in the future. Based on measured SO{sub 2} concentrations at the monitoring stations and the six hour forecast concentrations, the system determines if local sources should reduce their emission levels to avoid potential exceedences of the AQS. The SEC system also includes a Graphical User Interface (GUI) for user access to the system. The SEC system and software are described, and the accuracy of the system at forecasting SO{sub 2} concentrations is examined.« less

Spatial and temporal variability in the effects of wildfire and drought on thermal habitat for a desert trout

USGS Publications Warehouse

Schultz, Luke; Heck, Michael; Hockman-Wert, David; Allai, T; Wengerd, Seth J.; Cook, NA; Dunham, Jason B.

2017-01-01

We studied how drought and an associated stressor, wildfire, influenced stream flow permanence and thermal regimes in a Great Basin stream network. We quantified these responses by collecting information with a spatially extensive network of data loggers. To understand the effects of wildfire specifically, we used data from 4 additional sites that were installed prior to a 2012 fire that burned nearly the entire watershed. Within the sampled network 73 reaches were classified as perennial, yet only 51 contained surface water during logger installation in 2014. Among the sites with pre-fire temperature data, we observed 2–4 °C increases in maximum daily stream temperature relative to an unburned control in the month following the fire; effects (elevated up to 6.6 °C) appeared to persist for at least one year. When observed August mean temperatures in 2015 (the peak of regionally severe drought) were compared to those predicted by a regional stream temperature model, we observed deviations of −2.1°-3.5°. The model under-predicted and over-predicted August mean by > 1 °C in 54% and 10% of sites, respectively, and deviance from predicted was negatively associated with elevation. Combined drought and post-fire conditions appeared to greatly restrict thermally-suitable habitat for Lahontan cutthroat trout (Oncorhynchus clarkii henshawi).

Comparison of Vertical Soundings and Sidewall Air Temperature Measurements in a Small Alpine Basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Whiteman, Charles D.; Eisenbach, Stefan; Pospichal, Bernhard

2004-11-01

Tethered balloon soundings from two sites on the floor of a 1-km diameter limestone sinkhole in the Eastern Alps are compared with pseudo-vertical temperature ‘soundings’ from three lines of temperature data loggers on the basin’s northwest, southwest and southeast sidewalls. Under stable nighttime conditions with low background winds, the pseudo-vertical profiles from all three lines were good proxies for free air temperature soundings over the basin center, with a mean nighttime cold temperature bias of about 0.4°C and a standard deviation of 0.4°C. Cold biases were highest in the upper basin where relatively warm air subsides to replace air thatmore » spills out of the basin through the lowest altitude saddle. On a windy night, standard deviations increased to 1 - 2°C. After sunrise, the varying exposures of the data loggers to sunlight made the pseudo-vertical profiles less useful as proxies for free air soundings. The good correspondence between sidewall and free air temperatures during high static stability conditions suggests that sidewall soundings will prove useful in monitoring temperatures and vertical temperature gradients in the sinkhole. The sidewall soundings can produce more frequent profiles at less cost than tethersondes or rawinsondes, and provide valuable advantages for some types of meteorological analyses.« less

An inexpensive method for quantifying incubation patterns of open-cup nesting birds, with data for black-throated Blue warblers

USGS Publications Warehouse

Joyce, Elizabeth M.; Sillett, T. Scott; Holmes, Richard T.

2001-01-01

Quantifying incubation patterns has often involved long observation periods in the field, video cameras, or the use of other electronic devices that sometimes require the partial destruction of clutches and insertion of artificial eggs. In this study, we used an inexpensive, nondestructive method involving temperature probes combined with data loggers to examine the incubation rhythm of female Black-throated Blue Warblers (Dendroica caerulescens). The method provided detailed records of on–off patterns for females for selected 24-h periods during incubation. Female warblers spent an average (±SE) of 64.0% of daylight hours incubating in bouts lasting 20.5 ± 1.5 min and made 2.4 ± 0.1 departures from the nest/h on trips that lasted 10.6 ± 0.7 min. Incubation bouts were longer and females spent more time incubating per hour in the mornings and late afternoons than at mid-day. Older females had longer incubation bouts and tended to have shorter incubation periods than did yearling females, suggesting that experienced individuals were more effective incubators. Because of its ease of use and because nests with probes were not depredated at a higher rate than controls, we suggest that the temperature probe/data logger method is an efficient and effective way to quantify incubation rhythms for open-cup nesting birds.

MyPectus: First-in-human pilot study of remote compliance monitoring of teens using dynamic compression bracing to correct pectus carinatum.

PubMed

Harrison, Brittany; Stern, Lily; Chung, Philip; Etemadi, Mozziyar; Kwiat, Dillon; Roy, Shuvo; Harrison, Michael R; Martinez-Ferro, Marcelo

2016-04-01

Patient compliance is a crucial determinant of outcomes in treatments involving medical braces, such as dynamic compression therapy for pectus carinatum (PC). We performed a pilot study to assess a novel, wireless, real-time monitoring system (MyPectus) to address noncompliance. Eight patients (10-16years old) with moderately severe PC deformities underwent bracing. Each patient received a data logger device inserted in the compression brace to sense temperature and pressure. The data were transmitted via Bluetooth 4.0 to an iOS smartphone app, then synced to cloud-based storage, and presented to the clinician on a web-based dashboard. Patients received points for brace usage on the app throughout the 4-week study, and completed a survey to capture patient-reported usage patterns. In all 8 patients, the data logger sensed and recorded data, which connected through all MyPectus system components. There were occasional lapses in data collection because of technical difficulties, such as limited storage capacity. Patients reported positive feedback regarding points. The components of the MyPectus system recorded, stored, and provided data to patients and clinicians. The MyPectus system will inform clinicians about issues related to noncompliance: discrepancy between patient-reported and sensor-reported data regarding brace usage; real-time, actionable information; and patient motivation. Copyright © 2015 Elsevier Inc. All rights reserved.

Network Design and Performance of the System Integration Test, Linked Simulators Phase.

