Seasonal variation in assisted conception cycles and the influence of photoperiodism on outcome in in vitro fertilization cycles.

PubMed

Wood, Simon; Quinn, Alison; Troupe, Stephen; Kingsland, Charles; Lewis-Jones, Iwan

2006-12-01

The effect of seasonality and daylight length on mammalian reproduction leading to spring births has been well established, and is known as photoperiodism. In assisted reproduction there is much greater uncertainty as to the effect of seasonality. This was a 4-year retrospective analysis of 2709 standardised cycles of IVF/ICSI. Data was analysed with regard to the 1642 cycles occurring during the months of extended daylight (Apr-Sept) and those 1067 cycles during winter months of restricted light length (Oct-Mar). The results showed that there was significant improvement in assisted conception outcomes in cycles performed in summer (lighter) months with more efficient ovarian stimulation 766iu v880iu/per oocyte retrieved (p=0.006). There was similarly a significantly improved implantation rate per embryo transferred 11.42% vs 9.35% (p=0.011) and greater clinical pregnancy rate 20% vs 15% (p=0.0033) during summer cycles. This study appears to demonstrate a significant benefit of increased daylight length on outcomes of IVF/ICSI cycles. Whilst the exact mechanism of this is unclear, it would seem probable that melatonin may have actions at multiple sites and on multiple levels of the reproductive tract, and may exert a more profound effect on outcomes of assisted conception cycles than has been previously considered.

Orbit Transfer Vehicle Engine Study. Phase A, extension 1: Advanced expander cycle engine optimization

NASA Technical Reports Server (NTRS)

Mellish, J. A.

1979-01-01

The performance optimization of expander cycle engines at vacuum thrust levels of 10K, 15K, and 20K lb is discussed. The optimization is conducted for a maximum engine length with an extendible nozzle in the retracted position of 60 inches and an engine mixture ratio of 6.0:1. The thrust chamber geometry and cycle analyses are documented. In addition, the sensitivity of a recommended baseline expander cycle to component performance variations is determined and chilldown/start propellant consumptions are estimated.

Observations of Space Weather and Space Climate Over the Past 15 Years From SABER (And Longer!)

NASA Technical Reports Server (NTRS)

Mlynczak, Marty; Hunt, Linda; Russell, James M., III

2016-01-01

The global infrared (IR) energy budget of the thermosphere has been reconstructed back 70 years (to 1947). IR cooling, integrated over a solar cycle, is relatively constant over the 5 complete cycles (19 -23) studied. Result implies that solar energy (particles and photons) has similar, small (< 7%) variation from one cycle to next. From Earth's upper atmosphere perspective, solar cycles are really more similar than different, over their length. No consistent relationship between peak of IR cooling and sunspot number peak. Results submitted to GRL 8/2016.

Reconstructing the 11-year solar cycle length from cosmogenic radionuclides for the last 600 years

NASA Astrophysics Data System (ADS)

Nilsson, Emma; Adolphi, Florian; Mekhaldi, Florian; Muscheler, Raimund

2017-04-01

The cyclic behavior of the solar magnetic field has been known for centuries and the 11-year solar cycle is one of the most important features directly visible on the solar disc. Using sunspot records it is evident that the length of this cycle is variable. A hypothesis of an inverse relationship between the average solar activity level and the solar cycle length has been put forward (e.g. Friis-Christensen & Lassen, 1991), indicating longer solar cycles during periods of low solar activity and vice versa. So far, studies of the behavior of the 11-year solar cycle have largely been limited for the last 4 centuries where observational sunspot data are available. However, cosmogenic radionuclides, such as 10Be and 14C from ice cores and tree rings allow an assessment of the strength of the open solar magnetic field due to its shielding influence on galactic cosmic rays in the heliosphere. Similarly, very strong solar storms can leave their imprint in cosmogenic radionuclide records via solar proton-induced direct production of cosmogenic radionuclides in the Earth atmosphere. Here, we test the hypothesis of an inverse relationship between solar cycle length and the longer-term solar activity level by using cosmogenic radionuclide records as a proxy for solar activity. Our results for the last six centuries suggest significant solar cycle length variations that could exceed the range directly inferred from sunspot records. We discuss the occurrence of SPEs within the 11-year solar cycle from a radionuclide perspective, specifically the largest one known yet, at AD 774-5 (Mekhaldi et al., 2015). References: Friis-Christensen, E. & Lassen, K. Length of the solar-cycle - An indicator of solar activity closely associated with climate. Science 254, 698-700, doi:10.1126/science.254.5032.698 (1991). Mekhaldi, F., Muscheler, R., Adolphi, F., Aldahan, A., Beer, J., McConnell, J. R., Possnert, G., Sigl, M., Svensson, A., Synal, H. A., Welten, K. C. & Woodruff, T. E. Multiradionuclide evidence for the solar origin of the cosmic-ray events of AD 774/5 and 993/4. Nature Communications 6: 8, doi:10.1038/ncomms9611 (2015).

