CO2 fertilization stimulates vegetation productivity but has little impact on hydrology in tropical rainforests

NASA Astrophysics Data System (ADS)

Yang, Yuting; Donohue, Randall; McVicar, Tim; Roderick, Michael; Beck, Hylke

2016-04-01

Tropical rainforests contribute to ~52% of the terrestrial biomass carbon and more than one-third of global terrestrial net primary production. Thus, understanding how tropical rainforests respond to elevated atmospheric CO2 concentration (eCO2) is essential for predicting Earth's carbon, water and energy budgets under future climate change. While the Free-air CO2 enrichment (FACE) technique has greatly advanced our understanding of how boreal and temperate ecosystems respond to eCO2, there are currently no FACE sites available in tropical rainforest ecosystems. Here we firstly examine the trend in long-term (1982-2010) satellite-observed leaf area index and fraction of vegetation light absorption and find only minor changes in these variables in tropical rainforests over years, suggesting that eCO2 has not increased vegetation leaf area in tropical rainforests and therefore any plant response to eCO2 occurs at the leaf-level. Following that, we investigate the long-term physiological response (i.e., leaf-level) of tropical rainforests to eCO2 from three different perspectives by: (1) analyzing long-term runoff and precipitation records in 18 unimpaired tropical rainforest catchments to provide observational evidence on the eCO2 effect from an eco-hydrological perspective; (2) developing an analytical model using gas-exchange theory to predict the effect of eCO2 from a top-down perspective; and (3) interpreting outputs from 10 process-oriented ecosystem models to examine the effect of eCO2 from a bottom-up perspective. Our results show that the observed runoff coefficient (the ratio of runoff over precipitation) and ecosystem evapotranspiration (calculated from catchment water balance) remain relatively constant in 18 unimpaired tropical catchments over 1982-2010, implying an unchanged hydrological partitioning and thus conserved transpiration under eCO2. For the same period, using 'top-down' model based on gas-exchange theory, we predict an increase in plant assimilation (A) driven directly by an enhanced light use efficiency (ɛ) at the leaf-level in response to eCO2, the magnitude of which is about the same as that of eCO2 (i.e., ~12% over 1982-2010). Simulations from ten state-of-the-art 'bottom-up' ecosystem models also confirm that in tropical rainforests, direct effect of eCO2 mainly increases A and ɛ but does not change E. Our findings add to the current limited pool of knowledge regarding the long-term eCO2 impacts in tropical rainforests and provide important scientific guidance for future ecophysiology / ecohydrology modelling and field activities conducted in the area.

Landscape patterns in rainforest phylogenetic signal: isolated islands of refugia or structured continental distributions?

PubMed

Kooyman, Robert M; Rossetto, Maurizio; Sauquet, Hervé; Laffan, Shawn W

2013-01-01

Identify patterns of change in species distributions, diversity, concentrations of evolutionary history, and assembly of Australian rainforests. We used the distribution records of all known rainforest woody species in Australia across their full continental extent. These were analysed using measures of species richness, phylogenetic diversity (PD), phylogenetic endemism (PE) and phylogenetic structure (net relatedness index; NRI). Phylogenetic structure was assessed using both continental and regional species pools. To test the influence of growth-form, freestanding and climbing plants were analysed independently, and in combination. Species richness decreased along two generally orthogonal continental axes, corresponding with wet to seasonally dry and tropical to temperate habitats. The PE analyses identified four main areas of substantially restricted phylogenetic diversity, including parts of Cape York, Wet Tropics, Border Ranges, and Tasmania. The continental pool NRI results showed evenness (species less related than expected by chance) in groups of grid cells in coastally aligned areas of species rich tropical and sub-tropical rainforest, and in low diversity moist forest areas in the south-east of the Great Dividing Range and in Tasmania. Monsoon and drier vine forests, and moist forests inland from upland refugia showed phylogenetic clustering, reflecting lower diversity and more relatedness. Signals for evenness in Tasmania and clustering in northern monsoon forests weakened in analyses using regional species pools. For climbing plants, values for NRI by grid cell showed strong spatial structuring, with high diversity and PE concentrated in moist tropical and subtropical regions. Concentrations of rainforest evolutionary history (phylo-diversity) were patchily distributed within a continuum of species distributions. Contrasting with previous concepts of rainforest community distribution, our findings of continuous distributions and continental connectivity have significant implications for interpreting rainforest evolutionary history and current day ecological processes, and for managing rainforest diversity in changing circumstances.

The response of tropical rainforests to drought-lessons from recent research and future prospects.

PubMed

Bonal, Damien; Burban, Benoit; Stahl, Clément; Wagner, Fabien; Hérault, Bruno

We review the recent findings on the influence of drought on tree mortality, growth or ecosystem functioning in tropical rainforests. Drought plays a major role in shaping tropical rainforests and the response mechanisms are highly diverse and complex. The numerous gaps identified here require the international scientific community to combine efforts in order to conduct comprehensive studies in tropical rainforests on the three continents. These results are essential to simulate the future of these ecosystems under diverse climate scenarios and to predict the future of the global earth carbon balance. Tropical rainforest ecosystems are characterized by high annual rainfall. Nevertheless, rainfall regularly fluctuates during the year and seasonal soil droughts do occur. Over the past decades, a number of extreme droughts have hit tropical rainforests, not only in Amazonia but also in Asia and Africa. The influence of drought events on tree mortality and growth or on ecosystem functioning (carbon and water fluxes) in tropical rainforest ecosystems has been studied intensively, but the response mechanisms are complex. Herein, we review the recent findings related to the response of tropical forest ecosystems to seasonal and extreme droughts and the current knowledge about the future of these ecosystems. This review emphasizes the progress made over recent years and the importance of the studies conducted under extreme drought conditions or in through-fall exclusion experiments in understanding the response of these ecosystems. It also points to the great diversity and complexity of the response of tropical rainforest ecosystems to drought. The numerous gaps identified here require the international scientific community to combine efforts in order to conduct comprehensive studies in tropical forest regions. These results are essential to simulate the future of these ecosystems under diverse climate scenarios and to predict the future of the global earth carbon balance.

Diversity of Platygastridae in Leaf Litter and Understory Layers of Tropical Rainforests of the Western Ghats Biodiversity Hotspot, India.

PubMed

Manoj, K; Rajesh, T P; Prashanth Ballullaya, U; Meharabi, K M; Shibil, V K; Rajmohana, K; Sinu, Palatty Allesh

2017-06-01

Platygastridae is the third largest family of parasitic Hymenoptera in the world. It includes important egg and larval parasitoids of insects and spiders. Therefore, Platygastridae is functionally important in maintaining the stability of tropical rainforests and agroecosystems. Although the diversity of Platygastridae is relatively well-known in agroecosystems, we know little about their diversity in tropical rainforests, and particularly about that of the leaf litter layer. Here, we address the importance of monitoring Platygastridae in tropical rainforests, using data from the relic primary forests of the sacred groves of the Western Ghats. First, we demonstrate that pitfall traps allow us to catch a wide array of representative diversity of Platygastridae of the tropical rainforests, and we establish an efficient collection method to study Platygastridae of leaf litter layer. Second, we demonstrate that the community structure and composition of Platygastridae of the leaf litter layer is different from that seen in the understory of the forests. This indirectly informs us that the Malaise traps capture only a minor subset of the species active in the rainforests. Third, we find that the dry and wet seasons captured dissimilar community of Platygastridae, suggesting that the season might alter the potential host species or host stages. We conclude that monitoring parasitic Hymenoptera in the leaf litter layer of tropical rainforests can provide fresh insights on the species distribution of both the parasitoids and their hosts, and allows us to examine the current state of the tropical rainforests from a functional point of view. © The Authors 2017. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

The atmospheric chemistry of trace gases and particulate matter emitted by different land uses in Borneo

PubMed Central

MacKenzie, A. R.; Langford, B.; Pugh, T. A. M.; Robinson, N.; Misztal, P. K.; Heard, D. E.; Lee, J. D.; Lewis, A. C.; Jones, C. E.; Hopkins, J. R.; Phillips, G.; Monks, P. S.; Karunaharan, A.; Hornsby, K. E.; Nicolas-Perea, V.; Coe, H.; Gabey, A. M.; Gallagher, M. W.; Whalley, L. K.; Edwards, P. M.; Evans, M. J.; Stone, D.; Ingham, T.; Commane, R.; Furneaux, K. L.; McQuaid, J. B.; Nemitz, E.; Seng, Yap Kok; Fowler, D.; Pyle, J. A.; Hewitt, C. N.

2011-01-01

We report measurements of atmospheric composition over a tropical rainforest and over a nearby oil palm plantation in Sabah, Borneo. The primary vegetation in each of the two landscapes emits very different amounts and kinds of volatile organic compounds (VOCs), resulting in distinctive VOC fingerprints in the atmospheric boundary layer for both landscapes. VOCs over the Borneo rainforest are dominated by isoprene and its oxidation products, with a significant additional contribution from monoterpenes. Rather than consuming the main atmospheric oxidant, OH, these high concentrations of VOCs appear to maintain OH, as has been observed previously over Amazonia. The boundary-layer characteristics and mixing ratios of VOCs observed over the Borneo rainforest are different to those measured previously over Amazonia. Compared with the Bornean rainforest, air over the oil palm plantation contains much more isoprene, monoterpenes are relatively less important, and the flower scent, estragole, is prominent. Concentrations of nitrogen oxides are greater above the agro-industrial oil palm landscape than over the rainforest, and this leads to changes in some secondary pollutant mixing ratios (but not, currently, differences in ozone). Secondary organic aerosol over both landscapes shows a significant contribution from isoprene. Primary biological aerosol dominates the super-micrometre aerosol over the rainforest and is likely to be sensitive to land-use change, since the fungal source of the bioaerosol is closely linked to above-ground biodiversity. PMID:22006961

Peru: Current Conditions and U.S. Relations

DTIC Science & Technology

2009-07-21

to development and poverty reduction. Of Peru’s 173 million acres of rainforest in the Amazon basin, about 70% has been granted or offered as...investment that will benefit the country as a whole. Indigenous peoples of the Amazon rainforest counter that the government is ignoring and/or...sent police to break up blockades set up by thousands of indigenous protesters in the Amazon . The deadly clash between the indigenous protesters and

Disentangling the relative effects of bushmeat availability on human nutrition in central Africa.

PubMed

Fa, John E; Olivero, Jesús; Real, Raimundo; Farfán, Miguel A; Márquez, Ana L; Vargas, J Mario; Ziegler, Stefan; Wegmann, Martin; Brown, David; Margetts, Barrie; Nasi, Robert

2015-02-02

We studied links between human malnutrition and wild meat availability within the Rainforest Biotic Zone in central Africa. We distinguished two distinct hunted mammalian diversity distributions, one in the rainforest areas (Deep Rainforest Diversity, DRD) containing taxa of lower hunting sustainability, the other in the northern rainforest-savanna mosaic, with species of greater hunting potential (Marginal Rainforest Diversity, MRD). Wild meat availability, assessed by standing crop mammalian biomass, was greater in MRD than in DRD areas. Predicted bushmeat extraction was also higher in MRD areas. Despite this, stunting of children, a measure of human malnutrition, was greater in MRD areas. Structural equation modeling identified that, in MRD areas, mammal diversity fell away from urban areas, but proximity to these positively influenced higher stunting incidence. In DRD areas, remoteness and distance from dense human settlements and infrastructures explained lower stunting levels. Moreover, stunting was higher away from protected areas. Our results suggest that in MRD areas, forest wildlife rational use for better human nutrition is possible. By contrast, the relatively low human populations in DRD areas currently offer abundant opportunities for the continued protection of more vulnerable mammals and allow dietary needs of local populations to be met.

Disentangling the relative effects of bushmeat availability on human nutrition in central Africa

NASA Astrophysics Data System (ADS)

Fa, John E.; Olivero, Jesús; Real, Raimundo; Farfán, Miguel A.; Márquez, Ana L.; Vargas, J. Mario; Ziegler, Stefan; Wegmann, Martin; Brown, David; Margetts, Barrie; Nasi, Robert

2015-02-01

We studied links between human malnutrition and wild meat availability within the Rainforest Biotic Zone in central Africa. We distinguished two distinct hunted mammalian diversity distributions, one in the rainforest areas (Deep Rainforest Diversity, DRD) containing taxa of lower hunting sustainability, the other in the northern rainforest-savanna mosaic, with species of greater hunting potential (Marginal Rainforest Diversity, MRD). Wild meat availability, assessed by standing crop mammalian biomass, was greater in MRD than in DRD areas. Predicted bushmeat extraction was also higher in MRD areas. Despite this, stunting of children, a measure of human malnutrition, was greater in MRD areas. Structural equation modeling identified that, in MRD areas, mammal diversity fell away from urban areas, but proximity to these positively influenced higher stunting incidence. In DRD areas, remoteness and distance from dense human settlements and infrastructures explained lower stunting levels. Moreover, stunting was higher away from protected areas. Our results suggest that in MRD areas, forest wildlife rational use for better human nutrition is possible. By contrast, the relatively low human populations in DRD areas currently offer abundant opportunities for the continued protection of more vulnerable mammals and allow dietary needs of local populations to be met.

Are lowland rainforests really evolutionary museums? Phylogeography of the green hylia (Hylia prasina) in the Afrotropics.

PubMed

Marks, Ben D

2010-04-01

A recent trend in the literature highlights the special role that tropical montane regions and habitat transitions peripheral to large blocks of lowland rainforest play in the diversification process. The emerging view is one of lowland rainforests as evolutionary 'museums'; where biotic diversity is maintained over evolutionary time, and additional diversity is accrued from peripheral areas, but where there has been little recent diversification. This leads to the prediction of genetic diversity without geographic structure in widespread taxa. Here, I assess the notion of the lowland rainforest 'museum' with a phylogeographic study of the green hylia (Aves: Sylviidae: Hylia prasina) using 1132 bp of mtDNA sequence data. The distribution of genetic diversity within the mainland subspecies of Hylia reveals five highly divergent haplotype groups distributed in accordance with broad-scale areas of endemism in the Afrotropics. This pattern of genetic diversity within a currently described subspecies refutes the characterization of lowland forests as evolutionary museums. If the pattern of geographic variation in Hylia occurs broadly in widespread rainforest species, conservation policy makers may need to rethink their priorities for conservation in the Afrotropics. (c) 2009 Elsevier Inc. All rights reserved.

Landscape Patterns in Rainforest Phylogenetic Signal: Isolated Islands of Refugia or Structured Continental Distributions?

PubMed Central

Kooyman, Robert M.; Rossetto, Maurizio; Sauquet, Hervé; Laffan, Shawn W.

2013-01-01

Objectives Identify patterns of change in species distributions, diversity, concentrations of evolutionary history, and assembly of Australian rainforests. Methods We used the distribution records of all known rainforest woody species in Australia across their full continental extent. These were analysed using measures of species richness, phylogenetic diversity (PD), phylogenetic endemism (PE) and phylogenetic structure (net relatedness index; NRI). Phylogenetic structure was assessed using both continental and regional species pools. To test the influence of growth-form, freestanding and climbing plants were analysed independently, and in combination. Results Species richness decreased along two generally orthogonal continental axes, corresponding with wet to seasonally dry and tropical to temperate habitats. The PE analyses identified four main areas of substantially restricted phylogenetic diversity, including parts of Cape York, Wet Tropics, Border Ranges, and Tasmania. The continental pool NRI results showed evenness (species less related than expected by chance) in groups of grid cells in coastally aligned areas of species rich tropical and sub-tropical rainforest, and in low diversity moist forest areas in the south-east of the Great Dividing Range and in Tasmania. Monsoon and drier vine forests, and moist forests inland from upland refugia showed phylogenetic clustering, reflecting lower diversity and more relatedness. Signals for evenness in Tasmania and clustering in northern monsoon forests weakened in analyses using regional species pools. For climbing plants, values for NRI by grid cell showed strong spatial structuring, with high diversity and PE concentrated in moist tropical and subtropical regions. Conclusions/Significance Concentrations of rainforest evolutionary history (phylo-diversity) were patchily distributed within a continuum of species distributions. Contrasting with previous concepts of rainforest community distribution, our findings of continuous distributions and continental connectivity have significant implications for interpreting rainforest evolutionary history and current day ecological processes, and for managing rainforest diversity in changing circumstances. PMID:24312493

Early anthropogenic impact on Western Central African rainforests 2,600 y ago

NASA Astrophysics Data System (ADS)

Garcin, Yannick; Deschamps, Pierre; Ménot, Guillemette; de Saulieu, Geoffroy; Schefuß, Enno; Sebag, David; Dupont, Lydie M.; Oslisly, Richard; Brademann, Brian; Mbusnum, Kevin G.; Onana, Jean-Michel; Ako, Andrew A.; Epp, Laura S.; Tjallingii, Rik; Strecker, Manfred R.; Brauer, Achim; Sachse, Dirk

2018-03-01

A potential human footprint on Western Central African rainforests before the Common Era has become the focus of an ongoing controversy. Between 3,000 y ago and 2,000 y ago, regional pollen sequences indicate a replacement of mature rainforests by a forest–savannah mosaic including pioneer trees. Although some studies suggested an anthropogenic influence on this forest fragmentation, current interpretations based on pollen data attribute the ‘‘rainforest crisis’’ to climate change toward a drier, more seasonal climate. A rigorous test of this hypothesis, however, requires climate proxies independent of vegetation changes. Here we resolve this controversy through a continuous 10,500-y record of both vegetation and hydrological changes from Lake Barombi in Southwest Cameroon based on changes in carbon and hydrogen isotope compositions of plant waxes. δ13C-inferred vegetation changes confirm a prominent and abrupt appearance of C4 plants in the Lake Barombi catchment, at 2,600 calendar years before AD 1950 (cal y BP), followed by an equally sudden return to rainforest vegetation at 2,020 cal y BP. δD values from the same plant wax compounds, however, show no simultaneous hydrological change. Based on the combination of these data with a comprehensive regional archaeological database we provide evidence that humans triggered the rainforest fragmentation 2,600 y ago. Our findings suggest that technological developments, including agricultural practices and iron metallurgy, possibly related to the large-scale Bantu expansion, significantly impacted the ecosystems before the Common Era.

Early anthropogenic impact on Western Central African rainforests 2,600 y ago.

PubMed

Garcin, Yannick; Deschamps, Pierre; Ménot, Guillemette; de Saulieu, Geoffroy; Schefuß, Enno; Sebag, David; Dupont, Lydie M; Oslisly, Richard; Brademann, Brian; Mbusnum, Kevin G; Onana, Jean-Michel; Ako, Andrew A; Epp, Laura S; Tjallingii, Rik; Strecker, Manfred R; Brauer, Achim; Sachse, Dirk

2018-03-27

A potential human footprint on Western Central African rainforests before the Common Era has become the focus of an ongoing controversy. Between 3,000 y ago and 2,000 y ago, regional pollen sequences indicate a replacement of mature rainforests by a forest-savannah mosaic including pioneer trees. Although some studies suggested an anthropogenic influence on this forest fragmentation, current interpretations based on pollen data attribute the ''rainforest crisis'' to climate change toward a drier, more seasonal climate. A rigorous test of this hypothesis, however, requires climate proxies independent of vegetation changes. Here we resolve this controversy through a continuous 10,500-y record of both vegetation and hydrological changes from Lake Barombi in Southwest Cameroon based on changes in carbon and hydrogen isotope compositions of plant waxes. [Formula: see text] 13 C-inferred vegetation changes confirm a prominent and abrupt appearance of C 4 plants in the Lake Barombi catchment, at 2,600 calendar years before AD 1950 (cal y BP), followed by an equally sudden return to rainforest vegetation at 2,020 cal y BP. [Formula: see text]D values from the same plant wax compounds, however, show no simultaneous hydrological change. Based on the combination of these data with a comprehensive regional archaeological database we provide evidence that humans triggered the rainforest fragmentation 2,600 y ago. Our findings suggest that technological developments, including agricultural practices and iron metallurgy, possibly related to the large-scale Bantu expansion, significantly impacted the ecosystems before the Common Era.

Impacts of warming on tropical lowland rainforests.

PubMed

Corlett, Richard T

2011-11-01

Before the end of this century, tropical rainforests will be subject to climatic conditions that have not existed anywhere on Earth for millions of years. These forests are the most species-rich ecosystems in the world and play a crucial role in regulating carbon and water feedbacks in the global climate system; therefore, it is important that the probable impacts of anthropogenic climate change are understood. However, the recent literature shows a striking range of views on the vulnerability of tropical rainforests, from least to most concern among major ecosystems. This review, which focuses on the impact of rising temperatures, examines the evidence for and against high vulnerability, identifies key research needs for resolving current differences and suggests ways of mitigating or adapting to potential impacts. Copyright © 2011 Elsevier Ltd. All rights reserved.

Persistent anthrax as a major driver of wildlife mortality in a tropical rainforest

NASA Astrophysics Data System (ADS)

Hoffmann, Constanze; Zimmermann, Fee; Biek, Roman; Kuehl, Hjalmar; Nowak, Kathrin; Mundry, Roger; Agbor, Anthony; Angedakin, Samuel; Arandjelovic, Mimi; Blankenburg, Anja; Brazolla, Gregory; Corogenes, Katherine; Couacy-Hymann, Emmanuel; Deschner, Tobias; Dieguez, Paula; Dierks, Karsten; Düx, Ariane; Dupke, Susann; Eshuis, Henk; Formenty, Pierre; Yuh, Yisa Ginath; Goedmakers, Annemarie; Gogarten, Jan F.; Granjon, Anne-Céline; McGraw, Scott; Grunow, Roland; Hart, John; Jones, Sorrel; Junker, Jessica; Kiang, John; Langergraber, Kevin; Lapuente, Juan; Lee, Kevin; Leendertz, Siv Aina; Léguillon, Floraine; Leinert, Vera; Löhrich, Therese; Marrocoli, Sergio; Mätz-Rensing, Kerstin; Meier, Amelia; Merkel, Kevin; Metzger, Sonja; Murai, Mizuki; Niedorf, Svenja; de Nys, Hélène; Sachse, Andreas; van Schijndel, Joost; Thiesen, Ulla; Ton, Els; Wu, Doris; Wieler, Lothar H.; Boesch, Christophe; Klee, Silke R.; Wittig, Roman M.; Calvignac-Spencer, Sébastien; Leendertz, Fabian H.

2017-08-01

Anthrax is a globally important animal disease and zoonosis. Despite this, our current knowledge of anthrax ecology is largely limited to arid ecosystems, where outbreaks are most commonly reported. Here we show that the dynamics of an anthrax-causing agent, Bacillus cereus biovar anthracis, in a tropical rainforest have severe consequences for local wildlife communities. Using data and samples collected over three decades, we show that rainforest anthrax is a persistent and widespread cause of death for a broad range of mammalian hosts. We predict that this pathogen will accelerate the decline and possibly result in the extirpation of local chimpanzee (Pan troglodytes verus) populations. We present the epidemiology of a cryptic pathogen and show that its presence has important implications for conservation.

Persistent anthrax as a major driver of wildlife mortality in a tropical rainforest.

PubMed

Hoffmann, Constanze; Zimmermann, Fee; Biek, Roman; Kuehl, Hjalmar; Nowak, Kathrin; Mundry, Roger; Agbor, Anthony; Angedakin, Samuel; Arandjelovic, Mimi; Blankenburg, Anja; Brazolla, Gregory; Corogenes, Katherine; Couacy-Hymann, Emmanuel; Deschner, Tobias; Dieguez, Paula; Dierks, Karsten; Düx, Ariane; Dupke, Susann; Eshuis, Henk; Formenty, Pierre; Yuh, Yisa Ginath; Goedmakers, Annemarie; Gogarten, Jan F; Granjon, Anne-Céline; McGraw, Scott; Grunow, Roland; Hart, John; Jones, Sorrel; Junker, Jessica; Kiang, John; Langergraber, Kevin; Lapuente, Juan; Lee, Kevin; Leendertz, Siv Aina; Léguillon, Floraine; Leinert, Vera; Löhrich, Therese; Marrocoli, Sergio; Mätz-Rensing, Kerstin; Meier, Amelia; Merkel, Kevin; Metzger, Sonja; Murai, Mizuki; Niedorf, Svenja; De Nys, Hélène; Sachse, Andreas; van Schijndel, Joost; Thiesen, Ulla; Ton, Els; Wu, Doris; Wieler, Lothar H; Boesch, Christophe; Klee, Silke R; Wittig, Roman M; Calvignac-Spencer, Sébastien; Leendertz, Fabian H

2017-08-02

Anthrax is a globally important animal disease and zoonosis. Despite this, our current knowledge of anthrax ecology is largely limited to arid ecosystems, where outbreaks are most commonly reported. Here we show that the dynamics of an anthrax-causing agent, Bacillus cereus biovar anthracis, in a tropical rainforest have severe consequences for local wildlife communities. Using data and samples collected over three decades, we show that rainforest anthrax is a persistent and widespread cause of death for a broad range of mammalian hosts. We predict that this pathogen will accelerate the decline and possibly result in the extirpation of local chimpanzee (Pan troglodytes verus) populations. We present the epidemiology of a cryptic pathogen and show that its presence has important implications for conservation.

Comparative phylogeography and demographic history of the wood lemming (Myopus schisticolor): implications for late Quaternary history of the taiga species in Eurasia.

PubMed

Fedorov, V B; Goropashnaya, A V; Boeskorov, G G; Cook, J A

2008-01-01

The association between demographic history, genealogy and geographical distribution of mitochondrial DNA cytochrome b haplotypes was studied in the wood lemming (Myopus schisticolor), a species that is closely associated with the boreal forest of the Eurasian taiga zone from Scandinavia to the Pacific coast. Except for a major phylogeographic discontinuity (0.9% nucleotide divergence) in southeastern Siberia, only shallow regional genetic structure was detected across northern Eurasia. Genetic signs of demographic expansions imply that successive range contractions and expansions on different spatial scales represented the primary historical events that shaped geographical patterns of genetic variation. Comparison of phylogeographic structure across a taxonomically diverse array of other species that are ecologically associated with the taiga forest revealed similar patterns and identified two general aspects. First, the major south-north phylogeographic discontinuity observed in five out of six species studied in southeastern Siberia and the Far East implies vicariant separation in two different refugial areas. The limited distribution range of the southeastern lineages provides no evidence of the importance of the putative southeastern refugial area for postglacial colonization of northern Eurasia by boreal forest species. Second, the lack of phylogeographic structure associated with significant reciprocal monophyly and genetic signatures of demographic expansion in all nine boreal forest animal species studied to date across most of northern Eurasia imply contraction of each species to a single refugial area during the late Pleistocene followed by range expansion on a continental scale. Similar phylogeographic patterns observed in this taxonomically diverse set of organisms with different life histories and dispersal potentials reflect the historical dynamics of their shared environment, the taiga forest in northern Eurasia.

Habitat history improves prediction of biodiversity in rainforest fauna

PubMed Central

Graham, Catherine H.; Moritz, Craig; Williams, Stephen E.

2006-01-01

Patterns of biological diversity should be interpreted in light of both contemporary and historical influences; however, to date, most attempts to explain diversity patterns have largely ignored history or have been unable to quantify the influence of historical processes. The historical effects on patterns of diversity have been hypothesized to be most important for taxonomic groups with poor dispersal abilities. We quantified the relative stability of rainforests over the late Quaternary period by modeling rainforest expansion and contraction in 21 biogeographic subregions in northeast Australia across four time periods. We demonstrate that historical habitat stability can be as important, and in endemic low-dispersal taxa even more important, than current habitat area in explaining spatial patterns of species richness. In contrast, patterns of endemic species richness for taxa with high dispersal capacity are best predicted by using current environmental parameters. We also show that contemporary patterns of species turnover across the region are best explained by historical patterns of habitat connectivity. These results clearly demonstrate that spatially explicit analyses of the historical processes of persistence and colonization are both effective and necessary for understanding observed patterns of biodiversity. PMID:16407139

Structural attributes of individual trees for identifying homogeneous patches in a tropical rainforest

NASA Astrophysics Data System (ADS)

Alexander, Cici; Korstjens, Amanda H.; Hill, Ross A.

2017-03-01

Mapping and monitoring tropical rainforests and quantifying their carbon stocks are important, both for devising strategies for their conservation and mitigating the effects of climate change. Airborne Laser Scanning (ALS) has advantages over other remote sensing techniques for describing the three-dimensional structure of forests. This study identifies forest patches using ALS-based structural attributes in a tropical rainforest in Sumatra, Indonesia. A method to group trees with similar attributes into forest patches based on Thiessen polygons and k-medoids clustering is developed, combining the advantages of both raster and individual tree-based methods. The structural composition of the patches could be an indicator of habitat type and quality. The patches could also be a basis for developing allometric models for more accurate estimation of carbon stock than is currently possible with generalised models.

Environmental and climatic conditions at a potential Glacial refugial site of tree species near the Southern Alpine glaciers. New insights from multiproxy sedimentary studies at Lago della Costa (Euganean Hills, Northeastern Italy)

NASA Astrophysics Data System (ADS)

Kaltenrieder, Petra; Belis, Claudio A.; Hofstetter, Simone; Ammann, Brigitta; Ravazzi, Cesare; Tinner, Willy

2009-12-01

It has been hypothesized that refugia of thermophilous tree species were located in Northern Italy very close to the Alps, though, this hypothesis has yet to be tested thoroughly. In contrast to Central and Southern Italy with its relative wealth of data, only a few fragmentary records are currently available from Northern Italy for the last Glacial (Würm, Weichselian). Our new study site Lago della Costa lies adjacent to the catchment of the megafans of the Alpine forelands and the braided rivers of the Northeastern Po Plain that have so far inhibited the recovery of continuous Glacial and Late-Glacial records. We analyze pollen, plant macrofossils, charcoal and ostracods to reconstruct the vegetation, fire and lake history for the period 33,000-16,000 cal. BP. We compare our data with Glacial records from Southern Europe to discuss similarities and dissimilarities between these potential refugial areas. A comparison with independent paleoclimatic proxies allows to assess potential linkages between environmental and climatic variability. New macrofossil and pollen data at Lago della Costa unambiguously document the local persistence of boreal tree taxa such as Larix decidua and Betula tree species around the study site during the last Glacial. The regular occurrence of pollen of temperate trees in the organic lake sediments (fine-detritus calcareous gyttja) suggests that temperate taxa such as Corylus avellana, Quercus deciduous, Tilia, Ulmus, Fraxinus excelsior, Carpinus, Abies alba and Fagus sylvatica, most likely survived the Last Glacial Maximum (LGM) at favorable sites in the Euganean Hills. The percentage values of temperate trees are comparable with those from Southern Europe (e.g. Monticchio in Southern Italy). We conclude that the Euganean Hills were one of the northernmost refugial areas of temperate taxa in Europe. However, the relative and absolute abundances of pollen of temperate trees are highly variable. Pollen-inferred declines of temperate tree communities (e.g. Quercetum mixtum) and low ostracod-inferred water levels at Lago della Costa correspond to the cold Heinrich events H-2 (LGM; 23,000-19,000 cal. BP) and H-3 (around 28,000 cal. BP), as recorded in the marine sediments of the North Atlantic. Similar patterns of significant temperate tree population collapses during cold Heinrich events are recorded at southern Mediterranean sites (e.g. Monticchio and the Alboran Sea). These findings suggest close linkages between Northern Atlantic and South-Central European climates during the past Glacial.

Water, land, fire, and forest: Multi-scale determinants of rainforests in the Australian monsoon tropics.

PubMed

Ondei, Stefania; Prior, Lynda D; Williamson, Grant J; Vigilante, Tom; Bowman, David M J S

2017-03-01

The small rainforest fragments found in savanna landscapes are powerful, yet often overlooked, model systems to understand the controls of these contrasting ecosystems. We analyzed the relative effect of climatic variables on rainforest density at a subcontinental level, and employed high-resolution, regional-level analyses to assess the importance of landscape settings and fire activity in determining rainforest density in a frequently burnt Australian savanna landscape. Estimates of rainforest density (ha/km 2 ) across the Northern Territory and Western Australia, derived from preexisting maps, were used to calculate the correlations between rainforest density and climatic variables. A detailed map of the northern Kimberley (Western Australia) rainforests was generated and analyzed to determine the importance of geology and topography in controlling rainforests, and to contrast rainforest density on frequently burnt mainland and nearby islands. In the northwestern Australian, tropics rainforest density was positively correlated with rainfall and moisture index, and negatively correlated with potential evapotranspiration. At a regional scale, rainforests showed preference for complex topographic positions and more fertile geology. Compared with mainland areas, islands had significantly lower fire activity, with no differences between terrain types. They also displayed substantially higher rainforest density, even on level terrain where geomorphological processes do not concentrate nutrients or water. Our multi-scale approach corroborates previous studies that suggest moist climate, infrequent fires, and geology are important stabilizing factors that allow rainforest fragments to persist in savanna landscapes. These factors need to be incorporated in models to predict the future extent of savannas and rainforests under climate change.

Environmental impact of geometric earthwork construction in pre-Columbian Amazonia.

PubMed

Carson, John Francis; Whitney, Bronwen S; Mayle, Francis E; Iriarte, José; Prümers, Heiko; Soto, J Daniel; Watling, Jennifer

2014-07-22

There is considerable controversy over whether pre-Columbian (pre-A.D. 1492) Amazonia was largely "pristine" and sparsely populated by slash-and-burn agriculturists, or instead a densely populated, domesticated landscape, heavily altered by extensive deforestation and anthropogenic burning. The discovery of hundreds of large geometric earthworks beneath intact rainforest across southern Amazonia challenges its status as a pristine landscape, and has been assumed to indicate extensive pre-Columbian deforestation by large populations. We tested these assumptions using coupled local- and regional-scale paleoecological records to reconstruct land use on an earthwork site in northeast Bolivia within the context of regional, climate-driven biome changes. This approach revealed evidence for an alternative scenario of Amazonian land use, which did not necessitate labor-intensive rainforest clearance for earthwork construction. Instead, we show that the inhabitants exploited a naturally open savanna landscape that they maintained around their settlement despite the climatically driven rainforest expansion that began ∼2,000 y ago across the region. Earthwork construction and agriculture on terra firme landscapes currently occupied by the seasonal rainforests of southern Amazonia may therefore not have necessitated large-scale deforestation using stone tools. This finding implies far less labor--and potentially lower population density--than previously supposed. Our findings demonstrate that current debates over the magnitude and nature of pre-Columbian Amazonian land use, and its impact on global biogeochemical cycling, are potentially flawed because they do not consider this land use in the context of climate-driven forest-savanna biome shifts through the mid-to-late Holocene.

Environmental impact of geometric earthwork construction in pre-Columbian Amazonia

PubMed Central

Carson, John Francis; Whitney, Bronwen S.; Mayle, Francis E.; Iriarte, José; Prümers, Heiko; Soto, J. Daniel; Watling, Jennifer

2014-01-01

There is considerable controversy over whether pre-Columbian (pre-A.D. 1492) Amazonia was largely “pristine” and sparsely populated by slash-and-burn agriculturists, or instead a densely populated, domesticated landscape, heavily altered by extensive deforestation and anthropogenic burning. The discovery of hundreds of large geometric earthworks beneath intact rainforest across southern Amazonia challenges its status as a pristine landscape, and has been assumed to indicate extensive pre-Columbian deforestation by large populations. We tested these assumptions using coupled local- and regional-scale paleoecological records to reconstruct land use on an earthwork site in northeast Bolivia within the context of regional, climate-driven biome changes. This approach revealed evidence for an alternative scenario of Amazonian land use, which did not necessitate labor-intensive rainforest clearance for earthwork construction. Instead, we show that the inhabitants exploited a naturally open savanna landscape that they maintained around their settlement despite the climatically driven rainforest expansion that began ∼2,000 y ago across the region. Earthwork construction and agriculture on terra firme landscapes currently occupied by the seasonal rainforests of southern Amazonia may therefore not have necessitated large-scale deforestation using stone tools. This finding implies far less labor—and potentially lower population density—than previously supposed. Our findings demonstrate that current debates over the magnitude and nature of pre-Columbian Amazonian land use, and its impact on global biogeochemical cycling, are potentially flawed because they do not consider this land use in the context of climate-driven forest–savanna biome shifts through the mid-to-late Holocene. PMID:25002502

Using biological data to test climate change refugia

NASA Astrophysics Data System (ADS)

Morelli, T. L.; Maher, S. P.

2015-12-01

The concept of refugia has been discussed from theoretical and paleontological perspectives to address how populations persisted during periods of unfavorable climate. Recently, several studies have applied the idea to contemporary landscapes to identify locations that are buffered from climate change effects so as to favor greater persistence of valued resources relative to other areas. Refugia are now being discussed among natural resource agencies as a potential adaptation option in the face of anthropogenic climate change. Using downscaled climate data, we identified hypothetical refugial meadows in the Sierra Nevada and then tested them using survey and genetic data from Belding's ground squirrel (Urocitellus beldingi) populations. We predicted that refugial meadows would show higher genetic diversity, higher rates of occupancy and lower rates of extirpation over time. At each step of the research, we worked with managers to ensure the largest impact. Although no panacea, identifying climate change refugia could be an important strategy for prioritizing habitats for management intervention in order to conserve populations. This research was supported by the California LCC, the Northeast Climate Science Center, and NSF.

Increased Drought Impacts on Temperate Rainforests from Southern South America: Results of a Process-Based, Dynamic Forest Model

PubMed Central

Gutiérrez, Alvaro G.; Armesto, Juan J.; Díaz, M. Francisca; Huth, Andreas

2014-01-01

Increased droughts due to regional shifts in temperature and rainfall regimes are likely to affect forests in temperate regions in the coming decades. To assess their consequences for forest dynamics, we need predictive tools that couple hydrologic processes, soil moisture dynamics and plant productivity. Here, we developed and tested a dynamic forest model that predicts the hydrologic balance of North Patagonian rainforests on Chiloé Island, in temperate South America (42°S). The model incorporates the dynamic linkages between changing rainfall regimes, soil moisture and individual tree growth. Declining rainfall, as predicted for the study area, should mean up to 50% less summer rain by year 2100. We analysed forest responses to increased drought using the model proposed focusing on changes in evapotranspiration, soil moisture and forest structure (above-ground biomass and basal area). We compared the responses of a young stand (YS, ca. 60 years-old) and an old-growth forest (OG, >500 years-old) in the same area. Based on detailed field measurements of water fluxes, the model provides a reliable account of the hydrologic balance of these evergreen, broad-leaved rainforests. We found higher evapotranspiration in OG than YS under current climate. Increasing drought predicted for this century can reduce evapotranspiration by 15% in the OG compared to current values. Drier climate will alter forest structure, leading to decreases in above ground biomass by 27% of the current value in OG. The model presented here can be used to assess the potential impacts of climate change on forest hydrology and other threats of global change on future forests such as fragmentation, introduction of exotic tree species, and changes in fire regimes. Our study expands the applicability of forest dynamics models in remote and hitherto overlooked regions of the world, such as southern temperate rainforests. PMID:25068869

Increased drought impacts on temperate rainforests from southern South America: results of a process-based, dynamic forest model.

PubMed

Gutiérrez, Alvaro G; Armesto, Juan J; Díaz, M Francisca; Huth, Andreas

2014-01-01

Increased droughts due to regional shifts in temperature and rainfall regimes are likely to affect forests in temperate regions in the coming decades. To assess their consequences for forest dynamics, we need predictive tools that couple hydrologic processes, soil moisture dynamics and plant productivity. Here, we developed and tested a dynamic forest model that predicts the hydrologic balance of North Patagonian rainforests on Chiloé Island, in temperate South America (42°S). The model incorporates the dynamic linkages between changing rainfall regimes, soil moisture and individual tree growth. Declining rainfall, as predicted for the study area, should mean up to 50% less summer rain by year 2100. We analysed forest responses to increased drought using the model proposed focusing on changes in evapotranspiration, soil moisture and forest structure (above-ground biomass and basal area). We compared the responses of a young stand (YS, ca. 60 years-old) and an old-growth forest (OG, >500 years-old) in the same area. Based on detailed field measurements of water fluxes, the model provides a reliable account of the hydrologic balance of these evergreen, broad-leaved rainforests. We found higher evapotranspiration in OG than YS under current climate. Increasing drought predicted for this century can reduce evapotranspiration by 15% in the OG compared to current values. Drier climate will alter forest structure, leading to decreases in above ground biomass by 27% of the current value in OG. The model presented here can be used to assess the potential impacts of climate change on forest hydrology and other threats of global change on future forests such as fragmentation, introduction of exotic tree species, and changes in fire regimes. Our study expands the applicability of forest dynamics models in remote and hitherto overlooked regions of the world, such as southern temperate rainforests.

The importance of forest structure for carbon fluxes of the Amazon rainforest

NASA Astrophysics Data System (ADS)

Rödig, Edna; Cuntz, Matthias; Rammig, Anja; Fischer, Rico; Taubert, Franziska; Huth, Andreas

2018-05-01

Precise descriptions of forest productivity, biomass, and structure are essential for understanding ecosystem responses to climatic and anthropogenic changes. However, relations between these components are complex, in particular for tropical forests. We developed an approach to simulate carbon dynamics in the Amazon rainforest including around 410 billion individual trees within 7.8 million km2. We integrated canopy height observations from space-borne LIDAR in order to quantify spatial variations in forest state and structure reflecting small-scale to large-scale natural and anthropogenic disturbances. Under current conditions, we identified the Amazon rainforest as a carbon sink, gaining 0.56 GtC per year. This carbon sink is driven by an estimated mean gross primary productivity (GPP) of 25.1 tC ha‑1 a‑1, and a mean woody aboveground net primary productivity (wANPP) of 4.2 tC ha‑1 a‑1. We found that successional states play an important role for the relations between productivity and biomass. Forests in early to intermediate successional states are the most productive, and woody above-ground carbon use efficiencies are non-linear. Simulated values can be compared to observed carbon fluxes at various spatial resolutions (>40 m). Notably, we found that our GPP corresponds to the values derived from MODIS. For NPP, spatial differences can be observed due to the consideration of forest successional states in our approach. We conclude that forest structure has a substantial impact on productivity and biomass. It is an essential factor that should be taken into account when estimating current carbon budgets or analyzing climate change scenarios for the Amazon rainforest.

Stock, turnover and functions of carbon in heavily weathered soils under lowland rainforest transformation systems

NASA Astrophysics Data System (ADS)

Guillaume, Thomas; Kuzyakov, Yakov

2013-04-01

Tropical rainforest are experiencing worldwide a strong lost through deforestation and transformation into agricultural systems. Land use changes in such ecosystems leads to major modifications of soils properties and processes. One indication of it are the losses of organic carbon content (Corg); an important soil fertility parameter in heavily weathered soil. Between 1985 and 2007, Sumatra (Indonesia) has lost half of his remaining natural rainforest, which currently covers only 30% the island. The deforestation is still ongoing and the main drivers of deforestation are oil palm, rubber and timber industries. Our study aims to identify and quantify the impacts of lowland rainforest transformation systems (TS): oil palm, rubber and jungle rubber plantations on soil organic carbon (SOC) and nitrogen (SON) quality, turnover and stocks and so, on soil fertility and functions. We hypothesize that transformation of natural lowland rainforest changes not only C stock and budget throughout quantity and quality of C input, but also DOM production and water consumption by vegetation, leading to a relocation of C in the subsoil. This should be reflected in C and N content in soil profile horizons as well as their δ13C and δ15N isotopic signatures. We will evaluate also C stability through biological, thermal and chemical stability in bulk soil and aggregate fractions. The TS investigated, including lowland rainforest as reference sites, are located in Jambi Province (Sumatra). Soil has been described and sampled per horizon on 4 replicates of each TS in 2 different regions (32 sites) in Autumn 2012. As hypothesized, first results show strong effects of forest transformation on C and N content, as well as on isotopic signatures of soil. Those results will also be used further to select DOM sampling depths and adequate horizons to perform sorption and incubation experiments.

Record-breaking warming and extreme drought in the Amazon rainforest during the course of El Niño 2015–2016

PubMed Central

Jiménez-Muñoz, Juan C.; Mattar, Cristian; Barichivich, Jonathan; Santamaría-Artigas, Andrés; Takahashi, Ken; Malhi, Yadvinder; Sobrino, José A.; Schrier, Gerard van der

2016-01-01

The El Niño-Southern Oscillation (ENSO) is the main driver of interannual climate extremes in Amazonia and other tropical regions. The current 2015/2016 EN event was expected to be as strong as the EN of the century in 1997/98, with extreme heat and drought over most of Amazonian rainforests. Here we show that this protracted EN event, combined with the regional warming trend, was associated with unprecedented warming and a larger extent of extreme drought in Amazonia compared to the earlier strong EN events in 1982/83 and 1997/98. Typical EN-like drought conditions were observed only in eastern Amazonia, whilst in western Amazonia there was an unusual wetting. We attribute this wet-dry dipole to the location of the maximum sea surface warming on the Central equatorial Pacific. The impacts of this climate extreme on the rainforest ecosystems remain to be documented and are likely to be different to previous strong EN events. PMID:27604976

Record-breaking warming and extreme drought in the Amazon rainforest during the course of El Niño 2015-2016

NASA Astrophysics Data System (ADS)

Jiménez-Muñoz, Juan C.; Mattar, Cristian; Barichivich, Jonathan; Santamaría-Artigas, Andrés; Takahashi, Ken; Malhi, Yadvinder; Sobrino, José A.; Schrier, Gerard Van Der

2016-09-01

The El Niño-Southern Oscillation (ENSO) is the main driver of interannual climate extremes in Amazonia and other tropical regions. The current 2015/2016 EN event was expected to be as strong as the EN of the century in 1997/98, with extreme heat and drought over most of Amazonian rainforests. Here we show that this protracted EN event, combined with the regional warming trend, was associated with unprecedented warming and a larger extent of extreme drought in Amazonia compared to the earlier strong EN events in 1982/83 and 1997/98. Typical EN-like drought conditions were observed only in eastern Amazonia, whilst in western Amazonia there was an unusual wetting. We attribute this wet-dry dipole to the location of the maximum sea surface warming on the Central equatorial Pacific. The impacts of this climate extreme on the rainforest ecosystems remain to be documented and are likely to be different to previous strong EN events.

Record-breaking warming and extreme drought in the Amazon rainforest during the course of El Niño 2015-2016.

PubMed

Jiménez-Muñoz, Juan C; Mattar, Cristian; Barichivich, Jonathan; Santamaría-Artigas, Andrés; Takahashi, Ken; Malhi, Yadvinder; Sobrino, José A; Schrier, Gerard van der

2016-09-08

The El Niño-Southern Oscillation (ENSO) is the main driver of interannual climate extremes in Amazonia and other tropical regions. The current 2015/2016 EN event was expected to be as strong as the EN of the century in 1997/98, with extreme heat and drought over most of Amazonian rainforests. Here we show that this protracted EN event, combined with the regional warming trend, was associated with unprecedented warming and a larger extent of extreme drought in Amazonia compared to the earlier strong EN events in 1982/83 and 1997/98. Typical EN-like drought conditions were observed only in eastern Amazonia, whilst in western Amazonia there was an unusual wetting. We attribute this wet-dry dipole to the location of the maximum sea surface warming on the Central equatorial Pacific. The impacts of this climate extreme on the rainforest ecosystems remain to be documented and are likely to be different to previous strong EN events.

Recently evolved diversity and convergent radiations of rainforest mahoganies (Meliaceae) shed new light on the origins of rainforest hyperdiversity.

PubMed

Koenen, Erik J M; Clarkson, James J; Pennington, Terence D; Chatrou, Lars W

2015-07-01

Tropical rainforest hyperdiversity is often suggested to have evolved over a long time-span (the 'museum' model), but there is also evidence for recent rainforest radiations. The mahoganies (Meliaceae) are a prominent plant group in lowland tropical rainforests world-wide but also occur in all other tropical ecosystems. We investigated whether rainforest diversity in Meliaceae has accumulated over a long time or has more recently evolved. We inferred the largest time-calibrated phylogeny for the family to date, reconstructed ancestral states for habitat and deciduousness, estimated diversification rates and modeled potential shifts in macro-evolutionary processes using a recently developed Bayesian method. The ancestral Meliaceae is reconstructed as a deciduous species that inhabited seasonal habitats. Rainforest clades have diversified from the Late Oligocene or Early Miocene onwards. Two contemporaneous Amazonian clades have converged on similar ecologies and high speciation rates. Most species-level diversity of Meliaceae in rainforest is recent. Other studies have found steady accumulation of lineages, but the large majority of plant species diversity in rainforests is recent, suggesting (episodic) species turnover. Rainforest hyperdiversity may best be explained by recent radiations from a large stock of higher level taxa. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

New Reasons to Preserve the Amazon Rainforest

NASA Astrophysics Data System (ADS)

Costa, M. H.

2014-12-01

Historically, preservation of the rainforest was justified in terms of conservation of biodiversity, protection of indigenous people habitats and maintenance of carbon stocks. Most of these arguments are based on the direct effect of rainforest removal, and ignore second order effects of the presence of the rainforest, such as modulation of regional climate patterns. The rainforest helps define the regional climate of the region, in particular the regional temperature and precipitation patterns. Of course, any activity that depends on the local climate may be affected by changes in the rainforest. Recent evidence in the literature presented enough arguments to believe that the widespread removal of the rainforest will have economic consequences at least in agriculture output and hydroelectric power generation. Economic impacts may affect not only the agriculture and energy sectors, but also several other economic activities that are related to climate. As a country, we are counting with the climate of Amazonia as fixed, but if the present climate needs the presence of the rainforest, we need to quantify the economic value of the climate regulation service provided by the rainforest. Important questions to be answered: How much of the rainforest is needed to conserve the present climate? Where it should stand for best climate regulation? Answer to these questions may affect Brazil´s large-scale policy on land use.

Direct evidence for human reliance on rainforest resources in late Pleistocene Sri Lanka.

PubMed

Roberts, Patrick; Perera, Nimal; Wedage, Oshan; Deraniyagala, Siran; Perera, Jude; Eregama, Saman; Gledhill, Andrew; Petraglia, Michael D; Lee-Thorp, Julia A

2015-03-13

Human occupation of tropical rainforest habitats is thought to be a mainly Holocene phenomenon. Although archaeological and paleoenvironmental data have hinted at pre-Holocene rainforest foraging, earlier human reliance on rainforest resources has not been shown directly. We applied stable carbon and oxygen isotope analysis to human and faunal tooth enamel from four late Pleistocene-to-Holocene archaeological sites in Sri Lanka. The results show that human foragers relied primarily on rainforest resources from at least ~20,000 years ago, with a distinct preference for semi-open rainforest and rain forest edges. Homo sapiens' relationship with the tropical rainforests of South Asia is therefore long-standing, a conclusion that indicates the time-depth of anthropogenic reliance and influence on these habitats. Copyright © 2015, American Association for the Advancement of Science.

Building positive nature awareness in pupils using the "Rainforest of the Austrians" in Costa Rica.

NASA Astrophysics Data System (ADS)

Aubrecht, Margit; Hölzl, Irmgard; Huber, Werner; Weissenhofer, Anton

2013-04-01

20 years ago, Michael Schnitzler founded the NGO "Rainforest of the Austrians" to help save one of the most diverse rainforests in Central America, the Esquinas rainforest on the Pacific coast of SW Costa Rica, from being destroyed through logging. In this abstract we present an interdisciplinary upper Austrian school project aiming at building positive awareness in pupils towards rainforest conservation by fund-raising to help purchase endangered forest areas. The acquired rainforest was donated to the Costa Rican government and became part of the National Park "Piedras Blancas". In the following, we present a chronology of events and actions of the school project. We started our rainforest project by face-to-face encounters, letting involved persons speak directly to the pupils. Dr. Huber, coordinator of the tropical rainforest station La Gamba in Costa Rica (www.lagamba.at), together with Dr. Weissenhofer, presented an introductory slide show about the "Rainforest of the Austrians". With rainforest images and sounds in their mind the pupils wrote "trips of a lifetime" stories, thus creating idyllic images of rainforest habitats. Following up on that, we visited the exhibition "Heliconia and Hummingbirds" at the Biology Center in Linz. Reports about the slide show and the exhibition followed. Tropical sites were compared by producing climate graphs of La Gamba, Costa Rica, and Manaus in Brazil. The global distribution and the decrease of rainforests were also analyzed. In biology lessons the symbiosis between plants and animals of the rainforest were worked out by searching the Internet. Flyers with profiles of rainforest animals were produced. We also discussed the ecotourism project "RICANCIE" in Ecuador using fact sheets. "RICANCIE" is a Spanish acronym standing for "Indigenous Community Network of the Upper Napo for Intercultural Exchange and Ecotourism". It was founded in 1993 aiming to improve the quality of life for some 200 indigenous Kichwa families. RICANCIE's primary objective is the defense of the Kichwa territory against encroaching mining and oil companies. During computer lessons pupils drew brilliant rainforest cards using graphic software, and in handicraft lessons they engraved rainforest animals on wooden plates. These pieces of art were sold at the "open school day". For presenting the project to other pupils at the secondary school Hellmonsödt, a rainforest quiz contest was prepared. The winners' prize was a tropical fruit tasting. Another presentation was done at the Biology Center in Linz with research expert Dr. Huber in the audience. The culmination was reached by handing over the sales profit to Michael Schnitzler in order to purchase rainforest land the size of a football field. Compared to other teaching methods this interdisciplinary approach perfectly involved and motivated pupils. The resulting presentations proved very important, because the pupils wanted to assure other teenagers that individuals have opportunities to influence the fate of our world. The educationally sustainable nature of the project becomes apparent years later, when the pupils involved have left school, but still talk about the progress of the "Rainforest of the Austrians" in Costa Rica.

Long-term CO2 fertilization increases vegetation productivity and has little effect on hydrological partitioning in tropical rainforests

NASA Astrophysics Data System (ADS)

Yang, Yuting; Donohue, Randall J.; McVicar, Tim R.; Roderick, Michael L.; Beck, Hylke E.

2016-08-01

Understanding how tropical rainforests respond to elevated atmospheric CO2 concentration (eCO2) is essential for predicting Earth's carbon, water, and energy budgets under future climate change. Here we use long-term (1982-2010) precipitation (P) and runoff (Q) measurements to infer runoff coefficient (Q/P) and evapotranspiration (E) trends across 18 unimpaired tropical rainforest catchments. We complement that analysis by using satellite observations coupled with ecosystem process modeling (using both "top-down" and "bottom-up" perspectives) to examine trends in carbon uptake and relate that to the observed changes in Q/P and E. Our results show there have been only minor changes in the satellite-observed canopy leaf area over 1982-2010, suggesting that eCO2 has not increased vegetation leaf area in tropical rainforests and therefore any plant response to eCO2 occurs at the leaf level. Meanwhile, observed Q/P and E also remained relatively constant in the 18 catchments, implying an unchanged hydrological partitioning and thus approximately conserved transpiration under eCO2. For the same period, using a top-down model based on gas exchange theory, we predict increases in plant assimilation (A) and light use efficiency (ɛ) at the leaf level under eCO2, the magnitude of which is essentially that of eCO2 (i.e., 12% over 1982-2010). Simulations from 10 state-of-the-art bottom-up ecosystem models over the same catchments also show that the direct effect of eCO2 is to mostly increase A and ɛ with little impact on E. Our findings add to the current limited pool of knowledge regarding the long-term eCO2 impacts in tropical rainforests.

Age-class differences in shoot photosynthesis and water relations of Fraser fir (Abies fraseri), southern Appalachian Mountains, USA

Treesearch

Keith Reinhardt; Daniel M. Johnson; William K. Smith

2009-01-01

Fraser fir (Abies fraseri (Pursh) Poir.) is an endemic tree species found only in refugial mountain-top forests in the southern Appalachian Mountains, USA. Very few studies have investigated the ecophysiology of this species in its natural environment. We measured and compared photosynthetic gas exchange and water relations of understory germinant...

Continuity of brown bear maternal lineages in northern England through the Last-glacial period

NASA Astrophysics Data System (ADS)

Edwards, Ceiridwen J.; Ho, Simon Y. W.; Barnett, Ross; Coxon, Peter; Bradley, Daniel G.; Lord, Tom C.; O'Connor, Terry

2014-07-01

Brown bears recolonised Europe rapidly after the Last Glacial Maximum (LGM), but there has been debate about whether bear populations were confined to separate glacial refugia in southern Europe, or if there was continuous gene flow among groups. To look in more detail at recolonisation routes into the British Isles after the LGM, 16 brown bear (Ursus arctos) samples from Lateglacial Yorkshire were analysed for mitochondrial DNA survival. The resulting data were compared with earlier work on Late Pleistocene and Holocene bears from Ireland (Edwards et al., 2011), as well as with both modern and ancient bears from across continental Europe. The results highlight the temporal and spatial continuity of brown bear maternal lineages through the Lateglacial period in northern England. While this region was not a refugial area in the LGM for the Irish Clade 2 brown bears, our data suggest that populations of brown bear in England did act as refugial sources for the later colonisation of Ireland, by Clade 1-i bears, during the Holocene. Our results contribute to a wider understanding of the phylogenetic relationships of brown bears through the Late Quaternary, and lend a valuable perspective on bear migration into peripheral Europe.

(En)Countering Social and Environmental Messages in the Rainforest Cafe [sic], Children's Picturebooks, and Other Visual Culture Sites

ERIC Educational Resources Information Center

Reisberg, Mira; Han, Sandrine

2009-01-01

Our study critically examines social and environmental messages in a range of visual sites educating about rainforest environments. We focus primarily on the Rainforest Cafe, an international series of rainforest-themed edutainment restaurant/stores, whose inherent contradictions between consumption and conservation are quite disturbing when…

Tropical Rainforests: A Case Study of UK, 13-Year-Olds' Knowledge and Understanding of These Environments

ERIC Educational Resources Information Center

Dove, Jane

2012-01-01

Tropical rainforests are biologically rich ecosystems, which are threatened by a variety of different human activities. This study focuses on students' knowledge and understanding of rainforest locations, their reasons for protecting these environments and their familiarity with selected concepts about rainforest vegetation and soil. These…

Patterns of Phylogenetic Diversity of Subtropical Rainforest of the Great Sandy Region, Australia Indicate Long Term Climatic Refugia.

PubMed

Howard, Marion G; McDonald, William J F; Forster, Paul I; Kress, W John; Erickson, David; Faith, Daniel P; Shapcott, Alison

2016-01-01

Australia's Great Sandy Region is of international significance containing two World Heritage areas and patches of rainforest growing on white sand. Previous broad-scale analysis found the Great Sandy biogeographic subregion contained a significantly more phylogenetically even subset of species than expected by chance contrasting with rainforest on white sand in Peru. This study aimed to test the patterns of rainforest diversity and relatedness at a finer scale and to investigate why we may find different patterns of phylogenetic evenness compared with rainforests on white sands in other parts of the world. This study focussed on rainforest sites within the Great Sandy and surrounding areas in South East Queensland (SEQ), Australia. We undertook field collections, expanded our three-marker DNA barcode library of SEQ rainforest plants and updated the phylogeny to 95% of the SEQ rainforest flora. We sampled species composition of rainforest in fixed area plots from 100 sites. We calculated phylogenetic diversity (PD) measures as well as species richness (SR) for each rainforest community. These combined with site variables such as geology, were used to evaluate patterns and relatedness. We found that many rainforest communities in the Great Sandy area were significantly phylogenetically even at the individual site level consistent with a broader subregion analysis. Sites from adjacent areas were either not significant or were significantly phylogenetically clustered. Some results in the neighbouring areas were consistent with historic range expansions. In contrast with expectations, sites located on the oldest substrates had significantly lower phylogenetic diversity (PD). Fraser Island was once connected to mainland Australia, our results are consistent with a region geologically old enough to have continuously supported rainforest in refugia. The interface of tropical and temperate floras in part also explains the significant phylogenetic evenness and higher than expected phylogenetic diversity.

Patterns of Phylogenetic Diversity of Subtropical Rainforest of the Great Sandy Region, Australia Indicate Long Term Climatic Refugia

PubMed Central

Howard, Marion G.; McDonald, William J. F.; Forster, Paul I.; Kress, W. John; Erickson, David; Faith, Daniel P.; Shapcott, Alison

2016-01-01

Australia’s Great Sandy Region is of international significance containing two World Heritage areas and patches of rainforest growing on white sand. Previous broad-scale analysis found the Great Sandy biogeographic subregion contained a significantly more phylogenetically even subset of species than expected by chance contrasting with rainforest on white sand in Peru. This study aimed to test the patterns of rainforest diversity and relatedness at a finer scale and to investigate why we may find different patterns of phylogenetic evenness compared with rainforests on white sands in other parts of the world. This study focussed on rainforest sites within the Great Sandy and surrounding areas in South East Queensland (SEQ), Australia. We undertook field collections, expanded our three-marker DNA barcode library of SEQ rainforest plants and updated the phylogeny to 95% of the SEQ rainforest flora. We sampled species composition of rainforest in fixed area plots from 100 sites. We calculated phylogenetic diversity (PD) measures as well as species richness (SR) for each rainforest community. These combined with site variables such as geology, were used to evaluate patterns and relatedness. We found that many rainforest communities in the Great Sandy area were significantly phylogenetically even at the individual site level consistent with a broader subregion analysis. Sites from adjacent areas were either not significant or were significantly phylogenetically clustered. Some results in the neighbouring areas were consistent with historic range expansions. In contrast with expectations, sites located on the oldest substrates had significantly lower phylogenetic diversity (PD). Fraser Island was once connected to mainland Australia, our results are consistent with a region geologically old enough to have continuously supported rainforest in refugia. The interface of tropical and temperate floras in part also explains the significant phylogenetic evenness and higher than expected phylogenetic diversity. PMID:27119149

Attraction of Chagas disease vectors (Triatominae) to artificial light sources in the canopy of primary Amazon rainforest.

PubMed

Castro, Marcelo C M; Barrett, Toby V; Santos, Walter S; Abad-Franch, Fernando; Rafael, José A

2010-12-01

Adult triatomines occasionally fly into artificially lit premises in Amazonia. This can result in Trypanosoma cruzi transmission to humans either by direct contact or via foodstuff contamination, but the frequency of such behaviour has not been quantified. To address this issue, a light-trap was set 45 m above ground in primary rainforest near Manaus, state of Amazonas, Brazil and operated monthly for three consecutive nights over the course of one year (432 trap-hours). The most commonly caught reduviids were triatomines, including 38 Panstrongylus geniculatus, nine Panstrongylus lignarius, three Panstrongylus rufotuberculatus, five Rhodnius robustus, two Rhodnius pictipes, one Rhodnius amazonicus and 17 Eratyrus mucronatus. Males were collected more frequently than females. The only month without any catches was May. Attraction of most of the known local T. cruzi vectors to artificial light sources is common and year-round in the Amazon rainforest, implying that they may often invade premises built near forest edges and thus become involved in disease transmission. Consequently, effective Chagas disease prevention in Amazonia will require integrating entomological surveillance with the currently used epidemiological surveillance.

Changes in Structure and Functioning of Protist (Testate Amoebae) Communities Due to Conversion of Lowland Rainforest into Rubber and Oil Palm Plantations.

PubMed

Krashevska, Valentyna; Klarner, Bernhard; Widyastuti, Rahayu; Maraun, Mark; Scheu, Stefan

2016-01-01

Large areas of tropical rainforest are being converted to agricultural and plantation land uses, but little is known of biodiversity and ecological functioning under these replacement land uses. We investigated the effects of conversion of rainforest into jungle rubber, intensive rubber and oil palm plantations on testate amoebae, diverse and functionally important protists in litter and soil. Living testate amoebae species richness, density and biomass were all lower in replacement land uses than in rainforest, with the impact being more pronounced in litter than in soil. Similar abundances of species of high and low trophic level in rainforest suggest that trophic interactions are more balanced, with a high number of functionally redundant species, than in rubber and oil palm. In contrast, plantations had a low density of high trophic level species indicating losses of functions. This was particularly so in oil palm plantations. In addition, the relative density of species with siliceous shells was >50% lower in the litter layer of oil palm and rubber compared to rainforest and jungle rubber. This difference suggests that rainforest conversion changes biogenic silicon pools and increases silicon losses. Overall, the lower species richness, density and biomass in plantations than in rainforest, and the changes in the functional composition of the testate amoebae community, indicate detrimental effects of rainforest conversion on the structure and functioning of microbial food webs.

Adaptation linguistique et culturelle: L'experience des refugies d'Asie du sud-est au Quebec (Linguistic and Cultural Adaptation: The Experience of Southeast Asian Refugees in Quebec).

ERIC Educational Resources Information Center

Chan, Kwok B.; Dorais, Louis-Jacques

A collection of papers, in English and French, on the adjustment processes and problems of Southeast Asian refugees in Quebec includes: "Prelude to Resettlement: A Clinical View on the Transit Camp Experience of Vietnamese Refugees" (David Loveridge, Kwok B. Chan); "Une communaute culturelle en situation de diglossie: Les…

Plant traits demonstrate that temperate and tropical giant eucalypt forests are ecologically convergent with rainforest not savanna.

PubMed

Tng, David Y P; Jordan, Greg J; Bowman, David M J S

2013-01-01

Ecological theory differentiates rainforest and open vegetation in many regions as functionally divergent alternative stable states with transitional (ecotonal) vegetation between the two forming transient unstable states. This transitional vegetation is of considerable significance, not only as a test case for theories of vegetation dynamics, but also because this type of vegetation is of major economic importance, and is home to a suite of species of conservation significance, including the world's tallest flowering plants. We therefore created predictions of patterns in plant functional traits that would test the alternative stable states model of these systems. We measured functional traits of 128 trees and shrubs across tropical and temperate rainforest - open vegetation transitions in Australia, with giant eucalypt forests situated between these vegetation types. We analysed a set of functional traits: leaf carbon isotopes, leaf area, leaf mass per area, leaf slenderness, wood density, maximum height and bark thickness, using univariate and multivariate methods. For most traits, giant eucalypt forest was similar to rainforest, while rainforest, particularly tropical rainforest, was significantly different from the open vegetation. In multivariate analyses, tropical and temperate rainforest diverged functionally, and both segregated from open vegetation. Furthermore, the giant eucalypt forests overlapped in function with their respective rainforests. The two types of giant eucalypt forests also exhibited greater overall functional similarity to each other than to any of the open vegetation types. We conclude that tropical and temperate giant eucalypt forests are ecologically and functionally convergent. The lack of clear functional differentiation from rainforest suggests that giant eucalypt forests are unstable states within the basin of attraction of rainforest. Our results have important implications for giant eucalypt forest management.

Plant Traits Demonstrate That Temperate and Tropical Giant Eucalypt Forests Are Ecologically Convergent with Rainforest Not Savanna

PubMed Central

Tng, David Y. P.; Jordan, Greg J.; Bowman, David M. J. S.

2013-01-01

Ecological theory differentiates rainforest and open vegetation in many regions as functionally divergent alternative stable states with transitional (ecotonal) vegetation between the two forming transient unstable states. This transitional vegetation is of considerable significance, not only as a test case for theories of vegetation dynamics, but also because this type of vegetation is of major economic importance, and is home to a suite of species of conservation significance, including the world’s tallest flowering plants. We therefore created predictions of patterns in plant functional traits that would test the alternative stable states model of these systems. We measured functional traits of 128 trees and shrubs across tropical and temperate rainforest – open vegetation transitions in Australia, with giant eucalypt forests situated between these vegetation types. We analysed a set of functional traits: leaf carbon isotopes, leaf area, leaf mass per area, leaf slenderness, wood density, maximum height and bark thickness, using univariate and multivariate methods. For most traits, giant eucalypt forest was similar to rainforest, while rainforest, particularly tropical rainforest, was significantly different from the open vegetation. In multivariate analyses, tropical and temperate rainforest diverged functionally, and both segregated from open vegetation. Furthermore, the giant eucalypt forests overlapped in function with their respective rainforests. The two types of giant eucalypt forests also exhibited greater overall functional similarity to each other than to any of the open vegetation types. We conclude that tropical and temperate giant eucalypt forests are ecologically and functionally convergent. The lack of clear functional differentiation from rainforest suggests that giant eucalypt forests are unstable states within the basin of attraction of rainforest. Our results have important implications for giant eucalypt forest management. PMID:24358359

Future distribution of tundra refugia in northern Alaska

USGS Publications Warehouse

Hope, Andrew G.; Waltari, Eric; Payer, David C.; Cook, Joseph A.; Talbot, Sandra L.

2013-01-01

Climate change in the Arctic is a growing concern for natural resource conservation and management as a result of accelerated warming and associated shifts in the distribution and abundance of northern species. We introduce a predictive framework for assessing the future extent of Arctic tundra and boreal biomes in northern Alaska. We use geo-referenced museum specimens to predict the velocity of distributional change into the next century and compare predicted tundra refugial areas with current land-use. The reliability of predicted distributions, including differences between fundamental and realized niches, for two groups of species is strengthened by fossils and genetic signatures of demographic shifts. Evolutionary responses to environmental change through the late Quaternary are generally consistent with past distribution models. Predicted future refugia overlap managed areas and indicate potential hotspots for tundra diversity. To effectively assess future refugia, variable responses among closely related species to climate change warrants careful consideration of both evolutionary and ecological histories.

Changes in Structure and Functioning of Protist (Testate Amoebae) Communities Due to Conversion of Lowland Rainforest into Rubber and Oil Palm Plantations

PubMed Central

Krashevska, Valentyna; Klarner, Bernhard; Widyastuti, Rahayu; Maraun, Mark; Scheu, Stefan

2016-01-01

Large areas of tropical rainforest are being converted to agricultural and plantation land uses, but little is known of biodiversity and ecological functioning under these replacement land uses. We investigated the effects of conversion of rainforest into jungle rubber, intensive rubber and oil palm plantations on testate amoebae, diverse and functionally important protists in litter and soil. Living testate amoebae species richness, density and biomass were all lower in replacement land uses than in rainforest, with the impact being more pronounced in litter than in soil. Similar abundances of species of high and low trophic level in rainforest suggest that trophic interactions are more balanced, with a high number of functionally redundant species, than in rubber and oil palm. In contrast, plantations had a low density of high trophic level species indicating losses of functions. This was particularly so in oil palm plantations. In addition, the relative density of species with siliceous shells was >50% lower in the litter layer of oil palm and rubber compared to rainforest and jungle rubber. This difference suggests that rainforest conversion changes biogenic silicon pools and increases silicon losses. Overall, the lower species richness, density and biomass in plantations than in rainforest, and the changes in the functional composition of the testate amoebae community, indicate detrimental effects of rainforest conversion on the structure and functioning of microbial food webs. PMID:27463805

The changing role of fire in conifer-dominated temperate rainforest through the last 14,000 years

NASA Astrophysics Data System (ADS)

Fletcher, M.-S.; Bowman, D. M. J. S.; Whitlock, C.; Mariani, M.; Stahle, L.

2018-02-01

Climate, fire and vegetation dynamics are often tightly coupled through time. Here, we use a 14 kyr sedimentary charcoal and pollen record from Lake Osborne, Tasmania, Australia, to explore how this relationship changes under varying climatic regimes within a temperate rainforest ecosystem. Superposed epoch analysis reveals a significant relationship between fire and vegetation change throughout the Holocene at our site. Our data indicates an initial resilience of the rainforest system to fire under a stable cool and humid climate regime between ca. 12-6 ka. In contrast, fires that occurred after 6 ka, under an increasingly variable climate regime wrought by the onset of the El Niño-Southern Oscillation (ENSO), resulted in a series of changes within the local rainforest vegetation that culminated in the replacement of rainforest by fire-promoted Eucalypt forest. We suggest that an increasingly variable ENSO-influenced climate regime inhibited rainforest recovery from fire because of slower growth, reduced fecundity and increased fire frequency, thus contributing to the eventual collapse of the rainforest system.

A new skink (Scincidae: Carlia) from the rainforest uplands of Cape Melville, north-east Australia.

PubMed

Hoskin, Conrad J

2014-10-01

Carlia skinks are widespread in New Guinea, Wallacea, and northern and eastern Australia. Most Australian species occur in dry woodlands and savannas or marginal rainforest habitats associated with these. There are two rainforest species, parapatrically distributed in coastal mid-eastern Queensland (C. rhomboidalis) and the Wet Tropics of north-eastern Queensland (C. rubrigularis). These two sister species share a diagnostic morphological trait in having the interparietal scale fused to the frontoparietal. Here I describe a third species in this group, Carlia wundalthini sp. nov., from rainforest uplands of the Melville Range, a rainforest isolate 170 km north of the Wet Tropics. This species is diagnosable on male breeding colouration, morphometrics and scalation. The description of C. wundalthini sp. nov. brings the number of vertebrate species known to be endemic to the rainforest and boulder-fields of Cape Melville to seven. Carlia wundalthini sp. nov. is distinct among these endemics in being the only one that does not appear to be directly associated with rock, being found in rainforest leaf-litter. 

A climate change context for the decline of a foundation tree species in south-western Australia: insights from phylogeography and species distribution modelling.

PubMed

Dalmaris, Eleftheria; Ramalho, Cristina E; Poot, Pieter; Veneklaas, Erik J; Byrne, Margaret

2015-11-01

A worldwide increase in tree decline and mortality has been linked to climate change and, where these represent foundation species, this can have important implications for ecosystem functions. This study tests a combined approach of phylogeographic analysis and species distribution modelling to provide a climate change context for an observed decline in crown health and an increase in mortality in Eucalyptus wandoo, an endemic tree of south-western Australia. Phylogeographic analyses were undertaken using restriction fragment length polymorphism analysis of chloroplast DNA in 26 populations across the species distribution. Parsimony analysis of haplotype relationships was conducted, a haplotype network was prepared, and haplotype and nucleotide diversity were calculated. Species distribution modelling was undertaken using Maxent models based on extant species occurrences and projected to climate models of the last glacial maximum (LGM). A structured pattern of diversity was identified, with the presence of two groups that followed a climatic gradient from mesic to semi-arid regions. Most populations were represented by a single haplotype, but many haplotypes were shared among populations, with some having widespread distributions. A putative refugial area with high haplotype diversity was identified at the centre of the species distribution. Species distribution modelling showed high climatic suitability at the LGM and high climatic stability in the central region where higher genetic diversity was found, and low suitability elsewhere, consistent with a pattern of range contraction. Combination of phylogeography and paleo-distribution modelling can provide an evolutionary context for climate-driven tree decline, as both can be used to cross-validate evidence for refugia and contraction under harsh climatic conditions. This approach identified a central refugial area in the test species E. wandoo, with more recent expansion into peripheral areas from where it had contracted at the LGM. This signature of contraction from lower rainfall areas is consistent with current observations of decline on the semi-arid margin of the range, and indicates low capacity to tolerate forecast climatic change. Identification of a paleo-historical context for current tree decline enables conservation interventions to focus on maintaining genetic diversity, which provides the evolutionary potential for adaptation to climate change. © The Author 2015. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Outbreaks of cholera-like diarrhoea caused by enterotoxigenic Escherichia coli in the Brazilian Amazon Rainforest.

PubMed

Vicente, Ana C P; Teixeira, Luiz F M; Iniguez-Rojas, L; Luna, M G; Silva, L; Andrade, J R C; Guth, B E C

2005-09-01

The relationship between enteropathogens and severe diarrhoea in the Brazilian Amazon is poorly understood. In 1998, outbreaks of acute diarrhoea clinically diagnosed as cholera occurred in two small villages localized far from the main cholera route in the Brazilian rainforest. PCR was performed on some enteropathogens and heat-labile (LT) and/or heat-stable (STh) toxin genes, the virulence determinants of enterotoxigenic Escherichia coli (ETEC), were detected. Further characterization of ETEC isolates revealed the presence of two clones, one from each outbreak. One presenting serotype O167:H5 harboured LT-I and STh toxin genes and expressed the CS5CS6 colonization factor. The other, a non-typeable serotype, was positive for the LT-I gene and expressed the CS7 colonization factor. The current study demonstrates the importance of molecular diagnosis in regions such as the Amazon basin, where the enormous distances and local support conditions make standard laboratory diagnosis difficult. Here we also show that the mis-identified cholera cases were in fact associated with ETEC strains. This is the first report of ETEC, molecularly characterized as the aetiological agent of severe diarrhoea in children and adults in the Brazilian Amazon Rainforest.

'Tales of Symphonia': extinction dynamics in response to past climate change in Madagascan rainforests.

PubMed

Virah-Sawmy, Malika; Bonsall, Michael B; Willis, Katherine J

2009-12-23

Madagascar's rainforests are among the most biodiverse in the world. Understanding the population dynamics of important species within these forests in response to past climatic variability provides valuable insight into current and future species composition. Here, we use a population-level approach to analyse palaeoecological records over the last 5300 years to understand how populations of Symphonia cf. verrucosa became locally extinct in some rainforest fragments along the southeast coast of Madagascar in response to rapid climate change, yet persisted in others. Our results indicate that regional (climate) variability contributed to synchronous decline of S. cf. verrucosa populations in these forests. Superimposed on regional fluctuations were local processes that could have contributed or mitigated extinction. Specifically, in the forest with low soil nutrients, population model predictions indicated that there was coexistence between S. cf. verrucosa and Erica spp., but in the nutrient-rich forest, interspecific effects between Symphonia and Erica spp. may have pushed Symphonia to extinction at the peak of climatic change. We also demonstrate that Symphonia is a good indicator of a threshold event, exhibiting erratic fluctuations prior to and long after the critical climatic point has passed.

Effects of land use on surface–atmosphere exchanges of trace gases and energy in Borneo: comparing fluxes over oil palm plantations and a rainforest

PubMed Central

Fowler, David; Nemitz, Eiko; Misztal, Pawel; Di Marco, Chiara; Skiba, Ute; Ryder, James; Helfter, Carole; Cape, J. Neil; Owen, Sue; Dorsey, James; Gallagher, Martin W.; Coyle, Mhairi; Phillips, Gavin; Davison, Brian; Langford, Ben; MacKenzie, Rob; Muller, Jennifer; Siong, Jambery; Dari-Salisburgo, Cesare; Di Carlo, Piero; Aruffo, Eleonora; Giammaria, Franco; Pyle, John A.; Hewitt, C. Nicholas

2011-01-01

This paper reports measurements of land–atmosphere fluxes of sensible and latent heat, momentum, CO2, volatile organic compounds (VOCs), NO, NO2, N2O and O3 over a 30 m high rainforest canopy and a 12 m high oil palm plantation in the same region of Sabah in Borneo between April and July 2008. The daytime maximum CO2 flux to the two canopies differs by approximately a factor of 2, 1200 mg C m−2 h−1 for the oil palm and 700 mg C m−2 h−1 for the rainforest, with the oil palm plantation showing a substantially greater quantum efficiency. Total VOC emissions are also larger over the oil palm than over the rainforest by a factor of 3. Emissions of isoprene from the oil palm canopy represented 80 per cent of the VOC emissions and exceeded those over the rainforest in similar light and temperature conditions by on average a factor of 5. Substantial emissions of estragole (1-allyl-4-methoxybenzene) from the oil palm plantation were detected and no trace of this VOC was detected in or above the rainforest. Deposition velocities for O3 to the rainforest were a factor of 2 larger than over oil palm. Emissions of nitrous oxide were larger from the soils of the oil palm plantation than from the soils of the rainforest by approximately 25 per cent. It is clear from the measurements that the large change in the species composition generated by replacing rainforest with oil palm leads to profound changes in the net exchange of most of the trace gases measured, and thus on the chemical composition of the boundary layer over these surfaces. PMID:22006962

Effects of land use on surface-atmosphere exchanges of trace gases and energy in Borneo: comparing fluxes over oil palm plantations and a rainforest.

PubMed

Fowler, David; Nemitz, Eiko; Misztal, Pawel; Di Marco, Chiara; Skiba, Ute; Ryder, James; Helfter, Carole; Cape, J Neil; Owen, Sue; Dorsey, James; Gallagher, Martin W; Coyle, Mhairi; Phillips, Gavin; Davison, Brian; Langford, Ben; MacKenzie, Rob; Muller, Jennifer; Siong, Jambery; Dari-Salisburgo, Cesare; Di Carlo, Piero; Aruffo, Eleonora; Giammaria, Franco; Pyle, John A; Hewitt, C Nicholas

2011-11-27

This paper reports measurements of land-atmosphere fluxes of sensible and latent heat, momentum, CO(2), volatile organic compounds (VOCs), NO, NO(2), N(2)O and O(3) over a 30 m high rainforest canopy and a 12 m high oil palm plantation in the same region of Sabah in Borneo between April and July 2008. The daytime maximum CO(2) flux to the two canopies differs by approximately a factor of 2, 1200 mg C m(-2) h(-1) for the oil palm and 700 mg C m(-2) h(-1) for the rainforest, with the oil palm plantation showing a substantially greater quantum efficiency. Total VOC emissions are also larger over the oil palm than over the rainforest by a factor of 3. Emissions of isoprene from the oil palm canopy represented 80 per cent of the VOC emissions and exceeded those over the rainforest in similar light and temperature conditions by on average a factor of 5. Substantial emissions of estragole (1-allyl-4-methoxybenzene) from the oil palm plantation were detected and no trace of this VOC was detected in or above the rainforest. Deposition velocities for O(3) to the rainforest were a factor of 2 larger than over oil palm. Emissions of nitrous oxide were larger from the soils of the oil palm plantation than from the soils of the rainforest by approximately 25 per cent. It is clear from the measurements that the large change in the species composition generated by replacing rainforest with oil palm leads to profound changes in the net exchange of most of the trace gases measured, and thus on the chemical composition of the boundary layer over these surfaces.

Past Human Disturbance Effects upon Biodiversity are Greatest in the Canopy; A Case Study on Rainforest Butterflies.

PubMed

Whitworth, Andrew; Villacampa, Jaime; Brown, Alice; Huarcaya, Ruthmery Pillco; Downie, Roger; MacLeod, Ross

2016-01-01

A key part of tropical forest spatial complexity is the vertical stratification of biodiversity, with widely differing communities found in higher rainforest strata compared to terrestrial levels. Despite this, our understanding of how human disturbance may differentially affect biodiversity across vertical strata of tropical forests has been slow to develop. For the first time, how the patterns of current biodiversity vary between three vertical strata within a single forest, subject to three different types of historic anthropogenic disturbance, was directly assessed. In total, 229 species of butterfly were detected, with a total of 5219 individual records. Butterfly species richness, species diversity, abundance and community evenness differed markedly between vertical strata. We show for the first time, for any group of rainforest biodiversity, that different vertical strata within the same rainforest, responded differently in areas with different historic human disturbance. Differences were most notable within the canopy. Regenerating forest following complete clearance had 47% lower canopy species richness than regenerating forest that was once selectively logged, while the reduction in the mid-storey was 33% and at ground level, 30%. These results also show for the first time that even long term regeneration (over the course of 30 years) may be insufficient to erase differences in biodiversity linked to different types of human disturbance. We argue, along with other studies, that ignoring the potential for more pronounced effects of disturbance on canopy fauna, could lead to the underestimation of the effects of habitat disturbance on biodiversity, and thus the overestimation of the conservation value of regenerating forests more generally.

Past Human Disturbance Effects upon Biodiversity are Greatest in the Canopy; A Case Study on Rainforest Butterflies

PubMed Central

Whitworth, Andrew; Villacampa, Jaime; Brown, Alice; Huarcaya, Ruthmery Pillco; Downie, Roger; MacLeod, Ross

2016-01-01

A key part of tropical forest spatial complexity is the vertical stratification of biodiversity, with widely differing communities found in higher rainforest strata compared to terrestrial levels. Despite this, our understanding of how human disturbance may differentially affect biodiversity across vertical strata of tropical forests has been slow to develop. For the first time, how the patterns of current biodiversity vary between three vertical strata within a single forest, subject to three different types of historic anthropogenic disturbance, was directly assessed. In total, 229 species of butterfly were detected, with a total of 5219 individual records. Butterfly species richness, species diversity, abundance and community evenness differed markedly between vertical strata. We show for the first time, for any group of rainforest biodiversity, that different vertical strata within the same rainforest, responded differently in areas with different historic human disturbance. Differences were most notable within the canopy. Regenerating forest following complete clearance had 47% lower canopy species richness than regenerating forest that was once selectively logged, while the reduction in the mid-storey was 33% and at ground level, 30%. These results also show for the first time that even long term regeneration (over the course of 30 years) may be insufficient to erase differences in biodiversity linked to different types of human disturbance. We argue, along with other studies, that ignoring the potential for more pronounced effects of disturbance on canopy fauna, could lead to the underestimation of the effects of habitat disturbance on biodiversity, and thus the overestimation of the conservation value of regenerating forests more generally. PMID:26950438

Structure, Function and Floristic Relationships of Plant Communities in Stressful Habitats Marginal to the Brazilian Atlantic Rainforest

PubMed Central

SCARANO, FABIO R.