DTIC Science & Technology

1998-01-01

community has primarily used UNIX systems. UNIX is not a real - time operating system and thus very accurate time stamping, i.e., millisecond accuracy, is... time operating system works against us. The clock time on the UNIX workstations drifts from the UTC standard over time and this drift varies from...loggers at each site use the Network Time Protocol to synchronize to the master clock on a workstation in the TCAC. Again, the fact that UNIX is not a real

A practical example aiding understanding momentum in 1D: the water gun experiment

NASA Astrophysics Data System (ADS)

MacLeod, Katarin

2007-09-01

The law of conservation of momentum is one that students often have difficulties understanding. This experiment allows students to use childhood toys to examine and calculate the muzzle velocity of their favourite water gun by using an air track, a spark timer or data logger and the law of conservation of momentum in a one-dimensional case, a modification of the standard ballistic pendulum laboratory experiment (1990 Physics 100 Lab Manual St Francis Xavier University).

Diagnosis and management of blunt pancreatic trauma: a case report with review of the literature.

PubMed

Khan, T F; Zahari, A

1993-06-01

Details of a young logger who sustained a clean prevertebral transection of the pancreas to the left of the superior mesenteric vessels and a crush injury in segments 2 and 3 of the liver are presented. CT scan was not done but ultrasound scan revealed free intraperitoneal fluid and no comment was made about the pancreas. The pancreatic injury was discovered at laparotomy carried out 24 hours after admission and treated by resection.

Data Management of Watershed Information and Data Enterprise Repository Implementation at Fort Hood, Texas

DTIC Science & Technology

2003-03-01

is a 20-ft (6.1-m) mast supporting a cell phone antenna and a solar panel. Contained with in the enclosure is a Forest Technology Systems data...logger, a deep cycle battery, a voltage regulator, a cell phone modem, and a Motorola cell phone . The stream level, turbidity, and soil moisture sensors...DOIM) Security Protocols at Fort Hood, computers connected to the Fort Hood network cannot utilize cell phone communication to retrieve the data

FSA field test

NASA Technical Reports Server (NTRS)

Jaffe, P.; Weaver, R. W.; Lee, R. E.

1981-01-01

The 12 continental remote sites were decommissioned. Testing was consolidated into a five-site network consisting of the four Southern California sites and a new Florida site. 16 kW of new state-of-the-art modules were deployed at the five sites. Testing of the old modules continued at the Goldstone site but as a low-priority item. Array testing of modules is considered. Additional new testing capabilities were added. A battery-powered array data logger is discussed. A final set of failure and degradation data was obtained from the modules.

Exploiting IoT Technologies and Open Source Components for Smart Seismic Network Instrumentation

NASA Astrophysics Data System (ADS)

Germenis, N. G.; Koulamas, C. A.; Foundas, P. N.

2017-12-01

The data collection infrastructure of any seismic network poses a number of requirements and trade-offs related to accuracy, reliability, power autonomy and installation & operational costs. Having the right hardware design at the edge of this infrastructure, embedded software running inside the instruments is the heart of pre-processing and communication services implementation and their integration with the central storage and processing facilities of the seismic network. This work demonstrates the feasibility and benefits of exploiting software components from heterogeneous sources in order to realize a smart seismic data logger, achieving higher reliability, faster integration and less development and testing costs of critical functionality that is in turn responsible for the cost and power efficient operation of the device. The instrument's software builds on top of widely used open source components around the Linux kernel with real-time extensions, the core Debian Linux distribution, the earthworm and seiscomp tooling frameworks, as well as components from the Internet of Things (IoT) world, such as the CoAP and MQTT protocols for the signaling planes, besides the widely used de-facto standards of the application domain at the data plane, such as the SeedLink protocol. By using an innovative integration of features based on lower level GPL components of the seiscomp suite with higher level processing earthworm components, coupled with IoT protocol extensions to the latter, the instrument can implement smart functionality such as network controlled, event triggered data transmission in parallel with edge archiving and on demand, short term historical data retrieval.

Body temperature, thermoregulatory behaviour and pelt characteristics of three colour morphs of springbok (Antidorcas marsupialis).

PubMed

Hetem, Robyn S; de Witt, Brenda A; Fick, Linda G; Fuller, Andrea; Kerley, Graham I H; Meyer, Leith C R; Mitchell, Duncan; Maloney, Shane K

2009-03-01

Using intra-abdominal miniature data loggers, we measured core body temperature in female springbok (Antidorcas marsupialis) of three colour morphs (black, normal and white), free-living in the Karoo, South Africa, for one year. During winter, white springbok displayed lower daily minimum body temperatures (37.4+/-0.5 degrees C), than both black (38.1+/-0.3 degrees C) and normal (38.0+/-0.6 degrees C) springbok. During spring, black springbok displayed higher daily maximum body temperatures (40.7+/-0.1 degrees C) than both white (40.2+/-0.2 degrees C) and normal (40.2+/-0.2 degrees C) springbok. These high maximum body temperatures were associated with larger daily amplitudes of nychthemeral rhythm of body temperature (2.0+/-0.2 degrees C), than that of white (1.6+/-0.1 degrees C) and normal (1.7+/-0.2 degrees C) springbok. Biophysical properties of sample springbok pelts were consistent with these patterns, as the black springbok pelt showed lower reflectance in the visible spectral range, and higher heat load from simulated solar radiation, than did the pelts of the other two springbok. Black springbok had lower diurnal activity in winter, consistent with them having to forage less because their metabolic cost of homeothermy was lower, but were disadvantaged in hot periods. White springbok, by contrast, were more protected from solar heat load, but potentially less able to meet the energy cost of homeothermy in winter. Thus energy considerations may underlie the rarity of the springbok colour morphs.

Characterization of sediment and measurement of groundwater levels and temperatures, Camas National Wildlife Refuge, eastern Idaho

USGS Publications Warehouse

Twining, Brian V.; Rattray, Gordon W.