Erratum: Evidence That a Deep Meridional Flow Sets the Sunspot Cycle Period

NASA Technical Reports Server (NTRS)

Hathaway, David H.; Nandy, Dibyendu; Wilson, Robert M.; Reichmann, Edwin J.

2004-01-01

An error was made in entering the data. This changes the results concerning the length of the time lag between the variations in the meridional flow speed and those in the cycle amplitude. The final paragraph on page 667 should read: Finally, we study the relationship between the drift velocities and the amplitudes of the hemisphere/cycles. We compare the drift velocity at the maximum of the cycle to the amplitude of that cycle for that hemisphere. There is a positive (0.5) and significant (95%) correlation between the two. However, an even stronger relationship is found between the drift velocity and the amplitude of the N + 2 cycle. The correlation is stronger (0.7) and more significant (99%), as shown. This relationship is suggestive of a "memory" in the solar cycle, again a property of dynamo models that use meridional circulation. Indeed, the two-cycle lag is precisely the relationship found by Charbonneau & Dikpati. This behavior is, however, more difficult to interpret, and we elaborate on this in the next section. In either case, these correlations only explain part of the variance in cycle amplitude (25% for the current cycle and 50% for the N + 2 cycle). Obviously, other mechanisms, such as variations in the gradient in the rotation rate, also contribute to the cycle amplitude variations. Our investigation of possible connections between drift rates and the amplitudes of the N + 1 and N + 3 cycles gives no significant correlations at these alternative time lags.

On the seat of the solar cycle

NASA Technical Reports Server (NTRS)

Gough, D.

1981-01-01

A discussion of some of the issues raised in connection with the seat of the solar cycle are presented. Is the cycle controlled by a strictly periodic oscillator that operates in the core, or is it a turbulent dynamo confined to the convection zone and possibly a thin boundary layer beneath it? Sunspot statistics are discussed, with a view to ascertaining the length of the memory of the cycle, without drawing a definitive conclusion. Also discussed are some of the processes that might bring about variations delta L and delta R in the luminosity and the radius of the photosphere. It appears that the ratio W = delta lnR/delta lnL increases with the depth of the disturbance that produces the variations, so that imminent observations might determine whether or not the principal dynamical processes are confined to only the outer layers of the Sun.

What water isotopes tell us about water cycle responses to climate change

NASA Astrophysics Data System (ADS)

Raudzens Bailey, A.; Singh, H. A.; Nusbaumer, J. M.; Dee, S.; Blossey, P. N.; Posmentier, E. S.

2017-12-01

The water cycle is expected to respond strongly to rising global temperatures. Models predict regional imbalances in evaporation and precipitation will intensify, resulting in a slowing of the large-scale circulation. This slowing will extend the moisture length scale by increasing the amount of time water resides in the atmosphere. However, verifying these changes observationally is challenging. Isotope ratios in water vapor and precipitation represent an integrated record of moisture's journey from evaporative source to precipitation sink. Consequently, they provide a unique opportunity to identify changes in moisture length scale associated with shifts in regional hydrologic balance. Leveraging satellite retrievals, box models, climate simulations, and in situ data, this presentation demonstrates how water isotope ratios can be used to estimate water cycle changes over the historical period and into the future. These changes are closely linked to variations in the divergence of atmospheric moisture fluxes, which result from variations in specific humidity, wind direction, and wind speed. This presentation highlights the extent to which isotopic measurements allow us to track changes in the dynamic, or wind-driven, component of moisture transport and to investigate whether remote moisture contributions are becoming increasingly important in augmenting local precipitation.