2002-01-01

The Brazilian Atlantic rainforest consists of a typical tropical rainforest on mountain slopes, and stands out as a biodiversity hotspot for its high species richness and high level of species endemism. This forest is bordered by plant communities with lower species diversity, due mostly to more extreme environmental conditions than those found in the mesic rainforest. Between the mountain slopes and the sea, the coastal plains have swamp forests, dry semi‐deciduous forests and open thicket vegetation on marine sand deposits. At the other extreme, on top of the mountains (>2000 m a.s.l.), the rainforest is substituted by high altitude fields and open thicket vegetation on rocky outcrops. Thus, the plant communities that are marginal to the rainforest are subjected either to flooding, drought, oceanicity or cold winter temperatures. It was found that positive interactions among plants play an important role in the structuring and functioning of a swamp forest, a coastal sandy vegetation and a cold, high altitude vegetation in the state of Rio de Janeiro. Moreover, only a few species seem to adopt this positive role and, therefore, the functioning of these entire systems may rely on them. Curiously, these nurse plants are often epiphytes in the rainforest, and at the study sites are typically terrestrial. Many exhibit crassulacean acid metabolism. Conservation initiatives must treat the Atlantic coastal vegetation as a complex rather than a rainforest alone. PMID:12324276

Rainforest Conversion to Rubber Plantation May Not Result in Lower Soil Diversity of Bacteria, Fungi, and Nematodes.

PubMed

Kerfahi, Dorsaf; Tripathi, Binu M; Dong, Ke; Go, Rusea; Adams, Jonathan M

2016-08-01

Large areas of rainforest in Asia have been converted to plantations, with uncertain effects on soil biodiversity. Using standard metagenetic methods, we compared the soil biota of bacteria, fungi, and nematodes at three rainforest sites in Malaysia with two rubber plantation sites with similar soils and geology. We predicted the following: (1) that the rubber sites would have a lower α- and β-diversity than the rainforest sites, due to the monospecific canopy cover and intensive management with herbicides, pesticides, and fertilizers, and (2) that due to differences in the physical and biotic environment associated with cultivation, there would be distinct communities of bacteria, fungi, and nematodes. However, regarding (1), the results showed no consistent difference in α- and β-diversity of bacteria, fungi, or nematodes between rainforest and rubber plantation sites. It appears that conversion of rainforest to rubber plantations does not necessarily result in a decrease in diversity of soil biota. It may be that heterogeneity associated with the cultivation regimen compensates for loss of biotically imposed heterogeneity of the original rainforest. Regarding (2), as predicted there were statistically significant differences in community composition between rainforest and rubber plantation for bacteria, fungi, and nematodes. These differences could be related to a range of factors including light level, litter fall composition, pH, C and N, selecting a distinct set of soil taxa, and it is possible that this in itself would affect long-term soil function.

The Origins of Tropical Rainforest Hyperdiversity.

PubMed

Pennington, R Toby; Hughes, Mark; Moonlight, Peter W

2015-11-01

Traditional models for tropical species richness contrast rainforests as "museums" of old species or "cradles" of recent speciation. High plant species diversity in rainforests may be more likely to reflect high episodic evolutionary turnover of species--a scenario implicating high rates of both speciation and extinction through geological time.

On interception modelling of a lowland coastal rainforest in northern Queensland, Australia

NASA Astrophysics Data System (ADS)

Wallace, Jim; McJannet, Dave

2006-10-01

SummaryRecent studies of the water balance of tropical rainforests in northern Queensland have revealed that large fractions of rainfall, up to 30%, are intercepted by the canopy and lost as evaporation. These loss rates are much higher than those reported for continental rainforests, for example, in the Amazon basin, where interception is around 9% of rainfall. Higher interception losses have been found in coastal and mountain rainforests and substantial advection of energy during rainfall is proposed to account for these results. This paper uses a process based model of interception to analyse the interception losses at Oliver Creek, a lowland coastal rainforest site in northern Queensland with a mean annual rainfall of 3952 mm. The observed interception loss of 25% of rainfall for the period August 2001 to January 2004 can be reproduced by the model with a suitable choice of the three key controlling variables, the canopy storage capacity, mean rainfall rate and mean wet canopy evaporation rate. Our analyses suggest that the canopy storage capacity of the Oliver Creek rainforest is between 3.0 and 3.5 mm, higher than reported for most other rainforests. Despite the high canopy capacity at our site, the interception losses can only be accounted for with energy advection during rainfall in the range 40-70% of the incident energy.

A new skink (Scincidae: Saproscincus) from rocky rainforest habitat on Cape Melville, north-east Australia.

PubMed

Hoskin, Conrad J

2013-01-01

Saproscincus skinks are restricted to wet forest habitats of eastern Australia. Eleven species have previously been described, with most having small distributions in disjunct areas of subtropical and tropical rainforest. The localized distributions and specific habitat requirements of Saproscincus have made them a key group for understanding the biogeographic history of Australia's rainforests. Here I describe a new species of Saproscincus from the Melville Range on Cape Melville, north-east Australia. The Melville Range is composed of boulder-fields and areas of rainforest in the uplands, and is highly isolated from other areas of elevated rainforest. All individuals of the new species were found on a moist ridgeline, active on boulders under a rainforest canopy or on boulder-field immediately adjacent to rainforest. Saproscincus saltus sp. nov. is highly distinct in morphology and colour pattern. Of particular interest are its long limbs and digits compared to congeners, which in conjunction with the observed ecology, suggest a long history of association with rock. The discovery of S. saltus sp. nov. extends the distribution of the genus over 100 km north from the nearest congeners in the Wet Tropics region. This species brings the number of vertebrates known to be endemic to the Melville Range to six, which is remarkable for such a small area.

Modeling vegetation mosaics in sub-alpine Tasmania under various fire regimes

Treesearch

Gabriel I. Yospin; Samuel W. Wood; Andres Holz; David M. J. S. Bowman; Robert E. Keane; Cathy Whitlock

2015-01-01

Western Tasmania, Australia contains some of the highest levels of biological endemism of any temperate region in the world, including vegetation types that are conservation priorities: fire-sensitive rainforest dominated by endemic conifer species in the genus Athrotaxis; and firetolerant buttongrass moorlands. Current management focuses on fire suppression,...

Exploring the likelihood and mechanism of a climate-change-induced dieback of the Amazon rainforest

PubMed Central

Malhi, Yadvinder; Aragão, Luiz E. O. C.; Galbraith, David; Huntingford, Chris; Fisher, Rosie; Zelazowski, Przemyslaw; Sitch, Stephen; McSweeney, Carol; Meir, Patrick

2009-01-01

We examine the evidence for the possibility that 21st-century climate change may cause a large-scale “dieback” or degradation of Amazonian rainforest. We employ a new framework for evaluating the rainfall regime of tropical forests and from this deduce precipitation-based boundaries for current forest viability. We then examine climate simulations by 19 global climate models (GCMs) in this context and find that most tend to underestimate current rainfall. GCMs also vary greatly in their projections of future climate change in Amazonia. We attempt to take into account the differences between GCM-simulated and observed rainfall regimes in the 20th century. Our analysis suggests that dry-season water stress is likely to increase in E. Amazonia over the 21st century, but the region tends toward a climate more appropriate to seasonal forest than to savanna. These seasonal forests may be resilient to seasonal drought but are likely to face intensified water stress caused by higher temperatures and to be vulnerable to fires, which are at present naturally rare in much of Amazonia. The spread of fire ignition associated with advancing deforestation, logging, and fragmentation may act as nucleation points that trigger the transition of these seasonal forests into fire-dominated, low biomass forests. Conversely, deliberate limitation of deforestation and fire may be an effective intervention to maintain Amazonian forest resilience in the face of imposed 21st-century climate change. Such intervention may be enough to navigate E. Amazonia away from a possible “tipping point,” beyond which extensive rainforest would become unsustainable. PMID:19218454

Exploring the likelihood and mechanism of a climate-change-induced dieback of the Amazon rainforest.

PubMed

Malhi, Yadvinder; Aragão, Luiz E O C; Galbraith, David; Huntingford, Chris; Fisher, Rosie; Zelazowski, Przemyslaw; Sitch, Stephen; McSweeney, Carol; Meir, Patrick

2009-12-08

We examine the evidence for the possibility that 21st-century climate change may cause a large-scale "dieback" or degradation of Amazonian rainforest. We employ a new framework for evaluating the rainfall regime of tropical forests and from this deduce precipitation-based boundaries for current forest viability. We then examine climate simulations by 19 global climate models (GCMs) in this context and find that most tend to underestimate current rainfall. GCMs also vary greatly in their projections of future climate change in Amazonia. We attempt to take into account the differences between GCM-simulated and observed rainfall regimes in the 20th century. Our analysis suggests that dry-season water stress is likely to increase in E. Amazonia over the 21st century, but the region tends toward a climate more appropriate to seasonal forest than to savanna. These seasonal forests may be resilient to seasonal drought but are likely to face intensified water stress caused by higher temperatures and to be vulnerable to fires, which are at present naturally rare in much of Amazonia. The spread of fire ignition associated with advancing deforestation, logging, and fragmentation may act as nucleation points that trigger the transition of these seasonal forests into fire-dominated, low biomass forests. Conversely, deliberate limitation of deforestation and fire may be an effective intervention to maintain Amazonian forest resilience in the face of imposed 21st-century climate change. Such intervention may be enough to navigate E. Amazonia away from a possible "tipping point," beyond which extensive rainforest would become unsustainable.

Children's Perceptions of Rainforest Biodiversity: Which Animals Have the Lion's Share of Environmental Awareness?

PubMed Central

Foster, William A.

2008-01-01

Globally, natural ecosystems are being lost to agricultural land at an unprecedented rate. This land-use often results in significant reductions in abundance and diversity of the flora and fauna as well as alterations in their composition. Despite this, there is little public perception of which taxa are most important in terms of their total biomass, biodiversity or the ecosystem services they perform. Such awareness is important for conservation, as without appreciation of their value and conservation status, species are unlikely to receive adequate conservation protection. We investigated children's perceptions of rainforest biodiversity by asking primary-age children, visiting the University Museum of Zoology, Cambridge to draw their ideal rainforest. By recording the frequency at which children drew different climatic, structural, vegetative and faunal components of the rainforest, we were able to quantify children's understanding of a rainforest environment. We investigated children's perceptions of rainforest biodiversity by comparing the relative numbers of the taxa drawn with the actual contributions made by these taxa to total rainforest biomass and global biodiversity. We found that children have a sophisticated view of the rainforest, incorporating many habitat features and a diverse range of animals. However, some taxa were over-represented (particularly mammals, birds and reptiles) and others under-represented (particularly insects and annelids) relative to their contribution to total biomass and species richness. Scientists and naturalists must continue to emphasise the diversity and functional importance of lesser-known taxa through public communication and outdoor events to aid invertebrate conservation and to ensure that future generations are inspired to become naturalists themselves. PMID:18596931

Polycyclic selection system for the tropical rainforests of northern Australia

Treesearch

Glen T. Dale; Grahame B. Applegate

1992-01-01

The polycyclic selection logging system developed and practiced for many years in the tropical rainforests of north Queensland has been successful in integrating timber production with the protection of conservation values. The system has been used by the Queensland Forest Service to manage north Queensland rainforests. The Queensland system has considerable potential...

Rainforest Depiction in Children's Resources

ERIC Educational Resources Information Center

Dove, Jane

2011-01-01

This article analyses how rainforests are portrayed in children's resources. Twenty books and 12 websites on rainforests, designed for pupils aged between 9 and 14 years, were examined to determine the types and range of animals depicted and how plant life in general is portrayed. The most commonly depicted animal was the orang-utan and other…

Helmdon's First Rainforest

ERIC Educational Resources Information Center

Blackburn, Sue

2003-01-01

This article describes how Helmdon Primary School is transformed in a memorable learning experience. It started out as a simple idea, a whole-school art exhibition centred on the theme of a tropical rainforest. The focal point was to be a life-sized rainforest created using a variety of media in the school hall. The school wanted the children to…

Investigation of Propagation in Foliage Using Simulation Techniques

DTIC Science & Technology

2011-12-01

simulation models provide a rough approximation to radiowave propagation in an actual rainforest environment. Based on the simulated results, the...simulation models provide a rough approximation to radiowave propagation in an actual rainforest environment. Based on the simulated results, the path... Rainforest ...............................2 2. Electrical Properties of a Forest .........................................................3 B. OBJECTIVES OF

Discovering the Ancient Temperate Rainforest.

ERIC Educational Resources Information Center

Lindsay, Anne

1997-01-01

Two activities for grades 3 through 8 explore species adaptation and forestry issues in the North American rainforests. In one activity, students create imaginary species of plants or animals that are adapted for life in an ancient temperate rainforest. In the second activity, students role play groups affected by plans to log an area of the…

New species of Austropurcellia, cryptic short-range endemic mite harvestmen (Arachnida, Opiliones, Cyphophthalmi) from Australia’s Wet Tropics biodiversity hotspot

PubMed Central

Jay, Katya R.; Popkin-Hall, Zachary R.; Coblens, Michelle J.; Oberski, Jill T.; Sharma, Prashant P.; Boyer, Sarah L.

2016-01-01

Abstract The genus Austropurcellia is a lineage of tiny leaf-litter arachnids that inhabit tropical rainforests throughout the eastern coast of Queensland, Australia. The majority of their diversity is found within the Wet Tropics rainforests of northeast Queensland, an area known for its exceptionally high levels of biodiversity and endemism. Studying the biogeographic history of limited-dispersal invertebrates in the Wet Tropics can provide insight into the role of climatic changes such as rainforest contraction in shaping rainforest biodiversity patterns. Here we describe six new species of mite harvestmen from the Wet Tropics rainforests, identified using morphological data, and discuss the biogeography of Austropurcellia with distributions of all known species. With this taxonomic contribution, the majority of the known diversity of the genus has been documented. PMID:27199608

Slow recovery of tropical old-field rainforest regrowth and the value and limitations of active restoration.

PubMed

Shoo, Luke P; Freebody, Kylie; Kanowski, John; Catterall, Carla P

2016-02-01

There is current debate about the potential for secondary regrowth to rescue tropical forests from an otherwise inevitable cascade of biodiversity loss due to land clearing and scant evidence to test how well active restoration may accelerate recovery. We used site chronosequences to compare developmental trajectories of vegetation between self-organized (i.e., spontaneous) forest regrowth and biodiversity plantings (established for ecological restoration, with many locally native tree species at high density) in the Australian wet tropics uplands. Across 28 regrowth sites aged 1-59 years, some structural attributes reached reference rainforest levels within 40 years, whereas wood volume and most tested components of native plant species richness (classified by species' origins, family, and ecological functions) reached less than 50% of reference rainforest values. Development of native tree and shrub richness was particularly slow among species that were wind dispersed or animal dispersed with large (>10 mm) seeds. Many species with animal-dispersed seeds were from near-basal evolutionary lineages that contribute to recognized World Heritage values of the study region. Faster recovery was recorded in 25 biodiversity plantings of 1-25 years in which wood volume developed more rapidly; native woody plant species richness reached values similar to reference rainforest and was better represented across all dispersal modes; and species from near-basal plant families were better (although incompletely) represented. Plantings and regrowth showed slow recovery in species richness of vines and epiphytes and in overall resemblance to forest in species composition. Our results can inform decision making about when and where to invest in active restoration and provide strong evidence that protecting old-growth forest is crucially important for sustaining tropical biodiversity. © 2015 Society for Conservation Biology.

Diversification of Bromelioideae (Bromeliaceae) in the Brazilian Atlantic rainforest: A case study in Aechmea subgenus Ortgiesia.

PubMed

Goetze, Márcia; Schulte, Katharina; Palma-Silva, Clarisse; Zanella, Camila M; Büttow, Miriam V; Capra, Fernanda; Bered, Fernanda

2016-05-01

Aechmea subgenus Ortgiesia comprises ca. 20 species distributed in Brazil, Argentina, Paraguay, and Uruguay, with a center of diversity in the Brazilian Atlantic rainforest. We examined interspecific relationships of Ortgiesia based on Amplified Fragment Length Polymorphisms (AFLP). Ninety-six accessions belonging to 14 species of Ortgiesia were sampled, and genotyped with 11 AFLP primer combinations. The neighbor joining (NJ) tree depicted two main genetic groups within Aechmea subgenus Ortgiesia, and four subgroups. The NJ tree showed short internal branches, indicating an overall shallow genetic divergence among Ortgiesia species as expected for the recently radiated subfamily Bromelioideae. Our results suggest that hybridization and/or incomplete lineage sorting may have hampered the reconstruction of interspecific relationships in Aechmea subgenus Ortgiesia. The mapping of petal color (yellow, blue, pink, or white), inflorescence type (simple or compound), and inflorescence shape (ellipsoid, subcylindric, cylindric, or pyramidal) against the NJ tree indicated that these characters are of limited taxonomic use in Aechmea subgenus Ortgiesia due to homoplasy. An analysis of the current distribution of Ortgiesia identified the southern region of the Brazilian Atlantic rainforest, between latitudes of 26° and 27°S, as the center of diversity for the subgenus. Copyright © 2016 Elsevier Inc. All rights reserved.

An Ancient Divide in a Contiguous Rainforest: Endemic Earthworms in the Australian Wet Tropics.

PubMed

Moreau, Corrie S; Hugall, Andrew F; McDonald, Keith R; Jamieson, Barrie G M; Moritz, Craig

2015-01-01

Understanding the factors that shape current species diversity is a fundamental aim of ecology and evolutionary biology. The Australian Wet Tropics (AWT) are a system in which much is known about how the rainforests and the rainforest-dependent organisms reacted to late Pleistocene climate changes, but less is known about how events deeper in time shaped speciation and extinction in this highly endemic biota. We estimate the phylogeny of a species-rich endemic genus of earthworms (Terrisswalkerius) from the region. Using DEC and DIVA historical biogeography methods we find a strong signal of vicariance among known biogeographical sub-regions across the whole phylogeny, congruent with the phylogeography of less diverse vertebrate groups. Absolute dating estimates, in conjunction with relative ages of major biogeographic disjunctions across Australia, indicate that diversification in Terrisswalkerius dates back before the mid-Miocene shift towards aridification, into the Paleogene era of isolation of mesothermal Gondwanan Australia. For the Queensland endemic Terrisswalkerius earthworms, the AWT have acted as both a museum of biological diversity and as the setting for continuing geographically structured diversification. These results suggest that past events affecting organismal diversification can be concordant across phylogeographic to phylogenetic levels and emphasize the value of multi-scale analysis, from intra- to interspecies, for understanding the broad-scale processes that have shaped geographic diversity.

Rainforest metropolis casts 1,000-km defaunation shadow.

PubMed

Tregidgo, Daniel J; Barlow, Jos; Pompeu, Paulo S; de Almeida Rocha, Mayana; Parry, Luke

2017-08-08

Tropical rainforest regions are urbanizing rapidly, yet the role of emerging metropolises in driving wildlife overharvesting in forests and inland waters is unknown. We present evidence of a large defaunation shadow around a rainforest metropolis. Using interviews with 392 rural fishers, we show that fishing has severely depleted a large-bodied keystone fish species, tambaqui ( Colossoma macropomum ), with an impact extending over 1,000 km from the rainforest city of Manaus (population 2.1 million). There was strong evidence of defaunation within this area, including a 50% reduction in body size and catch rate (catch per unit effort). Our findings link these declines to city-based boats that provide rural fishers with reliable access to fish buyers and ice and likely impact rural fisher livelihoods and flooded forest biodiversity. This empirical evidence that urban markets can defaunate deep into rainforest wilderness has implications for other urbanizing socioecological systems.

The shaping of genetic variation in edge-of-range populations under past and future climate change

PubMed Central

Razgour, Orly; Juste, Javier; Ibáñez, Carlos; Kiefer, Andreas; Rebelo, Hugo; Puechmaille, Sébastien J; Arlettaz, Raphael; Burke, Terry; Dawson, Deborah A; Beaumont, Mark; Jones, Gareth; Wiens, John

2013-01-01

With rates of climate change exceeding the rate at which many species are able to shift their range or adapt, it is important to understand how future changes are likely to affect biodiversity at all levels of organisation. Understanding past responses and extent of niche conservatism in climatic tolerance can help predict future consequences. We use an integrated approach to determine the genetic consequences of past and future climate changes on a bat species, Plecotus austriacus. Glacial refugia predicted by palaeo-modelling match those identified from analyses of extant genetic diversity and model-based inference of demographic history. Former refugial populations currently contain disproportionately high genetic diversity, but niche conservatism, shifts in suitable areas and barriers to migration mean that these hotspots of genetic diversity are under threat from future climate change. Evidence of population decline despite recent northward migration highlights the need to conserve leading-edge populations for spearheading future range shifts. PMID:23890483

Biodiversity and Peace: Where Technology and Montessori Come Together in the Children's Eternal Rainforest, Costa Rica

ERIC Educational Resources Information Center

Norris, Jeff

2016-01-01

Jeff Norris, initially shocked by the Montessorians who are calling technology into question, states that technology can offer a means of development for the child who is concurrently supporting and learning from the rich and overpowering biodiversity of the rainforest. He speaks for the Children's Eternal Rainforest citizen's science as well as…

Increasing arboreality with altitude: a novel biogeographic dimension

PubMed Central

Scheffers, Brett R.; Phillips, Ben L.; Laurance, William F.; Sodhi, Navjot S.; Diesmos, Arvin; Williams, Stephen E.

2013-01-01

Biodiversity is spatially organized by climatic gradients across elevation and latitude. But do other gradients exist that might drive biogeographic patterns? Here, we show that rainforest's vertical strata provide climatic gradients much steeper than those offered by elevation and latitude, and biodiversity of arboreal species is organized along this gradient. In Philippine and Singaporean rainforests, we demonstrate that rainforest frogs tend to shift up in the rainforest strata as altitude increases. Moreover, a Philippine-wide dataset of frog distributions shows that frog assemblages become increasingly arboreal at higher elevations. Thus, increased arboreality with elevation at broad biogeographic scales mirrors patterns we observed at local scales. Our proposed ‘arboreality hypothesis’ suggests that the ability to exploit arboreal habitats confers the potential for larger geographical distributions because species can shift their location in the rainforest strata to compensate for shifts in temperature associated with elevation and latitude. This novel finding may help explain patterns of species richness and abundance wherever vegetation produces a vertical microclimatic gradient. Our results further suggest that global warming will ‘flatten’ the biodiversity in rainforests by pushing arboreal species towards the cooler and wetter ground. This ‘flattening’ could potentially have serious impacts on forest functioning and species survival. PMID:24026817

Understanding changes of stomatal conductance under different atmospheric humidity levels for different tropical rainforest species in Biosphere 2

NASA Astrophysics Data System (ADS)

Tornito, A. J. G.

2016-12-01

Understanding the dynamics of climate change is one of the biggest questions that scientists across the globe ask today. With understanding climate change comes the need to understand the ecological systems and how their biological and chemical processes contribute to climate change. As ocean ecosystems, rainforests are very productive systems and are responsible for most of the world's carbon budget. To maintain cooler conditions, tropical forests mitigate warming through evapotranspiration. The purpose of this project was to measure short-term plasticity by looking at stomatal conductance levels of different tropical rainforest species of plants in the rainforest, savannah, and desert habitats in the Biosphere 2 facility in Oracle, Arizona. It is known that stomatal conductance is affected by CO2, H2O, and light availability. It has been observed that temperature levels may not affect stomatal conductance because of the variability associated with it. Results indicated that there is a potential trend amongst these rainforest species when placed in different humidity percentage areas. By understanding stomatal conductance in response to humidity, we can better understand how productive rainforest systems are when humidity levels decrease, which may potentially occur as Earth undergoes global climate change.

Insects on flowers: The unexpectedly high biodiversity of flower-visiting beetles in a tropical rainforest canopy.

PubMed

Wardhaugh, Carl W; Stork, Nigel E; Edwards, Will; Grimbacher, Peter S

2013-01-01

Insect biodiversity peaks in tropical rainforest environments where a large but as yet unknown proportion of species are found in the canopy. While there has been a proliferation of insect biodiversity research undertaken in the rainforest canopy, most studies focus solely on insects that inhabit the foliage. In a recent paper, we examined the distribution of canopy insects across five microhabitats (mature leaves, new leaves, flowers, fruit and suspended dead wood) in an Australian tropical rainforest, showing that the density (per dry weight gram of microhabitat) of insects on flowers were ten to ten thousand times higher than on the leaves. Flowers also supported a much higher number of species than expected based on their contribution to total forest biomass. Elsewhere we show that most of these beetle species were specialized to flowers with little overlap in species composition between different canopy microhabitats. Here we expand our discussion of the implications of our results with respect to specialization and the generation of insect biodiversity in the rainforest canopy. Lastly, we identify future directions for research into the biodiversity and specialization of flower-visitors in complex tropical rainforests.

Increasing arboreality with altitude: a novel biogeographic dimension.

PubMed

Scheffers, Brett R; Phillips, Ben L; Laurance, William F; Sodhi, Navjot S; Diesmos, Arvin; Williams, Stephen E

2013-11-07

Biodiversity is spatially organized by climatic gradients across elevation and latitude. But do other gradients exist that might drive biogeographic patterns? Here, we show that rainforest's vertical strata provide climatic gradients much steeper than those offered by elevation and latitude, and biodiversity of arboreal species is organized along this gradient. In Philippine and Singaporean rainforests, we demonstrate that rainforest frogs tend to shift up in the rainforest strata as altitude increases. Moreover, a Philippine-wide dataset of frog distributions shows that frog assemblages become increasingly arboreal at higher elevations. Thus, increased arboreality with elevation at broad biogeographic scales mirrors patterns we observed at local scales. Our proposed 'arboreality hypothesis' suggests that the ability to exploit arboreal habitats confers the potential for larger geographical distributions because species can shift their location in the rainforest strata to compensate for shifts in temperature associated with elevation and latitude. This novel finding may help explain patterns of species richness and abundance wherever vegetation produces a vertical microclimatic gradient. Our results further suggest that global warming will 'flatten' the biodiversity in rainforests by pushing arboreal species towards the cooler and wetter ground. This 'flattening' could potentially have serious impacts on forest functioning and species survival.

Nematode Spatial and Ecological Patterns from Tropical and Temperate Rainforests

PubMed Central

Porazinska, Dorota L.; Giblin-Davis, Robin M.; Powers, Thomas O.; Thomas, W. Kelley

2012-01-01

Large scale diversity patterns are well established for terrestrial macrobiota (e.g. plants and vertebrates), but not for microscopic organisms (e.g. nematodes). Due to small size, high abundance, and extensive dispersal, microbiota are assumed to exhibit cosmopolitan distributions with no biogeographical patterns. This assumption has been extrapolated from local spatial scale studies of a few taxonomic groups utilizing morphological approaches. Recent molecularly-based studies, however, suggest something quite opposite. Nematodes are the most abundant metazoans on earth, but their diversity patterns are largely unknown. We conducted a survey of nematode diversity within three vertical strata (soil, litter, and canopy) of rainforests at two contrasting latitudes in the North American meridian (temperate: the Olympic National Forest, WA, U.S.A and tropical: La Selva Biological Station, Costa Rica) using standardized sampling designs and sample processing protocols. To describe nematode diversity, we applied an ecometagenetic approach using 454 pyrosequencing. We observed that: 1) nematode communities were unique without even a single common species between the two rainforests, 2) nematode communities were unique among habitats in both rainforests, 3) total species richness was 300% more in the tropical than in the temperate rainforest, 4) 80% of the species in the temperate rainforest resided in the soil, whereas only 20% in the tropics, 5) more than 90% of identified species were novel. Overall, our data provided no support for cosmopolitanism at both local (habitats) and large (rainforests) spatial scales. In addition, our data indicated that biogeographical patterns typical of macrobiota also exist for microbiota. PMID:22984536

Two new skinks (Scincidae: Glaphyromorphus) from rainforest habitats in north-eastern Australia.

PubMed

Hoskin, Conrad J; Couper, Patrick J

2014-09-29

Tropical rainforest is largely restricted in Australia to the fairly continuous Wet Tropics region and disconnected patches to the north on Cape York. The Wet Tropics is relatively well explored and studied, whereas the rainforests of Cape York have received less attention due to their remoteness. Here we describe two new species of Glaphyromorphus skinks from rainforest areas on Cape York. The two new species are most similar to each other and to G. fuscicaudis and G. nigricaudis, but both are readily diagnosed on numerous traits. Glaphyromorphus othelarrni sp. nov. is diagnosed from all similar species by its supralabial count (typically 8 vs 7), high number of subdigital lamellae beneath the 4th finger (14-15 vs < 14), and its relatively longer limbs. Glaphyromorphus nyanchupinta sp. nov. is diagnosed from all similar species by its small body size (max SVL = ~ 54 mm vs > 85 mm) and slender body shape, low number of subdigital lamellae beneath the 4th toe (17-20 vs generally 20 or more), and head and body pattern. Both species also differ from each other and similar congeners in other aspects of body shape, scalation and colour pattern. Glaphyromorphus othelarrni sp. nov. is restricted to boulder-strewn rainforest of the Melville Range, whilst Glaphyromorphus nyanchupinta sp. nov. is known only from upland rainforest in the McIlwraith Range. We discuss patterns of rainforest vertebrate endemism on Cape York, and the importance of lithorefugia in generating these.

Field-quantified responses of tropical rainforest aboveground productivity to increasing CO2 and climatic stress, 1997-2009

NASA Astrophysics Data System (ADS)

Clark, Deborah A.; Clark, David B.; Oberbauer, Steven F.

2013-06-01

A directional change in tropical-forest productivity, a large component in the global carbon budget, would affect the rate of increase in atmospheric carbon dioxide ([CO2]). One current hypothesis is that "CO2 fertilization" has been increasing tropical forest productivity. Some lines of evidence instead suggest climate-driven productivity declines. Relevant direct field observations remain extremely limited for this biome. Using a unique long-term record of annual field measurements, we assessed annual aboveground net primary productivity (ANPP) and its relation to climatic factors and [CO2] in a neotropical rainforest through 1997-2009. Over this 12 year period, annual productivity did not increase, as would be expected with a dominant CO2 fertilization effect. Instead, the negative responses of ANPP components to climatic stress far exceeded the small positive responses associated with increasing [CO2]. Annual aboveground biomass production was well explained (73%) by the independent negative effects of increasing minimum temperatures and greater dry-season water stress. The long-term records enable a first field-based estimate of the [CO2] response of tropical forest ANPP: 5.24 g m-2 yr-1 yr-1 (the summed [CO2]-associated increases in two of the four production components; the largest component, leaf litterfall, showed no [CO2] association). If confirmed by longer data series, such a small response from a fertile tropical rainforest would indicate that current global models overestimate the benefits from CO2 fertilization for this biome, where most forests' poorer nutrient status more strongly constrains productivity responses to increasing [CO2]. Given the rapidly intensifying warming across tropical regions, tropical forest productivity could sharply decline through coming decades.

West meets East: How do rainforest beetles become circum-Pacific? Evolutionary origin of Callipogon relictus and allied species (Cerambycidae: Prioninae) in the New and Old Worlds.

PubMed

Kim, Sangil; de Medeiros, Bruno A S; Byun, Bong-Kyu; Lee, Seunghwan; Kang, Jung-Hoon; Lee, Bongwoo; Farrell, Brian D

2018-08-01

The longhorn beetle genus Callipogon Audinet-Serville represents a small group of large wood-boring beetles whose distribution pattern exhibits a unique trans-Pacific disjunction between the East Asian temperate rainforest and the tropical rainforest of the Neotropics. To understand the biogeographic history underlying this circum-Pacific disjunct distribution, we reconstructed a molecular phylogeny of the subfamily Prioninae with extensive sampling of Callipogon using multilocus sequence data of 99 prionine and four parandrine samples (ingroups), together with two distant outgroup species. Our sampling of Callipogon includes 18 of the 24 currently accepted species, with complete representation of all species in our focal subgenera. Our phylogenetic analyses confirmed the purported affinity between the Palearctic Callipogon relictus and its Neotropical congeners. Furthermore, based on molecular dating under the fossilized birth-death (FBD) model with comprehensive fossil records and probabilistic ancestral range reconstructions, we estimated the crown group Callipogon to have originated in the Paleocene circa 60 million years ago (Ma) across the Neotropics and Eastern Palearctics. The divergence between the Palearctic C. relictus and its Neotropical congeners is explained as the result of a vicariance event following the demise of boreotropical forest across Beringia at the Eocene-Oligocene boundary. As C. relictus represents the unique relictual species that evidentiates the lineage's expansive ancient distribution, we evaluated its conservation importance through species distribution modelling. Though we estimated a range expansion for C. relictus by 2050, we emphasize a careful implementation of conservation programs towards the protection of primary forest across its current habitats, as the species remains highly vulnerable to habitat disturbance. Copyright © 2018 Elsevier Inc. All rights reserved.

A new isidiate species of Arthonia (Ascomycota: Arthoniaceae) from Costa Rica.

PubMed

Grube, Martin; Lücking, Robert; Umaña-Tenorio, Loengrin

2004-01-01

The new corticolous species Arthonia isidiata is described from the Pacific lowlands of Costa Rica. A. isidiata is characterized by minute, cylindrical to coralloid isidia produced on the thallus surface. The species currently is known only from the type locality in Corcovado National Park, where it occurs abundantly in the coastal rainforest around Sirena Biological Station.

Degraded tropical rain forests possess valuable carbon storage opportunities in a complex, forested landscape.

PubMed

Alamgir, Mohammed; Campbell, Mason J; Turton, Stephen M; Pert, Petina L; Edwards, Will; Laurance, William F

2016-07-20

Tropical forests are major contributors to the terrestrial global carbon pool, but this pool is being reduced via deforestation and forest degradation. Relatively few studies have assessed carbon storage in degraded tropical forests. We sampled 37,000 m(2) of intact rainforest, degraded rainforest and sclerophyll forest across the greater Wet Tropics bioregion of northeast Australia. We compared aboveground biomass and carbon storage of the three forest types, and the effects of forest structural attributes and environmental factors that influence carbon storage. Some degraded forests were found to store much less aboveground carbon than intact rainforests, whereas others sites had similar carbon storage to primary forest. Sclerophyll forests had lower carbon storage, comparable to the most heavily degraded rainforests. Our findings indicate that under certain situations, degraded forest may store as much carbon as intact rainforests. Strategic rehabilitation of degraded forests could enhance regional carbon storage and have positive benefits for tropical biodiversity.

Degraded tropical rain forests possess valuable carbon storage opportunities in a complex, forested landscape

PubMed Central

Alamgir, Mohammed; Campbell, Mason J.; Turton, Stephen M.; Pert, Petina L.; Edwards, Will; Laurance, William F.

2016-01-01

Tropical forests are major contributors to the terrestrial global carbon pool, but this pool is being reduced via deforestation and forest degradation. Relatively few studies have assessed carbon storage in degraded tropical forests. We sampled 37,000 m2 of intact rainforest, degraded rainforest and sclerophyll forest across the greater Wet Tropics bioregion of northeast Australia. We compared aboveground biomass and carbon storage of the three forest types, and the effects of forest structural attributes and environmental factors that influence carbon storage. Some degraded forests were found to store much less aboveground carbon than intact rainforests, whereas others sites had similar carbon storage to primary forest. Sclerophyll forests had lower carbon storage, comparable to the most heavily degraded rainforests. Our findings indicate that under certain situations, degraded forest may store as much carbon as intact rainforests. Strategic rehabilitation of degraded forests could enhance regional carbon storage and have positive benefits for tropical biodiversity. PMID:27435389

Degraded tropical rain forests possess valuable carbon storage opportunities in a complex, forested landscape

NASA Astrophysics Data System (ADS)

Alamgir, Mohammed; Campbell, Mason J.; Turton, Stephen M.; Pert, Petina L.; Edwards, Will; Laurance, William F.

2016-07-01

Tropical forests are major contributors to the terrestrial global carbon pool, but this pool is being reduced via deforestation and forest degradation. Relatively few studies have assessed carbon storage in degraded tropical forests. We sampled 37,000 m2 of intact rainforest, degraded rainforest and sclerophyll forest across the greater Wet Tropics bioregion of northeast Australia. We compared aboveground biomass and carbon storage of the three forest types, and the effects of forest structural attributes and environmental factors that influence carbon storage. Some degraded forests were found to store much less aboveground carbon than intact rainforests, whereas others sites had similar carbon storage to primary forest. Sclerophyll forests had lower carbon storage, comparable to the most heavily degraded rainforests. Our findings indicate that under certain situations, degraded forest may store as much carbon as intact rainforests. Strategic rehabilitation of degraded forests could enhance regional carbon storage and have positive benefits for tropical biodiversity.

Yeasts dominate soil fungal communities in three lowland Neotropical rainforests.

PubMed

Dunthorn, Micah; Kauserud, Håvard; Bass, David; Mayor, Jordan; Mahé, Frédéric

2017-10-01

Forest soils typically harbour a vast diversity of fungi, but are usually dominated by filamentous (hyphae-forming) taxa. Compared to temperate and boreal forests, though, we have limited knowledge about the fungal diversity in tropical rainforest soils. Here we show, by environmental metabarcoding of soil samples collected in three Neotropical rainforests, that Yeasts dominate the fungal communities in terms of the number of sequencing reads and OTUs. These unicellular forms are commonly found in aquatic environments, and their hyperdiversity may be the result of frequent inundation combined with numerous aquatic microenvironments in these rainforests. Other fungi that are frequent in aquatic environments, such as the abundant Chytridiomycotina, were also detected. While there was low similarity in OTU composition within and between the three rainforests, the fungal communities in Central America were more similar to each other than the communities in South America, reflecting a general biogeographic pattern also seen in animals, plants and protists. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

Analysis and Evaluation of the Reconfigured Exponential Troposphere Model (ETM)

DTIC Science & Technology

2006-05-10

Southeast Asia, Northeast Asia, Amazon Rainforest , Sahara Desert, and Australia) have been selected for comparison based on their climate extremes, such as...of Appendix B Appendix B presents angle errors for the Middle East, the Amazon Rainforest , Northeast Asia, and Southeast Asia using the ETM Monthly...and calibration should be carefully implemented in this region for RF communication, application, and operation. For the Amazon Rainforest region, data

The epigenomic landscape of African rainforest hunter-gatherers and farmers.

PubMed

Fagny, Maud; Patin, Etienne; MacIsaac, Julia L; Rotival, Maxime; Flutre, Timothée; Jones, Meaghan J; Siddle, Katherine J; Quach, Hélène; Harmant, Christine; McEwen, Lisa M; Froment, Alain; Heyer, Evelyne; Gessain, Antoine; Betsem, Edouard; Mouguiama-Daouda, Patrick; Hombert, Jean-Marie; Perry, George H; Barreiro, Luis B; Kobor, Michael S; Quintana-Murci, Lluis

2015-11-30

The genetic history of African populations is increasingly well documented, yet their patterns of epigenomic variation remain uncharacterized. Moreover, the relative impacts of DNA sequence variation and temporal changes in lifestyle and habitat on the human epigenome remain unknown. Here we generate genome-wide genotype and DNA methylation profiles for 362 rainforest hunter-gatherers and sedentary farmers. We find that the current habitat and historical lifestyle of a population have similarly critical impacts on the methylome, but the biological functions affected strongly differ. Specifically, methylation variation associated with recent changes in habitat mostly concerns immune and cellular functions, whereas that associated with historical lifestyle affects developmental processes. Furthermore, methylation variation--particularly that correlated with historical lifestyle--shows strong associations with nearby genetic variants that, moreover, are enriched in signals of natural selection. Our work provides new insight into the genetic and environmental factors affecting the epigenomic landscape of human populations over time.

Avian persistence in fragmented rainforest.

PubMed

Lens, Luc; Van Dongen, Stefan; Norris, Ken; Githiru, Mwangi; Matthysen, Erik

2002-11-08

What factors determine the persistence of species in fragmented habitats? To address this question, we studied the relative impacts of forest deterioration and fragmentation on bird species in 12 rainforest fragments in Kenya, combining 6 years of individual capture-recapture data with measurements of current captures and museum specimens. Species mobility, as estimated from species-specific dispersal rates, and tolerance to habitat deterioration, as estimated from change in fluctuating asymmetry with increasing habitat disturbance, explained 88% of the variation in patch occupancy among eight forest bird species. Occupancy increased with mobility and with tolerance to deterioration, where both variables contributed equally to this relationship. We conclude that individual-level study, such as of dispersal behavior and phenotypic development, can predict patterns of persistence at the species level. More generally, for conservation tactics to stand a high chance of success, they should include action both within sites, to minimize habitat deterioration, and across landscapes, to maximize dispersal.

Human impacts flatten rainforest-savanna gradient and reduce adaptive diversity in a rainforest bird.

PubMed

Freedman, Adam H; Buermann, Wolfgang; Mitchard, Edward T A; Defries, Ruth S; Smith, Thomas B

2010-09-30

Ecological gradients have long been recognized as important regions for diversification and speciation. However, little attention has been paid to the evolutionary consequences or conservation implications of human activities that fundamentally change the environmental features of such gradients. Here we show that recent deforestation in West Africa has homogenized the rainforest-savanna gradient, causing a loss of adaptive phenotypic diversity in a common rainforest bird, the little greenbul (Andropadus virens). Previously, this species was shown to exhibit morphological and song divergence along this gradient in Central Africa. Using satellite-based estimates of forest cover, recent morphological data, and historical data from museum specimens collected prior to widespread deforestation, we show that the gradient has become shallower in West Africa and that A. virens populations there have lost morphological variation in traits important to fitness. In contrast, we find no loss of morphological variation in Central Africa where there has been less deforestation and gradients have remained more intact. While rainforest deforestation is a leading cause of species extinction, the potential of deforestation to flatten gradients and inhibit rainforest diversification has not been previously recognized. More deforestation will likely lead to further flattening of the gradient and loss of diversity, and may limit the ability of species to persist under future environmental conditions.

Human Impacts Flatten Rainforest-Savanna Gradient and Reduce Adaptive Diversity in a Rainforest Bird

PubMed Central

Freedman, Adam H.; Buermann, Wolfgang; Mitchard, Edward T. A.; DeFries, Ruth S.; Smith, Thomas B.

2010-01-01

Ecological gradients have long been recognized as important regions for diversification and speciation. However, little attention has been paid to the evolutionary consequences or conservation implications of human activities that fundamentally change the environmental features of such gradients. Here we show that recent deforestation in West Africa has homogenized the rainforest-savanna gradient, causing a loss of adaptive phenotypic diversity in a common rainforest bird, the little greenbul (Andropadus virens). Previously, this species was shown to exhibit morphological and song divergence along this gradient in Central Africa. Using satellite-based estimates of forest cover, recent morphological data, and historical data from museum specimens collected prior to widespread deforestation, we show that the gradient has become shallower in West Africa and that A. virens populations there have lost morphological variation in traits important to fitness. In contrast, we find no loss of morphological variation in Central Africa where there has been less deforestation and gradients have remained more intact. While rainforest deforestation is a leading cause of species extinction, the potential of deforestation to flatten gradients and inhibit rainforest diversification has not been previously recognized. More deforestation will likely lead to further flattening of the gradient and loss of diversity, and may limit the ability of species to persist under future environmental conditions. PMID:20941360

Paleo-Antarctic rainforest into the modern Old World tropics: the rich past and threatened future of the "southern wet forest survivors".

PubMed

Kooyman, Robert M; Wilf, Peter; Barreda, Viviana D; Carpenter, Raymond J; Jordan, Gregory J; Sniderman, J M Kale; Allen, Andrew; Brodribb, Timothy J; Crayn, Darren; Feild, Taylor S; Laffan, Shawn W; Lusk, Christopher H; Rossetto, Maurizio; Weston, Peter H

2014-12-01

• Have Gondwanan rainforest floral associations survived? Where do they occur today? Have they survived continuously in particular locations? How significant is their living floristic signal? We revisit these classic questions in light of significant recent increases in relevant paleobotanical data.• We traced the extinction and persistence of lineages and associations through the past across four now separated regions-Australia, New Zealand, Patagonia, and Antarctica-using fossil occurrence data from 63 well-dated Gondwanan rainforest sites and 396 constituent taxa. Fossil sites were allocated to four age groups: Cretaceous, Paleocene-Eocene, Neogene plus Oligocene, and Pleistocene. We compared the modern and ancient distributions of lineages represented in the fossil record to see if dissimilarity increased with time. We quantified similarity-dissimilarity of composition and taxonomic structure among fossil assemblages, and between fossil and modern assemblages.• Strong similarities between ancient Patagonia and Australia confirmed shared Gondwanan rainforest history, but more of the lineages persisted in Australia. Samples of ancient Australia grouped with the extant floras of Australia, New Guinea, New Caledonia, Fiji, and Mt. Kinabalu. Decreasing similarity through time among the regional floras of Antarctica, Patagonia, New Zealand, and southern Australia reflects multiple extinction events.• Gondwanan rainforest lineages contribute significantly to modern rainforest community assembly and often co-occur in widely separated assemblages far from their early fossil records. Understanding how and where lineages from ancient Gondwanan assemblages co-occur today has implications for the conservation of global rainforest vegetation, including in the Old World tropics. © 2014 Botanical Society of America, Inc.

Comparative evaluation of Amblyomma ovale ticks infected and noninfected by Rickettsia sp. strain Atlantic rainforest, the agent of an emerging rickettsiosis in Brazil.

PubMed

Krawczak, Felipe S; Agostinho, Washington C; Polo, Gina; Moraes-Filho, Jonas; Labruna, Marcelo B

2016-04-01

In 2010, a novel spotted fever group rickettsiosis was reported in the Atlantic rainforest coast of Brazil. The etiological agent was identified as Rickettsia sp. strain Atlantic rainforest, and the tick Amblyomma ovale was incriminated as the presumed vector. The present study evaluated under laboratory conditions four colonies of A. ovale: two started from engorged females that were naturally infected by Rickettsia sp. strain Atlantic rainforest (designated as infected groups); the two others started from noninfected females (designated as control groups). All colonies were reared in parallel from F0 engorged female to F2 unfed nymphs. Tick-naïve vesper mice (Calomys callosus) or domestic rabbits were used for feeding of each tick stage. Rickettsia sp. strain Atlantic rainforest was preserved by transstadial maintenance and transovarial transmission in A. ovale ticks for at least 2 generations (from F0 females to F2 nymphs), because nearly 100% of the tested larvae, nymphs, and adults from the infected groups were shown by PCR to contain rickettsial DNA. All vesper mice and rabbits infested by larvae and nymphs, and 50% of the rabbits infested by adults from the infected groups seroconverted, indicating that these tick stages were vector competent for Rickettsia sp. strain Atlantic rainforest. Expressive differences in mortality rates and reproductive performance were observed between engorged females from the infected and control groups, as indicated by 75.0% and 97.1% oviposition success, respectively, and significantly lower egg mass weight, conversion efficiency index, and percentage of egg hatching for the infected groups. Our results indicate that A. ovale can act as a natural reservoir for Rickettsia sp. strain Atlantic rainforest. However, due to deleterious effect caused by this rickettsial agent on engorged females, amplifier vertebrate hosts might be necessary for persistent perpetuation of Rickettsia sp. strain Atlantic rainforest in A. ovale under natural conditions. Copyright © 2016 Elsevier GmbH. All rights reserved.

Impact of Lowland Rainforest Transformation on Diversity and Composition of Soil Prokaryotic Communities in Sumatra (Indonesia)

PubMed Central

Schneider, Dominik; Engelhaupt, Martin; Allen, Kara; Kurniawan, Syahrul; Krashevska, Valentyna; Heinemann, Melanie; Nacke, Heiko; Wijayanti, Marini; Meryandini, Anja; Corre, Marife D.; Scheu, Stefan; Daniel, Rolf

2015-01-01

Prokaryotes are the most abundant and diverse group of microorganisms in soil and mediate virtually all biogeochemical cycles in terrestrial ecosystems. Thereby, they influence aboveground plant productivity and diversity. In this study, the impact of rainforest transformation to intensively managed cash crop systems on soil prokaryotic communities was investigated. The studied managed land use systems comprised rubber agroforests (jungle rubber), rubber plantations and oil palm plantations within two Indonesian landscapes Bukit Duabelas and Harapan. Soil prokaryotic community composition and diversity were assessed by pyrotag sequencing of bacterial and archaeal 16S rRNA genes. The curated dataset contained 16,413 bacterial and 1679 archaeal operational taxonomic units at species level (97% genetic identity). Analysis revealed changes in indigenous taxon-specific patterns of soil prokaryotic communities accompanying lowland rainforest transformation to jungle rubber, and intensively managed rubber and oil palm plantations. Distinct clustering of the rainforest soil communities indicated that these are different from the communities in the studied managed land use systems. The predominant bacterial taxa in all investigated soils were Acidobacteria, Actinobacteria, Alphaproteobacteria, Betaproteobacteria, and Gammaproteobacteria. Overall, the bacterial community shifted from proteobacterial groups in rainforest soils to Acidobacteria in managed soils. The archaeal soil communities were mainly represented by Thaumarchaeota and Euryarchaeota. Members of the Terrestrial Group and South African Gold Mine Group 1 (Thaumarchaeota) dominated in the rainforest and members of Thermoplasmata in the managed land use systems. The alpha and beta diversity of the soil prokaryotic communities was higher in managed land use systems than in rainforest. In the case of bacteria, this was related to soil characteristics such as pH value, exchangeable Ca and Fe content, C to N ratio, and extractable P content. Archaeal community composition and diversity were correlated to pH value, exchangeable Fe content, water content, and total N. The distribution of bacterial and archaeal taxa involved in biological N cycle indicated functional shifts of the cycle during conversion of rainforest to plantations. PMID:26696965

Strengthening the Scientific Capacity Available to Serve the Nation

DTIC Science & Technology

2009-03-01

motivating and engaging ways. In 2005, the JASON Project traveled to the Panamanian rainforest and Mr. Phillips introduced his class to the project by reading...The Great Kapok Tree.22 Mr. Phillips had his students compare the rainforest in Panama with their local forest in Plymouth and discussions and debate...filled cover about the project.25 Mr. Phillips’ students then constructed a web page and populated it with rainforest and Plymouth vernal pool

Airborne observations of IEPOX-derived isoprene SOA in the Amazon during SAMBBA

NASA Astrophysics Data System (ADS)

Allan, J. D.; Morgan, W. T.; Darbyshire, E.; Flynn, M. J.; Williams, P. I.; Oram, D. E.; Artaxo, P.; Brito, J.; Lee, J. D.; Coe, H.

2014-10-01

Isoprene is a potentially highly significant but currently poorly quantified source of secondary organic aerosols (SOA). This is especially important in the tropics, where large rainforests act as significant sources of isoprene. Methylfuran, produced through thermal decomposition during analysis, has recently been suggested as a marker for isoprene SOA formation through the isoprene epoxydiol (IEPOX) route, which mostly occurs under low NOx conditions. This is manifested as a peak at m/z=82 in Aerodyne Aerosol Mass Spectrometer (AMS) data. Here we present a study of this marker measured during five flights over the Amazon rainforest on board the UK Facility for Airborne Atmospheric Measurement (FAAM) BAe-146 research aircraft during the South American Biomass Burning Analysis (SAMBBA) campaign. Cases where this marker is and is not present are contrasted and linked to the presence of acidic seed particles, lower NOx concentrations and higher humidities. There are also data to suggest a role of organic nitrogen in the particulate composition. Furthermore, an inspection of the vertical trends of the marker indicates that concentrations are highest at the top of the boundary layer (possibly due to semivolatile repartitioning) and that upwards through the free troposphere, the mass spectral profile evolves towards that of low volatility oxygenated aerosol. These observations offer insights into the behaviour of IEPOX-derived SOA formation above the Amazon rainforest and the suitability of methylfuran as a marker for this process.

An Ancient Divide in a Contiguous Rainforest: Endemic Earthworms in the Australian Wet Tropics

PubMed Central

Moreau, Corrie S.; Hugall, Andrew F.; McDonald, Keith R.; Jamieson, Barrie G. M.; Moritz, Craig

2015-01-01

Understanding the factors that shape current species diversity is a fundamental aim of ecology and evolutionary biology. The Australian Wet Tropics (AWT) are a system in which much is known about how the rainforests and the rainforest-dependent organisms reacted to late Pleistocene climate changes, but less is known about how events deeper in time shaped speciation and extinction in this highly endemic biota. We estimate the phylogeny of a species-rich endemic genus of earthworms (Terrisswalkerius) from the region. Using DEC and DIVA historical biogeography methods we find a strong signal of vicariance among known biogeographical sub-regions across the whole phylogeny, congruent with the phylogeography of less diverse vertebrate groups. Absolute dating estimates, in conjunction with relative ages of major biogeographic disjunctions across Australia, indicate that diversification in Terrisswalkerius dates back before the mid-Miocene shift towards aridification, into the Paleogene era of isolation of mesothermal Gondwanan Australia. For the Queensland endemic Terrisswalkerius earthworms, the AWT have acted as both a museum of biological diversity and as the setting for continuing geographically structured diversification. These results suggest that past events affecting organismal diversification can be concordant across phylogeographic to phylogenetic levels and emphasize the value of multi-scale analysis, from intra- to interspecies, for understanding the broad-scale processes that have shaped geographic diversity. PMID:26366862

Asynchronous response of tropical forest leaf phenology to seasonal and el Niño-driven drought.

PubMed

Pau, Stephanie; Okin, Gregory S; Gillespie, Thomas W

2010-06-25

The Hawaiian Islands are an ideal location to study the response of tropical forests to climate variability because of their extreme isolation in the middle of the Pacific, which makes them especially sensitive to El Niño-Southern Oscillation (ENSO). Most research examining the response of tropical forests to drought or El Niño have focused on rainforests, however, tropical dry forests cover a large area of the tropics and may respond very differently than rainforests. We use satellite-derived Normalized Difference Vegetation Index (NDVI) from February 2000-February 2009 to show that rainforests and dry forests in the Hawaiian Islands exhibit asynchronous responses in leaf phenology to seasonal and El Niño-driven drought. Dry forest NDVI was more tightly coupled with precipitation compared to rainforest NDVI. Rainforest cloud frequency was negatively correlated with the degree of asynchronicity (Delta(NDVI)) between forest types, most strongly at a 1-month lag. Rainforest green-up and dry forest brown-down was particularly apparent during the 2002-003 El Niño. The spatial pattern of NDVI response to the NINO 3.4 Sea Surface Temperature (SST) index during 2002-2003 showed that the leeward side exhibited significant negative correlations to increased SSTs, whereas the windward side exhibited significant positive correlations to increased SSTs, most evident at an 8 to 9-month lag. This study demonstrates that different tropical forest types exhibit asynchronous responses to seasonal and El Niño-driven drought, and suggests that mechanisms controlling dry forest leaf phenology are related to water-limitation, whereas rainforests are more light-limited.

Asynchronous Response of Tropical Forest Leaf Phenology to Seasonal and El Niño-Driven Drought

PubMed Central

Pau, Stephanie; Okin, Gregory S.; Gillespie, Thomas W.

2010-01-01

The Hawaiian Islands are an ideal location to study the response of tropical forests to climate variability because of their extreme isolation in the middle of the Pacific, which makes them especially sensitive to El Niño-Southern Oscillation (ENSO). Most research examining the response of tropical forests to drought or El Niño have focused on rainforests, however, tropical dry forests cover a large area of the tropics and may respond very differently than rainforests. We use satellite-derived Normalized Difference Vegetation Index (NDVI) from February 2000-February 2009 to show that rainforests and dry forests in the Hawaiian Islands exhibit asynchronous responses in leaf phenology to seasonal and El Niño-driven drought. Dry forest NDVI was more tightly coupled with precipitation compared to rainforest NDVI. Rainforest cloud frequency was negatively correlated with the degree of asynchronicity (ΔNDVI) between forest types, most strongly at a 1-month lag. Rainforest green-up and dry forest brown-down was particularly apparent during the 2002–003 El Niño. The spatial pattern of NDVI response to the NINO 3.4 Sea Surface Temperature (SST) index during 2002–2003 showed that the leeward side exhibited significant negative correlations to increased SSTs, whereas the windward side exhibited significant positive correlations to increased SSTs, most evident at an 8 to 9-month lag. This study demonstrates that different tropical forest types exhibit asynchronous responses to seasonal and El Niño-driven drought, and suggests that mechanisms controlling dry forest leaf phenology are related to water-limitation, whereas rainforests are more light-limited. PMID:20593034

Late Paleocene fossils from the Cerrejón Formation, Colombia, are the earliest record of Neotropical rainforest

PubMed Central

Wing, Scott L.; Herrera, Fabiany; Jaramillo, Carlos A.; Gómez-Navarro, Carolina; Wilf, Peter; Labandeira, Conrad C.

2009-01-01

Neotropical rainforests have a very poor fossil record, making hypotheses concerning their origins difficult to evaluate. Nevertheless, some of their most important characteristics can be preserved in the fossil record: high plant diversity, dominance by a distinctive combination of angiosperm families, a preponderance of plant species with large, smooth-margined leaves, and evidence for a high diversity of herbivorous insects. Here, we report on an ≈58-my-old flora from the Cerrejón Formation of Colombia (paleolatitude ≈5 °N) that is the earliest megafossil record of Neotropical rainforest. The flora has abundant, diverse palms and legumes and similar family composition to extant Neotropical rainforest. Three-quarters of the leaf types are large and entire-margined, indicating rainfall >2,500 mm/year and mean annual temperature >25 °C. Despite modern family composition and tropical paleoclimate, the diversity of fossil pollen and leaf samples is 60–80% that of comparable samples from extant and Quaternary Neotropical rainforest from similar climates. Insect feeding damage on Cerrejón fossil leaves, representing primary consumers, is abundant, but also of low diversity, and overwhelmingly made by generalist feeders rather than specialized herbivores. Cerrejón megafossils provide strong evidence that the same Neotropical rainforest families have characterized the biome since the Paleocene, maintaining their importance through climatic phases warmer and cooler than present. The low diversity of both plants and herbivorous insects in this Paleocene Neotropical rainforest may reflect an early stage in the diversification of the lineages that inhabit this biome, and/or a long recovery period from the terminal Cretaceous extinction. PMID:19833876

Geophysical and botanical monitoring of simulated graves in a tropical rainforest, Colombia, South America

NASA Astrophysics Data System (ADS)

Molina, Carlos Martin; Pringle, Jamie K.; Saumett, Miguel; Evans, Gethin T.

2016-12-01

In most Latin American countries there are significant numbers of missing people and forced disappearances, currently 80,000 only in Colombia. Successful detection of shallow buried human remains by forensic search teams is currently difficult in varying terrain and climates. Within this research we built four simulated clandestine burial styles in tropical rainforests, as this is a common scenario and depositional environment encountered in Latin America, to gain knowledge of optimum forensic geophysics detection techniques. The results of geophysically monitoring these burials using ground penetrating radar, magnetic susceptibility, bulk ground conductivity and electrical resistivity are presented from one to forty three weeks post-burial. Radar survey results with both the 250 MHz and 500 MHz frequency antennae showed good detection of modern simulated burials on 2D profiles and horizontal time slices but poor detection on the other simulated graves. Magnetic susceptibility, bulk ground conductivity and electrical resistivity results were generally poor at detecting the simulated targets. Observations of botanical variations on the test site show rapid regrowth of Malvaceae and Petiveria alliacea vegetation over all burials that are common in these forests, which can make detection more difficult.

Sources or sinks? The responses of tropical forests to current and future climate and atmospheric composition.

PubMed

Clark, Deborah A

2004-03-29

How tropical rainforests are responding to the ongoing global changes in atmospheric composition and climate is little studied and poorly understood. Although rising atmospheric carbon dioxide (CO2) could enhance forest productivity, increased temperatures and drought are likely to diminish it. The limited field data have produced conflicting views of the net impacts of these changes so far. One set of studies has seemed to point to enhanced carbon uptake; however, questions have arisen about these findings, and recent experiments with tropical forest trees indicate carbon saturation of canopy leaves and no biomass increase under enhanced CO2. Other field observations indicate decreased forest productivity and increased tree mortality in recent years of peak temperatures and drought (strong El Niño episodes). To determine current climatic responses of forests around the world tropics will require careful annual monitoring of ecosystem performance in representative forests. To develop the necessary process-level understanding of these responses will require intensified experimentation at the whole-tree and stand levels. Finally, a more complete understanding of tropical rainforest carbon cycling is needed for determining whether these ecosystems are carbon sinks or sources now, and how this status might change during the next century.

Hurricanes, coral reefs and rainforests: resistance, ruin and recovery in the Caribbean

USGS Publications Warehouse

Lugo, Ariel E.; Rogers, Caroline S.; Nixon, Scott W.

2000-01-01

The coexistence of hurricanes, coral reefs, and rainforests in the Caribbean demonstrates that highly structured ecosystems with great diversity can flourish in spite of recurring exposure to intense destructive energy. Coral reefs develop in response to wave energy and resist hurricanes largely by virtue of their structural strength. Limited fetch also protects some reefs from fully developed hurricane waves. While storms may produce dramatic local reef damage, they appear to have little impact on the ability of coral reefs to provide food or habitat for fish and other animals. Rainforests experience an enormous increase in wind energy during hurricanes with dramatic structural changes in the vegetation. The resulting changes in forest microclimate are larger than those on reefs and the loss of fruit, leaves, cover, and microclimate has a great impact on animal populations. Recovery of many aspects of rainforest structure and function is rapid, though there may be long-term changes in species composition. While resistance and repair have maintained reefs and rainforests in the past, human impacts may threaten their ability to survive.

Alkaloid diversity in the leaves of Australian Flindersia (Rutaceae) species driven by adaptation to aridity.

PubMed

Robertson, Luke P; Hall, Casey R; Forster, Paul I; Carroll, Anthony R

2018-05-04

The genus Flindersia (Rutaceae) comprises 17 species of mostly Australian endemic trees. Although most species are restricted to rainforests, four have evolved to grow in semi-arid and arid environments. In this study, the leaf alkaloid diversity of rainforest and semi-arid/arid zone adapted Australian Flindersia were compared by LC/MS-MS and NMR spectroscopy. Contrary to expectations, Flindersia alkaloid diversity was strongly correlated with environmental aridity, where species predominating in drier regions produced more alkaloids than their wet rainforest congenerics. Rainforest species were also more chemically similar to each other than were the four semi-arid/arid zone species. There was a significant relationship between the presence of alkaloid structural classes and phylogenetic distance, suggesting that alkaloid profiles are influenced by both genetic and environmental factors. The results suggest that the radiation of Flindersia species out of the rainforest and into drier environments has promoted the evolution of unique alkaloid diversity. Plants growing in arid and semi-arid regions of Australia may represent an untapped source of undescribed specialised metabolites. Copyright © 2018 Elsevier Ltd. All rights reserved.

Carbon and Nitrogen Metabolism in Mycorrhizal Networks and Mycoheterotrophic Plants of Tropical Forests: A Stable Isotope Analysis1[W

PubMed Central

Courty, Pierre-Emmanuel; Walder, Florian; Boller, Thomas; Ineichen, Kurt; Wiemken, Andres; Rousteau, Alain; Selosse, Marc-André

2011-01-01

Most achlorophyllous mycoheterotrophic (MH) plants obtain carbon (C) from mycorrhizal networks and indirectly exploit nearby autotrophic plants. We compared overlooked tropical rainforest MH plants associating with arbuscular mycorrhizal fungi (AMF) to well-reported temperate MH plants associating with ectomycorrhizal basidiomycetes. We investigated 13C and 15N abundances of MH plants, green plants, and AMF spores in Caribbean rainforests. Whereas temperate MH plants and fungi have higher δ13C than canopy trees, these organisms displayed similar δ13C values in rainforests, suggesting differences in C exchanges. Although temperate green and MH plants differ in δ15N, they display similar 15N abundances, and likely nitrogen (N) sources, in rainforests. Contrasting with the high N concentrations shared by temperate MH plants and their fungi, rainforest MH plants had lower N concentrations than AMF, suggesting differences in C/N of exchanged nutrients. We provide a framework for isotopic studies on AMF networks and suggest that MH plants in tropical and temperate regions evolved different physiologies to adapt in diverging environments. PMID:21527422

Two common species dominate the species-rich Euglossine bee fauna of an Atlantic Rainforest remnant in Pernambuco, Brazil.

PubMed

Oliveira, R; Pinto, C E; Schlindwein, C

2015-11-01

Nowadays, the northern part of the Atlantic Rainforest of Brazil is largely destroyed and forest remnants rarely exceed 100 ha. In a 118 ha forest fragment within a state nature reserve of Pernambuco (Reserva Ecológica Gurjaú), we surveyed the orchid bee fauna (Apidae, Euglossini) using eight different scent baits to attract males. Once a month during one year, the bees were actively collected with entomological nets, from November 2002 to October 2003 by two collectors. We collected 2,908 orchid bee males belonging to 23 species, one of the highest richness values of the Northern Atlantic Rainforest. Bees of only two species, Euglossa carolina (50%) and Eulaema nigrita (25%), which occurred throughout the year, accounted for three quarter of the collected individuals. Both species are typical for open or disturbed areas. Rainforest remnants like those of Gurjaú within the predominant sugar cane monocultures in the coastal plains of the northern Atlantic Rainforest play an important role in orchid bee conservation and maintenance of biodiversity.

Mechanisms for retention of bioavailable nitrogen in volcanic rainforest soils

NASA Astrophysics Data System (ADS)

Huygens, Dries; Boeckx, Pascal; Templer, Pamela; Paulino, Leandro; van Cleemput, Oswald; Oyarzún, Carlos; Müller, Christoph; Godoy, Roberto

2008-08-01

Nitrogen cycling is an important aspect of forest ecosystem functioning. Pristine temperate rainforests have been shown to produce large amounts of bioavailable nitrogen, but despite high nitrogen turnover rates, loss of bioavailable nitrogen is minimal in these ecosystems. This tight nitrogen coupling is achieved through fierce competition for bioavailable nitrogen by abiotic processes, soil microbes and plant roots, all of which transfer bioavailable nitrogen to stable nitrogen sinks, such as soil organic matter and above-ground forest vegetation. Here, we use a combination of in situ 15N isotope dilution and 15N tracer techniques in volcanic soils of a temperate evergreen rainforest in southern Chile to further unravel retention mechanisms for bioavailable nitrogen. We find three processes that contribute significantly to nitrogen bioavailability in rainforest soils: heterotrophic nitrate production, nitrate turnover into ammonium and into a pool of dissolved organic nitrogen that is not prone to leaching loss, and finally, the decoupling of dissolved inorganic nitrogen turnover and leaching losses of dissolved organic nitrogen. Identification of these biogeochemical processes helps explain the retention of bioavailable nitrogen in pristine temperate rainforests.

Insects on flowers

PubMed Central

Wardhaugh, Carl W.; Stork, Nigel E.; Edwards, Will; Grimbacher, Peter S.

2013-01-01

Insect biodiversity peaks in tropical rainforest environments where a large but as yet unknown proportion of species are found in the canopy. While there has been a proliferation of insect biodiversity research undertaken in the rainforest canopy, most studies focus solely on insects that inhabit the foliage. In a recent paper, we examined the distribution of canopy insects across five microhabitats (mature leaves, new leaves, flowers, fruit and suspended dead wood) in an Australian tropical rainforest, showing that the density (per dry weight gram of microhabitat) of insects on flowers were ten to ten thousand times higher than on the leaves. Flowers also supported a much higher number of species than expected based on their contribution to total forest biomass. Elsewhere we show that most of these beetle species were specialized to flowers with little overlap in species composition between different canopy microhabitats. Here we expand our discussion of the implications of our results with respect to specialization and the generation of insect biodiversity in the rainforest canopy. Lastly, we identify future directions for research into the biodiversity and specialization of flower-visitors in complex tropical rainforests. PMID:23802039

Hysteresis in the Central African Rainforest

NASA Astrophysics Data System (ADS)

Pietsch, Stephan Alexander; Elias Bednar, Johannes; Gautam, Sishir; Petritsch, Richard; Schier, Franziska; Stanzl, Patrick

2014-05-01

Past climate change caused severe disturbances of the Central African rainforest belt, with forest fragmentation and re-expansion due to drier and wetter climate conditions. Besides climate, human induced forest degradation affected biodiversity, structure and carbon storage of Congo basin rainforests. Information on climatically stable, mature rainforest, unaffected by human induced disturbances, provides means of assessing the impact of forest degradation and may serve as benchmarks of carbon carrying capacity over regions with similar site and climate conditions. BioGeoChemical (BGC) ecosystem models explicitly consider the impacts of site and climate conditions and may assess benchmark levels over regions devoid of undisturbed conditions. We will present a BGC-model validation for the Western Congolian Lowland Rainforest (WCLRF) using field data from a recently confirmed forest refuge, show model - data comparisons for disturbed und undisturbed forests under different site and climate conditions as well as for sites with repeated assessment of biodiversity and standing biomass during recovery from intensive exploitation. We will present climatic thresholds for WCLRF stability, analyse the relationship between resilience, standing C-stocks and change in climate and finally provide evidence of hysteresis.

Aboveground vs. Belowground Carbon Stocks in African Tropical Lowland Rainforest: Drivers and Implications.

PubMed

Doetterl, Sebastian; Kearsley, Elizabeth; Bauters, Marijn; Hufkens, Koen; Lisingo, Janvier; Baert, Geert; Verbeeck, Hans; Boeckx, Pascal

2015-01-01

African tropical rainforests are one of the most important hotspots to look for changes in the upcoming decades when it comes to C storage and release. The focus of studying C dynamics in these systems lies traditionally on living aboveground biomass. Belowground soil organic carbon stocks have received little attention and estimates of the size, controls and distribution of soil organic carbon stocks are highly uncertain. In our study on lowland rainforest in the central Congo basin, we combine both an assessment of the aboveground C stock with an assessment of the belowground C stock and analyze the latter in terms of functional pools and controlling factors. Our study shows that despite similar vegetation, soil and climatic conditions, soil organic carbon stocks in an area with greater tree height (= larger aboveground carbon stock) were only half compared to an area with lower tree height (= smaller aboveground carbon stock). This suggests that substantial variability in the aboveground vs. belowground C allocation strategy and/or C turnover in two similar tropical forest systems can lead to significant differences in total soil organic C content and C fractions with important consequences for the assessment of the total C stock of the system. We suggest nutrient limitation, especially potassium, as the driver for aboveground versus belowground C allocation. However, other drivers such as C turnover, tree functional traits or demographic considerations cannot be excluded. We argue that large and unaccounted variability in C stocks is to be expected in African tropical rain-forests. Currently, these differences in aboveground and belowground C stocks are not adequately verified and implemented mechanistically into Earth System Models. This will, hence, introduce additional uncertainty to models and predictions of the response of C storage of the Congo basin forest to climate change and its contribution to the terrestrial C budget.

Aboveground vs. Belowground Carbon Stocks in African Tropical Lowland Rainforest: Drivers and Implications

PubMed Central

Bauters, Marijn; Hufkens, Koen; Lisingo, Janvier; Baert, Geert; Verbeeck, Hans; Boeckx, Pascal

2015-01-01

Background African tropical rainforests are one of the most important hotspots to look for changes in the upcoming decades when it comes to C storage and release. The focus of studying C dynamics in these systems lies traditionally on living aboveground biomass. Belowground soil organic carbon stocks have received little attention and estimates of the size, controls and distribution of soil organic carbon stocks are highly uncertain. In our study on lowland rainforest in the central Congo basin, we combine both an assessment of the aboveground C stock with an assessment of the belowground C stock and analyze the latter in terms of functional pools and controlling factors. Principal Findings Our study shows that despite similar vegetation, soil and climatic conditions, soil organic carbon stocks in an area with greater tree height (= larger aboveground carbon stock) were only half compared to an area with lower tree height (= smaller aboveground carbon stock). This suggests that substantial variability in the aboveground vs. belowground C allocation strategy and/or C turnover in two similar tropical forest systems can lead to significant differences in total soil organic C content and C fractions with important consequences for the assessment of the total C stock of the system. Conclusions/Significance We suggest nutrient limitation, especially potassium, as the driver for aboveground versus belowground C allocation. However, other drivers such as C turnover, tree functional traits or demographic considerations cannot be excluded. We argue that large and unaccounted variability in C stocks is to be expected in African tropical rain-forests. Currently, these differences in aboveground and belowground C stocks are not adequately verified and implemented mechanistically into Earth System Models. This will, hence, introduce additional uncertainty to models and predictions of the response of C storage of the Congo basin forest to climate change and its contribution to the terrestrial C budget. PMID:26599231

East African Cenozoic vegetation history.

PubMed

Linder, Hans Peter

2017-11-01

The modern vegetation of East Africa is a complex mosaic of rainforest patches; small islands of tropic-alpine vegetation; extensive savannas, ranging from almost pure grassland to wooded savannas; thickets; and montane grassland and forest. Here I trace the evolution of these vegetation types through the Cenozoic. Paleogene East Africa was most likely geomorphologically subdued and, as the few Eocene fossil sites suggest, a woodland in a seasonal climate. Woodland rather than rainforest may well have been the regional vegetation. Mountain building started with the Oligocene trap lava flows in Ethiopia, on which rainforest developed, with little evidence of grass and none of montane forests. The uplift of the East African Plateau took place during the middle Miocene. Fossil sites indicate the presence of rainforest, montane forest and thicket, and wooded grassland, often in close juxtaposition, from 17 to 10 Ma. By 10 Ma, marine deposits indicate extensive grassland in the region and isotope analysis indicates that this was a C 3 grassland. In the later Miocene rifting, first of the western Albertine Rift and then of the eastern Gregory Rift, added to the complexity of the environment. The building of the high strato-volcanos during the later Mio-Pliocene added environments suitable for tropic-alpine vegetation. During this time, the C 3 grassland was replaced by C 4 savannas, although overall the extent of grassland was reduced from the mid-Miocene high to the current low level. Lake-level fluctuations during the Quaternary indicate substantial variation in rainfall, presumably as a result of movements in the intertropical convergence zone and the Congo air boundary, but the impact of these fluctuations on the vegetation is still speculative. I argue that, overall, there was an increase in the complexity of East African vegetation complexity during the Neogene, largely as a result of orogeny. The impact of Quaternary climatic fluctuation is still poorly understood. © 2017 Wiley Periodicals, Inc.

Update on the distribution of Mansonella perstans in the southern part of Cameroon: influence of ecological factors and mass drug administration with ivermectin.

PubMed

Wanji, Samuel; Tayong, Dizzle Bita; Layland, Laura E; Datchoua Poutcheu, Fabrice R; Ndongmo, Winston Patrick Chounna; Kengne-Ouafo, Jonas Arnaud; Ritter, Manuel; Amvongo-Adjia, Nathalie; Fombad, Fanny Fri; Njeshi, Charity Nya; Nkwescheu, Armand Seraphin; Enyong, Peter A; Hoerauf, Achim

2016-05-31

Mansonellosis remains one of the most neglected of tropical diseases and its current distribution in the entire forest block of southern Cameroon is unknown. In order to address this issue, we have surveyed the distribution of Mansonella perstans in different bioecological zones and in addition, elucidated the influence of multiple rounds of ivermectin (IVM) based mass drug administration (MDA). A mixed design was used. Between 2000 and 2014, both cross-sectional and longitudinal surveys were carried out in 137 communities selected from 12 health districts belonging to five main bioecological zones of the southern part of Cameroon. The zones comprised of grassland savanna (GS), mosaic forest savanna (MFS), forested savanna (FS), deciduous equatorial rainforest (DERF) and the dense humid equatorial rainforest (DHERF). The survey was carried out in some areas with no treatment history as well as those currently under IVM MDA. Individuals within the participatory communities were screened for the presence of M. perstans microfilariae (mf) in peripheral blood by the calibrated thick film method to determine both prevalence and geometric mean intensities at the community level. Apart from sporadic cases in savanna areas, distribution of M. perstans was strongly linked to the equatorial rainforest zones. Before CDTI, the highest mean prevalence (70.0 %) and intensity (17,382.2 mf/ml) were obtained in communities in Mamfes' DHERF areas followed by communities in the DHERF zone of Lolodorf (53.8 % and 7,814.8 mf/ml, respectively). A longitudinal survey in Mamfe further showed that M. perstans infections had reduced by 34.5 % in DERF (P < 0.001) but not DHERF zones after ten years of IVM MDA. Further data from the cross-sectional study revealed that there was a decrease in prevalence in DHERF zones only after ten years of MDA. In DERF zones however, the infection was relatively lower after four years of MDA. The distribution of M. perstans in the southern part of Cameroon varies with bioecological zones and IVM MDA history. The zones with high prevalence and intensities lie in forested areas while those with low endemicity are in the savanna areas. MDA with ivermectin induced significant reduction in the endemicity of mansonellosis in the decidious equatorial rainforest. In contrast, the prevalence and intensity remained relatively high and stable in the dense humid equatorial rainforest zones even after a decade of mass drug administration with ivermectin. Since it is known that M. perstans down-regulates host's immune system, the findings from this work would be useful in designing studies to understand the impact of M. perstans on host immune response to vaccination and co-infection with other pathogens such as Mycobacterium spp. and Plasmodium spp. in areas of contrasting endemicities.

The shrinking rainforest, and the need for accurate data a satellite radar approach to quantifying Indonesia's palm oil obsession

NASA Astrophysics Data System (ADS)

Trischan, John

Rapid deforestation has been occurring in Southeast Asia for majority of the last quarter century. This is due in large by the expansion of oil palm plantations. These plantations fill the need globally for the palm oil they provide. On the other hand, they are removing some of the last remaining primary rainforests on the planet. The issue concerning the ongoing demise of rainforests in the region involves the availability of data in order to monitor the expansion of palm, at the cost of rainforest. Providing a simplified approach to mapping oil palm plantations in hopes of spreading palm analysis regionally in an effort to obtain a better grasp on the land use dynamics. Using spatial filtering techniques, the complexity of radar data are simplified in order to use for palm detection.

Droughts threaten Bornean rainforests

NASA Astrophysics Data System (ADS)

Bhattacharya, Atreyee

2012-08-01

At 130 million years old, the rainforests of Southeast Asia are the oldest in the world and home to thousands of species of plants and animals, some endemic to these forests. The rainforests also play important roles in modulating regional rainfall and in the global carbon cycle. However, since the 1960s, increased warming in the Indian Ocean and frequent El Niño events have reduced rainfall in the region by approximately 1.0% per decade. Furthermore, the Intergovernmental Panel for Climate Change predicts that over the 21st century, Southeast Asia will experience higher land temperatures, more droughts, and increased seasonality; that is, wet seasons during the fall will get wetter, and dry seasons during the spring will get drier. However, few studies in the past have investigated how trees in the southeastern Asian rainforests respond to droughts and climate change.

Hunting in the Rainforest and Mayaro Virus Infection: An emerging Alphavirus in Ecuador.

PubMed

Izurieta, Ricardo O; Macaluso, Maurizio; Watts, Douglas M; Tesh, Robert B; Guerra, Bolivar; Cruz, Ligia M; Galwankar, Sagar; Vermund, Sten H

2011-10-01

The objectives of this report were to document the potential presence of Mayaro virus infection in Ecuador and to examine potential risk factors for Mayaro virus infection among the personnel of a military garrison in the Amazonian rainforest. The study population consisted of the personnel of a garrison located in the Ecuadorian Amazonian rainforest. The cross-sectional study employed interviews and seroepidemiological methods. Humoral immune response to Mayaro virus infection was assessed by evaluating IgM- and IgG-specific antibodies using ELISA. Of 338 subjects studied, 174 were from the Coastal zone of Ecuador, 73 from Andean zone, and 91 were native to the Amazonian rainforest. Seroprevalence of Mayaro virus infection was more than 20 times higher among Amazonian natives (46%) than among subjects born in other areas (2%). Age and hunting in the rainforest were significant predictors of Mayaro virus infection overall and among Amazonian natives. The results provide the first demonstration of the potential presence of Mayaro virus infection in Ecuador and a systematic evaluation of risk factors for the transmission of this alphavirus. The large difference in prevalence rates between Amazonian natives and other groups and between older and younger natives suggest that Mayaro virus is endemic and enzootic in the rainforest, with sporadic outbreaks that determine differences in risk between birth cohorts of natives. Deep forest hunting may selectively expose native men, descendants of the Shuar and Huaronai ethnic groups, to the arthropod vectors of Mayaro virus in areas close to primate reservoirs.

Phylogeographic Patterns in Africa and High Resolution Delineation of Genetic Clades in the Lion (Panthera leo)

NASA Astrophysics Data System (ADS)

Bertola, L. D.; Jongbloed, H.; van der Gaag, K. J.; de Knijff, P.; Yamaguchi, N.; Hooghiemstra, H.; Bauer, H.; Henschel, P.; White, P. A.; Driscoll, C. A.; Tende, T.; Ottosson, U.; Saidu, Y.; Vrieling, K.; de Iongh, H. H.

2016-08-01

Comparative phylogeography of African savannah mammals shows a congruent pattern in which populations in West/Central Africa are distinct from populations in East/Southern Africa. However, for the lion, all African populations are currently classified as a single subspecies (Panthera leo leo), while the only remaining population in Asia is considered to be distinct (Panthera leo persica). This distinction is disputed both by morphological and genetic data. In this study we introduce the lion as a model for African phylogeography. Analyses of mtDNA sequences reveal six supported clades and a strongly supported ancestral dichotomy with northern populations (West Africa, Central Africa, North Africa/Asia) on one branch, and southern populations (North East Africa, East/Southern Africa and South West Africa) on the other. We review taxonomies and phylogenies of other large savannah mammals, illustrating that similar clades are found in other species. The described phylogeographic pattern is considered in relation to large scale environmental changes in Africa over the past 300,000 years, attributable to climate. Refugial areas, predicted by climate envelope models, further confirm the observed pattern. We support the revision of current lion taxonomy, as recognition of a northern and a southern subspecies is more parsimonious with the evolutionary history of the lion.

Phylogeographic Patterns in Africa and High Resolution Delineation of Genetic Clades in the Lion (Panthera leo).

PubMed

Bertola, L D; Jongbloed, H; van der Gaag, K J; de Knijff, P; Yamaguchi, N; Hooghiemstra, H; Bauer, H; Henschel, P; White, P A; Driscoll, C A; Tende, T; Ottosson, U; Saidu, Y; Vrieling, K; de Iongh, H H

2016-08-04

Comparative phylogeography of African savannah mammals shows a congruent pattern in which populations in West/Central Africa are distinct from populations in East/Southern Africa. However, for the lion, all African populations are currently classified as a single subspecies (Panthera leo leo), while the only remaining population in Asia is considered to be distinct (Panthera leo persica). This distinction is disputed both by morphological and genetic data. In this study we introduce the lion as a model for African phylogeography. Analyses of mtDNA sequences reveal six supported clades and a strongly supported ancestral dichotomy with northern populations (West Africa, Central Africa, North Africa/Asia) on one branch, and southern populations (North East Africa, East/Southern Africa and South West Africa) on the other. We review taxonomies and phylogenies of other large savannah mammals, illustrating that similar clades are found in other species. The described phylogeographic pattern is considered in relation to large scale environmental changes in Africa over the past 300,000 years, attributable to climate. Refugial areas, predicted by climate envelope models, further confirm the observed pattern. We support the revision of current lion taxonomy, as recognition of a northern and a southern subspecies is more parsimonious with the evolutionary history of the lion.

Phylogeographic Patterns in Africa and High Resolution Delineation of Genetic Clades in the Lion (Panthera leo)

PubMed Central

Bertola, L. D.; Jongbloed, H.; van der Gaag, K. J.; de Knijff, P.; Yamaguchi, N.; Hooghiemstra, H.; Bauer, H.; Henschel, P.; White, P. A.; Driscoll, C. A.; Tende, T.; Ottosson, U.; Saidu, Y.; Vrieling, K.; de Iongh, H. H.