2016-11-02

The Camas National Wildlife Refuge (Refuge) in eastern Idaho, established in 1937, contains wetlands, ponds, and wet meadows that are essential resting and feeding habitat for migratory birds and nesting habitat for waterfowl. Initially, natural sources of water supported these habitats. However, during the past few decades, climate change and changes in surrounding land use have altered and reduced natural groundwater and surface water inflows such that the wetlands, ponds, and wet meadows are now maintained through water management and groundwater pumping. These water management activities have proven to be inefficient and costly, prompting the Refuge to develop alternative water management options that are more efficient and less expensive. The U.S. Geological Survey, in cooperation with the U.S. Fish and Wildlife Service, is studying the hydrogeology at the Refuge to provide information for developing alternative water management options.The hydrogeologic studies at the Refuge included characterizing the type, distribution, and hydraulic conductivity of surficial sediments and measuring water levels and temperatures in monitoring wells. Four monitoring wells and seven soil probe coreholes were drilled at the Refuge. Seven water level and temperature data loggers were installed in the wells and water levels and temperatures were continuously recorded from November 2014 to June 2016. Sediment cores were collected from the coreholes and sediment type and distribution were characterized from drillers’ notes, geophysical logs, corehole samples, and particle grain-size analysis. The hydraulic conductivities of sediments were estimated using the measured average grain size and the assumed textural maturity of the sediment, and ranged from about 20 to 290 feet per day.

Locally Motivated GLOBE Investigations - A Key to Success

NASA Astrophysics Data System (ADS)

Washburne, J. C.; Geery, W.

2003-12-01

The GLOBE program was set up to help students make a core set of environmental observations at or near their schools, report their data through the internet to share with other students and scientists, analyze their data both locally and globally, and use this knowledge to form a better understanding of their environment. While the GLOBE program has been successful promoting more meaningful data collection, many of the tools and much of the infrastructure available to schools to synthesize their observations are underused. Schools that integrate GLOBE protocols with locally motivated investigations are more likely to implement the higher-order analysis and synthesis components of the program. Indicators of a successful observational program are things like measurement persistence, high data quality, and regular data. Participation in community forums and student-based research projects are evidence of a successful integrated program. A locally motivated issue allows a school to mold their GLOBE investigations around a multi-faceted question that they have first-hand knowledge of, that is both relevant and engaging to their students, and that can be supported by local expertise. In contrast, many GLOBE investigations are designed around abstract, non-site specific, narrowly focused and externally analyzed questions that limit local involvement and motivation. The main focus of this presentation is a few case histories of successful local investigations that incorporated GLOBE soil and air temperature data-logger measurements. The main example is drawn from Mr. Geery's fifth grade class investigation of why temperature differences exist between a local river bottom area and the school, which is located several kilometers away and 100 meters higher.

Three-dimensional foraging habitat use and niche partitioning in two sympatric seabird species, Phalacrocorax auritus and P. penicillatus

USGS Publications Warehouse

Peck-Richardson, Adam G.; Lyons, Donald E.; Roby, Daniel D.; Cushing, Daniel A.; Lerczak, James A.

2018-01-01

Ecological theory predicts that co-existing, morphologically similar species will partition prey resources when faced with resource limitations. We investigated local movements, foraging dive behavior, and foraging habitat selection by breeding adults of 2 closely related cormorant species, double-crested cormorants Phalacrocorax auritus and Brandt’s cormorants P. penicillatus. These species nest sympatrically at East Sand Island in the Columbia River estuary at the border of Oregon and Washington states, USA. Breeding individuals of each species were tracked using GPS tags with integrated temperature and depth data-loggers. The overall foraging areas and core foraging areas (defined as the 95% and 50% kernel density estimates of dive locations, respectively) of double-crested cormorants were much larger and covered a broader range of riverine, mixed-estuarine, and nearshore marine habitats. Brandt’s cormorant foraging areas were less expansive, were exclusively marine, and mostly overlapped with double-crested cormorant foraging areas. Within these areas of overlap, Brandt’s cormorants tended to dive deeper (median depth = 6.48 m) than double-crested cormorants (median depth = 2.67 m), and selected dive locations where the water was deeper. Brandt’s cormorants also utilized a deeper, more benthic portion of the water column than did double-crested cormorants. Nevertheless, the substantial overlap in foraging habitat between the 2 cormorant species in the Columbia River estuary, particularly for Brandt’s cormorants, suggests that superabundant prey resources allow these 2 large and productive cormorant colonies to coexist on a single island near the mouth of the Columbia River.

MscS-Like Mechanosensitive Channels in Plants and Microbes

PubMed Central

Wilson, Margaret E.; Maksaev, Grigory; Haswell, Elizabeth S.

2013-01-01

The challenge of osmotic stress is something all living organisms must face as a result of environmental dynamics. Over the past three decades, innovative research and cooperation across disciplines has irrefutably established that cells utilize mechanically gated ion channels to release osmolytes and prevent cell lysis during hypoosmotic stress. Early electrophysiological analysis of the inner membrane of Escherichia coli identified the presence of three distinct mechanosensitive activities. The subsequent discoveries of the genes responsible for two of these activities, the mechanosensitive channels of large (MscL) and small (MscS) conductance, led to the identification of two diverse families of mechanosensitive channels. The latter of these two families, the MscS family, is made up of members from bacteria, archaea, fungi, and plants. Genetic and electrophysiological analysis of these family members has provided insight into how organisms use mechanosensitive channels for osmotic regulation in response to changing environmental and developmental circumstances. Furthermore, solving the crystal structure of E. coli MscS and several homologs in several conformational states has contributed to the understanding of the gating mechanisms of these channels. Here we summarize our current knowledge of MscS homologs from all three domains of life, and address their structure, proposed physiological functions, electrophysiological behaviors, and topological diversity. PMID:23947546

Computational Prediction of Atomic Structures of Helical Membrane Proteins Aided by EM Maps

PubMed Central

Kovacs, Julio A.; Yeager, Mark; Abagyan, Ruben

2007-01-01

Integral membrane proteins pose a major challenge for protein-structure prediction because only ≈100 high-resolution structures are available currently, thereby impeding the development of rules or empirical potentials to predict the packing of transmembrane α-helices. However, when an intermediate-resolution electron microscopy (EM) map is available, it can be used to provide restraints which, in combination with a suitable computational protocol, make structure prediction feasible. In this work we present such a protocol, which proceeds in three stages: 1), generation of an ensemble of α-helices by flexible fitting into each of the density rods in the low-resolution EM map, spanning a range of rotational angles around the main helical axes and translational shifts along the density rods; 2), fast optimization of side chains and scoring of the resulting conformations; and 3), refinement of the lowest-scoring conformations with internal coordinate mechanics, by optimizing the van der Waals, electrostatics, hydrogen bonding, torsional, and solvation energy contributions. In addition, our method implements a penalty term through a so-called tethering map, derived from the EM map, which restrains the positions of the α-helices. The protocol was validated on three test cases: GpA, KcsA, and MscL. PMID:17496035