ROTATIONAL AND CYCLICAL VARIABILITY IN {gamma} CASSIOPEIAE. II. FIFTEEN SEASONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Henry, Gregory W.; Smith, Myron A., E-mail: gregory.w.henry@gmail.com, E-mail: msmith@stsci.edu

The B0.5 IVe star {gamma} Cas is of great interest because it is the prototype of a small group of classical Be stars having hard X-ray emission of unknown origin. We discuss results from ongoing B and V observations of the {gamma} Cas star-disk system acquired with an Automated Photometric Telescope during the observing seasons 1997-2011. In an earlier study, Smith, Henry, and Vishniac showed that light variations in {gamma} Cas are dominated by a series of comparatively prominent cycles with amplitudes of 0.02-0.03 mag and lengths of 2-3 months, superimposed on a 1.21 day periodic signal some five timesmore » smaller, which they attributed to rotation. The cycle lengths clustered around 70 days, with a total range of 50-91 days. Changes in both cycle length and amplitude were observed from year to year. These authors also found the V-band cycles to be 30%-40% larger than the B-band cycles. In the present study, we find continued evidence for these variability patterns and for the bimodal distribution of the {Delta}B/{Delta}V amplitude ratios in the long cycles. During the 2010 observing season, {gamma} Cas underwent a mass-loss event ({sup o}utburst{sup )}, as evidenced by the brightening and reddening seen in our new photometry. This episode coincided with a waning of the amplitude in the ongoing cycle. The Be outburst ended the following year, and the light-curve amplitude returned to pre-outburst levels. This behavior reinforces the interpretation that cycles arise from a global disk instability. We have determined a more precise value of the rotation period, 1.215811 {+-} 0.000030 days, using the longer 15-season data set and combining solutions from the V and B light curves. Remarkably, we also find that both the amplitude and the asymmetry of the rotational waveform changed over the years. We review arguments for this modulation arising from transits of a surface magnetic disturbance. Finally, to a limit of 5 mmag, we find no evidence for any photometric variation corresponding to the {gamma} Cas binary period, 203.55 days, or to the first few harmonics.« less

Qualification of a Quantitative Laryngeal Imaging System Using Videostroboscopy and Videokymography

PubMed Central

Popolo, Peter S.; Titze, Ingo R.

2008-01-01

Objectives: We sought to determine whether full-cycle glottal width measurements could be obtained with a quantitative laryngeal imaging system using videostroboscopy, and whether glottal width and vocal fold length measurements were repeatable and reliable. Methods: Synthetic vocal folds were phonated on a laboratory bench, and dynamic images were obtained in repeated trials by use of videostroboscopy and videokymography (VKG) with an imaging system equipped with a 2-point laser projection device for measuring absolute dimensions. Video images were also obtained with an industrial videoscope system with a built-in laser measurement capability. Maximum glottal width and vocal fold length were compared among these 3 methods. Results: The average variation in maximum glottal width measurements between stroboscopic data and VKG data was 3.10%. The average variations in width measurements between the clinical system and the industrial system were 1.93% (stroboscopy) and 3.49% (VKG). The variations in vocal fold length were similarly small. The standard deviations across trials were 0.29 mm for width and 0.48 mm for length (stroboscopy), 0.18 mm for width (VKG), and 0.25 mm for width and 0.84 mm for length (industrial). Conclusions: For stable, periodic vibration, the full extent of the glottal width can be reliably measured with the quantitative videostroboscopy system. PMID:18646436

Using the Modified Precursor Method to Estimate the Size of Cycle 24

NASA Technical Reports Server (NTRS)

Wilson, Robert M.; Hathaway, David H.

2008-01-01

Modified geomagnetic precursor techniques for predicting the size of the following sunspot cycle are developed, where these techniques use the 12-month moving averages of the number of disturbed days (when Ap greater than or equals 25), the Ap index, the aa index, and the aaI index at about 4 yr during the declining portion of the preceding sunspot cycle. For cycle 24, these techniques suggest that its RM will measure about 130 +/- 14, a value outside the consensus prediction interval of the low prediction (90 +/- 10) given by the NOAA Solar Cycle 24 Prediction Panel. Furthermore, cycle 24 is predicted to be a fast-rising cycle (ASC = 44 +/- 5 months), peaking before April 2012, presuming the official start of cycle 24 in March 2008. Also discussed are the variation of solar cycle lengths and Hale cycle effects, as related to cycles 23 and 24.

Implications of solar p-mode frequency shifts

NASA Technical Reports Server (NTRS)

Goldreich, Peter; Murray, Norman; Willette, Gregory; Kumar, Pawan

1991-01-01

An expression is derived that relates solar p-mode frequency shifts to changes in the entropy and magnetic field of the sun. The frequency variations result from changes in path length and propagation speed. Path length changes dominate for entropy perturbations, and propagation speed changes dominate for most types of magnetic field peturbations. The p-mode frequencies increased along with solar activity between 1986 and 1989; these frequency shifts exhibited a rapid rise with increasing frequency followed by a precipitous drop. The positive component of the shifts can be accounted for by variations of the mean square magnetic field strength in the vicinity of the photosphere. The magnetic stress perturbation decays above the top of the convection zone on a length scale comparable to the pressure scale height and grows gradually with depth below. The presence of a resonance in the chromospheric cavity means that the transition layer maintains enough coherence to partially reflect acoustic waves even near cycle maximum.