2016-01-01

Comparative phylogeography of African savannah mammals shows a congruent pattern in which populations in West/Central Africa are distinct from populations in East/Southern Africa. However, for the lion, all African populations are currently classified as a single subspecies (Panthera leo leo), while the only remaining population in Asia is considered to be distinct (Panthera leo persica). This distinction is disputed both by morphological and genetic data. In this study we introduce the lion as a model for African phylogeography. Analyses of mtDNA sequences reveal six supported clades and a strongly supported ancestral dichotomy with northern populations (West Africa, Central Africa, North Africa/Asia) on one branch, and southern populations (North East Africa, East/Southern Africa and South West Africa) on the other. We review taxonomies and phylogenies of other large savannah mammals, illustrating that similar clades are found in other species. The described phylogeographic pattern is considered in relation to large scale environmental changes in Africa over the past 300,000 years, attributable to climate. Refugial areas, predicted by climate envelope models, further confirm the observed pattern. We support the revision of current lion taxonomy, as recognition of a northern and a southern subspecies is more parsimonious with the evolutionary history of the lion. PMID:27488946

African rainforests: past, present and future

PubMed Central

Malhi, Yadvinder; Adu-Bredu, Stephen; Asare, Rebecca A.; Lewis, Simon L.; Mayaux, Philippe

2013-01-01

The rainforests are the great green heart of Africa, and present a unique combination of ecological, climatic and human interactions. In this synthesis paper, we review the past and present state processes of change in African rainforests, and explore the challenges and opportunities for maintaining a viable future for these biomes. We draw in particular on the insights and new analyses emerging from the Theme Issue on ‘African rainforests: past, present and future’ of Philosophical Transactions of the Royal Society B. A combination of features characterize the African rainforest biome, including a history of climate variation; forest expansion and retreat; a long history of human interaction with the biome; a relatively low plant species diversity but large tree biomass; a historically exceptionally high animal biomass that is now being severely hunted down; the dominance of selective logging; small-scale farming and bushmeat hunting as the major forms of direct human pressure; and, in Central Africa, the particular context of mineral- and oil-driven economies that have resulted in unusually low rates of deforestation and agricultural activity. We conclude by discussing how this combination of factors influences the prospects for African forests in the twenty-first century. PMID:23878339

Biodiversity hanging by a thread: the importance of fungal litter-trapping systems in tropical rainforests

PubMed Central

Snaddon, Jake L.; Turner, Edgar C.; Fayle, Tom M.; Khen, Chey V.; Eggleton, Paul; Foster, William A.

2012-01-01

The exceptionally high species richness of arthropods in tropical rainforests hinges on the complexity of the forest itself: that is, on features such as the high plant diversity, the layered nature of the canopy and the abundance and the diversity of epiphytes and litter. We here report on one important, but almost completely neglected, piece of this complex jigsaw—the intricate network of rhizomorph-forming fungi that ramify through the vegetation of the lower canopy and intercept falling leaf litter. We show that this litter-trapping network is abundant and intercepts substantial amounts of litter (257.3 kg ha−1): this exceeds the amount of material recorded in any other rainforest litter-trapping system. Experimental removal of this fungal network resulted in a dramatic reduction in both the abundance (decreased by 70.2 ± 4.1%) and morphospecies richness (decreased by 57.4 ± 5.1%) of arthropods. Since the lower canopy levels can contain the highest densities of arthropods, the proportion of the rainforest fauna dependent on the fungal networks is likely to be substantial. Fungal litter-trapping systems are therefore a crucial component of habitat complexity, providing a vital resource that contributes significantly to rainforest biodiversity. PMID:22188674

People, Parks and Rainforests.

ERIC Educational Resources Information Center

Singer, Judith Y.

1992-01-01

The MLE Learning Center, a publicly funded day care center and after-school program in Brooklyn, New York, helps children develop awareness of a global community by using local resources to teach the children about the rainforest. (LB)

Initial Design and Concept of Operations for a Clandestine Data Relay UUV To Circumvent Jungle Canopy Effects on Satellite Communications

DTIC Science & Technology

2011-09-01

rainforests are the darkest areas, corresponding to on average of 7 m2 of leaves per m2 of ground. (From ) ......3 Figure 2. A picture of the Niger River...eastern India, or cartels and narco-terrorists of the Amazon river valley, they all share a number of things in common, number one among them being...synonymous with rainforest , and will be used interchangeably. By definition, the rainforest is one of the 2 Earth’s major biomes, and is further

Lack of genetic structure among ecologically adapted populations of an Australian rainforest Drosophila species as indicated by microsatellite markers and mitochondrial DNA sequences.

PubMed

Schiffer, Michele; Kennington, W J; Hoffmann, A A; Blacket, M J

2007-04-01

Although fragmented rainforest environments represent hotspots for invertebrate biodiversity, few genetic studies have been conducted on rainforest invertebrates. Thus, it is not known if invertebrate species in rainforests are highly genetically fragmented, with the potential for populations to show divergent selection responses, or if there are low levels of gene flow sufficient to maintain genetic homogeneity among fragmented populations. Here we use microsatellite markers and DNA sequences from the mitochondrial ND5 locus to investigate genetic differences among Drosophila birchii populations from tropical rainforests in Queensland, Australia. As found in a previous study, mitochondrial DNA diversity was low with no evidence for population differentiation among rainforest fragments. The pattern of mitochondrial haplotype variation was consistent with D. birchii having undergone substantial past population growth. Levels of nuclear genetic variation were high in all populations while F(ST) values were very low, even for flies from geographically isolated areas of rainforest. No significant differentiation was observed between populations on either side of the Burdekin Gap (a long-term dry corridor), although there was evidence for higher gene diversity in low-latitude populations. Spatial autocorrelation coefficients were low and did not differ significantly from random, except for one locus which revealed a clinal-like pattern. Comparisons of microsatellite differentiation contrasted with previously established clinal patterns in quantitative traits in D. birchii, and indicate that the patterns in quantitative traits are likely to be due to selection. These results suggest moderate gene flow in D. birchii over large distances. Limited population structure in this species appears to be due to recent range expansions or cycles of local extinctions followed by recolonizations/expansions. Nevertheless, patterns of local adaptation have developed in D. birchii that may result in populations showing different selection responses when faced with environmental change.

Phylogenetic relationships within anuran clade Terrarana, with emphasis on the placement of Brazilian Atlantic rainforest frogs genus Ischnocnema (Anura: Brachycephalidae).

PubMed

Canedo, Clarissa; Haddad, Célio F B

2012-11-01

We present a phylogenetic hypothesis of the anuran clade Terrarana based on partial sequences of nuclear (Tyr and RAG1) and mitochondrial (12S, tRNA-Val, and 16S) genes, testing the monophyly of Ischnocnema and its species series. We performed maximum parsimony, maximum likelihood, and Bayesian inference analyses on 364 terminals: 11 outgroup terminals and 353 ingroup Terrarana terminals, including 139 Ischnocnema terminals (accounting for 29 of the 35 named Ischnocnema species) and 214 other Terrarana terminals within the families Brachycephalidae, Ceuthomantidae, Craugastoridae, and Eleutherodactylidae. Different optimality criteria produced similar results and mostly recovered the currently accepted families and genera. According to these topologies, Ischnocnema is not a monophyletic group. We propose new combinations for three species, relocating them to Pristimantis, and render Eleutherodactylus bilineatus Bokermann, 1975 incertae sedis status within Holoadeninae. The rearrangements in Ischnocnema place it outside the northernmost Brazilian Atlantic rainforest, where the fauna of Terrarana comprises typical Amazonian genera. Copyright © 2012 Elsevier Inc. All rights reserved.

Simulation of Drought-induced Tree Mortality Using a New Individual and Hydraulic Trait-based Model (S-TEDy)

NASA Astrophysics Data System (ADS)

Sinha, T.; Gangodagamage, C.; Ale, S.; Frazier, A. G.; Giambelluca, T. W.; Kumagai, T.; Nakai, T.; Sato, H.

2017-12-01

Drought-related tree mortality at a regional scale causes drastic shifts in carbon and water cycling in Southeast Asian tropical rainforests, where severe droughts are projected to occur more frequently, especially under El Niño conditions. To provide a useful tool for projecting the tropical rainforest dynamics under climate change conditions, we developed the Spatially Explicit Individual-Based (SEIB) Dynamic Global Vegetation Model (DGVM) applicable to simulating mechanistic tree mortality induced by the climatic impacts via individual-tree-scale ecophysiology such as hydraulic failure and carbon starvation. In this study, we present the new model, SEIB-originated Terrestrial Ecosystem Dynamics (S-TEDy) model, and the computation results were compared with observations collected at a field site in a Bornean tropical rainforest. Furthermore, after validating the model's performance, numerical experiments addressing a future of the tropical rainforest were conducted using some global climate model (GCM) simulation outputs.

A Multiscale Simulation Framework to Investigate Hydrobiogeochemical Processes in the Groundwater-Surface Water Interaction Zone

NASA Astrophysics Data System (ADS)

Scheibe, T. D.; Yang, X.; Song, X.; Chen, X.; Hammond, G. E.; Song, H. S.; Hou, Z.; Murray, C. J.; Tartakovsky, A. M.; Tartakovsky, G.; Yang, X.; Zachara, J. M.

2016-12-01

Drought-related tree mortality at a regional scale causes drastic shifts in carbon and water cycling in Southeast Asian tropical rainforests, where severe droughts are projected to occur more frequently, especially under El Niño conditions. To provide a useful tool for projecting the tropical rainforest dynamics under climate change conditions, we developed the Spatially Explicit Individual-Based (SEIB) Dynamic Global Vegetation Model (DGVM) applicable to simulating mechanistic tree mortality induced by the climatic impacts via individual-tree-scale ecophysiology such as hydraulic failure and carbon starvation. In this study, we present the new model, SEIB-originated Terrestrial Ecosystem Dynamics (S-TEDy) model, and the computation results were compared with observations collected at a field site in a Bornean tropical rainforest. Furthermore, after validating the model's performance, numerical experiments addressing a future of the tropical rainforest were conducted using some global climate model (GCM) simulation outputs.

Logging cuts the functional importance of invertebrates in tropical rainforest

PubMed Central

Ewers, Robert M.; Boyle, Michael J. W.; Gleave, Rosalind A.; Plowman, Nichola S.; Benedick, Suzan; Bernard, Henry; Bishop, Tom R.; Bakhtiar, Effendi Y.; Chey, Vun Khen; Chung, Arthur Y. C.; Davies, Richard G.; Edwards, David P.; Eggleton, Paul; Fayle, Tom M.; Hardwick, Stephen R.; Homathevi, Rahman; Kitching, Roger L.; Khoo, Min Sheng; Luke, Sarah H.; March, Joshua J.; Nilus, Reuben; Pfeifer, Marion; Rao, Sri V.; Sharp, Adam C.; Snaddon, Jake L.; Stork, Nigel E.; Struebig, Matthew J.; Wearn, Oliver R.; Yusah, Kalsum M.; Turner, Edgar C.

2015-01-01

Invertebrates are dominant species in primary tropical rainforests, where their abundance and diversity contributes to the functioning and resilience of these globally important ecosystems. However, more than one-third of tropical forests have been logged, with dramatic impacts on rainforest biodiversity that may disrupt key ecosystem processes. We find that the contribution of invertebrates to three ecosystem processes operating at three trophic levels (litter decomposition, seed predation and removal, and invertebrate predation) is reduced by up to one-half following logging. These changes are associated with decreased abundance of key functional groups of termites, ants, beetles and earthworms, and an increase in the abundance of small mammals, amphibians and insectivorous birds in logged relative to primary forest. Our results suggest that ecosystem processes themselves have considerable resilience to logging, but the consistent decline of invertebrate functional importance is indicative of a human-induced shift in how these ecological processes operate in tropical rainforests. PMID:25865801

The future of South East Asian rainforests in a changing landscape and climate.

PubMed

Hector, Andy; Fowler, David; Nussbaum, Ruth; Weilenmann, Maja; Walsh, Rory P D

2011-11-27

With a focus on the Danum Valley area of Sabah, Malaysian Borneo, this special issue has as its theme the future of tropical rainforests in a changing landscape and climate. The global environmental context to the issue is briefly given before the contents and rationale of the issue are summarized. Most of the papers are based on research carried out as part of the Royal Society South East Asia Rainforest Research Programme. The issue is divided into five sections: (i) the historical land-use and land management context; (ii) implications of land-use change for atmospheric chemistry and climate change; (iii) impacts of logging, forest fragmentation (particularly within an oil palm plantation landscape) and forest restoration on ecosystems and their functioning; (iv) the response and resilience of rainforest systems to climatic and land-use change; and (v) the scientific messages and policy implications arising from the research findings presented in the issue.

Logging cuts the functional importance of invertebrates in tropical rainforest.

PubMed

Ewers, Robert M; Boyle, Michael J W; Gleave, Rosalind A; Plowman, Nichola S; Benedick, Suzan; Bernard, Henry; Bishop, Tom R; Bakhtiar, Effendi Y; Chey, Vun Khen; Chung, Arthur Y C; Davies, Richard G; Edwards, David P; Eggleton, Paul; Fayle, Tom M; Hardwick, Stephen R; Homathevi, Rahman; Kitching, Roger L; Khoo, Min Sheng; Luke, Sarah H; March, Joshua J; Nilus, Reuben; Pfeifer, Marion; Rao, Sri V; Sharp, Adam C; Snaddon, Jake L; Stork, Nigel E; Struebig, Matthew J; Wearn, Oliver R; Yusah, Kalsum M; Turner, Edgar C

2015-04-13

Invertebrates are dominant species in primary tropical rainforests, where their abundance and diversity contributes to the functioning and resilience of these globally important ecosystems. However, more than one-third of tropical forests have been logged, with dramatic impacts on rainforest biodiversity that may disrupt key ecosystem processes. We find that the contribution of invertebrates to three ecosystem processes operating at three trophic levels (litter decomposition, seed predation and removal, and invertebrate predation) is reduced by up to one-half following logging. These changes are associated with decreased abundance of key functional groups of termites, ants, beetles and earthworms, and an increase in the abundance of small mammals, amphibians and insectivorous birds in logged relative to primary forest. Our results suggest that ecosystem processes themselves have considerable resilience to logging, but the consistent decline of invertebrate functional importance is indicative of a human-induced shift in how these ecological processes operate in tropical rainforests.

Tracing an invasion: landbridges, refugia, and the phylogeography of the Neotropical rattlesnake (Serpentes: Viperidae: Crotalus durissus).

PubMed

Wüster, Wolfgang; Ferguson, Julia E; Quijada-Mascareñas, J Adrian; Pook, Catharine E; Salomão, Maria da Graça; Thorpe, Roger S

2005-04-01

Abstract Pleistocene fragmentation of the Amazonian rainforest has been hypothesized to be a major cause of Neotropical speciation and diversity. However, the role and even the reality of Pleistocene forest refugia have attracted much scepticism. In Amazonia, previous phylogeographical studies have focused mostly on organisms found in the forests themselves, and generally found speciation events to have predated the Pleistocene. However, molecular studies of open-formation taxa found both north and south of the Amazonian forests, probably because of vicariance resulting from expansion of the rainforests, may provide novel insights into the age of continuous forest cover across the Amazon basin. Here, we analyse three mitochondrial genes to infer the phylogeography of one such trans-Amazonian vicariant, the Neotropical rattlesnake (Crotalus durissus), which occupies primarily seasonal formations from Mexico to Argentina, but avoids the rainforests of Central and tropical South America. The phylogeographical pattern is consistent with gradual dispersal along the Central American Isthmus, followed by more rapid dispersal into and across South America after the uplift of the Isthmus of Panama. Low sequence divergence between populations from north and south of the Amazon rainforest is consistent with mid-Pleistocene divergence, approximately 1.1 million years ago (Ma). This suggests that the Amazonian rainforests must have become fragmented or at least shrunk considerably during that period, lending support to the Pleistocene refugia theory as an important cause of distribution patterns, if not necessarily speciation, in Amazonian forest organisms. These results highlight the potential of nonforest species to contribute to an understanding of the history of the Amazonian rainforests themselves.

Hunting in the Rainforest and Mayaro Virus Infection: An emerging Alphavirus in Ecuador

PubMed Central

Izurieta, Ricardo O; Macaluso, Maurizio; Watts, Douglas M; Tesh, Robert B; Guerra, Bolivar; Cruz, Ligia M; Galwankar, Sagar; Vermund, Sten H

2011-01-01

Objectives: The objectives of this report were to document the potential presence of Mayaro virus infection in Ecuador and to examine potential risk factors for Mayaro virus infection among the personnel of a military garrison in the Amazonian rainforest. Materials and Methods: The study population consisted of the personnel of a garrison located in the Ecuadorian Amazonian rainforest. The cross-sectional study employed interviews and seroepidemiological methods. Humoral immune response to Mayaro virus infection was assessed by evaluating IgM- and IgG-specific antibodies using ELISA. Results: Of 338 subjects studied, 174 were from the Coastal zone of Ecuador, 73 from Andean zone, and 91 were native to the Amazonian rainforest. Seroprevalence of Mayaro virus infection was more than 20 times higher among Amazonian natives (46%) than among subjects born in other areas (2%). Conclusions: Age and hunting in the rainforest were significant predictors of Mayaro virus infection overall and among Amazonian natives. The results provide the first demonstration of the potential presence of Mayaro virus infection in Ecuador and a systematic evaluation of risk factors for the transmission of this alphavirus. The large difference in prevalence rates between Amazonian natives and other groups and between older and younger natives suggest that Mayaro virus is endemic and enzootic in the rainforest, with sporadic outbreaks that determine differences in risk between birth cohorts of natives. Deep forest hunting may selectively expose native men, descendants of the Shuar and Huaronai ethnic groups, to the arthropod vectors of Mayaro virus in areas close to primate reservoirs. PMID:22223990

Measuring volatile organic compounds and stable isotopes emitted from trees and soils of the Biosphere 2 Rainforest

NASA Astrophysics Data System (ADS)

Meraz, J. C.; Meredith, L. K.; Van Haren, J. L. M.; Volkmann, T. H. M.

2017-12-01

Rainforest trees and soils play an important role in volatile organic compound (VOC) emissions. It is known that many rainforest tree species emit these organic compounds, such as terpenes, which can have an impact on the atmosphere and can be indicative of their metabolic functions. Some VOCs also absorb infrared radiation at wavelengths at which water isotopes are measured with laser spectrometers. Normal concentrations are not high enough for ambient sampling, but increased concentrations resulting from soil and plant samples extracted using equilibrium methods affect observed isotope ratios. There is thus a need to characterize volatile emissions from soil and plant samples, and to develop better methods to account for VOC interference during water isotope measurements. In this study, we collected soil and leaf samples from plants of the Biosphere 2 Rainforest Biome, a mesocosm system created to stimulate natural tropical rainforest habitats . Volatile concentrations were measured using a Gasmet DX4015 FTIR analyzer and a custom sampling system with sulfur hexafluoride (SF6) used as a tracer gas to test for leakage, and a commercial laser spectrometer was used for isotopic analysis. We determined that the different types of tree species emit different kinds of VOCs, such as isoprenes, alcohols, and aldehydes, that will potentially have to be accounted for. This study will help build the understanding of which organic compounds are emitted and develop new methods to test for water isotopes and gas fluxes in clear and precise measures. Such measures can help characterize the functioning of environmental systems such as the Biosphere 2 Rainforest Biome.

Climate change, allergy and asthma, and the role of tropical forests.

PubMed

D'Amato, Gennaro; Vitale, Carolina; Rosario, Nelson; Neto, Herberto Josè Chong; Chong-Silva, Deborah Carla; Mendonça, Francisco; Perini, Josè; Landgraf, Loraine; Solé, Dirceu; Sánchez-Borges, Mario; Ansotegui, Ignacio; D'Amato, Maria

2017-01-01

Tropical forests cover less than 10 per cent of all land area (1.8 × 107 km 2 ) and over half of the tropical-forest area (1.1 × 107 Km 2 ) is represented by humid tropical forests (also called tropical rainforests). The Amazon basin contains the largest rainforest on Earth, almost 5.8 million km 2 , and occupies about 40% of South America; more than 60% of the basin is located in Brazil and the rest in Bolivia, Colombia, Ecuador, French Guiana, Guyana, Peru, Suriname and Venezuela. Over the past decade the positive role of tropical rainforests in capturing large amounts of atmospheric carbon dioxide (CO 2 ) has been demonstrated. In response to the increase in atmospheric CO 2 concentration, tropical forests act as a global carbon sink. Accumulation of carbon in the tropical terrestrial biosphere strongly contributes to slowing the rate of increase of CO 2 into the atmosphere, thus resulting in the reduction of greenhouse gas effect. Tropical rainforests have been estimated to account for 32-36% of terrestrial Net Primary Productivity (NPP) that is the difference between total forest photosynthesis and plant respiration. Tropical rainforests have been acting as a strong carbon sink in this way for decades. However, over the past years, increased concentrations of greenhouse gases, and especially CO 2 , in the atmosphere have significantly affected the net carbon balance of tropical rainforests, and have warmed the planet substantially driving climate changes through more severe and prolonged heat waves, variability in temperature, increased air pollution, forest fires, droughts, and floods. The role of tropical forests in mitigating climate change is therefore critical. Over the past 30 years almost 600,000 km 2 have been deforested in Brazil alone due to the rapid development of Amazonia, this is the reason why currently the region is one of the 'hotspots' of global environmental change on the planet. Deforestation represents the second largest anthropogenic source of CO 2 to the atmosphere, after fossil fuel combustion. There are many causes of deforestation, including socioeconomic and natural factors, such as clear-cutting for agriculture, ranching and development, unsustainable logging for timber, as well as droughts, fires and degradation due to climate change. About natural causes of forest degradation, in the context of the Amazon, the major agent of change in the forest ecosystem would most likely be decreased dry-season precipitation. Of the 23 global climate models employed by the Intergovernmental Panel on Climate Change (IPCC) in their 2007 report, 50-70% predict a substantial (above 20%) reduction of dry-season rainfall in eastern Amazonia under mid-range greenhouse gas emissions scenarios, 40% in central Amazonia and 20% in the west. While annual carbon emissions from fossil-fuel combustion have been continually increasing since 1960s, historical trends of deforestation and associated carbon emissions have remained poorly understood.

Nuclear genomes distinguish cryptic species suggested by their DNA barcodes and ecology

PubMed Central

Janzen, Daniel H.; Burns, John M.; Cong, Qian; Hallwachs, Winnie; Dapkey, Tanya; Manjunath, Ramya; Hajibabaei, Mehrdad; Hebert, Paul D. N.; Grishin, Nick V.

2017-01-01

DNA sequencing brings another dimension to exploration of biodiversity, and large-scale mitochondrial DNA cytochrome oxidase I barcoding has exposed many potential new cryptic species. Here, we add complete nuclear genome sequencing to DNA barcoding, ecological distribution, natural history, and subtleties of adult color pattern and size to show that a widespread neotropical skipper butterfly known as Udranomia kikkawai (Weeks) comprises three different species in Costa Rica. Full-length barcodes obtained from all three century-old Venezuelan syntypes of U. kikkawai show that it is a rainforest species occurring from Costa Rica to Brazil. The two new species are Udranomia sallydaleyae Burns, a dry forest denizen occurring from Costa Rica to Mexico, and Udranomia tomdaleyi Burns, which occupies the junction between the rainforest and dry forest and currently is known only from Costa Rica. Whereas the three species are cryptic, differing but slightly in appearance, their complete nuclear genomes totaling 15 million aligned positions reveal significant differences consistent with their 0.00065-Mbp (million base pair) mitochondrial barcodes and their ecological diversification. DNA barcoding of tropical insects reared by a massive inventory suggests that the presence of cryptic species is a widespread phenomenon and that further studies will substantially increase current estimates of insect species richness. PMID:28716927

Glacial vicariance in Eurasia: mitochondrial DNA evidence from Scots pine for a complex heritage involving genetically distinct refugia at mid-northern latitudes and in Asia Minor

PubMed Central

Naydenov, Krassimir; Senneville, Sauphie; Beaulieu, Jean; Tremblay, Francine; Bousquet, Jean

2007-01-01

Background At the last glacial maximum, Fennoscandia was covered by an ice sheet while the tundra occupied most of the rest of northern Eurasia. More or less disjunct refugial populations of plants were dispersed in southern Europe, often trapped between mountain ranges and seas. Genetic and paleobotanical evidences indicate that these populations have contributed much to Holocene recolonization of more northern latitudes. Less supportive evidence has been found for the existence of glacial populations located closer to the ice margin. Scots pine (Pinus sylvestris L.) is a nordic conifer with a wide natural range covering much of Eurasia. Fractures in its extant genetic structure might be indicative of glacial vicariance and how different refugia contributed to the current distribution at the continental level. The population structure of Scots pine was investigated on much of its Eurasian natural range using maternally inherited mitochondrial DNA polymorphisms. Results A novel polymorphic region of the Scots pine mitochondrial genome has been identified, the intron 1 of nad7, with three variants caused by insertions-deletions. From 986 trees distributed among 54 populations, four distinct multi-locus mitochondrial haplotypes (mitotypes) were detected based on the three nad7 intron 1 haplotypes and two previously reported size variants for nad1 intron B/C. Population differentiation was high (GST = 0.657) and the distribution of the mitotypes was geographically highly structured, suggesting at least four genetically distinct ancestral lineages. A cosmopolitan lineage was widely distributed in much of Europe throughout eastern Asia. A previously reported lineage limited to the Iberian Peninsula was confirmed. A new geographically restricted lineage was found confined to Asia Minor. A new lineage was restricted to more northern latitudes in northeastern Europe and the Baltic region. Conclusion The contribution of the various ancestral lineages to the current distribution of Scots pine was asymmetric and extant endemism reflected the presence of large geographic barriers to migration. The results suggest a complex biogeographical history with glacial refugia shared with temperate plant species in southern European Peninsulas and Asia Minor, and a genetically distinct glacial population located more North. These results confirm recent observations for cold tolerant species about the possible existence of refugial populations at mid-northern latitudes contributing significantly to the recolonization of northern Europe. Thus, Eurasian populations of nordic plant species might not be as genetically homogenous as assumed by simply considering them as offsets of glacial populations located in southern peninsulas. As such, they might have evolved distinctive genetic adaptations during glacial vicariance, worth evaluating and considering for conservation. PMID:18034901

Seven hundred years of human-driven and climate-influenced fire activity in a British Columbia coastal temperate rainforest

PubMed Central

Gavin, Daniel G.; Starzomski, Brian M.

2016-01-01

While wildland fire is globally most common at the savannah-grassland ecotone, there is little evidence of fire in coastal temperate rainforests. We reconstructed fire activity with a ca 700-year fire history derived from fire scars and stand establishment from 30 sites in a very wet (up to 4000 mm annual precipitation) temperate rainforest in coastal British Columbia, Canada. Drought and warmer temperatures in the year prior were positively associated with fire events though there was little coherence of climate indices on the years of fires. At the decadal scale, fires were more likely to occur after positive El Niño-Southern Oscillation and Pacific Decadal Oscillation phases and exhibited 30-year periods of synchrony with the negative phase of the Arctic Oscillation. Fire frequency was significantly inversely correlated with the distance from former Indigenous habitation sites and fires ceased following cultural disorganization caused by disease and other European impacts in the late nineteenth century. Indigenous people were likely to have been the primary ignition source in this and many coastal temperate rainforest settings. These data are directly relevant to contemporary forest management and discredit the myth of coastal temperate rainforests as pristine landscapes. PMID:27853581

Phthalate pollution in an Amazonian rainforest.

PubMed

Lenoir, Alain; Boulay, Raphaël; Dejean, Alain; Touchard, Axel; Cuvillier-Hot, Virginie

2016-08-01

Phthalates are ubiquitous contaminants and endocrine-disrupting chemicals that can become trapped in the cuticles of insects, including ants which were recognized as good bioindicators for such pollution. Because phthalates have been noted in developed countries and because they also have been found in the Arctic, a region isolated from direct anthropogenic influence, we hypothesized that they are widespread. So, we looked for their presence on the cuticle of ants gathered from isolated areas of the Amazonian rainforest and along an anthropogenic gradient of pollution (rainforest vs. road sides vs. cities in French Guiana). Phthalate pollution (mainly di(2-ethylhexyl) phthalate (DEHP)) was higher on ants gathered in cities and along road sides than on those collected in the pristine rainforest, indicating that it follows a human-mediated gradient of disturbance related to the use of plastics and many other products that contain phthalates in urban zones. Their presence varied with the ant species; the cuticle of Solenopsis saevissima traps higher amount of phthalates than that of compared species. However, the presence of phthalates in isolated areas of pristine rainforests suggests that they are associated both with atmospheric particles and in gaseous form and are transported over long distances by wind, resulting in a worldwide diffusion. These findings suggest that there is no such thing as a "pristine" zone.

Assessing tropical rainforest growth traits: Data - Model fusion in the Congo basin and beyond

NASA Astrophysics Data System (ADS)

Pietsch, Stephan

2017-04-01

Virgin forest ecosystems resemble the key reference level for natural tree growth dynamics. The mosaic cycle concept describes such dynamics as local disequilibria driven by patch level succession cycles of breakdown, regeneration, juvenescence and old growth. These cycles, however, may involve different traits of light demanding and shade tolerant species assemblies. In this work a data model fusion concept will be introduced to assess the differences in growth dynamics of the mosaic cycle of the Western Congolian Lowland Rainforest ecosystem. Field data from 34 forest patches located in an ice age forest refuge, recently pinpointed to the ground and still devoid of direct human impact up to today - resemble the data base. A 3D error assessment procedure versus BGC model simulations for the 34 patches revealed two different growth dynamics, consistent with observed growth traits of pioneer and late succession species assemblies of the Western Congolian Lowland rainforest. An application of the same procedure to Central American Pacific rainforests confirms the strength of the 3D error field data model fusion concept to Central American Pacific rainforests confirms the strength of the 3D error field data model fusion concept to assess different growth traits of the mosaic cycle of natural forest dynamics.

Ecological and socio-economic functions across tropical land use systems after rainforest conversion.

PubMed

Drescher, Jochen; Rembold, Katja; Allen, Kara; Beckschäfer, Philip; Buchori, Damayanti; Clough, Yann; Faust, Heiko; Fauzi, Anas M; Gunawan, Dodo; Hertel, Dietrich; Irawan, Bambang; Jaya, I Nengah S; Klarner, Bernhard; Kleinn, Christoph; Knohl, Alexander; Kotowska, Martyna M; Krashevska, Valentyna; Krishna, Vijesh; Leuschner, Christoph; Lorenz, Wolfram; Meijide, Ana; Melati, Dian; Nomura, Miki; Pérez-Cruzado, César; Qaim, Matin; Siregar, Iskandar Z; Steinebach, Stefanie; Tjoa, Aiyen; Tscharntke, Teja; Wick, Barbara; Wiegand, Kerstin; Kreft, Holger; Scheu, Stefan

2016-05-19

Tropical lowland rainforests are increasingly threatened by the expansion of agriculture and the extraction of natural resources. In Jambi Province, Indonesia, the interdisciplinary EFForTS project focuses on the ecological and socio-economic dimensions of rainforest conversion to jungle rubber agroforests and monoculture plantations of rubber and oil palm. Our data confirm that rainforest transformation and land use intensification lead to substantial losses in biodiversity and related ecosystem functions, such as decreased above- and below-ground carbon stocks. Owing to rapid step-wise transformation from forests to agroforests to monoculture plantations and renewal of each plantation type every few decades, the converted land use systems are continuously dynamic, thus hampering the adaptation of animal and plant communities. On the other hand, agricultural rainforest transformation systems provide increased income and access to education, especially for migrant smallholders. Jungle rubber and rubber monocultures are associated with higher financial land productivity but lower financial labour productivity compared to oil palm, which influences crop choice: smallholders that are labour-scarce would prefer oil palm while land-scarce smallholders would prefer rubber. Collecting long-term data in an interdisciplinary context enables us to provide decision-makers and stakeholders with scientific insights to facilitate the reconciliation between economic interests and ecological sustainability in tropical agricultural landscapes. © 2016 The Authors.

Ecological and socio-economic functions across tropical land use systems after rainforest conversion

PubMed Central

Rembold, Katja; Allen, Kara; Beckschäfer, Philip; Buchori, Damayanti; Clough, Yann; Faust, Heiko; Fauzi, Anas M.; Gunawan, Dodo; Hertel, Dietrich; Irawan, Bambang; Jaya, I. Nengah S.; Klarner, Bernhard; Kleinn, Christoph; Knohl, Alexander; Kotowska, Martyna M.; Krashevska, Valentyna; Krishna, Vijesh; Leuschner, Christoph; Lorenz, Wolfram; Meijide, Ana; Melati, Dian; Nomura, Miki; Pérez-Cruzado, César; Qaim, Matin; Siregar, Iskandar Z.; Steinebach, Stefanie; Tjoa, Aiyen; Tscharntke, Teja; Wick, Barbara; Wiegand, Kerstin; Kreft, Holger; Scheu, Stefan

2016-01-01

Tropical lowland rainforests are increasingly threatened by the expansion of agriculture and the extraction of natural resources. In Jambi Province, Indonesia, the interdisciplinary EFForTS project focuses on the ecological and socio-economic dimensions of rainforest conversion to jungle rubber agroforests and monoculture plantations of rubber and oil palm. Our data confirm that rainforest transformation and land use intensification lead to substantial losses in biodiversity and related ecosystem functions, such as decreased above- and below-ground carbon stocks. Owing to rapid step-wise transformation from forests to agroforests to monoculture plantations and renewal of each plantation type every few decades, the converted land use systems are continuously dynamic, thus hampering the adaptation of animal and plant communities. On the other hand, agricultural rainforest transformation systems provide increased income and access to education, especially for migrant smallholders. Jungle rubber and rubber monocultures are associated with higher financial land productivity but lower financial labour productivity compared to oil palm, which influences crop choice: smallholders that are labour-scarce would prefer oil palm while land-scarce smallholders would prefer rubber. Collecting long-term data in an interdisciplinary context enables us to provide decision-makers and stakeholders with scientific insights to facilitate the reconciliation between economic interests and ecological sustainability in tropical agricultural landscapes. PMID:27114577

Ecotourism: The Santa Elena Rainforest Project.

ERIC Educational Resources Information Center

Wearing, Stephen

1993-01-01

Describes an ecotourism project in which the community of Santa Elena, Costa Rica, are developing a rainforest reserve on government land leased permanently to the local high school. Discusses the impact of the project on the community's economy and environment. (Contains 30 references.) (MDH)

Educational Biography of an Arakmbut.

ERIC Educational Resources Information Center

Sueyo, Hector

2003-01-01

An indigenous Peruvian sociologist of the Arakmbut people describes his educational experiences, including Harakmbut education for survival in the Peruvian rainforest, primary education in a village school with a national "Spanified" curriculum, scholarships that enabled an academic secondary and higher education outside the rainforest,…

Negative Impacts of Human Land Use on Dung Beetle Functional Diversity

PubMed Central

Barragán, Felipe; Moreno, Claudia E.; Escobar, Federico; Halffter, Gonzalo; Navarrete, Dario

2011-01-01

The loss of biodiversity caused by human activity is assumed to alter ecosystem functioning. However our understanding of the magnitude of the effect of these changes on functional diversity and their impact on the dynamics of ecological processes is still limited. We analyzed the functional diversity of copro-necrophagous beetles under different conditions of land use in three Mexican biosphere reserves. In Montes Azules pastures, forest fragments and continuous rainforest were analyzed, in Los Tuxtlas rainforest fragments of different sizes were analyzed and in Barranca de Metztitlán two types of xerophile scrub with different degrees of disturbance from grazing were analyzed. We assigned dung beetle species to functional groups based on food relocation, beetle size, daily activity period and food preferences, and as measures of functional diversity we used estimates based on multivariate methods. In Montes Azules functional richness was lower in the pastures than in continuous rainforest and rainforest fragments, but fragments and continuous forest include functionally redundant species. In small rainforest fragments (<5 ha) in Los Tuxtlas, dung beetle functional richness was lower than in large rainforest fragments (>20 ha). Functional evenness and functional dispersion did not vary among habitat types or fragment size in these reserves. In contrast, in Metztitlán, functional richness and functional dispersion were different among the vegetation types, but differences were not related to the degree of disturbance by grazing. More redundant species were found in submontane than in crassicaule scrub. For the first time, a decrease in the functional diversity in communities of copro-necrophagous beetles resulting from changes in land use is documented, the potential implications for ecosystem functioning are discussed and a series of variables that could improve the evaluation of functional diversity for this biological group is proposed. PMID:21448292

Overview of the Distribution, Habitat Association and Impact of Exotic Ants on Native Ant Communities in New Caledonia

PubMed Central

Berman, Maïa; Andersen, Alan N.; Hély, Christelle; Gaucherel, Cédric

2013-01-01

Ants are among the most ubiquitous and harmful invaders worldwide, but there are few regional studies of their relationships with habitat and native ant communities. New Caledonia has a unique and diverse ant fauna that is threatened by exotic ants, but broad-scale patterns of exotic and native ant community composition in relation to habitat remain poorly documented. We conducted a systematic baiting survey of 56 sites representing the main New Caledonian habitat types: rainforest on ultramafic soils (15 sites), rainforest on volcano-sedimentary soils (13), maquis shrubland (15), Melaleuca-dominated savannas (11) and Acacia spirorbis thickets (2). We collected a total of 49 species, 13 of which were exotic. Only five sites were free of exotic species, and these were all rainforest. The five most abundant exotic species differed in their habitat association, with Pheidole megacephala associated with rainforests, Brachymyrmex cf. obscurior with savanna, and Wasmannia auropunctata and Nylanderia vaga present in most habitats. Anoplolepis gracilipes occurred primarily in maquis-shrubland, which contrasts with its rainforest affinity elsewhere. Multivariate analysis of overall ant species composition showed strong differentiation of sites according to the distribution of exotic species, and these patterns were maintained at the genus and functional group levels. Native ant composition differed at invaded versus uninvaded rainforest sites, in the absence of differences in habitat variables. Generalised Myrmicinae and Forest Opportunists were particularly affected by invasion. There was a strong negative relationship between the abundance of W. auropunctata and native ant abundance and richness. This emphasizes that, in addition to dominating many ant communities numerically, some exotic species, and in particular W. auropunctata, have a marked impact on native ant communities. PMID:23840639

Negative impacts of human land use on dung beetle functional diversity.

PubMed

Barragán, Felipe; Moreno, Claudia E; Escobar, Federico; Halffter, Gonzalo; Navarrete, Dario

2011-03-23

The loss of biodiversity caused by human activity is assumed to alter ecosystem functioning. However our understanding of the magnitude of the effect of these changes on functional diversity and their impact on the dynamics of ecological processes is still limited. We analyzed the functional diversity of copro-necrophagous beetles under different conditions of land use in three Mexican biosphere reserves. In Montes Azules pastures, forest fragments and continuous rainforest were analyzed, in Los Tuxtlas rainforest fragments of different sizes were analyzed and in Barranca de Metztitlán two types of xerophile scrub with different degrees of disturbance from grazing were analyzed. We assigned dung beetle species to functional groups based on food relocation, beetle size, daily activity period and food preferences, and as measures of functional diversity we used estimates based on multivariate methods. In Montes Azules functional richness was lower in the pastures than in continuous rainforest and rainforest fragments, but fragments and continuous forest include functionally redundant species. In small rainforest fragments (<5 ha) in Los Tuxtlas, dung beetle functional richness was lower than in large rainforest fragments (>20 ha). Functional evenness and functional dispersion did not vary among habitat types or fragment size in these reserves. In contrast, in Metztitlán, functional richness and functional dispersion were different among the vegetation types, but differences were not related to the degree of disturbance by grazing. More redundant species were found in submontane than in crassicaule scrub. For the first time, a decrease in the functional diversity in communities of copro-necrophagous beetles resulting from changes in land use is documented, the potential implications for ecosystem functioning are discussed and a series of variables that could improve the evaluation of functional diversity for this biological group is proposed.

Spatial patterns and recent trends in the climate of tropical rainforest regions.

PubMed

Malhi, Yadvinder; Wright, James

2004-03-29

We present an analysis of the mean climate and climatic trends of tropical rainforest regions over the period 1960-1998, with the aid of explicit maps of forest cover and climatological databases. Until the mid-1970s most regions showed little trend in temperature, and the western Amazon experienced a net cooling probably associated with an interdecadal oscillation. Since the mid-1970s, all tropical rainforest regions have experienced a strong warming at a mean rate of 0.26 +/- 0.05 degrees C per decade, in synchrony with a global rise in temperature that has been attributed to the anthropogenic greenhouse effect. Over the study period, precipitation appears to have declined in tropical rainforest regions at a rate of 1.0 +/- 0.8% per decade (p < 5%), declining sharply in northern tropical Africa (at 3-4% per decade), declining marginally in tropical Asia and showing no significant trend in Amazonia. There is no evidence so far of a decline in precipitation in eastern Amazonia, a region thought vulnerable to climate-change-induced drying. The strong drying trend in Africa suggests that this should be a priority study region for understanding the impact of drought on tropical rainforests. We develop and use a dry-season index to study variations in the length and intensity of the dry season. Only African and Indian tropical rainforests appear to have seen a significant increase in dry-season intensity. In terms of interannual variability, the El Niño-Southern Oscillation (ENSO) is the primary driver of temperature variations across the tropics and of precipitation fluctuations for large areas of the Americas and southeast Asia. The relation between ENSO and tropical African precipitation appears less direct.

South-East Asia's Trembling Rainforests.

ERIC Educational Resources Information Center

Laird, John

1991-01-01

This discussion focuses on potential solutions to the degradation of rainforests in Southeast Asia caused by indiscriminate logging, inappropriate road-construction techniques, forest fires, and the encroachment upon watersheds by both agricultural concerns and peasant farmers. Vignettes illustrate the impact of this degradation upon the animals,…

Light, temperature, and leaf nitrogen distribution in the tropical rain forest of Biosphere 2 and their importance in the mathematical models for global environmental changes

NASA Technical Reports Server (NTRS)

Tohda, Motofumi

1997-01-01

As the environmental changes occur throughout the world in rapid rate, we need to have further understandings for our planet. Since the ecosystems are so complex, it is almost impossible for us to integrate every factor. However, mathematical models are powerful tools which can be used to simulate those ecosystems with limited data. In this project, I collected light intensity, canopy leaf temperature and Air Handler (AHU) temperature, and nitrogen concentration in the leaves for different profiles in the rainforest mesocosm. These data will later be put into mathematical models such as "big-leaf" and "sun/shade" models to determine how these factors will affect CO2 exchange in the rainforest. As rainforests are diminishing from our planet and their existence is very important for all living things on earth, it is necessary for us to learn more about the unique system of rainforests and how we can co-exist rather than destroy.

ʻŌhiʻa Lehua rainforest: born among Hawaiian volcanoes, evolved in isolation: the story of a dynamic ecosystem with relevance to forests worldwide

USGS Publications Warehouse

Mueller-Dombois, Dieter; Jacobi, James D.; Boehmer, Hans Juergen; Price, Jonathan P.

2013-01-01

In the early 1970s, a multidisciplinary team of forest biologists began a study of Hawaiian ecosystems under the International Biological Program (IBP). Research focus was on the intact native ecosystems in and around Hawai'i Volcanoes National Park, in particular the ʻŌhiʻa Lehua rainforest. Patches of dead ʻŌhiʻa stands had been reported from the windward slopes of Mauna Loa and Mauna Kea. Subsequent air photo analyses by a team of US and Hawai'i State foresters discovered rapidly spreading ʻŌhiʻa dieback, also called ʻŌhiʻa forest decline. A killer disease was suspected to destroy the Hawaiian rain forest in the next 15-25 years. Ecological research continued with a focus on the dynamics of the Hawaiian rainforest. This book explains what really happened and why the ʻŌhiʻa rainforest survived in tact as everyone can witness today.

Unexpected seasonality in quantity and composition of Amazon rainforest air reactivity

PubMed Central

Nölscher, A. C.; Yañez-Serrano, A. M.; Wolff, S.; de Araujo, A. Carioca; Lavrič, J. V.; Kesselmeier, J.; Williams, J.

2016-01-01

The hydroxyl radical (OH) removes most atmospheric pollutants from air. The loss frequency of OH radicals due to the combined effect of all gas-phase OH reactive species is a measureable quantity termed total OH reactivity. Here we present total OH reactivity observations in pristine Amazon rainforest air, as a function of season, time-of-day and height (0–80 m). Total OH reactivity is low during wet (10 s−1) and high during dry season (62 s−1). Comparison to individually measured trace gases reveals strong variation in unaccounted for OH reactivity, from 5 to 15% missing in wet-season afternoons to mostly unknown (average 79%) during dry season. During dry-season afternoons isoprene, considered the dominant reagent with OH in rainforests, only accounts for ∼20% of the total OH reactivity. Vertical profiles of OH reactivity are shaped by biogenic emissions, photochemistry and turbulent mixing. The rainforest floor was identified as a significant but poorly characterized source of OH reactivity. PMID:26797390

Unexpected seasonality in quantity and composition of Amazon rainforest air reactivity.

PubMed

Nölscher, A C; Yañez-Serrano, A M; Wolff, S; de Araujo, A Carioca; Lavrič, J V; Kesselmeier, J; Williams, J

2016-01-22

The hydroxyl radical (OH) removes most atmospheric pollutants from air. The loss frequency of OH radicals due to the combined effect of all gas-phase OH reactive species is a measureable quantity termed total OH reactivity. Here we present total OH reactivity observations in pristine Amazon rainforest air, as a function of season, time-of-day and height (0-80 m). Total OH reactivity is low during wet (10 s(-1)) and high during dry season (62 s(-1)). Comparison to individually measured trace gases reveals strong variation in unaccounted for OH reactivity, from 5 to 15% missing in wet-season afternoons to mostly unknown (average 79%) during dry season. During dry-season afternoons isoprene, considered the dominant reagent with OH in rainforests, only accounts for ∼20% of the total OH reactivity. Vertical profiles of OH reactivity are shaped by biogenic emissions, photochemistry and turbulent mixing. The rainforest floor was identified as a significant but poorly characterized source of OH reactivity.

Trampling resistance of tropical rainforest soils and vegetation in the wet tropics of north east Australia.

PubMed

Talbot, L M; Turton, S M; Graham, A W

2003-09-01

Controlled trampling was conducted to investigate the trampling resistance of contrasting high fertility basaltic and low fertility rhyolitic soils and their associated highland tropical rainforest vegetation in north east Australia's Wet Tropics. Although this approach has been taken in numerous studies of trampling in a variety of ecosystem types (temperate and subtropical forest, alpine shrubland, coral reef and seagrass beds), the experimental method does not appear to have been previously applied in a tropical rainforest context. Ground vegetation cover and soil penetration resistance demonstrated variable responses to trampling. Trampling, most noticeably after 200 and 500 passes reduced organic litter cover. Bulk density increased with trampling intensity, particularly on basalt soils as rhyolite soils appeared somewhat resistant to the impacts of trampling. The permeability of the basalt and rhyolite soils decreased markedly with increased trampling intensity, even after only 75 passes. These findings suggest physical and hydrological changes may occur rapidly in tropical rainforest soils following low levels of trampling, particularly on basalt soils.

Unrealized diversity in an urban rainforest: A new species of Lygosoma (Squamata: Scincidae) from western Sarawak, Malaysia (Borneo).

PubMed

Karin, Benjamin R; Freitas, Elyse S; Shonleben, Samuel; Grismer, L Lee; Bauer, Aaron M; Das, Indraneil

2018-01-12

We collected two specimens of an undescribed species of Lygosoma from pitfall traps in an urban rainforest in Kuching and from the base of a forested hill in western Sarawak, East Malaysia. The new species is diagnosable from all south-east Asian congeners by morphological characters, and most closely resembles Lygosoma herberti from the Thai-Malay Peninsula. The new species shows substantial molecular divergence from its closest relatives in two protein-coding genes, one mitochondrial (ND1) and one nuclear (R35) that we sequenced for several south-east Asian congeners. We describe the new species on the basis of this distinct morphology and genetic divergence. It is the third species of Lygosoma known from Borneo, and highlights the continuing rise in lizard species diversity on the island. In addition, the discovery of this species from a small urban rainforest underscores the importance of preserving intact rainforest areas of any size in maintaining species diversity.

Doubling the estimate of invertebrate biomass in a rainforest canopy.

PubMed

Ellwood, Martin D F; Foster, William A

2004-06-03

Forest canopies represent the functional interface between 90% of the Earth's terrestrial biomass and the atmosphere and include some of the most threatened of all terrestrial ecosystems. However, we lack even a basic understanding of how the biomass of plants and animals is distributed throughout forest canopies, even though this information is vital for estimating energy flow, carbon cycling, resource use and the transfer of materials within this ecosystem. Here we measure the biomass of invertebrates living in a common rainforest epiphyte, describe a striking relationship between fern size and the biomass of animals within the ferns, and reveal that one large epiphyte may contain an invertebrate biomass similar to that found in the whole of the rest of the tree crown on which it is growing. Using these data, we show that including the fauna of these epiphytes--a neglected component in rainforest ecosystems--can more than double our estimate of the total invertebrate biomass in an entire rainforest canopy.

Rainfall interception from a lowland tropical rainforest in Brunei

NASA Astrophysics Data System (ADS)

Dykes, A. P.

1997-12-01

Results from a programme of throughfall measurements in a lowland tropical rainforest in Brunei, northwest Borneo, indicate that interception losses amount to 18% of the gross incident rainfall. The high annual rainfall experienced by the study area results in annual interception losses of around 800 mm, which may result in total annual evapotranspiration losses significantly higher than in other rainforest locations. An improved version of Gash's analytical interception model is tested on the available data using assumed values for the "forest" parameters, and is found to predict interception losses extremely well. The model predictions are based on an estimated evaporation rate during rainfall of 0.71 mm h -1. This is significantly higher than has been reported in other tropical studies. It is concluded that these results are distinctive when compared with previous results from rainforests, and that further, detailed work is required to establish whether the enhanced evaporation rate is due to advective effects associated with the maritime setting of the study area.

The Role of Deforestation in the Collapse of Classic Maya Civilization: Lessons for the Current Land Use Management in Northern Mesoamerica

NASA Astrophysics Data System (ADS)

Ray, D. K.; Nair, U. S.; Welch, R. M.; Lawton, R. O.; Oglesby, R. J.; Pielke, R. A.; Sever, T. A.; Irwin, D.

2005-12-01

The classic Maya civilization produced thriving cities that attained population densities comparable to modern day cities during the zenith of its growth approximately around 750 A.D. The Mayan civilization then experienced a catastrophic collapse between 750-950 A.D. Among the various hypothesis forwarded to explain the sudden collapse, one that has recently attracted attention, is the role of deforestation and decreases of regional rainfall that could have affected the day-to-day lives of the ancient Mayas. Deep-rooted rainforest vegetation has access to water stored in deep soil layers, and this deep water is made available to the hydrological cycle through transpiration. Removal of rainforests for agricultural purposes, which is accompanied by soil compaction and reduction in the organic material at the surface, leads to increased runoff and decreased soil water storage. Shallow-rooted vegetation that replaces the deep-rooted rainforests cannot efficiently access the moisture in the deep soil layers, reducing flux of water vapor to the atmosphere. In this study the Colorado State University Regional Atmospheric Modeling System (CSU RAMS) is utilized to examine differences in precipitation between current and forested conditions and between current and deforested conditions similar to those that archaeologists believe were prevalent prior to the collapse. Moreover, current deforestation rates in this region is converting the landscape into one that is similar to those prior to the Maya collapse. The simulated rainfall is compared against climatological rain gauge rainfall values. The statistical scores such as probability of detection, false alarm ratio, and the threat scores all compare favorably with those reported in the literature. Our results suggest that with the removal of forests the rainfall can be expected to decrease by 10 to 100mm in the Maya lowlands. Averaged over the entire Maya lowlands region, dry season rainfall for the forested conditions is 143.3mm compared to 142.7 mm for current conditions (a negligible decrease of 0.4% over the forested scenario). However, domain averaged dry season rainfall in the Maya lowlands decreases to 128.9mm for the deforested scenario, a decrease in 9.7% over current conditions. The model simulations suggest that to-date deforestation has played an insignificant role in creating drier conditions in the Mayan lowlands, except in the regions in northern Guatemala and adjacent Mexico. However, continued deforestation that would be representative of those prior to the collapse of the Maya civilization in the region can be expected to lead to additional decreases in dry season precipitation throughout the entire region by about 10mm to 100mm. Improper land use management in this region could lead to futures catastrophes for the modern humans similar

Nitrogen management is essential to prevent tropical oil palm plantations from causing ground-level ozone pollution

NASA Astrophysics Data System (ADS)

Hewitt, Nick; Lee, James

2010-05-01

More than half the world's rainforest has been lost to agriculture since the Industrial Revolution. Among the most widespread tropical crops is oil palm (Elaeis guineensis): global production now exceeds 35 million tonnes per year. In Malaysia, for example, 13% of land area is now oil palm plantation, compared with 1% in 1974. There are enormous pressures to increase palm oil production for food, domestic products, and, especially, biofuels. Greater use of palm oil for biofuel production is predicated on the assumption that palm oil is an ‘‘environmentally friendly'' fuel feedstock. Here we show, using measurements and models, that oil palm plantations in Malaysia directly emit more oxides of nitrogen and volatile organic compounds than rainforest. These compounds lead to the production of ground-level ozone (O3), an air pollutant that damages human health, plants, and materials, reduces crop productivity, and has effects on the Earth's climate. Our measurements show that, at present, O3 concentrations do not differ significantly over rainforest and adjacent oil palm plantation landscapes. However, our model calculations predict that if concentrations of oxides of nitrogen in Borneo are allowed to reach those currently seen over rural North America and Europe, ground-level O3 concentrations will reach 100 parts per billion (109) volume (ppbv) and exceed levels known to be harmful to human health. Our study provides an early warning of the urgent need to develop policies that manage nitrogen emissions if the detrimental effects of palm oil production on air quality and climate are to be avoided.

Nitrogen management is essential to prevent tropical oil palm plantations from causing ground-level ozone pollution

PubMed Central

Hewitt, C. N.; MacKenzie, A. R.; Di Carlo, P.; Di Marco, C. F.; Dorsey, J. R.; Evans, M.; Fowler, D.; Gallagher, M. W.; Hopkins, J. R.; Jones, C. E.; Langford, B.; Lee, J. D.; Lewis, A. C.; Lim, S. F.; McQuaid, J.; Misztal, P.; Moller, S. J.; Monks, P. S.; Nemitz, E.; Oram, D. E.; Owen, S. M.; Phillips, G. J.; Pugh, T. A. M.; Pyle, J. A.; Reeves, C. E.; Ryder, J.; Siong, J.; Skiba, U.; Stewart, D. J.

2009-01-01

More than half the world's rainforest has been lost to agriculture since the Industrial Revolution. Among the most widespread tropical crops is oil palm (Elaeis guineensis): global production now exceeds 35 million tonnes per year. In Malaysia, for example, 13% of land area is now oil palm plantation, compared with 1% in 1974. There are enormous pressures to increase palm oil production for food, domestic products, and, especially, biofuels. Greater use of palm oil for biofuel production is predicated on the assumption that palm oil is an “environmentally friendly” fuel feedstock. Here we show, using measurements and models, that oil palm plantations in Malaysia directly emit more oxides of nitrogen and volatile organic compounds than rainforest. These compounds lead to the production of ground-level ozone (O3), an air pollutant that damages human health, plants, and materials, reduces crop productivity, and has effects on the Earth's climate. Our measurements show that, at present, O3 concentrations do not differ significantly over rainforest and adjacent oil palm plantation landscapes. However, our model calculations predict that if concentrations of oxides of nitrogen in Borneo are allowed to reach those currently seen over rural North America and Europe, ground-level O3 concentrations will reach 100 parts per billion (109) volume (ppbv) and exceed levels known to be harmful to human health. Our study provides an early warning of the urgent need to develop policies that manage nitrogen emissions if the detrimental effects of palm oil production on air quality and climate are to be avoided. PMID:19841269

The genetic structure of the mountain forest butterfly Erebia euryale unravels the late Pleistocene and postglacial history of the mountain coniferous forest biome in Europe.

PubMed

Schmitt, Thomas; Haubrich, Karola

2008-05-01

The distribution of the mountain coniferous forest biome in Europe throughout time is not sufficiently understood. One character species of this habitat type is the large ringlet, Erebia euryale well reflecting the extension of this biome today, and the genetic differentiation of this species among and within mountain systems may unravel the late Pleistocene history of this habitat type. We therefore analysed the allozyme pattern of 381 E. euryale individuals from 11 populations in four different European mountain systems (Pyrenees, Alps, Carpathians, Rila). All loci analysed were polymorphic. The mean F(ST) over all samples was high (20%). Furthermore, the mean genetic distance among samples was quite high (0.049). We found four different groups well supported by cluster analyses, bootstraps and hierarchical variance analyses: Pyrenees, western Alps, eastern Alps and southeastern Europe (Carpathians and Rila). The genetic diversity of the populations was highest in the southeastern European group and stepwise decreased westwards. Interestingly, the populations from Bulgaria and Romania were almost identical; therefore, we assume that they were not separated by the Danube Valley, at least during the last ice age. On the contrary, the differentiation among the three western Alps populations was considerable. For all these reasons, we assume that (i) the most important refugial area for the coniferous mountain forest biome in Europe has been located in southeastern Europe including at least parts of the Carpathians and the Bulgarian mountains; (ii) important refugial areas for this biome existed at the southeastern edge of the Alps; (iii) fragments of this habitat types survived along the southwestern Alps, but in a more scattered distribution; and (iv) relatively small relicts have persisted somewhere at the foothills of the Pyrenees.

Making Rainforests Relevant.

ERIC Educational Resources Information Center

Lustbader, Sara

1995-01-01

Describes a program for teaching about tropical rainforests in a concrete way using what's outside the door. This activity uses an eastern deciduous hardwood forest as an example. Step-by-step instructions include introductory activities, plus descriptions of stations in the forest to be visited. Resources include books, audio-visual materials,…

The economic value of the climate regulation ecosystem service provided by the Amazon rainforest

NASA Astrophysics Data System (ADS)

Heil Costa, Marcos; Pires, Gabrielle; Fontes, Vitor; Brumatti, Livia

2017-04-01

The rainy Amazon climate allowed important activities to develop in the region as large rainfed agricultural lands and hydropower plants. The Amazon rainforest is an important source of moisture to the regional atmosphere and helps regulate the local climate. The replacement of forest by agricultural lands decreases the flux of water vapor into the atmosphere and changes the precipitation patterns, which may severely affect such economic activities. Assign an economic value to this ecosystem service may emphasize the significance to preserve the Amazon rainforest. In this work, we provide a first approximation of the quantification of the climate regulation ecosystem service provided by the Amazon rainforest using the marginal production method. We use climate scenarios derived from Amazon deforestation scenarios as input to crop and runoff models to assess how land use change would affect agriculture and hydropower generation. The effects of forest removal on soybean production and on cattle beef production can both be as high as US 16 per year per ha deforested, and the effects on hydropower generation can be as high as US 8 per year per ha deforested. We consider this as a conservative estimate of a permanent service provided by the rainforest. Policy makers and other Amazon agriculture and energy businesses must be aware of these numbers, and consider them while planning their activities.

Terrestrial Water Flux Responses to Global Warming in Tropical Rainforest Area

NASA Astrophysics Data System (ADS)

Lan, C. W.; Lo, M. H.; Kumar, S.

2016-12-01

Precipitation extremes are expected to become more frequent in the changing global climate, which may considerably affect the terrestrial hydrological cycle. In this study, Coupled Model Intercomparison Project Phase 5 (CMIP5) archives have been examined to explore the changes in normalized terrestrial water fluxes (TWFn) (precipitation minus evapotranspiration minus total runoff, divided by the precipitation climatology) in three tropical rainforest areas: Maritime Continent, Congo, and Amazon. Results reveal that a higher frequency of intense precipitation events is predicted for the Maritime Continent in the future climate than in the present climate, but not for the Amazon or Congo rainforests. Nonlinear responses to extreme precipitation lead to a reduced groundwater recharge and a proportionately greater amount of direct runoff, particularly for the Maritime Continent, where both the amount and intensity of precipitation increase under global warming. We suggest that the nonlinear response is related to the existence of a higher near-surface soil moisture over the Maritime Continent than that over the Amazon and Congo rainforests. The wetter soil over the Maritime Continent also leads to an increased subsurface runoff. Thus, increased precipitation extremes and concomitantly reduced terrestrial water fluxes (TWF) lead to an intensified hydrological cycle for the Maritime Continent. This has the potential to result in a strong temporal heterogeneity in soil water distribution affecting the ecosystem of the rainforest region and increasing the risk of flooding and/or landslides.

Leaf and whole-tree water use relations of Australian rainforest species

NASA Astrophysics Data System (ADS)

Ishida, Yoko; Laurance, Susan; Liddell, Michael; Lloyd, Jonathan

2015-04-01

Climate change induces drought events and may therefore cause significant impact on tropical rainforests, where most plants are reliant on high water availability - potentially affecting the distribution, composition and abundance of plant species. Using an experimental approach, we are studying the effects of a simulated drought on lowland rainforest plants at the Daintree Rainforest Observatory (DRO), in tropical northern Australia. Before to build up the rainout infrastructure, we installed sap flow meters (HRM) on 62 rainforest trees. Eight tree species were selected with diverse ecological strategies including wood density values ranging from 0.34 to 0.88 g/cm3 and could be replicated within a 1ha plot: Alstonia scholaris (Apocynaceae), Argyrondendron peralatum (Malvaceae), Elaeocarpus angustifolius (Elaeocarpaceae), Endiandra microneura (Lauraceae), Myristica globosa (Myristicaceae), Syzygium graveolens (Myrtaceae), Normanbya normanbyi (Arecaceae), and Castanospermum australe (Fabaceae). Our preliminary results from sap flow data obtained from October 2013 to December of 2014 showed differences in the amount of water used by our trees varied in response to species, size and climate. For example Syzygium graveolens has used a maximum of 60 litres/day while Argyrondendrum peralatum used 13 litres/day. Other potential causes for differential water-use between species and the implications of our research will be discussed. We will continue to monitor sap flow during the rainfall exclusion (2014 to 2016) to determine the effects of plant physiological traits on water use strategies.

Terrestrial water flux responses to global warming in tropical rainforest areas

NASA Astrophysics Data System (ADS)

Lan, Chia-Wei; Lo, Min-Hui; Chou, Chia; Kumar, Sanjiv

2016-05-01

Precipitation extremes are expected to become more frequent in the changing global climate, which may considerably affect the terrestrial hydrological cycle. In this study, Coupled Model Intercomparison Project Phase 5 archives have been examined to explore the changes in normalized terrestrial water fluxes (precipitation minus evapotranspiration minus total runoff, divided by the precipitation climatology) in three tropical rainforest areas: Maritime Continent, Congo, and Amazon. Results show that a higher frequency of intense precipitation events is predicted for the Maritime Continent in the future climate than in the present climate, but not for the Amazon or Congo rainforests. Nonlinear responses to extreme precipitation lead to a reduced groundwater recharge and a proportionately greater amount of direct runoff, particularly for the Maritime Continent, where both the amount and intensity of precipitation increase under global warming. We suggest that the nonlinear response is related to the existence of a higher near-surface soil moisture over the Maritime Continent than that over the Amazon and Congo rainforests. The wetter soil over the Maritime Continent also leads to an increased subsurface runoff. Thus, increased precipitation extremes and concomitantly reduced terrestrial water fluxes lead to an intensified hydrological cycle for the Maritime Continent. This has the potential to result in a strong temporal heterogeneity in soil water distribution affecting the ecosystem of the rainforest region and increasing the risk of flooding and/or landslides.

Population structure and demographic history of a tropical lowland rainforest tree species Shorea parvifolia (Dipterocarpaceae) from Southeastern Asia.

PubMed

Iwanaga, Hiroko; Teshima, Kosuke M; Khatab, Ismael A; Inomata, Nobuyuki; Finkeldey, Reiner; Siregar, Iskandar Z; Siregar, Ulfah J; Szmidt, Alfred E

2012-07-01

Distribution of tropical rainforests in Southeastern Asia has changed over geo-logical time scale, due to movement of tectonic plates and/or global climatic changes. Shorea parvifolia is one of the most common tropical lowland rainforest tree species in Southeastern Asia. To infer population structure and demographic history of S. parvifolia, as indicators of temporal changes in the distribution and extent of tropical rainforest in this region, we studied levels and patterns of nucleotide polymorphism in the following five nuclear gene regions: GapC, GBSSI, PgiC, SBE2, and SODH. Seven populations from peninsular Malaysia, Sumatra, and eastern Borneo were included in the analyses. STRUCTURE analysis revealed that the investigated populations are divided into two groups: Sumatra-Malay and Borneo. Furthermore, each group contained one admixed population. Under isolation with migration model, divergence of the two groups was estimated to occur between late Pliocene (2.6 MYA) and middle Pleistocene (0.7 MYA). The log-likelihood ratio tests of several demographic models strongly supported model with population expansion and low level of migration after divergence of the Sumatra-Malay and Borneo groups. The inferred demographic history of S. parvifolia suggested the presence of a scarcely forested land bridge on the Sunda Shelf during glacial periods in the Pleistocene and predominance of tropical lowland rainforest at least in Sumatra and eastern Borneo.

ATLANTIC RAIN FOREST AND CAATINGA VEGETATION DYNAMICS EXPLAIN PHYLOGEOGRAPHICAL PATTERN OF AN ENDEMIC BRAZILIAN PALM

USDA-ARS?s Scientific Manuscript database

Technical Abstract Occurrence of a wetter and cooler climate associated with humid vegetation had been inferred for the Caatinga region during the late Pleistocene and early Holocene. The existence of rainforest migration routes in northeastern Brazil is widely recognized. Present-day rainforest nat...

Tropical Rainforest Education. ERIC Digest.

ERIC Educational Resources Information Center

Rillero, Peter

This digest provides four guideposts for tropical rainforest education: (1) structure; (2) location and climate; (3) importance; and (4) conservation of resources. Research is cited and background information provided about the layers of life and the adaptations of life within the tropical rain forest. Aspects of life within and near rain forests…

Road-edge effects on herpetofauna in a lowland Amazonian rainforest

Treesearch

Ross J. Maynard; Nathalie C. Aall; Daniel Saenz; Paul S. Hamilton; Matthew A. Kwiatkowski

2016-01-01

The impact of roads on the flora and fauna of Neotropical rainforest is perhaps the single biggest driver of habitat modification and population declines in these ecosystems. We investigated the road-edge effect of a low-use dirt road on amphibian and reptile abundance, diversity, and...

Elevational Distribution of Flightless Ground Beetles in the Tropical Rainforests of North-Eastern Australia.

PubMed

Staunton, Kyran M; Nakamura, Akihiro; Burwell, Chris J; Robson, Simon K A; Williams, Stephen E

2016-01-01

Understanding how the environment influences patterns of diversity is vital for effective conservation management, especially in a changing global climate. While assemblage structure and species richness patterns are often correlated with current environmental factors, historical influences may also be considerable, especially for taxa with poor dispersal abilities. Mountain-top regions throughout tropical rainforests can act as important refugia for taxa characterised by low dispersal capacities such as flightless ground beetles (Carabidae), an ecologically significant predatory group. We surveyed flightless ground beetles along elevational gradients in five different subregions within the Australian Wet Tropics World Heritage Area to investigate (1) whether the diversity and composition of flightless ground beetles are elevationally stratified, and, if so, (2) what environmental factors (other than elevation per se) are associated with these patterns. Generalised linear models and model averaging techniques were used to relate patterns of diversity to environmental factors. Unlike most taxonomic groups, flightless ground beetles increased in species richness and abundance with elevation. Additionally, each subregion consisted of relatively distinct assemblages containing a high level of regional endemic species. Species richness was most strongly and positively associated with historical and current climatic stabilities and negatively associated with severity of recent disturbance (treefalls). Assemblage composition was associated with latitude and historical and current climatic conditions. Although the results need to be interpreted carefully due to inter-correlation between historical and current climatic variables, our study is in agreement with the hypothesis that upland refugia provided stable climatic conditions since the last glacial maximum, and supported a diverse fauna of flightless beetle species. These findings are important for conservation management as upland habitats become increasingly threatened by climate change.

Elevational Distribution of Flightless Ground Beetles in the Tropical Rainforests of North-Eastern Australia

PubMed Central

Staunton, Kyran M.; Nakamura, Akihiro; Burwell, Chris J.; Robson, Simon K. A.; Williams, Stephen E.

2016-01-01

Understanding how the environment influences patterns of diversity is vital for effective conservation management, especially in a changing global climate. While assemblage structure and species richness patterns are often correlated with current environmental factors, historical influences may also be considerable, especially for taxa with poor dispersal abilities. Mountain-top regions throughout tropical rainforests can act as important refugia for taxa characterised by low dispersal capacities such as flightless ground beetles (Carabidae), an ecologically significant predatory group. We surveyed flightless ground beetles along elevational gradients in five different subregions within the Australian Wet Tropics World Heritage Area to investigate (1) whether the diversity and composition of flightless ground beetles are elevationally stratified, and, if so, (2) what environmental factors (other than elevation per se) are associated with these patterns. Generalised linear models and model averaging techniques were used to relate patterns of diversity to environmental factors. Unlike most taxonomic groups, flightless ground beetles increased in species richness and abundance with elevation. Additionally, each subregion consisted of relatively distinct assemblages containing a high level of regional endemic species. Species richness was most strongly and positively associated with historical and current climatic stabilities and negatively associated with severity of recent disturbance (treefalls). Assemblage composition was associated with latitude and historical and current climatic conditions. Although the results need to be interpreted carefully due to inter-correlation between historical and current climatic variables, our study is in agreement with the hypothesis that upland refugia provided stable climatic conditions since the last glacial maximum, and supported a diverse fauna of flightless beetle species. These findings are important for conservation management as upland habitats become increasingly threatened by climate change. PMID:27192085

Further comments on oral transmission of Chagas' disease in Brazil: epidemiology, geographical distribution and viability of the infective parasite.

PubMed

Benchimol-Barbosa, Paulo R

2010-05-28

In 2006, Brazilian government received the international certificate of interruption of the vectorial transmission of Chagas' disease. However, outbreaks reported in Brazilian Amazon rainforest bear a regular occurrence and represents a relevant regional epidemiological gauge. The wild life cycle of the Chagas' disease transmission (i.e., triatomine-marsupial cycle) is present outside the previously reported endemic belt, ubiquitously, as infective triatomines can be demonstrated in Palm trees widespread all over the Amazon rainforest. As humans invade the rainforest, one is incidentally caught up and further becomes' an active part of American trypanosomiasis wild life cycle. Copyright 2008 Elsevier Ireland Ltd. All rights reserved.

Ecological correlates of flying squirrel microhabitat use and density in temperate rainforests of southeastern Alaska

Treesearch

Winston P. Smith; Scott M. Gende; Jeffrey V. Nichols

2004-01-01

We studied habitat relations of the Prince of Wales flying squirrel (Glaucomys sabrinus griseifrons), an endemic of the temperate, coniferous rainforest of southeastern Alaska, because of concerns over population viability from extensive clear-cut logging in the region. We used stepwise logistic regression to examine relationships between...

A new genus of predatory katydids (Orthoptera: Tettigoniidae: Listroscelidinae) from the Amazonian Rainforest.

PubMed

Mendes, Diego Matheus De Mello; Chamorro-Rengifo, Juliana; Rafael, José Albertino

2016-09-12

Most of the predatory katydids Listroscelidini species known were described from the Brazilian Atlantic Forest. Here a new genus and species from the Amazonian Rainforest is described. Based on its morphological characteristics, this new genus represents an intermediate form between two closely related genera, Listroscelis Serville and Monocerophora Walker.

Using Simulations To Improve Cognitive Reasoning.

ERIC Educational Resources Information Center

McGee, Steven; Corriss, Darlene; Shia, Regina

This study investigated changes in students' cognitive reasoning as they analyzed the dynamics of a rainforest ecosystem (El Yunque) in the aftermath of a hurricane in Puerto Rico. Students explore the virtual rainforest to study what happened to a type of frog after the hurricane. The culminating event is a simulation in which students manipulate…

Rainforest: Reptiles and Amphibians

ERIC Educational Resources Information Center

Olson, Susanna

2006-01-01

Rainforest reptiles and amphibians are a vibrantly colored, multimedia art experience. To complete the entire project one may need to dedicate many class periods to production, yet in each aspect of the project a new and important skill, concept, or element is being taught or reinforced. This project incorporates the study of warm and cool color…

What Have You Got To Lose? New World Tropical Rainforests. Grades 3-8.

ERIC Educational Resources Information Center

Murphey, Carol E.

In this unit, designed for use with grades three through eight, students explore the biology and peoples of Latin American rainforests and the problems caused by the interactions of people with this environment. The featured activities integrate art, science, language, and social studies. Fourteen lessons, arranged in sequential order, comprise…

To Tip or Not to Tip: The Case of the Congo Basin Rainforest Realm

NASA Astrophysics Data System (ADS)

Pietsch, S.; Bednar, J. E.; Fath, B. D.; Winter, P. A.

2017-12-01

The future response of the Congo basin rainforest, the second largest tropical carbon reservoir, to climate change is still under debate. Different Climate projections exist stating increase and decrease in rainfall and different changes in rainfall patterns. Within this study we assess all options of climate change possibilities to define the climatic thresholds of Congo basin rainforest stability and assess the limiting conditions for rainforest persistence. We use field data from 199 research plots from the Western Congo basin to calibrate and validate a complex BioGeoChemistry model (BGC-MAN) and assess model performance against an array of possible future climates. Next, we analyze the reasons for the occurrence of tipping points, their spatial and temporal probability of occurrence, will present effects of hysteresis and derive probabilistic spatial-temporal resilience landscapes for the region. Additionally, we will analyze attractors of forest growth dynamics and assess common linear measures for early warning signals of sudden shifts in system dynamics for their robustness in the context of the Congo Basin case, and introduce the correlation integral as a nonlinear measure of risk assessment.

Assessing self-organization of plant communities--A thermodynamic approach

NASA Astrophysics Data System (ADS)

Lin, H.; Cao, M.; Stoy, P.; Zhang, Y.

2013-12-01

Thermodynamics is a powerful tool for the study of system development and has the potential to be applied to studies of ecological complexity. Here, we develop a set of thermodynamic indicators including energy capture and energy dissipation to quantify plant community self-organization. The study ecosystems included a tropical seasonal rainforest, an artificial tropical rainforest, a rubber plantation, and two Chromolaena odorata (L.) R.M. King & H. Robinson communities aged 13 years and 1 year. The communities represent a complexity transect from primary vegetation, to transitional community, economic plantation, and fallows and are typical for Xishuangbanna, southwestern China. The indicators of ecosystem self-organization are sensitive to plant community type and seasonality, and demonstrate that the tropical seasonal rainforest is highly self-organized and plays an important role in local environmental stability via the land surface thermal regulation. The rubber plantation is at a very low level of self-organization as quantified by the thermodynamic indicators, especially during the dry season. The expansion of the area of rubber plantation and shrinkage of tropical seasonal rainforest would likely induce local surface warming and a larger daily temperature range.

Litter mercury deposition in the Amazonian rainforest.

PubMed

Fostier, Anne Hélène; Melendez-Perez, José Javier; Richter, Larissa

2015-11-01

The objective of this work was to assess the flux of atmospheric mercury transferred to the soil of the Amazonian rainforest by litterfall. Calculations were based on a large survey of published and unpublished data on litterfall and Hg concentrations in litterfall samples from the Amazonian region. Litterfall based on 65 sites located in the Amazon rainforest averaged 8.15 ± 2.25 Mg ha(-1) y(-1). Average Hg concentrations were calculated from nine datasets for fresh tree leaves and ten datasets for litter, and a median concentration of 60.5 ng Hg g(-1) was considered for Hg deposition in litterfall, which averaged 49 ± 14 μg m(-2) yr(-1). This value was used to estimate that in the Amazonian rainforest, litterfall would be responsible for the annual removing of 268 ± 77 Mg of Hg, approximately 8% of the total atmospheric Hg deposition to land. The impact of the Amazon deforestation on the Hg biogeochemical cycle is also discussed. Copyright © 2015 Elsevier Ltd. All rights reserved.

Simulating tropical carbon stocks and fluxes in a changing world using an individual-based forest model.

NASA Astrophysics Data System (ADS)

Fischer, Rico; Huth, Andreas

2014-05-01

Large areas of tropical forests are disturbed due to climate change and human influence. Experts estimate that the last remaining rainforests could be destroyed in less than 100 years with strong consequences for both developing and industrial countries. Using a modelling approach we analyse how disturbances modify carbon stocks and carbon fluxes of African rainforests. In this study we use the process-based, individual-oriented forest model FORMIND. The main processes of this model are tree growth, mortality, regeneration and competition. The study regions are tropical rainforests in the Kilimanjaro region and Madagascar. Modelling above and below ground carbon stocks, we analyze the impact of disturbances and climate change on forest dynamics and forest carbon stocks. Droughts and fire events change the structure of tropical rainforests. Human influence like logging intensify this effect. With the presented results we could establish new allometric relationships between forest variables and above ground carbon stocks in tropical regions. Using remote sensing techniques, these relationships would offer the possibility for a global monitoring of the above ground carbon stored in the vegetation.

Identification and dynamics of a cryptic suture zone in tropical rainforest

PubMed Central

Moritz, C.; Hoskin, C.J.; MacKenzie, J.B.; Phillips, B.L.; Tonione, M.; Silva, N.; VanDerWal, J.; Williams, S.E.; Graham, C.H.

2009-01-01

Suture zones, shared regions of secondary contact between long-isolated lineages, are natural laboratories for studying divergence and speciation. For tropical rainforest, the existence of suture zones and their significance for speciation has been controversial. Using comparative phylogeographic evidence, we locate a morphologically cryptic suture zone in the Australian Wet Tropics rainforest. Fourteen out of 18 contacts involve morphologically cryptic phylogeographic lineages, with mtDNA sequence divergences ranging from 2 to 15 per cent. Contact zones are significantly clustered in a suture zone located between two major Quaternary refugia. Within this area, there is a trend for secondary contacts to occur in regions with low environmental suitability relative to both adjacent refugia and, by inference, the parental lineages. The extent and form of reproductive isolation among interacting lineages varies across species, ranging from random admixture to speciation, in one case via reinforcement. Comparative phylogeographic studies, combined with environmental analysis at a fine-scale and across varying climates, can generate new insights into suture zone formation and to diversification processes in species-rich tropical rainforests. As arenas for evolutionary experimentation, suture zones merit special attention for conservation. PMID:19203915

Diversity and Distribution of Braconidae, a Family of Parasitoid Wasps in the Central European Peatbogs of South Bohemia, Czech Republic

PubMed Central

Lozan, Aurel I.; Belokobylskij, Sergey; Achterberg, Cees van Van; Monaghan, Michael T.

2010-01-01

An ecological overview of seven years investigation of Braconidae, a family of parasitoid wasps (Hymenoptera: Ichneumonoidea) and a tyrpho-classification of parasitoids in peatbog areas of South Bohemia, Czech Republic are given. A total of 350 species were recorded in investigated sites, but only five tyrphobionts (1.4%) are proposed: Microchelonus basalis, Microchelonus koponeni, Coloneura ate, Coloneura danica and Myiocephalus niger. All of these species have a boreal-alpine distribution that, in Central Europe, is associated only with peatbogs. Tyrphophilous behaviour is seen in at least four (1.1%) species: Microchelonus pedator, Microchelonus subpedator, Microchelonus karadagi and Microchelonus gravenhorstii; however, a number of other braconids prefer peatbogs because they were more frequently encountered within, rather than outside, the bog habitat. The rest of the braconids (342 species, 97.5%) are tyrphoneutrals, many of them being eurytopic components of various habitats throughout their current ranges. Lists of tyrphobiontic braconids and a brief commentary on species composition, distributional picture of actual ranges, and parasitoid association to bog landscape are provided. Being true refugial habitats for populations in an ever-changing world, peatbogs play a significant role in harboring insect communities. PMID:20578880

Landscape Variation in Plant Defense Syndromes across a Tropical Rainforest

NASA Astrophysics Data System (ADS)

McManus, K. M.; Asner, G. P.; Martin, R.; Field, C. B.

2014-12-01

Plant defenses against herbivores shape tropical rainforest biodiversity, yet community- and landscape-scale patterns of plant defense and the phylogenetic and environmental factors that may shape them are poorly known. We measured foliar defense, growth, and longevity traits for 345 canopy trees across 84 species in a tropical rainforest and examined whether patterns of trait co-variation indicated the existence of plant defense syndromes. Using a DNA-barcode phylogeny and remote sensing and land-use data, we investigated how phylogeny and topo-edaphic properties influenced the distribution of syndromes. We found evidence for three distinct defense syndromes, characterized by rapid growth, growth compensated by defense, or limited palatability/low nutrition. Phylogenetic signal was generally lower for defense traits than traits related to growth or longevity. Individual defense syndromes were organized at different taxonomic levels and responded to different spatial-environmental gradients. The results suggest that a diverse set of tropical canopy trees converge on a limited number of strategies to secure resources and mitigate fitness losses due to herbivory, with patterns of distribution mediated by evolutionary histories and local habitat associations. Plant defense syndromes are multidimensional plant strategies, and thus are a useful means of discerning ecologically-relevant variation in highly diverse tropical rainforest communities. Scaling this approach to the landscape level, if plant defense syndromes can be distinguished in remotely-sensed data, they may yield new insights into the role of plant defense in structuring diverse tropical rainforest communities.

Effects of avian mobbing on roost use and diet of powerful owls, Ninox strenua

PubMed

Pavey; Smyth

1998-02-01

We observed the species and numbers of mobbing birds and their effects on a large, nocturnal, bird-eating predator, the powerful owl, together with the pattern of owl predation on mobbing and non-mobbing species. Owls were mobbed on 35 occasions by seven of 44 species of forest birds at a site composed of open forest (88% by area) and rainforest (12%). The majority of bouts involved individuals of a single species, although mixed groups were observed on nine occasions. Regular mobbers were between 4 and 26% of the owls' body weight. Owls abandoned their daytime roosts during 20% of bouts and responded by calling or actively monitoring mobbers during 54% of bouts. Mobbing appeared to explain why owls roosted in rainforest significantly more often than expected by its availability, mobbing being significantly less frequent in rainforest than in open forest. Only one mobbing species regularly occupied rainforest and the canopy of roosts in rainforest was denser than that in open forest, thus reducing the chances of an owl being detected by potential mobbers. Twelve species of forest birds were within the range of prey size of the powerful owl (75-800 g): six were mobbers and six non-mobbers. The frequency of owl predation on non-mobbers was 8.75 times that on mobbers. The species in this study took a high risk by mobbing a very large predator, but benefited by greatly reducing their chances of predation.Copyright 1998 The Association for the Study of Animal Behaviour.

Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens).

PubMed

Zhen, Ying; Harrigan, Ryan J; Ruegg, Kristen C; Anderson, Eric C; Ng, Thomas C; Lao, Sirena; Lohmueller, Kirk E; Smith, Thomas B

2017-10-01

The little greenbul, a common rainforest passerine from sub-Saharan Africa, has been the subject of long-term evolutionary studies to understand the mechanisms leading to rainforest speciation. Previous research found morphological and behavioural divergence across rainforest-savannah transition zones (ecotones), and a pattern of divergence with gene flow suggesting divergent natural selection has contributed to adaptive divergence and ecotones could be important areas for rainforests speciation. Recent advances in genomics and environmental modelling make it possible to examine patterns of genetic divergence in a more comprehensive fashion. To assess the extent to which natural selection may drive patterns of differentiation, here we investigate patterns of genomic differentiation among populations across environmental gradients and regions. We find compelling evidence that individuals form discrete genetic clusters corresponding to distinctive environmental characteristics and habitat types. Pairwise F ST between populations in different habitats is significantly higher than within habitats, and this differentiation is greater than what is expected from geographic distance alone. Moreover, we identified 140 SNPs that showed extreme differentiation among populations through a genomewide selection scan. These outliers were significantly enriched in exonic and coding regions, suggesting their functional importance. Environmental association analysis of SNP variation indicates that several environmental variables, including temperature and elevation, play important roles in driving the pattern of genomic diversification. Results lend important new genomic evidence for environmental gradients being important in population differentiation. © 2017 John Wiley & Sons Ltd.