Paleogeography and paleoenvironments of southwestern Baffin Island (Nunavut, Canada): post-glacial isostatic uplift and isolation of Nettilling Lake from marine influence

NASA Astrophysics Data System (ADS)

Narancic, Biljana; Pienitz, Reinhard; Francus, Pierre; Rolland, Nicolas; Wagner, Anne-Marie

2013-04-01

Although signs of recent climate change are more compelling in circumpolar regions, we have limited knowledge of Arctic climates and environments and their past variability. In order to better understand and anticipate the extent and nature of future changes in the Arctic, it is necessary to increase our capacity to model past environmental changes. Instrumental monitoring using high technology in polar regions has been implemented only over recent decades (Pienitz et al., 2004). Hence, to extend in time the climate record, we use a multi-proxy paleolimnological approach to study the sedimentary records preserved in Nettilling Lake located on Baffin Island the largest lake in the Canadian Arctic Archipelago. Nettilling Lake has an area of 5.541 km2 and a maximum depth of 65 m (Oliver, 1964). Its basin has undergone postglacial marine invasion following the last deglaciation due to isostatic subsidence exerted by the Laurentide Ice Sheet. The glacio-isostatic uplift of the region resulted in the establishment of a freshwater lake around 5000 years BP (Jacobs et al., 1997). Nettilling Lake remains a scientific frontier for researchers, mainly due to the inaccessibility of the area and the lack of available data. To date, only one exploratory study by Oliver (1964) has focused on the limnological conditions and bathymetry of the lake, and our research aims at providing deeper insights into the history of paleoenvironmental changes in this remote Arctic region. Biostratigraphical and geochemical analyses were completed on two sediment cores, one from a lagoonal system in the northwestern part of Nettilling Lake and another from the eastern part of the Lake. The sediment cores from the lagoonal system clearly document the marine-lacustrine transition through shifts in paleosalinity inferred from the composition of fossil diatom assemblages. Fossil chironomid larvae first appeared in the record after basin isolation and the establishment of freshwater conditions. Precise radiometric dating of the isolation contacts helps refine regional glacio-isostatic rebound and the duration and extent of the postglacial Tyrrell Sea marine phase. Post-glacial marine regression and the associated changes in paleosalinity are also reflected in the sediment core sedimentology and geochemistry analysed using a Multi Sensor Core Logger and a microfluorescence scanner. Jacobs J. D., Headley A. N., Maus L. A., Mode W. N. et Simms E. L., 1997. Climate and vegetation of the interior lowlands of southern Baffin Island : long-term stability at the low artic limit. Arctic 50 (2) : 167-177. Oliver D. R., 1964. A limnological investigation of a large Arctic lake, Nettilling lake, Baffin island. Papers University of Calgary 17 : 69-83. Pienitz R., Douglas M. S. V. et Smol P. J., 2004 Paleolimnological research in polar regions : An introduction. In : Pienitz R., Douglas M. S. V., Smol P. J. (Eds) Long- term environmental change in Arctic and Antarctic lakes. Springer, Dordrecht, 562 p.

Role of the wireless thermologger system in the management of the autoclave unequipped with sensor ports.

PubMed

Uetera, Yushi; Shigematsu, Hiroshi; Baba, Zenzou; Kumada, Naohito; Kawamura, Kunio

2003-01-01

Recently, the wireless thermologger system was developed. It consists of a wireless logger and the attached computer system. The wireless logger has a wireless structure and can be placed anywhere in the sterilizer chamber for thermometry. In the present study, thermal evaluations were performed twice using the wireless thermologger system in the sterilizer chamber of the prevacuum autoclave unequipped with sensor ports when it failed to pass the Bowie-Dick test and underwent mechanical repairs. Thermometry was performed when the Bowie-Dick test cycle was operated. The heat up time was measured in the range of 120.0-134.0 degrees C. The F0 value was calculated with the reference temperature at 121.0 degrees C and Z value at 10 degrees C when the sterilization temperature was over 120.0 degrees C. The first thermal evaluation was performed after three air-leaking points were repaired along with the replacement of the vacuum pump and the thermosensor. It revealed that the heat-up time was 4 min and 42 s and the F0 value was 137.5. After the temperature control systems were adjusted using the process calibrator in the prevacuum autoclave, the second thermal evaluation revealed that the heat up time was 2 mins 1 s and the F0 value was 102.7. The present study suggests that the wireless thermologger system is useful in the management of the autoclave unequipped with sensor ports when it undergoes mechanical repairs.

Local-scale spatial modelling for interpolating climatic temperature variables to predict agricultural plant suitability

NASA Astrophysics Data System (ADS)

Webb, Mathew A.; Hall, Andrew; Kidd, Darren; Minansy, Budiman

2016-05-01

Assessment of local spatial climatic variability is important in the planning of planting locations for horticultural crops. This study investigated three regression-based calibration methods (i.e. traditional versus two optimized methods) to relate short-term 12-month data series from 170 temperature loggers and 4 weather station sites with data series from nearby long-term Australian Bureau of Meteorology climate stations. The techniques trialled to interpolate climatic temperature variables, such as frost risk, growing degree days (GDDs) and chill hours, were regression kriging (RK), regression trees (RTs) and random forests (RFs). All three calibration methods produced accurate results, with the RK-based calibration method delivering the most accurate validation measures: coefficients of determination ( R 2) of 0.92, 0.97 and 0.95 and root-mean-square errors of 1.30, 0.80 and 1.31 °C, for daily minimum, daily maximum and hourly temperatures, respectively. Compared with the traditional method of calibration using direct linear regression between short-term and long-term stations, the RK-based calibration method improved R 2 and reduced root-mean-square error (RMSE) by at least 5 % and 0.47 °C for daily minimum temperature, 1 % and 0.23 °C for daily maximum temperature and 3 % and 0.33 °C for hourly temperature. Spatial modelling indicated insignificant differences between the interpolation methods, with the RK technique tending to be the slightly better method due to the high degree of spatial autocorrelation between logger sites.