Erratum: ``Evidence that a Deep Meridional Flow Sets the Sunspot Cycle Period'' (ApJ, 589, 665 [2003])

NASA Astrophysics Data System (ADS)

Hathaway, David H.; Nandy, Dibyendu; Wilson, Robert M.; Reichmann, Edwin J.

2004-02-01

An error was made in entering the data used in Figure 6. This changes the results concerning the length of the time lag between the variations in the meridional flow speed and those in the cycle amplitude. The final paragraph on page 667 should read: ``Finally, we study the relationship between the drift velocities and the amplitudes of the hemisphere/cycles. In Figure 5 we compare the drift velocity at the maximum of the cycle to the amplitude of that cycle for that hemisphere. There is a positive (0.5) and significant (95%) correlation between the two. However, an even stronger relationship is found between the drift velocity and the amplitude of the N+2 cycle. The correlation is stronger (0.7) and more significant (99%), as shown in Figure 6. This relationship is suggestive of a ``memory'' in the solar cycle, again a property of dynamo models that use meridional circulation. Indeed, the two-cycle lag is precisely the relationship found by Charbonneau & Dikpati (ApJ, 589, 665 [2003]). This behavior is, however, more difficult to interpret, and we elaborate on this in the next section. In either case, these correlations only explain part of the variance in cycle amplitude (25% for the current cycle and 50% for the N+2 cycle). Obviously, other mechanisms, such as variations in the gradient in the rotation rate, also contribute to the cycle amplitude variations. Our investigation of possible connections between drift rates and the amplitudes of the N+1 and N+3 cycles gives no significant correlations at these alternative time lags.'' The revised Figure 6 and its caption are given below

A Solar-luminosity Model and Climate

NASA Technical Reports Server (NTRS)

Perry, Charles A.

1990-01-01

Although the mechanisms of climatic change are not completely understood, the potential causes include changes in the Sun's luminosity. Solar activity in the form of sunspots, flares, proton events, and radiation fluctuations has displayed periodic tendencies. Two types of proxy climatic data that can be related to periodic solar activity are varved geologic formations and freshwater diatom deposits. A model for solar luminosity was developed by using the geometric progression of harmonic cycles that is evident in solar and geophysical data. The model assumes that variation in global energy input is a result of many periods of individual solar-luminosity variations. The 0.1-percent variation of the solar constant measured during the last sunspot cycle provided the basis for determining the amplitude of each luminosity cycle. Model output is a summation of the amplitudes of each cycle of a geometric progression of harmonic sine waves that are referenced to the 11-year average solar cycle. When the last eight cycles in Emiliani's oxygen-18 variations from deep-sea cores were standardized to the average length of glaciations during the Pleistocene (88,000 years), correlation coefficients with the model output ranged from 0.48 to 0.76. In order to calibrate the model to real time, model output was graphically compared to indirect records of glacial advances and retreats during the last 24,000 years and with sea-level rises during the Holocene. Carbon-14 production during the last millenium and elevations of the Great Salt Lake for the last 140 years demonstrate significant correlations with modeled luminosity. Major solar flares during the last 90 years match well with the time-calibrated model.

Interactions between Genetic and Ecological Effects on the Evolution of Life Cycles.

PubMed

Rescan, Marie; Lenormand, Thomas; Roze, Denis

2016-01-01

Sexual reproduction leads to an alternation between haploid and diploid phases, whose relative length varies widely across taxa. Previous genetical models showed that diploid or haploid life cycles may be favored, depending on dominance interactions and on effective recombination rates. By contrast, niche differentiation between haploids and diploids may favor biphasic life cycles, in which development occurs in both phases. In this article, we explore the interplay between genetical and ecological factors, assuming that deleterious mutations affect the competitivity of individuals within their ecological niche and allowing different effects of mutations in haploids and diploids (including antagonistic selection). We show that selection on a modifier gene affecting the relative length of both phases can be decomposed into a direct selection term favoring the phase with the highest mean fitness (due to either ecological differences or differential effects of mutations) and an indirect selection term favoring the phase in which selection is more efficient. When deleterious alleles occur at many loci and in the presence of ecological differentiation between haploids and diploids, evolutionary branching often occurs and leads to the stable coexistence of alleles coding for haploid and diploid cycles, while temporal variations in niche sizes may stabilize biphasic cycles.