Interannual and seasonal variability of water use efficiency in a tropical rainforest: Results from a 9 year eddy flux time series

NASA Astrophysics Data System (ADS)

Tan, Zheng-Hong; Zhang, Yi-Ping; Deng, Xiao-Bao; Song, Qing-Hai; Liu, Wen-Jie; Deng, Yun; Tang, Jian-Wei; Liao, Zhi-Yong; Zhao, Jun-Fu; Song, Liang; Yang, Lian-Yan

2015-01-01

used a continuous 9 year (2003-2011) eddy flux time series with 30 min resolution to examine water use efficiency in a tropical rainforest and determine its environmental controls. The multiyear mean water use efficiency (Wue) of this rainforest was 3.16 ± 0.33 gC per kg H2O, which is close to that of boreal forests, but higher than subtropical forests, and lower than temperate forests. The water vapor deficit (VPD) had a strong impact on instantaneous Wue, in the manner predicted by stomatal optimization theory. At the seasonal scale, temperature was the dominant controller of Wue. The negative correlation between temperature and Wue was probably caused by high continuous photosynthesis during low-temperature periods. The VPD did not correlate with Wue at the interannual scale. No interannual trend was detected in Wue or inherent water use efficiency (Wei), either annually or seasonally. The fact that no increasing trend of Wei was found in the studied tropical rainforest, along with other evidence of CO2 stimulation in tropical rainforests, requires special attention and data validation. There was no significant difference between Wue during a drought and the 9 year mean values in the forest we studied, but we found that dry season transpiration (Tr) was consistently lower during the drought compared to the mean values. Finally, whether Wue increases or decreases during a drought is determined by the drought sensitivity of gross primary production (GPP).

N2-fixing legumes are linked to enhanced mineral dissolution and microbiome modulations in Neotropical rainforests

NASA Astrophysics Data System (ADS)

Epihov, Dimitar; Batterman, Sarah; Hedin, Lars; Saltonstall, Kristin; Hall, Jefferson; Leake, Jonathan; Beerling, David

2017-04-01

Legumes represent the dominant family of many tropical forests with estimates of 120 billion legume trees in the Amazon basin alone. Many rainforest legume trees form symbioses with N2-fixing bacteria. In the process of atmospheric N2-fixation large amounts of nitrogen-rich litter are generated, supplying half of all nitrogen required to support secondary rainforest succession. However, it is unclear how N2-fixers affect the biogeochemical cycling of other essential nutrients by affecting the rates of mineral dissolution and rock weathering. Here we show that N2-fixing legumes in young Panamanian rainforests promote acidification and enhance silicate rock weathering by a factor of 2 compared to non-fixing trees. We report that N2-fixers also associate with enhanced dissolution of Al- and Fe-bearing secondary minerals native to tropical oxisols. In legume-rich neighbourhoods, non-fixers benefited from raised weathering rates relative to those of legume-free zones thus suggesting a positive community effect driven by N2-fixers. These changes in weathering potential were tracked by parallel functional and structural changes in the soil and rock microbiomes. Our findings support the view that N2-fixing legumes are central components of biogeochemical cycling, associated with enhanced release of Fe- and Al-bound P and primary mineral products (Mg, Mo). Rainforest legume services therefore bear important implications to short-term C cycling related to forest growth and the long-term C cycle related to marine carbonate deposition fuelled by silicate weathering.

Early recovery of a Hawaiian lowland rainforest following clearcutting at Kalapana on the Island of Hawaii

DOE Office of Scientific and Technical Information (OSTI.GOV)

Grossman, D.H.

The recovery of lowland rainforest vegetation on the Island of Hawaii was evaluated 2 years after clearcutting. Rainforest quality was assessed with regeneration success associated with the environmental changes. Sixty-three percent of the 57 vascular species in the forest were native to the Hawaiian rainforest. Phanerophytes were the most important life form. The presence of Psidium cattleianum and other alien species demonstrated disturbances had occurred in selected areas prior to the clearcutting. Two years after clearcutting (1987), only 24% of the 101 species coming into the clearcut area were native. The shrubs, micro- and nano-phanerophyte, were the dominant life forms,more » represented by Pipturus albidus, a native rainforest shrub or tree, and four non-native shrub species. Metrosideros polymorpha, the dominant tree in the native forest, was successfully regenerating from seed across the clear-cut area. The forest seedbank analysis also demonstrated that Metrosideros, along with the seeds of important exotic species colonizing the clearcut area were presented in the forest soils. The forest and clearcut species had a high rate of correlation with the elevation gradient. The underlying lava flows strong influenced past and present vegetation associations. In the clearcut area, the degree of compaction and distance from the forest were critical factors determining the composition of recovering vegetation. The microclimate variables of soils, significantly altered due to the effects of clearcutting, and competition from weeds probably lead to poor germination and growth of native rainforest species. This native forest is not pristine, but unique in stature, in complex of cohort stands, and in position on the landscape. It is extremely prone to species composition shift following perturbation, due to the presence of the weed seedbank in the forest seedbank as demonstrated in the dominance of these species across the clearcut area.« less

Available nitrogen is the key factor influencing soil microbial functional gene diversity in tropical rainforest.

PubMed

Cong, Jing; Liu, Xueduan; Lu, Hui; Xu, Han; Li, Yide; Deng, Ye; Li, Diqiang; Zhang, Yuguang

2015-08-20

Tropical rainforests cover over 50% of all known plant and animal species and provide a variety of key resources and ecosystem services to humans, largely mediated by metabolic activities of soil microbial communities. A deep analysis of soil microbial communities and their roles in ecological processes would improve our understanding on biogeochemical elemental cycles. However, soil microbial functional gene diversity in tropical rainforests and causative factors remain unclear. GeoChip, contained almost all of the key functional genes related to biogeochemical cycles, could be used as a specific and sensitive tool for studying microbial gene diversity and metabolic potential. In this study, soil microbial functional gene diversity in tropical rainforest was analyzed by using GeoChip technology. Gene categories detected in the tropical rainforest soils were related to different biogeochemical processes, such as carbon (C), nitrogen (N) and phosphorus (P) cycling. The relative abundance of genes related to C and P cycling detected mostly derived from the cultured bacteria. C degradation gene categories for substrates ranging from labile C to recalcitrant C were all detected, and gene abundances involved in many recalcitrant C degradation gene categories were significantly (P < 0.05) different among three sampling sites. The relative abundance of genes related to N cycling detected was significantly (P < 0.05) different, mostly derived from the uncultured bacteria. The gene categories related to ammonification had a high relative abundance. Both canonical correspondence analysis and multivariate regression tree analysis showed that soil available N was the most correlated with soil microbial functional gene structure. Overall high microbial functional gene diversity and different soil microbial metabolic potential for different biogeochemical processes were considered to exist in tropical rainforest. Soil available N could be the key factor in shaping the soil microbial functional gene structure and metabolic potential.

Microbial drivers of spatial heterogeneity of nitrous oxide pulse dynamics following drought in an experimental tropical rainforest

NASA Astrophysics Data System (ADS)

Young, J. C.; Sengupta, A.; U'Ren, J.; Van Haren, J. L. M.; Meredith, L. K.

2017-12-01

Nitrous oxide (N2O) is a long-lived, potent greenhouse gas with increasing atmospheric concentrations. Soil microbes in agricultural and natural ecosystems are the dominant source of N2O, which involves complex interactions between N-cycling microbes, metabolisms, soil properties, and plants. Tropical rainforests are the largest natural source of N2O, however the microbial and environmental drivers are poorly understood as few studies have been performed in these environments. Thus, there is an urgent need for further research to fill in knowledge gaps regarding tropical N-cycling, and the response of soil microbial communities to changes in precipitation patterns, temperature, nitrogen deposition, and land use. To address this data gap, we performed a whole-forest drought in the tropical rainforest biome in Biosphere 2 (B2) and analyzed connections between soil microbes, forest heterogeneity, and N2O emissions. The B2 rainforest is the hottest tropical rainforest on Earth, and is an important model system for studying the response of tropical forests to warming with controlled experimentation. In this study, we measured microbial community abundance and diversity profiles (16S rRNA and ITS2 amplicon sequencing) along with their association with soil properties (e.g. pH, C, N) during the drought and rewetting at five locations (3 depths), including regions that have been previously characterized with high and low N2O drought pulse dynamics (van Haren et al., 2005). In this study, we present the spatial distribution of soil microbial communities within the rainforest at Biosphere 2 and their correlations with edaphic factors. In particular, we focus on microbial, soil, and plant factors that drive high and low N2O pulse zones. As in the past, we found that N2O emissions were highest in response to rewetting in a zone hypothesized to be rich in nutrients from a nearby sugar palm. We will characterize microbial indicator species and nitrogen cycling genes to better resolve N cycling across the forest. Understanding how N2O formation is mediated by soil microbes in response to drought in tropical rainforests is challenging given the great diversity of microbial communities and metabolisms involved, but is critical for understanding the source of global increases in atmospheric N2O.

Regional Impacts of Climate Change on the Amazon Rainforest: 2080-2100

NASA Astrophysics Data System (ADS)

Cook, K. H.; Vizy, E. K.

2006-12-01

A regional climate model with resolution of 60 km is coupled with a potential vegetation model to simulate future climate over South America. The following steps are taken to effectively communicate the results across disciplines and to make them useful to the policy and impacts communities: the simulation is aimed at a particular time period (2081-2100), the climate change results are translated into changes in vegetation distribution, and the results are reported on regional space scales relative to political boundaries. In addition, the model validation in clearly presented to provide perspective on uncertainty for the prognosis. The model reproduces today's climate and vegetation over tropical and subtropical South America accurately. In simulations of the future, the model is forced by the IPCC's A2 scenario of future emissions, which assumes that CO2 emissions continue to grow at essentially today's rate throughout the 21st century, reaching 757 ppmv averaged over 2081-2100. The model is constrained on its lateral boundaries by atmospheric conditions simulated by a global climate model, applied as anomalies to present day conditions, and predicted changes in sea surface temperatures. The extent of the Amazon rainforest is reduced by about 70 per cent in the simulation, and the shrubland (caatinga) vegetation of Brazil's Nordeste region spreads westward and southward well into the continental interior. Bolivia, Paraguay, and Argentina lose all of their rainforest vegetation, and Brazil and Peru lose most of it. The surviving rain forest is concentrated near the equator. Columbia's rainforest survives largely intact and, along the northern coast, Venezuela and French Guiana suffer relatively small reductions. The loss in Guyana and Surinam is 30-50 per cent. Much of the rainforest in the central Amazon north of about 15S is replaced by savanna vegetation, but in southern Bolivia, northern Paraguay, and southern Brazil, grasslands take the place of the rainforest. Over a large portion of eastern Brazil, present day savanna is replaced by shrubland as the so-called caatinga vegetation of the Nordeste region spreads, and the present day caatinga vegetation is replaced by barren land. The simulated changes in vegetation are caused by changes in moisture, not temperature. Reductions in annual mean precipitation are widespread and rainfall becomes insufficient to support the rainforest in these regions, but some areas receive more precipitation. The length of the dry season increases in the central and southern Amazon in association with changes in the global-scale tropical Hadley circulation. Without this change in seasonality, local "refugia" of Amazon vegetation would be preserved and the retreat of the rainforest would be somewhat less extensive.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dubey, Manvendra; Parket, Harrison; Myers, Katherine

Forests soak up 25% of the carbon dioxide (CO2) emitted by anthropogenic fossil energy use (10 Gt C y-1), moderating its atmospheric accumulation. How this terrestrial CO2 uptake will evolve with climate change in the 21st Century is largely unknown. Rainforests are the most active ecosystems, with the Amazon basin storing 120 Gt C as biomass and exchanging 18 Gt C y-1 of CO2 via photosynthesis and respiration and fixing carbon at 2-3 kg C m-2 y-1. Furthermore, the intense hydrologic and carbon cycles are tightly coupled in the Amazon where about half of the water is recycled by evapotranspirationmore » and the other half imported from the ocean by Northeasterly trade winds. Climate models predict a drying in the Amazon with reduced carbon uptake while observationally guided assessments indicate sustained uptake. We set out to resolve this huge discrepancy in the size and sign of the future Amazon carbon cycle by performing the first simultaneous regional-scale high-frequency measurements of atmospheric CO2, H2O, HOD, CH4, N2O, and CO at the T3 site in Manacupuru, Brazil, as part of DOE's GoAmazon 2014/15 project. Our data will be used to inform and develop DOE's Community Land Model (CLM) on the tropical carbon-water couplings at the appropriate grid scale (10-50 km). Our measurements will also validate the CO2 data from Japan's Greenhouse gases Observing Satellite (GOSAT) and NASA's Orbiting Carbon Observatory (OCO)-2 satellite (launched in July, 2014). Our data addresses these science questions: 1. How does ecosystem heterogeneity and climate variability influence the rainforest carbon cycle? 2. How well do current tropical ecosystem models simulate the observed regional carbon cycle? 3. Does nitrogen deposition (from the Manaus, Brazil, plume) enhance rainforest carbon uptake?« less

Oxygen Isotopic Composition of Nitrate and Sulfate in Fog and River water in Podocarpus National Forest, Ecuador

NASA Astrophysics Data System (ADS)

Brothers, L. A.; Fabian, P.; Thiemens, M. H.

2006-12-01

The eastern slopes of the Andean rainforests of Ecuador possess some of the highest plant biodiversity found on the planet; however, these ecosystems are in jeopardy because region is experiences one of the highest deforestation rates in South America. This rainforest characterized by high acidity and low nutrient soils and experiences natural process which are both destabilizing and stabilizing to biodiversity rendering this a unique, though sensitive environment. There is increased concern that anthropogenic activities are affecting rainforests and could lead to higher extinction rates, changes in the biodiversity and far reaching effects on the global troposphere. Measurements of nitrate and sulfate in rain and fog water have shown periods of elevated concentrations in the Podocarpus National Park near Loja, Ecuador. These high episodes contribute to annual deposition rates that are comparable to polluted central Europe. Significant anthropogenic sources near this region are lacking and it is believed that the majority of the nitrate and sulfate pollution can be attributed to biomass burning in the Amazon basin. Concentration measurements do not elucidate the source of high nitrate and sulfate pollution; however, by measuring all three stable isotopes of oxygen in nitrate and sulfate from fog and river water provides a new way to examine the impacts of biomass burning on the region. By using stable isotope techniques atmospheric nitrate and sulfate can be resolved from terrestrial sources. This provides an unique way to trace the contributions from the biomass burning and farming sources. Current research at the field station monitors sulfate and nitrate concentrations in rain and fog water by standard methods to investigate water and nutrient pathways along with data from satellite and ground based remote sensing, in-situ observations and numerical models.

Oil road effects on the anuran community of a high canopy tank bromeliad (Aechmea zebrina) in the upper Amazon basin, Ecuador.

PubMed

McCracken, Shawn F; Forstner, Michael R J

2014-01-01

Tropical forest canopies are among the most species-rich terrestrial habitats on earth and one of the remaining relatively unexplored biotic frontiers. Epiphytic bromeliads provide microhabitat for a high diversity of organisms in tropical forest canopies and are considered a keystone resource. A number of amphibians inhabit these phytotelmata, yet their ecological role and status in forest canopies remains unknown. For this study, anurans were collected from an upper canopy tank bromeliad (Aechmea zebrina) at ∼20-45 m (x¯ = 33 m) above the forest floor. Bromeliads were sampled from trees located near trails in undisturbed primary rainforest and oil access roads in the Yasuní Biosphere Reserve of Amazonian Ecuador. We collected 95 anurans representing 10 species from 160 bromeliads in 32 trees. We used generalized linear mixed models to assess the effects of disturbance and habitat factors on the occupancy and abundance of anurans collected. Bromeliads in forest along oil roads had a lower occupancy and abundance of anurans than those in undisturbed forest, a somewhat unexpected result due to the intactness and quality of forest adjacent to the roads. Recorded habitat variables had no relationship with occupancy or abundance of anurans, and did not differ significantly between treatments. Our findings reveal that even the minimal footprint of natural resource extraction operations, primarily roads, in rainforest environments can have significant negative impacts on the unique upper canopy anuran community. Based on these results, we recommend that natural resource development treat rainforest habitat as an offshore system where roads are not used, employ industry best practice guidelines, and current access roads be protected from colonization and further deforestation.

Oil Road Effects on the Anuran Community of a High Canopy Tank Bromeliad (Aechmea zebrina) in the Upper Amazon Basin, Ecuador

PubMed Central

McCracken, Shawn F.; Forstner, Michael R. J.

2014-01-01

Tropical forest canopies are among the most species-rich terrestrial habitats on earth and one of the remaining relatively unexplored biotic frontiers. Epiphytic bromeliads provide microhabitat for a high diversity of organisms in tropical forest canopies and are considered a keystone resource. A number of amphibians inhabit these phytotelmata, yet their ecological role and status in forest canopies remains unknown. For this study, anurans were collected from an upper canopy tank bromeliad (Aechmea zebrina) at ∼20–45 m (x¯ = 33 m) above the forest floor. Bromeliads were sampled from trees located near trails in undisturbed primary rainforest and oil access roads in the Yasuní Biosphere Reserve of Amazonian Ecuador. We collected 95 anurans representing 10 species from 160 bromeliads in 32 trees. We used generalized linear mixed models to assess the effects of disturbance and habitat factors on the occupancy and abundance of anurans collected. Bromeliads in forest along oil roads had a lower occupancy and abundance of anurans than those in undisturbed forest, a somewhat unexpected result due to the intactness and quality of forest adjacent to the roads. Recorded habitat variables had no relationship with occupancy or abundance of anurans, and did not differ significantly between treatments. Our findings reveal that even the minimal footprint of natural resource extraction operations, primarily roads, in rainforest environments can have significant negative impacts on the unique upper canopy anuran community. Based on these results, we recommend that natural resource development treat rainforest habitat as an offshore system where roads are not used, employ industry best practice guidelines, and current access roads be protected from colonization and further deforestation. PMID:24416414

The role of savannas in the terrestrial Si cycle: A case-study from Lamto, Ivory Coast

NASA Astrophysics Data System (ADS)

Alexandre, Anne; Bouvet, Mickael; Abbadie, Luc

2011-08-01

Savannas currently occupy a fifth of the earth's land surface and are predicted to expand in the next few centuries at the expense of tropical forests, mainly as a result of deforestation and human fires. Can such a vegetation trend impact, through changes in plant Si cycling, the lithogenic silicon (LSi) release into soils (through chemical weathering) and the net dissolved Si (DSi) outputs from soils to stream water (through chemical denudation)? The first step of an investigation requires quantifying the net Si fluxes involved in the plant/soil system. Here, a schematic steady-state Si cycle, established for a tropical humid savanna (Lamto, Ivory Coast) that developed on a ferruginous soil and is subjected to annual fires, is presented. Erosion was assumed to be insignificant. LSi and biogenic Si (BSi under the form of phytoliths) pools were measured, and Si fluxes were estimated from Si concentrations and mass balance calculation. Identification of plant and soil phytoliths indicated that the soil BSi pool is in equilibrium with the current BSi input by the savanna. In the soil column, mixing between a young rapidly recycled BSi pool and an old stable BSi pool is attested by a mixing line equation. Storage of the old BSi pool is assimilated as a BSi output from the plant/soil system. A BSi output additionally occurs after annual fires, when ashes are exported. Both BSi outputs decrease as much the BSi dissolution. In order to uptake constant DSi flux, the savanna increases by three to eight times the net LSi release, depending upon the post-fire ash exportation scenario. A comparison between savanna and rainforest Si cycles that maximizes the differences in plant/soil systems and minimizes differences in climate is presented. The comparison revealed that BSi storage is higher in the savanna soil than in the rainforest soil, mainly due to BSi production that is twice higher in the savanna (127 vs 67 kg/ha/yr). The resulting LSi release that is enhanced by plant uptake is more than 1.5 higher in the savanna than in the rainforest (from 33 to 85 kg/ha/yr in the savanna vs 21 kg/ha/yr in the rainforest). On the contrary, DSi output from soils to stream water, which is not controlled by plant Si cycling but more likely by the soil hydrological regime (or meteoric weathering), is close to twice as high in the rainforest/ferrallitic soil ecosystem (16 vs 9 kg/ha/yr). This case study suggests that the predicted expansion of savannas at the expense of forests should significantly increase DSi uptake by plants, BSi storage in soils, BSi output with ash exportation, and, hence, LSi release through chemical weathering, without direct impact on DSi outputs from soils to stream water. Tracks for further assessing the role of plant Si cycling on chemical weathering, Si and C cycles were suggested: 1) estimates of BSi fluxes that were wrongly based on the assumption that the amount of DSi leached out from soils is linked to the magnitude of plant Si cycling and/or to BSi concentration in soils should be reappraised and 2) changes in the magnitude of plant Si cycling should be accounted in geochemical carbon cycle models, for one of the plant-induced weathering mechanisms.

The role of savannas in the terrestrial Si cycle: A case-study from Lamto, Ivory Coast

NASA Astrophysics Data System (ADS)

Alexandre, A. E.; Abbadie, L.

2011-12-01

Savannas currently occupy a fifth of the earth's land surface and are predicted to expand in the next few centuries at the expense of tropical forests, mainly as a result of deforestation and human fires. Can such a vegetation trend impact, through changes in plant Si cycling, the lithogenic silicon (LSi) release into soils (through chemical weathering) and the net dissolved Si (DSi) outputs from soils to stream water (through chemical denudation)? The first step of an investigation requires quantifying the net Si fluxes involved in the plant/soil system. Here, a schematic steady-state Si cycle, established for a tropical humid savanna (Lamto, Ivory Coast) that developed on a ferruginous soil and is subjected to annual fires, is presented. Erosion was assumed to be insignificant. LSi and biogenic Si (BSi under the form of phytoliths) pools were measured, and Si fluxes were estimated from Si concentrations and mass balance calculation. Identification of plant and soil phytoliths indicated that the soil BSi pool is in equilibrium with the current BSi input by the savanna. In the soil column, mixing between a young rapidly recycled BSi pool and an old stable BSi pool is attested by a mixing line equation. Storage of the old BSi pool is assimilated as a BSi output from the plant/soil system. A BSi output additionally occurs after annual fires, when ashes are exported. Both BSi outputs decrease as much the BSi dissolution. In order to uptake constant DSi flux, the savanna increases by three to eight times the net LSi release, depending upon the post-fire ash exportation scenario. A comparison between savanna and rainforest Si cycles that maximizes the differences in plant/soil systems and minimizes differences in climate is presented. The comparison revealed that BSi storage is higher in the savanna soil than in the rainforest soil, mainly due to BSi production that is twice higher in the savanna (127 vs 67 kg/ha/yr). The resulting LSi release that is enhanced by plant uptake is more than 1.5 higher in the savanna than in the rainforest (from 33 to 85 kg/ha/yr in the savanna vs 21 kg/ha/yr in the rainforest). On the contrary, DSi output from soils to stream water, which is not controlled by plant Si cycling but more likely by the soil hydrological regime (or meteoric weathering), is close to twice as high in the rainforest/ferrallitic soil ecosystem (16 vs 9 kg/ha/yr). This case study suggests that the predicted expansion of savannas at the expense of forests should significantly increase DSi uptake by plants, BSi storage in soils, BSi output with ash exportation, and, hence, LSi release through chemical weathering, without direct impact on DSi outputs from soils to stream water. Tracks for further assessing the role of plant Si cycling on chemical weathering, Si and C cycles were suggested: 1) estimates of BSi fluxes that were wrongly based on the assumption that the amount of DSi leached out from soils is linked to the magnitude of plant Si cycling and/or to BSi concentration in soils should be reappraised and 2) changes in the magnitude of plant Si cycling should be accounted in geochemical carbon cycle models, for one of the plant-induced weathering mechanisms.

Geography and past climate changes have shaped the evolution of a widespread lizard from the Chilean hotspot.

PubMed

Muñoz-Mendoza, Carla; D'Elía, Guillermo; Panzera, Alejandra; Méndez T, Marco A; Villalobos-Leiva, Amado; Sites, Jack W; Victoriano, Pedro F

2017-11-01

The complex orogenic history and structure of Southern South America, coupled with Pleistocene glacial cycles, have generated paleoclimatic and environmental changes that influenced the spatial distribution and genetic composition of natural populations. Despite the increased number of phylogeographic studies in this region and given the frequent idiosyncratic phylogeographic patterns, there is still the need to focus research especially on species that are currently distributed within a wide range of bioclimatic regimes, and that historically have been subject to contrasting scenarios. Liolaemus tenuis is a widely distributed lizard species inhabiting latitudinally in almost 1000km through central and southern Chile. Here we describe the geographical patterns of genetic variation and lineage diversification within L. tenuis, and their association with geography and Pleistocene glaciations, using sequences from one mitochondrial and two nuclear genes, and five microsatellite loci, and covering most of the species distributional range. Our results revealed a high diversity both within and among populations, as well as two phylogeographic breaks, which are consistent with two of the larger rivers of central Chile, the Maipo and Biobío Rivers. Liolaemus tenuis is characterized by several allopatric lineages, especially in its north and central range, which suggest a history of multiple vicariance processes. Conversely, populations found in the southern range, south of the Biobío River, show signatures of recent decreases in effective population sizes, coupled with recent range expansions and secondary contact. Niche "envelope" data are consistent with patterns of genetic variation; both suggest a history of discontinuous areas of relatively stable populations throughout all of the distribution of L. tenuis. These data are also consistent with higher probabilities of habitat suitability north of the Maipo River (ca. 33°S), in both coastal areas and the "Intermediate Depression" between 34° and 37°S, as well as in the southern Coastal Cordillera between the Biobío and Araucanía regions. Interestingly, both molecular and niche envelope modeling data suggest that some populations may have persisted in fragmented refugia in Andean valleys, within the limits of the ice sheet. Finally, our results suggest that several populations of L. tenuis colonized glaciated regions from refugial areas in lowlands and coastal regions, and in the southern distribution, historic migration events would have occurred from refugial areas within the limits of the ice sheet. Copyright © 2017 Elsevier Inc. All rights reserved.

Reading, Learning and Enacting: Interpretation at Visitor Sites in the Wet Tropics Rainforest of Australia

ERIC Educational Resources Information Center

McNamara, Karen Elizabeth; Prideaux, Bruce

2010-01-01

The northern Wet Tropics rainforest of Australia was declared a world heritage site in 1988 and now supports an extensive tourism industry that attracts an estimated 2.5 million local and international visits annually. As part of the visitor experience, many sites include both environmental and cultural interpretation experiences, which range from…

Leaf hydraulic architecture correlates with regeneration irradiance in tropical rainforest trees

Treesearch

Lawren Sack; Melvin T. Tyree; N. Michele Holbrook; N. Michele Holbrook

2005-01-01

The leaf hydraulic conductance (Kleaf)s a major determinant of plant water transport capacity. Here, we measured Kleaf, and its basis in the resistances of leaf components, for fully illuminated leaves of five tree species that regenerate in deep shade, and five that regenerate in gaps or clearings, in Panamanian lowland tropical rainforest. We also determined...

Hurricanes, Coral Reefs and Rainforests: Resistance, Ruin and Recovery in the Caribbean

Treesearch

A. E. Lugo; C. S. Rogers; S. W Nixon

2000-01-01

The coexistence of hurricanes, coral reefs, and rainforests in the Caribbean demonstrates that highly structured ecosystems with great diversity can flourish in spite of recurring exposure to intense destructive energy. Coral reefs develop in response to wave energy and resist hurricanes largely by virtue of their structural strength. Limited fetch also protects some...

Children's Perceptions and Learning about Tropical Rainforests: An Analysis of Their Drawings

ERIC Educational Resources Information Center

Bowker, Rob

2007-01-01

This study analysed 9 to 11 year old children's drawings of tropical rainforests immediately before and after a visit to the Humid Tropics Biome at the Eden Project, Cornwall, UK. A theoretical framework derived from considerations of informal learning and constructivism was used as a basis to develop a methodology to interpret the children's…

The Tropical Rainforest: A Valuable Natural History Resource for Students in Singapore

ERIC Educational Resources Information Center

Chin, Christine; bin Rajib, Tayeb

2010-01-01

Students living in cities seldom experience the rural outdoors when learning science. This lack of first-hand experience with nature is of concern, especially when they are learning about animals, plants and ecosystems. This study investigated how a teacher in Singapore organised a field trip to the rainforest to help his students bridge the gap…

Linking LiDAR with streamwater biogeochemistry in coastal temperate rainforest watersheds

Treesearch

Jason B. Fellman; Brian Buma; Eran Hood; Richard T. Edwards; David V. D’Amore

2017-01-01

The goal of this study was to use watershed characteristics derived from light detection and ranging (LiDAR) data to predict stream biogeochemistry in Perhumid Coastal Temperate Rainforest (PCTR) watersheds. Over a 2-day period, we sampled 37 streams for concentrations of dissolved C, N, P, major cations, and measures of dissolved organic matter quality (specific...

Darwin's Doodles

ERIC Educational Resources Information Center

Kirkman, Robbie

2016-01-01

The Eden Project, an educational charity based in Cornwall, is home to the largest rainforest in captivity and is a unique and awe-inspiring destination. It is one thing to talk about the idea of adaptation to environment but quite another to actually go into the rainforest and use your senses to explore up close living examples of ingenious plant…

Biogenic Potassium Salt Particles as Seeds for Secondary Organic Aerosol in the Amazon

NASA Astrophysics Data System (ADS)

Pöhlker, Christopher; Wiedemann, Kenia T.; Sinha, Bärbel; Shiraiwa, Manabu; Gunthe, Sachin S.; Smith, Mackenzie; Su, Hang; Artaxo, Paulo; Chen, Qi; Cheng, Yafang; Elbert, Wolfgang; Gilles, Mary K.; Kilcoyne, Arthur L. D.; Moffet, Ryan C.; Weigand, Markus; Martin, Scot T.; Pöschl, Ulrich; Andreae, Meinrat O.

2012-08-01

The fine particles serving as cloud condensation nuclei in pristine Amazonian rainforest air consist mostly of secondary organic aerosol. Their origin is enigmatic, however, because new particle formation in the atmosphere is not observed. Here, we show that the growth of organic aerosol particles can be initiated by potassium-salt-rich particles emitted by biota in the rainforest. These particles act as seeds for the condensation of low- or semi-volatile organic compounds from the atmospheric gas phase or multiphase oxidation of isoprene and terpenes. Our findings suggest that the primary emission of biogenic salt particles directly influences the number concentration of cloud condensation nuclei and affects the microphysics of cloud formation and precipitation over the rainforest.

Recruitment dynamics in a rainforest seedling community: context-independent impact of a keystone consumer.

PubMed

Green, Peter T; O'Dowd, Dennis J; Lake, P S

2008-05-01

The influence of keystone consumers on community structure is frequently context-dependent; the same species plays a central organising role in some situations, but not others. On Christmas Island, in the Indian Ocean, a single species of omnivorous land crab, Gecarcoidea natalis, dominates the forest floor across intact rainforest. We hypothesised that this consumer plays a key role in regulating seedling recruitment and in controlling litter dynamics on the island, independent of the type of vegetation in which it occurred. To test this hypothesis, we conducted crab exclusion experiments in two forest types on the island and followed the dynamics of seedling recruitment and litter processing for six years. To determine if these effects were likely to be general across the island, we compared land crab densities and seedling abundance and diversity at ten sites across island rainforest. Surveys across island rainforest showed that seedlings of species susceptible to predation by land crabs are consistently rare. Abundance and diversity of these species were negatively correlated to red crab abundance. Although red land crabs may be important determinants of seedling recruitment to the overstorey, differences in overstorey and seedling composition at the sites suggests that recruitment of vulnerable trees still occurs at a temporal scale exceeding that of this study. These "windows" of recruitment may be related to infrequent events that reduce the effects of land crabs. Our results suggest that unlike the context dependence of most keystone consumers in continental systems, a single consumer, the red land crab, consistently controls the dynamics of seedling recruitment across this island rainforest.

Culture or climate? The relative influences of past processes on the composition of the lowland Congo rainforest.

PubMed

Brncic, Terry M; Willis, Katherine J; Harris, David J; Washington, Richard

2007-02-28

This paper presents the results from a palaeoecological study to establish the impact of prehistoric human activity and climate change on the vegetation and soils of the Goualougo area of the Nouabalé-Ndoki National Park, in the Republic of Congo (Congo-Brazzaville). This is a region that is known from previous work (through evidence of pottery, furnaces and charcoal layers beneath the present day rainforest vegetation) to have had prehistoric settlement dating back to at least 2000 calibrated years before present. In addition, there is climatic evidence to suggest that significant variations in precipitation have occurred in central Africa over the last few millennia. Presently, the region is covered in uninhabited moist semi-evergreen rainforest. Key research questions addressed in this paper include the extent to which the present-day composition of rainforest in this region is as a result of processes of the past (climate change and/or human activity), and the resilience of the rainforest to these perturbations. Statistical analyses of pollen, microscopic charcoal and geochemical data are used to determine the relationship over time between vegetation dynamics and climate change, anthropogenic burning and metal smelting. Significant changes in forest composition are linked to burning and climate change but not metallurgy. The strongest influence on the present day composition appears to be related to the increased anthropogenic burning that started approximately 1000 years ago. Results from this study are discussed in terms of their implications for the present and future management of this globally important forested region.

Combined effects of climate change and forest clearing on the Amazon vegetation: Projections for 2080-2100

NASA Astrophysics Data System (ADS)

Cook, K. H.; Vizy, E. K.

2007-05-01

A regional climate model with resolution of 60 km coupled with a potential vegetation model is used to simulate future vegetation distributions over South America. The coupled model, which produces an accurate representation of today's climate and vegetation, is forced with increasing atmospheric CO2 concentrations, sea surface temperature from a global model, and scenarios of future land use practices to predict climate and vegetation distributions for the last 2 decades of the 21st century. When only climate change is considered, under a business-as-usual scenario for global emissions, the extent of the Amazon rainforest is reduced by about 70 per cent by the end of this century, and the shrubland (caatinga) vegetation of Brazil's Nordeste region spreads westward and southward. Reductions in annual mean precipitation are widespread and rainfall becomes insufficient to support the rainforest in these regions, but some areas receive more precipitation. The length of the dry season increases in the central and southern Amazon in association with changes in the large-scale tropical circulation. Without this change in seasonality, local refugia of Amazon vegetation would be preserved and the retreat of the rainforest would be somewhat less extensive. Including various projections of future land use practices in addition to climate change may accelerate the unrecoverable demise of the rainforest and feedback to modify climate on regional space scales. The portions of the rainforest that are most vulnerable to climate change are the same as those that are under the most pressure from human activity, presenting a remarkable competition.

Foraging ecology and occurrence of 7 sympatric babbler species (Timaliidae) in the lowland rainforest of Borneo and peninsular Malaysia.

PubMed

Styring, Alison R; Ragai, Roslina; Zakaria, Mohamed; Sheldon, Frederick H

2016-08-01

Understanding foraging strategies of birds is essential to understanding mechanisms of their community assembly. To provide such information on a key Southeast Asian rainforest family, the babblers (Timaliidae), we evaluated foraging behavior and abundance in 7 morphologically and behaviorally similar sympatric species ( Cyanoderma erythropterum , C. rufifrons , Stachyris maculata , S. nigricollis, S. poliocephala , Macronus ptilosus , and Mixornis gularis ) in 5 habitats defined by structural complexity: (1) continuous native rainforest, (2) logged native rainforest fragments, (3) mature industrial tree plantation, (4) young industrial plantation, and (5) oil palm plantation. Enough data were obtained to compare abundance in all 7 species and foraging behavior in 5. All species were common in forest fragments and mature industrial tree plantations and less so in continuous rainforest and young industrial plantations; only M. gularis occurred in oil palm. In terms of foraging, M. gularis was the greatest generalist; C. rufifrons foraged mainly on live leaves in the forest midstory; and S. maculata , C. erythropterum , and M. ptilosus foraged mainly on dead leaves suspended in understory vegetation at significantly different heights. The dead-leaf substrate depends on a rich supply of falling leaves and extensive understory structure, conditions most common in native forest and old industrial plantations, and less so in mature forest, young plantations, and oil palm. Because of the importance of foraging data to understanding and managing biodiversity, we encourage the development of foraging fields in eBird (ebird.org), so that birdwatchers may help collect these relatively rare data.

Using a rainforest-flame forest mosaic to test the hypothesis that leaf and litter fuel flammability is under natural selection.

PubMed

Clarke, Peter J; Prior, Lynda D; French, Ben J; Vincent, Ben; Knox, Kirsten J E; Bowman, David M J S

2014-12-01

We used a mosaic of infrequently burnt temperate rainforest and adjacent, frequently burnt eucalypt forests in temperate eastern Australia to test whether: (1) there were differences in flammability of fresh and dried foliage amongst congeners from contrasting habitats, (2) habitat flammability was related to regeneration strategy, (3) litter fuels were more flammable in frequently burnt forests, (4) the severity of a recent fire influenced the flammability of litter (as this would suggest fire feedbacks), and (5) microclimate contributed to differences in fire hazard amongst habitats. Leaf-level comparisons were made among 11 congeneric pairs from rainforest and eucalypt forests. Leaf-level ignitability, combustibility and sustainability were not consistently higher for taxa from frequently burnt eucalypt forests, nor were they higher for species with fire-driven recruitment. The bulk density of litter-bed fuels strongly influenced flammability, but eucalypt forest litter was not less dense than rainforest litter. Ignitability, combustibility and flame sustainability of community surface fuels (litter) were compared using fuel arrays with standardized fuel mass and moisture content. Forests previously burned at high fire severity did not have consistently higher litter flammability than those burned at lower severity or long unburned. Thus, contrary to the Mutch hypothesis, there was no evidence of higher flammability of litter fuels or leaves from frequently burnt eucalypt forests compared with infrequently burnt rainforests. We suggest the manifest pyrogenicity of eucalypt forests is not due to natural selection for more flammable foliage, but better explained by differences in crown openness and associated microclimatic differences.

Foraging ecology and occurrence of 7 sympatric babbler species (Timaliidae) in the lowland rainforest of Borneo and peninsular Malaysia

PubMed Central

Ragai, Roslina; Zakaria, Mohamed; Sheldon, Frederick H.

2016-01-01

Abstract Understanding foraging strategies of birds is essential to understanding mechanisms of their community assembly. To provide such information on a key Southeast Asian rainforest family, the babblers (Timaliidae), we evaluated foraging behavior and abundance in 7 morphologically and behaviorally similar sympatric species (Cyanoderma erythropterum, C. rufifrons, Stachyris maculata, S. nigricollis, S. poliocephala, Macronus ptilosus, and Mixornis gularis) in 5 habitats defined by structural complexity: (1) continuous native rainforest, (2) logged native rainforest fragments, (3) mature industrial tree plantation, (4) young industrial plantation, and (5) oil palm plantation. Enough data were obtained to compare abundance in all 7 species and foraging behavior in 5. All species were common in forest fragments and mature industrial tree plantations and less so in continuous rainforest and young industrial plantations; only M. gularis occurred in oil palm. In terms of foraging, M. gularis was the greatest generalist; C. rufifrons foraged mainly on live leaves in the forest midstory; and S. maculata, C. erythropterum, and M. ptilosus foraged mainly on dead leaves suspended in understory vegetation at significantly different heights. The dead-leaf substrate depends on a rich supply of falling leaves and extensive understory structure, conditions most common in native forest and old industrial plantations, and less so in mature forest, young plantations, and oil palm. Because of the importance of foraging data to understanding and managing biodiversity, we encourage the development of foraging fields in eBird (ebird.org), so that birdwatchers may help collect these relatively rare data. PMID:29491923

Development of silvicultural systems for maintaining old-growth conditions in the temperate rainforest of southeast Alaska.

Treesearch

Michael H. McClellan

2004-01-01

In the old-growth temperate rainforests of southeast Alaska, concerns over clearcutting effects on habitat, visual quality, slope stability, and biodiversity have created a demand for the use of other silvicultural systems. The forest vegetation and animal taxa of southeast Alaska appear to be well adapted to frequent, widespread, small-scale disturbance, suggesting...

The role of windstorm exposure and yellow cedar decline on landslide susceptibility in southeast Alaskan temperate rainforests

Treesearch

Brian Buma; Adelaide C. Johnson

2015-01-01

Interactions between ecological disturbances have the potential to alter other disturbances and their associated regimes, such as the likelihood, severity, and extent of events. The influence of exposure to wind and yellow cedar decline on the landslide regime of Alaskan temperate rainforests was explored using presence-only modeling techniques. The wind regime was...

A new species of Acroleptus Bourgeois (Coleoptera: Lycidae) from the Brazilian Amazonian rainforest, with a note on its homonymy with Acroleptus Cabanis (Aves).

PubMed

Ferreira, Vinicius S

2015-04-24

Acroleptus costae sp. nov. is described from the Brazilian Amazonian rainforest, raising the diversity of the formerly monotypic genus to two known species. The validity of Acroleptus Bourgeois, 1886 (Insecta) is maintained while Acroleptus Cabanis, 1861 (Aves) is considered to be an incorrect subsequent spelling.

Vulnerability of wetland soil carbon stocks to climate warming in the perhumid coastal temperate rainforest

Treesearch

Jason B. Fellman; David V. D’Amore; Eran Hood; Pat Cunningham

2017-01-01

The perhumid coastal temperate rainforest (PCTR) of southeast Alaska has some of the densest soil organic carbon (SOC) stocks in the world (>300 Mg C ha-1) but the fate of this SOC with continued warming remains largely unknown. We quantified dissolved organic carbon (DOC) and carbon dioxide (CO2) yields from four...

Canopy arthropod responses to experimental canopy opening and debris deposition in a tropical rainforest subject to hurricanes

Treesearch

Timothy D. Schowalter; Michael R. Willig; Steven J. Presley

2014-01-01

We analyzed responses of canopy arthropods on seven representative early and late successional overstory and understory tree species to a canopy trimming experiment designed to separate effects of canopy opening and debris pulse (resulting from hurricane disturbance) in a tropical rainforest ecosystem at the Luquillo Experimental Forest Long-Term Ecological Research (...

A new species of Tropidopedia from the Amazon rainforest, Brazil (Hymenoptera: Apidae), with a revised phylogenetic overview of the genus.

PubMed

Mahlmann, Thiago; De Oliveira, Marcio L

2015-10-15

We describe a new species of the bee tribe Tapinotaspidini, Tropidopedia guaranae Mahlmann & Oliveira sp. n. from the Amazon rainforest, Amazonas, Brazil. We emend the phylogenetic tree of Aguiar & Melo (2007) to include the new species and comment upon some characters presented by those authors.

The Rainforest Still Needs Us: The Forman School's 20 Years in the Mountains of Costa Rica

ERIC Educational Resources Information Center

Lawson, Leesa

2013-01-01

The search for solutions to protect the rainforest, while offering local farmers a sustainable means of making a living, started at The Forman School as a search to fully engage its students in learning. The Forman School is an independent college preparatory school for students with language-based learning differences (LD). This article discusses…

Rainforests and Rousseau

ERIC Educational Resources Information Center

Rohrbach, Marla

2012-01-01

One of the fifth-grade art-curriculum objectives is to create a relief print. In this era of budget cuts, the author was looking for a way for her students to meet this objective by making colorful prints without using a lot of expensive printing ink. She knew she wanted to use a rainforest animal theme, as well as share the colorful art of Henri…

Rain Forest: The Latest Information and Hands-on Activities To Explore Animals, Plants, and Geography. Grades 2-5.

ERIC Educational Resources Information Center

Bernard, Robin

This book contains information and activities to help make the study of rainforests an exciting exploration for teachers and students. Students explore the animals, plants, and geography of the rainforest by completing hands-on activities from various disciplines. This book contains five units: (1) "Living Layers"; (2) "Animals, Animals, Animals";…

A deforestation-induced tipping point for the South American monsoon system.

PubMed

Boers, Niklas; Marwan, Norbert; Barbosa, Henrique M J; Kurths, Jürgen

2017-01-25

The Amazon rainforest has been proposed as a tipping element of the earth system, with the possibility of a dieback of the entire ecosystem due to deforestation only of parts of the rainforest. Possible physical mechanisms behind such a transition are still subject to ongoing debates. Here, we use a specifically designed model to analyse the nonlinear couplings between the Amazon rainforest and the atmospheric moisture transport from the Atlantic to the South American continent. These couplings are associated with a westward cascade of precipitation and evapotranspiration across the Amazon. We investigate impacts of deforestation on the South American monsoonal circulation with particular focus on a previously neglected positive feedback related to condensational latent heating over the rainforest, which strongly enhances atmospheric moisture inflow from the Atlantic. Our results indicate the existence of a tipping point. In our model setup, crossing the tipping point causes precipitation reductions of up to 40% in non-deforested parts of the western Amazon and regions further downstream. The responsible mechanism is the breakdown of the aforementioned feedback, which occurs when deforestation reduces transpiration to a point where the available atmospheric moisture does not suffice anymore to release the latent heat needed to maintain the feedback.

A deforestation-induced tipping point for the South American monsoon system

PubMed Central

Boers, Niklas; Marwan, Norbert; Barbosa, Henrique M. J.; Kurths, Jürgen

2017-01-01

The Amazon rainforest has been proposed as a tipping element of the earth system, with the possibility of a dieback of the entire ecosystem due to deforestation only of parts of the rainforest. Possible physical mechanisms behind such a transition are still subject to ongoing debates. Here, we use a specifically designed model to analyse the nonlinear couplings between the Amazon rainforest and the atmospheric moisture transport from the Atlantic to the South American continent. These couplings are associated with a westward cascade of precipitation and evapotranspiration across the Amazon. We investigate impacts of deforestation on the South American monsoonal circulation with particular focus on a previously neglected positive feedback related to condensational latent heating over the rainforest, which strongly enhances atmospheric moisture inflow from the Atlantic. Our results indicate the existence of a tipping point. In our model setup, crossing the tipping point causes precipitation reductions of up to 40% in non-deforested parts of the western Amazon and regions further downstream. The responsible mechanism is the breakdown of the aforementioned feedback, which occurs when deforestation reduces transpiration to a point where the available atmospheric moisture does not suffice anymore to release the latent heat needed to maintain the feedback. PMID:28120928

Photosynthetic temperature responses of tree species in Rwanda: evidence of pronounced negative effects of high temperature in montane rainforest climax species

NASA Astrophysics Data System (ADS)

Vårhammar, Angelica; Wallin, Göran; McLean, Christopher M.; Dusenge, Mirindi Eric; Medlyn, Belinda E.; Hasper, Thomas B.; Nsabimana, Donat; Uddling, Johan

2015-04-01

The sensitivity of photosynthetic metabolism to temperature has been identified as a key uncertainty for projecting the magnitude of the terrestrial feedback on future climate change. While temperature responses of photosynthetic capacities have been comparatively well investigated in temperate species, the responses of tropical tree species remain unexplored. We compared the responses of seedlings of native cold-adapted tropical montane rainforest tree species to exotic warm-adapted plantation species, all growing in an intermediate temperature common garden in Rwanda. Leaf gas exchange responses to CO2 at different temperatures (20 - 40 C) were used to assess the temperature responses of biochemical photosynthetic capacities. Analyses revealed a lower optimum temperature for photosynthetic electron transport rates than for Rubisco carboxylation rates, along with lower electron transport optima in the native cold-adapted than in the exotic warm-adapted species. The photosynthetic optimum temperatures were generally exceeded by daytime peak leaf temperatures, in particular in the native montane rainforest climax species. This study thus provides evidence of pronounced negative effects of high temperature in tropical trees and indicates high susceptibility of montane rainforest climax species to future global warming. (Reference: New Phytologist, in press)

Ant diversity as a direct and indirect driver of pselaphine rove beetle (Coleoptera: Staphylinidae) functional diversity in tropical rainforests, Sabah, Malaysian Borneo.

PubMed

Psomas, Elizabeth; Holdsworth, Sholto; Eggleton, Paul

2018-04-20

Pselaphinae is a species-rich beetle subfamily found globally, with many exhibiting myrmecophily-a symbiotic association with ants. Pselaphine-ant associations vary from facultative to obligate, but direct behavioral observations still remain scarce. Pselaphines are speciose and ecologically abundant within tropical leaf litter invertebrate communities where ants dominate, implying a potentially important ecological role that may be affected by habitat disturbances that impact ants. In this study, we measured and analyzed putative functional traits of leaf litter pselaphines associated with myrmecophily through morphometric analysis. We calculated "myrmecophile functional diversity" of pselaphines at different sites and examined this measure's relationship with ant abundance, in both old growth and logged rainforest sites in Sabah, Borneo. We show that myrmecophile functional diversity of pselaphine beetles increases as ant abundance increases. Old growth rainforest sites support a high abundance of ants, which is associated with a high abundance of probable myrmecophilous pselaphines. These results suggest a potential link between adult morphological characters and the functional role these beetles play in rainforest litter as ecological interaction partners with ants. © 2018 Wiley Periodicals, Inc.

Implications of global warming for the climate of African rainforests

PubMed Central

James, Rachel; Washington, Richard; Rowell, David P.

2013-01-01

African rainforests are likely to be vulnerable to changes in temperature and precipitation, yet there has been relatively little research to suggest how the regional climate might respond to global warming. This study presents projections of temperature and precipitation indices of relevance to African rainforests, using global climate model experiments to identify local change as a function of global temperature increase. A multi-model ensemble and two perturbed physics ensembles are used, one with over 100 members. In the east of the Congo Basin, most models (92%) show a wet signal, whereas in west equatorial Africa, the majority (73%) project an increase in dry season water deficits. This drying is amplified as global temperature increases, and in over half of coupled models by greater than 3% per °C of global warming. Analysis of atmospheric dynamics in a subset of models suggests that this could be partly because of a rearrangement of zonal circulation, with enhanced convection in the Indian Ocean and anomalous subsidence over west equatorial Africa, the Atlantic Ocean and, in some seasons, the Amazon Basin. Further research to assess the plausibility of this and other mechanisms is important, given the potential implications of drying in these rainforest regions. PMID:23878329

Conclusion: applying South East Asia Rainforest Research Programme science to land-use management policy and practice in a changing landscape and climate

PubMed Central

Walsh, Rory P. D.; Nussbaum, Ruth; Fowler, David; Weilenmann, Maja; Hector, Andy

2011-01-01

The context and challenges relating to the remaining tropical rainforest are briefly reviewed and the roles which science can play in addressing questions are outlined. Key messages which articles in the special issue, mainly based on projects of the Royal Society South East Asia Rainforest Research Programme (SEARRP), have raised of relevance to policies on land use, land management and REDD+ are then considered. Results from the atmospheric science and hydrology papers, and some of the ecological ones, demonstrate the very high ecosystem service values of rainforest (compared with oil palm) in maintaining high biodiversity, good local air quality, reducing greenhouse emissions, and reducing landslide, flooding and sedimentation consequences of climate change—and hence provide science to underpin the protection of remaining forest, even if degraded and fragmented. Another group of articles test ways of restoring forest quality (in terms of biodiversity and carbon value) or maintaining as high biodiversity and ecological functioning levels as possible via intelligent design of forest zones and fragments within oil palm landscapes. Finally, factors that have helped to enhance the policy relevance of SEARRP projects and dissemination of their results to decision-makers are outlined. PMID:22006974

Natural disturbance reduces disease risk in endangered rainforest frog populations

PubMed Central

Roznik, Elizabeth A.; Sapsford, Sarah J.; Pike, David A.; Schwarzkopf, Lin; Alford, Ross A.

2015-01-01

Natural disturbances can drive disease dynamics in animal populations by altering the microclimates experienced by hosts and their pathogens. Many pathogens are highly sensitive to temperature and moisture, and therefore small changes in habitat structure can alter the microclimate in ways that increase or decrease infection prevalence and intensity in host populations. Here we show that a reduction of rainforest canopy cover caused by a severe tropical cyclone decreased the risk of endangered rainforest frogs (Litoria rheocola) becoming infected by a fungal pathogen (Batrachochytrium dendrobatidis). Reductions in canopy cover increased the temperatures and rates of evaporative water loss in frog microhabitats, which reduced B. dendrobatidis infection risk in frogs by an average of 11–28% in cyclone-damaged areas, relative to unaffected areas. Natural disturbances to the rainforest canopy can therefore provide an immediate benefit to frogs by altering the microclimate in ways that reduce infection risk. This could increase host survival and reduce the probability of epidemic disease outbreaks. For amphibian populations under immediate threat from this pathogen, targeted manipulation of canopy cover could increase the availability of warmer, drier microclimates and therefore tip the balance from host extinction to coexistence. PMID:26294048

Natural disturbance reduces disease risk in endangered rainforest frog populations.

PubMed

Roznik, Elizabeth A; Sapsford, Sarah J; Pike, David A; Schwarzkopf, Lin; Alford, Ross A

2015-08-21

Natural disturbances can drive disease dynamics in animal populations by altering the microclimates experienced by hosts and their pathogens. Many pathogens are highly sensitive to temperature and moisture, and therefore small changes in habitat structure can alter the microclimate in ways that increase or decrease infection prevalence and intensity in host populations. Here we show that a reduction of rainforest canopy cover caused by a severe tropical cyclone decreased the risk of endangered rainforest frogs (Litoria rheocola) becoming infected by a fungal pathogen (Batrachochytrium dendrobatidis). Reductions in canopy cover increased the temperatures and rates of evaporative water loss in frog microhabitats, which reduced B. dendrobatidis infection risk in frogs by an average of 11-28% in cyclone-damaged areas, relative to unaffected areas. Natural disturbances to the rainforest canopy can therefore provide an immediate benefit to frogs by altering the microclimate in ways that reduce infection risk. This could increase host survival and reduce the probability of epidemic disease outbreaks. For amphibian populations under immediate threat from this pathogen, targeted manipulation of canopy cover could increase the availability of warmer, drier microclimates and therefore tip the balance from host extinction to coexistence.

Assessing tropical rainforest growth traits: Data - Model fusion in the Congo basin and beyond.

NASA Astrophysics Data System (ADS)

Pietsch, S.

2016-12-01

Virgin forest ecosystems resemble the key reference level for natural tree growth dynamics. The mosaic cycle concept describes such dynamics as local disequilibria driven by patch level succession cycles of breakdown, regeneration, juvenescence and old growth. These cycles, however, may involve different traits of light demanding and shade tolerant species assemblies. In this work a data model fusion concept will be introduced to assess the differences in growth dynamics of the mosaic cycle of the Western Congolian Lowland Rainforest ecosystem. Field data from 34 forest patches located in an ice age forest refuge, recently pinpointed to the ground and still devoid of direct human impact up to today - resemble the data base. A 3D error assessment procedure versus BGC model simulations for the 34 patches revealed two different growth dynamics, consistent with observed growth traits of pioneer and late succession species assemblies of the Western Congolian Lowland rainforest. An application of the same procedure to Central American Pacific rainforests confirms the strength of the 3D error field data model fusion concept to assess different growth traits of the mosaic cycle of natural forest dynamics.

A deforestation-induced tipping point for the South American monsoon system

NASA Astrophysics Data System (ADS)

Boers, Niklas; Marwan, Norbert; Barbosa, Henrique M. J.; Kurths, Jürgen

2017-01-01

The Amazon rainforest has been proposed as a tipping element of the earth system, with the possibility of a dieback of the entire ecosystem due to deforestation only of parts of the rainforest. Possible physical mechanisms behind such a transition are still subject to ongoing debates. Here, we use a specifically designed model to analyse the nonlinear couplings between the Amazon rainforest and the atmospheric moisture transport from the Atlantic to the South American continent. These couplings are associated with a westward cascade of precipitation and evapotranspiration across the Amazon. We investigate impacts of deforestation on the South American monsoonal circulation with particular focus on a previously neglected positive feedback related to condensational latent heating over the rainforest, which strongly enhances atmospheric moisture inflow from the Atlantic. Our results indicate the existence of a tipping point. In our model setup, crossing the tipping point causes precipitation reductions of up to 40% in non-deforested parts of the western Amazon and regions further downstream. The responsible mechanism is the breakdown of the aforementioned feedback, which occurs when deforestation reduces transpiration to a point where the available atmospheric moisture does not suffice anymore to release the latent heat needed to maintain the feedback.

Functional decay in tree community within tropical fragmented landscapes: Effects of landscape-scale forest cover.

PubMed

Rocha-Santos, Larissa; Benchimol, Maíra; Mayfield, Margaret M; Faria, Deborah; Pessoa, Michaele S; Talora, Daniela C; Mariano-Neto, Eduardo; Cazetta, Eliana

2017-01-01

As tropical rainforests are cleared, forest remnants are increasingly isolated within agricultural landscapes. Understanding how forest loss impacts on species diversity can, therefore, contribute to identifying the minimum amount of habitat required for biodiversity maintenance in human-modified landscapes. Here, we evaluate how the amount of forest cover, at the landscape scale, affects patterns of species richness, abundance, key functional traits and common taxonomic families of adult trees in twenty Brazilian Atlantic rainforest landscapes. We found that as forest cover decreases, both tree community richness and abundance decline, without exhibiting a threshold. At the family-level, species richness and abundance of the Myrtaceae and Sapotaceae were also negatively impacted by the percent forest remaining at the landscape scale. For functional traits, we found a reduction in shade-tolerant, animal-dispersed and small-seeded species following a decrease in the amount of forest retained in landscapes. These results suggest that the amount of forest in a landscape is driving non-random losses in phylogenetic and functional tree diversity in Brazil's remaining Atlantic rainforests. Our study highlights potential restraints on the conservation value of Atlantic rainforest remnants in deforested landscapes in the future.

Implications of global warming for the climate of African rainforests.

PubMed

James, Rachel; Washington, Richard; Rowell, David P

2013-01-01

African rainforests are likely to be vulnerable to changes in temperature and precipitation, yet there has been relatively little research to suggest how the regional climate might respond to global warming. This study presents projections of temperature and precipitation indices of relevance to African rainforests, using global climate model experiments to identify local change as a function of global temperature increase. A multi-model ensemble and two perturbed physics ensembles are used, one with over 100 members. In the east of the Congo Basin, most models (92%) show a wet signal, whereas in west equatorial Africa, the majority (73%) project an increase in dry season water deficits. This drying is amplified as global temperature increases, and in over half of coupled models by greater than 3% per °C of global warming. Analysis of atmospheric dynamics in a subset of models suggests that this could be partly because of a rearrangement of zonal circulation, with enhanced convection in the Indian Ocean and anomalous subsidence over west equatorial Africa, the Atlantic Ocean and, in some seasons, the Amazon Basin. Further research to assess the plausibility of this and other mechanisms is important, given the potential implications of drying in these rainforest regions.

Functional decay in tree community within tropical fragmented landscapes: Effects of landscape-scale forest cover

PubMed Central

Benchimol, Maíra; Mayfield, Margaret M.; Faria, Deborah; Pessoa, Michaele S.; Talora, Daniela C.; Mariano-Neto, Eduardo; Cazetta, Eliana

2017-01-01

As tropical rainforests are cleared, forest remnants are increasingly isolated within agricultural landscapes. Understanding how forest loss impacts on species diversity can, therefore, contribute to identifying the minimum amount of habitat required for biodiversity maintenance in human-modified landscapes. Here, we evaluate how the amount of forest cover, at the landscape scale, affects patterns of species richness, abundance, key functional traits and common taxonomic families of adult trees in twenty Brazilian Atlantic rainforest landscapes. We found that as forest cover decreases, both tree community richness and abundance decline, without exhibiting a threshold. At the family-level, species richness and abundance of the Myrtaceae and Sapotaceae were also negatively impacted by the percent forest remaining at the landscape scale. For functional traits, we found a reduction in shade-tolerant, animal-dispersed and small-seeded species following a decrease in the amount of forest retained in landscapes. These results suggest that the amount of forest in a landscape is driving non-random losses in phylogenetic and functional tree diversity in Brazil’s remaining Atlantic rainforests. Our study highlights potential restraints on the conservation value of Atlantic rainforest remnants in deforested landscapes in the future. PMID:28403166

Infection of Amblyomma ovale with Rickettsia species Atlantic rainforest in Serra do Mar, São Paulo State, Brazil.

PubMed

Luz, Hermes Ribeiro; McIntosh, Douglas; Furusawa, Guilherme P; Flausino, Walter; Rozental, Tatiana; Lemos, Elba R S; Landulfo, Gabriel A; Faccini, João Luiz H

2016-10-01

Rickettsia rickettsii and Rickettsia sp. strain Atlantic rainforest, that is considered to represent a genetic variant of Rickettsia parkeri, are confirmed as being capable of infecting humans in Brazil. This study reports the detection and characterization, by PCR and nucleotide sequencing, of Rickettsia sp. strain Atlantic rain forest in Amblyomma ovale parasitizing a human, in ticks infesting dogs and in free-living ticks collected from the environment where the human infestation was recorded. The data contribute to our knowledge of infection rates in A. ovale with Rickettsia sp. strain Atlantic rainforest and identified an additional location in the state of São Paulo populated with ticks infected with this emerging pathogen. Copyright © 2016 Elsevier GmbH. All rights reserved.

Saving the rainforest through health care: medicine as conservation in Borneo.

PubMed

Ali, Robbie; Jacobs, Sonja M

2007-01-01

This article gives an overview of rainforest conservation as it relates to human health and describes the context, design, and implementation of the Kelay Conservation Health Program (KCHP). The KCHP is a health program for indigenous people living in a critical area of orangutan rainforest habitat in Indonesian Borneo also developed to aid conservation efforts there. Program design included consideration of both health and conservation goals, participatory planning in collaboration with the government health system, a focus on community managed health, capacity building, and adaptive management. After two years the program had, at relatively low cost, already had positive impacts on both human health (e.g., child immunization rates) and conservation (e.g., local forest protection measures, attitudes of villagers and government officials towards the implementing conservation agency).

Soil methane and CO2 fluxes in rainforest and rubber plantations

NASA Astrophysics Data System (ADS)

Lang, Rong; Blagodatsky, Sergey; Goldberg, Stefanie; Xu, Jianchu

2017-04-01

Expansion of rubber plantations in South-East Asia has been a land use transformation trend leading to losses of natural forest cover in the region. Besides impact on ecosystem carbon stocks, this conversion influences the dynamics of greenhouse gas fluxes from soil driven by microbial activity, which has been insufficiently studied. Aimed to understand how land use change affects the soil CO2 and CH4 fluxes, we measured surface gas fluxes, gas concentration gradient, and 13C signature in CH4 and soil organic matter in profiles in a transect in Xishuangbanna, including a rainforest site and three rubber plantation sites with age gradient. Gas fluxes were measured by static chamber method and open chamber respiration system. Soil gases were sampled from installed gas samplers at 5, 10, 30, and 75cm depth at representative time in dry and rainy season. The soil CO2 flux was comparable in rainforest and old rubber plantations, while young rubber plantation had the lowest rate. Total carbon content in the surface soil well explained the difference of soil CO2 flux between sites. All sites were CH4 sinks in dry season and uptake decreased in the order of rainforest, old rubber plantations and young rubber plantation. From dry season to rainy season, CH4 consumption decreased with increasing CH4 concentration in the soil profile at all depths. The enrichment of methane by 13CH4 shifted towards to lowerδ13C, being the evidence of enhanced CH4 production process while net surface methane flux reflected the consumption in wet condition. Increment of CH4 concentration in the profile from dry to rainy season was higher in old rubber plantation compared to rainforest, while the shifting of δ13CH4 was larger in rainforest than rubber sites. Turnover rates of soil CO2 and CH4 suggested that the 0-5 cm surface soil was the most active layer for gaseous carbon exchange. δ13C in soil organic matter and soil moisture increased from rainforest, young rubber plantation to old rubber plantations. Conversion the forest into rubber plantation decreased soil respiration in young plantation and it recovered during rubber development. However, the CH4consumption by tropical upland forest soil decreased in converted rubber plantations of all ages, with more decrement in old plantation. Change forest into rubber plantations weakened the soil function as CH4 sink.

Wet periods in northeastern Brazil over the past 210 kyr linked to distant climate anomalies.

PubMed

Wang, Xianfeng; Auler, Augusto S; Edwards, R Lawrence; Cheng, Hai; Cristalli, Patricia S; Smart, Peter L; Richards, David A; Shen, Chuan-Chou

2004-12-09

The tropics are the main source of the atmosphere's sensible and latent heat, and water vapour, and are therefore important for reconstructions of past climate. But long, accurately dated records of southern tropical palaeoclimate, which would allow the establishment of climatic connections to distant regions, have not been available. Here we present a 210,000-year (210-kyr) record of wet periods in tropical northeastern Brazil--a region that is currently semi-arid. The record is obtained from speleothems and travertine deposits that are accurately dated using the U/Th method. We find wet periods that are synchronous with periods of weak East Asian summer monsoons, cold periods in Greenland, Heinrich events in the North Atlantic and periods of decreased river runoff to the Cariaco basin. We infer that the wet periods may be explained with a southward displacement of the Intertropical Convergence Zone. This widespread synchroneity of climate anomalies suggests a relatively rapid global reorganization of the ocean-atmosphere system. We conclude that the wet periods probably affected rainforest distribution, as plant fossils show that forest expansion occurred during these intermittent wet intervals, and opened a forest corridor between the Amazonian and Atlantic rainforests.

Vegetation changes along gradients of long-term soil development in the Hawaiian montane rainforest zone11-219.

Treesearch

Kanehiro Kitayama; Dieter Mueller-Dombois

1995-01-01

The development of the Hawaiian montane rainforest was investigated along a 4.1-million-year soil age gradient at 1200 m elevation under two levels of precipitation, the mesic (c. 2500 mm annual rainfall) vs. wet (> 4000 mm)age gradient. Earlier analyses suggested that soil fertility and foliar nutrient concentrations of common canopy species changed unimodally on...

Holocene rain-forest wilderness: a neotropical perspective on humans as an exotic, invasive species

Treesearch

Robert L. Sanford; Sally P. Horn

2000-01-01

Large areas of lowland tropical rain-forests in the neotropics have been burned over the past 6,000 years, mostly by pre-Colombian agriculturists. This paper presents additional evidence of fires and other human impacts in neotropical forests, and considers the opportunities and limitations of different approaches to determining past land-use “signatures.” Knowledge of...

Science, Technology, and the Quest for International Influence

DTIC Science & Technology

2009-09-01

accept technical arguments on sensitive issues like protection of the Amazon rainforest . In 2009, non- governmental organizations, a primary channel of...biodiversity in the Amazon , or petroleum in the pre-salt layer off Brazil‘s coast complicated matters. After all, Richard Feynman, before visiting...defended its sovereign right to utilize its natural resources, including its enormous tropical rainforest , for natural development.79 Even as Brazil

Holocene soil-geomorphic surfaces influence the role of salmon-derived nutrients in the coastal temperate rainforest of Southeast Alaska

Treesearch

David V. D' Amore; Nicholas S. Bonzey; Jacob Berkowitz; Janine Rüegg; Scott Bridgham

2011-01-01

The influence of salmon-derived nutrients (SDN) is widely accepted as a potential factor in the maintenance of aquatic and terrestrial productivity in North American Coastal rainforests. Holocene alluvial landforms are intimately connected with the return of anadromous salmon, but the influence of the soils that occupy these landforms and support this important...

Post-Hurricane Successional Dynamics in Abundance and Diversity of Canopy Arthropods in a Tropical Rainforest

Treesearch

T. D. Schowalter; M. R. Willig; S. J. Presley

2017-01-01

We quantified long-term successional trajectories of canopy arthropods on six tree species in a tropical rainforest ecosystem in the Luquillo Mountains of Puerto Rico that experienced repeated hurricane-induced disturbances during the 19-yr study (1991–2009). We expected: 1) differential performances of arthropod species to result in taxon- or guild-specific responses...

Evidence of climate change impact on stream low flow from the tropical mountain rainforest watershed in Hainan Island, China

Treesearch

Z. Zhou; Y. Ouyang; Z. Qiu; G. Zhou; M. Lin; Y. Li

2017-01-01

Stream low flow estimates are central to assessing climate change impact, water resource management, and ecosystem restoration. This study investigated the impacts of climate change upon stream low flows from a rainforest watershed in Jianfengling (JFL) Mountain, Hainan Island, China, using the low flow selection method as well as the frequency and probability analysis...

Forest dynamics in the temperate rainforests of Alaska: from individual tree to regional scales

Treesearch

Tara M. Barrett

2015-01-01

Analysis of remeasurement data from 1079 Forest Inventory and Analysis (FIA) plots revealed multi-scale change occurring in the temperate rainforests of southeast Alaska. In the western half of the region, including Prince William Sound, aboveground live tree biomass and carbon are increasing at a rate of 8 ( ± 2 ) percent per decade, driven by an increase in Sitka...

Understory fern community structure, growth and spore production responses to a large-scale hurricane experiment in a Puerto Rico rainforest

Treesearch

Joanne M. Sharpe; Aaron B. Shiels

2014-01-01

Ferns are abundant in most rainforest understories yet their responses to hurricanes have not been well studied. Fern community structure, growth and spore production were monitored for two years before and five years after a large-scale experiment that simulated two key components of severe hurricane disturbance: canopy openness and debris deposition. The canopy was...

Adult Learning in New Social Movements: Environmental Protest and the Struggle for the Clayoquot Sound Rainforest

ERIC Educational Resources Information Center

Walter, Pierre

2007-01-01

During the summer of 1993, some 10,000 people, young and old, joined logging road blockades to protest the clear-cutting of old-growth temperate rainforest in Clayoquot Sound, British Columbia, Canada. By the end of the summer, more than 900 protestors had been arrested for acts of civil disobedience in refusing to leave the road. In subsequent…

Old Groundwater, Interbasin Groundwater Flow, Magmatic Solutes, and Hydrologic Fluxes of Carbon in a Lowland Costa Rican Rainforest

NASA Astrophysics Data System (ADS)

Genereux, D. P.; Webb, M.; Solomon, D. K.

2009-04-01

Carbon (C), helium (He), and chloride (Cl) concentrations and isotopes were measured in groundwater and surface-water in a lowland Costa Rican rainforest at the foot of Volcan Barva (a 2900 m peak that is one of the largest in the Cordillera Central of Costa Rica). Results are consistent with the presence and mixing of two distinct groundwaters: (1) high-solute bedrock groundwater representing interbasin groundwater flow (IGF) into the rainforest watersheds, and (2) low-solute local groundwater recharged within the lowland rainforest watersheds. In bedrock groundwater, high ^13C (-4.89 o/oo), low 14C (7.98 pmC), high R/RA for He (6.88), and low 36Cl/Cl (17x10-15) suggest that elevated DIC, He, and Cl concentrations are derived from magmatic outgassing and/or weathering of volcanic rock beneath nearby Volcan Barva. In local groundwater, the magmatic signature is absent and data suggest atmospheric sources for He and Cl and a biogenic soil-gas CO2 source for DIC. 14C dating suggests the age of bedrock groundwater is 2700-4300 years (most likely at the lower end of the range). Local groundwater has 14C>100 pmC, indicating the presence of "bomb carbon" and thus ages less than ~50 years for these samples collected in 2006. Overall, the C, He, and Cl data are consistent with a prior conceptual hydrologic model developed with major ion and water-balance data from this tropical rainforest: (1) the large variation in solute concentrations can be explained by mixing of the two distinct groundwaters, (2) bedrock groundwater is much older than local water, (3) elevated solute concentrations in bedrock groundwater are derived from volcanic fluids and/or rock, and (4) local water has not had significant interaction with volcanic rock. Tracers with different behaviors and capabilities converge on the same hydrologic interpretation. Also, transport of magmatic CO2 into the lowland rainforest (as DIC in the IGF) seems to be significant relative to other large ecosystem-level carbon fluxes. Dissolved carbon export from the watersheds via streamflow is dominated by DIC (DOC accounts for

Effects of growth form and functional traits on response of woody plants to clearing and fragmentation of subtropical rainforest.

PubMed

Kooyman, R M; Zanne, A E; Gallagher, R V; Cornwell, W; Rossetto, M; O'Connor, P; Parkes, E A; Catterall, C F; Laffan, S W; Lusk, C H

2013-12-01

The conservation implications of large-scale rainforest clearing and fragmentation on the persistence of functional and taxonomic diversity remain poorly understood. If traits represent adaptive strategies of plant species to particular circumstances, the expectation is that the effect of forest clearing and fragmentation will be affected by species functional traits, particularly those related to dispersal. We used species occurrence data for woody plants in 46 rainforest patches across 75,000 ha largely cleared of forest by the early 1900s to determine the combined effects of area reduction, fragmentation, and patch size on the taxonomic structure and functional diversity of subtropical rainforest. We compiled species trait values for leaf area, seed dry mass, wood density, and maximum height and calculated species niche breadths. Taxonomic structure, trait values (means, ranges), and the functional diversity of assemblages of climbing and free-standing plants in remnant patches were quantified. Larger rainforest patches had higher species richness. Species in smaller patches were taxonomically less related than species in larger patches. Free-standing plants had a high percentage of frugivore dispersed seeds; climbers had a high proportion of small wind-dispersed seeds. Connections between the patchy spatial distribution of free-standing species, larger seed sizes, and dispersal syndrome were weak. Assemblages of free-standing plants in patches showed more taxonomic and spatial structuring than climbing plants. Smaller isolated patches retained relatively high functional diversity and similar taxonomic structure to larger tracts of forest despite lower species richness. The response of woody plants to clearing and fragmentation of subtropical rainforest differed between climbers and slow-growing mature-phase forest trees but not between climbers and pioneer trees. Quantifying taxonomic structure and functional diversity provides an improved basis for conservation planning and management by elucidating the effects of forest-area reduction and fragmentation. Efectos de la Forma de Crecimiento y Atributos Funcionales en la Respuesta de Plantas Leñosas al Desmonte y Fragmentación de Bosque Lluvioso Subtropical. © 2013 Society for Conservation Biology.

Too young for rainforests? The impact of a rainforest curriculum on elementary students' affective responses to nature

NASA Astrophysics Data System (ADS)

Matteson, Kathryn Alice

A theory relating to children's affective responses to education about large-scale, distant environmental issues has become fairly widely accepted among environmental educators. The theory is encapsulated in the term "ecophobia," coined by David Sobel in Beyond Ecophobia (1996). According to this notion, elementary school children may become fearful of, or dissociated from, nature as they receive little direct exposure to nature and as they learn about distant environmental issues such as rainforest depletion. However, this seems a conflation of two discrete factors (lack of exposure to nature and education about distant environmental issues) that should be examined separately. Although children's exposure to nature has been studied, there appears to be no scientific research that examines elementary school students' affective responses to nature following education about distant environmental issues. This study endeavors to fill the apparent gap by measuring 4th graders' affective responses to nature following a unit on tropical rainforests. Deforestation represents a "distant" environmental issue that is thought to cause fear of, or dissociation from, nature among elementary school students. This quasi-experimental study involved a pretest, a posttest, and 150 4th grade participants in 8 classes. Students in all eight classes were administered a pretest questionnaire, inquiring about their affective responses to nature. Four classes then underwent a week-long unit on rainforests while four control group classes did not. All eight classes were then administered a posttest questionnaire. The data did not support the hypotheses that participants would feel more appreciative of nature and more empowered to protect nature following the rainforest unit. However, the data do support the hypotheses that the unit would not cause participants to feel increased fear of or dissociation from, nature. The data also suggest that greater amounts of time spent in nature were associated with greater appreciation of nature and less fear of nature. This research represents an initial effort to understand the developmental appropriateness of educating elementary school students about distant environmental issues. Further research on this topic is needed.

Origin of the Hawaiian rainforest and its transition states in long-term primary succession

NASA Astrophysics Data System (ADS)

Mueller-Dombois, D.; Boehmer, H. J.

2013-07-01

This paper addresses the question of transition states in the Hawaiian rainforest ecosystem with emphasis on their initial developments. Born among volcanoes in the north central Pacific about 4 million years ago, the Hawaiian rainforest became assembled from spores of algae, fungi, lichens, bryophytes, ferns and from seeds of about 275 flowering plants that over the millennia evolved into ca. 1000 endemic species. Outstanding among the forest builders were the tree ferns (Cibotium spp.) and the 'ōhi'a lehua trees (Metrosideros spp.), which still dominate the Hawaiian rainforest ecosystem today. The structure of this forest is simple. The canopy in closed mature rainforests is dominated by cohorts of Metrosideros polymorpha and the undergrowth by tree fern species of Cibotium. When a new lava flow cuts through this forest, kipuka are formed, i.e., islands of remnant vegetation. On the new volcanic substrate, the assemblage of plant life forms is similar to the assemblage during the evolution of this system. In open juvenile forests, a mat-forming fern, the uluhe fern (Dicranopteris linearis), becomes established. It inhibits further regeneration of the dominant 'ōhi'a tree, thereby reinforcing the cohort structure of the canopy guild. In the later part of its life cycle, the canopy guild breaks down often in synchrony. The trigger is hypothesized to be a climatic perturbation. After the disturbance, the forest becomes reestablished in about 30-40 yr. As the volcanic surfaces age, they go from a mesotrophic to a eutrophic phase, reaching a biophilic nutrient climax by about 1-25 K yr. Thereafter, a regressive oligotrophic phase follows; the soils become exhausted of nutrients. The shield volcanoes break down. Marginally, forest habitats change into bogs and stream ecosystems. The broader 'ōhi'a rainforest redeveloping in the more dissected landscapes of the older islands loses stature, often forming large gaps that are invaded by the aluminum tolerant uluhe fern. The 'ōhi'a trees still thrive on soils rejuvenated from landslides and from Asian dust on the oldest (5 million years old) island Kaua'i but their stature and living biomass is greatly diminished.

Refugial isolation and divergence in the Narrowheaded Gartersnake species complex (Thamnophis rufipunctatus) as revealed by multilocus DNA sequence data

USGS Publications Warehouse

Wood, Dustin A.; Vandergast, A.G.; Espinal, A. Lemos; Fisher, R.N.; Holycross, A.T.

2011-01-01

Glacial–interglacial cycles of the Pleistocene are hypothesized as one of the foremost contributors to biological diversification. This is especially true for cold-adapted montane species, where range shifts have had a pronounced effect on population-level divergence. Gartersnakes of the Thamnophis rufipunctatus species complex are restricted to cold headwater streams in the highlands of the Sierra Madre Occidental and southwestern USA. We used coalescent and multilocus phylogenetic approaches to test whether genetic diversification of this montane-restricted species complex is consistent with two prevailing models of range fluctuation for species affected by Pleistocene climate changes. Our concatenated nuDNA and multilocus species analyses recovered evidence for the persistence of multiple lineages that are restricted geographically, despite a mtDNA signature consistent with either more recent connectivity (and introgression) or recent expansion (and incomplete lineage sorting). Divergence times estimated using a relaxed molecular clock and fossil calibrations fall within the Late Pleistocene, and zero gene flow scenarios among current geographically isolated lineages could not be rejected. These results suggest that increased climate shifts in the Late Pleistocene have driven diversification and current range retraction patterns and that the differences between markers reflect the stochasticity of gene lineages (i.e. ancestral polymorphism) rather than gene flow and introgression. These results have important implications for the conservation of T. rufipunctatus (sensu novo), which is restricted to two drainage systems in the southwestern US and has undergone a recent and dramatic decline.

Trophic niches, diversity and community composition of invertebrate top predators (Chilopoda) as affected by conversion of tropical lowland rainforest in Sumatra (Indonesia).

PubMed

Klarner, Bernhard; Winkelmann, Helge; Krashevska, Valentyna; Maraun, Mark; Widyastuti, Rahayu; Scheu, Stefan

2017-01-01

Conversion of tropical rainforests into plantations fundamentally alters ecological niches of animal species. Generalist predators such as centipedes (Chilopoda) may be able to persist in converted ecosystems due to their ability to adapt and switch to alternative prey populations. We investigated variations in community composition and trophic niches of soil and litter living centipedes in a range of ecosystems including rainforests, jungle rubber agroforests, and rubber and oil palm monocultures in two landscapes in Sumatra, Indonesia. Including information on environmental factors in the soil and litter habitat, we explored drivers shaping ecological niches of soil living invertebrate predators in one of the world's hotspots of rainforest conversion. Conversion of rainforests into agroforests and plantations was associated with a marked change in the composition of centipede communities. However, irrespective of major differences in habitat characteristics, changes in total abundances were small and the overall diversity and biomass of centipedes was similar in each of the systems investigated, suggesting that the number of ecological niches for this group of predators remains unchanged. By using stable isotope analysis (15N and 13C), we investigated trophic niche shifts of the centipede community; lower δ13C values of centipedes in oil palm plantations as compared to other ecosystems suggests that centipedes switch from decomposer prey to other prey, presumably understory associated herbivores, due to reduced availability of litter associated prey species. The results suggest that the ability to utilize alternative prey is a key feature enabling invertebrate predators to persist in ecosystems undergoing major structural changes due to anthropogenic land use change.

Epidemiology of Rickettsia sp. strain Atlantic rainforest in a spotted fever-endemic area of southern Brazil.

PubMed

Barbieri, Amalia R M; Filho, Jonas M; Nieri-Bastos, Fernanda A; Souza, Julio C; Szabó, Matias P J; Labruna, Marcelo B

2014-10-01

The present study was performed in Vila Itoupava, an area of the state of Santa Catarina, southern Brazil, in which a tick-borne spotted fever illness has been endemic since 2003. Notably, both the etiological agent and the vector of these spotted fever cases remain unknown. During January 2011, humans, domestic dogs, and their ticks were sampled in households that are typically surrounded by highly preserved Atlantic rainforest fragments. Ticks collected from dogs were Amblyomma ovale (34% prevalence), Amblyomma aureolatum (18.9%), and Rhipicephalus sanguineus (3.8%). A total of 7.8% (6/77) A. ovale and 9.3% (4/43) A. aureolatum were infected by Rickettsia sp. strain Atlantic rainforest, a Rickettsia parkeri-like agent recently shown to cause spotted fever illness in southeastern Brazil. Overall, 67.3% (35/52) of the dogs were seroreactive to spotted fever group rickettsiae, mostly with highest endpoint titers to R. parkeri. Among humans, 46.7% (7/15) reacted serologically to rickettsiae at low to moderate endpoint titers. Because canine seroreactivity to R. parkeri was strongly associated with frequent contact with forests (the preferred habitat for A. ovale and A. aureolatum), it is concluded that sampled dogs have been infected by strain Atlantic rainforest through the parasitism of these tick species. The present study provides epidemiological evidence that the spotted fever in the study area has been caused by Rickettsia sp. strain Atlantic rainforest, transmitted to humans by either A. ovale or A. aureolatum. Further studies encompassing direct diagnostic methods on clinical specimens from patients are needed to confirm the above epidemiological evidence. Copyright © 2014 Elsevier GmbH. All rights reserved.

Trophic niches, diversity and community composition of invertebrate top predators (Chilopoda) as affected by conversion of tropical lowland rainforest in Sumatra (Indonesia)

PubMed Central

Winkelmann, Helge; Krashevska, Valentyna; Maraun, Mark; Widyastuti, Rahayu; Scheu, Stefan

2017-01-01

Conversion of tropical rainforests into plantations fundamentally alters ecological niches of animal species. Generalist predators such as centipedes (Chilopoda) may be able to persist in converted ecosystems due to their ability to adapt and switch to alternative prey populations. We investigated variations in community composition and trophic niches of soil and litter living centipedes in a range of ecosystems including rainforests, jungle rubber agroforests, and rubber and oil palm monocultures in two landscapes in Sumatra, Indonesia. Including information on environmental factors in the soil and litter habitat, we explored drivers shaping ecological niches of soil living invertebrate predators in one of the world’s hotspots of rainforest conversion. Conversion of rainforests into agroforests and plantations was associated with a marked change in the composition of centipede communities. However, irrespective of major differences in habitat characteristics, changes in total abundances were small and the overall diversity and biomass of centipedes was similar in each of the systems investigated, suggesting that the number of ecological niches for this group of predators remains unchanged. By using stable isotope analysis (15N and 13C), we investigated trophic niche shifts of the centipede community; lower δ13C values of centipedes in oil palm plantations as compared to other ecosystems suggests that centipedes switch from decomposer prey to other prey, presumably understory associated herbivores, due to reduced availability of litter associated prey species. The results suggest that the ability to utilize alternative prey is a key feature enabling invertebrate predators to persist in ecosystems undergoing major structural changes due to anthropogenic land use change. PMID:28763453

Mosquito communities and disease risk influenced by land use change and seasonality in the Australian tropics.