Behavioural mapping of a pelagic seabird: combining multiple sensors and a hidden Markov model reveals the distribution of at-sea behaviour

PubMed Central

Dean, Ben; Freeman, Robin; Kirk, Holly; Leonard, Kerry; Phillips, Richard A.; Perrins, Chris M.; Guilford, Tim

2013-01-01

The use of miniature data loggers is rapidly increasing our understanding of the movements and habitat preferences of pelagic seabirds. However, objectively interpreting behavioural information from the large volumes of highly detailed data collected by such devices can be challenging. We combined three biologging technologies—global positioning system (GPS), saltwater immersion and time–depth recorders—to build a detailed picture of the at-sea behaviour of the Manx shearwater (Puffinus puffinus) during the breeding season. We used a hidden Markov model to explore discrete states within the combined GPS and immersion data, and found that behaviour could be organized into three principal activities representing (i) sustained direct flight, (ii) sitting on the sea surface, and (iii) foraging, comprising tortuous flight interspersed with periods of immersion. The additional logger data verified that the foraging activity corresponded well to the occurrence of diving. Applying this approach to a large tracking dataset revealed that birds from two different colonies foraged in local waters that were exclusive, but overlapped in one key area: the Irish Sea Front (ISF). We show that the allocation of time to each activity differed between colonies, with birds breeding furthest from the ISF spending the greatest proportion of time engaged in direct flight and the smallest proportion of time engaged in foraging activity. This type of analysis has considerable potential for application in future biologging studies and in other taxa. PMID:23034356

Who Wants to Save the Forest? Characterizing Community-Led Monitoring in Prey Lang, Cambodia

NASA Astrophysics Data System (ADS)

Turreira-García, Nerea; Meilby, Henrik; Brofeldt, Søren; Argyriou, Dimitris; Theilade, Ida

2018-06-01

Community monitoring is believed to be successful only where there is sustained funding, legislation for communities to enforce rules, clear tenure rights, and an enabling environment created by the state. Against this backdrop, we present the case of an autonomous grassroots-monitoring network that took the initiative to protect their forest, in a context, where no external incentives and rule enforcement power were provided. The aim was to analyze the socio-demographic and economic backgrounds, motivations and achievements of forest monitors, compared to non-monitors in the same communities. A total of 137 interviews were conducted in four villages bordering Prey Lang forest in Cambodia. We used binary logit models to identify the factors that influenced the likelihood of being a monitor. Results show that there were few (22%, n = 30) active monitors. Active monitors were intrinsically motivated forest-users, and not specifically associated with a particular gender, ethnicity, or residence-time in that area. The most common interventions were with illegal loggers, and the monitors had a general feeling of success in stopping the illegal activities. Most (73%, n = 22) of them had been threatened by higher authorities and loggers. Our results show that despite the lack of power to enforce rules, absence of external funding and land-ownership rights, and enduring threats of violence and conflicts, autonomous community monitoring may take place when community members are sufficiently motivated by the risk of losing their resources.

Pelagic seabird flight patterns are consistent with a reliance on olfactory maps for oceanic navigation

PubMed Central

Reynolds, Andrew M.; Cecere, Jacopo G.; Paiva, Vitor H.; Ramos, Jaime A.; Focardi, Stefano

2015-01-01

Homing studies have provided tantalizing evidence that the remarkable ability of shearwaters (Procellariiformes) to pinpoint their breeding colony after crossing vast expanses of featureless open ocean can be attributed to their assembling cognitive maps of wind-borne odours but crucially, it has not been tested whether olfactory cues are actually used as a system for navigation. Obtaining statistically important samples of wild birds for use in experimental approaches is, however, impossible because of invasive sensory manipulation. Using an innovative non-invasive approach, we provide strong evidence that shearwaters rely on olfactory cues for oceanic navigation. We tested for compliance with olfactory-cued navigation in the flight patterns of 210 shearwaters of three species (Cory's shearwaters, Calonectris borealis, North Atlantic Ocean, Scopoli's shearwaters, C. diomedea Mediterranean Sea, and Cape Verde shearwaters, C. edwardsii, Central Atlantic Ocean) tagged with high-resolution GPS loggers during both incubation and chick rearing. We found that most (69%) birds displayed exponentially truncated scale-free (Lévy-flight like) displacements, which we show are consistent with olfactory-cued navigation in the presence of atmospheric turbulence. Our analysis provides the strongest evidence yet for cognitive odour map navigation in wild birds. Thus, we may reconcile two highly disputed questions in movement ecology, by mechanistically connecting Lévy displacements and olfactory navigation. Our approach can be applied to any species which can be tracked at sufficient spatial resolution, using a GPS logger. PMID:26136443

Adaptive capacity at the northern front: sockeye salmon behaviourally thermoregulate during novel exposure to warm temperatures

PubMed Central

Armstrong, Jonathan B.; Ward, Eric J.; Schindler, Daniel E.; Lisi, Peter J.

2016-01-01

As climate change increases maximal water temperatures, behavioural thermoregulation may be crucial for the persistence of coldwater fishes, such as salmonids. Although myriad studies have documented behavioural thermoregulation in southern populations of salmonids, few if any have explored this phenomenon in northern populations, which are less likely to have an evolutionary history of heat stress, yet are predicted to experience substantial warming. Here, we treated a rare heat wave as a natural experiment to test whether wild sockeye salmon (Oncorhynchus nerka) at the northern extent of their primary range (60° latitude) can thermoregulate in response to abnormally high thermal conditions. We tagged adult sockeye salmon with temperature loggers as they staged in a lake epilimnion prior to spawning in small cold streams (n = 40 recovered loggers). As lake surface temperatures warmed to physiologically suboptimal levels (15–20°C), sockeye salmon thermoregulated by moving to tributary plumes or the lake metalimnion. A regression of fish body temperature against lake surface temperature indicated that fish moved to cooler waters when the epilimnion temperature exceeded ~12°C. A bioenergetics model suggested that the observed behaviour reduced daily metabolic costs by as much as ~50% during the warmest conditions (18–20°C). These results provide rare evidence of cool-seeking thermoregulation at the poleward extent of a species range, emphasizing the potential ubiquity of maximal temperature constraints and the functional significance of thermal heterogeneity for buffering poikilotherms from climate change. PMID:27729980

The ALICE DAQ infoLogger

NASA Astrophysics Data System (ADS)