Modeling Cancer Cell Growth Dynamics In vitro in Response to Antimitotic Drug Treatment

PubMed Central

Lorz, Alexander; Botesteanu, Dana-Adriana; Levy, Doron

2017-01-01

Investigating the role of intrinsic cell heterogeneity emerging from variations in cell-cycle parameters and apoptosis is a crucial step toward better informing drug administration. Antimitotic agents, widely used in chemotherapy, target exclusively proliferative cells and commonly induce a prolonged mitotic arrest followed by cell death via apoptosis. In this paper, we developed a physiologically motivated mathematical framework for describing cancer cell growth dynamics that incorporates the intrinsic heterogeneity in the time individual cells spend in the cell-cycle and apoptosis process. More precisely, our model comprises two age-structured partial differential equations for the proliferative and apoptotic cell compartments and one ordinary differential equation for the quiescent compartment. To reflect the intrinsic cell heterogeneity that governs the growth dynamics, proliferative and apoptotic cells are structured in “age,” i.e., the amount of time remaining to be spent in each respective compartment. In our model, we considered an antimitotic drug whose effect on the cellular dynamics is to induce mitotic arrest, extending the average cell-cycle length. The prolonged mitotic arrest induced by the drug can trigger apoptosis if the time a cell will spend in the cell cycle is greater than the mitotic arrest threshold. We studied the drug’s effect on the long-term cancer cell growth dynamics using different durations of prolonged mitotic arrest induced by the drug. Our numerical simulations suggest that at confluence and in the absence of the drug, quiescence is the long-term asymptotic behavior emerging from the cancer cell growth dynamics. This pattern is maintained in the presence of small increases in the average cell-cycle length. However, intermediate increases in cell-cycle length markedly decrease the total number of cells and can drive the cancer population to extinction. Intriguingly, a large “switch-on/switch-off” increase in the average cell-cycle length maintains an active cell population in the long term, with oscillating numbers of proliferative cells and a relatively constant quiescent cell number. PMID:28913178

Estimating the Mean Annual Surface Air Temperature at Armagh Observatory, Northern Ireland, and the Global Land-Ocean Temperature Index for Sunspot Cycle 24, the Current Ongoing Sunspot Cycle

NASA Technical Reports Server (NTRS)

Wilson, Robert M.

2013-01-01

As noted by Gray et al., Sir William Herschel was the first to suggest a possible close connection between the Sun and the Earth’s climate. The Sun, being the source of energy that impacts and drives the Earth’s climate system, displays a variety of changes over both short and long term time scales, the most obvious examples being the somewhat regular waxing and waning of sunspots with time (i.e., the sunspot cycle (SC)), first described by Samuel Heinrich Schwabe, a German apothecary and amateur astronomer who observed the Sun from Dessau, Germany, and the now well established variation of the Sun’s irradiance over the SC. Other factors related to the SC have been linked to changes in climate as well. Some of these other factors include the role of cosmic rays and the solar wind (i.e., the geomagnetic cycle) on climate, as well as the apparent close association between trends in global and northern hemispheric temperature and the length of the SC, although some investigators have described the inferred association between climate and, in particular, SC length as now being weak. More recently, Solheim et al. have reported on the relation between SC length and the average temperature in the same and immediately following SC for a number of meteorological stations in Norway and in the North Atlantic region. They noted that while they found no significant trend (correlation) between SC length and the average temperature when measured for the same cycle, in contrast, they found a significant negative trend when SC length was compared with the following cycle’s average temperature. From this observation, they suggested that average northern hemispheric temperature during the present ongoing SC (SC24) will be lower by about 0.9 °C than was seen in SC23 (spanning 1996–2007, based on yearly averages of sunspot number (SSN), and onset for SC24 occurring in 2008). The purpose of this Technical Publication (TP) is to examine the annual variations of the Armagh surface air temperature (ASAT) and the Global Land-Ocean Temperature Index (GLOTI) in relation to SSN and the SC in order to determine their likely values during SC24. Hence, it may provide insight as to whether solar forcing of global temperature is now lessening as a contributor to global warming, thereby indicating a possible cooling in the near term immediate future that potentially could ameliorate the effect of increased anthropogenic warming.

A Standard Law for the Equatorward Drift of the Sunspot Zones

NASA Technical Reports Server (NTRS)

Hathaway, David H.