PubMed

Meyer Steiger, Dagmar B; Ritchie, Scott A; Laurance, Susan G W

2016-07-07

Anthropogenic land use changes have contributed considerably to the rise of emerging and re-emerging mosquito-borne diseases. These diseases appear to be increasing as a result of the novel juxtapositions of habitats and species that can result in new interchanges of vectors, diseases and hosts. We studied whether the mosquito community structure varied between habitats and seasons and whether known disease vectors displayed habitat preferences in tropical Australia. Using CDC model 512 traps, adult mosquitoes were sampled across an anthropogenic disturbance gradient of grassland, rainforest edge and rainforest interior habitats, in both the wet and dry seasons. Nonmetric multidimensional scaling (NMS) ordinations were applied to examine major gradients in the composition of mosquito and vector communities. We captured ~13,000 mosquitoes from 288 trap nights across four study sites. A community analysis identified 29 species from 7 genera. Even though mosquito abundance and richness were similar between the three habitats, the community composition varied significantly in response to habitat type. The mosquito community in rainforest interiors was distinctly different to the community in grasslands, whereas forest edges acted as an ecotone with shared communities from both forest interiors and grasslands. We found two community patterns that will influence disease risk at out study sites, first, that disease vectoring mosquito species occurred all year round. Secondly, that anthropogenic grasslands adjacent to rainforests may increase the probability of novel disease transmission through changes to the vector community on rainforest edges, as most disease transmitting species predominantly occurred in grasslands. Our results indicate that the strong influence of anthropogenic land use change on mosquito communities could have potential implications for pathogen transmission to humans and wildlife.

Loss of frugivore seed dispersal services under climate change.

PubMed

Mokany, Karel; Prasad, Soumya; Westcott, David A

2014-05-27

The capacity of species to track shifting climates into the future will strongly influence outcomes for biodiversity under a rapidly changing climate. However, we know remarkably little about the dispersal abilities of most species and how these may be influenced by climate change. Here we show that climate change is projected to substantially reduce the seed dispersal services provided by frugivorous vertebrates in rainforests across the Australian Wet Tropics. Our model projections show reductions in both median and long-distance seed dispersal, which may markedly reduce the capacity of many rainforest plant species to track shifts in suitable habitat under climate change. However, our analyses suggest that active management to maintain the abundances of a small set of important frugivores under climate change could markedly reduce the projected loss of seed dispersal services and facilitate shifting distributions of rainforest plant species.

Global Physiographic and Climatic Maps to Support Revision of Environmental Testing Guidelines

DTIC Science & Technology

2009-07-06

precipitation and boarded by High and Low Relief Mountains or Interior Plains and Plateaus, such as the Amazon River Basin in South America and the Congo...taxonomy system. These form in hot climates with continual moisture availability, typically thought to occur only beneath tropical rainforests , though...Montane Tropical Forest Tropical Degraded Forest Seasonal Tropical Forest Rain Green Tropical Forest Tropical Rainforest FIGURE 6-1 DATE: 6-02

Long-term landscape change and bird abundance in Amazonian rainforest fragments.

PubMed

Stouffer, Philip C; Bierregaard, Richard O; Strong, Cheryl; Lovejoy, Thomas E

2006-08-01

The rainforests of the Amazon basin are being cut by humans at a rate >20,000 km2/year leading to smaller and more isolated patches of forest, with remaining fragments often in the range of 1-100 ha. We analyzed samples of understory birds collected over 20 years from a standardized mist-netting program in 1- to 100-ha rainforest fragments in a dynamic Amazonian landscape near Manaus, Brazil. Across bird guilds, the condition of second growth immediately surrounding fragments was often as important as fragment size or local forest cover in explaining variation in abundance. Some fragments surrounded by 100 m of open pasture showed reductions in insectivorous bird abundance of over 95%, even in landscapes dominated by continuous forest and old second growth. These extreme reductions may be typical throughout Amazonia in small (< or =10 ha), isolated fragments of rainforest. Abundance for some guilds returned to preisolation levels in 10- and 100-ha fragments connected to continuous forest by 20-year-old second growth. Our results show that the consequences of Amazonian forest loss cannot be accurately described without explicit consideration of vegetation dynamics in matrix habitat. Any dichotomous classification of the landscape into 'forest" and "nonforest" misses essential information about the matrix.

Conversion of Amazon rainforest to agriculture alters community traits of methane-cycling organisms.

PubMed

Meyer, Kyle M; Klein, Ann M; Rodrigues, Jorge L M; Nüsslein, Klaus; Tringe, Susannah G; Mirza, Babur S; Tiedje, James M; Bohannan, Brendan J M

2017-03-01

Land use change is one of the greatest environmental impacts worldwide, especially to tropical forests. The Amazon rainforest has been subject to particularly high rates of land use change, primarily to cattle pasture. A commonly observed response to cattle pasture establishment in the Amazon is the conversion of soil from a methane sink in rainforest, to a methane source in pasture. However, it is not known how the microorganisms that mediate methane flux are altered by land use change. Here, we use the deepest metagenomic sequencing of Amazonian soil to date to investigate differences in methane-cycling microorganisms and their traits across rainforest and cattle pasture soils. We found that methane-cycling microorganisms responded to land use change, with the strongest responses exhibited by methane-consuming, rather than methane-producing, microorganisms. These responses included a reduction in the relative abundance of methanotrophs and a significant decrease in the abundance of genes encoding particulate methane monooxygenase. We also observed compositional changes to methanotroph and methanogen communities as well as changes to methanotroph life history strategies. Our observations suggest that methane-cycling microorganisms are vulnerable to land use change, and this vulnerability may underlie the response of methane flux to land use change in Amazon soils. © 2017 John Wiley & Sons Ltd.

Photosynthetic temperature responses of tree species in Rwanda: evidence of pronounced negative effects of high temperature in montane rainforest climax species.

PubMed

Vårhammar, Angelica; Wallin, Göran; McLean, Christopher M; Dusenge, Mirindi Eric; Medlyn, Belinda E; Hasper, Thomas B; Nsabimana, Donat; Uddling, Johan

2015-05-01

The sensitivity of photosynthetic metabolism to temperature has been identified as a key uncertainty for projecting the magnitude of the terrestrial feedback on future climate change. While temperature responses of photosynthetic capacities have been comparatively well investigated in temperate species, the responses of tropical tree species remain unexplored. We compared the responses of seedlings of native cold-adapted tropical montane rainforest tree species with those of exotic warm-adapted plantation species, all growing in an intermediate temperature common garden in Rwanda. Leaf gas exchange responses to carbon dioxide (CO2 ) at different temperatures (20-40°C) were used to assess the temperature responses of biochemical photosynthetic capacities. Analyses revealed a lower optimum temperature for photosynthetic electron transport rates than for Rubisco carboxylation rates, along with lower electron transport optima in the native cold-adapted than in the exotic warm-adapted species. The photosynthetic optimum temperatures were generally exceeded by daytime peak leaf temperatures, in particular in the native montane rainforest climax species. This study thus provides evidence of pronounced negative effects of high temperature in tropical trees and indicates high susceptibility of montane rainforest climax species to future global warming. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Linking biogenic hydrocarbons to biogenic aerosol in the Borneo rainforest

NASA Astrophysics Data System (ADS)

Hamilton, J. F.; Alfarra, M. R.; Robinson, N.; Ward, M. W.; Lewis, A. C.; McFiggans, G. B.; Coe, H.; Allan, J. D.

2013-11-01

Emissions of biogenic volatile organic compounds are though to contribute significantly to secondary organic aerosol formation in the tropics, but understanding these transformation processes has proved difficult, due to the complexity of the chemistry involved and very low concentrations. Aerosols from above a Southeast Asian tropical rainforest in Borneo were characterised using liquid chromatography-ion trap mass spectrometry, high-resolution aerosol mass spectrometry and Fourier transform ion cyclotron resonance mass spectrometry (FTICRMS) techniques. Oxygenated compounds were identified in ambient organic aerosol that could be directly traced back to isoprene, monoterpenes and sesquiterpene emissions, by combining field data on chemical structures with mass spectral data generated from synthetically produced products created in a simulation chamber. Eighteen oxygenated species of biogenic origin were identified in the rainforest aerosol from the precursors isoprene, α-pinene, limonene, α-terpinene and β-caryophyllene. The observations provide the unambiguous field detection of monoterpene and sesquiterpene oxidation products in SOA above a pristine tropical rainforest. The presence of 2-methyl tetrol organosulfates and an associated sulfated dimer provides direct evidence that isoprene in the presence of sulfate aerosol can make a contribution to biogenic organic aerosol above tropical forests. High-resolution mass spectrometry indicates that sulfur can also be incorporated into oxidation products arising from monoterpene precursors in tropical aerosol.

Linking biogenic hydrocarbons to biogenic aerosol in the Borneo rainforest

NASA Astrophysics Data System (ADS)

Hamilton, J. F.; Alfarra, M. R.; Robinson, N.; Ward, M. W.; Lewis, A. C.; McFiggans, G. B.; Coe, H.; Allan, J. D.

2013-07-01

Emissions of biogenic volatile organic compounds are though to contribute significantly to secondary organic aerosol formation in the tropics, but understanding the process of these transformations has proved difficult, due to the complexity of the chemistry involved and very low concentrations. Aerosols from above a South East Asian tropical rainforest in Borneo were characterised using liquid chromatography-ion trap mass spectrometry, high resolution aerosol mass spectrometry and fourier transform ion cyclotron resonance mass spectrometry (FTICRMS) techniques. Oxygenated compounds were identified in ambient organic aerosol that could be directly traced back to isoprene, monoterpenes and sesquiterpene emissions, by combining field data on chemical structures with mass spectral data generated from synthetically produced products created in a simulation chamber. Eighteen oxygenated species of biogenic origin were identified in the rainforest aerosol from the precursors isoprene, α-pinene, limonene, α-terpinene and β-caryophyllene. The observations provide the unambiguous field detection of monoterpene and sesquiterpene oxidation products in SOA above a pristine tropical rainforest. The presence of 2-methyltetrol organosulfates and an associated sulfated dimer provides direct evidence that isoprene in the presence of sulfate aerosol can make a contribution to biogenic organic aerosol above tropical forests. High-resolution mass spectrometry indicates that sulfur can also be incorporated into oxidation products arising from monoterpene precursors in tropical aerosol.

Converging migration routes of Eurasian hobbies Falco subbuteo crossing the African equatorial rain forest.

PubMed

Strandberg, Roine; Klaassen, Raymond H G; Hake, Mikael; Olofsson, Patrik; Alerstam, Thomas

2009-02-22

Autumn migration of adult Eurasian hobbies Falco subbuteo from Europe to southern Africa was recorded by satellite telemetry and observed routes were compared with randomly simulated routes. Two non-random features of observed routes were revealed: (i) shifts to more westerly longitudes than straight paths to destinations and (ii) strong route convergence towards a restricted area close to the equator (1 degree S, 15 degrees E). The birds migrated south or southwest to approximately 10 degrees N, where they changed to south-easterly courses. The maximal spread between routes at 10 degrees N (2134 km) rapidly decreased to a minimum (67 km) close to the equator. We found a striking relationship between the route convergence and the distribution of continuous rainforest, suggesting that hobbies minimize flight distance across the forest, concentrating in a corridor where habitat may be more suitable for travelling and foraging. With rainforest forming a possible ecological barrier, many migrants may cross the equator either at 15 degrees E, similar to the hobbies, or at 30-40 degrees E, east of the rainforest where large-scale migration is well documented. Much remains to be understood about the role of the rainforest for the evolution and future of the trans-equatorial Palaearctic-African bird migration systems.

Neoendemism in Madagascan scaly tree ferns results from recent, coincident diversification bursts.

PubMed

Janssen, Thomas; Bystriakova, Nadia; Rakotondrainibe, France; Coomes, David; Labat, Jean-Noël; Schneider, Harald

2008-08-01

More than 80% of Madagascar's 12,000 plant species are endemic with the degree of endemism reaching as much as 95% in the scaly tree ferns, an important species rich component of Madagascar's evergreen rainforests. Predominantly African or Asian ancestry and divergence times usually postdating the separation of Madagascar from the Gondwanan landmasses have been demonstrated for several Madagascan animal and angiosperm groups. However, evolutionary studies of rainforest-specific lineages are scarce and the ecological context of radiation events has rarely been investigated. Here, we examine the evolution of Madagascan tree ferns as a rainforest-specific model family, integrate results from bioclimatic niche analysis with a dated phylogenetic framework, and propose an evolutionary scenario casting new light on our knowledge of the evolution of large island endemic clades. We show that Madagascar's extant tree fern diversity springs from three distinct ancestors independently colonizing Madagascar in the Miocene and that these three monophyletic clades diversified in three coincident radiation bursts during the Pliocene, reaching exceptionally high diversification rates and most likely responding to a common climatic trigger. Recent diversification bursts may thus have played a major role in the evolution of the extant Madagascan rainforest biome, which hence contains a significant number of young, neoendemic taxa.

A test of alternative models of diversification in tropical rainforests: Ecological gradients vs. rainforest refugia

PubMed Central

Schneider, Christopher J.; Smith, Thomas B.; Larison, Brenda; Moritz, Craig

1999-01-01

Comparison of mitochondrial and morphological divergence in eight populations of a widespread leaf-litter skink is used to determine the relative importance of geographic isolation and natural selection in generating phenotypic diversity in the Wet Tropics Rainforest region of Australia. The populations occur in two geographically isolated regions, and within each region, in two different habitats (closed rainforest and tall open forest) that span a well characterized ecological gradient. Morphological differences among ancient geographic isolates (separated for several million years, judging by their mitochondrial DNA sequence divergence) were slight, but morphological and life history differences among habitats were large and occurred despite moderate to high levels of mitochondrial gene flow. A field experiment identified avian predation as one potential agent of natural selection. These results indicate that natural selection operating across ecological gradients can be more important than geographic isolation in similar habitats in generating phenotypic diversity. In addition, our results indicate that selection is sufficiently strong to overcome the homogenizing effects of gene flow, a necessary first step toward speciation in continuously distributed populations. Because ecological gradients may be a source of evolutionary novelty, and perhaps new species, their conservation warrants greater attention. This is particularly true in tropical regions, where most reserves do not include ecological gradients and transitional habitats. PMID:10570165

Tropical rainforests dominate multi-decadal variability of the global carbon cycle

NASA Astrophysics Data System (ADS)

Zhang, X.; Wang, Y. P.; Peng, S.; Rayner, P. J.; Silver, J.; Ciais, P.; Piao, S.; Zhu, Z.; Lu, X.; Zheng, X.

2017-12-01

Recent studies find that inter-annual variability of global atmosphere-to-land CO2 uptake (NBP) is dominated by semi-arid ecosystems. However, the NBP variations at decadal to multi-decadal timescales are still not known. By developing a basic theory for the role of net primary production (NPP) and heterotrophic respiration (Rh) on NBP and applying it to 100-year simulations of terrestrial ecosystem models forced by observational climate, we find that tropical rainforests dominate the multi-decadal variability of global NBP (48%) rather than the semi-arid lands (35%). The NBP variation at inter-annual timescales is almost 90% contributed by NPP, but across longer timescales is progressively controlled by Rh that constitutes the response from the NPP-derived soil carbon input (40%) and the response of soil carbon turnover rates to climate variability (60%). The NBP variations of tropical rainforests is modulated by the ENSO and the PDO through their significant influences on temperature and precipitation at timescales of 2.5-7 and 25-50 years, respectively. This study highlights the importance of tropical rainforests on the multi-decadal variability of global carbon cycle, suggesting that we need to carefully differentiate the effect of NBP long-term fluctuations associated with ocean-related climate modes on the long-term trend in land sink.

Tropical rainforests that persisted: inferences from the Quaternary demographic history of eight tree species in the Guiana shield.

PubMed

Barthe, Stéphanie; Binelli, Giorgio; Hérault, Bruno; Scotti-Saintagne, Caroline; Sabatier, Daniel; Scotti, Ivan

2017-02-01

How Quaternary climatic and geological disturbances influenced the composition of Neotropical forests is hotly debated. Rainfall and temperature changes during and/or immediately after the last glacial maximum (LGM) are thought to have strongly affected the geographical distribution and local abundance of tree species. The paucity of the fossil records in Neotropical forests prevents a direct reconstruction of such processes. To describe community-level historical trends in forest composition, we turned therefore to inferential methods based on the reconstruction of past demographic changes. In particular, we modelled the history of rainforests in the eastern Guiana Shield over a timescale of several thousand generations, through the application of approximate Bayesian computation and maximum-likelihood methods to diversity data at nuclear and chloroplast loci in eight species or subspecies of rainforest trees. Depending on the species and on the method applied, we detected population contraction, expansion or stability, with a general trend in favour of stability or expansion, with changes presumably having occurred during or after the LGM. These findings suggest that Guiana Shield rainforests have globally persisted, while expanding, through the Quaternary, but that different species have experienced different demographic events, with a trend towards the increase in frequency of light-demanding, disturbance-associated species. © 2016 John Wiley & Sons Ltd.

Arctic biodiversity: Increasing richness accompanies shrinking refugia for a cold-associated tundra fauna

USGS Publications Warehouse

Hope, Andrew G.; Waltari, Eric; Malaney, Jason L.; Payer, David C.; Cook, J.A.; Talbot, Sandra L.

2015-01-01

As ancestral biodiversity responded dynamically to late-Quaternary climate changes, so are extant organisms responding to the warming trajectory of the Anthropocene. Ecological predictive modeling, statistical hypothesis tests, and genetic signatures of demographic change can provide a powerful integrated toolset for investigating these biodiversity responses to climate change, and relative resiliency across different communities. Within the biotic province of Beringia, we analyzed specimen localities and DNA sequences from 28 mammal species associated with boreal forest and Arctic tundra biomes to assess both historical distributional and evolutionary responses and then forecasted future changes based on statistical assessments of past and present trajectories, and quantified distributional and demographic changes in relation to major management regions within the study area. We addressed three sets of hypotheses associated with aspects of methodological, biological, and socio-political importance by asking (1) what is the consistency among implications of predicted changes based on the results of both ecological and evolutionary analyses; (2) what are the ecological and evolutionary implications of climate change considering either total regional diversity or distinct communities associated with major biomes; and (3) are there differences in management implications across regions? Our results indicate increasing Arctic richness through time that highlights a potential state shift across the Arctic landscape. However, within distinct ecological communities, we found a predicted decline in the range and effective population size of tundra species into several discrete refugial areas. Consistency in results based on a combination of both ecological and evolutionary approaches demonstrates increased statistical confidence by applying cross-discipline comparative analyses to conservation of biodiversity, particularly considering variable management regimes that seek to balance sustainable ecosystems with other anthropogenic values. Refugial areas for cold-adapted taxa appear to be persistent across both warm and cold climate phases and although fragmented, constitute vital regions for persistence of Arctic mammals.

A Complex System of Glacial Sub-Refugia Drives Endemic Freshwater Biodiversity on the Tibetan Plateau.

PubMed

Clewing, Catharina; Albrecht, Christian; Wilke, Thomas

2016-01-01

Although only relatively few freshwater invertebrate families are reported from the Tibetan Plateau, the degree of endemism may be high. Many endemic lineages occur within permafrost areas, raising questions about the existence of isolated intra-plateau glacial refugia. Moreover, if such refugia existed, it might be instructive to learn whether they were associated with lakes or with more dynamic ecosystems such as ponds, wetlands, or springs. To study these hypotheses, we used pulmonate snails of the plateau-wide distributed genus Radix as model group and the Lake Donggi Cona drainage system, located in the north-eastern part of the plateau, as model site. First, we performed plateau-wide phylogenetic analyses using mtDNA data to assess the overall relationships of Radix populations inhabiting the Lake Donggi Cona system for revealing refugial lineages. We then conducted regional phylogeographical analyses applying a combination of mtDNA and nuclear AFLP markers to infer the local structure and demographic history of the most abundant endemic Radix clade for identifying location and type of (sub-)refugia within the drainage system. Our phylogenetic analysis showed a high diversity of Radix lineages in the Lake Donggi Cona system. Subsequent phylogeographical analyses of the most abundant endemic clade indicated a habitat-related clustering of genotypes and several Late Pleistocene spatial/demographic expansion events. The most parsimonious explanation for these patterns would be a scenario of an intra-plateau glacial refugium in the Lake Donggi Cona drainage system, which might have consisted of isolated sub-refugia. Though the underlying processes remain unknown, an initial separation of lake and watershed populations could have been triggered by lake-level fluctuations before and during the Last Glacial Maximum. This study inferred the first intra-plateau refugium for freshwater animals on the Tibetan Plateau. It thus sheds new light on the evolutionary history of its endemic taxa and provides important insights into the complex refugial history of a high-altitude ecosystem.

Evolutionary refugia and ecological refuges: key concepts for conserving Australian arid zone freshwater biodiversity under climate change

PubMed Central

Davis, Jenny; Pavlova, Alexandra; Thompson, Ross; Sunnucks, Paul

2013-01-01

Refugia have been suggested as priority sites for conservation under climate change because of their ability to facilitate survival of biota under adverse conditions. Here, we review the likely role of refugial habitats in conserving freshwater biota in arid Australian aquatic systems where the major long-term climatic influence has been aridification. We introduce a conceptual model that characterizes evolutionary refugia and ecological refuges based on our review of the attributes of aquatic habitats and freshwater taxa (fishes and aquatic invertebrates) in arid Australia. We also identify methods of recognizing likely future refugia and approaches to assessing the vulnerability of arid-adapted freshwater biota to a warming and drying climate. Evolutionary refugia in arid areas are characterized as permanent, groundwater-dependent habitats (subterranean aquifers and springs) supporting vicariant relicts and short-range endemics. Ecological refuges can vary across space and time, depending on the dispersal abilities of aquatic taxa and the geographical proximity and hydrological connectivity of aquatic habitats. The most important are the perennial waterbodies (both groundwater and surface water fed) that support obligate aquatic organisms. These species will persist where suitable habitats are available and dispersal pathways are maintained. For very mobile species (invertebrates with an aerial dispersal phase) evolutionary refugia may also act as ecological refuges. Evolutionary refugia are likely future refugia because their water source (groundwater) is decoupled from local precipitation. However, their biota is extremely vulnerable to changes in local conditions because population extinction risks cannot be abated by the dispersal of individuals from other sites. Conservation planning must incorporate a high level of protection for aquifers that support refugial sites. Ecological refuges are vulnerable to changes in regional climate because they have little thermal or hydrological buffering. Accordingly, conservation planning must focus on maintaining meta-population processes, especially through dynamic connectivity between aquatic habitats at a landscape scale. PMID:23526791

Phylogeography and demographic history of Lacerta lepida in the Iberian Peninsula: multiple refugia, range expansions and secondary contact zones

PubMed Central

2011-01-01

Background The Iberian Peninsula is recognized as an important refugial area for species survival and diversification during the climatic cycles of the Quaternary. Recent phylogeographic studies have revealed Iberia as a complex of multiple refugia. However, most of these studies have focused either on species with narrow distributions within the region or species groups that, although widely distributed, generally have a genetic structure that relates to pre-Quaternary cladogenetic events. In this study we undertake a detailed phylogeographic analysis of the lizard species, Lacerta lepida, whose distribution encompasses the entire Iberian Peninsula. We attempt to identify refugial areas, recolonization routes, zones of secondary contact and date demographic events within this species. Results Results support the existence of 6 evolutionary lineages (phylogroups) with a strong association between genetic variation and geography, suggesting a history of allopatric divergence in different refugia. Diversification within phylogroups is concordant with the onset of the Pleistocene climatic oscillations. The southern regions of several phylogroups show a high incidence of ancestral alleles in contrast with high incidence of recently derived alleles in northern regions. All phylogroups show signs of recent demographic and spatial expansions. We have further identified several zones of secondary contact, with divergent mitochondrial haplotypes occurring in narrow zones of sympatry. Conclusions The concordant patterns of spatial and demographic expansions detected within phylogroups, together with the high incidence of ancestral haplotypes in southern regions of several phylogroups, suggests a pattern of contraction of populations into southern refugia during adverse climatic conditions from which subsequent northern expansions occurred. This study supports the emergent pattern of multiple refugia within Iberia but adds to it by identifying a pattern of refugia coincident with the southern distribution limits of individual evolutionary lineages. These areas are important in terms of long-term species persistence and therefore important areas for conservation. PMID:21682856

Phylogeography and demographic history of Lacerta lepida in the Iberian Peninsula: multiple refugia, range expansions and secondary contact zones.

PubMed

Miraldo, Andreia; Hewitt, Godfrey M; Paulo, Octavio S; Emerson, Brent C

2011-06-17

The Iberian Peninsula is recognized as an important refugial area for species survival and diversification during the climatic cycles of the Quaternary. Recent phylogeographic studies have revealed Iberia as a complex of multiple refugia. However, most of these studies have focused either on species with narrow distributions within the region or species groups that, although widely distributed, generally have a genetic structure that relates to pre-Quaternary cladogenetic events. In this study we undertake a detailed phylogeographic analysis of the lizard species, Lacerta lepida, whose distribution encompasses the entire Iberian Peninsula. We attempt to identify refugial areas, recolonization routes, zones of secondary contact and date demographic events within this species. Results support the existence of 6 evolutionary lineages (phylogroups) with a strong association between genetic variation and geography, suggesting a history of allopatric divergence in different refugia. Diversification within phylogroups is concordant with the onset of the Pleistocene climatic oscillations. The southern regions of several phylogroups show a high incidence of ancestral alleles in contrast with high incidence of recently derived alleles in northern regions. All phylogroups show signs of recent demographic and spatial expansions. We have further identified several zones of secondary contact, with divergent mitochondrial haplotypes occurring in narrow zones of sympatry. The concordant patterns of spatial and demographic expansions detected within phylogroups, together with the high incidence of ancestral haplotypes in southern regions of several phylogroups, suggests a pattern of contraction of populations into southern refugia during adverse climatic conditions from which subsequent northern expansions occurred. This study supports the emergent pattern of multiple refugia within Iberia but adds to it by identifying a pattern of refugia coincident with the southern distribution limits of individual evolutionary lineages. These areas are important in terms of long-term species persistence and therefore important areas for conservation.

Evolutionary refugia and ecological refuges: key concepts for conserving Australian arid zone freshwater biodiversity under climate change.

PubMed

Davis, Jenny; Pavlova, Alexandra; Thompson, Ross; Sunnucks, Paul

2013-07-01

Refugia have been suggested as priority sites for conservation under climate change because of their ability to facilitate survival of biota under adverse conditions. Here, we review the likely role of refugial habitats in conserving freshwater biota in arid Australian aquatic systems where the major long-term climatic influence has been aridification. We introduce a conceptual model that characterizes evolutionary refugia and ecological refugees based on our review of the attributes of aquatic habitats and freshwater taxa (fishes and aquatic invertebrates) in arid Australia. We also identify methods of recognizing likely future refugia and approaches to assessing the vulnerability of arid-adapted freshwater biota to a warming and drying climate. Evolutionary refugia in arid areas are characterized as permanent, groundwater-dependent habitats (subterranean aquifers and springs) supporting vicariant relicts and short-range endemics. Ecological refugees can vary across space and time, depending on the dispersal abilities of aquatic taxa and the geographical proximity and hydrological connectivity of aquatic habitats. The most important are the perennial waterbodies (both groundwater and surface water fed) that support obligate aquatic organisms. These species will persist where suitable habitats are available and dispersal pathways are maintained. For very mobile species (invertebrates with an aerial dispersal phase) evolutionary refugia may also act as ecological refugees. Evolutionary refugia are likely future refugia because their water source (groundwater) is decoupled from local precipitation. However, their biota is extremely vulnerable to changes in local conditions because population extinction risks cannot be abated by the dispersal of individuals from other sites. Conservation planning must incorporate a high level of protection for aquifers that support refugial sites. Ecological refuges are vulnerable to changes in regional climate because they have little thermal or hydrological buffering. Accordingly, conservation planning must focus on maintaining meta-population processes, especially through dynamic connectivity between aquatic habitats at a landscape scale. © 2013 Blackwell Publishing Ltd.

Amazon rain-forest fires.

PubMed

Sanford, R L; Saldarriaga, J; Clark, K E; Uhl, C; Herrera, R

1985-01-04

Charcoal is common in the soils of mature rain forests within 75 kilometers of San Carlos de Rio Negro in the north central Amazon Basin. Carbon-14 dates of soil charcoal from this region indicate that numerous fires have occurred since the mid-Holocene epoch. Charcoal is most common in tierra firme forest Oxisols and Ultisols and less common in caatinga and igapo forest soils. Climatic changes or human activities, or both, have caused rain-forest fires.

New species and new behavioral data of Phlugiola Karny, 1907 (Orthoptera: Tettigoniidae: Meconematinae) from the Brazilian Amazonian Rainforest.

PubMed

Mendes, Diego Matheus DE Mello; Oliveira, Jomara Cavalcante DE; Alves-Oliveira, João Rafael; Rafael, José Albertino

2017-03-16

Phlugiola Karny, 1907 is a genus of small predatory katydids with six included species distributed in Brazil, Bolivia, Colombia, Peru and Suriname. In this paper two new Brazilian species are described, Phlugiola longipedes sp. nov. (type locality: Amazonas, Tefé) and Phlugiola igarape sp. nov., (type locality: Acre, Bujari) both from tropical rainforests. Behavioral data and natural history notes are provided.

An autogamous rainforest species of Schiedea (Caryophyllaceae) from East Maui, Hawaiian Islands

USGS Publications Warehouse

Wagner, W.L.; Weller, S.G.; Sakai, A.K.; Medeiros, A.C.

1999-01-01

A new autogamous species of Schiedea is described and illustrated. It is known only from cliff habitat in rainforest on a single ridge in the Natural Area Reserve, Hanawi, East Maui. With the addition of this species there are 28 species in this endemic Hawaiian genus. The new species appears to be most closely related to Schiedea nuttallii, a species of mesic habitats on O'ahu, Moloka'i, and Maui.

Mapping Deforestation and Land Use in Amazon Rainforest Using SAR-C Imagery

NASA Technical Reports Server (NTRS)

Saatchi, Sasan S.; Soares, Joao Vianei; Alves, Diogenes Salas

1996-01-01

Land use changes and deforestation in tropical rainforests are among the major factors affecting the overall function of the global environment. To routinely assess the spatial extend and temporal dynamics of these changes has become an important challenge in several scientific disciplines such as climate and environmental studies. In this paper, the feasibility of using polarimetric spaceborne SAR data in mapping land cover types in the Amazon is studied.

Tropical rainforest response to marine sky brightening climate engineering

NASA Astrophysics Data System (ADS)

Muri, Helene; Niemeier, Ulrike; Kristjánsson, Jón Egill

2015-04-01

Tropical forests represent a major atmospheric carbon dioxide sink. Here the gross primary productivity (GPP) response of tropical rainforests to climate engineering via marine sky brightening under a future scenario is investigated in three Earth system models. The model response is diverse, and in two of the three models, the tropical GPP shows a decrease from the marine sky brightening climate engineering. Partial correlation analysis indicates precipitation to be important in one of those models, while precipitation and temperature are limiting factors in the other. One model experiences a reversal of its Amazon dieback under marine sky brightening. There, the strongest partial correlation of GPP is to temperature and incoming solar radiation at the surface. Carbon fertilization provides a higher future tropical rainforest GPP overall, both with and without climate engineering. Salt damage to plants and soils could be an important aspect of marine sky brightening.

Phylogenetic Evidence for the Existence of Multiple Strains of Rickettsia parkeri in the New World.

PubMed

Nieri-Bastos, Fernanda A; Marcili, Arlei; De Sousa, Rita; Paddock, Christopher D; Labruna, Marcelo B

2018-04-15

The bacterium Rickettsia parkeri has been reported to infect ticks of the " Amblyomma maculatum species complex" in the New World, where it causes spotted fever illness in humans. In South America, three additional rickettsial strains, namely, Atlantic rainforest, NOD, and Parvitarsum, have been isolated from the ticks Amblyomma ovale , Amblyomma nodosum , and Amblyomma parvitarsum , respectively. These three strains are phylogenetically closely related to R. parkeri , Rickettsia africae , and Rickettsia sibirica Herein, we performed a robust phylogenetic analysis encompassing 5 genes ( gltA , ompA , virB4 , dnaA , and dnaK ) and 3 intergenic spacers ( mppE-pur , rrl-rrf -ITS, and rpmE -tRNA fMet ) from 41 rickettsial isolates, including different isolates of R. parkeri , R. africae , R. sibirica , Rickettsia conorii , and strains Atlantic rainforest, NOD, and Parvitarsum. In our phylogenetic analyses, all New World isolates grouped in a major clade distinct from the Old World Rickettsia species ( R. conorii , R. sibirica , and R. africae ). This New World clade was subdivided into the following 4 clades: the R. parkeri sensu stricto clade, comprising the type strain Maculatum 20 and all other isolates of R. parkeri from North and South America, associated with ticks of the A. maculatum species complex; the strain NOD clade, comprising two South American isolates from A. nodosum ticks; the Parvitarsum clade, comprising two South American isolates from A. parvitarsum ticks; and the strain Atlantic rainforest clade, comprising six South American isolates from the A. ovale species complex ( A. ovale or Amblyomma aureolatum ). Under such evidences, we propose that strains Atlantic rainforest, NOD, and Parvitarsum are South American strains of R. parkeri IMPORTANCE Since the description of Rickettsia parkeri infecting ticks of the " Amblyomma maculatum species complex" and humans in the New World, three novel phylogenetic close-related rickettsial isolates were reported in South America. Herein, we provide genetic evidence that these novel isolates, namely, strains Atlantic rainforest, NOD, and Parvitarsum, are South American strains of R. parkeri. Interestingly, each of these R. parkeri strains seems to be primarily associated with a tick species group, namely, R. parkeri sensu stricto with the " Amblyomma maculatum species group," R. parkeri strain NOD with Amblyomma nodosum , R. parkeri strain Parvitarsum with Amblyomma parvitarsum , and R. parkeri strain Atlantic rainforest with the " Amblyomma ovale species group." Such rickettsial strain-tick species specificity suggests a coevolution of each tick-strain association. Finally, because R. parkeri sensu stricto and R. parkeri strain Atlantic rainforest are human pathogens, the potential of R. parkeri strains NOD and Parvitarsum to be human pathogens cannot be discarded. Copyright © 2018 American Society for Microbiology.

Simulating carbon, water and energy fluxes of a rainforest and an oil palm plantation using the Community Land Model (CLM4.5)

NASA Astrophysics Data System (ADS)

Fan, Yuanchao; Bernoux, Martial; Roupsard, Olivier; Panferov, Oleg; Le Maire, Guerric; Tölle, Merja; Knohl, Alexander

2014-05-01

Deforestation and forest degradation driven by the expansion of oil palm (Elaeis guineensis) plantations has become the major source of GHG emission in Indonesia. Changes of land surface properties (e.g. vegetation composition, soil property, surface albedo) associated with rainforest to oil palm conversion might alter the patterns of land-atmosphere energy, water and carbon cycles and therefore affect local or regional climate. Land surface modeling has been widely used to characterize the two-way interactions between climate and human disturbances on land surface. The Community Land Model (CLM) is a third-generation land model that simulates a wide range of biogeophysical and biogeochemical processes. This project utilizes the land-cover/land-use change (LCLUC) capability of the latest CLM versions 4/4.5 to characterize quantitatively how anthropogenic land surface dynamics in Indonesia affect land-atmosphere carbon, water and energy fluxes. Before simulating land use changes, the first objective is to parameterize and validate the CLM model at local rainforest and oil palm plantation sites through separate point simulations. This entails creation and parameterization of a new plant functional type (PFT) for oil palm, as well as sensitivity analysis and adaptation of model parameters for the rainforest PFTs. CLM modelled fluxes for the selected sites are to be compared with field observations from eddy covariance (EC) flux towers (e.g. a rainforest site in Bariri, Sulawesi; an oil palm site in Jambi, Sumatra). After validation, the project will proceed to parameterize land-use transformation system using remote sensing data and to simulate the impacts of historical LUCs on carbon, water and energy fluxes. Last but not least, the effects of future LUCs in Indonesia on the fluxes and carbon sequestration capacity will be investigated through scenario study. Historical land cover changes, especially oil palm coverage, are retrieved from Landsat or MODIS archival images. Oil palm concession boundaries are used to define and project future land use scenarios. Initial results include outputs from a single-point simulation for the Bariri rainforest site forced with locally measured meteorological data which already showed significant advantage over global forcing data in predicting net ecosystem exchange and latent and sensible heat fluxes. Modeled fluxes are being compared with EC flux observations and with Mixfor-SVAT model outputs from another project at the same site. In the next few months, focus will be on sensitivity analyses of model parameters including PFT optical, morphological and physiological parameters that are necessary to configure the new oil palm PFT and represent rainforest to oil palm conversion. The new parameterization will contribute to the development of the CLM model and its implementation in the modelling of LUC effects in tropical regions will help understanding land-climate interactions.

Vegetation and floristics of a lowland tropical rainforest in northeast Australia

PubMed Central

Apgaua, Deborah M. G.; Campbell, Mason J; Cox, Casey J; Crayn, Darren M; Ishida, Françoise Y; Laidlaw, Melinda J; Liddell, Michael J; Seager, Michael; Laurance, Susan G. W.

2016-01-01

Abstract Background Full floristic data, tree demography, and biomass estimates incorporating non-tree lifeforms are seldom collected and reported for forest plots in the tropics. Established research stations serve as important repositories of such biodiversity and ecological data. With a canopy crane setup within a tropical lowland rainforest estate, the 42-ha Daintree Rainforest Observatory (DRO) in Cape Tribulation, northern Australia is a research facility of international significance. We obtained an estimate of the vascular plant species richness for the site, by surveying all vascular plant species from various mature-phase, remnant and open vegetation patches within the site. We also integrate and report the demography and basal areas of trees ≥ 10 cm diameter at breast height (dbh) in a new 1-ha core plot, an extension to the pre-existing forest 1-ha plot under the canopy crane. In addition, we report for the canopy crane plot new demography and basal areas for smaller-size shrubs and treelets subsampled from nine 20 m2 quadrats, and liana basal area and abundance from the whole plot. The DRO site has an estimated total vascular plant species richness of 441 species, of which 172 species (39%) are endemic to Australia, and 4 species are endemics to the Daintree region. The 2 x 1-ha plots contains a total of 262 vascular plant species of which 116 (1531 individuals) are tree species ≥ 10 cm dbh. We estimate a stem basal area of 34.9 m2 ha-1, of which small stems (tree saplings and shrubs <10cm dbh) and lianas collectively contribute c.4.2%. Comparing the stem density-diversity patterns of the DRO forest with other tropical rainforests globally, our meta-analysis shows that DRO forests has a comparatively high stem density and moderate species diversity, due to the influence of cyclones. These data will provide an important foundation for ecological and conservation studies in lowland tropical forest. New information We present a floristic checklist, a lifeform breakdown, and demography data from two 1-ha rainforest plots from a lowland tropical rainforest study site. We also present a meta-analysis of stem densities and species diversity from comparable-sized plots across the tropics. PMID:27099552

Chilean and Southeast Pacific paleoclimate variations during the last glacial cycle: directly correlated pollen and δ18O records from ODP Site 1234

NASA Astrophysics Data System (ADS)

Heusser, Linda; Heusser, Cal; Mix, Alan; McManus, Jerry

2006-12-01

Joint pollen and oxygen isotope data from Ocean Drilling Program Site 1234 in the southeast Pacific provide the first, continuous record of temperate South American vegetation and climate from the last 140 ka. Located at ˜36°S, ˜65 km offshore of Concepcion, Chile, Site 1234 monitors the climatic transition zone between northern semi-arid, summer dry-winter wet climate and southern year-round, rainy, cool temperate climate. Dominance of onshore winds suggests that pollen preserved here reflects transport to the ocean via rivers that drain the region and integrate conditions from the coastal mountains to the Andean foothills. Down-hole changes in diagnostic pollen assemblages from xeric lowland deciduous forest (characterized by grasses, herbs, ferns, and trees such as deciduous beech, Nothofagus obliqua), mesic Valdivian Evergreen Forest (including conifers such as the endangered Prumnopitys andina), and Subantarctic Evergreen Rainforest (comprised primarily of southern beech, N. dombeyi) reveal large rapid shifts that likely reflect latitudinal movements in atmospheric circulation and storm tracks associated with the southern westerly winds. During glacial intervals (MIS 2-4, and 6), rainforests and parkland dominated by Nothofagus moved northward into the region. At the MIS 6/5e transition, coeval with the rapid shift to lower isotopic values, rainforest vegetation was rapidly replaced by xeric plant communities associated with Mediterranean-type climate. An increased prominence of halophytic vegetation suggests that MIS 5e was more arid and possibly warmer than MIS 1. Although rainforest pollen rises again at the end of MIS 5e, lowland deciduous forest pollen persists through MIS 5d and 5c, into MIS 5b. Substantial millennial-scale variations occur in both interglacial and glacial regimes, attesting to the sensitivity of the southern westerly belt to climate change. Comparison of the cool, mesic N. dombeyi rainforest assemblage from Site 1234 with δ18O in the Byrd Ice core shows that on time scales longer than ˜10 ka, cool-moist conditions in central Chile were coherent with and occurred in phase with Antarctic cooling. This is also likely at millennial scales, although rainforest pollen lags Antarctic cooling with exponential response times of about 1000 years, which plausibly reflects the ecological response time to regional climate change.

Reviews and syntheses: Australian vegetation phenology: new insights from satellite remote sensing and digital repeat photography

NASA Astrophysics Data System (ADS)

Moore, Caitlin E.; Brown, Tim; Keenan, Trevor F.; Duursma, Remko A.; van Dijk, Albert I. J. M.; Beringer, Jason; Culvenor, Darius; Evans, Bradley; Huete, Alfredo; Hutley, Lindsay B.; Maier, Stefan; Restrepo-Coupe, Natalia; Sonnentag, Oliver; Specht, Alison; Taylor, Jeffrey R.; van Gorsel, Eva; Liddell, Michael J.

2016-09-01

Phenology is the study of periodic biological occurrences and can provide important insights into the influence of climatic variability and change on ecosystems. Understanding Australia's vegetation phenology is a challenge due to its diverse range of ecosystems, from savannas and tropical rainforests to temperate eucalypt woodlands, semi-arid scrublands, and alpine grasslands. These ecosystems exhibit marked differences in seasonal patterns of canopy development and plant life-cycle events, much of which deviates from the predictable seasonal phenological pulse of temperate deciduous and boreal biomes. Many Australian ecosystems are subject to irregular events (i.e. drought, flooding, cyclones, and fire) that can alter ecosystem composition, structure, and functioning just as much as seasonal change. We show how satellite remote sensing and ground-based digital repeat photography (i.e. phenocams) can be used to improve understanding of phenology in Australian ecosystems. First, we examine temporal variation in phenology on the continental scale using the enhanced vegetation index (EVI), calculated from MODerate resolution Imaging Spectroradiometer (MODIS) data. Spatial gradients are revealed, ranging from regions with pronounced seasonality in canopy development (i.e. tropical savannas) to regions where seasonal variation is minimal (i.e. tropical rainforests) or high but irregular (i.e. arid ecosystems). Next, we use time series colour information extracted from phenocam imagery to illustrate a range of phenological signals in four contrasting Australian ecosystems. These include greening and senescing events in tropical savannas and temperate eucalypt understorey, as well as strong seasonal dynamics of individual trees in a seemingly static evergreen rainforest. We also demonstrate how phenology links with ecosystem gross primary productivity (from eddy covariance) and discuss why these processes are linked in some ecosystems but not others. We conclude that phenocams have the potential to greatly improve the current understanding of Australian ecosystems. To facilitate the sharing of this information, we have formed the Australian Phenocam Network (http://phenocam.org.au/).

Extinction risks forced by climatic change and intraspecific variation in the thermal physiology of a tropical lizard.

PubMed

Pontes-da-Silva, Emerson; Magnusson, William E; Sinervo, Barry; Caetano, Gabriel H; Miles, Donald B; Colli, Guarino R; Diele-Viegas, Luisa M; Fenker, Jessica; Santos, Juan C; Werneck, Fernanda P

2018-04-01

Temperature increases can impact biodiversity and predicting their effects is one of the main challenges facing global climate-change research. Ectotherms are sensitive to temperature change and, although predictions indicate that tropical species are highly vulnerable to global warming, they remain one of the least studied groups with respect to the extent of physiological variation and local extinction risks. We model the extinction risks for a tropical heliothermic teiid lizard (Kentropyx calcarata) integrating previously obtained information on intraspecific phylogeographic structure, eco-physiological traits and contemporary species distributions in the Amazon rainforest and its ecotone to the Cerrado savannah. We also investigated how thermal-biology traits vary throughout the species' geographic range and the consequences of such variation for lineage vulnerability. We show substantial variation in thermal tolerance of individuals among thermally distinct sites. Thermal critical limits were highly correlated with operative environmental temperatures. Our physiological/climatic model predicted relative extinction risks for local populations within clades of K. calcarata for 2050 ranging between 26.1% and 70.8%, while for 2070, extinction risks ranged from 52.8% to 92.8%. Our results support the hypothesis that tropical-lizard taxa are at high risk of local extinction caused by increasing temperatures. However, the thermo-physiological differences found across the species' distribution suggest that local adaptation may allow persistence of this tropical ectotherm in global warming scenarios. These results will serve as basis to further research to investigate the strength of local adaptation to climate change. Persistence of Kentropyx calcarata also depends on forest preservation, but the Amazon rainforest is currently under high deforestation rates. We argue that higher conservation priority is necessary so the Amazon rainforest can fulfill its capacity to absorb the impacts of temperature increase on tropical ectotherms during climate change. Copyright © 2018 Elsevier Ltd. All rights reserved.

Tradeoffs between income, biodiversity, and ecosystem functioning during tropical rainforest conversion and agroforestry intensification

PubMed Central

Steffan-Dewenter, Ingolf; Kessler, Michael; Barkmann, Jan; Bos, Merijn M.; Buchori, Damayanti; Erasmi, Stefan; Faust, Heiko; Gerold, Gerhard; Glenk, Klaus; Gradstein, S. Robbert; Guhardja, Edi; Harteveld, Marieke; Hertel, Dietrich; Höhn, Patrick; Kappas, Martin; Köhler, Stefan; Leuschner, Christoph; Maertens, Miet; Marggraf, Rainer; Migge-Kleian, Sonja; Mogea, Johanis; Pitopang, Ramadhaniel; Schaefer, Matthias; Schwarze, Stefan; Sporn, Simone G.; Steingrebe, Andrea; Tjitrosoedirdjo, Sri S.; Tjitrosoemito, Soekisman; Twele, André; Weber, Robert; Woltmann, Lars; Zeller, Manfred; Tscharntke, Teja

2007-01-01

Losses of biodiversity and ecosystem functioning due to rainforest destruction and agricultural intensification are prime concerns for science and society alike. Potentially, ecosystems show nonlinear responses to land-use intensification that would open management options with limited ecological losses but satisfying economic gains. However, multidisciplinary studies to quantify ecological losses and socioeconomic tradeoffs under different management options are rare. Here, we evaluate opposing land use strategies in cacao agroforestry in Sulawesi, Indonesia, by using data on species richness of nine plant and animal taxa, six related ecosystem functions, and on socioeconomic drivers of agroforestry expansion. Expansion of cacao cultivation by 230% in the last two decades was triggered not only by economic market mechanisms, but also by rarely considered cultural factors. Transformation from near-primary forest to agroforestry had little effect on overall species richness, but reduced plant biomass and carbon storage by ≈75% and species richness of forest-using species by ≈60%. In contrast, increased land use intensity in cacao agroforestry, coupled with a reduction in shade tree cover from 80% to 40%, caused only minor quantitative changes in biodiversity and maintained high levels of ecosystem functioning while doubling farmers' net income. However, unshaded systems further increased income by ≈40%, implying that current economic incentives and cultural preferences for new intensification practices put shaded systems at risk. We conclude that low-shade agroforestry provides the best available compromise between economic forces and ecological needs. Certification schemes for shade-grown crops may provide a market-based mechanism to slow down current intensification trends. PMID:17360392

Tradeoffs between income, biodiversity, and ecosystem functioning during tropical rainforest conversion and agroforestry intensification.

PubMed

Steffan-Dewenter, Ingolf; Kessler, Michael; Barkmann, Jan; Bos, Merijn M; Buchori, Damayanti; Erasmi, Stefan; Faust, Heiko; Gerold, Gerhard; Glenk, Klaus; Gradstein, S Robbert; Guhardja, Edi; Harteveld, Marieke; Hertel, Dietrich; Höhn, Patrick; Kappas, Martin; Köhler, Stefan; Leuschner, Christoph; Maertens, Miet; Marggraf, Rainer; Migge-Kleian, Sonja; Mogea, Johanis; Pitopang, Ramadhaniel; Schaefer, Matthias; Schwarze, Stefan; Sporn, Simone G; Steingrebe, Andrea; Tjitrosoedirdjo, Sri S; Tjitrosoemito, Soekisman; Twele, André; Weber, Robert; Woltmann, Lars; Zeller, Manfred; Tscharntke, Teja

2007-03-20

Losses of biodiversity and ecosystem functioning due to rainforest destruction and agricultural intensification are prime concerns for science and society alike. Potentially, ecosystems show nonlinear responses to land-use intensification that would open management options with limited ecological losses but satisfying economic gains. However, multidisciplinary studies to quantify ecological losses and socioeconomic tradeoffs under different management options are rare. Here, we evaluate opposing land use strategies in cacao agroforestry in Sulawesi, Indonesia, by using data on species richness of nine plant and animal taxa, six related ecosystem functions, and on socioeconomic drivers of agroforestry expansion. Expansion of cacao cultivation by 230% in the last two decades was triggered not only by economic market mechanisms, but also by rarely considered cultural factors. Transformation from near-primary forest to agroforestry had little effect on overall species richness, but reduced plant biomass and carbon storage by approximately 75% and species richness of forest-using species by approximately 60%. In contrast, increased land use intensity in cacao agroforestry, coupled with a reduction in shade tree cover from 80% to 40%, caused only minor quantitative changes in biodiversity and maintained high levels of ecosystem functioning while doubling farmers' net income. However, unshaded systems further increased income by approximately 40%, implying that current economic incentives and cultural preferences for new intensification practices put shaded systems at risk. We conclude that low-shade agroforestry provides the best available compromise between economic forces and ecological needs. Certification schemes for shade-grown crops may provide a market-based mechanism to slow down current intensification trends.

Characterization of the Infrasound Field in the Central Pacific

DTIC Science & Technology

2006-06-01

Treaty (CTBT) in December 2001. The array site is in a tropical rainforest on the slopes of Hualalai Volcano , Hawaii Island, Hawaii . Per IMS...Test-Ban Treaty (CTBT) in December 2001. ’The array site is in a tropical rainforest on the slopes of Hualalai Volcano , Hawaii Island, Hawaii . Per IMS...general direction of Kilauea Volcano . These signals are tentatively assigned to the "iv" phase. To date the majority of these events have featured

Dry habitats were crucibles of domestication in the evolution of agriculture in ants.

PubMed

Branstetter, Michael G; Ješovnik, Ana; Sosa-Calvo, Jeffrey; Lloyd, Michael W; Faircloth, Brant C; Brady, Seán G; Schultz, Ted R

2017-04-12

The evolution of ant agriculture, as practised by the fungus-farming 'attine' ants, is thought to have arisen in the wet rainforests of South America about 55-65 Ma. Most subsequent attine agricultural evolution, including the domestication event that produced the ancestor of higher attine cultivars, is likewise hypothesized to have occurred in South American rainforests. The 'out-of-the-rainforest' hypothesis, while generally accepted, has never been tested in a phylogenetic context. It also presents a problem for explaining how fungal domestication might have occurred, given that isolation from free-living populations is required. Here, we use phylogenomic data from ultra-conserved element (UCE) loci to reconstruct the evolutionary history of fungus-farming ants, reduce topological uncertainty, and identify the closest non-fungus-growing ant relative. Using the phylogeny we infer the history of attine agricultural systems, habitat preference and biogeography. Our results show that the out-of-the-rainforest hypothesis is correct with regard to the origin of attine ant agriculture; however, contrary to expectation, we find that the transition from lower to higher agriculture is very likely to have occurred in a seasonally dry habitat, inhospitable to the growth of free-living populations of attine fungal cultivars. We suggest that dry habitats favoured the isolation of attine cultivars over the evolutionary time spans necessary for domestication to occur. © 2017 The Authors.

Bacillus spp. from rainforest soil promote plant growth under limited nitrogen conditions.

PubMed

Huang, X-F; Zhou, D; Guo, J; Manter, D K; Reardon, K F; Vivanco, J M

2015-03-01

The aim of this study was to evaluate effects of PGPR (plant growth-promoting rhizobacteria) isolated from rainforest soil on different plants under limited nitrogen conditions. Bacterial isolates from a Peruvian rainforest soil were screened for plant growth-promoting effects on Arabidopsis (Col-0). Four selected isolates including one Bacillus subtilis, two B. atrophaeus and one B. pumilus significantly promoted growth of Zea mays L. and Solanum lycopersicum under greenhouse conditions. Moreover, the PGPRs significantly promoted growth of S. lycopersicum in both low and nitrogen-amended soil conditions. These PGPR strains were further studied to obtain insights into possible mechanisms of plant growth promotion. Volatile chemicals from those isolates promoted Arabidopsis growth, and the expression of genes related to IAA production was induced in the Arabidopsis plants treated with PGPRs. Further, selected PGPR strains triggered induced systemic resistance (ISR) against Pseudomonas syringae pv tomato DC3000 in Arabidopsis. PGPR strains isolated from the rainforest soil promoted the plant growth of Arabidopsis, corn and tomato. New PGPR that have wider adaptability to different crops, soils and environmental conditions are needed to decrease our reliance on agricultural amendments derived from fossil-based fuels. The PGPRs isolated from a nonagricultural site constitute new plant growth-promoting strains that could be developed for agricultural uses. © 2014 The Society for Applied Microbiology.

Antitumour and antimicrobial activities of endophytic streptomycetes from pharmaceutical plants in rainforest.

PubMed

Li, J; Zhao, G-Z; Chen, H-H; Wang, H-B; Qin, S; Zhu, W-Y; Xu, L-H; Jiang, C-L; Li, W-J

2008-12-01

The aim of this study was to screen antitumour and antimicrobial activities of endophytic actinomycetes isolated from pharmaceutical plants in rainforest in Yunnan province, China. Antitumour activity was studied by the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assay and antimicrobial activity was determined by agar well diffusion method. The high bioactive endophytic isolates were identified and further investigated for the presence of polyketide synthases (PKS-I, PKS-II) and nonribosomal peptide synthetases (NRPS) sequences by specific amplification. The molecular identification confirmed that the 41 isolates showed significant activities were members of the genus Streptomyces. Among them, 31.7% of endophytic streptomycete cultures were cytotoxic against A549 cells, 29.3% against HL-60 cells, 85.4% against BEL-7404 cells, 90.2% against P388D1 cells, 65.9% were active against Escherichia coli, 24.4% against Staphylococcus aureus, 31.7% against Staphylococcus epidermidis, 12.2% against Candida albicans and no strain displayed antagonistic activity against Klebsiella pneumoniae. High frequencies of positive PCR amplification were obtained for PKS-I (34.1%), PKS-II (63.4%) and NRPS (61.0%) biosynthetic systems. Many endophytic streptomycetes isolated from pharmaceutical plants in rainforest possess remarkable and diverse antitumour and antimicrobial bioactivities. These endophytic streptomycetes are precious resources obtained from rainforests, and they could be a promising source for bioactive agents.

Water-carbon Links in a Tropical Forest: How Interbasin Groundwater Flow Affects Carbon Fluxes and Ecosystem Carbon Budgets

DOE Office of Scientific and Technical Information (OSTI.GOV)

Genereux, David; Osburn, Christopher; Oberbauer, Steven

This report covers the outcomes from a quantitative, interdisciplinary field investigation of how carbon fluxes and budgets in a lowland tropical rainforest are affected by the discharge of old regional groundwater into streams, springs, and wetlands in the forest. The work was carried out in a lowland rainforest of Costa Rica, at La Selva Biological Station. The research shows that discharge of regional groundwater high in dissolved carbon dioxide represents a significant input of carbon to the rainforest "from below", an input that is on average larger than the carbon input "from above" from the atmosphere. A stream receiving dischargemore » of regional groundwater had greatly elevated emissions of carbon dioxide (but not methane) to the overlying air, and elevated downstream export of carbon from its watershed with stream flow. The emission of deep geological carbon dioxide from stream water elevates the carbon dioxide concentrations in air above the streams. Carbon-14 tracing revealed the presence of geological carbon in the leaves and stems of some riparian plants near streams that receive inputs of regional groundwater. Also, discharge of regional groundwater is responsible for input of dissolved organic matter with distinctive chemistry to rainforest streams and wetlands. The discharge of regional groundwater in lowland surface waters has a major impact on the carbon cycle in this and likely other tropical and non-tropical forests.« less

Ecological studies of Eastern Australian fruit flies (Diptera: Tephritidae) in their endemic habitat : II. The spatial pattern of abundance.

PubMed

Zalucki, M P; Drew, R A I; Hooper, G H S

1984-10-01

11 fruit fly species captured at 47 sites in a natural forest area at Cooloola (south-east Queensland) revealed specific patterns of spatial abundance. Although all species were collected throughout the study area, D. bryoniae, D. mayi, D. neohumeralis and D. tryoni were more prevalent (average number caught per trap) in the open Eucalypt forest than the rainforest, whereas C. aequalis, D. absonifacies and D. endiandrae were more prevalent in the rainforest. D. cacuminatus, D. choristus, D. quadratus and D. signatifrons were equally prevalent throughout both forest types. Fly numbers were not distributed randomly throughout the trap sites. The clumped dispersion patterns seemed to be species specific as assessed and summarised by Taylor's Power Law. The exponent (b) relating mean spatial abundance to its variance ranged from 1.6-5.11 for the 11 species captured. Changing patterns of trap catches from one sampling period to another were analysed using correlograms for the 6 most abundant species (D. tryoni, D. neohumeralis, D. endiandrae, C. aequalis, D. cacuminatus and D. mayi). These revealed changing patterns of relative spatial abundance which can be related, in part, to changing population abundance levels. The various spatial patterns recognised are related to each species movement, breeding and feeding behaviour. It is proposed that flies migrate into the rainforest area from distant locations and that the rainforest habitat is an important adult feeding site.

Converging migration routes of Eurasian hobbies Falco subbuteo crossing the African equatorial rain forest

PubMed Central

Strandberg, Roine; Klaassen, Raymond H.G.; Hake, Mikael; Olofsson, Patrik; Alerstam, Thomas

2008-01-01

Autumn migration of adult Eurasian hobbies Falco subbuteo from Europe to southern Africa was recorded by satellite telemetry and observed routes were compared with randomly simulated routes. Two non-random features of observed routes were revealed: (i) shifts to more westerly longitudes than straight paths to destinations and (ii) strong route convergence towards a restricted area close to the equator (1° S, 15° E). The birds migrated south or southwest to approximately 10° N, where they changed to south-easterly courses. The maximal spread between routes at 10° N (2134 km) rapidly decreased to a minimum (67 km) close to the equator. We found a striking relationship between the route convergence and the distribution of continuous rainforest, suggesting that hobbies minimize flight distance across the forest, concentrating in a corridor where habitat may be more suitable for travelling and foraging. With rainforest forming a possible ecological barrier, many migrants may cross the equator either at 15° E, similar to the hobbies, or at 30–40° E, east of the rainforest where large-scale migration is well documented. Much remains to be understood about the role of the rainforest for the evolution and future of the trans-equatorial Palaearctic-African bird migration systems. PMID:18986977

[Canopy rainfall storage capacity of tropical seasonal rainforest and rubber plantation in Xishuangbanna].

PubMed

Wang, Xin; Zhang, Yiping

2006-10-01

Based on the 2003-2004 laboratory and field observation data, and with scaling-up method, this paper studied the canopy rainfall storage capacity of tropical seasonal rainforest and rubber plantation in Xishuangbanna. The results showed that the canopy rainfall storage capacity was 0.45-0.79 mm for tropical seasonal rainforest and 0.48-0.71 mm for rubber plantation, and that of the branch and bark accounted for >50 % of the total. For these two forests, the canopy rainfall storage capacity was much higher in foggy season (from November to February) and dry-hot season (from March to April) than in rainy season (from May to October), and the duration needed to reach water saturation was about 5 min for leaf, 2-3 h for bark, and 2. 5-4 h for branch. During the processes of wetting and air-drying, leaf was easier while branch and bark were somewhat difficult to hold water and then be air-dried, suggesting that leaf played an important role in intercepting rainfall in short-duration rainfall events, while branch and bark could work much better in doing this in long-duration or high-intensity rainfall events. Compared with rubber plantation, tropical seasonal rainforest had a stronger rainfall-storage capacity due to its multi-layer structure of canopy and excellent water-holding performance.

Changes of cloudiness over tropical land during the past few decades and its link to global climate change

NASA Astrophysics Data System (ADS)

Arias, P.; Fu, R.; Li, W.

2007-12-01

Tropical forests play a key role in determining the global carbon-climate feedback in the 21st century. Changes in rainforest growth and mortality rates, especially in the deep and least perturbed forest areas, have been consistently observed across global tropics in recent years. Understanding the underlying causes of these changes, especially their links to the global climate change, is especially important in determining the future of the tropical rainforests in the 21st century. Previous studies have mostly focus on the potential influences from elevated atmospheric CO2 and increasing surface temperature. Because the rainforests in wet tropical region is often light limited, we explore whether cloudiness have changed, if so, whether it is consistent with that expected from changes in forest growth rate. We will report our observational analysis examining the trends in annual average shortwave (SW) downwelling radiation, total cloud cover, and cumulus cover over the tropical land regions and to link them with trends in convective available potencial energy (CAPE). ISCCP data and radiosonde records available from the Department of Atmospheric Sciences of the University of Wyoming (http://www.weather.uwyo.edu/upperair/sounding.html) are used to study the trends. The period for the trend analysis is 1984-2004 for the ISCCP data and 1980-2006 for the radiosondes. The results for the Amazon rainforest region suggest a decreasing trend in total cloud and convective cloud covers, which results in an increase in downwelling SW radiation at the surface. These changes of total and convective clouds are consistent with a trend of decreasing CAPE and an elevated Level of Free Convection (LFC) height, as obtained from the radiosondes. All the above mentioned trends are statistically significant based on the Mann-Kendall test with 95% of confidence. These results consistently suggest the downward surface solar radiation has been increasing since 1984, result from a decrease of convective and total cloudiness over the Southern Amazon basin, due to an increase of LFC and atmospheric thermodynamic stability. Such an increase of surface SW radiation probably has contributed to the increasing in growth rate for the forests in the Amazon forests. Currently, the same analysis is being applied using radiosonde data from the Comprehensive Aerological Reference Data Set (CARDS) over the Amazon and Congo basins and the Southeast Asia. Our objective is to identify changes in cloudiness over tropical land and identify its underlying causes, especially the link to changes in surface temperature and humidity.

Variation in leaf litter production and resorption of nutrients in abundant tree species in Nyungwe tropical montane rainforest in Rwanda

NASA Astrophysics Data System (ADS)

Nyirambangutse, Brigitte; Mirindi Dusenge, Eric; Nsabimana, Donat; Bizuru, Elias; Pleijel, Håkan; Uddling, Johan; Wallin, Göran

2014-05-01

African tropical rainforests play many roles from local to global scale as providers of resources and ecosystem services. Although covering 30% of the global rainforest, only few studies aiming to better understand the storage and fluxes of carbon and nutrients in these forests have been conducted. To answer questions related to these issues, we have established 15 permanent 0.5 ha plots where we compare carbon and nutrient fluxes of primary and secondary forest tree communities in a tropical montane forest in central Africa. The studies are conducted in Nyungwe montane tropical rain forest gazetted as a National Park to protect its extensive floral and faunal diversity covering an area of 970 km2. Nyungwe is located in Southwest Rwanda (2o17'-2o50'S, 29o07'-29o26A'E). The forest is ranging between 1600-2950 m.a.s.l. and is one of the most biologically important rainforest in Albertine Rift region in terms of Biodiversity. Nyungwe consists of a mixture of primary and secondary forest communities supporting a richness of plant and animal life. More than 260 species of trees and shrubs have been found in Nyungwe, including species endemic to the Albertine Rift. The forest has a climate with a mean annual temperature of 15.5oC and annual rainfall of ca 1850 mm yr-1, with July and August being the only months when rainfall drops. A part of this study is focusing on the dynamics of nutrients through leaf turnover. This turnover of leaves is regulated to maximize the carbon gain through canopy photosynthesis and resource-use efficiency of the plant. It is known that about half of leaf nitrogen is invested in photosynthetic apparatus and that there normally is a strong correlation between the photosynthetic capacity and leaf nitrogen per unit area. Hence leaf nitrogen is an important factor for canopy photosynthesis. However, leaves are produced, senesce and fall. Some nitrogen in the leaf is lost when leaves senesce but other is resorbed. The resorption of nitrogen, phosphorus and other nutrients is being studied to analyse the nutrient saving efficiency of different species within the primary and secondary forest communities. This is made by analyzing the nutrient content within fresh and fallen leaves of most abundant pioneer and climax species. Results from litterfall patterns as well as foliar, litter and soil carbon and nutrients are currently being compiled and will be reported.

Ecosystem services capacity across heterogeneous forest types: understanding the interactions and suggesting pathways for sustaining multiple ecosystem services.

PubMed

Alamgir, Mohammed; Turton, Stephen M; Macgregor, Colin J; Pert, Petina L

2016-10-01

As ecosystem services supply from tropical forests is declining due to deforestation and forest degradation, much effort is essential to sustain ecosystem services supply from tropical forested landscapes, because tropical forests provide the largest flow of multiple ecosystem services among the terrestrial ecosystems. In order to sustain multiple ecosystem services, understanding ecosystem services capacity across heterogeneous forest types and identifying certain ecosystem services that could be managed to leverage positive effects across the wider bundle of ecosystem services are required. We sampled three forest types, tropical rainforests, sclerophyll forests, and rehabilitated plantation forests, over an area of 32,000m(2) from Wet Tropics bioregion, Australia, aiming to compare supply and evaluate interactions and patterns of eight ecosystem services (global climate regulation, air quality regulation, erosion regulation, nutrient regulation, cyclone protection, habitat provision, energy provision, and timber provision). On average, multiple ecosystem services were highest in the rainforests, lowest in sclerophyll forests, and intermediate in rehabilitated plantation forests. However, a wide variation was apparent among the plots across the three forest types. Global climate regulation service had a synergistic impact on the supply of multiple ecosystem services, while nutrient regulation service was found to have a trade-off impact. Considering multiple ecosystem services, most of the rehabilitated plantation forest plots shared the same ordination space with rainforest plots in the ordination analysis, indicating that rehabilitated plantation forests may supply certain ecosystem services nearly equivalent to rainforests. Two synergy groups and one trade-off group were identified. Apart from conserving rainforests and sclerophyll forests, our findings suggest two additional integrated pathways to sustain the supply of multiple ecosystem services from a heterogeneous tropical forest landscape: (i) rehabilitation of degraded forests aiming to provide global climate regulation and habitat provision ecosystem services and (ii) management intervention to sustain global climate regulation and habitat provision ecosystem services. Copyright © 2016 Elsevier B.V. All rights reserved.

Effect of different crops on soil organic matter and biological activity in Oxisols under three different crops

NASA Astrophysics Data System (ADS)

Toledo, Diana Marcela; Arzuaga, Silvia; Dalurzo, Humberto; Zornoza, Raúl; Vazquez, Sara

2015-04-01

The objective of this work was to evaluate changes in soil organic matter in Oxisols under different crops compared to native rainforest, and to assess if acid phosphatase activity (APA) could be a good indicator for SOC changes and soil quality. The experimental design consisted of four completely randomized blocks with four treatments: subtropical rainforest (F); yerba mate crop (I) (Ilex paraguariensis SH.); citrus crop (C) (Citrus unshiu Marc); and tobacco crop (T) (Nicotiana tabacum L.). Soil samples were taken at 0-10; 10-20 and 20-30 cm depths. The variables measured were soil organic carbon (SOC), APA, clay content, pH, total nitrogen (Nt), available phosphorus (P) and CO2 emissions. All data were analyzed by ANOVA to assess the effects of land-use changes. The treatment means were compared through Duncan's multiple range tests (p<0.05). The relationship between variables was determined with a simple correlation analysis and with a multiple linear regression analysis through the stepwise method. These soils showed an acid reaction and their clay content was over 650 g kg-1 for the three depths. SOC and N contents were higher in native soils, intermediate for the citrus crop, and lower under both tobacco and yerba mate crops. CO2 emissions were higher in the rainforest (47.32 kg ha-1 of CO2) than in cultivated soils, which indicates that biological activity is enhanced in rainforest soils where substrates for soil biota and fauna are more readily available. The variability of 76% in APA was explained by total nitrogen, which is closely related to soil organic matter, and by available P. Conversion of subtropical rainforests into agricultural lands reduced SOC content and acid phosphatase activity, thereby lowering soil quality. In this study, acid phosphatase activity proved to be a sensitive indicator to detect changes from pristine to cropped soils, but it failed to distinguish differences among crop systems.

Evolutionary consequences of human disturbance in a rainforest bird species from Central Africa.

PubMed

Smith, Thomas B; Milá, Borja; Grether, Gregory F; Slabbekoorn, Hans; Sepil, Irem; Buermann, Wolfgang; Saatchi, Sassan; Pollinger, John P

2008-01-01

Relatively little attention has been directed towards understanding the impacts of human disturbance on evolutionary processes that produce and maintain biodiversity. Here, we examine the influence of anthropogenic habitat changes on traits typically associated with natural and sexual selection in the little greenbul (Andropadus virens), an African rainforest bird species. Using satellite remote-sensing and field survey data, we classified habitats into nonhuman-altered mature and human-altered secondary forest. Mature rainforest consisted of pristine rainforest, with little or no human influence, and secondary forest was characterized by plantations of coffee and cacao and high human impacts. Andropadus virens abundance was higher in secondary forest, and populations inhabiting mature rainforest were significantly larger in wing and tarsus length and bill size; characters often correlated with fitness. To assess the extent to which characters important in sexual section and mate choice might be influenced by habitat change, we also examined differences in plumage colour and song. Plumage colour and the variance in plumage luminance were found to differ between forest types, and song duration was found to be significantly longer in mature forest. The possible adaptive significance of these differences in traits is discussed. Despite relatively high levels of gene flow across habitats, amplified fragment length polymorphism analysis revealed that a small proportion of high-F(ST) loci differentiated mature from secondary forest populations. These loci were significant outliers against neutral expectations in a simulation analysis, suggesting a role for divergent selection in differentiation across habitats. A distance-based redundancy analysis further showed that forest type as defined by remote-sensing variables was significantly associated with genetic dissimilarities between habitats, even when controlling for distance. The observed shifts in morphology, plumage and song were consistent with divergent selection on heritable variation, but a role for plasticity cannot be ruled out. Results suggest that anthropogenic habitat changes may have evolutionary consequences, with implications for conservation and restoration.

Saharan Dust Fertilizing Atlantic Ocean and Amazon Rainforest via Long-range Transport and Deposition: A Perspective from Multiyear Satellite Measurements

NASA Astrophysics Data System (ADS)

Yu, H.; Chin, M.; Yuan, T.; Bian, H.; Remer, L. A.; Prospero, J. M.; Omar, A. H.; Winker, D. M.; Yang, Y.; Zhang, Y.; Zhang, Z.; Zhao, C.

2015-12-01

Massive dust emitted from Sahara desert is carried by trade winds across the tropical Atlantic Ocean, reaching the Amazon Rainforest and Caribbean Sea. Airborne dust degrades air quality and interacts with radiation and clouds. Dust falling to land and ocean adds essential nutrients that could increase the productivity of terrestrial and aquatic ecosystems and modulate the biogeochemical cycles and climate. The resultant climate change will feed back on the production of dust in Sahara desert and its subsequent transport and deposition. Understanding the connections among the remote ecosystems requires an accurate quantification of dust transport and deposition flux on large spatial and temporal scales, in which satellite remote sensing can play an important role. We provide the first multiyear satellite-based estimates of altitude-resolved across-Atlantic dust transport and deposition based on eight-year (2007-2014) record of aerosol three-dimensional distributions from the CALIPSO lidar. On a basis of the 8-year average, 179 Tg (million tons) of dust leaves the coast of North Africa and is transported across Atlantic Ocean, of which 102, 20, and 28 Tg of dust is deposited into the tropical Atlantic Ocean, Caribbean Sea, and Amazon Rainforest, respectively. The dust deposition adds 4.3 Tg of iron and 0.1 Tg of phosphorus to the tropical Atlantic Ocean and Caribbean Sea where the productivity of marine ecosystem depends on the availability of these nutrients. The 28 Tg of dust provides about 0.022 Tg of phosphorus to Amazon Rainforest yearly that replenishes the leak of this plant-essential nutrient by rains and flooding, suggesting an important role of Saharan dust in maintaining the productivity of Amazon rainforest on timescales of decades or centuries. We will also discuss seasonal and interannual variations of the dust transport and deposition, and comparisons of the CALIOP-based estimates with model simulations.

Are tree ontogenetic structure and allometric relationship independent of vegetation formation type? A case study with Cordia oncocalyx in the Brazilian caatinga

NASA Astrophysics Data System (ADS)

Silveira, Andréa P.; Martins, Fernando R.; Araújo, Francisca S.

2012-08-01

In temperate and tropical rainforests, ontogenetic structure and allometry during tree ontogeny are often associated with light gradients. Light is not considered a limiting resource in deciduous thorny woodland (DTW), but establishment and growth occur during a short rainy period, when the canopy is fully leaved and light in the understory may be modified. Our aim was to investigate whether the light gradient in DTW and the biomechanical limitations of tree growth would be enough to produce an ontogenetic structure and allometric growth similar to rainforest canopy trees. We investigated the ontogenetic stages and diameter-height relationship of Cordia oncocalyx (Boraginaceae), a dominant canopy tree of the DTW of semiarid northeastern Brazil. We tagged, measured and classified the ontogenetic stages of 2.895 individuals in a 1 ha area (5°6'58.1″S and 40°52'19.4″W). In the rainy season only 4.7% of the light falling on the canopy reached the ground. Initial ontogenetic stages, mainly infant (50.9%) and seedling (42.1%), were predominant in the population, with the remaining 7% distributed among juvenile, immature, virginile and reproductive. The ontogenetic structure was similar to that of rainforest tree species, but the population formed both permanent seed and infant banks in response to long dry periods and erratic rainy spells. Like many other Boraginaceae tree species in tropical rainforests, C. oncocalyx has a Prévost architectural model, but allometric growth was quite different from rainforest trees. C. oncocalyx invested slightly more in diameter at first, then in height and finally invested greatly in diameter and attained an asymptotic height. The continued high investment in diameter growth at late stages and the asymptotic height point to low tree density and more frequent xylem embolism as the main drivers of tree allometric shape in DTW. This indicates that tree ontogenetic structure and allometric relationships depend on vegetation formation type.

Slipping through the Cracks: Rubber Plantation Is Unsuitable Breeding Habitat for Frogs in Xishuangbanna, China

PubMed Central

Behm, Jocelyn E.; Yang, Xiaodong; Chen, Jin

2013-01-01

Conversion of tropical forests into agriculture may present a serious risk to amphibian diversity if amphibians are not able to use agricultural areas as habitat. Recently, in Xishuangbanna Prefecture, Yunnan Province – a hotspot of frog diversity within China – two-thirds of the native tropical rainforests have been converted into rubber plantation agriculture. We conducted surveys and experiments to quantify habitat use for breeding and non-breeding life history activities of the native frog species in rainforest, rubber plantation and other human impacted sites. Rubber plantation sites had the lowest species richness in our non-breeding habitat surveys and no species used rubber plantation sites as breeding habitat. The absence of breeding was likely not due to intrinsic properties of the rubber plantation pools, as our experiments indicated that rubber plantation pools were suitable for tadpole growth and development. Rather, the absence of breeding in the rubber plantation was likely due to a misalignment of breeding and non-breeding habitat preferences. Analyses of our breeding surveys showed that percent canopy cover over pools was the strongest environmental variable influencing breeding site selection, with species exhibiting preferences for pools under both high and low canopy cover. Although rubber plantation pools had high canopy cover, the only species that bred in high canopy cover sites used the rainforest for both non-breeding and breeding activities, completing their entire life cycle in the rainforest. Conversely, the species that did use the rubber plantation for non-breeding habitat preferred to breed in low canopy sites, also avoiding breeding in the rubber plantation. Rubber plantations are likely an intermediate habitat type that ‘slips through the cracks’ of species habitat preferences and is thus avoided for breeding. In summary, unlike the rainforests they replaced, rubber plantations alone may not be able to support frog populations. PMID:24040026

Origin of the Hawaiian rainforest ecosystem and its evolution in long-term primary succession

NASA Astrophysics Data System (ADS)

Mueller-Dombois, D.; Boehmer, H. J.

2013-02-01

Born among volcanoes in the north central Pacific about 4 million years ago, the Hawaiian rainforest became assembled from spores of algae, fungi, lichens, bryophytes, ferns and from seeds of about 275 flowering plants that over the millenia evolved into ca. 1000 endemic species. Outstanding among the forest builders were the tree ferns (Cibotium spp.) and the 'Ōhi'a lehua trees (Metrosideros spp.), which still dominate the Hawaiian rainforest ecosystem today. The structure of this forest is simple. The canopy in closed mature rainforests is dominated by cohorts of Metrosideros polymorpha and the undergrowth by tree fern species of Cibotium. When a new lava flow cuts through this forest, kipuka are formed, i.e. islands of remnant vegetation. On the new volcanic substrate, the assemblage of plant life-forms is similar as during the evolution of this system. In open juvenile forests, a mat-forming fern, the uluhe fern (Dicranopteris lineraris) becomes established. It inhibits further regeneration of the dominant 'Ōhi'a tree, thereby reinforcing the cohort structure of the canopy guild. In the later part of its life cycle, the canopy guild breaks down often in synchrony. The trigger is hypothesized to be a climatic perturbation. After that disturbance the forest becomes reestablished in about 30-40 yr. As the volcanic surfaces age, they go from a mesotrophic to a eutrophic phase, reaching a biophilic nutrient climax by about 1-25 K yr. Thereafter, a regressive oligotrophic phase follows; the soils become exhausted of nutrients. The shield volcanoes break down. Marginally, forest habitats change into bogs and stream ecosystems. The broader 'Ōhi'a rainforest redeveloping in the more dissected landscapes of the older islands looses stature, often forming large gaps that are invaded by the aluminum tolerant uluhe fern. The 'Ōhi'a trees still thrive on soils rejuvenated from landslides and from Asian dust on the oldest (5 million year old) island Kaua'i but their stature and living biomass is greatly diminished.

OH radical "life expectancy" within and above the Amazon rainforest: vertical, diel and seasonal variations

NASA Astrophysics Data System (ADS)

Nölscher, A.; Yanez-Serrano, A. M.; Kesselmeier, J.; Artaxo, P. P.; Wolff, S.; Trebs, I.; Williams, J.

2013-12-01

The Amazon rainforest forest is the world's largest contiguous ecosystem. Being about 6 million km2 it is around two thirds the area of the United States. The Amazon forest plays an important part of the Earth's hydrological, energy and carbon cycles. Photosynthetic uptake of CO2 by the rainforest affects the global radiative budget and concomitant release of reactive biogenic volatile organic compounds (BVOCs) can directly impact the atmosphere's primary oxidant, the hydroxyl (OH) radical as well as aerosol production and growth. Direct measurement of the total atmospheric OH reactivity (or inverse OH lifetime), in parallel with the individual BVOC can reveal insights into the coupling between biogenic emissions, atmospheric oxidation processes, canopy transport, and the OH budget. In this study we present for the first time, vertical profiles of total OH reactivity and biogenic VOCs that were monitored simultaneously throughout dry season, wet season and transition periods, from a remote tropical rainforest site in the Amazon (Amazonian Tall Tower Observatory (ATTO), S 02°08'38.8'', W 58°59'59.5'', 120 m above sea level, 150 km NE of the city of Manaus, Brazil). The profiles consisted of sequential measurements at 0.05m, 0.5m, 4 m, 12m, 24m, 38m, 53m and 79m, a single profile taking 16 minutes to complete. The measurements were made using Proton Transfer Reaction Mass Spectrometry (PTR-MS), directly in the case of BVOC and using the Comparative Reactivity Method pre-reactor for total OH reactivity. The vertical, diel and seasonal variations in total OH reactivity will be discussed. Total OH reactivity and isoprene profiles were observed to vary strongly between the seasons. Biogenic emissions from the canopy impacted the measurements as well as photo-oxidation, turbulent mixing, and deposition. Tower in the Amazon rainforest for measurements of vertical profiles of BVOCs and total OH reactivity from the forest floor, through the canopy, up to 80m.

C4 Photosynthesis in Tree Form Euphorbia Species from Hawaiian Rainforest Sites 1

PubMed Central

Pearcy, Robert W.; Troughton, John

1975-01-01

The 13C 12C isotope ratios and the leaf anatomy of 18 species and varieties of Euphorbia native to the Hawaian Islands indicated that all possess C4 photosynthesis. These species range from small prostrate coastal strand shrubs to shrubs and trees in rainforest and bog habitats. The results show that C4 photosynthesis occurs in plants from a much wider range of habitats and life-forms than has been previously reported. PMID:16659208

Postglacial expansion pathways of red mangrove, Rhizophora mangle, in the Caribbean Basin and Florida.

PubMed

Kennedy, John Paul; Pil, Maria W; Proffitt, C Edward; Boeger, Walter A; Stanford, Alice M; Devlin, Donna J

2016-02-01

The Last Glacial Maximum (LGM) was a period of massive range contraction. Post-LGM, water-dispersed coastal species, including the red mangrove (Rhizophora mangle), expanded poleward as propagules were transported by ocean currents. We assessed postglacial marine expansion pathways for R. mangle within the Caribbean Basin and Florida. Six microsatellite loci were used to genotype 237 individuals from nine R. mangle populations in the Caribbean, Florida, and Northwest Africa. We evaluated genetic variation, population structure, gene flow along alternative post-LGM expansion pathways to Florida, and potential long-distance dispersal (LDD) from West Africa to Caribbean islands. These R. mangle populations had substantial genetic structure (FST = 0.37, P < 0.0001) with three discrete population clusters (Caribbean mainland, Caribbean islands, and Florida). Genetic connectivity along the mainland pathway (Caribbean mainland to Florida) vs. limited gene dispersal along the Antilles Island pathway (Caribbean islands to Florida) supported Florida recolonization from Caribbean mainland sources. Genetic similarity of Northwest Africa and two Caribbean islands provided evidence for trans-Atlantic LDD. We did not find a pattern of decreasing genetic diversity with latitude. We outline a complex expansion history for R. mangle, with discrete pathways of recolonization for Florida and Caribbean islands. Contrary to expectation, connectivity to putative Caribbean mainland refugial populations via ocean currents, and not latitude, appears to dictate genetic diversity within Caribbean island and Florida R. mangle. These findings provide a framework for further investigation of additional water-dispersed neotropical species, and insights for management initiatives. © 2016 Botanical Society of America.

Determining the Carbon Transport Rate of an Enclosed Tropical Rainforest Ecosystem in Biosphere 2

NASA Astrophysics Data System (ADS)

Takagi, Y. A.; Van Haren, J. L.