Chapeland, S.; Carena, F.; Carena, W.; Chibante Barroso, V.; Costa, F.; Dénes, E.; Divià, R.; Fuchs, U.; Grigore, A.; Ionita, C.; Delort, C.; Simonetti, G.; Soós, C.; Telesca, A.; Vande Vyvre, P.; Von Haller, B.; Alice Collaboration

2014-04-01

ALICE (A Large Ion Collider Experiment) is a heavy-ion experiment studying the physics of strongly interacting matter and the quark-gluon plasma at the CERN LHC (Large Hadron Collider). The ALICE DAQ (Data Acquisition System) is based on a large farm of commodity hardware consisting of more than 600 devices (Linux PCs, storage, network switches). The DAQ reads the data transferred from the detectors through 500 dedicated optical links at an aggregated and sustained rate of up to 10 Gigabytes per second and stores at up to 2.5 Gigabytes per second. The infoLogger is the log system which collects centrally the messages issued by the thousands of processes running on the DAQ machines. It allows to report errors on the fly, and to keep a trace of runtime execution for later investigation. More than 500000 messages are stored every day in a MySQL database, in a structured table keeping track for each message of 16 indexing fields (e.g. time, host, user, ...). The total amount of logs for 2012 exceeds 75GB of data and 150 million rows. We present in this paper the architecture and implementation of this distributed logging system, consisting of a client programming API, local data collector processes, a central server, and interactive human interfaces. We review the operational experience during the 2012 run, in particular the actions taken to ensure shifters receive manageable and relevant content from the main log stream. Finally, we present the performance of this log system, and future evolutions.

Evaluating wildlife-cattle contact rates to improve the understanding of dynamics of bovine tuberculosis transmission in Michigan, USA.

PubMed

Lavelle, Michael J; Kay, Shannon L; Pepin, Kim M; Grear, Daniel A; Campa, Henry; VerCauteren, Kurt C

2016-12-01

Direct and indirect contacts among individuals drive transmission of infectious disease. When multiple interacting species are susceptible to the same pathogen, risk assessment must include all potential host species. Bovine tuberculosis (bTB) is an example of a disease that can be transmitted among several wildlife species and to cattle, although the potential role of several wildlife species in spillback to cattle remains unclear. To better understand the complex network of contacts and factors driving disease transmission, we fitted proximity logger collars to beef and dairy cattle (n=37), white-tailed deer (Odocoileus virginianus; n=29), raccoon (Procyon lotor; n=53), and Virginia opossum (Didelphis virginiana; n=79) for 16 months in Michigan's Lower Peninsula, USA. We determined inter- and intra-species direct and indirect contact rates. Data on indirect contact was calculated when collared animals visited stationary proximity loggers placed at cattle feed and water resources. Most contact between wildlife species and cattle was indirect, with the highest contact rates occurring between raccoons and cattle during summer and fall. Nearly all visits (>99%) to cattle feed and water sources were by cattle, whereas visitation to stored cattle feed was dominated by deer and raccoon (46% and 38%, respectively). Our results suggest that indirect contact resulting from wildlife species visiting cattle-related resources could pose a risk of disease transmission to cattle and deserves continued attention with active mitigation. Published by Elsevier B.V.

Lessons learned on the presentation of scan data

DOE Office of Scientific and Technical Information (OSTI.GOV)

King, David A.; Vitkus, Tim

Technicians performed a radiological survey of a surplus metal tank to support disposition planning at an Oak Ridge, Tennessee site. The survey included radiation scans to identify contamination and, if identified, define the boundary and magnitude of contamination. Fixed-point 1-minute measurements were also collected at randomly selected locations for comparison against the site's free release limit of 5,000 disintegrations per minute per 100 cm² (dpm/100 cm²) (0.83 Bq/cm²). Scan data were recorded using a data logger as a means to document surveyor observation - logged data captured at 1-second intervals and converted to counts per minute (cpm) by the datamore » logger software were presented in the project report. Both the qualitative scan data (in cpm) and the quantitative direct measurement (in dpm/100 cm²) were reported for completeness, so stakeholders had all available information to support disposition decisions. However, a new stakeholder - introduced to the project at the reporting phase of work - used the instrument efficiency and background data to convert the scan data from cpm to dpm/100 cm², then compared the converted results to the site limit. Many of the converted values exceeded 5,000 dpm/100 cm². This resulted in delays in tank disposition and additional project costs which could have been avoided if the proper use and interpretation of scan data, and implications of radon progeny buildup on oxidized metal surfaces, had been better communicated.« less

Unmanned Aerial System Aids Dry-season Stream Temperature Sensing

NASA Astrophysics Data System (ADS)

Chung, M.; Detweiler, C.; Higgins, J.; Ore, J. P.; Dralle, D.; Thompson, S. E.

2016-12-01

In freshwater ecosystems, temperature affects biogeochemistry and ecology, and is thus a primary physical determinant of habitat quality. Measuring temperatures in spatially heterogeneous water bodies poses a serious challenge to researchers due to constraints associated with currently available methods: in situ loggers record temporally continuous temperature measurements but are limited to discrete spatial locations, while distributed temperature and remote sensing provide fine-resolution spatial measurements that are restricted to only two-dimensions (i.e. streambed and surface, respectively). Using a commercially available quadcopter equipped with a 6m cable and temperature-pressure sensor system, we measured stream temperatures at two confluences at the South Fork Eel River, where cold water inputs from the tributary to the mainstem create thermal refugia for juvenile salmonids during the dry season. As a mobile sensing platform, unmanned aerial systems (UAS) can facilitate quick and repeated sampling with minimal disturbance to the ecosystem, and their datasets can be interpolated to create a three-dimensional thermal map of a water body. The UAS-derived data was compared to data from in situ data loggers to evaluate whether the UAS is better able to capture fine-scale temperature dynamics at each confluence. The UAS has inherent limitations defined by battery life and flight times, as well as operational constraints related to maneuverability under wind and streamflow conditions. However, the platform is able to serve as an additional field tool for researchers to capture complex thermal structures in water bodies.

GPS tracking devices reveal foraging strategies of black-legged kittiwakes

USGS Publications Warehouse

Kotzerka, Jana; Garthe, Stefan; Hatch, Scott A.