2012-01-01

The latitudinal location of the sunspot zones in each hemisphere is determined by calculating the centroid position of sunspot areas for each solar rotation from May 1874 to June 2012. When these centroid positions are plotted and analyzed as functions of time from each sunspot cycle maximum there appears to be systematic differences in the positions and equatorward drift rates as a function of sunspot cycle amplitude. If, instead, these centroid positions are plotted and analyzed as functions of time from each sunspot cycle minimum then most of the differences in the positions and equatorward drift rates disappear. The differences that remain disappear entirely if curve fitting is used to determine the starting times (which vary by as much as 8 months from the times of minima). The sunspot zone latitudes and equatorward drift measured relative to this starting time follow a standard path for all cycles with no dependence upon cycle strength or hemispheric dominance. Although Cycle 23 was peculiar in its length and the strength of the polar fields it produced, it too shows no significant variation from this standard. This standard law, and the lack of variation with sunspot cycle characteristics, is consistent with Dynamo Wave mechanisms but not consistent with current Flux Transport Dynamo models for the equatorward drift of the sunspot zones.

Northern Drosophila montana flies show variation both within and between cline populations in the critical day length evoking reproductive diapause.

PubMed

Lankinen, Pekka; Tyukmaeva, Venera I; Hoikkala, Anneli

2013-08-01

Reproductive diapause, and its correct timing, plays an important role in the life cycle of many insect species living in a seasonally varying environment at high latitudes. In the present paper we have documented variation in the critical day length (CDL) for adult reproductive diapause and the steepness of photoperiodic response curves (PPRCs) in seven clinal populations of Drosophila montana in Finland between the latitudes 61 and 67°N, paying special attention to variation in these traits within and between cline populations. The isofemale lines representing these populations showed a sharp transition from 0% to 100% in females' diapause incidence in the shortening day lengths, indicated by steep PPRCs. The mean CDL showed a clear latitudinal cline decreasing by 1.6h from North to South regardless of the age of the lines, variation within the populations (i.e. among lines) in this trait being up to 3h. The steepness of the PPRCs correlated with the age of the line and this trait showed no clear latitudinal cline. Further studies on a large number of lines from one D. montana population confirmed that while maintaining the flies in diapause preventing conditions in the laboratory has no effect on CDL, older lines had steeper PPRCs. High variation in CDL within and between D. montana cline populations is likely to be heritable and provide a good potential for the evolution of photoperiodic responses. Information on genetic variation in life-history traits, such as diapause, is of utmost importance for predicting the ability of insects to survive in seasonally changing environmental conditions and to respond to long term changes in the length of the growing period e.g. by postponing the timing of diapause towards shorter day length and later calendar date. Copyright © 2013 Elsevier Ltd. All rights reserved.

Time-of-night variations in the story-like organization of dream experience developed during rapid eye movement sleep.

PubMed

Cipolli, Carlo; Guazzelli, Mario; Bellucci, Claudia; Mazzetti, Michela; Palagini, Laura; Rosenlicht, Nicholas; Feinberg, Irwin

2015-04-01

This study aimed to investigate the cycles (2nd/4th) and duration-related (5/10 min) variations in the story-like organization of dream experience elaborated during rapid eye movement (REM) sleep. Dream reports were analysed using story grammar rules. Reports were provided by those subjects (14 of 22) capable of reporting a dream after each of the four awakenings provoked in 2 consecutive nights during REM sleep of the 2nd and 4th cycles, after periods of either 5 or 10 min, counterbalanced across the nights. Two researchers who were blind as to the sleep condition scored the dream reports independently. The values of the indicators of report length (measured as value of total word count) and of story-like organization of dream reports were matched taking time-of-night (2nd and 4th cycles) and REM duration (5 versus 10 min) as factors. Two-way analyses of variance showed that report length increased significantly in 4th-cycle REM sleep and nearly significantly for longer REM duration, whereas the number of dream-stories per report did not vary. The indices of sequential (number of statements describing the event structure developed in the story) and hierarchical (number of episodes per story) organization increased significantly only in dream-stories reported after 10 min of 4th-cycle REM sleep. These findings indicate that the characteristics of structural organization of dream-stories vary along with time of night, and suggest that the elaboration of a long and complex dream-story requires a fairly long time and the availability of a great amount of cognitive resources to maintain its continuity and coherence. © 2014 European Sleep Research Society.