2013-12-01

Determining how carbon moves through a tropical rainforest ecosystem is an important step towards understanding its role as a carbon sink system in the global carbon cycle. The paths by which carbon moves through forest ecosystems are reasonably well known. However, very little is known about how quickly this happens. We will present data from experiments where we isotopically pulse label the atmospheric carbon dioxide within the Biosphere 2 tropical rainforest biome with natural gas derived CO2 (∂13C ~ -40‰ vs. ~ -8.5‰ for ambient air). We are continually monitoring the CO2 concentration and isotope composition of the ambient air along a vertical profile to measure ecosystem gas exchange, and that of six branch-bag and five soil-chamber locations within the Biosphere 2 tropical rainforest, with an Aerodyne Quantum Cascade Laser to trace the labeled carbon (precision for ∂13C = 0.02‰ and CO2 = 0.07ppm, calibrated to NOAA air standards). Environmental parameters such as light, relative humidity, soil moisture, and temperature are monitored at fifteen-minute intervals. We have selected one vine species and three different tree species for branch bag enclosures at two canopy heights that we expect represent the bulk photosynthetic biomass of the rainforest. The soil chambers are distributed randomly. By treating the Biosphere 2 tropical rainforest biome, a glass enclosed ecosystem with 1900m2 of ground, 26700m3 of air, and 92 different plant species, as a model ecosystem, we anticipate to determine carbon transport rates that would otherwise be practically impossible to determine in the real world due to the difficulty of isotopically labeling and monitoring entire canopies or even individual trees, which can reach heights over 60m. The data we have collected thus far will provide a baseline comparison for the labeling data. Comparing the branch bag data with the ecosystem data has helped us determine how well small branches represent the canopy and whole ecosystem behavior. We have also determined the natural abundance ∂13C isotope fractionation rates of photosynthesis (ranging from -14‰ to -20‰, depending on the species, location within the canopy, and environmental conditions) and respiration (ranging from -25‰ to -29‰). From the lag time in the isotope signal at each location, we will derive the carbon transport rate: the time it takes for carbon to travel from the atmosphere through the carbon cycle pathways to these locations. We intend to present data from several labeling runs, which will last a week to several weeks each, depending on the lag times, especially in the soil chambers. At the conclusion of these runs, we expect to be able to propose the first experimentally derived model for tropical rainforest carbon transport rates.

A connection to deep groundwater alters ecosystem carbon fluxes and budgets: Example from a Costa Rican rainforest

DOE Office of Scientific and Technical Information (OSTI.GOV)

Genereux, David P.; Nagy, Laura A.; Osburn, Christopher L.

Field studies of watershed carbon fluxes and budgets are critical for understanding the carbon cycle, but the role of deep regional groundwater is poorly known and field examples are lacking. Here we show that discharge of regional groundwater into a lowland Costa Rican rainforest has a major influence on ecosystem carbon fluxes. Furthermore, this influence is observable through chemical, isotopic, and flux signals in groundwater, surface water, and air. Not addressing the influence of regional groundwater in the field measurement program and data analysis would give a misleading impression of the overall carbon source or sink status of the rainforest.more » In quantifying a carbon budget with the traditional "small watershed" mass-balance approach, it would be critical at this site and likely many others to consider watershed inputs or losses associated with exchange between the ecosystem and the deeper hydrogeological system on which it sits.« less

Rickettsia sp. Strain Atlantic Rainforest Infection in a Patient from a Spotted Fever-Endemic Area in Southern Brazil

PubMed Central

Krawczak, Felipe S.; Muñoz-Leal, Sebastián; Guztzazky, Ana Carolina; Oliveira, Stefan V.; Santos, Fabiana C. P.; Angerami, Rodrigo N.; Moraes-Filho, Jonas; de Souza, Julio C.; Labruna, Marcelo B.

2016-01-01

Santa Catarina State in southern Brazil is the state with the second highest number of laboratory-confirmed cases of spotted fever illness in Brazil. However, all these cases were confirmed solely by serological analysis (seroconversion to spotted fever group rickettsiae), which has not allowed identification of the rickettsial agent. Here, a clinical case of spotted fever illness from Santa Catarina is shown by seroconversion and molecular analysis to be caused by Rickettsia sp. strain Atlantic rainforest. This is the third confirmed clinical case due to this emerging rickettsial agent in Brazil. Like the previous two cases, the patient presented an inoculation eschar at the tick bite site. Our molecular diagnosis was performed on DNA extracted from the crust removed from the eschar. These results are supported by previous epidemiological studies in Santa Catarina, which showed that nearly 10% of the most common human-biting ticks were infected by Rickettsia sp. strain Atlantic rainforest. PMID:27325804

Rickettsia sp. Strain Atlantic Rainforest Infection in a Patient from a Spotted Fever-Endemic Area in Southern Brazil.

PubMed

Krawczak, Felipe S; Muñoz-Leal, Sebastián; Guztzazky, Ana Carolina; Oliveira, Stefan V; Santos, Fabiana C P; Angerami, Rodrigo N; Moraes-Filho, Jonas; de Souza, Julio C; Labruna, Marcelo B

2016-09-07

Santa Catarina State in southern Brazil is the state with the second highest number of laboratory-confirmed cases of spotted fever illness in Brazil. However, all these cases were confirmed solely by serological analysis (seroconversion to spotted fever group rickettsiae), which has not allowed identification of the rickettsial agent. Here, a clinical case of spotted fever illness from Santa Catarina is shown by seroconversion and molecular analysis to be caused by Rickettsia sp. strain Atlantic rainforest. This is the third confirmed clinical case due to this emerging rickettsial agent in Brazil. Like the previous two cases, the patient presented an inoculation eschar at the tick bite site. Our molecular diagnosis was performed on DNA extracted from the crust removed from the eschar. These results are supported by previous epidemiological studies in Santa Catarina, which showed that nearly 10% of the most common human-biting ticks were infected by Rickettsia sp. strain Atlantic rainforest. © The American Society of Tropical Medicine and Hygiene.

A connection to deep groundwater alters ecosystem carbon fluxes and budgets: Example from a Costa Rican rainforest

DOE PAGES

Genereux, David P.; Nagy, Laura A.; Osburn, Christopher L.; ...

2013-05-28

Field studies of watershed carbon fluxes and budgets are critical for understanding the carbon cycle, but the role of deep regional groundwater is poorly known and field examples are lacking. Here we show that discharge of regional groundwater into a lowland Costa Rican rainforest has a major influence on ecosystem carbon fluxes. Furthermore, this influence is observable through chemical, isotopic, and flux signals in groundwater, surface water, and air. Not addressing the influence of regional groundwater in the field measurement program and data analysis would give a misleading impression of the overall carbon source or sink status of the rainforest.more » In quantifying a carbon budget with the traditional "small watershed" mass-balance approach, it would be critical at this site and likely many others to consider watershed inputs or losses associated with exchange between the ecosystem and the deeper hydrogeological system on which it sits.« less

Molecular detection of the human pathogenic Rickettsia sp. strain Atlantic rainforest in Amblyomma dubitatum ticks from Argentina.

PubMed

Monje, Lucas D; Nava, Santiago; Eberhardt, Ayelen T; Correa, Ana I; Guglielmone, Alberto A; Beldomenico, Pablo M

2015-02-01

To date, three tick-borne pathogenic Rickettsia species have been reported in different regions of Argentina, namely, R. rickettsii, R. parkeri, and R. massiliae. However, there are no reports available for the presence of tick-borne pathogens from the northeastern region of Argentina. This study evaluated the infection with Rickettsia species of Amblyomma dubitatum ticks collected from vegetation and feeding from capybaras (Hydrochoerus hydrochaeris) in northeastern Argentina. From a total of 374 A. dubitatum ticks collected and evaluated by PCR for the presence of rickettsial DNA, 19 were positive for the presence of Rickettsia bellii DNA, two were positive for Rickettsia sp. strain COOPERI, and one was positive for the pathogenic Rickettsia sp. strain Atlantic rainforest. To our knowledge, this study is the first report of the presence of the human pathogen Rickettsia sp. strain Atlantic rainforest and Rickettsia sp. strain COOPERI in Argentina. Moreover, our findings posit A. dubitatum as a potential vector for this pathogenic strain of Rickettsia.

The role of immigrants in the assembly of the South American rainforest tree flora.

PubMed Central

Pennington, R Toby; Dick, Christopher W

2004-01-01

The Amazon lowland rainforest flora is conventionally viewed as comprising lineages that evolved in biogeographic isolation after the split of west Gondwana (ca. 100 Myr ago). Recent molecular phylogenies, however, identify immigrant lineages that arrived in South America during its period of oceanic isolation (ca. 100-3 Myr ago). Long-distance sweepstakes dispersal across oceans played an important and possibly predominant role. Stepping-stone migration from Africa and North America through hypothesized Late Cretaceous and Tertiary island chains may have facilitated immigration. An analysis of inventory plot data suggests that immigrant lineages comprise ca. 20% of both the species and individuals of an Amazon tree community in Ecuador. This is more than an order of magnitude higher than previous estimates. We also present data on the community-level similarity between South American and palaeotropical rainforests, and suggest that most taxonomic similarity derives from trans-oceanic dispersal, rather than a shared Gondwanan history. PMID:15519976

Carbon costs and benefits of Indonesian rainforest conversion to plantations.

PubMed

Guillaume, Thomas; Kotowska, Martyna M; Hertel, Dietrich; Knohl, Alexander; Krashevska, Valentyna; Murtilaksono, Kukuh; Scheu, Stefan; Kuzyakov, Yakov

2018-06-19

Land-use intensification in the tropics plays an important role in meeting global demand for agricultural commodities but generates high environmental costs. Here, we synthesize the impacts of rainforest conversion to tree plantations of increasing management intensity on carbon stocks and dynamics. Rainforests in Sumatra converted to jungle rubber, rubber, and oil palm monocultures lost 116 Mg C ha -1 , 159 Mg C ha -1 , and 174 Mg C ha -1 , respectively. Up to 21% of these carbon losses originated from belowground pools, where soil organic matter still decreases a decade after conversion. Oil palm cultivation leads to the highest carbon losses but it is the most efficient land use, providing the lowest ratio between ecosystem carbon storage loss or net primary production (NPP) decrease and yield. The imbalanced sharing of NPP between short-term human needs and maintenance of long-term ecosystem functions could compromise the ability of plantations to provide ecosystem services regulating climate, soil fertility, water, and nutrient cycles.

Scientific approach as an understanding and applications of hydrological concepts of tropical rainforest

NASA Astrophysics Data System (ADS)

Haryanto, Z.; Setyasih, I.

2018-04-01

East Kalimantan has a variety of biomes, one of which is tropical rain forests. Tropical rain forests have enormous hydrological potential, so it is necessary to provide understanding to prospective teachers. Hydrology material cannot be separated from the concept of science, for it is needed the right way of learning so students easily understand the material. This research uses descriptive method with research subject is geography education students taking hydrology course at Faculty of Teacher Training and Education, Mulawarman University. The results showed that the students were able to observe, ask question, collect data, give reason, and communicate the hydrological conditions of tropical rain forest biomes, especially related to surface ground water and groundwater conditions. Tropical rainforests are very influenced by the hydrological conditions of the region and the availability of water is affected by the forest area as a catchment area. Therefore, the tropical rainforest must be maintained in condition and its duration, so that there is no water crisis and hydrological related disasters.

Functional trait differences influence neighbourhood interactions in a hyperdiverse Amazonian forest.

PubMed

Fortunel, Claire; Valencia, Renato; Wright, S Joseph; Garwood, Nancy C; Kraft, Nathan J B

2016-09-01

As distinct community assembly processes can produce similar community patterns, assessing the ecological mechanisms promoting coexistence in hyperdiverse rainforests remains a considerable challenge. We use spatially explicit neighbourhood models of tree growth to quantify how functional trait and phylogenetic similarities predict variation in growth and crowding effects for the 315 most abundant tree species in a 25-ha lowland rainforest plot in Ecuador. We find that functional trait differences reflect variation in (1) species maximum potential growth, (2) the intensity of interspecific interactions for some species, and (3) species sensitivity to neighbours. We find that neighbours influenced tree growth in 28% of the 315 focal tree species. Neighbourhood effects are not detected in the remaining 72%, which may reflect the low statistical power to model rare taxa and/or species insensitivity to neighbours. Our results highlight the spectrum of ways in which functional trait differences can shape community dynamics in highly diverse rainforests. © 2016 John Wiley & Sons Ltd/CNRS.

Comparison of carbon uptake estimates from forest inventory and Eddy-Covariance for a montane rainforest in central Sulawesi

NASA Astrophysics Data System (ADS)

Heimsch, Florian; Kreilein, Heiner; Rauf, Abdul; Knohl, Alexander

2016-04-01

Rainforests in general and montane rainforests in particular have rarely been studied over longer time periods. We aim to provide baseline information of a montane tropical forest's carbon uptake over time in order to quantify possible losses through land-use change. Thus we conducted a re-inventory of 22 10-year old forest inventory plots, giving us a rare opportunity to quantify carbon uptake over such a long time period by traditional methods. We discuss shortfalls of such techniques and why our estimate of 1.5 Mg/ha/a should be considered as the lower boundary and not the mean carbon uptake per year. At the same location as the inventory, CO2 fluxes were measured with the Eddy-Covariance technique. Measurements were conducted at 48m height with an LI 7500 open-path infrared gas analyser. We will compare carbon uptake estimates from these measurements to those of the more conventional inventory method and discuss, which factors are probably responsible for differences.

Depth of soil water uptake by tropical rainforest trees during dry periods: does tree dimension matter?

PubMed

Stahl, Clément; Hérault, Bruno; Rossi, Vivien; Burban, Benoit; Bréchet, Claude; Bonal, Damien

2013-12-01

Though the root biomass of tropical rainforest trees is concentrated in the upper soil layers, soil water uptake by deep roots has been shown to contribute to tree transpiration. A precise evaluation of the relationship between tree dimensions and depth of water uptake would be useful in tree-based modelling approaches designed to anticipate the response of tropical rainforest ecosystems to future changes in environmental conditions. We used an innovative dual-isotope labelling approach (deuterium in surface soil and oxygen at 120-cm depth) coupled with a modelling approach to investigate the role of tree dimensions in soil water uptake in a tropical rainforest exposed to seasonal drought. We studied 65 trees of varying diameter and height and with a wide range of predawn leaf water potential (Ψpd) values. We confirmed that about half of the studied trees relied on soil water below 100-cm depth during dry periods. Ψpd was negatively correlated with depth of water extraction and can be taken as a rough proxy of this depth. Some trees showed considerable plasticity in their depth of water uptake, exhibiting an efficient adaptive strategy for water and nutrient resource acquisition. We did not find a strong relationship between tree dimensions and depth of water uptake. While tall trees preferentially extract water from layers below 100-cm depth, shorter trees show broad variations in mean depth of water uptake. This precludes the use of tree dimensions to parameterize functional models.

Phylogeography of Eastern Grey Kangaroos, Macropus giganteus, Suggests a Mesic Refugium in Eastern Australia.

PubMed

Coghlan, Brett A; Goldizen, Anne W; Thomson, Vicki A; Seddon, Jennifer M

2015-01-01

Phylogeographic studies around the world have identified refugia where fauna were able to persist during unsuitable climatic periods, particularly during times of glaciation. In Australia the effects of Pleistocene climate oscillations on rainforest taxa have been well studied but less is known about the effects on mesic-habitat fauna, such as the eastern grey kangaroo (Macropus giganteus). The eastern grey kangaroo is a large mammal that is common and widespread throughout eastern Australia, preferring dry mesic habitat, rather than rainforest. As pollen evidence suggests that the central-eastern part of Australia (southeast Queensland and northern New South Wales) experienced cycles of expansion in mesic habitat with contraction in rainforests, and vice versa during glacial and interglacial periods, respectively, we hypothesise that the distribution of the eastern grey kangaroo was affected by these climate oscillations and may have contracted to mesic habitat refugia. From 375 mitochondrial DNA control region sequences from across the distribution of eastern grey kangaroos we obtained 108 unique haplotypes. Phylogenetic analysis identified two clades in Queensland, one of which is newly identified and restricted to a small coastal region in southern Queensland north of Brisbane, known as the Sunshine Coast. The relatively limited geographic range of this genetically isolated clade suggests the possibility of a mesic habitat refugium forming during rainforest expansion during wetter climate cycles. Other potential, although less likely, reasons for the genetic isolation of the highly distinct clade include geographic barriers, separate northward expansions, and strong local adaptation.

Contrasting Diversity and Host Association of Ectomycorrhizal Basidiomycetes versus Root-Associated Ascomycetes in a Dipterocarp Rainforest

PubMed Central

Sato, Hirotoshi; Tanabe, Akifumi S.; Toju, Hirokazu

2015-01-01

Root-associated fungi, including ectomycorrhizal and root-endophytic fungi, are among the most diverse and important belowground plant symbionts in dipterocarp rainforests. Our study aimed to reveal the biodiversity, host association, and community structure of ectomycorrhizal Basidiomycota and root-associated Ascomycota (including root-endophytic Ascomycota) in a lowland dipterocarp rainforest in Southeast Asia. The host plant chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) region and fungal internal transcribed spacer 2 (ITS2) region were sequenced using tag-encoded, massively parallel 454 pyrosequencing to identify host plant and root-associated fungal taxa in root samples. In total, 1245 ascomycetous and 127 putative ectomycorrhizal basidiomycetous taxa were detected from 442 root samples. The putative ectomycorrhizal Basidiomycota were likely to be associated with closely related dipterocarp taxa to greater or lesser extents, whereas host association patterns of the root-associated Ascomycota were much less distinct. The community structure of the putative ectomycorrhizal Basidiomycota was possibly more influenced by host genetic distances than was that of the root-associated Ascomycota. This study also indicated that in dipterocarp rainforests, root-associated Ascomycota were characterized by high biodiversity and indistinct host association patterns, whereas ectomycorrhizal Basidiomycota showed less biodiversity and a strong host phylogenetic preference for dipterocarp trees. Our findings lead to the working hypothesis that root-associated Ascomycota, which might be mainly represented by root-endophytic fungi, have biodiversity hotspots in the tropics, whereas biodiversity of ectomycorrhizal Basidiomycota increases with host genetic diversity. PMID:25884708

Pollen dispersal of tropical trees (Dinizia excelsa: Fabaceae) by native insects and African honeybees in pristine and fragmented Amazonian rainforest.

PubMed

Dick, Christopher W; Etchelecu, Gabriela; Austerlitz, Frédéric

2003-03-01

Tropical rainforest trees typically occur in low population densities and rely on animals for cross-pollination. It is of conservation interest therefore to understand how rainforest fragmentation may alter the pollination and breeding structure of remnant trees. Previous studies of the Amazonian tree Dinizia excelsa (Fabaceae) found African honeybees (Apis mellifera scutellata) as the predominant pollinators of trees in highly disturbed habitats, transporting pollen up to 3.2 km between pasture trees. Here, using microsatellite genotypes of seed arrays, we compare outcrossing rates and pollen dispersal distances of (i) remnant D. excelsa in three large ranches, and (ii) a population in undisturbed forest in which African honeybees were absent. Self-fertilization was more frequent in the disturbed habitats (14%, n = 277 seeds from 12 mothers) than in undisturbed forest (10%, n = 295 seeds from 13 mothers). Pollen dispersal was extensive in all three ranches compared to undisturbed forest, however. Using a twogener analysis, we estimated a mean pollen dispersal distance of 1509 m in Colosso ranch, assuming an exponential dispersal function, and 212 m in undisturbed forest. The low effective density of D. excelsa in undisturbed forest (approximately 0.1 trees/ha) indicates that large areas of rainforest must be preserved to maintain minimum viable populations. Our results also suggest, however, that in highly disturbed habitats Apis mellifera may expand genetic neighbourhood areas, thereby linking fragmented and continuous forest populations.

Soil phosphorus heterogeneity promotes tree species diversity and phylogenetic clustering in a tropical seasonal rainforest.

PubMed

Xu, Wumei; Ci, Xiuqin; Song, Caiyun; He, Tianhua; Zhang, Wenfu; Li, Qiaoming; Li, Jie

2016-12-01

The niche theory predicts that environmental heterogeneity and species diversity are positively correlated in tropical forests, whereas the neutral theory suggests that stochastic processes are more important in determining species diversity. This study sought to investigate the effects of soil nutrient (nitrogen and phosphorus) heterogeneity on tree species diversity in the Xishuangbanna tropical seasonal rainforest in southwestern China. Thirty-nine plots of 400 m 2 (20 × 20 m) were randomly located in the Xishuangbanna tropical seasonal rainforest. Within each plot, soil nutrient (nitrogen and phosphorus) availability and heterogeneity, tree species diversity, and community phylogenetic structure were measured. Soil phosphorus heterogeneity and tree species diversity in each plot were positively correlated, while phosphorus availability and tree species diversity were not. The trees in plots with low soil phosphorus heterogeneity were phylogenetically overdispersed, while the phylogenetic structure of trees within the plots became clustered as heterogeneity increased. Neither nitrogen availability nor its heterogeneity was correlated to tree species diversity or the phylogenetic structure of trees within the plots. The interspecific competition in the forest plots with low soil phosphorus heterogeneity could lead to an overdispersed community. However, as heterogeneity increase, more closely related species may be able to coexist together and lead to a clustered community. Our results indicate that soil phosphorus heterogeneity significantly affects tree diversity in the Xishuangbanna tropical seasonal rainforest, suggesting that deterministic processes are dominant in this tropical forest assembly.

Contextualising impacts of logging on tropical rainforest catchment sediment dynamics using the stratigraphic record of in-channel bench deposits

NASA Astrophysics Data System (ADS)

Blake, Will; Walsh, Rory; Bidin, Kawi; Annammala, Kogila

2015-04-01

It is widely recognised that commercial logging and conversion of tropical rainforest to oil palm plantation leads to enhanced fluvial sediment flux to the coastal zone but the dynamics of delivery and mechanisms that act to retain sediment and nutrients within rainforest ecosystems, e.g. riparian zone and floodplain storage, are poorly understood and underexploited as a management tool. While accretion of lateral in-channel bench deposits in response to forest clearance has been demonstrated in temperate landscapes, their development and value as sedimentary archives of catchment response to human disturbance remains largely unexplored in tropical rainforest river systems. Working within the Segama River basin, Sabah, Malaysian Borneo, this study aimed to test the hypothesis that (1) lateral bench development in tropical rainforest rivers systems is enhanced by upstream catchment disturbance and that (2) the sedimentary record of these deposits can be used to infer changes in sediment provenance and intensification of sediment flux associated with logging activities. Sediment cores were taken from in-channel bench deposits with upstream catchment contributing areas of 721 km2 and 2800 km2 respectively. Accretion rates were determined using fallout 210Pb and 137Cs and the timing of peak accumulation was shown to correspond exactly with the known temporal pattern of logging and associated fluvial sediment response over the period 1980 to present following low pre-logging rates. Major and minor element geochemistry of deposits was used to assess the degree of weathering that deposited sediment had experienced. This was linked to surface (heavily weathered) and subsurface (less weathered) sediment sources relating to initial disturbance by logging and post-logging landsliding responses respectively. A shift in the dominant source of deposited material from surface (i.e. topsoil) to subsurface (i.e. relatively unweathered subsoil close to bedrock) origin was observed to coincide with the increase in accretion rates following logging of steep headwater slopes. Coherence of sedimentary, monitoring and observational evidence demonstrates that in-channel bench deposits offer a previously unexplored sedimentary archive of catchment response to logging in tropical rainforest systems and a tool for evaluating the erosional responses of ungauged basins. In-channel bench development due to catchment disturbance may augment ecosystem services provided by the riparian corridors of larger rivers and process knowledge gained from sedimentary archives can be used to underpin future riparian and catchment forest management strategies.

The hyper-diverse ant genus Tetramorium Mayr (Hymenoptera, Formicidae) in the Malagasy region taxonomic revision of the T. naganum, T. plesiarum, T. schaufussii, and T. severini species groups

PubMed Central

Hita Garcia, Francisco; Fisher, Brian L.

2014-01-01

Abstract The taxonomy of the Tetramorium naganum, T. plesiarum, T. schaufussii, and T. severini species groups are revised for the Malagasy region. A total of 31 species are treated, of which 22 are newly described and nine redescribed. This increases the richness of the hyper-diverse genus Tetramorium in the Malagasy region to 106 species, which makes it the most species-rich genus in the region. Twenty-nine of the treated species are endemic to Madagascar, one is endemic to the Comoros, and one species is found predominantly in Madagascar but also on the island of Reunion. The T. naganum species group contains five species, which are mainly distributed in the rainforests and montane rainforests of eastern and northern Madagascar: T. alperti sp. n., T. dalek sp. n., T. enkidu sp. n., T. gilgamesh sp. n., and T. naganum Bolton, 1979. The T. plesiarum species group holds five species: T. bressleri sp. n., T. hobbit sp. n., T. gollum sp. n., T. mars sp. n., and T. plesiarum Bolton, 1979. All five are arid-adapted species occurring in the southwest and west of Madagascar. The second-most species-rich group in the region is the T. schaufussii species group with 20 species, most of which inhabit rainforests or montane rainforests of eastern and northern Madagascar. This group includes two species complexes each containing ten species: the T. cognatum complex with the species T. aspis sp. n., T. camelliae sp. n., T. cognatum Bolton, 1979, T. freya sp. n., T. gladius sp. n., T. karthala sp. n., T. myrmidon sp. n., T. proximum Bolton, 1979, T. rumo sp. n., and T. tenuinode sp. n.; and the T. schaufussii complex with the species T. merina sp. n., T. monticola sp. n., T. nassonowii Forel, 1892 stat. n., T. obiwan sp. n., T. pseudogladius sp. n., T. rala sp. n., T. schaufussii Forel, 1891, T. sikorae Forel, 1892 (= T. latior (Santschi, 1926)), T. scutum sp. n., T. xanthogaster Santschi, 1911. The last group treated in this study is the T. severini species group, which contains only the species T. severini (Emery, 1895). This very conspicuous species is widely distributed in the rainforests and montane rainforests of eastern and northern Madagascar. All four groups are fully revised with group diagnoses, illustrated species-level identification keys, and detailed descriptions for all species that include multifocused montage images and distribution maps. PMID:25009414

Vegetation and climate variability in tropical and subtropical South America during the late Quaternary

NASA Astrophysics Data System (ADS)

Behling, H.

2013-05-01

Detailed palynological studies from different ecosystems in tropical and subtropical South America reflect interesting vegetation and climate dynamics, in particular during glacial and late glacial times. Records from ecosystems such as the Amazon rainforest, savanna, Caatinga, Atlantic rainforest, Araucaria forest and grasslands provide interesting insight of past climate variability. The influence of events such as Dansgaard-Oeschger, Heinnrich stadials, changes in the thermohaline circulation (THC) will be discussed. In particular the Younger Dryas (YD) period shows at different places distinct vegetational changes, revealing unexpected past climatic conditions.

A new species of Phyllodytes (Anura: Hylidae) from the Atlantic Rainforest of southern Bahia, Brazil.

PubMed

Vörös, Judit; Dias, Iuri Ribeiro; Solé, Mirco

2017-10-20

We describe Phyllodytes amadoi sp. nov., a species of treefrog from the Atlantic Rainforest of southern Bahia, Brazil. The new species can be diagnosed by its small body size (SVL 15.6-23.0 mm) and advertisement call with high dominant frequency (3.789-4.306 Hz). It is known from one locality in the Private Reserve of Natural Heritage Ararauna, in the municipality of Una (15° 18' 38.3" S, 39° 9' 55.9" W, 96 m a.s.l.).

New species of Microcentrum Scudder, 1862 (Orthoptera: Tettigonioidea: Phaneropteridae) from Amazon rainforest.

PubMed

Da Silva Sovano, Rafael S; Cadena-Castañeda, Oscar J

2015-03-26

A regional study is performed for the Amazonian species of the genus Microcentrum Scudder, 1862, its proposed Microcentrum punctifrons Brunner von Wattenwyl, 1891 as nomen dubium n. stat. and two new species are described: Microcentrum amacayacu Cadena-Casteñada, Sovano n. sp. and Microcentrum xavieri Sovano, Cadena-Casteñada n. sp. the Colombian and Brazilian Amazon, respectively. A list and a key to the Amazonian species are also provided, along with a discussion on their distribution, according to endemism areas established to Amazon rainforest.

Incidence of Fusarium moniliforme Sheld. in Zea mays L. in the rainforest zone of Nigeria.

PubMed

Iloba, C

1979-01-01

45 seed samples from 7 states of the rainforest zone of Nigeria (Ogun, Ondo, Oyo, Bendel, Anambra, Imo, and Cross River) were screened for phytopathogen incidence. Whereas Drechslera maydis was found in 30 and Cephalosporium maydis in 79% of the samples were infected by Fusarium moniliforme, with 70% of the samples showing heavy infection. In view of the widespread nature of this economically important fungus on maize in the main cultivation area of Nigeria, the necessity for routine laboratory seed health tests is clearly indicated.

Simulating Forest Dynamics of Lowland Rainforests in Eastern Madagascar

NASA Technical Reports Server (NTRS)

Armstrong, Amanda; Fischer, Rico; Huth, Andreas; Shugart, Herman; Fatoyinbo, Temilola

2018-01-01

Ecological modeling and forecasting are essential tools for the understanding of complex vegetation dynamics. The parametric demands of some of these models are often lacking or scant for threatened ecosystems, particularly in diverse tropical ecosystems. One such ecosystem and also one of the world's biodiversity hotspots, Madagascar's lowland rainforests, have disappeared at an alarming rate. The processes that drive tree species growth and distribution remain as poorly understood as the species themselves. We investigated the application of the process-based individual-based FORMIND model to successfully simulate a Madagascar lowland rainforest using previously collected multi-year forest inventory plot data. We inspected the model's ability to characterize growth and species abundance distributions over the study site, and then validated the model with an independently collected forest-inventory dataset from another lowland rainforest in eastern Madagascar. Following a comparative analysis using inventory data from the two study sites, we found that FORMIND accurately captures the structure and biomass of the study forest, with r(squared) values of 0.976, 0.895, and 0.995 for 1:1 lines comparing observed and simulated values across all plant functional types for aboveground biomass (tonnes/ha), stem numbers, and basal area (m(squared)/ha), respectively. Further, in validation with a second study forest site, FORMIND also compared well, only slightly over-estimating shade-intermediate species as compared to the study site, and slightly under-representing shade-tolerant species in percentage of total aboveground biomass. As an important application of the FORMIND model, we measured the net ecosystem exchange (NEE, in tons of carbon per hectare per year) for 50 ha of simulated forest over a 1000-year run from bare ground. We found that NEE values ranged between 1 and -1 t Cha(exp -1)year(exp -1), consequently the study forest can be considered as a net neutral or a very slight carbon sink ecosystem, after the initial 130 years of growth. Our study found that FORMIND represents a valuable tool toward simulating forest dynamics in the immensely diverse Madagascar rainforests.

Contribution of aboveground plant respiration to carbon cycling in a Bornean tropical rainforet

NASA Astrophysics Data System (ADS)

Katayama, Ayumi; Tanaka, Kenzo; Ichie, Tomoaki; Kume, Tomonori; Matsumoto, Kazuho; Ohashi, Mizue; Kumagai, Tomo'omi

2014-05-01

Bornean tropical rainforests have a different characteristic from Amazonian tropical rainforests, that is, larger aboveground biomass caused by higher stand density of large trees. Larger biomass may cause different carbon cycling and allocation pattern. However, there are fewer studies on carbon allocation and each component in Bornean tropical rainforests, especially for aboveground plant respiration, compared to Amazonian forests. In this study, we measured woody tissue respiration and leaf respiration, and estimated those in ecosystem scale in a Bornean tropical rainforest. Then, we examined carbon allocation using the data of soil respiration and aboveground net primary production obtained from our previous studies. Woody tissue respiration rate was positively correlated with diameter at breast height (dbh) and stem growth rate. Using the relationships and biomass data, we estimated woody tissue respiration in ecosystem scale though methods of scaling resulted in different estimates values (4.52 - 9.33 MgC ha-1 yr-1). Woody tissue respiration based on surface area (8.88 MgC ha-1 yr-1) was larger than those in Amazon because of large aboveground biomass (563.0 Mg ha-1). Leaf respiration rate was positively correlated with height. Using the relationship and leaf area density data at each 5-m height, leaf respiration in ecosystem scale was estimated (9.46 MgC ha-1 yr-1), which was similar to those in Amazon because of comparable LAI (5.8 m2 m-2). Gross primary production estimated from biometric measurements (44.81 MgC ha-1 yr-1) was much higher than those in Amazon, and more carbon was allocated to woody tissue respiration and total belowground carbon flux. Large tree with dbh > 60cm accounted for about half of aboveground biomass and aboveground biomass increment. Soil respiration was also related to position of large trees, resulting in high soil respiration rate in this study site. Photosynthesis ability of top canopy for large trees was high and leaves for the large trees accounted for 30% of total, which can lead high GPP. These results suggest that large trees play considerable role in carbon cycling and make a distinctive carbon allocation in the Bornean tropical rainforest.

Long-term responses of rainforest erosional systems at different spatial scales to selective logging and climatic change.

PubMed

Walsh, R P D; Bidin, K; Blake, W H; Chappell, N A; Clarke, M A; Douglas, I; Ghazali, R; Sayer, A M; Suhaimi, J; Tych, W; Annammala, K V

2011-11-27

Long-term (21-30 years) erosional responses of rainforest terrain in the Upper Segama catchment, Sabah, to selective logging are assessed at slope, small and large catchment scales. In the 0.44 km(2) Baru catchment, slope erosion measurements over 1990-2010 and sediment fingerprinting indicate that sediment sources 21 years after logging in 1989 are mainly road-linked, including fresh landslips and gullying of scars and toe deposits of 1994-1996 landslides. Analysis and modelling of 5-15 min stream-suspended sediment and discharge data demonstrate a reduction in storm-sediment response between 1996 and 2009, but not yet to pre-logging levels. An unmixing model using bed-sediment geochemical data indicates that 49 per cent of the 216 t km(-2) a(-1) 2009 sediment yield comes from 10 per cent of its area affected by road-linked landslides. Fallout (210)Pb and (137)Cs values from a lateral bench core indicate that sedimentation rates in the 721 km(2) Upper Segama catchment less than doubled with initially highly selective, low-slope logging in the 1980s, but rose 7-13 times when steep terrain was logged in 1992-1993 and 1999-2000. The need to keep steeplands under forest is emphasized if landsliding associated with current and predicted rises in extreme rainstorm magnitude-frequency is to be reduced in scale.

Drought and tree mortality in tropical rainforest: understanding and differentiating functional responses

NASA Astrophysics Data System (ADS)

Meir, P.; Rowland, L.; da Costa, A. C. L.; Mencuccini, M.; Oliveira, A.; Binks, O.; Christoffersen, B. O.; Eliane, M.; Vasconcelos, S.; Kruijt, B.; Ferreira, L.

2014-12-01

Our understanding of how forests respond to drought is especially constrained with respect to widespread tree mortality events. This limitation is particularly clear for tropical forests, despite the risk of drought to these ecosystems during the coming decades. We present new findings from the only current long-term 'ecosystem-scale' (1 ha) rainfall manipulation experiment in tropical rainforest, the Esecaflor experiment at Caxiuana National Forest, Para State, Brazil. Throughfall has been partially excluded from experimental forest at the Esecaflor experiment for more than a decade. We have previously demonstrated a capacity to model short-term physiological responses well, but longer term physiology and ecological dynamics remain challenging to understand and represent. In particular, high mortality and increased autotrophic respiration following extended drought are poorly understood phenomena, and their interaction with hydraulic responses and limitations needs to be characterised. We present initial data that for the first time combine carbon use and hydraulic metrics, comparing drought-vulnerable and non-vulnerable species that have experienced extended soil moisture deficit, as imposed in the experiment, also considering the response in soil respiration. We also discuss how these findings can be used to develop future empirical and modelling studies aimed at improving our capacity to predict the effects of drought on tropical forest ecosystems in Amazonia and in other tropical forest regions where species characteristics and environmental constraints may influence both short and long-term responses to drought.

Kerteszia Theobald (Diptera: Culicidae) mosquitoes and bromeliads: A landscape ecology approach regarding two species in the Atlantic rainforest.

PubMed

Chaves, Leonardo Suveges Moreira; Rodrigues de Sá, Ivy Luizi; Bergamaschi, Denise Pimentel; Sallum, Maria Anice Mureb

2016-12-01

On the ecological scale of an organism, a homogeneous geographical landscape can represent a mosaic of heterogeneous landscapes. The bionomy of Kerteszia mosquitoes can contribute to foundation landscape ecology by virtue of in the role of the configuration and composition of the habitat played in the distribution of mosquito species. Thus, this study aimed: to compare the abundance of Kerteszia in dense tropical rainforest, restinga and rural area, to assess the bioecological characteristics of the main bromeliads hosting Kerteszia, and to associate the bioecological arrangement of the bromeliads with Kerteszia distribution. Field collections were conducted in a monthly schedule from December of 2010 to November 2011. The vegetation of landscapes was characterized on the basis of a digital cartographic database, the manual of the Brazilian vegetation, environmental atlas information, satellite images and visits to the sites. Multivariate generalized linear models were employed using the R-project statistical program. The results were: Anopheles cruzii was the most frequent species in dense tropical rainforest (67.42%), with a positive association (deviance=25.8; P=0.002). Anopheles bellator was more abundant in the Restinga area (78.97%), with a positive association (deviance=10.4, P=0.018). There was a positive aggregation of Restinga with An. bellator (RR=2.42) but a lower level with An. cruzii (RR=0.31). Thus we can conclude that landscape characteristics influence the distribution of Kerteszia mosquitoes. An. bellator has a higher prevalence in Restinga areas, whereas An. cruzii was the most prevalent in the dense tropical rainforest. Copyright © 2016 Elsevier B.V. All rights reserved.

How might Australian rainforest cloud interception respond to climate change?

NASA Astrophysics Data System (ADS)

Wallace, Jim; McJannet, Dave

2013-02-01

SummaryThe lower and upper montane rainforests in northern Queensland receive significant amounts of cloud interception that affect both in situ canopy wetness and downstream runoff. Cloud interception contributes 5-30% of the annual water input to the canopy and this increases to 40-70% of the monthly water input during the dry season. This occult water is therefore an important input to the canopy, sustaining the epiphytes, mosses and other species that depend on wet canopy conditions. The potential effect of climate change on cloud interception was examined using the relationship between cloud interception and cloud frequency derived from measurements made at four different rainforest locations. Any given change in cloud frequency produces a greater change in cloud interception and this 'amplification' increases from 1.1 to 1.7 as cloud frequency increases from 5% to 70%. This means that any changes in cloud frequency will have the greatest relative effects at the higher altitude sites where cloud interception is greatest. As cloud frequency is also a major factor affecting canopy wetness, any given change in cloud frequency will therefore have a greater impact on canopy wetness at the higher altitude sites. These changes in wetness duration will augment those due to changes in rainfall and may have important implications for the fauna and flora that depend on wet canopy conditions. We also found that the Australian rainforests may be more efficient (by ˜50% on average) in intercepting cloud water than American coniferous forests, which may be due to differences in canopy structure and exposure at the different sites.

Fluxes of isoprene and monoterpenes emitted by Tapajos National Forest, eastern central Amazonian rainforest, Santarem-PA, Brazil

NASA Astrophysics Data System (ADS)

Alves, E. G.; Batalha, S. S. A.; Park, J. H.; Seco, R.; Tota, J.; Santana, R. A. S. D.; Guenther, A. B.; Kim, S.; Smith, J. N.; Souza, R. A. F. D.

2014-12-01

Biogenic Volatile Organic Compounds (BVOCs) play an important role in atmospheric chemistry and biogeochemical cycles. It is known that tropical forests are the biggest source of the dominant BVOCs (i.e. isoprene and monoterpenes) emitted to the atmosphere. Nevertheless, Amazonian rainforest, the world's largest tropical rainforest, has been poorly explored for isoprene and monoterpene emissions. Recently (June and July 2014), we deployed a PTR-TOF-MS (Proton Transfer Reaction - Time of Flight - Mass Spectrometer) to quantify isoprene and monoterpene emissions using the eddy covariance flux method at the FLONA Tapajos (Floresta Nacional do Tapajos; Tapajos National Forest) in the eastern central Amazon rainforest, Santarem-PA, Brazil. The sample inlet and a 3D-sonic anemometer were located above the forest canopy (~65m), and the air was sampled through a long Teflon tube (100m) with high flow rate (40L/min) to the PTR-TOF-MS. From preliminary results for the first 3 days, concentrations and fluxes of m/z 69 (isoprene; C5H8-H+) and m/z 137 (total monoterpenes; C10H16-H+) showed a clear circadian cycle (high during daytime and low at nighttime), suggesting the emissions of these compounds are light and temperature dependent. Our study provides the first PTR-TOF-MS flux observations of isoprene and total monoterpenes at the Flona Tapajos. Moreover, since there are variations on the emissions, when comparing different environments of the huge Amazon basin, these results from eastern central Amazonia will contribute to improving regional and global BVOC emission model estimates.

Unveiling the diet of elusive rainforest herbivores in next generation sequencing era? The tapir as a case study.

PubMed

Hibert, Fabrice; Taberlet, Pierre; Chave, Jérôme; Scotti-Saintagne, Caroline; Sabatier, Daniel; Richard-Hansen, Cécile

2013-01-01

Characterizing the trophic relationships between large herbivores and the outstanding plant diversity in rainforest is a major challenge because of their elusiveness. This is crucial to understand the role of these herbivores in the functioning of the rainforest ecosystems. We tested a non-invasive approach based on the high-throughput sequencing of environmental samples using small plant plastid sequences (the trnL P6 loop) and ribosomal ITS1 primers, referred to as DNA metabarcoding, to investigate the diet of the largest neotropical herbivore, the lowland tapir. Sequencing was performed on plant DNA extracted from tapir faeces collected at the Nouragues station, a protected area of French Guiana. In spite of a limited sampling, our approach reliably provided information about the lowland tapir's diet at this site. Indeed, 95.1% and 74.4% of the plant families and genera identified thanks to the trnL P6 loop, respectively, matched with taxa already known to be consumed by tapirs. With this approach we were able to show that two families and eight new genera are also consumed by the lowland tapir. The taxonomic resolution of this method is limited to the plant family and genera. Complementary barcodes, such as a small portion of ITS1, can be used to efficiently narrow identifications down to the species in some problematic families. We will discuss the remaining limitations of this approach and how useful it is at this stage to unravel the diet of elusive rainforest herbivores and better understand their role as engineers of the ecosystem.

Unveiling the Diet of Elusive Rainforest Herbivores in Next Generation Sequencing Era? The Tapir as a Case Study

PubMed Central

Hibert, Fabrice; Taberlet, Pierre; Chave, Jérôme; Scotti-Saintagne, Caroline; Sabatier, Daniel; Richard-Hansen, Cécile

2013-01-01

Characterizing the trophic relationships between large herbivores and the outstanding plant diversity in rainforest is a major challenge because of their elusiveness. This is crucial to understand the role of these herbivores in the functioning of the rainforest ecosystems. We tested a non-invasive approach based on the high-throughput sequencing of environmental samples using small plant plastid sequences (the trnL P6 loop) and ribosomal ITS1 primers, referred to as DNA metabarcoding, to investigate the diet of the largest neotropical herbivore, the lowland tapir. Sequencing was performed on plant DNA extracted from tapir faeces collected at the Nouragues station, a protected area of French Guiana. In spite of a limited sampling, our approach reliably provided information about the lowland tapir's diet at this site. Indeed, 95.1% and 74.4% of the plant families and genera identified thanks to the trnL P6 loop, respectively, matched with taxa already known to be consumed by tapirs. With this approach we were able to show that two families and eight new genera are also consumed by the lowland tapir. The taxonomic resolution of this method is limited to the plant family and genera. Complementary barcodes, such as a small portion of ITS1, can be used to efficiently narrow identifications down to the species in some problematic families. We will discuss the remaining limitations of this approach and how useful it is at this stage to unravel the diet of elusive rainforest herbivores and better understand their role as engineers of the ecosystem. PMID:23560107

Estimate of fine root production including the impact of decomposed roots in a Bornean tropical rainforest

NASA Astrophysics Data System (ADS)

Katayama, Ayumi; Khoon Koh, Lip; Kume, Tomonori; Makita, Naoki; Matsumoto, Kazuho; Ohashi, Mizue

2016-04-01

Considerable carbon is allocated belowground and used for respiration and production of roots. It is reported that approximately 40 % of GPP is allocated belowground in a Bornean tropical rainforest, which is much higher than those in Neotropical rainforests. This may be caused by high root production in this forest. Ingrowth core is a popular method for estimating fine root production, but recent study by Osawa et al. (2012) showed potential underestimates of this method because of the lack of consideration of the impact of decomposed roots. It is important to estimate fine root production with consideration for the decomposed roots, especially in tropics where decomposition rate is higher than other regions. Therefore, objective of this study is to estimate fine root production with consideration of decomposed roots using ingrowth cores and root litter-bag in the tropical rainforest. The study was conducted in Lambir Hills National Park in Borneo. Ingrowth cores and litter bags for fine roots were buried in March 2013. Eighteen ingrowth cores and 27 litter bags were collected in May, September 2013, March 2014 and March 2015, respectively. Fine root production was comparable to aboveground biomass increment and litterfall amount, and accounted only 10% of GPP in this study site, suggesting most of the carbon allocated to belowground might be used for other purposes. Fine root production was comparable to those in Neotropics. Decomposed roots accounted for 18% of fine root production. This result suggests that no consideration of decomposed fine roots may cause underestimate of fine root production.

A process-based investigation into the impact of the Congo basin deforestation on surface climate

NASA Astrophysics Data System (ADS)

Bell, Jean P.; Tompkins, Adrian M.; Bouka-Biona, Clobite; Sanda, I. Seidou

2015-06-01

The sensitivity of climate to the loss of the Congo basin rainforest through changes in land cover properties is examined using a regional climate model. The complete removal of the Congo basin rainforest results in a dipole rainfall anomaly pattern, characterized by a decrease (˜-42%) in rainfall over the western Congo and an increase (˜10%) in the basin's eastern part. Three further experiments systematically examine the individual response to the changes in albedo, surface roughness, and evapotranspiration efficiency that accompany deforestation. The increased albedo (˜) caused by the Congo basin rainforest clearance results in cooler and drier climate conditions over the entire basin. The drying is accompanied with a reduction in available surface energy. Reducing evapotranspiration efficiency or roughness length produces similar positive air temperature anomaly patterns. The decreased evapotranspiration efficiency leads to a dipole response in rainfall, similar to that resulting from a reduced surface roughness following Congo basin rainforest clearance. This precipitation anomaly pattern is strongly linked to the change in low-level water vapor transport, the influence of the Rift valley highlands, and the spatial pattern of water recycling activity. The climate responds linearly to the separate albedo, surface roughness, and evapotranspiration efficiency changes, which can be summed to produce a close approximation to the impact of the full deforestation experiment. It is suggested that the widely contrasting climate responses to deforestation in the literature could be partly due to the relative magnitude of change of the radiative and nonradiative parameterizations in their respective land surface schemes.

Ecological legacies of Indigenous fire management in high-latitude coastal temperate rainforests, Canada

NASA Astrophysics Data System (ADS)

Hoffman, K.; Lertzman, K. P.; Starzomski, B. M.

2016-12-01

Anthropogenic burning is considered to have little impact on coastal temperate rainforest fire regimes in the Pacific Northwest (PNW) of North America, yet few long-term fire histories have been reconstructed in these forests. We use a multidisciplinary approach to reconstruct the ecological impact, scale, and legacies of historic fire regime variability in high-latitude coastal temperate rainforests located in British Columbia, Canada. We map seven centuries of fire activity with fire scars and records of stand establishment, and examine patterns in the distribution and composition of vegetation to assess whether fire was historically used as a tool for resource management. We conduct a paired study of 20 former Indigenous habitation and control sites across a 100 km2 island group to relate historic fire activity with long-term patterns of human land use and contemporary lightning strike densities. Fires were significantly associated with the locations of former Indigenous habitation sites, low and mixed in severity, and likely intentionally used to influence the composition and structure of vegetation, thus increasing the productivity of culturally important plants such as western redcedar, berry-producing shrubs, and bracken fern. Centuries of repeated anthropogenic burning have resulted in a mosaic of vegetation types in different stages of succession. These data are directly relevant to the management of contemporary forests as they do not support the widespread contention that old growth coastal temperate rainforests in this region are pristine landscapes where fire is rare, but more likely the result of long-term human land use practices.

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities

PubMed Central

Rodrigues, Jorge L. M.; Pellizari, Vivian H.; Mueller, Rebecca; Baek, Kyunghwa; Jesus, Ederson da C.; Paula, Fabiana S.; Mirza, Babur; Hamaoui, George S.; Tsai, Siu Mui; Feigl, Brigitte; Tiedje, James M.; Bohannan, Brendan J. M.; Nüsslein, Klaus

2013-01-01

The Amazon rainforest is the Earth’s largest reservoir of plant and animal diversity, and it has been subjected to especially high rates of land use change, primarily to cattle pasture. This conversion has had a strongly negative effect on biological diversity, reducing the number of plant and animal species and homogenizing communities. We report here that microbial biodiversity also responds strongly to conversion of the Amazon rainforest, but in a manner different from plants and animals. Local taxonomic and phylogenetic diversity of soil bacteria increases after conversion, but communities become more similar across space. This homogenization is driven by the loss of forest soil bacteria with restricted ranges (endemics) and results in a net loss of diversity. This study shows homogenization of microbial communities in response to human activities. Given that soil microbes represent the majority of biodiversity in terrestrial ecosystems and are intimately involved in ecosystem functions, we argue that microbial biodiversity loss should be taken into account when assessing the impact of land use change in tropical forests. PMID:23271810

The elytra-to-body binding mechanism of the flightless rainforest species Tabarus montanus Kaszab (Coleoptera: Tenebrionidea).

PubMed

Bouchard, P; Gorb, S N

2000-01-01

The elytra-to-body binding mechanism of the flightless rainforest species Tabarus montanus Kaszab (Coleoptera: Tenebrionidea) is described. Previously, studies on this complex character system in tenebrionids have focused mostly on either fully-winged or flightless, desert-dwelling species with a hermetically sealed subelytral cavity. Data presented here show that the rainforest species Ta. montanus has permanently joined interlocking macrostructures between the two elytra along the midline and between the elytral epipleuron and the sides of the body. These are very similar adaptations to ones found in flightless desert tenebrionids. Frictional patches of microtrichia, previously reported in all wing-folding beetle suborders including flightless taxa, are completely absent in Ta. montanus. This constitutes the first report of the complete loss of frictional microtrichia patches in a beetle with fully-developed elytra. Sensory organs (hair sensilla), usually involved in the correct positioning of the elytra over the beetles' body at rest are also absent in Ta. montanus. The significance of these results relating to the evolution of the tenebrionid subelytral cavity is discussed.

Genetic identification of Rickettsia sp. strain Atlantic rainforest in an endemic area of a mild spotted fever in Rio Grande do Sul state, Southern Brazil.

PubMed

Figueiredo Voizzoni, Vinicius; Barbosa Silva, Arannadia; Medeiros Cardoso, Karen; Barbosa Dos Santos, Fernanda; Stenzel, Barbara; Amorim, Marinete; Vilges de Oliveira, Stefan; Salles Gazeta, Gilberto

2016-10-01

Rickettsia sp. strain Atlantic rainforest causes a less severe rickettsiosis, with two cases confirmed until now. The tick species Amblyomma ovale is appointed as the main vector of this bacterium. The southern region of Brazil has reported patients with spotted fever who have milder symptoms. In 2013, during an investigation of rickettsiosis cases, an A. ovale tick was found attached to a man in an area where there were two cases. The parasite was processed for molecular analysis and the rickettsial infection was confirmed based on phylogenetic analysis of genes ompA, ompB and geneD (sca4). In the present study the human pathogenic Rickettsia sp. strain Atlantic rainforest was identified in the state of Rio Grande do Sul, Southern Brazil. Since A. ovale, its main vector, is found frequently parasitizing dogs, animals that can cross international borders freely in southern Brazil, this bacteria can bring major concerns in terms of public health. Copyright © 2016 Elsevier B.V. All rights reserved.

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities.

PubMed

Rodrigues, Jorge L M; Pellizari, Vivian H; Mueller, Rebecca; Baek, Kyunghwa; Jesus, Ederson da C; Paula, Fabiana S; Mirza, Babur; Hamaoui, George S; Tsai, Siu Mui; Feigl, Brigitte; Tiedje, James M; Bohannan, Brendan J M; Nüsslein, Klaus

2013-01-15

The Amazon rainforest is the Earth's largest reservoir of plant and animal diversity, and it has been subjected to especially high rates of land use change, primarily to cattle pasture. This conversion has had a strongly negative effect on biological diversity, reducing the number of plant and animal species and homogenizing communities. We report here that microbial biodiversity also responds strongly to conversion of the Amazon rainforest, but in a manner different from plants and animals. Local taxonomic and phylogenetic diversity of soil bacteria increases after conversion, but communities become more similar across space. This homogenization is driven by the loss of forest soil bacteria with restricted ranges (endemics) and results in a net loss of diversity. This study shows homogenization of microbial communities in response to human activities. Given that soil microbes represent the majority of biodiversity in terrestrial ecosystems and are intimately involved in ecosystem functions, we argue that microbial biodiversity loss should be taken into account when assessing the impact of land use change in tropical forests.

Climate change in Australian tropical rainforests: an impending environmental catastrophe.

PubMed

Williams, Stephen E; Bolitho, Elizabeth E; Fox, Samantha

2003-09-22

It is now widely accepted that global climate change is affecting many ecosystems around the globe and that its impact is increasing rapidly. Many studies predict that impacts will consist largely of shifts in latitudinal and altitudinal distributions. However, we demonstrate that the impacts of global climate change in the tropical rainforests of northeastern Australia have the potential to result in many extinctions. We develop bioclimatic models of spatial distribution for the regionally endemic rainforest vertebrates and use these models to predict the effects of climate warming on species distributions. Increasing temperature is predicted to result in significant reduction or complete loss of the core environment of all regionally endemic vertebrates. Extinction rates caused by the complete loss of core environments are likely to be severe, nonlinear, with losses increasing rapidly beyond an increase of 2 degrees C, and compounded by other climate-related impacts. Mountain ecosystems around the world, such as the Australian Wet Tropics bioregion, are very diverse, often with high levels of restricted endemism, and are therefore important areas of biodiversity. The results presented here suggest that these systems are severely threatened by climate change.

IN11B-1621: Quantifying How Climate Affects Vegetation in the Amazon Rainforest

NASA Technical Reports Server (NTRS)

Das, Kamalika; Kodali, Anuradha; Szubert, Marcin; Ganguly, Sangram; Bongard, Joshua

2016-01-01

Amazon droughts in 2005 and 2010 have raised serious concern about the future of the rainforest. Amazon forests are crucial because of their role as the largest carbon sink in the world which would effect the global warming phenomena with decreased photosynthesis activity. Especially, after a decline in plant growth in 1.68 million km2 forest area during the once-in-a-century severe drought in 2010, it is of primary importance to understand the relationship between different climatic variables and vegetation. In an earlier study, we have shown that non-linear models are better at capturing the relation dynamics of vegetation and climate variables such as temperature and precipitation, compared to linear models. In this research, we learn precise models between vegetation and climatic variables (temperature, precipitation) for normal conditions in the Amazon region using genetic programming based symbolic regression. This is done by removing high elevation and drought affected areas and also considering the slope of the region as one of the important factors while building the model. The model learned reveals new and interesting ways historical and current climate variables affect the vegetation at any location. MAIAC data has been used as a vegetation surrogate in our study. For temperature and precipitation, we have used TRMM and MODIS Land Surface Temperature data sets while learning the non-linear regression model. However, to generalize the model to make it independent of the data source, we perform transfer learning where we regress a regularized least squares to learn the parameters of the non-linear model using other data sources such as the precipitation and temperature from the Climatic Research Center (CRU). This new model is very similar in structure and performance compared to the original learned model and verifies the same claims about the nature of dependency between these climate variables and the vegetation in the Amazon region. As a result of this study, we are able to learn, for the very first time how exactly different climate factors influence vegetation at any location in the Amazon rainforests, independent of the specific sources from which the data has been obtained.

Quantifying How Climate Affects Vegetation in the Amazon Rainforest

NASA Astrophysics Data System (ADS)

Das, K.; Kodali, A.; Szubert, M.; Ganguly, S.; Bongard, J.

2016-12-01

Amazon droughts in 2005 and 2010 have raised serious concern about the future of the rainforest. Amazon forests are crucial because of their role as the largest carbon sink in the world which would effect the global warming phenomena with decreased photosynthesis activity. Especially, after a decline in plant growth in 1.68 million km2 forest area during the once-in-a-century severe drought in 2010, it is of primary importance to understand the relationship between different climatic variables and vegetation. In an earlier study, we have shown that non-linear models are better at capturing the relation dynamics of vegetation and climate variables such as temperature and precipitation, compared to linear models. In this research, we learn precise models between vegetation and climatic variables (temperature, precipitation) for normal conditions in the Amazon region using genetic programming based symbolic regression. This is done by removing high elevation and drought affected areas and also considering the slope of the region as one of the important factors while building the model. The model learned reveals new and interesting ways historical and current climate variables affect the vegetation at any location. MAIAC data has been used as a vegetation surrogate in our study. For temperature and precipitation, we have used TRMM and MODIS Land Surface Temperature data sets while learning the non-linear regression model. However, to generalize the model to make it independent of the data source, we perform transfer learning where we regress a regularized least squares to learn the parameters of the non-linear model using other data sources such as the precipitation and temperature from the Climatic Research Center (CRU). This new model is very similar in structure and performance compared to the original learned model and verifies the same claims about the nature of dependency between these climate variables and the vegetation in the Amazon region. As a result of this study, we are able to learn, for the very first time how exactly different climate factors influence vegetation at any location in the Amazon rainforests, independent of the specific sources from which the data has been obtained.

Clarification of the katydid genus Uchuca Giglio-tos, 1898 (Orthoptera: Tettigoniidae): A new species in the Brazilian Amazon Rainforest.

PubMed

Tavares, Gustavo Costa; Sovano, Rafael Segtowick Da Silva; Gutjahr, Ana Lúcia Nunes

2016-07-22

This paper accomplishes three tasks: Firstly, description of a new species, Uchuca almeirina sp. nov., from the Brazilian Amazon Rainforest, specifically from Monte Dourado, Almeirim, Pará. Secondly, it is proposed that Uchuca macroptera Montealegre-Z & Morris, 2003 be made a synonym of Uchuca ferreirai (Piza, 1976). Thirdly, a compilation of the generic distribution is presented, which includes new records of Uchuca amacayaca Montealegre-Z & Morris (2003) in Brazil and Uchuca similis Montealegre-Z & Morris (2003) in Colombia and Brazil, and the amplification of the occurrences of U. ferreirai.

Genetic population structure in the yellow mongoose, Cynictis penicillata.

PubMed

Van Vuuren, B J; Robinson, T J

1997-12-01

Phylogeographic structure was determined for the yellow mongoose, Cynictis penicillata, using mtDNA RFLPs and control region sequences. The RFLP analysis revealed 13 haplotypes which showed weak geographical patterning consistent with a recent range expansion from a refugial population(s). An analysis of molecular variance (AMOVA) revealed no correspondence between mtDNA phylogeography and subspecies delimitation, nor between matrilines and areas characterized by a high incidence of the viverrid-type rabies, of which the yellow mongoose is the principal vector. The lack of structure was also shown by control region sequences although four of the maternal lineages shared a near-perfect 81 bp repeat. We speculate that regional hot spots of the viverrid rabies biotype reflect population density differences in the yellow mongoose that are not underscored by genetic partitioning, at least at the level of resolution provided by our analyses.

BVOC fluxes from oil palm canopies in South East Asia

NASA Astrophysics Data System (ADS)

Misztal, P. K.; Cape, J. N.; Langford, B.; Nemitz, E.; Helfter, C.; Owen, S.; Heal, M. R.; Hewitt, C. N.; Fowler, D.

2009-04-01

Fluxes by virtual disjunct eddy covariance were measured for the first time in South-East Asia in 2008 from an oil palm plantation. Malaysia and Indonesia account for more than 80% of world oil palm production. Our in situ findings suggest much higher isoprene emissions from oil palms than from rainforest, which is consistent with earlier lab-based predictions of emissions from oil palms (Wilkinson et al., 2006). 50% of global biogenic VOC emissions are estimated to derive from tropical rainforests (Guenther et al., 1995) although in fact a large portion of the emission may derive from oil palms in the tropics. Isoprene and monoterpenes are regarded as the most important biogenic VOCs for the atmospheric chemistry. Overall, maximum isoprene emissions from oil palms were recorded at 11:00 local time, with a mean value of 13 mg m-2 h-1. At the rainforest, the maximum fluxes of isoprene were observed later in the day, at about 13:00 with an average of 2.5 mg m-2 h-1. Initial flux results for total monoterpenes indicate that their mass emission ratio with respect to isoprene was about 1:9 at the rainforest and 1:18 at the oil palm plantation. The results are presented with reference to temperature, photosynthetic radiation and meteorological drivers as well as in comparison with CO2 and H2O fluxes. Empirical parameters in the Guenther algorithm for MEGAN (Guenther et al, 2006), which was originally designed for the Amazon region, have been optimised for this oil palm study. The emission factor obtained from eddy covariance measurements was 18.8 mg m-2 h-1, while the one obtained from leaf level studies at the site was 19.5 mg m-2 h-1. Isoprene fluxes from both Amazonia (Karl et al., 2007) and from rainforest in Borneo 2008 seem to be much lower than from oil palms. This can have consequences for atmospheric chemistry of land use change from rainforest to oil palm plantation, including formation of ozone, SOA and particles and indirect effects on the removal rate of greenhouse gases and pollutants by decreasing OH budgets. Global models predicting atmospheric changes and bottom-up estimates from the tropics must be constrained by direct measurements such as presented here, taking separate account of these major contributions from oil palm plantations and tropical rainforests. References: Guenther, A., C.N. Hewitt, D. Erickson, R. Fall, C. Geron, T.E. Graedel, P. Harley, L. Klinger, M. Lerdau, W.A. McKay, T. Pierce, B. Scholes, R. Steinbrecher, R. Tallamraju, J. Taylor and P. Zimmerman, 1995: A global model of natural volatile organic compound emissions. Journal of Geophysical Research 100, 8873-8892. Guenther, A., T. Karl, P. Harley, C. Wiedinmyer, P. I. Palmer, and C. Geron, 2006: Estimates of global terrestrial isoprene emissions using MEGAN (Model of Emissions of Gases and Aerosols from Nature). Atmos. Chem. Phys. Discuss., 6, 107-173. Karl, T., A. Guenther, R. J. Yokelson, J. Greenberg, M. Potosnak, D. R. Blake, and P. Artaxo, 2007: The tropical forest and fire emissions experiment: Emission, chemistry, and transport of biogenic volatile organic compounds in the lower atmosphere over Amazonia. Journal of Geophysical Research 112, D18302. Wilkinson, M. J., S. M. Owen, M. Possell, J. Hartwell, P. Gould, A. Hall, C. Vickers, and C. N. Hewitt, 2006: Circadian control of isoprene emissions from oil palm (Elaeis guineensis). Plant Journal 47, 960-968.

Measurements of OH and HO2 Radicals and OH Reactivity at Tropical Locations Using Laser-Induced Fluorescence Spectroscopy

NASA Astrophysics Data System (ADS)

Furneaux, K. L.; Whalley, L. K.; Edwards, P.; Goddard, A.; Ingham, T.; Evans, M. J.; Heard, D. E.

2009-04-01

The OH radical is the dominant daytime oxidant in the atmosphere. Together with the closely coupled HO2 radical, these two species (termed HOx) play an important role in determining the composition of the atmosphere. Tropical latitudes are active regions of atmospheric chemistry due to high solar radiation, humidity and temperature. For these reasons, field measurements of HOx in the tropics are crucial to improve understanding of atmospheric chemistry through model - measurement comparisons. Due to the low number of HOx measurements in the tropics, these comparisons are sparse. An aircraft campaign over the pristine Amazon rainforest found HOx concentrations to be high1,2. It has been proposed that this is due to a previously overlooked OH recycling mechanism via the oxidation of isoprene1,2. The need to determine if this is ubiquitous across tropical rainforest regions is necessary. The Leeds FAGE instrument was deployed at the Bukit Atur Global Atmospheric Watch Station, Borneo (5.0N, 117.8E) from April - July 2008 as part of the OP3 project (Oxidant and Particle Photochemical Processes above a South-East Asian tropical rainforest) to measure OH and HO2 concentrations and the OH chemical lifetime by Fluorescence Assay by Gas Expansion (FAGE). These measurements represent the first ground based [HOx] measurements in a tropical rainforest. Chemical activity differed significantly throughout the measurement period. HOx concentrations were elevated in July (average peak [OH] = 5.3 ×106 molecule cm-3) compared to April (average peak [OH] = 2.5 ×106 molecule cm-3), attributed to higher OH sinks in April. Measurements of the OH chemical lifetime can be used to quantify unknown OH sinks. The OH chemical lifetime displayed a diurnal cycle that correlated with isoprene concentrations. At this site isoprene represents the major OH loss route but there are significant unknown fractions. Model calculations result in an under prediction of HOx when measured sinks are included, indicating a missing HOx source. Both OH and HO2 were observed at night. Measurements of HOx at the Cape Verde Atmospheric Observatory (16.9N, 24.9W) were made from May - June 2007 as part of the RHaMBLe (Reactive Halogens in the Marine Boundary Layer) programme. The site is located adjacent to the ocean with an absence of macro algae, providing conditions analogous to open ocean, clean marine air. However, background tropical conditions were not dictated by simple chemistry. Peak OH and HO2 concentrations were 9 × 106 molecule cm-3 and 6 ×108 molecule cm-3, respectively. HO2 was observed at night between 5 - 20 × 106 molecule cm-3. Modelling studies determined oxygenated-VOCs and halogen chemistry to play an important role in HOx chemistry. A comparison of HOx measurements at tropical open ocean and tropical rainforest locations shows that HOx chemistry varies greatly throughout the tropics. Higher HOx sinks in tropical rainforest environments result in a decrease of HOx compared to the tropical open ocean. 1. Lelieveld, J., T. M. Butler, et al. (2008). Atmospheric oxidation capacity sustained by a tropical forest, Nature, 452(7188): 737-740. 2. Martinez, M., Harder, H., et al. (2008). Hydroxyl radicals in the tropical troposphere over the Suriname rainforest: airborne measurements, ACPD, 8, 15491-15536.

A vicious circle of fire, deforestation and climate change: an integrative study for the Amazon region

NASA Astrophysics Data System (ADS)

Thonicke, K.; Rammig, A.; Gumpenberger, M.; Vohland, K.; Poulter, B.; Cramer, W.

2009-04-01

The Amazon rainforest is threatened by deforestation due to wood extraction and agricultural production leading to increasing forest fragmentation and forest degradation. These changes in land surface characteristics and water fluxes are expected to further reduce convective precipitation. Under future climate change the stability of the Amazon rainforest is likely to decrease thus leading to forest dieback (savannization) or forest degradation (secondarization). This puts the Amazon rainforest at risk to reduce the generation of precipitation, to act as a carbon sink and biodiversity hotspot. Fires increased in the past during drought years and in open vegetation thereby further accelerating forest degradation. Deforestation as a result of socioeconomic development in the Amazon basin is projected to further increase in the 21st century and brings climate-induced changes forward. Combined effects of deforestation vs. climate change on the stability of the Amazon rainforest and the role of fire in this system need to be quantified in an integrated study. We present simulation results from future climate (AR4) and deforestation (SimAmazon) experiments using the LPJmL-SPITFIRE vegetation model. Land use change is the main driving factor of forest degradation before 2050, whereas extreme climate change scenarios lead to forest degradation by the end of 2100. Forest fires increase with increasing drought conditions during the 21st century. The resulting effects on vegetation secondarization and savannization and their feedbacks on fire spread and emissions will be presented. The effect of wildfires and intentional burning on forest degradation under future climate and socioeconomic change will be discussed, and recommendations for an integrated land use and fire management are given.

Experimental infection in Cavia porcellus by infected Amblyomma ovale nymphs with Rickettsia sp. (Atlantic rainforest strain).

PubMed

Brustolin, Joice Magali; da Silva Krawczak, Felipe; Alves, Marta Elena Machado; Weiller, Maria Amélia; de Souza, Camila Lopes; Rosa, Fábio Brum; Cadore, Gustavo Cauduro; Dos Anjos Lopes, Sônia Terezinha; Labruna, Marcelo Bahia; Vogel, Fernanda Silveira Flores; de Avila Botton, Sônia; Sangioni, Luís Antônio

2018-03-01

This study describes experimental infection of guinea pigs (Cavia porcellus) infested with naturally infected Amblyomma ovale nymphs with Rickettsia sp. (Atlantic rainforest strain), and the capacity of A. ovale nymphs to transmit this bacterium. Twenty-six guinea pigs were divided into the following groups: G1, 10 animals infested with uninfected A. ovale nymphs; G2, 10 animals infested with nymphs infected with Rickettsia sp. (Atlantic rainforest strain); and G3, 6 animals without tick infestation. Blood samples were taken 7, 14, 21, and 28 days post-infestation for serological and hematological tests. For histopathological analysis and rickettsial DNA detection, fragments of the spleen, lung, brain, and liver were harvested after euthanasia. The average feeding period for nymphs was 6.6 days for G1 and 6 days for G2. Hemolymph and PCR assays, performed to detect the causative agent in ticks, indicated that in G1, all ticks were negative, and in G2, all nymphs were positive by PCR and 80% (8/10) was positive by hemolymph tests. The only clinical change was skin scarring at the tick attachment site. Hematological parameters indicated leukopenia and total plasma protein (TPP) increased with decreased platelets in G1. In G2, leukocytosis, neutrophilia, monocytosis, an increase in platelets, and reduced TPP were observed. Only G2 guinea pigs were seroconverted (80%; 8/10). Histopathology tests indicated mild, diffuse hemosiderosis and mild, multifocal, follicular hyperplasia in the spleen. Molecular analysis did not detect Rickettsia sp. DNA in C. porcellus tissues. We demonstrated the capacity of A. ovale nymphs to transmit Rickettsia sp. (Atlantic rainforest strain) to guinea pigs.

How do beetle assemblages respond to cyclonic disturbance of a fragmented tropical rainforest landscape?

PubMed

Grimbacher, Peter S; Stork, Nigel E

2009-09-01

There are surprisingly few studies documenting effects of tropical cyclones (including hurricanes and typhoons) on rainforest animals, and especially insects, considering that many tropical forests are frequently affected by cyclonic disturbance. Consequently, we sampled a beetle assemblage inhabiting 18 upland rainforest sites in a fragmented landscape in north-eastern Queensland, Australia, using a standardised sampling protocol in 2002 and again 12 months after the passage of Severe Tropical Cyclone Larry (March 2006). The spatial configuration of sites allowed us to test if the effects of a cyclone and those from fragmentation interact. From all insect samples we extracted 12,568 beetles of 382 species from ten families. Beetle species composition was significantly different pre-and post-cyclone although the magnitude of faunal change was not large with 205 species, representing 96% of all individuals, present in both sampling events. Sites with the greatest changes to structure had the greatest changes in species composition. At the site level, increases in woody debris and wood-feeding beetle (Scolytinae) counts were significantly correlated but changes in the percent of ground vegetation were not mirrored by changes in the abundance of foliage-feeding beetles (Chrysomelidae). The overall direction of beetle assemblage change was consistent with increasing aridity, presumably caused by the loss of canopy cover. Sites with the greatest canopy loss had the strongest changes in the proportion of species previously identified in the pre-cyclone study as preferring arid or moist rainforest environments. The magnitude of fragmentation effects was virtually unaltered by the passage of Cyclone Larry. We postulate that in the short-term the effects of cyclonic disturbance and forest fragmentation both reduce the extent of moist, interior habitat.

Arthropod Distribution in a Tropical Rainforest: Tackling a Four Dimensional Puzzle.

PubMed

Basset, Yves; Cizek, Lukas; Cuénoud, Philippe; Didham, Raphael K; Novotny, Vojtech; Ødegaard, Frode; Roslin, Tomas; Tishechkin, Alexey K; Schmidl, Jürgen; Winchester, Neville N; Roubik, David W; Aberlenc, Henri-Pierre; Bail, Johannes; Barrios, Héctor; Bridle, Jonathan R; Castaño-Meneses, Gabriela; Corbara, Bruno; Curletti, Gianfranco; Duarte da Rocha, Wesley; De Bakker, Domir; Delabie, Jacques H C; Dejean, Alain; Fagan, Laura L; Floren, Andreas; Kitching, Roger L; Medianero, Enrique; Gama de Oliveira, Evandro; Orivel, Jérôme; Pollet, Marc; Rapp, Mathieu; Ribeiro, Sérvio P; Roisin, Yves; Schmidt, Jesper B; Sørensen, Line; Lewinsohn, Thomas M; Leponce, Maurice

2015-01-01

Quantifying the spatio-temporal distribution of arthropods in tropical rainforests represents a first step towards scrutinizing the global distribution of biodiversity on Earth. To date most studies have focused on narrow taxonomic groups or lack a design that allows partitioning of the components of diversity. Here, we consider an exceptionally large dataset (113,952 individuals representing 5,858 species), obtained from the San Lorenzo forest in Panama, where the phylogenetic breadth of arthropod taxa was surveyed using 14 protocols targeting the soil, litter, understory, lower and upper canopy habitats, replicated across seasons in 2003 and 2004. This dataset is used to explore the relative influence of horizontal, vertical and seasonal drivers of arthropod distribution in this forest. We considered arthropod abundance, observed and estimated species richness, additive decomposition of species richness, multiplicative partitioning of species diversity, variation in species composition, species turnover and guild structure as components of diversity. At the scale of our study (2 km of distance, 40 m in height and 400 days), the effects related to the vertical and seasonal dimensions were most important. Most adult arthropods were collected from the soil/litter or the upper canopy and species richness was highest in the canopy. We compared the distribution of arthropods and trees within our study system. Effects related to the seasonal dimension were stronger for arthropods than for trees. We conclude that: (1) models of beta diversity developed for tropical trees are unlikely to be applicable to tropical arthropods; (2) it is imperative that estimates of global biodiversity derived from mass collecting of arthropods in tropical rainforests embrace the strong vertical and seasonal partitioning observed here; and (3) given the high species turnover observed between seasons, global climate change may have severe consequences for rainforest arthropods.

Arthropod Distribution in a Tropical Rainforest: Tackling a Four Dimensional Puzzle

PubMed Central

Basset, Yves; Cizek, Lukas; Cuénoud, Philippe; Didham, Raphael K.; Novotny, Vojtech; Ødegaard, Frode; Roslin, Tomas; Tishechkin, Alexey K.; Schmidl, Jürgen; Winchester, Neville N.; Roubik, David W.; Aberlenc, Henri-Pierre; Bail, Johannes; Barrios, Héctor; Bridle, Jonathan R.; Castaño-Meneses, Gabriela; Corbara, Bruno; Curletti, Gianfranco; Duarte da Rocha, Wesley; De Bakker, Domir; Delabie, Jacques H. C.; Dejean, Alain; Fagan, Laura L.; Floren, Andreas; Kitching, Roger L.; Medianero, Enrique; Gama de Oliveira, Evandro; Orivel, Jérôme; Pollet, Marc; Rapp, Mathieu; Ribeiro, Sérvio P.; Roisin, Yves; Schmidt, Jesper B.; Sørensen, Line; Lewinsohn, Thomas M.; Leponce, Maurice

2015-01-01

Quantifying the spatio-temporal distribution of arthropods in tropical rainforests represents a first step towards scrutinizing the global distribution of biodiversity on Earth. To date most studies have focused on narrow taxonomic groups or lack a design that allows partitioning of the components of diversity. Here, we consider an exceptionally large dataset (113,952 individuals representing 5,858 species), obtained from the San Lorenzo forest in Panama, where the phylogenetic breadth of arthropod taxa was surveyed using 14 protocols targeting the soil, litter, understory, lower and upper canopy habitats, replicated across seasons in 2003 and 2004. This dataset is used to explore the relative influence of horizontal, vertical and seasonal drivers of arthropod distribution in this forest. We considered arthropod abundance, observed and estimated species richness, additive decomposition of species richness, multiplicative partitioning of species diversity, variation in species composition, species turnover and guild structure as components of diversity. At the scale of our study (2km of distance, 40m in height and 400 days), the effects related to the vertical and seasonal dimensions were most important. Most adult arthropods were collected from the soil/litter or the upper canopy and species richness was highest in the canopy. We compared the distribution of arthropods and trees within our study system. Effects related to the seasonal dimension were stronger for arthropods than for trees. We conclude that: (1) models of beta diversity developed for tropical trees are unlikely to be applicable to tropical arthropods; (2) it is imperative that estimates of global biodiversity derived from mass collecting of arthropods in tropical rainforests embrace the strong vertical and seasonal partitioning observed here; and (3) given the high species turnover observed between seasons, global climate change may have severe consequences for rainforest arthropods. PMID:26633187

Response of Tropical Forests to Intense Climate Variability and Rainfall Anomaly over the Last Decade

NASA Astrophysics Data System (ADS)

Saatchi, S.; Asefi, S.

2012-04-01

During the last decade, strong precipitation anomalies resulted from increased sea surface temperature in the tropical Atlantic, have caused extensive drying trends in rainforests of western Amazonia, exerting water stress, tree mortality, biomass loss, and large-scale fire disturbance. In contrast, there have been no reports on large-scale disturbance in rainforests of west and central Africa, though being exposed to similar intensity of climate variability. Using data from Tropical Rainfall Mapping Mission (TRMM) (1999-2010), and time series of rainfall observations from meteorological stations (1971-2000), we show that both Amazonian and African rainforest experienced strong precipitation anomalies from 2005-2010. We monitored the response of forest to the climate variability by analyzing the canopy water content observed by SeaWinds Ku-band Scatterometer (QSCAT) (1999-2009) and found that more than 70 million ha of forests in western Amazonia experienced a strong water deficit during the dry season of 2005 and a closely corresponding decline in canopy backscatter that persisted until the next major drought in 2010. This decline in backscatter has been attributed to loss of canopy water content and large-scale tree mortality corroborated by ground and airborne observations. However, no strong impacts was observed on tropical forests of Africa, suggesting that the African rainforest may have more resilience to droughts. We tested this hypothesis by examining the seasonal rainfall patterns, maximum water deficit, and the surface temperature variations. Results show that there is a complex pattern of low annual rainfall, moderate seasonality, and lower surface temperature in Central Africa compared to Amazonia, indicating potentially a lower evapotranspiration circumventing strong water deficits

Response of Tropical Forests to Intense Climate Variability and Rainfall Anomaly of Last Decade

NASA Astrophysics Data System (ADS)

Saatchi, S. S.; Asefi Najafabady, S.

2011-12-01

During the last decade, strong precipitation anomalies resulted from increased sea surface temperature in the tropical Atlantic, have caused extensive drying trends in rainforests of western Amazonia, exerting water stress, tree mortality, biomass loss, and large-scale fire disturbance. In contrast, there have been no reports on large-scale disturbance in rainforests of west and central Africa, though being exposed to similar intensity of climate variability. Using data from Tropical Rainfall Mapping Mission (TRMM) (1999-2010), and time series of rainfall observations from meteorological stations (1971-2000), we show that both Amazonian and African rainforest experienced strong precipitation anomalies from 2005-2010. We monitored the response of forest to the climate variability by analyzing the canopy water content observed by SeaWinds Ku-band Scatterometer (QSCAT) (1999-2009) and found that more than 70 million ha of forests in western Amazonia experienced a strong water deficit during the dry season of 2005 and a closely corresponding decline in canopy backscatter that persisted until the next major drought in 2010. This decline in backscatter has been attributed to loss of canopy water content and large-scale tree mortality corroborated by ground and airborne observations. However, no strong impacts was observed on tropical forests of Africa, suggesting that the African rainforest may have more resilience to droughts. We tested this hypothesis by examining the seasonal rainfall patterns, maximum water deficit, and the surface temperature variations. Results show that there is a complex pattern of low annual rainfall, moderate seasonality, and lower surface temperature in Central Africa compared to Amazonia, indicating potentially a lower evapotranspiration circumventing strong water deficits.

After more than a decade of soil moisture deficit, tropical rainforest trees maintain photosynthetic capacity, despite increased leaf respiration.

PubMed

Rowland, Lucy; Lobo-do-Vale, Raquel L; Christoffersen, Bradley O; Melém, Eliane A; Kruijt, Bart; Vasconcelos, Steel S; Domingues, Tomas; Binks, Oliver J; Oliveira, Alex A R; Metcalfe, Daniel; da Costa, Antonio C L; Mencuccini, Maurizio; Meir, Patrick

2015-12-01

Determining climate change feedbacks from tropical rainforests requires an understanding of how carbon gain through photosynthesis and loss through respiration will be altered. One of the key changes that tropical rainforests may experience under future climate change scenarios is reduced soil moisture availability. In this study we examine if and how both leaf photosynthesis and leaf dark respiration acclimate following more than 12 years of experimental soil moisture deficit, via a through-fall exclusion experiment (TFE) in an eastern Amazonian rainforest. We find that experimentally drought-stressed trees and taxa maintain the same maximum leaf photosynthetic capacity as trees in corresponding control forest, independent of their susceptibility to drought-induced mortality. We hypothesize that photosynthetic capacity is maintained across all treatments and taxa to take advantage of short-lived periods of high moisture availability, when stomatal conductance (gs ) and photosynthesis can increase rapidly, potentially compensating for reduced assimilate supply at other times. Average leaf dark respiration (Rd ) was elevated in the TFE-treated forest trees relative to the control by 28.2 ± 2.8% (mean ± one standard error). This mean Rd value was dominated by a 48.5 ± 3.6% increase in the Rd of drought-sensitive taxa, and likely reflects the need for additional metabolic support required for stress-related repair, and hydraulic or osmotic maintenance processes. Following soil moisture deficit that is maintained for several years, our data suggest that changes in respiration drive greater shifts in the canopy carbon balance, than changes in photosynthetic capacity. © 2015 John Wiley & Sons Ltd.

Hydrologically transported dissolved organic carbon influences soil respiration in a tropical rainforest

NASA Astrophysics Data System (ADS)

Zhou, Wen-Jun; Lu, Hua-Zheng; Zhang, Yi-Ping; Sha, Li-Qing; Schaefer, Douglas Allen; Song, Qing-Hai; Deng, Yun; Deng, Xiao-Bao

2016-10-01

To better understand the effect of dissolved organic carbon (DOC) transported by hydrological processes (rainfall, throughfall, litter leachate, and surface soil water; 0-20 cm) on soil respiration in tropical rainforests, we detected the DOC flux in rainfall, throughfall, litter leachate, and surface soil water (0-20 cm), compared the seasonality of δ13CDOC in each hydrological process, and δ13C in leaves, litter, and surface soil, and analysed the throughfall, litter leachate, and surface soil water (0-20 cm) effect on soil respiration in a tropical rainforest in Xishuangbanna, south-west China. Results showed that the surface soil intercepted 94.4 ± 1.2 % of the annual litter leachate DOC flux and is a sink for DOC. The throughfall and litter leachate DOC fluxes amounted to 6.81 and 7.23 % of the net ecosystem exchange respectively, indicating that the DOC flux through hydrological processes is an important component of the carbon budget, and may be an important link between hydrological processes and soil respiration in a tropical rainforest. Even the variability in soil respiration is more dependent on the hydrologically transported water than DOC flux insignificantly, soil temperature, and soil-water content (at 0-20 cm). The difference in δ13C between the soil, soil water (at 0-20 cm), throughfall, and litter leachate indicated that DOC is transformed in the surface soil and decreased the sensitivity indices of soil respiration of DOC flux to water flux, which suggests that soil respiration is more sensitive to the DOC flux in hydrological processes, especially the soil-water DOC flux, than to soil temperature or soil moisture.

Carbon stock and turnover in riparian soils under lowland rainforest transformation systems on Sumatra, Indonesia

NASA Astrophysics Data System (ADS)

Hennings, Nina; Kuzyakov, Yakov

2017-04-01

In many tropical areas, rainforests are being cleared in order to exploit timber and other forest products as well as plant crops for food, feed and fuel use. The determinants of different patterns of deforestation and the roles of resulting transformation systems of tropical riparian rainforests for ecological functions have yet received little attention in scientific research. Especially C stocks in riparian zones are strongly affected by climate and land use changes that lead to changes in water regime and ground water level drops. We investigated the effects of land transformations in riparian ecosystems of Sumatra, on soil C content, stocks and decomposability at the landscape scale. We compare C losses in transformation systems and rainforests and estimate the contribution of soil erosion and organic matter mineralization. Further, these losses are related to changing water level and temperature increase along increasing distance to the stream. This approach is based on changing δ13C values of SOC in the topsoil as compared to those in subsoil. The shift of δ13C of SOC in the topsoil from the linear regression calculated by δ13C value with log(SOC) in the topsoil represents the modification of the C turnover rate in the top soil. Erosion is estimated by the shift of the δ13C value of SOC in the subsoil under plantations. Further, the δ13C and δ15N soil profiles and their comparison with litter of local vegetation, can be used to estimate the contribution of autochthonous and allochthonous organics to soil C stocks. Preliminary results show strong increase of erosive losses, increased decomposition with land-use transformation and decrease of C stocks with decreasing water table.