2010-01-01

The Black-legged Kittiwake Rissa tridactyla is the most abundant gull species in the world, but some populations have declined in recent years, apparently due to food shortage. Kittiwakes are surface feeders and thus can compensate for low food availability only by increasing their foraging range and/or devoting more time to foraging. The species is widely studied in many respects, but long-distance foraging and the limitations of conventional radio telemetry have kept its foraging behavior largely out of view. The development of Global Positioning System (GPS) loggers is advancing rapidly. With devices as small as 8 g now available, it is possible to use this technology for tracking relatively small species of oceanic birds like kittiwakes. Here we present the first results of GPS telemetry applied to Black-legged Kittiwakes in 2007 in the North Pacific. All but one individual foraged in the neritic zone north of the island. Three birds performed foraging trips only close to the colony (within 13 km), while six birds had foraging ranges averaging about 40 km. The maximum foraging range was 59 km, and the maximum distance traveled was 165 km. Maximum trip duration was 17 h (mean 8 h). An apparently bimodal distribution of foraging ranges affords new insight on the variable foraging behaviour of Black-legged Kittiwakes. Our successful deployment of GPS loggers on kittiwakes holds much promise for telemetry studies on many other bird species of similar size and provides an incentive for applying this new approach in future studies.

Incidence of MSDs and neck and back pain among logging machine operators in the southern U.S.

PubMed

Lynch, S M; Smidt, M F; Merrill, P D; Sesek, R F

2014-07-01

There are limited data about the incidence and prevalence of musculoskeletal disorders (MSDs) among loggers in the southern U.S. despite the risk factors associated with these occupations. Risk factors are both personal (age, body mass index, etc.) and job-related (awkward postures, repetitive hand and foot movements, vibration, etc.). A survey was conducted to estimate the incidence of self-reported pain and diagnosed MSDs and to study the relationship with known risk factors. Respondents were loggers attending training and continuing education classes. Respondents were asked to identify personal attributes, machine use, awkward postures, repetitive movements, and recent incidence of pain and medical diagnoses. All were male with an average age of 44 (range of 19-67) and an average body mass index of 31.3. Most were machine operators (97%) who have worked in the logging industry for an average of 22.9 years. Most machines identified were manufactured within the past ten years (average machine age 6.7 years). For machine operators, 10.5% (16) reported an MSD diagnosis, 74.3% (113) reported at least mild back pain, and 71.7% (109) reported at least mild neck pain over the past year. Further analysis attempted to identify an association between personal attributes, machine use, posture, and pain. Risk factors related to machine use may be biased since most survey respondents had considerable choice or control in working conditions, as they were firm owners and/or supervisors.

Temperature estimation for the most upper part of magmatic chamber of the Elbrus volcano

NASA Astrophysics Data System (ADS)

Likhodeev, Dmitry

2013-04-01

The results of theoretical and experimental studies on thermal processes in the Elbrus volcanic center and adjacent territories are presented. Distributed temperature measurements on the Elbrus volcano and near the Maloye Azau glacier by means of temperature data loggers («High Capacity Temperature Loggers iButton» and «Rejim-avtomat-termo-10-100») have been performed. The comparative time series analysis is provided. On the basis of the Geophysical Observatory in Northern Caucasus, in the laboratory located some 20 km from the Elbrus volcano in the tunnel at a depth of 4 km the array of temperature sensors has been deployed. Results of continuous observations over variations of underground temperatures, including pin-point measurements in the vicinity of sources of carbonaceous mineral waters are presented and discussed. Temperature estimations for the most upper part of the shallow magmatic chamber of the of the Elbrus volcano were obtained on the basis of experimental measurements in the 180-meter deep borehole drilled through the glacier on the western plateau of Mount Elbrus. The estimations of deep temperatures have confirmed the possibility of existence of the magmatic chamber at depths of 0-1 km below sea level. At the same time the magnitudes of local heat flux were identified with enhanced precision. Thus, the original scientific results provide significant extension to our knowledge on possible resumption of volcanic activity in the vicinity of Mount Elbrus.

Lessons learned on the presentation of scan data

DOE PAGES

King, David A.; Vitkus, Tim

2015-11-01

Technicians performed a radiological survey of a surplus metal tank to support disposition planning at an Oak Ridge, Tennessee site. The survey included radiation scans to identify contamination and, if identified, define the boundary and magnitude of contamination. Fixed-point 1-minute measurements were also collected at randomly selected locations for comparison against the site's free release limit of 5,000 disintegrations per minute per 100 cm² (dpm/100 cm²) (0.83 Bq/cm²). Scan data were recorded using a data logger as a means to document surveyor observation - logged data captured at 1-second intervals and converted to counts per minute (cpm) by the datamore » logger software were presented in the project report. Both the qualitative scan data (in cpm) and the quantitative direct measurement (in dpm/100 cm²) were reported for completeness, so stakeholders had all available information to support disposition decisions. However, a new stakeholder - introduced to the project at the reporting phase of work - used the instrument efficiency and background data to convert the scan data from cpm to dpm/100 cm², then compared the converted results to the site limit. Many of the converted values exceeded 5,000 dpm/100 cm². This resulted in delays in tank disposition and additional project costs which could have been avoided if the proper use and interpretation of scan data, and implications of radon progeny buildup on oxidized metal surfaces, had been better communicated.« less

HYDROBS: a long-term autonomous mooring for passive acoustic monitoring

NASA Astrophysics Data System (ADS)

Hello, Y.; Royer, J. Y.; Yegikyan, M.