Control of annual reproductive cycle in the subtropical house sparrow (Passer domesticus): evidence for conservation of photoperiodic control mechanisms in birds

PubMed Central

Trivedi, Amit K; Rani, Sangeeta; Kumar, Vinod

2006-01-01

Background In many birds, day length (=photoperiod) regulates reproductive cycle. The photoperiodic environment varies between different seasons and latitudes. As a consequence, species at different latitudes may have evolved separate photoperiodic strategies or modified them as per their adaptive need. We studied this using house sparrow as a model since it is found worldwide and is widely investigated. In particular, we examined whether photoperiodism in house sparrows (Passer domesticus) at 27°N, 81°E shared features with those exhibited by its conspecifics at high latitudes. Results Initial experiment described in the wild and captive conditions the gonad development and molt (only in captives) cycles over a 12-month period. Both male and female sparrows had similar seasonal cycles, linked with annual variations in day length; this suggested that seasonal reproduction in house sparrows was under the photoperiodic control. However, a slower testis and attenuated follicular growth among captives indicated that other (supplementary) factors are also involved in controlling the reproductive cycle. Next experiment examined if sparrows underwent seasonal variations in their response to stimulatory effects of long day lengths. When birds were transferred every month over a period of 1 year to 16 hours light:8 hours darkness (16L:8D) for 17–26 weeks, there was indeed a time-of-year effect on the growth-regression cycle of gonads. The final experiment investigated response of house sparrows to a variety of light-dark (LD) cycles. In the first set, sparrows were exposed for 31 weeks to photoperiods that were close to what they receive in between the period from sunrise to sunset at this latitude: 9L:15D (close to shortest day length in December), 12L:12D (equinox, in March and September) 15L:9D (close to longest day length in June). They underwent testicular growth and regression and molt in 12L and 15L photoperiods, but not in 9L photoperiod. In the second set, sparrows were exposed for 17 weeks to photoperiods with light periods extending to different duration of the daily photosensitivity rhythm (e.g. 2L:22D, 6L:18D, 10L:14D, 14L:10D, 18L:6D and 22L:2D). Interestingly, a slow and small testicular response occurred under 2L and 10L photoperiods; 6L:18D was non-inductive. On the other hand, 14L, 18L and 22L photoperiods produced testicular growth and subsequent regression response as is typical of a long day photostimulation. Conclusion Subtropical house sparrows exhibit photoperiodic responses similar to that is reported for its population living at high latitudes. This may suggest the conservation of the photoperiodic control mechanisms in birds evolved over a long period of time, as a physiological strategy in a temporally changing environment ensuring reproduction at the best suited time of the year. PMID:16923197

Understanding Seasonal Dynamics of the Photo-Protective Xanthophyll Cycle Improves Remote Detection of Photosynthetic Phenology in Deciduous Trees and Evergreen Conifers

NASA Astrophysics Data System (ADS)

Ensminger, I.; Wong, C. Y.; Junker, L. V.; Bathena, Y.; Arain, M. A.; D'Odorico, P.

2017-12-01

The ability of plants to sequester carbon is highly variable over the course of the year and reflects seasonal variation in photosynthetic efficiency. This seasonal variation is most prominent during autumn, when leaves of deciduous tree species undergo senescence, which is associated with the downregulation of photosynthesis and a change of leaf color and leaf optical properties. Vegetation indices derived from remote sensing of leaf optical properties using e.g. spectral reflectance measurements are increasingly used to monitor and predict growing season length and seasonal variation in carbon sequestration. Here we compare leaf-level, canopy-level and drone based observations of leaf spectral reflectance measurements. We demonstrate that some of the widely used vegetation indices such as the normalized difference vegetation index (NDVI) and photochemical reflectance index (PRI) vary in their ability to adequately track the seasonal variation in photosynthetic efficiency and chlorophyll content. We further show that monitoring seasonal variation of photosynthesis using NDVI or PRI is particularly challenging in evergreen conifers, due to little seasonal variation in foliage. However, there is remarkable seasonal variation in leaf optical properties associated with changes in pools of xanthophyll cycle pigments and carotenoids that provide a promising way of monitoring photosynthetic phenology in evergreen conifers via leaf reflectance measurements.

Onset of menstrual cycle and menses features among secondary school girls in Italy: A questionnaire study on 3,783 students.