Black howler monkey (Alouatta pigra) activity, foraging and seed dispersal patterns in shaded cocoa plantations versus rainforest in southern Mexico.

PubMed

Zárate, Diego A; Andresen, Ellen; Estrada, Alejandro; Serio-Silva, Juan Carlos

2014-09-01

Recent evidence has shown that primates worldwide use agroecosystems as temporary or permanent habitats. Detailed information on how these primates are using these systems is scant, and yet their role as seed dispersers is often implied. The main objective of this study was to compare the activity, foraging patterns and seed dispersal role of black howler monkeys (Alouatta pigra) inhabiting shaded cocoa plantations and rainforest in southern Chiapas, Mexico. We gathered data on three monkey groups living in shaded cocoa plantations and three groups living in rainforest, using focal sampling, and collecting fecal samples. General activity and foraging patterns were similar in both habitats, with the exception that monkeys in the cocoa habitat spent more time feeding on petioles. Monkeys in shaded cocoa plantations dispersed 51,369 seeds (4% were seeds ≥3 mm width) of 16 plant species. Monkeys in the rainforest dispersed 6,536 seeds (78% were seeds ≥3 mm width) of 13 plant species. Our data suggest that the difference between habitats in the proportion of large versus small seeds dispersed reflects differences in fruit species abundance and availability in cocoa versus forest. Mean seed dispersal distances were statistically similar in both habitats (cocoa = 149 m, forest = 86 m). We conclude that the studied cocoa plantations provide all elements necessary to constitute a long-term permanent habitat for black howler monkeys. In turn, howler monkeys living in these plantations are able to maintain their functional role as seed dispersers for those native tree and liana species present within their areas of activities. © 2014 Wiley Periodicals, Inc.

Sensitivity to high temperature and water stress in recalcitrant Baccaurea ramiflora seeds.

PubMed

Wen, Bin; Liu, Minghang; Tan, Yunhong; Liu, Qiang

2016-07-01

Southeast Asia experiences one of the highest rates of deforestation in the tropics due to agricultural expansion, logging, habitat fragmentation and urbanization. As tropical rainforests harbour abundant recalcitrant-seeded species, it is important to understand how recalcitrant seeds respond to deforestation and fragmentation. Baccaurea ramiflora is a recalcitrant-seeded species, widely distributed in Southeast Asian tropical rainforest. In this study, B. ramiflora seeds were sown in three plots, one in a nature reserve and two in disturbed holy hill forests, to investigate seed germination and seedling establishment in the field, while laboratory experiments were conducted to investigate the effects of high temperature and water stress on germination. It was found that seed germination and seedling establishment in B. ramiflora were clearly reduced in holy hills compared to the nature reserve, although the seeds were only moderately to minimally recalcitrant. This was potentially caused by increased temperature and decreased moisture in holy hills, for laboratory experiments showed that seed germination was greatly inhibited by temperatures ≥35 °C or water potentials ≤-0.5 MPa, and depressed by heat treatment at 40 °C when the continuous heating period lasted for 240 h or daily periodic heating exceeded 10 h. Unlike orthodox seeds, which can endure much higher temperatures in the air-dried state than in the imbibed state, both blotted and immersed B. ramiflora seeds lost viability within a narrow temperature range between 50 and 60 °C. As recalcitrant seeds can be neither air-dried nor heated, species producing recalcitrant seeds will suffer more than those producing orthodox seeds in germination and seedling establishment from increased temperature and decreased moisture in fragmented rainforests, which results in sensitivity of recalcitrant-seeded species to rainforest fragmentation.

Biodiversity of mycobiota throughout the Brazil nut supply chain: From rainforest to consumer.

PubMed

Taniwaki, Marta H; Frisvad, Jens C; Ferranti, Larissa S; de Souza Lopes, Aline; Larsen, Thomas O; Fungaro, Maria Helena P; Iamanaka, Beatriz T

2017-02-01

A total of 172 Brazil nut samples (114 in shell and 58 shelled) from the Amazon rainforest region and São Paulo state, Brazil was collected at different stages of the Brazil nut production chain: rainforest, street markets, processing plants and supermarkets. The mycobiota of the Brazil nut samples were evaluated and also compared in relation to water activity. A huge diversity of Aspergillus and Penicillium species were found, besides Eurotium spp., Zygomycetes and dematiaceous fungi. A polyphasic approach using morphological and physiological characteristics, as well as molecular and extrolite profiles, were studied to distinguish species among the more important toxigenic ones in Aspergillus section Flavi and A. section Nigri. Several metabolites and toxins were found in these two sections. Ochratoxin A (OTA) was found in 3% of A. niger and 100% of A. carbonarius. Production of aflatoxins B and G were found in all isolates of A. arachidicola, A. bombycis, A. nomius, A. pseudocaelatus and A. pseudonomius, while aflatoxin B was found in 38% of A. flavus and all isolates of A. pseudotamarii. Cyclopiazonic acid (CPA) was found in A. bertholletius (94%), A. tamarii (100%), A. caelatus (54%) and A. flavus (41%). Tenuazonic acid, a toxin commonly found in Alternaria species was produced by A. bertholletius (47%), A. caelatus (77%), A. nomius (55%), A. pseudonomius (75%), A. arachidicola (50%) and A. bombycis (100%). This work shows the changes of Brazil nut mycobiota and the potential of mycotoxin production from rainforest to consumer, considering the different environments which exist until the nuts are consumed. Copyright © 2016 Elsevier Ltd. All rights reserved.

Estimating drought induced tree mortality in the Amazon rainforest: A simulation study with a focus on plant hydraulic processes

NASA Astrophysics Data System (ADS)

Papastefanou, P.; Fleischer, K.; Hickler, T.; Grams, T.; Lapola, D.; Quesada, C. A.; Zang, C.; Rammig, A.

2017-12-01

The Amazon basin was recently hit by severe drought events that were unprecedented in their severity and spatial extent, e.g. during 2005, 2010 and 2015/2016. Significant amounts of biomass were lost, turning large parts of the rainforest from a carbon sink into a carbon source. It is assumed that drought-induced tree mortality from hydraulic failure played an important role during these events and may become more frequent in the Amazon region in the future. Many state-of-the-art dynamic vegetation models do not include plant hydraulic processes and fail to reproduce observed rainforest responses to drought events, such as e.g. increased tree mortality. We address this research gap by developing a simple plant-hydraulic module for the dynamic vegetation model LPJ-GUESS. This plant-hydraulic module uses leaf water potential and cavitation as baseline processes to simulate tree mortality under drought stress. Furthermore, we introduce different plant strategies in the model, which describe e.g. differences in the stomatal regulation under drought stress. To parameterize and evaluate our hydraulic module, we use a set of available observational data from the Amazon region. We apply our model to the Amazon Basin and highlight similarities and differences across other measured and predicted drought responses, e.g. extrapolated observations and data derived from satellite measurements. Our results highlight the importance of including plant hydraulic processes in dynamic vegetation models to correctly predict vegetation dynamics under drought stress and show major differences on the vegetation dynamics depending on the selected plant strategies. We also identify gaps in process understanding of the triggering factors, the extent and the consequences of drought responses that hampers our ability to predict potential impact of future drought events on the Amazon rainforest.

Rapid replacement of riparian rainforest habitat and the impacts on the meandering dynamics of the Kinabatangan River, Borneo

NASA Astrophysics Data System (ADS)

Horton, Alexander J.; Constantine, José A.

2014-05-01

Meandering rivers are defined by their nature to migrate, remobilising floodplain sediment and constructing new surfaces for riparian vegetation to colonise. The presence of riparian vegetation has long been known to limit the ability of rivers to erode riverbanks, but it has remained unclear the principal means by which vegetation provides this function. As a result, most models that predict meandering behaviour do not fully incorporate vegetation, thereby limiting their utility where forest is rapidly replaced. The problem is particularly acute along the Kinabatangan River of Sabah in Malaysian Borneo, where oil palm plantations are replacing one of the oldest riparian rainforests on the planet. The area of Sabah has seen rapid and extensive land use change in the last 40 years, as virgin rainforest has been systematically cleared for logging, and to make way for oil palm plantations. In the 18 years from 1990 to 2008, Sabah lost half of its intact rainforest, which equates to more than 1.85 million hectares. Using Landsat imagery dating back to 1973, we report here the impacts of this rapid land-use change on rates of meander migration on a 280-km reach of the Kinabatangan River. The river planform has been remarkably stable throughout the time period of study, but individual meanders show a rapid response to large discharge events, migrating over an order of magnitude faster than nearby reaches. Rapidly migrating meanders generally occur along portions of floodplain that have been artificially cleared of riparian vegetation, potentially resulting in significant increases in sediment load and within-channel bar development. A field campaign is planned to investigate the mechanisms by which riparian vegetation effect meander migration in these tropical regions.

Said another way: stroke, evolution, and the rainforests: an ancient approach to modern health care.

PubMed

Collins, Christopher

2007-01-01

The relatively new discipline of evolutionary medicine. To raise awareness among healthcare professionals that our modern view of illness and health care might be flawed. Published literature in CINAHL, MEDLINE, Cochrane databases, and EMBASE. Our modern lifestyles and healthcare paradigms (using stroke as example), may be at odds with our palaeolithic genome. The dietary regimes of remaining hunter-gatherer communities merit attention and study in this regard. Time is running out as the rainforests dwindle and hunter-gatherer communities are acculturated. The selective forces that resulted in the evolution of the human species were mainly environmental. Our metabolism, physiology, and genome, therefore, are geared towards survival under certain environmental parameters. With the advent of agriculture, almost 11,000 years ago, those parameters changed. Our ancestors' lifestyles transformed from wandering hunter-gatherers to sedentary consumers of more than they needed to survive. Many studies link today's prevalence of metabolic syndrome (diabetes, obesity, and cardio- and cerebrovascular diseases) in developed countries with this historic change in human behavior. If this is a valid correlation to make, then the few remaining hunter-gatherer communities in today's rainforests must surely hold the key to human health. Certainly, physiological parameters in these people are impressive, but trends are worrying. There is clear derangement of these parameters when exposed to any degree of acculturated lifestyle. In addition, the natural homelands of these communities, the rainforests, are dwindling at an alarming rate in order to maintain our acculturated norms. The race is on, therefore, to learn what we can about diet, exercise, and natural medicine from the last few humans who live lifestyles that might be closest to our natural state.

Constitutive polymorphic cyanogenesis in the Australian rainforest tree, Ryparosa kurrangii (Achariaceae).

PubMed

Webber, Bruce L; Miller, Rebecca E; Woodrow, Ian E

2007-08-01

Cyanogenesis, the liberation of volatile hydrogen cyanide from endogenous cyanide-containing compounds, is a proven plant defence mechanism and the particular cyanogens involved have taxonomic utility. The cyclopentenoncyanhydrin glycoside gynocardin was the only cyanogen isolated from foliar tissue of the rare Australian rainforest tree, Ryparosa kurrangii (Achariaceae). Mechanical damage simulating foliar herbivory did not induce a significant increase in the expression of cyanogenesis over a 24h period, indicating cyanogenic herbivore defence in R. kurrangii is constitutive. The cyanogenic potential of mature leaves was quantitatively polymorphic between trees in a natural population, ranging from 0.54 to 4.77 mg CN g(-1) dry wt leaf tissue.

Four new species of Luciuranus fireflies from the Brazilian Atlantic Rainforest (Coleoptera: Lampyridae).

PubMed

Silveira, Luiz F L da; Souto, Paula M; Mermudes, J R M

2018-04-20

Luciuranus Silveira, Khattar Mermudes, 2016 is a firefly genus whose species bear an intricate, species-specific lock-and-key mechanism of reproductive isolation. Here we propose four new species, Luciuranus magnoculus sp. nov., L. desideratus sp. nov., L. takiyae sp. nov. and L. carioca sp. nov., and provide illustrations of their diagnostic features and an updated key to species. As previously reported for their congenerics, each of the four new species have stereotypical morphology of both male and female terminalia, and are regarded as prima facie endemics of single massifs of the Serra da Mantiqueira and Serra do Mar, in the Brazilian Atlantic Rainforest.

Conserving Tropical Tree Diversity and Forest Structure: The Value of Small Rainforest Patches in Moderately-Managed Landscapes

PubMed Central

Hernández-Ruedas, Manuel A.; Arroyo-Rodríguez, Víctor; Meave, Jorge A.; Martínez-Ramos, Miguel; Ibarra-Manríquez, Guillermo; Martínez, Esteban; Jamangapé, Gilberto; Melo, Felipe P. L.; Santos, Bráulio A.

2014-01-01

Rainforests are undergoing severe deforestation and fragmentation worldwide. A huge amount of small forest patches are being created, but their value in conserving biodiversity and forest structure is still controversial. Here, we demonstrate that in a species-rich and moderately-managed Mexican tropical landscape small rainforest patches (<100 ha) can be highly valuable for the conservation of tree diversity and forest structure. These patches showed diverse communities of native plants, including endangered species, and a new record for the country. Although the number of logged trees increased in smaller patches, patch size was a poor indicator of basal area, stem density, number of species, genera and families, and community evenness. Cumulative species-area curves indicated that all patches had a similar contribution to the regional species diversity. This idea also was supported by the fact that patches strongly differed in floristic composition (high β-diversity), independently of patch size. Thus, in agreement with the land-sharing approach, our findings support that small forest patches in moderately-managed landscapes should be included in conservation initiatives to maintain landscape heterogeneity, species diversity, and ecosystem services. PMID:24901954

Predicting bird song from space

PubMed Central

Smith, Thomas B; Harrigan, Ryan J; Kirschel, Alexander N G; Buermann, Wolfgang; Saatchi, Sassan; Blumstein, Daniel T; de Kort, Selvino R; Slabbekoorn, Hans

2013-01-01

Environmentally imposed selection pressures are well known to shape animal signals. Changes in these signals can result in recognition mismatches between individuals living in different habitats, leading to reproductive divergence and speciation. For example, numerous studies have shown that differences in avian song may be a potent prezygotic isolating mechanism. Typically, however, detailed studies of environmental pressures on variation in animal behavior have been conducted only at small spatial scales. Here, we use remote-sensing data to predict animal behavior, in this case, bird song, across vast spatial scales. We use remotely sensed data to predict the song characteristics of the little greenbul (Andropadus virens), a widely distributed African passerine, found across secondary and mature rainforest habitats and the rainforest-savanna ecotone. Satellite data that captured ecosystem structure and function explained up to 66% of the variation in song characteristics. Song differences observed across habitats, including those between human-altered and mature rainforest, have the potential to lead to reproductive divergence, and highlight the impacts that both natural and anthropogenic change may have on natural populations. Our approach offers a novel means to examine the ecological correlates of animal behavior across large geographic areas with potential applications to both evolutionary and conservation biology. PMID:24062797

Conserving tropical tree diversity and forest structure: the value of small rainforest patches in moderately-managed landscapes.

PubMed

Hernández-Ruedas, Manuel A; Arroyo-Rodríguez, Víctor; Meave, Jorge A; Martínez-Ramos, Miguel; Ibarra-Manríquez, Guillermo; Martínez, Esteban; Jamangapé, Gilberto; Melo, Felipe P L; Santos, Bráulio A

2014-01-01

Rainforests are undergoing severe deforestation and fragmentation worldwide. A huge amount of small forest patches are being created, but their value in conserving biodiversity and forest structure is still controversial. Here, we demonstrate that in a species-rich and moderately-managed Mexican tropical landscape small rainforest patches (<100 ha) can be highly valuable for the conservation of tree diversity and forest structure. These patches showed diverse communities of native plants, including endangered species, and a new record for the country. Although the number of logged trees increased in smaller patches, patch size was a poor indicator of basal area, stem density, number of species, genera and families, and community evenness. Cumulative species-area curves indicated that all patches had a similar contribution to the regional species diversity. This idea also was supported by the fact that patches strongly differed in floristic composition (high β-diversity), independently of patch size. Thus, in agreement with the land-sharing approach, our findings support that small forest patches in moderately-managed landscapes should be included in conservation initiatives to maintain landscape heterogeneity, species diversity, and ecosystem services.

Parallel diversifications of Cremastosperma and Mosannona (Annonaceae), tropical rainforest trees tracking Neogene upheaval of South America

PubMed Central

Maas, Paul J. M.; Melchers-Sharrott, Heleen

2018-01-01

Much of the immense present day biological diversity of Neotropical rainforests originated from the Miocene onwards, a period of geological and ecological upheaval in South America. We assess the impact of the Andean orogeny, drainage of Lake Pebas and closure of the Panama isthmus on two clades of tropical trees (Cremastosperma, ca 31 spp.; and Mosannona, ca 14 spp.; both Annonaceae). Phylogenetic inference revealed similar patterns of geographically restricted clades and molecular dating showed diversifications in the different areas occurred in parallel, with timing consistent with Andean vicariance and Central American geodispersal. Ecological niche modelling approaches show phylogenetically conserved niche differentiation, particularly within Cremastosperma. Niche similarity and recent common ancestry of Amazon and Guianan Mosannona species contrast with dissimilar niches and more distant ancestry of Amazon, Venezuelan and Guianan species of Cremastosperma, suggesting that this element of the similar patterns of disjunct distributions in the two genera is instead a biogeographic parallelism, with differing origins. The results provide further independent evidence for the importance of the Andean orogeny, the drainage of Lake Pebas, and the formation of links between South and Central America in the evolutionary history of Neotropical lowland rainforest trees. PMID:29410860

Parallel diversifications of Cremastosperma and Mosannona (Annonaceae), tropical rainforest trees tracking Neogene upheaval of South America.

PubMed

Pirie, Michael D; Maas, Paul J M; Wilschut, Rutger A; Melchers-Sharrott, Heleen; Chatrou, Lars W

2018-01-01

Much of the immense present day biological diversity of Neotropical rainforests originated from the Miocene onwards, a period of geological and ecological upheaval in South America. We assess the impact of the Andean orogeny, drainage of Lake Pebas and closure of the Panama isthmus on two clades of tropical trees ( Cremastosperma , ca 31 spp.; and Mosannona , ca 14 spp.; both Annonaceae). Phylogenetic inference revealed similar patterns of geographically restricted clades and molecular dating showed diversifications in the different areas occurred in parallel, with timing consistent with Andean vicariance and Central American geodispersal. Ecological niche modelling approaches show phylogenetically conserved niche differentiation, particularly within Cremastosperma . Niche similarity and recent common ancestry of Amazon and Guianan Mosannona species contrast with dissimilar niches and more distant ancestry of Amazon, Venezuelan and Guianan species of Cremastosperma , suggesting that this element of the similar patterns of disjunct distributions in the two genera is instead a biogeographic parallelism, with differing origins. The results provide further independent evidence for the importance of the Andean orogeny, the drainage of Lake Pebas, and the formation of links between South and Central America in the evolutionary history of Neotropical lowland rainforest trees.

Morphological and molecular characterization and phylogenetic relationships of a new species of trypanosome in Tapirus terrestris (lowland tapir), Trypanosoma terrestris sp. nov., from Atlantic Rainforest of southeastern Brazi.

PubMed

Acosta, Igor da Cunha Lima; da Costa, Andrea Pereira; Nunes, Pablo Henrique; Gondim, Maria Fernanda Naegeli; Gatti, Andressa; Rossi, João Luiz; Gennari, Solange Maria; Marcili, Arlei

2013-12-11

The Lowland tapir (Tapirus terrestris) is the largest Brazilian mammal and despite being distributed in various Brazilian biomes, it is seriously endangered in the Atlantic Rainforest. These hosts were never evaluated for the presence of Trypanosoma parasites. The Lowland tapirs were captured in the Brazilian southeastern Atlantic Rainforest, Espírito Santo state. Trypanosomes were isolated by hemoculture, and the molecular phylogeny based on small subunit rDNA (SSU rDNA) and glycosomal-3-phosphate dehydrogenase (gGAPDH) gene sequences and the ultrastructural features seen via light microscopy and scanning and transmission electron microscopy are described. Phylogenetic trees using combined SSU rDNA and gGAPDH data sets clustered the trypanosomes of Lowland tapirs, which were highly divergent from other trypanosome species. The phylogenetic position and morphological discontinuities, mainly in epimastigote culture forms, made it possible to classify the trypanosomes from Lowland tapirs as a separate species. The isolated trypanosomes from Tapirus terrestris are a new species, Trypanosoma terrestris sp. n., and were positioned in a new Trypanosoma clade, named T. terrestris clade.

Morphological and molecular characterization and phylogenetic relationships of a new species of trypanosome in Tapirus terrestris (lowland tapir), Trypanosoma terrestris sp. nov., from Atlantic Rainforest of southeastern Brazi

PubMed Central

2013-01-01

Background The Lowland tapir (Tapirus terrestris) is the largest Brazilian mammal and despite being distributed in various Brazilian biomes, it is seriously endangered in the Atlantic Rainforest. These hosts were never evaluated for the presence of Trypanosoma parasites. Methods The Lowland tapirs were captured in the Brazilian southeastern Atlantic Rainforest, Espírito Santo state. Trypanosomes were isolated by hemoculture, and the molecular phylogeny based on small subunit rDNA (SSU rDNA) and glycosomal-3-phosphate dehydrogenase (gGAPDH) gene sequences and the ultrastructural features seen via light microscopy and scanning and transmission electron microscopy are described. Results Phylogenetic trees using combined SSU rDNA and gGAPDH data sets clustered the trypanosomes of Lowland tapirs, which were highly divergent from other trypanosome species. The phylogenetic position and morphological discontinuities, mainly in epimastigote culture forms, made it possible to classify the trypanosomes from Lowland tapirs as a separate species. Conclusions The isolated trypanosomes from Tapirus terrestris are a new species, Trypanosoma terrestris sp. n., and were positioned in a new Trypanosoma clade, named T. terrestris clade. PMID:24330660

Detection and Distribution of Natural Gaps in Tropical Rainforest

NASA Astrophysics Data System (ADS)

Goulamoussène, Y.; Linguet, L.; Hérault, B.

2014-12-01

Forest management is important to assess biodiversity and ecological processes. Requirements for disturbance information have also been motivated by the scientific community. Therefore, understanding and monitoring the distribution frequencies of treefall gaps is relevant to better understanding and predicting the carbon budget in response to global change and land use change. In this work we characterize and quantify the frequency distribution of natural canopy gaps. We observe then interaction between environment variables and gap formation across tropical rainforest of the French Guiana region by using high resolution airborne Light Detection and Ranging (LiDAR). We mapped gaps with canopy model distribution on 40000 ha of forest. We used a Bayesian modelling framework to estimate and select useful covariate model parameters. Topographic variables are included in a model to predict gap size distribution. We discuss results from the interaction between environment and gap size distribution, mainly topographic indexes. The use of both airborne and space-based techniques has improved our ability to supply needed disturbance information. This work is an approach at plot scale. The use of satellite data will allow us to work at forest scale. The inclusion of climate variables in our model will let us assess the impact of global change on tropical rainforest.

Following Saharan Dust Outbreak Toward The Amazon Basin

NASA Astrophysics Data System (ADS)

Ben Ami, Y.; Koren, I.; Rudich, Y.; Flores, M.

2008-12-01

The role of the Amazon rainforest on earth climatic system is well recognized. To keep forest wellbeing and the fragile balance between the rainforest and the atmosphere, the Amazon must contain a satisfactory amount of nutrients to support the plants. The extensive rain and floods wash most of the soluble nutrients from the rainforest soil, leaving behind acidic kaolinite clay or sandy soil, with limited minerals for plant growth. It was suggested that lack of mineral in the soil may be replenished by deposition of Saharan mineral dust. Using remote sensing data (from the A-train satellites constellation) following with in-situ measurements (as part of the AMazonian Aerosol CharacteriZation Experiment (AMZE) campaign), ground-based data (from AErosol RObotic NETwork (AERONET)) and back trajectory calculations, we analyzed Saharan dust transport toward the Amazon basin during the AMZE period (Feb 7 to Mar 14, 2008). Dust mass, sink, vertical distribution and surface wind speeds were analyzed over the Bodele depression (located in Chad), where most of the dust is emitted, along the Atlantic Ocean and near the Brazilian coastline. Using an integrated data analysis approach we followed dust packages from their emission in the Sahara to their sink in the Amazon forest.

Climate change in Australian tropical rainforests: an impending environmental catastrophe.

PubMed Central

Williams, Stephen E; Bolitho, Elizabeth E; Fox, Samantha

2003-01-01

It is now widely accepted that global climate change is affecting many ecosystems around the globe and that its impact is increasing rapidly. Many studies predict that impacts will consist largely of shifts in latitudinal and altitudinal distributions. However, we demonstrate that the impacts of global climate change in the tropical rainforests of northeastern Australia have the potential to result in many extinctions. We develop bioclimatic models of spatial distribution for the regionally endemic rainforest vertebrates and use these models to predict the effects of climate warming on species distributions. Increasing temperature is predicted to result in significant reduction or complete loss of the core environment of all regionally endemic vertebrates. Extinction rates caused by the complete loss of core environments are likely to be severe, nonlinear, with losses increasing rapidly beyond an increase of 2 degrees C, and compounded by other climate-related impacts. Mountain ecosystems around the world, such as the Australian Wet Tropics bioregion, are very diverse, often with high levels of restricted endemism, and are therefore important areas of biodiversity. The results presented here suggest that these systems are severely threatened by climate change. PMID:14561301

[Dynamics of Amomum villosum growth and its fruit yield cultivated under tropical forests].

PubMed

Zheng, Zheng; Gan, Jianmin; Feng, Zhili; Meng, Ying

2004-01-01

Investigations on the dynamics of Amomum villosum growth and its fruit yield cultivated under tropical ravine rainforest and secondary forest at different elevations in Xishuangbanna showed that the yield of A. villosum was influenced by the site age, sun light level of understorey, and water stress in dry season. The fruit yield and mature plant density decreased with increasing age of the A. villosum site. The fruit yield increased with sun light level when the light level in understorey was under 35% of full sun light (P < 0.05). The fruit yield at the lower site by stream was significantly higher than that at upper site (P < 0.05). The yield difference between ravine rainforest and secondary forest was not significant. Planned cultivation of A. villosum in the secondary forest of the shifting cultivation land by ravine from 800-1000 m elevation instead of customary cultivation in the ravine rainforest, could not only resolve the problem of the effect of light deficiency in understorey and water stress in the dry season on A. villosum fruit yield, but also be useful to protect the tropical ravine rain forest.

Helminth parasites of Galictis cuja (Carnivora, Mustelidae), from localities in the Atlantic forest of Brazil.

PubMed

Corrêa, Pilar; Bueno, Cecília; Vieira, Fabiano Matos; Muniz-Pereira, Luís Cláudio

2016-01-01

The current study aimed to investigate the helminth parasites of a population of Galictis cuja (Carnivora, Mustelidae) that occur in Atlantic Forest in the Southeastern region of Brazil. We necropsied 18 specimens of G. cuja, collected between January 2009 and May 2014, ran over victims on BR-040 highway, between the municipalities of Duque de Caxias, state of Rio de Janeiro and Juiz de Fora, state of Minas Gerais, localities inserted in Atlantic rainforest Biome. A total of six species of helminths were identified: Dioctophyme renale, Molineus elegans, Physaloptera sp., Strongyloides sp., Platynosomum illiciens, and Pachysentis gethi. Molineus elegans, Physaloptera sp. and P. illiciens were recorded for the first time in this host. Data provided in the current study when compared to the previous reports of parasitism by helminths in G. cuja in Brazil demonstrate that this study is the most representative with this host species.

Earth observations taken from Space Shuttle Columbia during STS-93 mission

NASA Image and Video Library

1999-07-25

STS093-708-062 (23-27 July 1999) --- The STS-93 astronauts took this picture of the Island of Borneo, which is divided among Indonesia, Malaysia and Brunei. The Rajang River meets the South China Sea in the northwestern portion of the Malaysian state of Sarawak. Smoke from both large and small fires is blowing north by the prevailing summer winds. Notice the contrast of dark colored rainforest with the lighter clearings where the largest fires are burning. According to NASA scientists studying the STS-93 photo collection, the sediment plumes along the coast are mostly shoreline erosional materials caught up in longshore currents. The Saribas River can be seen at the bottom.

Nitrogen-fixing trees inhibit growth of regenerating Costa Rican rainforests.

PubMed

Taylor, Benton N; Chazdon, Robin L; Bachelot, Benedicte; Menge, Duncan N L

2017-08-15

More than half of the world's tropical forests are currently recovering from human land use, and this regenerating biomass now represents the largest carbon (C)-capturing potential on Earth. How quickly these forests regenerate is now a central concern for both conservation and global climate-modeling efforts. Symbiotic nitrogen-fixing trees are thought to provide much of the nitrogen (N) required to fuel tropical secondary regrowth and therefore to drive the rate of forest regeneration, yet we have a poor understanding of how these N fixers influence the trees around them. Do they promote forest growth, as expected if the new N they fix facilitates neighboring trees? Or do they suppress growth, as expected if competitive inhibition of their neighbors is strong? Using 17 consecutive years of data from tropical rainforest plots in Costa Rica that range from 10 y since abandonment to old-growth forest, we assessed how N fixers influenced the growth of forest stands and the demographic rates of neighboring trees. Surprisingly, we found no evidence that N fixers facilitate biomass regeneration in these forests. At the hectare scale, plots with more N-fixing trees grew slower. At the individual scale, N fixers inhibited their neighbors even more strongly than did nonfixing trees. These results provide strong evidence that N-fixing trees do not always serve the facilitative role to neighboring trees during tropical forest regeneration that is expected given their N inputs into these systems.

A new species of Crossodactylodes (Anura: Leptodactylidae) from Minas Gerais, Brazil: first record of genus within the Espinhaço Mountain Range.

PubMed

Barata, Izabela M; Santos, Marcus T T; Leite, Felipe S F; Garcia, Paulo C A

2013-11-01

The genus Crossodactylodes comprises three species of Atlantic Rainforest endemic frogs strictly dependent on bromeliads where they spend their entire life cycle. The current geographic distribution of the genus covers highland areas of Atlantic Rainforest in the States of Rio de Janeiro and Espírito Santo, Southeastern Brazil. We describe a new species of the genus from Parque Estadual do Pico do Itambé, at Santo Antônio do Itambé municipality, State of Minas Gerais, Southeastern Brazil. Crossodactylodes itambe sp. nov. is characterized by the following combination of traits: male SVL 16.2 ± 1.3 (14.0-17.6 mm, n = 10), female SVL 16.2 ± 1.0 (13.5-18.0 mm, n = 15); snout short, rounded in dorsal view, sloping in lateral view; absence of vocal sac and vocal slits in males; absence of vomerine teeth; males with upper arms and forearms hypertrophied; cloacal flap prominent, simple; dorsal skin coarsely granular. The new species inhabits rupicolous bromeliads in open areas of rocky fields, and is recorded in altitudes between 1836 and 2062 m above sea level. This record extends the genus distribution for about 325 km northwest from where it was known. Crossodactylodes sp. nov. is the only species of the genus that occurs in open field habitats (campos rupestres), in very high altitudes of a non-costal mountain range (the Espinhaço Range). 

Long-term responses of rainforest erosional systems at different spatial scales to selective logging and climatic change

PubMed Central

Walsh, R. P. D.; Bidin, K.; Blake, W. H.; Chappell, N. A.; Clarke, M. A.; Douglas, I.; Ghazali, R.; Sayer, A. M.; Suhaimi, J.; Tych, W.; Annammala, K. V.

2011-01-01

Long-term (21–30 years) erosional responses of rainforest terrain in the Upper Segama catchment, Sabah, to selective logging are assessed at slope, small and large catchment scales. In the 0.44 km2 Baru catchment, slope erosion measurements over 1990–2010 and sediment fingerprinting indicate that sediment sources 21 years after logging in 1989 are mainly road-linked, including fresh landslips and gullying of scars and toe deposits of 1994–1996 landslides. Analysis and modelling of 5–15 min stream-suspended sediment and discharge data demonstrate a reduction in storm-sediment response between 1996 and 2009, but not yet to pre-logging levels. An unmixing model using bed-sediment geochemical data indicates that 49 per cent of the 216 t km−2 a−1 2009 sediment yield comes from 10 per cent of its area affected by road-linked landslides. Fallout 210Pb and 137Cs values from a lateral bench core indicate that sedimentation rates in the 721 km2 Upper Segama catchment less than doubled with initially highly selective, low-slope logging in the 1980s, but rose 7–13 times when steep terrain was logged in 1992–1993 and 1999–2000. The need to keep steeplands under forest is emphasized if landsliding associated with current and predicted rises in extreme rainstorm magnitude-frequency is to be reduced in scale. PMID:22006973

Glacial/Interglacial climate and vegetation history of North-East of Brazil during the last 1.5 Ma and their connection to the Amazonian rainforest

NASA Astrophysics Data System (ADS)

Kern, A.; Baker, P. A.; Cruz, F. W., Sr.; Dwyer, G. S.; Silva, C. G.; Oliveira, A. S.; Willard, D. A.

2016-12-01

Northeastern (NE) Brazil is characterized today by a dry climate and vegetation, which separate the humid forests of the Amazonia from those along the Atlantic coast. Species composition and molecular genetics suggest phases of exchange between these forests in the past and the NE region is the most likely corridor for migration. However, the vegetation history of the NE is largely unknown, leaving questions on the impact of glacial stages on the forest composition and the timing of cyclic transitions from tropical rainforest to semi-arid vegetation or vice versa. Here, we present preliminary results from a marine record recovered from the equatorial Brazilian continental margin covering the last 1.5 Ma. Pollen-based reconstructions across several glacial and interglacial stages provide data on vegetation expansion and retraction of these different biomes. Vegetation changes during drying/cooling events in the NE, which may be linked to movements of the Inter Tropical Convergence Zone or/and intensities of the South American Monsoon System. Increases in terrestrial input to the core site during these climatic events may be of NE origin or Amazon origin. In the latter case, these increases would mark a decrease or reversal of the strength of the North Brazil Current. This study is funded by FAPESP projects 2015/18314-7, 2014/05582-0 and the FAPESPBIOTA/NSF-Dimensions project 2012/50260-6).

Spatially robust estimates of biological nitrogen (N) fixation imply substantial human alteration of the tropical N cycle

USGS Publications Warehouse

Sullivan, Benjamin W.; Smith, William K.; Townsend, Alan R.; Nasto, Megan K.; Reed, Sasha C.; Chazdon, Robin L.; Cleveland, Cory C.

2014-01-01

Biological nitrogen fixation (BNF) is the largest natural source of exogenous nitrogen (N) to unmanaged ecosystems and also the primary baseline against which anthropogenic changes to the N cycle are measured. Rates of BNF in tropical rainforest are thought to be among the highest on Earth, but they are notoriously difficult to quantify and are based on little empirical data. We adapted a sampling strategy from community ecology to generate spatial estimates of symbiotic and free-living BNF in secondary and primary forest sites that span a typical range of tropical forest legume abundance. Although total BNF was higher in secondary than primary forest, overall rates were roughly five times lower than previous estimates for the tropical forest biome. We found strong correlations between symbiotic BNF and legume abundance, but we also show that spatially free-living BNF often exceeds symbiotic inputs. Our results suggest that BNF in tropical forest has been overestimated, and our data are consistent with a recent top-down estimate of global BNF that implied but did not measure low tropical BNF rates. Finally, comparing tropical BNF within the historical area of tropical rainforest with current anthropogenic N inputs indicates that humans have already at least doubled reactive N inputs to the tropical forest biome, a far greater change than previously thought. Because N inputs are increasing faster in the tropics than anywhere on Earth, both the proportion and the effects of human N enrichment are likely to grow in the future.

Combining Ambient Measurements of OH Radicals and OH Reactivity in a Tropical Rainforest during the OP-3 Project: Resolving the Magnitude of the Missing OH Sources and Sinks

NASA Astrophysics Data System (ADS)

Whalley, L. K.; Edwards, P.; Furneaux, K. L.; Goddard, A.; George, I. J.; Evans, M. J.; Heard, D. E.; Team Op-3

2010-12-01

The self cleansing capacity of the troposphere and the lifetime of key greenhouse gases are controlled to a large extent by the OH radical. In environments where biogenic VOC emissions are high and NOx concentrations are low, for example in tropical rainforests, the current understanding of tropospheric chemistry suggests that OH radical concentrations should be suppressed. OH measurements made in such regions, however, have highlighted higher than expected OH radical concentrations that cannot be replicated by chemical models constrained with the currently known OH formation pathways [1]. Here we report OH and OH reactivity measurements made during the OP-3 project that took place in the Borneo rainforest in 2008. Concentrations of OH displayed a clear diurnal cycle, peaking at solar noon, with significant concentrations observed: up to 8.7×106 molecule cm-3 (60 min average). Although j(O1D) levels and humidity were high, low O3 concentrations limited the rate of primary OH production from ozone photolysis. OH reactivity measurements were made using a sliding injector flow-tube reactor technique, with OH detection by LIF. Mean OH reactivities of 15.5 s-1 were observed with daily maximum OH reactivity of 24.7 ± 11.1 s-1 shortly after local solar noon, coinciding with peak isoprene concentrations. Minimum values of 7.2 ± 2.2 s-1 were observed just before sun rise. Using the measured OH and OH reactivity in a constrained box model containing detailed MCM chemistry we are able to fully resolve the magnitude of the missing OH source. We find that significant OH sources must be present - in addition to primary production - in order to maintain the elevated levels of OH levels recorded. Inclusion of an additional OH source formed as a recycled product of isoprene oxidation [2] improves the modelled OH agreement but reduces the modelled to measured HO2 agreement. To replicate both OH and HO2, a process that recycles HO2 to OH is required; equivalent to the OH recycling effect of 0.74 ppbv of NO. The model is unable to account for all of the OH reactivity; to simulate the OH reactivity a range of unmeasured sinks must be invoked. In general we believe that the simultaneous measurement of OH reactivity and OH concentration enables the separation of OH sources and sinks, allowing a more comprehensive test of our understanding of the radical chemistry occurring in this chemically complex environment. [1] J. Lelieveld, T. M. Butler, J. N. Crowley et al.: Nature, 2008, 452, p.737 - 740 [2] J. Peeters, T. L. Nguyen & L. Vereecken, PCCP, 2009, 11, p.5935 - 5939

Shallow phylogeographic structuring of Vimba vimba across Europe suggests two distinct refugia during the last glaciation.

PubMed

Hänfling, B; Dümpelmann, C; Bogutskaya, N G; Brandl, R; Brändle, M

2009-12-01

Genetic variation and geographical structuring of vimba Vimba vimba were analysed across 26 sites (80 individuals) by means of mtDNA sequences (cyt b gene, mitochondrial control region) to localize hypothesized glacial refugia and to reconstruct postglacial recoloniation routes. Although genetic diversity among sequenced individuals was low, a combined analysis of the two sequenced fragments revealed a western (central and northern Europe: Danube, Elbe and lakes of Sweden) and an eastern clade (eastern Europe: Dnieper-South Bug, Don, Neman). Furthermore, a number of divergent ancestral haplotypes distributed around the Black and Caspian Seas became apparent. Mismatch analyses supported a sudden expansion model for the populations of the western clade between 50 and 10 000 bp. Overall, the study provides strong evidence for a northward and westward expansion of V. vimba from two refugial regions located in the Danubian drainage and the northern Pontic regions respectively.

Contemporary genetic structure and postglacial demographic history of the black scorpionfish, Scorpaena porcus, in the Mediterranean and the Black Seas.

PubMed

Boissin, E; Micu, D; Janczyszyn-Le Goff, M; Neglia, V; Bat, L; Todorova, V; Panayotova, M; Kruschel, C; Macic, V; Milchakova, N; Keskin, Ç; Anastasopoulou, A; Nasto, I; Zane, L; Planes, S

2016-05-01

Understanding the distribution of genetic diversity in the light of past demographic events linked with climatic shifts will help to forecast evolutionary trajectories of ecosystems within the current context of climate change. In this study, mitochondrial sequences and microsatellite loci were analysed using traditional population genetic approaches together with Bayesian dating and the more recent approximate Bayesian computation scenario testing. The genetic structure and demographic history of a commercial fish, the black scorpionfish, Scorpaena porcus, was investigated throughout the Mediterranean and Black Seas. The results suggest that the species recently underwent population expansions, in both seas, likely concomitant with the warming period following the Last Glacial Maximum, 20 000 years ago. A weak contemporaneous genetic differentiation was identified between the Black Sea and the Mediterranean Sea. However, the genetic diversity was similar for populations of the two seas, suggesting a high number of colonizers entered the Black Sea during the interglacial period and/or the presence of a refugial population in the Black Sea during the glacial period. Finally, within seas, an east/west genetic differentiation in the Adriatic seems to prevail, whereas the Black Sea does not show any structured spatial genetic pattern of its population. Overall, these results suggest that the Black Sea is not that isolated from the Mediterranean, and both seas revealed similar evolutionary patterns related to climate change and changes in sea level. © 2016 John Wiley & Sons Ltd.

Spatial and topographic trends in forest expansion and biomass change, from regional to local scales.

PubMed

Buma, Brian; Barrett, Tara M

2015-09-01

Natural forest growth and expansion are important carbon sequestration processes globally. Climate change is likely to increase forest growth in some regions via CO2 fertilization, increased temperatures, and altered precipitation; however, altered disturbance regimes and climate stress (e.g. drought) will act to reduce carbon stocks in forests as well. Observations of asynchrony in forest change is useful in determining current trends in forest carbon stocks, both in terms of forest density (e.g. Mg ha(-1) ) and spatially (extent and location). Monitoring change in natural (unmanaged) areas is particularly useful, as while afforestation and recovery from historic land use are currently large carbon sinks, the long-term viability of those sinks depends on climate change and disturbance dynamics at their particular location. We utilize a large, unmanaged biome (>135 000 km(2) ) which spans a broad latitudinal gradient to explore how variation in location affects forest density and spatial patterning: the forests of the North American temperate rainforests in Alaska, which store >2.8 Pg C in biomass and soil, equivalent to >8% of the C in contiguous US forests. We demonstrate that the regional biome is shifting; gains exceed losses and are located in different spatio-topographic contexts. Forest gains are concentrated on northerly aspects, lower elevations, and higher latitudes, especially in sheltered areas, whereas loss is skewed toward southerly aspects and lower latitudes. Repeat plot-scale biomass data (n = 759) indicate that within-forest biomass gains outpace losses (live trees >12.7 cm diameter, 986 Gg yr(-1) ) on gentler slopes and in higher latitudes. This work demonstrates that while temperate rainforest dynamics occur at fine spatial scales (<1000 m(2) ), the net result of thousands of individual events is regionally patterned change. Correlations between the disturbance/establishment imbalance and biomass accumulation suggest the potential for relatively rapid biome shifts and biomass changes. © 2015 John Wiley & Sons Ltd.

In the right place at the right time: habitat representation in protected areas of South American Nothofagus-dominated plants after a dispersal constrained climate change scenario.

PubMed

Alarcón, Diego; Cavieres, Lohengrin A

2015-01-01

In order to assess the effects of climate change in temperate rainforest plants in southern South America in terms of habitat size, representation in protected areas, considering also if the expected impacts are similar for dominant trees and understory plant species, we used niche modeling constrained by species migration on 118 plant species, considering two groups of dominant trees and two groups of understory ferns. Representation in protected areas included Chilean national protected areas, private protected areas, and priority areas planned for future reserves, with two thresholds for minimum representation at the country level: 10% and 17%. With a 10% representation threshold, national protected areas currently represent only 50% of the assessed species. Private reserves are important since they increase up to 66% the species representation level. Besides, 97% of the evaluated species may achieve the minimum representation target only if the proposed priority areas were included. With the climate change scenario representation levels slightly increase to 53%, 69%, and 99%, respectively, to the categories previously mentioned. Thus, the current location of all the representation categories is useful for overcoming climate change by 2050. Climate change impacts on habitat size and representation of dominant trees in protected areas are not applicable to understory plants, highlighting the importance of assessing these effects with a larger number of species. Although climate change will modify the habitat size of plant species in South American temperate rainforests, it will have no significant impact in terms of the number of species adequately represented in Chile, where the implementation of the proposed reserves is vital to accomplish the present and future minimum representation. Our results also show the importance of using migration dispersal constraints to develop more realistic future habitat maps from climate change predictions.

In the Right Place at the Right Time: Habitat Representation in Protected Areas of South American Nothofagus-Dominated Plants after a Dispersal Constrained Climate Change Scenario

PubMed Central

Alarcón, Diego; Cavieres, Lohengrin A.

2015-01-01

In order to assess the effects of climate change in temperate rainforest plants in southern South America in terms of habitat size, representation in protected areas, considering also if the expected impacts are similar for dominant trees and understory plant species, we used niche modeling constrained by species migration on 118 plant species, considering two groups of dominant trees and two groups of understory ferns. Representation in protected areas included Chilean national protected areas, private protected areas, and priority areas planned for future reserves, with two thresholds for minimum representation at the country level: 10% and 17%. With a 10% representation threshold, national protected areas currently represent only 50% of the assessed species. Private reserves are important since they increase up to 66% the species representation level. Besides, 97% of the evaluated species may achieve the minimum representation target only if the proposed priority areas were included. With the climate change scenario representation levels slightly increase to 53%, 69%, and 99%, respectively, to the categories previously mentioned. Thus, the current location of all the representation categories is useful for overcoming climate change by 2050. Climate change impacts on habitat size and representation of dominant trees in protected areas are not applicable to understory plants, highlighting the importance of assessing these effects with a larger number of species. Although climate change will modify the habitat size of plant species in South American temperate rainforests, it will have no significant impact in terms of the number of species adequately represented in Chile, where the implementation of the proposed reserves is vital to accomplish the present and future minimum representation. Our results also show the importance of using migration dispersal constraints to develop more realistic future habitat maps from climate change predictions. PMID:25786226

Intensifying weathering and land use in Iron Age Central Africa.

PubMed

Bayon, Germain; Dennielou, Bernard; Etoubleau, Joël; Ponzevera, Emmanuel; Toucanne, Samuel; Bermell, Sylvain

2012-03-09

About 3000 years ago, a major vegetation change occurred in Central Africa, when rainforest trees were abruptly replaced by savannas. Up to this point, the consensus of the scientific community has been that the forest disturbance was caused by climate change. We show here that chemical weathering in Central Africa, reconstructed from geochemical analyses of a marine sediment core, intensified abruptly at the same period, departing substantially from the long-term weathering fluctuations related to the Late Quaternary climate. Evidence that this weathering event was also contemporaneous with the migration of Bantu-speaking farmers across Central Africa suggests that human land-use intensification at that time had already made a major impact on the rainforest.

Denhaminols A-H, dihydro-β-agarofurans from the endemic Australian rainforest plant Denhamia celastroides.

PubMed

Levrier, Claire; Sadowski, Martin C; Nelson, Colleen C; Healy, Peter C; Davis, Rohan A

2015-01-23

Eight new dihydro-β-agarofurans, denhaminols A-H (1-8), were isolated from the leaves of the Australian rainforest tree Denhamia celastroides. The chemical structures of 1-8 were elucidated following analysis of 1D/2D NMR and MS data. The absolute configuration of denhaminol A (1) was determined by single-crystal X-ray crystallography. All compounds were evaluated for cytotoxic activity against the human prostate cancer cell line LNCaP, using live-cell imaging and metabolic assays. Denhaminols A (1) and G (7) were also tested for their effects on the lipid content of LNCaP cells. This is the first report of secondary metabolites from D. celastroides.

Lowland forest loss in protected areas of Indonesian Borneo.

PubMed

Curran, L M; Trigg, S N; McDonald, A K; Astiani, D; Hardiono, Y M; Siregar, P; Caniago, I; Kasischke, E

2004-02-13

The ecology of Bornean rainforests is driven by El Niño-induced droughts that trigger synchronous fruiting among trees and bursts of faunal reproduction that sustain vertebrate populations. However, many of these species- and carbon-rich ecosystems have been destroyed by logging and conversion, which increasingly threaten protected areas. Our satellite, Geographic Information System, and field-based analyses show that from 1985 to 2001, Kalimantan's protected lowland forests declined by more than 56% (>29,000 square kilometers). Even uninhabited frontier parks are logged to supply international markets. "Protected" forests have become increasingly isolated and deforested and their buffer zones degraded. Preserving the ecological integrity of Kalimantan's rainforests requires immediate transnational management.

Ancient charcoal as a natural archive for paleofire regime and vegetation change in the Mayumbe, Democratic Republic of the Congo

NASA Astrophysics Data System (ADS)

Hubau, Wannes; Van den Bulcke, Jan; Kitin, Peter; Mees, Florias; Baert, Geert; Verschuren, Dirk; Nsenga, Laurent; Van Acker, Joris; Beeckman, Hans

2013-09-01

Charcoal was sampled in four soil profiles at the Mayumbe forest boundary (DRC). Five fire events were recorded and 44 charcoal types were identified. One stratified profile yielded charcoal assemblages around 530 cal yr BP and > 43.5 cal ka BP in age. The oldest assemblage precedes the period of recorded anthropogenic burning, illustrating occasional long-term absence of fire but also natural wildfire occurrences within tropical rainforest. No other charcoal assemblages older than 2500 cal yr BP were recorded, perhaps due to bioturbation and colluvial reworking. The recorded paleofires were possibly associated with short-lived climate anomalies. Progressively dry climatic conditions since ca. 4000 cal yr BP onward did not promote paleofire occurrence until increasing seasonality affected vegetation at the end of the third millennium BP, as illustrated by a fire occurring in mature rainforest that persisted until around 2050 cal yr BP. During a drought episode coinciding with the 'Medieval Climate Anomaly', mature rainforest was locally replaced by woodland savanna. Charcoal remains from pioneer forest indicate that fire hampered forest regeneration after climatic drought episodes. The presence of pottery shards and oil-palm endocarps associated with two relatively recent paleofires suggests that the effects of climate variability were amplified by human activities.

Extent and ecological consequences of hunting in Central African rainforests in the twenty-first century

PubMed Central

Abernethy, K. A.; Coad, L.; Taylor, G.; Lee, M. E.; Maisels, F.

2013-01-01

Humans have hunted wildlife in Central Africa for millennia. Today, however, many species are being rapidly extirpated and sanctuaries for wildlife are dwindling. Almost all Central Africa's forests are now accessible to hunters. Drastic declines of large mammals have been caused in the past 20 years by the commercial trade for meat or ivory. We review a growing body of empirical data which shows that trophic webs are significantly disrupted in the region, with knock-on effects for other ecological functions, including seed dispersal and forest regeneration. Plausible scenarios for land-use change indicate that increasing extraction pressure on Central African forests is likely to usher in new worker populations and to intensify the hunting impacts and trophic cascade disruption already in progress, unless serious efforts are made for hunting regulation. The profound ecological changes initiated by hunting will not mitigate and may even exacerbate the predicted effects of climate change for the region. We hypothesize that, in the near future, the trophic changes brought about by hunting will have a larger and more rapid impact on Central African rainforest structure and function than the direct impacts of climate change on the vegetation. Immediate hunting regulation is vital for the survival of the Central African rainforest ecosystem. PMID:23878333

From ratites to rats: the size of fleshy fruits shapes species' distributions and continental rainforest assembly

PubMed Central

Rossetto, Maurizio; Kooyman, Robert; Yap, Jia-Yee S.; Laffan, Shawn W.

2015-01-01

Seed dispersal is a key process in plant spatial dynamics. However, consistently applicable generalizations about dispersal across scales are mostly absent because of the constraints on measuring propagule dispersal distances for many species. Here, we focus on fleshy-fruited taxa, specifically taxa with large fleshy fruits and their dispersers across an entire continental rainforest biome. We compare species-level results of whole-chloroplast DNA analyses in sister taxa with large and small fruits, to regional plot-based samples (310 plots), and whole-continent patterns for the distribution of woody species with either large (more than 30 mm) or smaller fleshy fruits (1093 taxa). The pairwise genomic comparison found higher genetic distances between populations and between regions in the large-fruited species (Endiandra globosa), but higher overall diversity within the small-fruited species (Endiandra discolor). Floristic comparisons among plots confirmed lower numbers of large-fruited species in areas where more extreme rainforest contraction occurred, and re-colonization by small-fruited species readily dispersed by the available fauna. Species' distribution patterns showed that larger-fruited species had smaller geographical ranges than smaller-fruited species and locations with stable refugia (and high endemism) aligned with concentrations of large fleshy-fruited taxa, making them a potentially valuable conservation-planning indicator. PMID:26645199

Diversity and Structure of Fungal Communities in Neotropical Rainforest Soils: The Effect of Host Recurrence.

PubMed

Schimann, Heidy; Bach, Cyrille; Lengelle, Juliette; Louisanna, Eliane; Barantal, Sandra; Murat, Claude; Buée, Marc

2017-02-01

The patterns of the distribution of fungal species and their potential interactions with trees remain understudied in Neotropical rainforests, which harbor more than 16,000 tree species, mostly dominated by endomycorrhizal trees. Our hypothesis was that tree species shape the non-mycorrhizal fungal assemblages in soil and litter and that the diversity of fungal communities in these two compartments is partly dependent on the coverage of trees in the Neotropical rainforest. In French Guiana, a long-term plantation and a natural forest were selected to test this hypothesis. Fungal ITS1 regions were sequenced from soil and litter samples from within the vicinity of tree species. A broad range of fungal taxa was found, with 42 orders and 14 classes. Significant spatial heterogeneity in the fungal communities was found without strong variation in the species richness and evenness among the tree plots. However, tree species shaped the fungal assemblages in the soil and litter, explaining up to 18 % of the variation among the communities in the natural forest. These results demonstrate that vegetation cover has an important effect on the structure of fungal assemblages inhabiting the soil and litter in Amazonian forests, illustrating the relative impact of deterministic processes on fungal community structures in these highly diverse ecosystems.

Functional Traits and Water Transport Strategies in Lowland Tropical Rainforest Trees.

PubMed

Apgaua, Deborah M G; Ishida, Françoise Y; Tng, David Y P; Laidlaw, Melinda J; Santos, Rubens M; Rumman, Rizwana; Eamus, Derek; Holtum, Joseph A M; Laurance, Susan G W

2015-01-01

Understanding how tropical rainforest trees may respond to the precipitation extremes predicted in future climate change scenarios is paramount for their conservation and management. Tree species clearly differ in drought susceptibility, suggesting that variable water transport strategies exist. Using a multi-disciplinary approach, we examined the hydraulic variability in trees in a lowland tropical rainforest in north-eastern Australia. We studied eight tree species representing broad plant functional groups (one palm and seven eudicot mature-phase, and early-successional trees). We characterised the species' hydraulic system through maximum rates of volumetric sap flow and velocities using the heat ratio method, and measured rates of tree growth and several stem, vessel, and leaf traits. Sap flow measures exhibited limited variability across species, although early-successional species and palms had high mean sap velocities relative to most mature-phase species. Stem, vessel, and leaf traits were poor predictors of sap flow measures. However, these traits exhibited different associations in multivariate analysis, revealing gradients in some traits across species and alternative hydraulic strategies in others. Trait differences across and within tree functional groups reflect variation in water transport and drought resistance strategies. These varying strategies will help in our understanding of changing species distributions under predicted drought scenarios.

From ratites to rats: the size of fleshy fruits shapes species' distributions and continental rainforest assembly.

PubMed

Rossetto, Maurizio; Kooyman, Robert; Yap, Jia-Yee S; Laffan, Shawn W

2015-12-07

Seed dispersal is a key process in plant spatial dynamics. However, consistently applicable generalizations about dispersal across scales are mostly absent because of the constraints on measuring propagule dispersal distances for many species. Here, we focus on fleshy-fruited taxa, specifically taxa with large fleshy fruits and their dispersers across an entire continental rainforest biome. We compare species-level results of whole-chloroplast DNA analyses in sister taxa with large and small fruits, to regional plot-based samples (310 plots), and whole-continent patterns for the distribution of woody species with either large (more than 30 mm) or smaller fleshy fruits (1093 taxa). The pairwise genomic comparison found higher genetic distances between populations and between regions in the large-fruited species (Endiandra globosa), but higher overall diversity within the small-fruited species (Endiandra discolor). Floristic comparisons among plots confirmed lower numbers of large-fruited species in areas where more extreme rainforest contraction occurred, and re-colonization by small-fruited species readily dispersed by the available fauna. Species' distribution patterns showed that larger-fruited species had smaller geographical ranges than smaller-fruited species and locations with stable refugia (and high endemism) aligned with concentrations of large fleshy-fruited taxa, making them a potentially valuable conservation-planning indicator. © 2015 The Author(s).

Trophic flexibility and the persistence of understory birds in intensively logged rainforest.

PubMed

Edwards, David P; Woodcock, Paul; Newton, Rob J; Edwards, Felicity A; Andrews, David J R; Docherty, Teegan D S; Mitchell, Simon L; Ota, Takahiro; Benedick, Suzan; Bottrell, Simon H; Hamer, Keith C

2013-10-01

Effects of logging on species composition in tropical rainforests are well known but may fail to reveal key changes in species interactions. We used nitrogen stable-isotope analysis of 73 species of understory birds to quantify trophic responses to repeated intensive logging of rainforest in northern Borneo and to test 4 hypotheses: logging has significant effects on trophic positions and trophic-niche widths of species, and the persistence of species in degraded forest is related to their trophic positions and trophic-niche widths in primary forest. Species fed from higher up the food chain and had narrower trophic-niche widths in degraded forest. Species with narrow trophic-niche widths in primary forest were less likely to persist after logging, a result that indicates a higher vulnerability of dietary specialists to local extinction following habitat disturbance. Persistence of species in degraded forest was not related to a species' trophic position. These results indicate changes in trophic organization that were not apparent from changes in species composition and highlight the importance of focusing on trophic flexibility over the prevailing emphasis on membership of static feeding guilds. Our results thus support the notion that alterations to trophic organization and interactions within tropical forests may be a pervasive and functionally important hidden effect of forest degradation. © 2013 Society for Conservation Biology.

Nutrition or Detoxification: Why Bats Visit Mineral Licks of the Amazonian Rainforest

PubMed Central

Voigt, Christian C.; Capps, Krista A.; Dechmann, Dina K. N.; Michener, Robert H.; Kunz, Thomas H.

2008-01-01

Many animals in the tropics of Africa, Asia and South America regularly visit so-called salt or mineral licks to consume clay or drink clay-saturated water. Whether this behavior is used to supplement diets with locally limited nutrients or to buffer the effects of toxic secondary plant compounds remains unclear. In the Amazonian rainforest, pregnant and lactating bats are frequently observed and captured at mineral licks. We measured the nitrogen isotope ratio in wing tissue of omnivorous short-tailed fruit bats, Carollia perspicillata, and in an obligate fruit-eating bat, Artibeus obscurus, captured at mineral licks and at control sites in the rainforest. Carollia perspicillata with a plant-dominated diet were more often captured at mineral licks than individuals with an insect-dominated diet, although insects were more mineral depleted than fruits. In contrast, nitrogen isotope ratios of A. obscurus did not differ between individuals captured at mineral lick versus control sites. We conclude that pregnant and lactating fruit-eating bats do not visit mineral licks principally for minerals, but instead to buffer the effects of secondary plant compounds that they ingest in large quantities during periods of high energy demand. These findings have potential implications for the role of mineral licks for mammals in general, including humans. PMID:18431492

Comparative height crown allometry and mechanical design in 22 tree species of Kuala Belalong rainforest, Brunei, Borneo.

PubMed

Osunkoya, Olusegun O; Omar-Ali, Kharunnisa; Amit, Norratna; Dayan, Juita; Daud, Dayanawati S; Sheng, Tan K

2007-12-01

In rainforests, trunk size, strength, crown position, and geometry of a tree affect light interception and the likelihood of mechanical failure. Allometric relationships of tree diameter, wood density, and crown architecture vs. height are described for a diverse range of rainforest trees in Brunei, northern Borneo. The understory species follow a geometric model in their diameter-height relationship (slope, β = 1.08), while the stress-elasticity models prevail (β = 1.27-1.61) for the midcanopy and canopy/emergent species. These relationships changed with ontogeny, especially for the understory species. Within species, the tree stability safety factor (SSF) and relative crown width decreased exponentially with increasing tree height. These trends failed to emerge in across-species comparisons and were reversed at a common (low) height. Across species, the relative crown depth decreased with maximum potential height and was indistinguishable at a common (low) height. Crown architectural traits influence SSF more than structural property of wood density. These findings emphasize the importance of applying a common reference size in comparative studies and suggest that forest trees (especially the understory group) may adapt to low light by having deeper rather than wider crowns due to an efficient distribution and geometry of their foliage.

Hydraulic Strategies and Response to El Niño Drought in Amazon Rainforest

NASA Astrophysics Data System (ADS)

Ivanov, V. Y.; Oliveira, R. S.; Brum, M., Jr.; Prohaska, N.; Albert, L.; Taylor, T.; Fatichi, S.; Agee, E.; Saleska, S. R.; Oliveira Junior, R. C.; Dye, D. G.; Wiedemann, K. T.

2016-12-01

Variability of tree-scale carbon and water uptake strategies is increasingly recognized to be of paramount importance for understanding the limits of drought resilience of tropical rainforests. Here, we present evidence of such variations using a set of ecohydrologic data collected through the DOE "GoAmazon" project, with a specific emphasis on the response of a seasonal rainforest in eastern Amazonia to the strong 2015 El Niño drought. Data from 50 sapflow sensors are combined with high-frequency observations on stem and leaf water potential as well as precision dendrometry. The emerging behavior shows a spectrum of successfully co-existing hydraulic strategies, ranging from tight control against xylem failure to a near lack of regulation of the water flux through the stomata, implying the existence of other mechanisms to deal with extreme tissue dehydration. These strategies also exhibit coupling with tree growth patterns and dynamics of non-structural carbohydrates, with the latter type of trees allocating more carbon to growth and less to internal reserves, while the opposite is true for the former tree type. The results suggest a new approach for integrating hydraulic traits and carbon-cycle dynamics, and a strategy for mapping traits to function in the next generation of predictive models of ecosystem dynamics.

Functional Traits and Water Transport Strategies in Lowland Tropical Rainforest Trees

PubMed Central

Apgaua, Deborah M. G.; Ishida, Françoise Y.; Tng, David Y. P.; Laidlaw, Melinda J.; Santos, Rubens M.; Rumman, Rizwana; Eamus, Derek; Holtum, Joseph A. M.; Laurance, Susan G. W.

2015-01-01

Understanding how tropical rainforest trees may respond to the precipitation extremes predicted in future climate change scenarios is paramount for their conservation and management. Tree species clearly differ in drought susceptibility, suggesting that variable water transport strategies exist. Using a multi-disciplinary approach, we examined the hydraulic variability in trees in a lowland tropical rainforest in north-eastern Australia. We studied eight tree species representing broad plant functional groups (one palm and seven eudicot mature-phase, and early-successional trees). We characterised the species’ hydraulic system through maximum rates of volumetric sap flow and velocities using the heat ratio method, and measured rates of tree growth and several stem, vessel, and leaf traits. Sap flow measures exhibited limited variability across species, although early-successional species and palms had high mean sap velocities relative to most mature-phase species. Stem, vessel, and leaf traits were poor predictors of sap flow measures. However, these traits exhibited different associations in multivariate analysis, revealing gradients in some traits across species and alternative hydraulic strategies in others. Trait differences across and within tree functional groups reflect variation in water transport and drought resistance strategies. These varying strategies will help in our understanding of changing species distributions under predicted drought scenarios. PMID:26087009

Death from drought in tropical forests is triggered by hydraulics not carbon starvation

NASA Astrophysics Data System (ADS)

Rowland, L.; da Costa, A. C. L.; Galbraith, D. R.; Oliveira, R. S.; Binks, O. J.; Oliveira, A. A. R.; Pullen, A. M.; Doughty, C. E.; Metcalfe, D. B.; Vasconcelos, S. S.; Ferreira, L. V.; Malhi, Y.; Grace, J.; Mencuccini, M.; Meir, P.

2015-12-01

Drought threatens tropical rainforests over seasonal to decadal timescales, but the drivers of tree mortality following drought remain poorly understood. It has been suggested that reduced availability of non-structural carbohydrates (NSC) critically increases mortality risk through insufficient carbon supply to metabolism (‘carbon starvation’). However, little is known about how NSC stores are affected by drought, especially over the long term, and whether they are more important than hydraulic processes in determining drought-induced mortality. Using data from the world’s longest-running experimental drought study in tropical rainforest (in the Brazilian Amazon), we test whether carbon starvation or deterioration of the water-conducting pathways from soil to leaf trigger tree mortality. Biomass loss from mortality in the experimentally droughted forest increased substantially after >10 years of reduced soil moisture availability. The mortality signal was dominated by the death of large trees, which were at a much greater risk of hydraulic deterioration than smaller trees. However, we find no evidence that the droughted trees suffered carbon starvation, as their NSC concentrations were similar to those of non-droughted trees, and growth rates did not decline in either living or dying trees. Our results indicate that hydraulics, rather than carbon starvation, triggers tree death from drought in tropical rainforest.

An UV-sensitive anuran species as an indicator of environmental quality of the Southern Atlantic Rainforest.

PubMed

Lipinski, Victor Mendes; Santos, Tiago Gomes Dos; Schuch, André Passaglia

2016-12-01

The Southern Atlantic rainforest is continuously suffering from wood extraction activity, which results in the increase of clearings within the forest. Although the direct impacts of deforestation on landscape are already well described, there is an absence of studies focused on the evaluation of its indirect effects, such as the increase of solar UV radiation levels inside forest environment and its consequences for forest specialist anuran species. The results presented in this work clearly show that the threatened tree frog species Hypsiboas curupi presents severe traits of sensitivity to UV wavelengths of sunlight, making it a vulnerable species to this environmental stressor, as well as a biological indicator of the quality of forest canopy coverage. In addition, the measurement of solar UVB and UVA radiation incidence upon H. curupi breeding site and the analyses of a 20-year dataset of satellite images regarding the management of canopy coverage indicate that the photoprotection provided by trees of the Southern Atlantic rainforest is critical for the conservation of this forest specialist anuran species. Therefore, this work demonstrates that the deforestation process enhances the exposure of H. curupi embryos to solar UVB and UVA radiation, negatively affecting their embryonic development, inducing mortality and population decline. Copyright © 2016 Elsevier B.V. All rights reserved.

Early Response of Soil Properties and Function to Riparian Rainforest Restoration

PubMed Central

Gageler, Rose; Bonner, Mark; Kirchhof, Gunnar; Amos, Mark; Robinson, Nicole; Schmidt, Susanne; Shoo, Luke P.

2014-01-01

Reforestation of riparian zones is increasingly practiced in many regions for purposes of biodiversity conservation, bank stabilisation, and improvement in water quality. This is in spite of the actual benefits of reforestation for recovering underlying soil properties and function remaining poorly understood. Here we compare remnant riparian rainforest, pasture and reforestation plantings aged 2–20 years in an Australian subtropical catchment on ferrosols to determine the extent to which reforestation restores key soil properties. Of the nine soil attributes measured (total nitrogen, nitrate and ammonium concentrations, net nitrification and ammonification rates, organic carbon, bulk density, fine root biomass and water infiltration rates), only infiltration rates were significantly lower in pasture than remnant riparian rainforest. Within reforestation plantings, bulk density decreased up to 1.4-fold and infiltration rates increased up to 60-fold with time post-reforestation. Our results suggest that the main outcome of belowground processes of early reforestation is the recovery of the soils' physical structure, with potential beneficial ecosystem services including reduced runoff, erosion and associated sediment and nutrient loads in waterways. We also demonstrate differential impacts of two commonly planted tree species on a subset of soil properties suggesting that preferential planting of select species could accelerate progress on specific restoration objectives. PMID:25117589

Extent and ecological consequences of hunting in Central African rainforests in the twenty-first century.

PubMed

Abernethy, K A; Coad, L; Taylor, G; Lee, M E; Maisels, F

2013-01-01

Humans have hunted wildlife in Central Africa for millennia. Today, however, many species are being rapidly extirpated and sanctuaries for wildlife are dwindling. Almost all Central Africa's forests are now accessible to hunters. Drastic declines of large mammals have been caused in the past 20 years by the commercial trade for meat or ivory. We review a growing body of empirical data which shows that trophic webs are significantly disrupted in the region, with knock-on effects for other ecological functions, including seed dispersal and forest regeneration. Plausible scenarios for land-use change indicate that increasing extraction pressure on Central African forests is likely to usher in new worker populations and to intensify the hunting impacts and trophic cascade disruption already in progress, unless serious efforts are made for hunting regulation. The profound ecological changes initiated by hunting will not mitigate and may even exacerbate the predicted effects of climate change for the region. We hypothesize that, in the near future, the trophic changes brought about by hunting will have a larger and more rapid impact on Central African rainforest structure and function than the direct impacts of climate change on the vegetation. Immediate hunting regulation is vital for the survival of the Central African rainforest ecosystem.

Early response of soil properties and function to riparian rainforest restoration.

PubMed

Gageler, Rose; Bonner, Mark; Kirchhof, Gunnar; Amos, Mark; Robinson, Nicole; Schmidt, Susanne; Shoo, Luke P

2014-01-01

Reforestation of riparian zones is increasingly practiced in many regions for purposes of biodiversity conservation, bank stabilisation, and improvement in water quality. This is in spite of the actual benefits of reforestation for recovering underlying soil properties and function remaining poorly understood. Here we compare remnant riparian rainforest, pasture and reforestation plantings aged 2-20 years in an Australian subtropical catchment on ferrosols to determine the extent to which reforestation restores key soil properties. Of the nine soil attributes measured (total nitrogen, nitrate and ammonium concentrations, net nitrification and ammonification rates, organic carbon, bulk density, fine root biomass and water infiltration rates), only infiltration rates were significantly lower in pasture than remnant riparian rainforest. Within reforestation plantings, bulk density decreased up to 1.4-fold and infiltration rates increased up to 60-fold with time post-reforestation. Our results suggest that the main outcome of belowground processes of early reforestation is the recovery of the soils' physical structure, with potential beneficial ecosystem services including reduced runoff, erosion and associated sediment and nutrient loads in waterways. We also demonstrate differential impacts of two commonly planted tree species on a subset of soil properties suggesting that preferential planting of select species could accelerate progress on specific restoration objectives.

Coral reef fish smell leaves to find island homes.

PubMed

Dixson, Danielle L; Jones, Geoffrey P; Munday, Philip L; Planes, Serge; Pratchett, Morgan S; Srinivasan, Maya; Syms, Craig; Thorrold, Simon R

2008-12-22

Recent studies have shown that some coral reef fish larvae return to natal reefs, while others disperse to distant reefs. However, the sensory mechanisms used to find settlement sites are poorly understood. One hypothesis is that larvae use olfactory cues to navigate home or find other suitable reef habitats. Here we show a strong association between the clownfish Amphiprion percula and coral reefs surrounding offshore islands in Papua New Guinea. Host anemones and A. percula are particularly abundant in shallow water beneath overhanging rainforest vegetation. A series of experiments were carried out using paired-choice flumes to evaluate the potential role of water-borne olfactory cues in finding islands. Recently settled A. percula exhibited strong preferences for: (i) water from reefs with islands over water from reefs without islands; (ii) water collected near islands over water collected offshore; and (iii) water treated with either anemones or leaves from rainforest vegetation. Laboratory reared-juveniles exhibited the same positive response to anemones and rainforest vegetation, suggesting that olfactory preferences are innate rather than learned. We hypothesize that A. percula use a suite of olfactory stimuli to locate vegetated islands, which may explain the high levels of self-recruitment on island reefs. This previously unrecognized link between coral reefs and island vegetation argues for the integrated management of these pristine tropical habitats.

Contrasting biogeochemical characteristics of the Oubangui River and tributaries (Congo River basin)

PubMed Central

Bouillon, Steven; Yambélé, Athanase; Gillikin, David P.; Teodoru, Cristian; Darchambeau, François; Lambert, Thibault; Borges, Alberto V.

2014-01-01

The Oubangui is a major tributary of the Congo River. We describe the biogeochemistry of contrasting tributaries within its central catchment, with watershed vegetation ranging from wooded savannahs to humid rainforest. Compared to a 2-year monitoring record on the mainstem Oubangui, these tributaries show a wide range of biogeochemical signatures, from highly diluted blackwaters (low turbidity, pH, conductivity, and total alkalinity) in rainforests to those more typical for savannah systems. Spectral analyses of chromophoric dissolved organic matter showed wide temporal variations in the Oubangui compared to spatio-temporal variations in the tributaries, and confirm that different pools of dissolved organic carbon are mobilized during different hydrological stages. δ13C of dissolved inorganic carbon ranged between −28.1‰ and −5.8‰, and was strongly correlated to both partial pressure of CO2 and to the estimated contribution of carbonate weathering to total alkalinity, suggesting an important control of the weathering regime on CO2 fluxes. All tributaries were oversaturated in dissolved greenhouse gases (CH4, N2O, CO2), with highest levels in rivers draining rainforest. The high diversity observed underscores the importance of sampling that covers the variability in subcatchment characteristics, to improve our understanding of biogeochemical cycling in the Congo Basin. PMID:24954525

Use of the paca, Cuniculus paca (Rodentia: Agoutidae) in the Sierra de Tabasco State Park, Mexico.

PubMed

Gallina, Sonia; Pérez-Torres, Jairo; Guzmán-Aguirre, Carlos César

2012-09-01

Cuniculus paca is widely distributed throughout the Neotropics. Known as the paca, it is the largest rodent in the Mexican tropical forests, and one of the most used as a subsistence species for its meat. Since colonial times, this species has been subject of an unreported hunting pressure. For this reason, the aim of this work was to describe the use of the paca by the inhabitants of the Sierra de Tabasco State Park (STSP) using sampling areas in a matrix of vegetation with different degrees of disturbance, and different types of land use. We included both preserved areas: owing to the presence of large continuous areas of fragmented rainforest and areas that are not preserved, with smaller rainforest fragments and more isolated. To obtain information about paca use, we interviewed 176 people (>18 years old) who live in the STSP. All those interviewed had eaten paca meat, and indicated that this species is most frequently observed in the rainforest during the dry season. Hunting and trapping were the most common ways to obtain pacas, rather than gifting or purchasing, and firearms and dogs are used to hunt them. We estimated that these interviewed group had hunted a total of 488 paca in the year prior to the study.

Death from drought in tropical forests is triggered by hydraulics not carbon starvation.

PubMed

Rowland, L; da Costa, A C L; Galbraith, D R; Oliveira, R S; Binks, O J; Oliveira, A A R; Pullen, A M; Doughty, C E; Metcalfe, D B; Vasconcelos, S S; Ferreira, L V; Malhi, Y; Grace, J; Mencuccini, M; Meir, P

2015-12-03

Drought threatens tropical rainforests over seasonal to decadal timescales, but the drivers of tree mortality following drought remain poorly understood. It has been suggested that reduced availability of non-structural carbohydrates (NSC) critically increases mortality risk through insufficient carbon supply to metabolism ('carbon starvation'). However, little is known about how NSC stores are affected by drought, especially over the long term, and whether they are more important than hydraulic processes in determining drought-induced mortality. Using data from the world's longest-running experimental drought study in tropical rainforest (in the Brazilian Amazon), we test whether carbon starvation or deterioration of the water-conducting pathways from soil to leaf trigger tree mortality. Biomass loss from mortality in the experimentally droughted forest increased substantially after >10 years of reduced soil moisture availability. The mortality signal was dominated by the death of large trees, which were at a much greater risk of hydraulic deterioration than smaller trees. However, we find no evidence that the droughted trees suffered carbon starvation, as their NSC concentrations were similar to those of non-droughted trees, and growth rates did not decline in either living or dying trees. Our results indicate that hydraulics, rather than carbon starvation, triggers tree death from drought in tropical rainforest.

Coral reef fish smell leaves to find island homes

PubMed Central

Dixson, Danielle L; Jones, Geoffrey P; Munday, Philip L; Planes, Serge; Pratchett, Morgan S; Srinivasan, Maya; Syms, Craig; Thorrold, Simon R

2008-01-01

Recent studies have shown that some coral reef fish larvae return to natal reefs, while others disperse to distant reefs. However, the sensory mechanisms used to find settlement sites are poorly understood. One hypothesis is that larvae use olfactory cues to navigate home or find other suitable reef habitats. Here we show a strong association between the clownfish Amphiprion percula and coral reefs surrounding offshore islands in Papua New Guinea. Host anemones and A. percula are particularly abundant in shallow water beneath overhanging rainforest vegetation. A series of experiments were carried out using paired-choice flumes to evaluate the potential role of water-borne olfactory cues in finding islands. Recently settled A. percula exhibited strong preferences for: (i) water from reefs with islands over water from reefs without islands; (ii) water collected near islands over water collected offshore; and (iii) water treated with either anemones or leaves from rainforest vegetation. Laboratory reared-juveniles exhibited the same positive response to anemones and rainforest vegetation, suggesting that olfactory preferences are innate rather than learned. We hypothesize that A. percula use a suite of olfactory stimuli to locate vegetated islands, which may explain the high levels of self-recruitment on island reefs. This previously unrecognized link between coral reefs and island vegetation argues for the integrated management of these pristine tropical habitats. PMID:18755672

Cloudiness over the Amazon rainforest: Meteorology and thermodynamics

NASA Astrophysics Data System (ADS)

Collow, Allison B. Marquardt; Miller, Mark A.; Trabachino, Lynne C.

2016-07-01

Comprehensive meteorological observations collected during GOAmazon2014/15 using the Atmospheric Radiation Measurement Mobile Facility no. 1 and assimilated observations from the Modern-Era Retrospective Analysis for Research and Applications, Version 2 are used to document the seasonal cycle of cloudiness, thermodynamics, and precipitation above the Amazon rainforest. The reversal of synoptic-scale vertical motions modulates the transition between the wet and dry seasons. Ascending moist air during the wet season originates near the surface of the Atlantic Ocean and is advected into the Amazon rainforest, where it experiences convergence and, ultimately, precipitates. The dry season is characterized by weaker winds and synoptic-scale subsidence with little or no moisture convergence accompanying moisture advection. This combination results in the drying of the midtroposphere during June through October as indicated by a decrease in liquid water path, integrated water, and the vertical profile of water vapor mixing ratio. The vertical profile of cloud fraction exhibits a relatively consistent decline in cloud fraction from the lifting condensation level (LCL) to the freezing level where a minimum is observed, unlike many other tropical regions. Coefficients of determination between the LCL and cloud fractional coverage suggest a relatively robust relationship between the LCL and cloudiness beneath 5 km during the dry season (R2 = 0.42) but a weak relationship during the wet season (0.12).

Estimating Amazonian rainforest stability and the likelihood for large-scale forest dieback

NASA Astrophysics Data System (ADS)

Rammig, Anja; Thonicke, Kirsten; Jupp, Tim; Ostberg, Sebastian; Heinke, Jens; Lucht, Wolfgang; Cramer, Wolfgang; Cox, Peter

2010-05-01

Annually, tropical forests process approximately 18 Pg of carbon through respiration and photosynthesis - more than twice the rate of anthropogenic fossil fuel emissions. Current climate change may be transforming this carbon sink into a carbon source by changing forest structure and dynamics. Increasing temperatures and potentially decreasing precipitation and thus prolonged drought stress may lead to increasing physiological stress and reduced productivity for trees. Resulting decreases in evapotranspiration and therefore convective precipitation could further accelerate drought conditions and destabilize the tropical ecosystem as a whole and lead to an 'Amazon forest dieback'. The projected direction and intensity of climate change vary widely within the region and between different scenarios from climate models (GCMs). In the scope of a World Bank-funded study, we assessed the 24 General Circulation Models (GCMs) evaluated in the 4th Assessment Report of the Intergovernmental Panel on Climate Change (IPCC-AR4) with respect to their capability to reproduce present-day climate in the Amazon basin using a Bayesian approach. With this approach, greater weight is assigned to the models that simulate well the annual cycle of rainfall. We then use the resulting weightings to create probability density functions (PDFs) for future forest biomass changes as simulated by the Lund-Potsdam-Jena Dynamic Global Vegetation Model (LPJmL) to estimate the risk of potential Amazon rainforest dieback. Our results show contrasting changes in forest biomass throughout five regions of northern South America: If photosynthetic capacity and water use efficiency is enhanced by CO2, biomass increases across all five regions. However, if CO2-fertilisation is assumed to be absent or less important, then substantial dieback occurs in some scenarios and thus, the risk of forest dieback is considerably higher. Particularly affected are regions in the central Amazon basin. The range of potential biomass change arising from the weighting of rainfall patterns is smaller than the uncertainty arising from CO2-fertilisation effects, which highlights the importance of reducing the uncertainties in the direct effects of CO2 on tropical ecosystems. Strong biomass changes also imply changes in forest structure and thus, forest stability. Our results display shifts in forest composition from closed rainforest to more open forest or even shrubland. Our probability-based risk analysis could be used to advise regional forest protection.

Using Multi-Isotope Tracer Methods to Understand the Sources of Nitrate in Aerosols, Fog and River Water in Podocarpus National Forest, Ecuador

NASA Astrophysics Data System (ADS)

Brothers, L. A.; Dominguez, G.; Fabian, P.; Thiemens, M. H.

2008-12-01

The eastern slopes of the Andean rainforests of Ecuador possess some of the highest plant biodiversity found on the planet; however, these ecosystems are in jeopardy because region is experiences one of the highest deforestation rates in South America. This rainforest characterized by high acidity and low nutrient soils and experiences natural process which are both destabilizing and stabilizing to biodiversity rendering this a unique, though sensitive environment. There is increased concern that anthropogenic activities especially biomass burning are affecting the rainforests and could lead to higher extinction rates, changes in the biodiversity and far reaching effects on the global troposphere. Measurements of nitrate and sulfate in rain and fog water have shown periods of elevated concentrations in the Podocarpus National Park near Loja, Ecuador. These high episodes contribute to annual deposition rates that are comparable to polluted regions of North America and Europe. Significant anthropogenic sources such as large scale industry or a major city, near this forest are lacking. It is believed that the majority of the nitrate and sulfate pollution is due to the large amount of biomass burning during the dry season in the Amazon Basin. In recent years it has been shown that large amount of dust is transported across the Atlantic from Africa which reaches South America. Concentration measurements do not elucidate the source of high nitrate and sulfate pollution; however, by measuring all three stable isotopes of oxygen in nitrate and sulfate from fog and river water provides a new way to examine the impacts of biomass burning on the region. By using stable isotope techniques atmospheric nitrate and sulfate can be resolved from terrestrial sources. This provides a unique way to trace the contributions from the biomass burning and farming sources. Current research at the field station, Estación Científica San Francisco in the Podocarpus National Forest monitors sulfate and nitrate concentrations in rain and fog water by standard methods to investigate water and nutrient pathways along with data from satellite and ground based remote sensing, observations and numerical models. We hope to pair this with a multi-isotope tracer method and NOAA Hysplit Back trajectories, and satellite imagery for information about the number of fires burning in the region to help identify sources of the high nitrate deposition.

Ecological correlates of cortisol levels in two bat species with contrasting feeding habits.

PubMed

Lewanzik, Daniel; Kelm, Detlev H; Greiner, Sabine; Dehnhard, Martin; Voigt, Christian C

2012-05-15

The immediate release of adrenal glucocorticoids can be crucial for an animal's survival when facing a stressor, but constantly elevated or exceptionally high glucocorticoid levels are usually detrimental for health. Although baseline and maximal secretion of glucocorticoids are regulated within narrow ranges within species, plasma glucocorticoid levels vary largely across vertebrates. We asked what ecological factors affect baseline plasma cortisol levels (CortI) and maximum levels (CortMax) following a physiological challenge through administration of adrenocorticotropic hormone (ACTH). Specifically, we studied whether seasonal fluctuations in food abundance correlate with the capacity of cortisol increases in two phyllostomid bat species with contrasting feeding habits: the sanguinivorous vampire bat (Desmodus rotundus) and the frugivorous short-tailed fruit bat (Carollia perspicillata). Both species coexist in habitats with various levels of seasonality (dry and rainforest). On a seasonal basis, resource abundance is more stable for vampire than for fruit bats, but previous studies suggested that daily foraging success may vary more for vampire than for fruit bats. CortI and CortMax varied seasonally in C. perspicillata from dry and rainforests, with the exception of CortMax in rainforest bats. Although we expected food availability to be stable year-round for vampire bats, we found CortI and CortMax of vampires to be higher during the rainy season than during the dry season. Also, we found CortMax to be higher in vampires from the rainforest than in those from the dry forest. CortMax of vampires were among the highest measured for a free-ranging mammal; a pattern that could be related to the species' vulnerability to starvation. We conclude that food availability modulates cortisol levels in free-ranging species that face seasonally fluctuating resources; in species, however, that benefit from food which is constantly abundant, other factors than food may become more important in modulating cortisol levels. Copyright © 2012 Elsevier Inc. All rights reserved.