2017-12-01

Passive acoustics proves an effective way for monitoring the low-level seismic activity of the ocean floor and low-frequency sounds from the ocean (baleen whales, sea-state, icebergs). Networks of synchronized autonomous hydrophones have thus been commonly deployed in the world ocean to monitor large sections of mid-oceanic ridges. HYDROBS is an improved system that meet two requirements: an easy access to the data collected by the instruments together with long-term deployments - up to 4 consecutive years - reducing the need of large vessels capable of yearly mooring operations in open seas. The system has two components: a data logger, up-to-date but similar to previous systems, and three messengers, releasable on demand to collect the data. The mooring line itself is classical, with an expandable weight at the sea-bottom to maintain the mooring, an acoustic release to free the mooring line for recovery, a line adjustable to the seafloor depth, and an immerged buoy, holding the acquisition system, to maintain the sensors at a constant depth and to bring the mooring line to the surface for its recovery. The data logger is based on a low-power microprocessor, an A/D-32bit convertor sampling at 250Hz, a 10-8 real time clock and SD card storage. Lithium batteries provide 3-4 years of autonomy. Acoustic communications with the surface-ship provide control over all functionalities at deployment and a health bulletin on demand. The 3 shuttles, encapsulated in 13" glass spheres, use the same CPU board and clock as the main station. Data transfer from the data logger to the shuttles is wireless (1Mbit/s digital inductive through water). Data are duplicated once per day on shuttles N and N+1 for redundancy. Prior to their release by acoustic command, the shuttles are synchronized with the master clock. At sea-surface, shuttles (as the main unit) look for GPS time and calculate their clock drift. So, the master clock drift can be monitored over time at every shuttle release until its final recovery. Shuttles and main unit are located on the sea-surface by AIS. Iridium communications can also be set to warn the user of a false release. A non-specialist can thus easily handle a shuttle recovery from a ship of opportunity. With 4-channels, this system is also suitable to monitor other parameters in the water column, continuously and over long periods.

Seasonal frost conditions in different periglacial landforms in the Eastern Pyrenees from 2003 to 2015

NASA Astrophysics Data System (ADS)

Salvador-Franch, Ferran; Salvà-Catarineu, Montserrat; Oliva, Marc; Gómez-Ortiz, Antonio

2016-04-01

Glaciers shaped the headwaters and valley floors in the Eastern Pyrenees during the Last Glaciation at elevations above 2100-2200 m. Since the deglaciation of these areas, periglacial processes have generated a wide range of periglacial landforms, such as rock glaciers, patterned ground and debris slopes. The role of soil temperatures is decisive for the degree of activity of periglacial processes: cryoturbation, solifluction, frost weathering, etc. Nowadays, periglacial processes in the Eastern Pyrenees are driven by a seasonal frozen layer extending 5-7 months. In general, at 2100 m the seasonal frost reaches 20 cm depth, while at 2700 m reaches 50 cm depth. However, soil temperatures, and thus, periglacial processes are strongly controlled by the large interannual variability of the snow cover. With the purpose of understanding the rhythm and intensity of soil freezing/thawing in 2003 we set up several monitoring sites along a vertical transect from the valley floors (1100 m) to the high plateaus (2700 m) across the southern slope of the Puigpedrós massif (2914 m), in the Eastern Pyrenees. The monitoring of soil temperatures has been conducted from 2003 to 2015 in different periglacial landforms using UTL and Hobo loggers. These loggers were installed at depths of 5, 20 and 50 cm at five sites: Calmquerdós (2730 m), Malniu (2230 m), La Feixa (2150 m), Meranges (1600 m) and Das (1097 m). Air temperatures used as reference come from two automatic stations of the Catalan Meteorological Survey in Malniu and Das, and with two loggers installed in La Feixa and Meranges. No permafrost regime was detected in none of the sites. Data shows evidence of the control of snow cover on the depth of the frozen layer and on the number of freeze-thaw cycles. Air temperatures at 2000-2200 m show a mean of 150 freeze-thaw cycles per year. In La Feixa, with very thin snow cover, only 67 cycles are recorded at 5 cm depth and 5 cycles at 50 cm depth. In Malniu, located at a higher elevation showing a thicker and longer snow cover, only 17 freeze-thaw cycles per year are recorded at 5 cm depth, with no cycles recorded at 50 cm depth. Soils remain unfrozen during years with a very thick snow cover. The snow cover is also largely conditioned by the microtopography and exposure to the dominant winds. These factors condition the distribution, duration and intensity of the frozen ground and, thus, determine the intensity of periglacial processes in these areas.

Ground thermal conditions along a vertical transect with contrasted topography in a high mountain Mediterranean environment (Puigpedrós massif, eastern Pyrenees), from 2003 to 2014

NASA Astrophysics Data System (ADS)

Salvador-Franch, Ferran; Salvà-Catarineu, Montserrat; Oliva, Marc; Gómez-Ortiz, Antonio

2015-04-01

During the Last Glaciation glaciers shaped the headwaters and valley floors in the Eastern Pyrenees above 2100-2200 m. Since the deglaciation of these high mountain environments, periglacial processes have generated rock glaciers, patterned ground and debris slopes. The role of soil temperatures is decisive regarding the contemporary activity of several processes: cryoturbation, solifluction, frost weathering, etc. Nowadays, periglacial processes are driven by a seasonal frozen layer extending 4-5 months. At 2100 m the seasonal frost reaches 20 cm depth, while at 2700 m reaches 50 cm depth. However, soil temperatures, and thus, periglacial processes are strongly controlled by the large interannual variability of the snow cover. With the purpose of understanding the rhythm and intensity of soil freezing/thawing we have set up several monitoring sites along a vertical transect from the high plateaus (2700 m) to the valley floors (1100 m) across the southern slope of the Puigpedrós massif (2914 m), in the Eastern Pyrenees. The monitoring of soil temperatures extends from 2003 to 2014. TinyTalk, UTL and Hobo loggers have been used in this study. These loggers were installed at depths of -5, -20 and -50 cm at five sites: Calmquerdós (2730 m), Malniu (2230 m), La Feixa (2150 m), Meranges (1600 m) and Das (1097 m). Air temperatures used as reference come from two automatic stations of the Catalan Meteorological Survey (Malniu, Das) as well as from two loggers installed in La Feixa and Meranges. Data shows the control of snow cover on the depth of the frozen layer and on the number of freeze-thaw cycles. Air temperatures at 2000-2200 m show a mean of 150 freeze-thaw cycles per year. In La Feixa, with very thin snow cover, only 67 cycles are recorded at 5 cm depth and 5 cycles at 50 cm depth. In Malniu, located at a higher elevation showing a thicker and longer snow cover, only 17 freeze-thaw cycles per year are recorded at 5 cm depth, with no cycles recorded at 50 cm depth. Soils remain unfrozen during years with a very thick snow cover. The snow cover is also largely conditioned by the microtopography and exposure to the dominant winds. These factors condition the distribution, duration and intensity of the frozen ground and, thus, determine the intensity of periglacial processes in these areas.