Rickettsia (Rickettsiales: Rickettsiaceae) Vector Biodiversity in High Altitude Atlantic Forest Fragments Within a Semiarid Climate: A New Endemic Area of Spotted-Fever in Brazil.

PubMed

Moerbeck, Leonardo; Vizzoni, Vinícius F; Machado-Ferreira, Erik; Cavalcante, Robson C; Oliveira, Stefan V; Soares, Carlos A G; Amorim, Marinete; Gazêta, Gilberto S

2016-11-01

Rickettsioses are re-emerging vector-borne zoonoses with a global distribution. Recently, Rickettsia sp. strain Atlantic rainforest has been associated with new human spotted-fever (SF) cases in Brazil, featuring particular clinical signs: eschar formation and lymphadenopathy. These cases have been associated with the tick species, Amblyomma ovale From 2010 until 2015, the Brazilian Health Department confirmed 11 human SF cases in the Maciço de Baturité region, Ceará, Brazil. The present study reports the circulation of Rickettsia spp. in vectors from this entirely new endemic area for SF. A total of 1,727 ectoparasites were collected in this area from the environment, humans, and wild and domestic animals. Samples (n = 887) were screened by polymerase chain reaction (PCR), targeting the gltA and ompA rickettsial genes. Sequencing and phylogenetic analyses of gltA gene amplicons were carried out for 13 samples positive for both screening PCRs. Fragments of gltA and ompA from three samples were cloned, sequenced, and analyzed further. A. ovale and Rhipicephalus sanguineus specimens, collected from dogs, were found to be infected with Rickettsia sp. str. Atlantic rainforest, suggesting the importance of dogs in the epidemic cycle. Candidatus Rickettsia andeanae, Rickettsia felis, and Rickettsia bellii were also found infecting ticks and fleas in five municipalities, demonstrating the broad diversity of rickettsiae in circulation in the studied area. This study reports, for the first time, evidence of infection with Rickettsia sp. strain Atlantic rainforest in A. ovale and R. sanguineus in Ceará, and Ca. R. andeanae in an Atlantic rainforest environment of Brazil. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Soil, water, and nutrient losses from management alternatives for degraded pasture in Brazilian Atlantic Rainforest biome.

PubMed

Rocha Junior, Paulo Roberto da; Andrade, Felipe Vaz; Mendonça, Eduardo de Sá; Donagemma, Guilherme Kangussú; Fernandes, Raphael Bragança Alves; Bhattharai, Rabin; Kalita, Prasanta Kumar

2017-04-01

The objective of this study was to evaluate sediment, water and nutrient losses from different pasture managements in the Atlantic Rainforest biome. A field study was carried out in Alegre Espiríto Santo, Brazil, on a Xanthic Ferralsol cultivated with braquiaria (Brachiaria brizantha). The six pasture managements studied were: control (CON), chisel (CHI), fertilizer (FER), burned (BUR), plowing and harrowing (PH), and integrated crop-livestock (iCL). Runoff and sediment samples were collected and analyzed for calcium (Ca), magnesium (Mg), potassium (K), phosphorus (P) and organic carbon contents. Soil physical attributes and above and below biomass were also evaluated. The results indicated that higher water loss was observed for iCL (129.90mm) and CON (123.25mm) managements, and the sediment losses were higher for CON (10.24tha -1 ) and BUR (5.20tha -1 ) managements when compared to the other managements. Majority of the nutrients losses occurred in dissolved fraction (99% of Ca, 99% of Mg, 96% of K, and 65% of P), whereas a significant fraction of organic carbon (80%) loss occurred in a particulate form. Except for P, other nutrients (Ca, Mg and K) and organic carbon losses were higher in coarse sediment compared to fine sediment. The greater losses of sediment, organic carbon, and nutrients were observed for CON followed by BUR management (p<0.05). Our findings indicated that the traditional pasture management adopted in the Atlantic Rainforest needs to be rethought and burned management should be avoided. Based on the water, soil, and nutrient losses from various practices, to reduce pasture degradation, farmers should adopt edaphic practices by applying lime and fertilize to improve pasture growth and soil cover, and reducing soil erosion in the hilly Brazilian Atlantic Rainforest biome. Copyright © 2016. Published by Elsevier B.V.

Spatial Structure of Above-Ground Biomass Limits Accuracy of Carbon Mapping in Rainforest but Large Scale Forest Inventories Can Help to Overcome.

PubMed

Guitet, Stéphane; Hérault, Bruno; Molto, Quentin; Brunaux, Olivier; Couteron, Pierre

2015-01-01

Precise mapping of above-ground biomass (AGB) is a major challenge for the success of REDD+ processes in tropical rainforest. The usual mapping methods are based on two hypotheses: a large and long-ranged spatial autocorrelation and a strong environment influence at the regional scale. However, there are no studies of the spatial structure of AGB at the landscapes scale to support these assumptions. We studied spatial variation in AGB at various scales using two large forest inventories conducted in French Guiana. The dataset comprised 2507 plots (0.4 to 0.5 ha) of undisturbed rainforest distributed over the whole region. After checking the uncertainties of estimates obtained from these data, we used half of the dataset to develop explicit predictive models including spatial and environmental effects and tested the accuracy of the resulting maps according to their resolution using the rest of the data. Forest inventories provided accurate AGB estimates at the plot scale, for a mean of 325 Mg.ha-1. They revealed high local variability combined with a weak autocorrelation up to distances of no more than10 km. Environmental variables accounted for a minor part of spatial variation. Accuracy of the best model including spatial effects was 90 Mg.ha-1 at plot scale but coarse graining up to 2-km resolution allowed mapping AGB with accuracy lower than 50 Mg.ha-1. Whatever the resolution, no agreement was found with available pan-tropical reference maps at all resolutions. We concluded that the combined weak autocorrelation and weak environmental effect limit AGB maps accuracy in rainforest, and that a trade-off has to be found between spatial resolution and effective accuracy until adequate "wall-to-wall" remote sensing signals provide reliable AGB predictions. Waiting for this, using large forest inventories with low sampling rate (<0.5%) may be an efficient way to increase the global coverage of AGB maps with acceptable accuracy at kilometric resolution.

Trends in nitrogen and phosphorus cycling are consistent and constrained during tropical secondary forest succession: is secondary forest young primary forest from a nutrient perspective?

NASA Astrophysics Data System (ADS)

Sullivan, B. W.; Nasto, M.; Alvarez-Clare, S.; Cole, R. J.; Reed, S.; Chazdon, R.; Davidson, E. A.; Cleveland, C. C.

2015-12-01

Extensive deforestation of tropical rainforest often leads to agricultural abandonment and secondary forest regeneration. The land area of secondary rainforest is soon likely to exceed that of primary forest, highlighting the importance of secondary tropical rainforest in the global carbon (C) cycle. Secondary forests often grow rapidly, but the role soil nutrients play in regulating secondary forest productivity remains unsettled. Consistent with biogeochemical theory, a landmark study from a set of sites in the Amazon Basin showed that secondary forests had low nitrogen (N) availability and relatively higher phosphorus (P) availability immediately after abandonment, but that as succession proceeded, N availability "recuperated" and there was relatively less P available. To address whether such changes in N and P availability during secondary forest growth are common, we reviewed 38 studies in lowland tropical rainforest that reported changes in 23 different metrics of N and P cycling during secondary succession. We calculated slopes (rates of change) during secondary succession for each metric in each study, and analyzed patterns in these rates of change. Significant trends during secondary succession were more evident in soils than in plants, but in most cases, the variability among studies was surprisingly low. Both soil N and P availability increased through succession, at least in surface soil. Such consistent changes imply substantial biogeochemical resilience of tropical forest soils in spite of differing land use histories and species compositions among studies. In most cases, slopes were similar whether primary forest was included in, or excluded from, our analysis, suggesting that secondary succession eventually leads to similar biogeochemical conditions as those found in primary forest. Our results suggesting consistent changes in N and P availability during succession provide a biogeochemical rationale for the conservation and restoration value of tropical secondary forests, and may be of utility to coupled C-nutrient models projecting primary productivity in a dynamic tropical biome.

People of the ancient rainforest: late Pleistocene foragers at the Batadomba-lena rockshelter, Sri Lanka.

PubMed

Perera, Nimal; Kourampas, Nikos; Simpson, Ian A; Deraniyagala, Siran U; Bulbeck, David; Kamminga, Johan; Perera, Jude; Fuller, Dorian Q; Szabó, Katherine; Oliveira, Nuno V

2011-09-01

Batadomba-lena, a rockshelter in the rainforest of southwestern Sri Lanka, has yielded some of the earliest evidence of Homo sapiens in South Asia. H. sapiens foragers were present at Batadomba-lena from ca. 36,000 cal BP to the terminal Pleistocene and Holocene. Human occupation was sporadic before the global Last Glacial Maximum (LGM). Batadomba-lena's Late Pleistocene inhabitants foraged for a broad spectrum of plant and mainly arboreal animal resources (monkeys, squirrels and abundant rainforest snails), derived from a landscape that retained equatorial rainforest cover through periods of pronounced regional aridity during the LGM. Juxtaposed hearths, palaeofloors with habitation debris, postholes, excavated pits, and animal and plant remains, including abundant Canarium nutshells, reflect intensive habitation of the rockshelter in times of monsoon intensification and biome reorganisation after ca. 16,000 cal BP. This period corresponds with further broadening of the economic spectrum, evidenced though increased contribution of squirrels, freshwater snails and Canarium nuts in the diet of the rockshelter occupants. Microliths are more abundant and morphologically diverse in the earliest, pre-LGM layer and decline markedly during intensified rockshelter use on the wane of the LGM. We propose that changing toolkits and subsistence base reflect changing foraging practices, from shorter-lived visits of highly mobile foraging bands in the period before the LGM, to intensified use of Batadomba-lena and intense foraging for diverse resources around the site during and, especially, following the LGM. Traces of ochre, marine shell beads and other objects from an 80 km-distant shore, and, possibly burials reflect symbolic practices from the outset of human presence at the rockshelter. Evidence for differentiated use of space (individual hearths, possible habitation structures) is present in LGM and terminal Pleistocene layers. The record of Batadomba-lena demonstrates that Late Pleistocene pathways to (aspects of) behavioural 'modernity' (composite tools, practice of symbolism and ritual, broad spectrum economy) were diverse and ecologically contingent. Copyright © 2011 Elsevier Ltd. All rights reserved.

Ticks and rickettsiae from wildlife in Belize, Central America.

PubMed

Lopes, Marcos G; May Junior, Joares; Foster, Rebecca J; Harmsen, Bart J; Sanchez, Emma; Martins, Thiago F; Quigley, Howard; Marcili, Arlei; Labruna, Marcelo B

2016-02-02

The agents of spotted fevers in Latin America are Rickettsia rickettsii, R. parkeri, Rickettsia sp. strain Atlantic rainforest, and R. massiliae. In Continental Central America, R. rickettsii remains the only known pathogenic tick-borne rickettsia. In the present study, ticks were collected from wild mammals in natural areas of Belize. Besides providing new data of ticks from Belize, we investigated rickettsial infection in some of these ticks. Our results provide ticks harboring rickettsial agents for the first time in Central America. Between 2010 and 2015, wild mammals were lived-trapped in the tropical broadleaf moist forests of central and southern Belize. Ticks were collected from the animals and identified to species by morphological and molecular analysis (DNA sequence of the tick mitochondrial 16S RNA gene). Some of the ticks were tested for rickettsial infection by molecular methods (DNA sequences of the rickettsial gltA and ompA genes). A total of 84 ticks were collected from 8 individual hosts, as follows: Amblyomma pacae from 3 Cuniculus paca; Amblyomma ovale and Amblyomma coelebs from a Nasua narica; A. ovale from an Eira Barbara; A. ovale, Amblyomma cf. oblongoguttatum, and Ixodes affinis from a Puma concolor; and A. ovale, A. coelebs, A. cf. oblongoguttatum, and I. affinis from two Panthera onca. Three rickettsial agents were detected: Rickettsia amblyommii in A. pacae, Rickettsia sp. strain Atlantic rainforest in A. ovale, and Rickettsia sp. endosymbiont in Ixodes affinis. The present study provides unprecedented records of ticks harboring rickettsial agents in the New World. An emerging rickettsial pathogen of South America, Rickettsia sp. strain Atlantic rainforest, is reported for the first time in Central America. Besides expanding the distribution of 3 rickettsial agents in Central America, our results highlight the possible occurrence of Rickettsia sp. strain Atlantic rainforest-caused spotted fever human cases in Belize, since its possible vector, A. ovale, is recognized as one of the most important human-biting ticks in the Neotropical region.

Interbasin groundwater flow and groundwater interaction with surface water in a lowland rainforest, Costa Rica: A review

NASA Astrophysics Data System (ADS)

Genereux, David P.; Jordan, Michael

2006-04-01

This paper reviews work related to interbasin groundwater flow (naturally occurring groundwater flow beneath watershed topographic divides) into lowland rainforest watersheds at La Selva Biological Station in Costa Rica. Chemical mixing calculations (based on dissolved chloride) have shown that up to half the water in some streams and up to 84% of the water in some riparian seeps and wells is due to high-solute interbasin groundwater flow (IGF). The contribution is even greater for major ions; IGF accounts for well over 90% of the major ions at these sites. Proportions are highly variable both among watersheds and with elevation within the same watershed (there is greater influence of IGF at lower elevations). The large proportion of IGF found in water in some riparian wetlands suggests that IGF is largely responsible for maintaining these wetlands. δ 18O data support the conclusions from the major ion data. Annual water and major ion budgets for two adjacent watersheds, one affected by IGF and the other not, showed that IGF accounted for two-thirds of the water input and 92-99% of the major ion input (depending on the major ion in question) to the former watershed. The large (in some cases, dominating) influence of IGF on watershed surface water quantity and quality has important implications for stream ecology and watershed management in this lowland rainforest. Because of its high phosphorus content, IGF increases a variety of ecological variables (algal growth rates, leaf decay rate, fungal biomass, invertebrate biomass, microbial respiration rates on leaves) in streams at La Selva. The significant rates of IGF at La Selva also suggest the importance of regional (as opposed to small-scale local) water resource planning that links lowland watersheds with regional groundwater. IGF is a relatively unexplored and potentially critical factor in the conservation of lowland rainforest.

Population genetic analysis of a medicinally significant Australian rainforest tree, Fontainea picrosperma C.T. White (Euphorbiaceae): biogeographic patterns and implications for species domestication and plantation establishment.

PubMed

Lamont, R W; Conroy, G C; Reddell, P; Ogbourne, S M

2016-02-29

Fontainea picrosperma, a subcanopy tree endemic to the rainforests of northeastern Australia, is of medicinal significance following the discovery of the novel anti-cancer natural product, EBC-46. Laboratory synthesis of EBC-46 is unlikely to be commercially feasible and consequently production of the molecule is via isolation from F. picrosperma grown in plantations. Successful domestication and plantation production requires an intimate knowledge of a taxon's life-history attributes and genetic architecture, not only to ensure the maximum capture of genetic diversity from wild source populations, but also to minimise the risk of a detrimental loss in genetic diversity via founder effects during subsequent breeding programs designed to enhance commercially significant agronomic traits. Here we report the use of eleven microsatellite loci (PIC = 0.429; P ID  = 1.72 × 10(-6)) to investigate the partitioning of genetic diversity within and among seven natural populations of F. picrosperma. Genetic variation among individuals and within populations was found to be relatively low (A = 2.831; H E  = 0.407), although there was marked differentiation among populations (PhiPT = 0.248). Bayesian, UPGMA and principal coordinates analyses detected three main genotypic clusters (K = 3), which were present at all seven populations. Despite low levels of historical gene flow (N m  = 1.382), inbreeding was negligible (F = -0.003); presumably due to the taxon's dioecious breeding system. The data suggests that F. picrosperma was previously more continuously distributed, but that rainforest contraction and expansion in response to glacial-interglacial cycles, together with significant anthropogenic effects have resulted in significant fragmentation. This research provides important tools to support plantation establishment, selection and genetic improvement of this medicinally significant Australian rainforest species.

N2O emissions in tropical rainforest and rubber plantation, the indicator from landuse changing in Xishuangbanna, Southwest China

NASA Astrophysics Data System (ADS)

Zhou, W. J.; Zhu, J.; Ji, H. L.; Zhang, Y.; Zhang, J.; Zheng, X.

2016-12-01

To understand the effects of landuse on N2O emissions and local climate change in the tropics, we measured N2O fluxes from a primary tropical rainforest (TRF, with treatments of litter removal and control) and a fertilized rubber plantation (RP, with treatments of fertilization (75 kg N ha-1 yr-1) and unfertilization) at Xishuangbanna, southwest China since 2012. The results have shown: 1) Fertilized RP N2O emission is bimodel, one peak after dry season fertilizer, another after rainy season fertilizer. Otherwise, the unfertilized RP and TRF have the similar seasonal dynamic with one peak in the middle of rainy season. 2) due to the fertilizer influence, the poaitive correlation between soil temperature/soil moisture and N2O was more significantly in unfertilized RP than fertilized RP respectively litter input changed the dominated controller of N2O emission in TRF: litter carbon input and soil DOC content for control treatment and, soil temperature and soil NO3- -N for litter removal treatment. 3) lab incubation indicated denitrification and nitrification as the main source for N2O emission in TRF and RP, respectively. 4) The N2O emissions from the fertilized and unfertilized plots in RP were 4.0 and 2.5 kg N ha-1 yr-1, respectively, from control and litter removal plots in TRF were 0.48 and 0.32 kg N ha-1 yr-1,respectively. 5) 100-year carbon dioxide equivalence of N2O from fertilized RP offsets 5.8% and 31.5% of carbon sink of the rubber plantation and local TRF, respectively. Upscaling it to the whole Xishuangbanna, N2O emissions from fertilized RP offset 17.1% of the tropical rainforest's carbon sink. When tropical rainforests are converted to fertilized rubber plantations, the N2O emission seasonal dynamic and mechanisms changed, the global warming effect is enhanced.

Seasonal dynamics in photosynthesis of woody plants at the northern limit of Asian tropics: potential role of fog in maintaining tropical rainforests and agriculture in Southwest China.

PubMed

Zhang, Yong-Jiang; Holbrook, N Michele; Cao, Kun-Fang

2014-10-01

The lowland tropical rainforests in Xishuangbanna, Southwest (SW) China, mark the northern limit of Asian tropics. Fog has been hypothesized to play a role in maintaining rainforests and tropical crop production in this region, but the physiological mechanism has not been studied. The goals of this study were to characterize the seasonal dynamics in photosynthesis and to assess the potential for fog to mitigate chilling-induced photodamage for tropical trees and crops in Xishuangbanna. We measured seasonal dynamics in light-saturated net photosynthetic rate (Aa), stomatal conductance (gs), intercellular CO2 concentration, quantum yield of Photosystem II (Fv/Fm) and maximum P700 changes (Pm; indicates the amount of active PSI complex), as well as chilling resistance and fog (light/shading) effects on low temperature-induced decline in Fv/Fm and Pm for native tree and introduced lower latitude tree or woody shrub species grown in a tropical botanical garden. Despite significant decreases in Aa, gs, Pm and Fv/Fm, most species maintained considerably high Aa during the cool season (2.51-14.6 μmol m(-2) s(-1)). Shaded leaves exposed to seasonal low temperatures had higher Fv/Fm than sun-exposed leaves in the cool season. All species could tolerate 1.4 °C in the dark, whereas a combined treatment of low temperature and high light caused a distinctly faster decline in Pm and Fv/Fm compared with low temperature treatment alone. Because fog persistence avoids or shortens the duration of high light condition in the morning when the temperatures are still low, our results provide support for the hypothesis that fog reduces chilling damage to tropical plants in this region and thus plays a role in maintaining tropical rainforests and agriculture in SW China. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

N2O emissions in tropical rainforest and rubber plantation, the indicator from landuse changing in Xishuangbanna, Southwest China

NASA Astrophysics Data System (ADS)

Zhou, Wenjun; Zhu, Jing; Ji, Hong-li; Zhang, Yi-Ping; Sha, Li-Qing; Gao, Jin-Bo; Zhang, Jun-Hui; Zheng, Xunhua

2017-04-01

To understand the effects of landuse on N2O emissions and local climate change in the tropics, we measured N2O fluxes from a primary tropical rainforest (TRF, with treatments of litter removal and control) and a fertilized rubber plantation (RP, with treatments of fertilization (75 kg N ha-1 yr-1) and unfertilization) at Xishuangbanna, southwest China since 2012. The results have shown: 1) Fertilized RP N2O emission is bimodel, one peak after dry season fertilizer, another after rainy season fertilizer. Otherwise, the unfertilized RP and TRF have the similar seasonal dynamic with one peak in the middle of rainy season. 2) due to the fertilizer influence, the poaitive correlation between soil temperature/soil moisture and N2O was more significantly in unfertilized RP than fertilized RP respectively litter input changed the dominated controller of N2O emission in TRF: litter carbon input and soil DOC content for control treatment and, soil temperature and soil NO3- -N for litter removal treatment. 3) lab incubation indicated denitrification and nitrification as the main source for N2O emission in TRF and RP, respectively. 4) The N2O emissions from the fertilized and unfertilized plots in RP were 4.0 and 2.5 kg N ha-1 yr-1, respectively, from control and litter removal plots in TRF were 0.48 and 0.32 kg N ha-1 yr-1,respectively. 5) 100-year carbon dioxide equivalence of N2O from fertilized RP offsets 5.8% and 31.5% of carbon sink of the rubber plantation and local TRF, respectively. Upscaling it to the whole Xishuangbanna, N2O emissions from fertilized RP offset 17.1% of the tropical rainforest's carbon sink. When tropical rainforests are converted to fertilized rubber plantations, the N2O emission seasonal dynamic and mechanisms changed, the global warming effect is enhanced.

Replicated throughfall exclusion experiment in an Indonesian perhumid rainforest: wood production, litter fall and fine root growth under simulated drought.

PubMed

Moser, Gerald; Schuldt, Bernhard; Hertel, Dietrich; Horna, Viviana; Coners, Heinz; Barus, Henry; Leuschner, Christoph

2014-05-01

Climate change scenarios predict increases in the frequency and duration of ENSO-related droughts for parts of South-East Asia until the end of this century exposing the remaining rainforests to increasing drought risk. A pan-tropical review of recorded drought-related tree mortalities in more than 100 monitoring plots before, during and after drought events suggested a higher drought-vulnerability of trees in South-East Asian than in Amazonian forests. Here, we present the results of a replicated (n = 3 plots) throughfall exclusion experiment in a perhumid tropical rainforest in Sulawesi, Indonesia. In this first large-scale roof experiment outside semihumid eastern Amazonia, 60% of the throughfall was displaced during the first 8 months and 80% during the subsequent 17 months, exposing the forest to severe soil desiccation for about 17 months. In the experiment's second year, wood production decreased on average by 40% with largely different responses of the tree families (ranging from -100 to +100% change). Most sensitive were trees with high radial growth rates under moist conditions. In contrast, tree height was only a secondary factor and wood specific gravity had no influence on growth sensitivity. Fine root biomass was reduced by 35% after 25 months of soil desiccation while fine root necromass increased by 250% indicating elevated fine root mortality. Cumulative aboveground litter production was not significantly reduced in this period. The trees from this Indonesian perhumid rainforest revealed similar responses of wood and litter production and root dynamics as those in two semihumid Amazonian forests subjected to experimental drought. We conclude that trees from paleo- or neotropical forests growing in semihumid or perhumid climates may not differ systematically in their growth sensitivity and vitality under sublethal drought stress. Drought vulnerability may depend more on stem cambial activity in moist periods than on tree height or wood specific gravity. © 2013 John Wiley & Sons Ltd.

Aerosol fluxes and dynamics within and above a tropical rainforest in South-East Asia

NASA Astrophysics Data System (ADS)

Whitehead, J. D.; Gallagher, M. W.; Dorsey, J. R.; Robinson, N.; Gabey, A. M.; Coe, H.; McFiggans, G.; Flynn, M. J.; Ryder, J.; Nemitz, E.; Davies, F.

2010-10-01

Atmospheric aerosol measurements were conducted near Danum Valley, in the Malaysian state of Sabah, North-East Borneo, as part of the OP3 and ACES projects, in April and June/July 2008. Here, aerosol fluxes and diurnal variability in and above the rainforest canopy were examined in order to gain an understanding of their behaviour in the surface layer of the South-East Asian rainforest. Aerosol fluxes were calculated by eddy covariance from measurements above the rainforest canopy on the Global Atmosphere Watch (GAW) tower. Upward fluxes were seen on most mornings between 09:00 and 11:00 local time and this could be attributed to venting of the nocturnal boundary layer as it broke up in the morning. Measurements were also conducted within the canopy and trunk space at a nearby site. Profiles in aerosol number concentrations were investigated using GRIMM Optical Particle Counters (OPCs) at various levels within the rainforest canopy and trunk space, as well as a single OPC on a vertically moving platform. These showed an overnight increase in larger particles (1-20 μm) at all levels, but much more prominently near the top of the canopy, which could be attributed to fog formation. At ground level, number concentrations in this size range correlated with enhancements in biological aerosol concentrations, measured using a Wide Issue Bioaerosol Spectrometer (WIBS) located near the forest floor, suggesting that coarse particle number concentrations were dominated by biological aerosols. A comparison of particle number concentrations (in the size range 0.5-1.0 μm) between above canopy and the trunk space showed correlations, despite turbulence data suggesting persistent decoupling between the two measurement sites. These correlations often relied on a shift of the particle time-series against each other, implying a time delay in observations between the sites, which varied according to time of day. This lag time was shortest during the middle of the day by a significant margin. This was not observed for aerosols larger than 1.0 μm. Further evidence of daytime coupling between above canopy and the trunk space in terms of aerosol measurements is implied by comparison of measurements from an Aerosol Mass Spectrometer (AMS) at the GAW tower and simultaneous bag sampling at the in-canopy site, subsequently analysed with the AMS. Transport of particles through the canopy seems to occur through large-scale, sporadic turbulent events, suggesting that the coupling between the canopy space and the air above is due to these ventilation events.

Effect of land-use changes on the abundance, distribution, and host-seeking behavior of Aedes arbovirus vectors in oil palm-dominated landscapes, southeastern Côte d’Ivoire

PubMed Central

Koudou, Benjamin G.; Müller, Pie; Malone, David; Tano, Yao; Utzinger, Jürg

2017-01-01

Background Identifying priority areas for vector control is of considerable public health relevance. Arthropod-borne viruses (arboviruses) spread by Aedes mosquitoes are (re)emerging in many parts of the tropics, partially explained by changes in agricultural land-use. We explored the effects of land-use changes on the abundance, distribution, and host-seeking behavior of Aedes mosquitoes along a gradient of anthropogenic disturbance in oil palm-dominated landscapes in southeastern Côte d’Ivoire. Methodology Between January and December 2014, eggs, larvae, pupae, and adults of Aedes mosquitoes were sampled in four types of macrohabitats (rainforest, polyculture, oil palm monoculture, and rural housing areas), using standard procedures (bamboo-ovitraps, metallic-ovitraps, larval surveys, and human-baited double-net traps). Immature stages were reared and adult mosquitoes identified at species level. Principal findings A total of 28,276 Aedes specimens belonging to 11 species were collected. No Aedes-positive microhabitat and only four specimens of Ae. aegypti were found in oil palm monoculture. The highest abundance of Aedes mosquitoes (60.9%) was found in polyculture, while the highest species richness (11 species) was observed in rainforest. Ae. aegypti was the predominant Aedes species, and exhibited high anthropophilic behavior inflicting 93.0% of total biting to humans. The biting rate of Aedes mosquitoes was 34.6 and 7.2-fold higher in polyculture and rural housing areas, respectively, compared to rainforest. Three species (Ae. aegypti, Ae. dendrophilus, and Ae. vittatus) bit humans in polyculture and rural housing areas, with respective biting rates of 21.48 and 4.48 females/person/day. Unexpectedly, all three species were also feeding during darkness. Aedes females showed bimodal daily feeding cycles with peaks at around 08:00 a.m. and 05:00 p.m. Host-seeking activities were interrupted between 11:00 a.m. and 02:00 p.m. in rural housing areas, while no such interruption was observed in polyculture. Some rainforest-dwelling Aedes species displayed little preference to feed on humans. Conclusions In southeastern Côte d’Ivoire, the agricultural land-use/land-cover changes due to the conversion of rainforest into oil palm monocultures influence the abundance, distribution, and host-seeking behaviors of anthropophagic and non-anthropophagic Aedes vectors. As a result, there is higher risk of humans to arbovirus transmission in polyculture and rural housing areas. There is a need for integrated vector management, including landscape epidemiology and ecotope-based vector control. PMID:29216248

Effect of land-use changes on the abundance, distribution, and host-seeking behavior of Aedes arbovirus vectors in oil palm-dominated landscapes, southeastern Côte d'Ivoire.

PubMed

Zahouli, Julien B Z; Koudou, Benjamin G; Müller, Pie; Malone, David; Tano, Yao; Utzinger, Jürg

2017-01-01

Identifying priority areas for vector control is of considerable public health relevance. Arthropod-borne viruses (arboviruses) spread by Aedes mosquitoes are (re)emerging in many parts of the tropics, partially explained by changes in agricultural land-use. We explored the effects of land-use changes on the abundance, distribution, and host-seeking behavior of Aedes mosquitoes along a gradient of anthropogenic disturbance in oil palm-dominated landscapes in southeastern Côte d'Ivoire. Between January and December 2014, eggs, larvae, pupae, and adults of Aedes mosquitoes were sampled in four types of macrohabitats (rainforest, polyculture, oil palm monoculture, and rural housing areas), using standard procedures (bamboo-ovitraps, metallic-ovitraps, larval surveys, and human-baited double-net traps). Immature stages were reared and adult mosquitoes identified at species level. A total of 28,276 Aedes specimens belonging to 11 species were collected. No Aedes-positive microhabitat and only four specimens of Ae. aegypti were found in oil palm monoculture. The highest abundance of Aedes mosquitoes (60.9%) was found in polyculture, while the highest species richness (11 species) was observed in rainforest. Ae. aegypti was the predominant Aedes species, and exhibited high anthropophilic behavior inflicting 93.0% of total biting to humans. The biting rate of Aedes mosquitoes was 34.6 and 7.2-fold higher in polyculture and rural housing areas, respectively, compared to rainforest. Three species (Ae. aegypti, Ae. dendrophilus, and Ae. vittatus) bit humans in polyculture and rural housing areas, with respective biting rates of 21.48 and 4.48 females/person/day. Unexpectedly, all three species were also feeding during darkness. Aedes females showed bimodal daily feeding cycles with peaks at around 08:00 a.m. and 05:00 p.m. Host-seeking activities were interrupted between 11:00 a.m. and 02:00 p.m. in rural housing areas, while no such interruption was observed in polyculture. Some rainforest-dwelling Aedes species displayed little preference to feed on humans. In southeastern Côte d'Ivoire, the agricultural land-use/land-cover changes due to the conversion of rainforest into oil palm monocultures influence the abundance, distribution, and host-seeking behaviors of anthropophagic and non-anthropophagic Aedes vectors. As a result, there is higher risk of humans to arbovirus transmission in polyculture and rural housing areas. There is a need for integrated vector management, including landscape epidemiology and ecotope-based vector control.

Provenance and geographic spread of St. Louis encephalitis virus.

PubMed

Kopp, Anne; Gillespie, Thomas R; Hobelsberger, Daniel; Estrada, Alejandro; Harper, James M; Miller, Richard A; Eckerle, Isabella; Müller, Marcel A; Podsiadlowski, Lars; Leendertz, Fabian H; Drosten, Christian; Junglen, Sandra

2013-06-11

St. Louis encephalitis virus (SLEV) is the prototypic mosquito-borne flavivirus in the Americas. Birds are its primary vertebrate hosts, but amplification in certain mammals has also been suggested. The place and time of SLEV emergence remain unknown. In an ecological investigation in a tropical rainforest in Palenque National Park, Mexico, we discovered an ancestral variant of SLEV in Culex nigripalpus mosquitoes. Those SLEV-Palenque strains form a highly distinct phylogenetic clade within the SLEV species. Cell culture studies of SLEV-Palenque versus epidemic SLEV (MSI-7) revealed no growth differences in insect cells but a clear inability of SLEV-Palenque to replicate in cells from birds, cotton rats, and free-tailed bats permissive for MSI-7 replication. Only cells from nonhuman primates and neotropical fruit bats were moderately permissive. Phylogeographic reconstruction identified the common ancestor of all epidemic SLEV strains to have existed in an area between southern Mexico and Panama ca. 330 years ago. Expansion of the epidemic lineage occurred in two waves, the first representing emergence near the area of origin and the second involving almost parallel appearances of the virus in the lower Mississippi and Amazon delta regions. Early diversification events overlapped human habitat invasion during the post-Columbian era. Several documented SLEV outbreaks, such as the 1964 Houston epidemic or the 1990 Tampa epidemic, were predated by the arrival of novel strains between 1 and 4 years before the outbreaks. Collectively, our data provide insight into the putative origins of SLEV, suggesting that virus emergence was driven by human invasion of primary rainforests. IMPORTANCE St. Louis encephalitis virus (SLEV) is the prototypic mosquito-transmitted flavivirus of the Americas. Unlike the West Nile virus, which we know was recently introduced into North America from the Old World, the provenience of SLEV is obscure. In an ecological investigation in a primary rainforest area of Palenque National Park, Mexico, we have discovered an ancestral variant of SLEV. The ancestral virus was much less active than the epidemic virus in cell cultures, reflecting its incomplete adaptation to hosts encountered outside primary rainforests. Knowledge of this virus enabled a spatiotemporal reconstruction of the common ancestor of all SLEVs and how the virus spread from there. We can infer that the cosmopolitan SLEV lineage emerged from Central America in the 17th century, a period of post-Columbian colonial history marked by intense human invasion of primary rainforests. Further spread followed major bird migration pathways over North and South America.

Taxonomic status and morphological variation of Hydrodynastes bicinctus (Hermann, 1804) (Serpentes: Dipsadidae).

PubMed

Murta-Fonseca, Roberta A; Franco, Francisco L; Fernandes, Daniel Silva

2016-08-26

Hydrodynastes bicinctus was described with no type material or locality and it has two subspecies currently recognized that are not taxonomically well defined. We tested the validity of the two subspecies through meristic, morphometric, and color pattern characters. Two apparently distinct color patterns of H. bicinctus were noticed, one from the Cerrado open formations and the other from the Amazon rainforest. These aforementioned patterns, however, exhibited a high degree of geographic overlap and many specimens showed a blended pattern. Based on these results we propose synonymizing H. bicinctus schultzi with the nominal taxon. Furthermore, we designate a neotype for the species, present data on geographic distribution, and provide morphological descriptions of the hemipenis, cephalic glands, and skull.

STS-65 Earth observation of Bahama Islands with dust pall, taken from OV-102

NASA Technical Reports Server (NTRS)

1994-01-01

During STS-65 a significant dust pall that originated in western Africa was recorded by a series of low oblique color photographs as it continued its westward trek across the Atlantic Ocean and then the Caribbean Sea and the Gulf of Mexico area. This particular view captures the northern edge of the dust, positioned just slightly north of the Bahama Islands. This major transport of African dust to the western hemisphere has been recorded periodically by other Shuttle astronauts and earlier Shuttle missions. Scientifically, there is evidence that some of this African dust even reaches the Amazon rainforest and serves as a source of airborne nutrients for rainforest vegetation. This photograph was taken aboard Columbia, Orbiter Vehicle (OV) 102.

Draft genome sequence of Bradyrhizobium manausense strain BR 3351T, an effective symbiont isolated from Amazon rainforest.

PubMed

Simões-Araújo, Jean Luiz; Rumjanek, Norma Gouvêa; Xavier, Gustavo Ribeiro; Zilli, Jerri Édson

The strain BR 3351 T (Bradyrhizobium manausense) was obtained from nodules of cowpea (Vigna unguiculata L. Walp) growing in soil collected from Amazon rainforest. Furthermore, it was observed that the strain has high capacity to fix nitrogen symbiotically in symbioses with cowpea. We report here the draft genome sequence of strain BR 3351 T . The information presented will be important for comparative analysis of nodulation and nitrogen fixation for diazotrophic bacteria. A draft genome with 9,145,311bp and 62.9% of GC content was assembled in 127 scaffolds using 100bp pair-end Illumina MiSeq system. The RAST annotation identified 8603 coding sequences, 51 RNAs genes, classified in 504 subsystems. Published by Elsevier Editora Ltda.

Restingomyces, a new sequestrate genus from the Brazilian Atlantic rainforest that is phylogenetically related to early-diverging taxa in Trappeaceae (Phallales).

PubMed

Sulzbacher, Marcelo A; Grebenc, Tine; Cabral, Tiara S; Giachini, Admir J; Goto, Bruno T; Smith, Matthew E; Baseia, Iuri G

2016-09-01

Restingomyces reticulatus gen. et sp. nov. is a recently discovered false truffle species from Atlantic "restinga" rainforest in northeastern Brazil. Molecular and morphological characters separate this new sequestrate species from other described taxa in the order Phallales (Phallomycetidae, Basidiomycota). In our phylogenetic analysis based on nuc 28S rDNA and atp6, R. reticulatus forms a sister clade to Trappea darkeri and Phallobata alba, with the three taxa forming the earliest diverging lineage within Phallales. Morphological and molecular data warrant the recognition of the new genus and species, described here, and we also amend the taxonomic description for the family Trappeaceae. © 2016 by The Mycological Society of America.

Genetic diversity of Burkholderia (Proteobacteria) species from the Caatinga and Atlantic rainforest biomes in Bahia, Brazil.

PubMed

Santini, A C; Santos, H R M; Gross, E; Corrêa, R X

2013-03-11

The genus Burkholderia (β-Proteobacteria) currently comprises more than 60 species, including parasites, symbionts and free-living organisms. Several new species of Burkholderia have recently been described showing a great diversity of phenotypes. We examined the diversity of Burkholderia spp in environmental samples collected from Caatinga and Atlantic rainforest biomes of Bahia, Brazil. Legume nodules were collected from five locations, and 16S rDNA and recA genes of the isolated microorganisms were analyzed. Thirty-three contigs of 16S rRNA genes and four contigs of the recA gene related to the genus Burkholderia were obtained. The genetic dissimilarity of the strains ranged from 0 to 2.5% based on 16S rDNA analysis, indicating two main branches: one distinct branch of the dendrogram for the B. cepacia complex and another branch that rendered three major groups, partially reflecting host plants and locations. A dendrogram designed with sequences of this research and those designed with sequences of Burkholderia-type strains and the first hit BLAST had similar topologies. A dendrogram similar to that constructed by analysis of 16S rDNA was obtained using sequences of the fragment of the recA gene. The 16S rDNA sequences enabled sufficient identification of relevant similarities and groupings amongst isolates and the sequences that we obtained. Only 6 of the 33 isolates analyzed via 16S rDNA sequencing showed high similarity with the B. cepacia complex. Thus, over 3/4 of the isolates have potential for biotechnological applications.

Spatially robust estimates of biological nitrogen (N) fixation imply substantial human alteration of the tropical N cycle

PubMed Central

Sullivan, Benjamin W.; Smith, W. Kolby; Townsend, Alan R.; Nasto, Megan K.; Reed, Sasha C.; Chazdon, Robin L.; Cleveland, Cory C.

2014-01-01

Biological nitrogen fixation (BNF) is the largest natural source of exogenous nitrogen (N) to unmanaged ecosystems and also the primary baseline against which anthropogenic changes to the N cycle are measured. Rates of BNF in tropical rainforest are thought to be among the highest on Earth, but they are notoriously difficult to quantify and are based on little empirical data. We adapted a sampling strategy from community ecology to generate spatial estimates of symbiotic and free-living BNF in secondary and primary forest sites that span a typical range of tropical forest legume abundance. Although total BNF was higher in secondary than primary forest, overall rates were roughly five times lower than previous estimates for the tropical forest biome. We found strong correlations between symbiotic BNF and legume abundance, but we also show that spatially free-living BNF often exceeds symbiotic inputs. Our results suggest that BNF in tropical forest has been overestimated, and our data are consistent with a recent top-down estimate of global BNF that implied but did not measure low tropical BNF rates. Finally, comparing tropical BNF within the historical area of tropical rainforest with current anthropogenic N inputs indicates that humans have already at least doubled reactive N inputs to the tropical forest biome, a far greater change than previously thought. Because N inputs are increasing faster in the tropics than anywhere on Earth, both the proportion and the effects of human N enrichment are likely to grow in the future. PMID:24843146

Conservation in Brazil's Chocolate Forest: The Unlikely Persistence of the Traditional Cocoa Agroecosystem.

PubMed

JOHNS

1999-01-01

/ In southern Bahia, Brazil, the traditional cocoa agroecosystem with a dense shade canopy of native trees is now recognized as a secondary conservation route for highly endangered Atlantic Rainforest species. This "chocolate forest" of the densely shaded farms persists despite a massive 20-year Brazilian government modernization program in which shade was seen as a chief impediment to raising cocoa production. The objective of this study was to determine how this traditional agroecosystem endured. Although dense shade limits cocoa yield, it provides several agroecological benefits: control of insect pests and weeds, microclimate stability, and soil fertility maintenance. A keycomponent of modernization efforts was a shade-tree removal program designed to maximize cocoa production by using low shade and fertilizer while substituting agrochemicals for many beneficial roles of the overhead trees. This research found that many farmers rejected, or only partially accepted, the shade reduction process although it promised much higher cocoa yield and profit. Farmers employing a wide range of shading were interviewed, and it was found that decisions to remove or maintain the shade trees were linked to both agroecological and risk-minimization factors. Farmers' perceptions of the agroecological functions of the shade trees and individual willingness to entertain the economic risk associated with substituting agrochemicals for these were important. A less-profitable, but lower-risk approach of occasional fertilizer and agrochemical use with the traditional shade intact was a rational and widespread choice. Policies designed to maintain the traditional agroecosystem through the current economic crisis should heed the multiple functions of the overhead trees. KEY WORDS: Conservation; Brazil; Atlantic Rainforest; Cocoa; Agroecology; Risk; Agroforestry

Soup to Tree: The Phylogeny of Beetles Inferred by Mitochondrial Metagenomics of a Bornean Rainforest Sample

PubMed Central

Crampton-Platt, Alex; Timmermans, Martijn J.T.N.; Gimmel, Matthew L.; Kutty, Sujatha Narayanan; Cockerill, Timothy D.; Vun Khen, Chey; Vogler, Alfried P.

2015-01-01

In spite of the growth of molecular ecology, systematics and next-generation sequencing, the discovery and analysis of diversity is not currently integrated with building the tree-of-life. Tropical arthropod ecologists are well placed to accelerate this process if all specimens obtained through mass-trapping, many of which will be new species, could be incorporated routinely into phylogeny reconstruction. Here we test a shotgun sequencing approach, whereby mitochondrial genomes are assembled from complex ecological mixtures through mitochondrial metagenomics, and demonstrate how the approach overcomes many of the taxonomic impediments to the study of biodiversity. DNA from approximately 500 beetle specimens, originating from a single rainforest canopy fogging sample from Borneo, was pooled and shotgun sequenced, followed by de novo assembly of complete and partial mitogenomes for 175 species. The phylogenetic tree obtained from this local sample was highly similar to that from existing mitogenomes selected for global coverage of major lineages of Coleoptera. When all sequences were combined only minor topological changes were induced against this reference set, indicating an increasingly stable estimate of coleopteran phylogeny, while the ecological sample expanded the tip-level representation of several lineages. Robust trees generated from ecological samples now enable an evolutionary framework for ecology. Meanwhile, the inclusion of uncharacterized samples in the tree-of-life rapidly expands taxon and biogeographic representation of lineages without morphological identification. Mitogenomes from shotgun sequencing of unsorted environmental samples and their associated metadata, placed robustly into the phylogenetic tree, constitute novel DNA “superbarcodes” for testing hypotheses regarding global patterns of diversity. PMID:25957318

The Market Triumph of Ecotourism: An Economic Investigation of the Private and Social Benefits of Competing Land Uses in the Peruvian Amazon

PubMed Central

Kirkby, Christopher A.; Giudice-Granados, Renzo; Day, Brett; Turner, Kerry; Velarde-Andrade, Luz Marina; Dueñas-Dueñas, Agusto; Lara-Rivas, Juan Carlos; Yu, Douglas W.

2010-01-01

Annual revenue flow to developing countries for ecotourism (or nature-based tourism) could be as large as US$ 210×1012, providing an enormous financial incentive against habitat loss and exploitation. However, is ecotourism the most privately and/or socially valuable use of rainforest land? The question is rarely answered because the relevant data, estimates of profits and fixed costs, are rarely available. We present a social cost-benefit analysis of land use in an ecotourism cluster in the Tambopata region of Amazonian Peru. The net present value of ecotourism-controlled land is given by the producer surplus (profits plus fixed costs of ecotourism lodges): US$ 1,158 ha−1, which is higher than all currently practiced alternatives, including unsustainable logging, ranching, and agriculture. To our knowledge, this is the first sector-wide study of profitability and producer surplus in a developing-country ecotourism sector and the first to compare against equivalent measures for a spectrum of alternative uses. We also find that ecotourism-controlled land sequesters between 5.3 to 8.7 million tons of above-ground carbon, which is equivalent to between 3000–5000 years of carbon emissions from the domestic component of air and surface travel between the gateway city of Cusco and the lodges, at 2005 emission rates. Ecotourism in Tambopata has successfully monetized the hedonic value of wild nature in Amazonian Peru, and justifies the maintenance of intact rainforest over all alternative uses on narrow economic grounds alone. PMID:20927377

Anthropogenic disturbances jeopardize biodiversity conservation within tropical rainforest reserves.

PubMed

Martínez-Ramos, Miguel; Ortiz-Rodríguez, Iván A; Piñero, Daniel; Dirzo, Rodolfo; Sarukhán, José

2016-05-10

Anthropogenic disturbances affecting tropical forest reserves have been documented, but their ecological long-term cumulative effects are poorly understood. Habitat fragmentation and defaunation are two major anthropogenic threats to the integrity of tropical reserves. Based on a long-term (four decades) study, we document how these disturbances synergistically disrupt ecological processes and imperil biodiversity conservation and ecosystem functioning at Los Tuxtlas, the northernmost tropical rainforest reserve in the Americas. Deforestation around this reserve has reduced the reserve to a medium-sized fragment (640 ha), leading to an increased frequency of canopy-gap formation. In addition, hunting and habitat loss have caused the decline or local extinction of medium and large herbivores. Combining empirical, experimental, and modeling approaches, we support the hypothesis that such disturbances produced a demographic explosion of the long-lived (≈120 y old, maximum height of 7 m) understory palm Astrocaryum mexicanum, whose population has increased from 1,243-4,058 adult individuals per hectare in only 39 y (annual growth rate of ca 3%). Faster gap formation increased understory light availability, enhancing seed production and the growth of immature palms, whereas release from mammalian herbivory and trampling increased survival of seedlings and juveniles. In turn, the palm's demographic explosion was followed by a reduction of tree species diversity, changing forest composition, altering the relative contribution of trees to forest biomass, and disrupting litterfall dynamics. We highlight how indirect anthropogenic disturbances (e.g., palm proliferation) on otherwise protected areas threaten tropical conservation, a phenomenon that is currently eroding the planet's richest repositories of biodiversity.

Anthropogenic disturbances jeopardize biodiversity conservation within tropical rainforest reserves

PubMed Central

Martínez-Ramos, Miguel; Ortiz-Rodríguez, Iván A.; Piñero, Daniel; Dirzo, Rodolfo; Sarukhán, José

2016-01-01

Anthropogenic disturbances affecting tropical forest reserves have been documented, but their ecological long-term cumulative effects are poorly understood. Habitat fragmentation and defaunation are two major anthropogenic threats to the integrity of tropical reserves. Based on a long-term (four decades) study, we document how these disturbances synergistically disrupt ecological processes and imperil biodiversity conservation and ecosystem functioning at Los Tuxtlas, the northernmost tropical rainforest reserve in the Americas. Deforestation around this reserve has reduced the reserve to a medium-sized fragment (640 ha), leading to an increased frequency of canopy-gap formation. In addition, hunting and habitat loss have caused the decline or local extinction of medium and large herbivores. Combining empirical, experimental, and modeling approaches, we support the hypothesis that such disturbances produced a demographic explosion of the long-lived (≈120 y old, maximum height of 7 m) understory palm Astrocaryum mexicanum, whose population has increased from 1,243–4,058 adult individuals per hectare in only 39 y (annual growth rate of ca. 3%). Faster gap formation increased understory light availability, enhancing seed production and the growth of immature palms, whereas release from mammalian herbivory and trampling increased survival of seedlings and juveniles. In turn, the palm’s demographic explosion was followed by a reduction of tree species diversity, changing forest composition, altering the relative contribution of trees to forest biomass, and disrupting litterfall dynamics. We highlight how indirect anthropogenic disturbances (e.g., palm proliferation) on otherwise protected areas threaten tropical conservation, a phenomenon that is currently eroding the planet’s richest repositories of biodiversity. PMID:27071122

The market triumph of ecotourism: an economic investigation of the private and social benefits of competing land uses in the Peruvian Amazon.

PubMed

Kirkby, Christopher A; Giudice-Granados, Renzo; Day, Brett; Turner, Kerry; Velarde-Andrade, Luz Marina; Dueñas-Dueñas, Agusto; Lara-Rivas, Juan Carlos; Yu, Douglas W

2010-09-29

Annual revenue flow to developing countries for ecotourism (or nature-based tourism) could be as large as US$ 210×10(12), providing an enormous financial incentive against habitat loss and exploitation. However, is ecotourism the most privately and/or socially valuable use of rainforest land? The question is rarely answered because the relevant data, estimates of profits and fixed costs, are rarely available. We present a social cost-benefit analysis of land use in an ecotourism cluster in the Tambopata region of Amazonian Peru. The net present value of ecotourism-controlled land is given by the producer surplus (profits plus fixed costs of ecotourism lodges): US$ 1,158 ha(-1), which is higher than all currently practiced alternatives, including unsustainable logging, ranching, and agriculture. To our knowledge, this is the first sector-wide study of profitability and producer surplus in a developing-country ecotourism sector and the first to compare against equivalent measures for a spectrum of alternative uses. We also find that ecotourism-controlled land sequesters between 5.3 to 8.7 million tons of above-ground carbon, which is equivalent to between 3000-5000 years of carbon emissions from the domestic component of air and surface travel between the gateway city of Cusco and the lodges, at 2005 emission rates. Ecotourism in Tambopata has successfully monetized the hedonic value of wild nature in Amazonian Peru, and justifies the maintenance of intact rainforest over all alternative uses on narrow economic grounds alone.

Water quality in Atlantic rainforest mountain rivers (South America): quality indices assessment, nutrients distribution, and consumption effect.

PubMed

Avigliano, Esteban; Schenone, Nahuel

2016-08-01

The South American Atlantic rainforest is a one-of-a-kind ecosystem considered as a biodiversity hotspot; however, in the last decades, it was intensively reduced to 7 % of its original surface. Water resources and water quality are one of the main goods and services this system provides to people. For monitoring and management recommendations, the present study is focused on (1) determining the nutrient content (nitrate, nitrite, ammonium, and phosphate) and physiochemical parameters (temperature, pH, electrical conductivity, turbidity, dissolved oxygen, and total dissolved solids) in surface water from 24 rainforest mountain rivers in Argentina, (2) analyzing the human health risk, (3) assessing the environmental distribution of the determined pollutants, and (4) analyzing water quality indices (WQIobj and WQImin). In addition, for total coliform bacteria, a dataset was used from literature. Turbidity, total dissolved solids, and nitrite (NO2 (-)) exceeded the guideline value recommended by national or international guidelines in several sampling stations. The spatial distribution pattern was analyzed by Principal Component Analysis and Factor Analysis (PCA/FA) showing well-defined groups of rivers. Both WQI showed good adjustment (R (2) = 0.89) and rated water quality as good or excellent in all sampling sites (WQI > 71). Therefore, this study suggests the use of the WQImin for monitoring water quality in the region and also the water treatment of coliform, total dissolved solids, and turbidity.

Effectiveness of rodent control and monitoring techniques for a montane rainforest

USGS Publications Warehouse

Nelson, Jay T.; Woodworth, Bethany L.; Fancy, Steven G.; Lindsey, Gerald D.; Tweed, Eric J.

2002-01-01

Introduced black (Rattus rattus) and Polynesian (R. exulans) rats are damaging to native birds, insects, and plants in island ecosystems. We controlled rodent populations in a montane rainforest on the island of Hawaii to determine feasibility, cost, and effectiveness of ground-based rodent control in a rugged, remote rainforest habitat. Treatment was conducted 1996-99, from January to April each year, using rodenticide bait stations and snap-traps. We monitored rodent numbers in 48-ha treatment and reference areas before, during, and after control. As indexed by presence of rat sign in tracking tunnels or census blocks, rodent control reduced rodent abundance 58-90% each year 1 month after treatment began. There was an influx of rats into the treatment area, as shown by higher than expected numbers of rats snap-trapped on the treatment perimeter. Rodent numbers recovered to approximate pretreatment levels by the beginning of the following treatment year. Coast of equipment and supplies for rodent control for the first year was about \\$7,000 for a 1-km2 grid. After the first year, cost decreased to about \\$2,000 for 1 km2 per year. Rodent control applied continuously for 4 months each year during the breeding season may be effective in protecting nesting forest birds, but will not provide protection to plants and invertebrates vulnerable to predation throughout the year, and it is not likely to protect avian food resources.

The Role of Stream Water Carbon Dynamics and Export in the Carbon Balance of a Tropical Seasonal Rainforest, Southwest China

PubMed Central

Zhou, Wen-Jun; Zhang, Yi-Ping; Schaefer, Douglas A.; Sha, Li-Qing; Deng, Yun; Deng, Xiao-Bao; Dai, Kai-Jie

2013-01-01

A two-year study (2009 ∼ 2010) was carried out to investigate the dynamics of different carbon (C) forms, and the role of stream export in the C balance of a 23.4-ha headwater catchment in a tropical seasonal rainforest at Xishuangbanna (XSBN), southwest China. The seasonal volumetric weighted mean (VWM) concentrations of total inorganic C (TIC) and dissolved inorganic C (DIC) were higher, and particulate inorganic C (PIC) and organic C (POC) were lower, in the dry season than the rainy season, while the VWM concentrations of total organic C (TOC) and dissolved organic C (DOC) were similar between seasons. With increased monthly stream discharge and stream water temperature (SWT), only TIC and DIC concentrations decreased significantly. The most important C form in stream export was DIC, accounting for 51.8% of the total C (TC) export; DOC, POC, and PIC accounted for 21.8%, 14.9%, and 11.5% of the TC export, respectively. Dynamics of C flux were closely related to stream discharge, with the greatest export during the rainy season. C export in the headwater stream was 47.1 kg C ha−1 yr−1, about 2.85% of the annual net ecosystem exchange. This finding indicates that stream export represented a minor contribution to the C balance in this tropical seasonal rainforest. PMID:23437195

The role of stream water carbon dynamics and export in the carbon balance of a tropical seasonal rainforest, southwest China.

PubMed

Zhou, Wen-Jun; Zhang, Yi-Ping; Schaefer, Douglas A; Sha, Li-Qing; Deng, Yun; Deng, Xiao-Bao; Dai, Kai-Jie

2013-01-01

A two-year study (2009 ~ 2010) was carried out to investigate the dynamics of different carbon (C) forms, and the role of stream export in the C balance of a 23.4-ha headwater catchment in a tropical seasonal rainforest at Xishuangbanna (XSBN), southwest China. The seasonal volumetric weighted mean (VWM) concentrations of total inorganic C (TIC) and dissolved inorganic C (DIC) were higher, and particulate inorganic C (PIC) and organic C (POC) were lower, in the dry season than the rainy season, while the VWM concentrations of total organic C (TOC) and dissolved organic C (DOC) were similar between seasons. With increased monthly stream discharge and stream water temperature (SWT), only TIC and DIC concentrations decreased significantly. The most important C form in stream export was DIC, accounting for 51.8% of the total C (TC) export; DOC, POC, and PIC accounted for 21.8%, 14.9%, and 11.5% of the TC export, respectively. Dynamics of C flux were closely related to stream discharge, with the greatest export during the rainy season. C export in the headwater stream was 47.1 kg C ha(-1) yr(-1), about 2.85% of the annual net ecosystem exchange. This finding indicates that stream export represented a minor contribution to the C balance in this tropical seasonal rainforest.

Dry habitats were crucibles of domestication in the evolution of agriculture in ants

PubMed Central

2017-01-01

The evolution of ant agriculture, as practised by the fungus-farming ‘attine’ ants, is thought to have arisen in the wet rainforests of South America about 55–65 Ma. Most subsequent attine agricultural evolution, including the domestication event that produced the ancestor of higher attine cultivars, is likewise hypothesized to have occurred in South American rainforests. The ‘out-of-the-rainforest’ hypothesis, while generally accepted, has never been tested in a phylogenetic context. It also presents a problem for explaining how fungal domestication might have occurred, given that isolation from free-living populations is required. Here, we use phylogenomic data from ultra-conserved element (UCE) loci to reconstruct the evolutionary history of fungus-farming ants, reduce topological uncertainty, and identify the closest non-fungus-growing ant relative. Using the phylogeny we infer the history of attine agricultural systems, habitat preference and biogeography. Our results show that the out-of-the-rainforest hypothesis is correct with regard to the origin of attine ant agriculture; however, contrary to expectation, we find that the transition from lower to higher agriculture is very likely to have occurred in a seasonally dry habitat, inhospitable to the growth of free-living populations of attine fungal cultivars. We suggest that dry habitats favoured the isolation of attine cultivars over the evolutionary time spans necessary for domestication to occur. PMID:28404776

Linking the Composition of Bacterial and Archaeal Communities to Characteristics of Soil and Flora Composition in the Atlantic Rainforest

PubMed Central

Lima-Perim, Julia Elidia; Romagnoli, Emiliana Manesco; Dini-Andreote, Francisco; Durrer, Ademir; Dias, Armando Cavalcante Franco; Andreote, Fernando Dini

2016-01-01

The description of microbiomes as intrinsic fractions of any given ecosystem is an important issue, for instance, by linking their compositions and functions with other biotic and abiotic components of natural systems and hosts. Here we describe the archaeal and bacterial communities from soils of the Atlantic Rainforest in Brazil. Based on the comparison of three areas located along an altitudinal gradient—namely, Santa Virginia, Picinguaba and Restinga—we detected the most abundant groups of Bacteria (Acidobacteria and Proteobacteria) and Archaea (Thaumarchaeota, Crenarchaeota and Euryarchaeota). The particular composition of such communities in each of these areas was first evidenced by PCR-DGGE patterns [determined for Bacteria, Archaea and ammonia-oxidizing organisms—ammonia-oxidizing archaea (AOA) and bacteria (AOB)]. Moreover, sequence-based analysis provided a better resolution of communities, which indicated distinct frequencies of archaeal phyla and bacterial OTUs across areas. We found, as indicated by the Mantel test and multivariate analyses, a potential effect of the flora composition that outpaces the effect of soil characteristics (either physical and chemical) influencing the assembly of these microbial communities in soils. Our results indicate a collective role of the ecosystem underlying observed differences in microbial communities in these soils. Particularly, we posit that rainforest preservation also needs to take into account the maintenance of the soil biodiversity, as this is prompted to influence major processes that affect ecosystem functioning. PMID:26752633

Beetle assemblages from an Australian tropical rainforest show that the canopy and the ground strata contribute equally to biodiversity

PubMed Central

Stork, Nigel E; Grimbacher, Peter S

2006-01-01

There remains great uncertainty about how much tropical forest canopies contribute to global species richness estimates and the relative specialization of insect species to vertical zones. To investigate these issues, we conducted a four-year sampling program in lowland tropical rainforest in North Queensland, Australia. Beetles were sampled using a trap that combines Malaise and flight interception trap (FIT) functions. Pairs of this trap, one on the ground and a second suspended 15–20 m above in the canopy were located at five sites, spaced 50 m or more apart. These traps produced 29 986 beetles of 1473 species and 77 families. There were similar numbers of individuals (canopy 14 473; ground 15 513) and species (canopy 1158; ground 895) in each stratum, but significantly more rare species in the canopy (canopy 509; ground 283). Seventy two percent of the species (excluding rare species) were found in both strata. Using IndVal, we found 24 and 27% of the abundant species (n≥20 individuals) to be specialized to the canopy and the ground strata, respectively, and equivalent analyses at the family level showed figures of 30 and 22%, respectively. These results show that the canopy and the ground strata both provide important contributions to rainforest biodiversity. PMID:16822759

Bacterial selection by mycospheres of Atlantic Rainforest mushrooms.

PubMed

Halsey, Joshua Andrew; de Cássia Pereira E Silva, Michele; Andreote, Fernando Dini

2016-10-01

This study focuses on the selection exerted on bacterial communities in the mycospheres of mushrooms collected in the Brazilian Atlantic Rainforest. A total of 24 paired samples (bulk soil vs. mycosphere) were assessed to investigate potential interactions between fungi and bacteria present in fungal mycospheres. Prevalent fungal families were identified as Marasmiaceae and Lepiotaceae (both Basidiomycota) based on ITS partial sequencing. We used culture-independent techniques to analyze bacterial DNA from soil and mycosphere samples. Bacterial communities in the samples were distinguished based on overall bacterial, alphaproteobacterial, and betaproteobacterial PCR-DGGE patterns, which were different in fungi belonging to different taxa. These results were confirmed by pyrosequencing the V4 region of the 16S rRNA gene (based on five bulk soil vs. mycosphere pairs), which revealed the most responsive bacterial families in the different conditions generated beneath the mushrooms, identified as Bradyrhizobiaceae, Burkholderiaceae, and Pseudomonadaceae. The bacterial families Acetobacteraceae, Chrhoniobacteraceae, Planctomycetaceae, Conexibacteraceae, and Burkholderiaceae were found in all mycosphere samples, composing the core mycosphere microbiome. Similarly, some bacterial groups identified as Koribacteriaceae, Acidobacteria (Solibacteriaceae) and an unclassified group of Acidobacteria were preferentially present in the bulk soil samples (found in all of them). In this study we depict the mycosphere effect exerted by mushrooms inhabiting the Brazilian Atlantic Rainforest, and identify the bacteria with highest response to such a specific niche, possibly indicating the role bacteria play in mushroom development and dissemination within this yet-unexplored environment.

High variation in foliage and leaf litter chemistry among 45 tree species of a neotropical rainforest community.

PubMed

Hättenschwiler, Stephan; Aeschlimann, Beat; Coûteaux, Marie-Madeleine; Roy, Jacques; Bonal, Damien

2008-01-01

Distinct ecosystem level carbon : nitrogen : phosphorus (C : N : P) stoichiometries in forest foliage have been suggested to reflect ecosystem-scale selection for physiological strategies in plant nutrient use. Here, this hypothesis was explored in a nutrient-poor lowland rainforest in French Guiana. Variation in C, N and P concentrations was evaluated in leaf litter and foliage from neighbour trees of 45 different species, and the litter concentrations of major C fractions were also measured. Litter C ranged from 45.3 to 52.4%, litter N varied threefold (0.68-2.01%), and litter P varied seven-fold (0.009-0.062%) among species. Compared with foliage, mean litter N and P concentrations decreased by 30% and 65%, respectively. Accordingly, the range in mass-based N : P shifted from 14 to 55 in foliage to 26 to 105 in litter. Resorption proficiencies indicated maximum P withdrawal in most species, but with a substantial increase in variation in litter P compared with foliage. These data suggest that constrained ecosystem-level C : N : P ratios do not preclude the evolution of highly diversified strategies of nutrient use and conservation among tropical rainforest tree species. The resulting large variation in litter quality will influence stoichiometric constraints within the decomposer food web, with potentially far-ranging consequences on nutrient dynamics and plant-soil feedbacks.

Altitude affects the reproductive performance in monoicous and dioicous bryophytes: examples from a Brazilian Atlantic rainforest

PubMed Central

Maciel-Silva, Adaíses S.; Marques Valio, Ivany F.; Rydin, Håkan

2012-01-01

Background and aims Short life cycles and trade-offs linked to breeding systems make bryophytes good models for the study of plant reproductive strategies. Our aim was to test if differences in sexual reproductive performance of bryophytes in tropical rainforests are driven by the breeding system of the species (monoicous or dioicous) or are mainly affected by the habitat. Methodology The reproductive performance (sexual branches, gametangia (sex organs), fertilization and sporophyte production) of 11 species was repeatedly monitored and analysed from populations at sea-level and montane sites of a Brazilian Atlantic rainforest over 15 months. Principal results Monoicous species had the highest reproductive performance, particularly for sexual branches, fertilized gametangia and sporophyte production. Species at the sea-level site produced more sexual branches and had more female-biased sex ratios of gametangia than species in the montane site. Fertilizations were more frequent at the montane site, but sporophyte frequency was similar between the two sites. Fertilization tended to occur mostly in the periods of heavy rain (October to December). Conclusions Breeding system is not the only major influence on the reproductive performance of bryophytes. We show that habitat is also an important factor determining life-history differentiation. Female-biased sex ratios and low rates of fertilization are seen to be compensated for by high production of reproductive structures at the initial phases of the reproductive cycle. PMID:22822422

Green Leaf Volatile Emissions during High Temperature and Drought Stress in a Central Amazon Rainforest

PubMed Central

Jardine, Kolby J.; Chambers, Jeffrey Q.; Holm, Jennifer; Jardine, Angela B.; Fontes, Clarissa G.; Zorzanelli, Raquel F.; Meyers, Kimberly T.; de Souza, Vinicius Fernadez; Garcia, Sabrina; Gimenez, Bruno O.; de O. Piva, Luani R.; Higuchi, Niro; Artaxo, Paulo; Martin, Scot; Manzi, Antônio O.

2015-01-01

Prolonged drought stress combined with high leaf temperatures can induce programmed leaf senescence involving lipid peroxidation, and the loss of net carbon assimilation during early stages of tree mortality. Periodic droughts are known to induce widespread tree mortality in the Amazon rainforest, but little is known about the role of lipid peroxidation during drought-induced leaf senescence. In this study, we present observations of green leaf volatile (GLV) emissions during membrane peroxidation processes associated with the combined effects of high leaf temperatures and drought-induced leaf senescence from individual detached leaves and a rainforest ecosystem in the central Amazon. Temperature-dependent leaf emissions of volatile terpenoids were observed during the morning, and together with transpiration and net photosynthesis, showed a post-midday depression. This post-midday depression was associated with a stimulation of C5 and C6 GLV emissions, which continued to increase throughout the late afternoon in a temperature-independent fashion. During the 2010 drought in the Amazon Basin, which resulted in widespread tree mortality, green leaf volatile emissions (C6 GLVs) were observed to build up within the forest canopy atmosphere, likely associated with high leaf temperatures and enhanced drought-induced leaf senescence processes. The results suggest that observations of GLVs in the tropical boundary layer could be used as a chemical sensor of reduced ecosystem productivity associated with drought stress. PMID:27135346

Response of free-living nitrogen-fixing microorganisms to land use change in the Amazon rainforest.

PubMed

Mirza, Babur S; Potisap, Chotima; Nüsslein, Klaus; Bohannan, Brendan J M; Rodrigues, Jorge L M

2014-01-01

The Amazon rainforest, the largest equatorial forest in the world, is being cleared for pasture and agricultural use at alarming rates. Tropical deforestation is known to cause alterations in microbial communities at taxonomic and phylogenetic levels, but it is unclear whether microbial functional groups are altered. We asked whether free-living nitrogen-fixing microorganisms (diazotrophs) respond to deforestation in the Amazon rainforest, using analysis of the marker gene nifH. Clone libraries were generated from soil samples collected from a primary forest, a 5-year-old pasture originally converted from primary forest, and a secondary forest established after pasture abandonment. Although diazotroph richness did not significantly change among the three plots, diazotroph community composition was altered with forest-to-pasture conversion, and phylogenetic similarity was higher among pasture communities than among those in forests. There was also 10-fold increase in nifH gene abundance following conversion from primary forest to pasture. Three environmental factors were associated with the observed changes: soil acidity, total N concentration, and C/N ratio. Our results suggest a partial restoration to initial levels of abundance and community structure of diazotrophs following pasture abandonment, with primary and secondary forests sharing similar communities. We postulate that the response of diazotrophs to land use change is a direct consequence of changes in plant communities, particularly the higher N demand of pasture plant communities for supporting aboveground plant growth.

Green Leaf Volatile Emissions during High Temperature and Drought Stress in a Central Amazon Rainforest.

PubMed

Jardine, Kolby J; Chambers, Jeffrey Q; Holm, Jennifer; Jardine, Angela B; Fontes, Clarissa G; Zorzanelli, Raquel F; Meyers, Kimberly T; de Souza, Vinicius Fernadez; Garcia, Sabrina; Gimenez, Bruno O; Piva, Luani R de O; Higuchi, Niro; Artaxo, Paulo; Martin, Scot; Manzi, Antônio O

2015-09-15

Prolonged drought stress combined with high leaf temperatures can induce programmed leaf senescence involving lipid peroxidation, and the loss of net carbon assimilation during early stages of tree mortality. Periodic droughts are known to induce widespread tree mortality in the Amazon rainforest, but little is known about the role of lipid peroxidation during drought-induced leaf senescence. In this study, we present observations of green leaf volatile (GLV) emissions during membrane peroxidation processes associated with the combined effects of high leaf temperatures and drought-induced leaf senescence from individual detached leaves and a rainforest ecosystem in the central Amazon. Temperature-dependent leaf emissions of volatile terpenoids were observed during the morning, and together with transpiration and net photosynthesis, showed a post-midday depression. This post-midday depression was associated with a stimulation of C₅ and C₆ GLV emissions, which continued to increase throughout the late afternoon in a temperature-independent fashion. During the 2010 drought in the Amazon Basin, which resulted in widespread tree mortality, green leaf volatile emissions (C₆ GLVs) were observed to build up within the forest canopy atmosphere, likely associated with high leaf temperatures and enhanced drought-induced leaf senescence processes. The results suggest that observations of GLVs in the tropical boundary layer could be used as a chemical sensor of reduced ecosystem productivity associated with drought stress.

Going coastal: shared evolutionary history between coastal British Columbia and Southeast Alaska wolves (Canis lupus).

PubMed

Weckworth, Byron V; Dawson, Natalie G; Talbot, Sandra L; Flamme, Melanie J; Cook, Joseph A

2011-05-04

Many coastal species occupying the temperate rainforests of the Pacific Northwest in North America comprise endemic populations genetically and ecologically distinct from interior continental conspecifics. Morphological variation previously identified among wolf populations resulted in recognition of multiple subspecies of wolves in the Pacific Northwest. Recently, separate genetic studies have identified diverged populations of wolves in coastal British Columbia and coastal Southeast Alaska, providing support for hypotheses of distinct coastal subspecies. These two regions are geographically and ecologically contiguous, however, there is no comprehensive analysis across all wolf populations in this coastal rainforest. By combining mitochondrial DNA datasets from throughout the Pacific Northwest, we examined the genetic relationship between coastal British Columbia and Southeast Alaska wolf populations and compared them with adjacent continental populations. Phylogenetic analysis indicates complete overlap in the genetic diversity of coastal British Columbia and Southeast Alaska wolves, but these populations are distinct from interior continental wolves. Analyses of molecular variation support the separation of all coastal wolves in a group divergent from continental populations, as predicted based on hypothesized subspecies designations. Two novel haplotypes also were uncovered in a newly assayed continental population of interior Alaska wolves. We found evidence that coastal wolves endemic to these temperate rainforests are diverged from neighbouring, interior continental wolves; a finding that necessitates new international strategies associated with the management of this species.

Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rainforest land snail Gnarosophia bellendenkerensis (Brazier 1875).

PubMed

Hugall, Andrew; Moritz, Craig; Moussalli, Adnan; Stanisic, John

2002-04-30

Comparative phylogeography has proved useful for investigating biological responses to past climate change and is strongest when combined with extrinsic hypotheses derived from the fossil record or geology. However, the rarity of species with sufficient, spatially explicit fossil evidence restricts the application of this method. Here, we develop an alternative approach in which spatial models of predicted species distributions under serial paleoclimates are compared with a molecular phylogeography, in this case for a snail endemic to the rainforests of North Queensland, Australia. We also compare the phylogeography of the snail to those from several endemic vertebrates and use consilience across all of these approaches to enhance biogeographical inference for this rainforest fauna. The snail mtDNA phylogeography is consistent with predictions from paleoclimate modeling in relation to the location and size of climatic refugia through the late Pleistocene-Holocene and broad patterns of extinction and recolonization. There is general agreement between quantitative estimates of population expansion from sequence data (using likelihood and coalescent methods) vs. distributional modeling. The snail phylogeography represents a composite of both common and idiosyncratic patterns seen among vertebrates, reflecting the geographically finer scale of persistence and subdivision in the snail. In general, this multifaceted approach, combining spatially explicit paleoclimatological models and comparative phylogeography, provides a powerful approach to locating historical refugia and understanding species' responses to them.

Linking the Composition of Bacterial and Archaeal Communities to Characteristics of Soil and Flora Composition in the Atlantic Rainforest.

PubMed

Lima-Perim, Julia Elidia; Romagnoli, Emiliana Manesco; Dini-Andreote, Francisco; Durrer, Ademir; Dias, Armando Cavalcante Franco; Andreote, Fernando Dini

2016-01-01

The description of microbiomes as intrinsic fractions of any given ecosystem is an important issue, for instance, by linking their compositions and functions with other biotic and abiotic components of natural systems and hosts. Here we describe the archaeal and bacterial communities from soils of the Atlantic Rainforest in Brazil. Based on the comparison of three areas located along an altitudinal gradient-namely, Santa Virginia, Picinguaba and Restinga-we detected the most abundant groups of Bacteria (Acidobacteria and Proteobacteria) and Archaea (Thaumarchaeota, Crenarchaeota and Euryarchaeota). The particular composition of such communities in each of these areas was first evidenced by PCR-DGGE patterns [determined for Bacteria, Archaea and ammonia-oxidizing organisms-ammonia-oxidizing archaea (AOA) and bacteria (AOB)]. Moreover, sequence-based analysis provided a better resolution of communities, which indicated distinct frequencies of archaeal phyla and bacterial OTUs across areas. We found, as indicated by the Mantel test and multivariate analyses, a potential effect of the flora composition that outpaces the effect of soil characteristics (either physical and chemical) influencing the assembly of these microbial communities in soils. Our results indicate a collective role of the ecosystem underlying observed differences in microbial communities in these soils. Particularly, we posit that rainforest preservation also needs to take into account the maintenance of the soil biodiversity, as this is prompted to influence major processes that affect ecosystem functioning.

Reconciling paleodistribution models and comparative phylogeography in the Wet Tropics rainforest land snail Gnarosophia bellendenkerensis (Brazier 1875)

PubMed Central

Hugall, Andrew; Moritz, Craig; Moussalli, Adnan; Stanisic, John

2002-01-01

Comparative phylogeography has proved useful for investigating biological responses to past climate change and is strongest when combined with extrinsic hypotheses derived from the fossil record or geology. However, the rarity of species with sufficient, spatially explicit fossil evidence restricts the application of this method. Here, we develop an alternative approach in which spatial models of predicted species distributions under serial paleoclimates are compared with a molecular phylogeography, in this case for a snail endemic to the rainforests of North Queensland, Australia. We also compare the phylogeography of the snail to those from several endemic vertebrates and use consilience across all of these approaches to enhance biogeographical inference for this rainforest fauna. The snail mtDNA phylogeography is consistent with predictions from paleoclimate modeling in relation to the location and size of climatic refugia through the late Pleistocene-Holocene and broad patterns of extinction and recolonization. There is general agreement between quantitative estimates of population expansion from sequence data (using likelihood and coalescent methods) vs. distributional modeling. The snail phylogeography represents a composite of both common and idiosyncratic patterns seen among vertebrates, reflecting the geographically finer scale of persistence and subdivision in the snail. In general, this multifaceted approach, combining spatially explicit paleoclimatological models and comparative phylogeography, provides a powerful approach to locating historical refugia and understanding species' responses to them. PMID:11972064

Phylogeography of the endangered orchid Dendrobium moniliforme in East Asia inferred from chloroplast DNA sequences.

PubMed

Ye, Meirong; Liu, Wei; Xue, Qingyun; Hou, Beiwei; Luo, Jing; Ding, Xiaoyu

2017-11-01

The aim of the current study was to elucidate the phylogeographic history of Dendrobium moniliforme, an endangered orchid species, based on two chloroplast DNA (cpDNA) markers (trnC-petN and trnE-trnT). One hundred and thirty-five samples were collected from 18 natural populations of D. moniliforme covering the entire range of the Sino-Japanese Floristic Region (SJFR) of East Asia. A total of 35 distinct cpDNA haplotypes were identified in these populations, of which 23 haplotypes were each present in only one sample and thus restricted to a single population. The significantly larger N ST value (0.586) than G ST (0.328) (p < 0.05) demonstrated the presence of strong phylogeographic structure. Phylogenetic analyses indicated that all haplotypes were clustered into two lineages. The genetic diversity of D. moniliforme was high at the species level, reflected in its haplotype diversity (H d =0.8862), nucleotide diversity (P i =0.00361), total genetic diversity (H T =0.9011), and significant differentiation (Φ ST =0.5482). Based on mismatch distribution analysis and neutrality tests, population expansion was evident in all sampled populations and also in all populations sampled in mainland China. Three refuge areas were identified, one each in southwestern China, central-southeastern China, and the CKJ (Taiwan, Japan and Korea) Islands. The results supported the hypothesis that glacial refugia were maintained on different spatial-temporal scales in the SJFR during the last glacial maximum or earlier cold periods, suggesting that Quaternary refugial isolation promoted allopatric speciation of D. moniliforme in East Asia.

Researching the Rain Forest.

ERIC Educational Resources Information Center

Chazdon, Robin L.

1995-01-01

An autobiography of a female ecologist working in the Costa Rican rainforest is provided as an inspiration for girls. The scientist briefly tells her life story and describes her research activities. (LZ)

Falling palm fronds structure amazonian rainforest sapling communities.

PubMed

Peters, Halton A; Pauw, Anton; Silman, Miles R; Terborgh, John W

2004-08-07

The senescence and loss of photosynthetic and support structures is a nearly universal aspect of tree life history, and can be a major source of disturbance in forest understoreys, but the ability of falling canopy debris in determining the stature and composition of understorey communities seems not to have been documented. In this study, we show that senescent fronds of the palm Iriartea deltoidea cause substantial disturbance in tropical forest sapling communities. This disturbance influences the species composition of the canopy and subcanopy by acting as an ecological filter, favouring sapling species with characteristics conducive to recovery after physical damage. The scale of this dominance suggests that falling I. deltoidea debris may be influencing sapling community structure and species composition in Amazonian rainforests over very large spatial scales.

4,300-Year-old chimpanzee sites and the origins of percussive stone technology

PubMed Central

Mercader, Julio; Barton, Huw; Gillespie, Jason; Harris, Jack; Kuhn, Steven; Tyler, Robert; Boesch, Christophe

2007-01-01

Archaeological research in the African rainforest reveals unexpected results in the search for the origins of hominoid technology. The ancient Panin sites from Côte d'Ivoire constitute the only evidence of prehistoric ape behavior known to date anywhere in the world. Recent archaeological work has yielded behaviorally modified stones, dated by chronometric means to 4,300 years of age, lodging starch residue suggestive of prehistoric dietary practices by ancient chimpanzees. The “Chimpanzee Stone Age” pre-dates the advent of settled farming villages in this part of the African rainforest and suggests that percussive material culture could have been inherited from an common human–chimpanzee clade, rather than invented by hominins, or have arisen by imitation, or resulted from independent technological convergence. PMID:17360606

Rainforest aerosols as biogenic nuclei of clouds and precipitation in the Amazon.

PubMed

Pöschl, U; Martin, S T; Sinha, B; Chen, Q; Gunthe, S S; Huffman, J A; Borrmann, S; Farmer, D K; Garland, R M; Helas, G; Jimenez, J L; King, S M; Manzi, A; Mikhailov, E; Pauliquevis, T; Petters, M D; Prenni, A J; Roldin, P; Rose, D; Schneider, J; Su, H; Zorn, S R; Artaxo, P; Andreae, M O

2010-09-17

The Amazon is one of the few continental regions where atmospheric aerosol particles and their effects on climate are not dominated by anthropogenic sources. During the wet season, the ambient conditions approach those of the pristine pre-industrial era. We show that the fine submicrometer particles accounting for most cloud condensation nuclei are predominantly composed of secondary organic material formed by oxidation of gaseous biogenic precursors. Supermicrometer particles, which are relevant as ice nuclei, consist mostly of primary biological material directly released from rainforest biota. The Amazon Basin appears to be a biogeochemical reactor, in which the biosphere and atmospheric photochemistry produce nuclei for clouds and precipitation sustaining the hydrological cycle. The prevailing regime of aerosol-cloud interactions in this natural environment is distinctly different from polluted regions.

Rainforest Aerosols as Biogenic Nuclei of Clouds and Precipitation in the Amazon

NASA Astrophysics Data System (ADS)

Pöschl, U.; Martin, S. T.; Sinha, B.; Chen, Q.; Gunthe, S. S.; Huffman, J. A.; Borrmann, S.; Farmer, D. K.; Garland, R. M.; Helas, G.; Jimenez, J. L.; King, S. M.; Manzi, A.; Mikhailov, E.; Pauliquevis, T.; Petters, M. D.; Prenni, A. J.; Roldin, P.; Rose, D.; Schneider, J.; Su, H.; Zorn, S. R.; Artaxo, P.; Andreae, M. O.

2010-09-01

The Amazon is one of the few continental regions where atmospheric aerosol particles and their effects on climate are not dominated by anthropogenic sources. During the wet season, the ambient conditions approach those of the pristine pre-industrial era. We show that the fine submicrometer particles accounting for most cloud condensation nuclei are predominantly composed of secondary organic material formed by oxidation of gaseous biogenic precursors. Supermicrometer particles, which are relevant as ice nuclei, consist mostly of primary biological material directly released from rainforest biota. The Amazon Basin appears to be a biogeochemical reactor, in which the biosphere and atmospheric photochemistry produce nuclei for clouds and precipitation sustaining the hydrological cycle. The prevailing regime of aerosol-cloud interactions in this natural environment is distinctly different from polluted regions.

Multiple, novel biologically active endophytic actinomycetes isolated from upper Amazonian rainforests.

PubMed

Bascom-Slack, Carol A; Ma, Cong; Moore, Emily; Babbs, Beatrice; Fenn, Kathleen; Greene, Joshua S; Hann, Bradley D; Keehner, Jocelyn; Kelley-Swift, Elizabeth G; Kembaiyan, Vivek; Lee, Sun Jin; Li, Puyao; Light, David Y; Lin, Emily H; Schorn, Michelle A; Vekhter, Daniel; Boulanger, Lori-Ann; Hess, W M; Vargas, Percy Núñez; Strobel, Gary A; Strobel, Scott A

2009-08-01

Microbial biodiversity provides an increasingly important source of medically and industrially useful compounds. We have isolated 14 actinomycete species from a collection of approximately 300 plant stem samples from the upper Amazonian rainforest in Peru. All of the cultured isolates produce substances with inhibitory activity directed at a range of potential fungal and bacterial pathogens. For some organisms, this activity is very broad in spectrum while other organisms show specific activity against a limited number of organisms. Two of these organisms preferentially inhibit bacterial test organisms over eukaryotic organisms. rDNA sequence analysis indicates that these organisms are not equivalent to any other cultured deposits in GenBank. Our results provide evidence of the untapped biodiversity in the form of biologically active microbes present within the tissues of higher plants.