PubMed

De Sanctis, Vincenzo; Bernasconi, Sergio; Bianchin, Luigi; Bona, Gianni; Bozzola, Mauro; Buzi, Fabio; De Sanctis, Carlo; Rigon, Franco; Tatò, Luciano; Tonini, Giorgio; Perissinotto, Egle

2014-11-01

Healthcare professionals need updated information about what is the range of "normal" variation of menstrual cycle features to support young girls and their parents in managing reproductive health, and to detect diseases early. This cross-sectional study aimed to provide an updated picture of age at menarche and main menstrual cycle characteristics and complaints in an Italian population-based sample of 3,783 adolescents attending secondary school. Girls filled in a self-administered anonymous questionnaire including questions about demography, anthropometry, smoking and drinking habits, use of contraceptive, socioeconomic status, age at menarche, menstrual pattern, and physical/psychological menstrual complaints. Mean age at menarche and prevalence of polymenorrhea (cycle length < 21 days), oligomenorrhea (cycle length > 35 days), irregularity, dysmenorrhea, and of physical/psychological complaints were computed. Factors associated with age at menarche and menstrual disturbances were explored by using multiple logistic models. The girls' mean age was 17.1 years (SD 1.4 years) and the mean age at menarche was 12.4 years (SD 1.3 years); menarche occurred with two monthly peaks of frequency in July-September and in December-January (P < 0.0001). Age at menarche was significantly associated with geographic genetics (as expressed by parents' birth area), mother's menarcheal age, BMI, family size, and age at data collection. The prevalence of polymenorrhea was about 2.5%, oligomenorrhea was declared by 3.7%, irregular length by 8.3%, while long bleeding (>6 days) was shown in 19.6% of girls. Gynecological age was significantly associated with cycle length (P < 0.0001) with long cycles becoming more regular within the fourth year after menarche, while frequency of polymenorrhea stabilized after the second gynecological year. Oligomenorrhea and irregularity were both significantly associated with long menstrual bleeding (adjusted OR = 2.36; 95% CI = 1.55-3.60, and adjusted OR = 2.59; 95% CI = 1.95-3.44, respectively). The findings of the study support the levelling-off of secular trend in menarche anticipation in Italy and confirm the timing in menstrual cycle regularization. The study provides updated epidemiological data on frequency of menstrual abnormalities to help reproductive health professionals in managing adolescent gynecology.

PHOTOMETRIC TRENDS IN THE VISIBLE SOLAR CONTINUUM AND THEIR SENSITIVITY TO THE CENTER-TO-LIMB PROFILE

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peck, C. L.; Rast, M. P.

2015-08-01

Solar irradiance variations over solar rotational timescales are largely determined by the passage of magnetic structures across the visible solar disk. Variations on solar cycle timescales are thought to be similarly due to changes in surface magnetism with activity. Understanding the contribution of magnetic structures to total solar irradiance and solar spectral irradiance requires assessing their contributions as a function of disk position. Since only relative photometry is possible from the ground, the contrasts of image pixels are measured with respect to a center-to-limb intensity profile. Using nine years of full-disk red and blue continuum images from the Precision Solarmore » Photometric Telescope at the Mauna Loa Solar Observatory, we examine the sensitivity of continuum contrast measurements to the center-to-limb profile definition. Profiles which differ only by the amount of magnetic activity allowed in the pixels used to determine them yield oppositely signed solar cycle length continuum contrast trends, either agreeing with previous results and showing negative correlation with solar cycle or disagreeing and showing positive correlation with solar cycle. Changes in the center-to-limb profile shape over the solar cycle are responsible for the contradictory contrast results, and we demonstrate that the lowest contrast structures, internetwork and network, are most sensitive to these. Thus the strengths of the full-disk, internetwork, and network photometric trends depend critically on the magnetic flux density used in the quiet-Sun definition. We conclude that the contributions of low contrast magnetic structures to variations in the solar continuum output, particularly to long-term variations, are difficult, if not impossible, to determine without the use of radiometric imaging.« less

Fibre optic technique for simultaneous measurement of strain and temperature variations in composite materials

NASA Astrophysics Data System (ADS)

Michie, W. C.; Culshaw, Brian; Roberts, Scott S. J.; Davidson, Roger

1991-12-01

A technique based upon the differential sensitivities of dual mode and polarimetric sensing schemes is shown to be capable of resolving simultaneously temperature and strain variations to within 20 micro-epsilon and 1 K over a strain and temperature excursion of 2 micro-epsilon and 45 K. The technique is evaluated experimentally over an 80 cm sensing length of unembedded optical fiber and in an 8 ply unidirectional carbon/epoxide laminate subject to temperature and strain cycling. A comparative analysis of the performance of the embedded and the unembedded fiber sensors is presented.

Evolution of time-keeping mechanisms: early emergence and adaptation to photoperiod

PubMed Central

Hut, R. A.; Beersma, D. G. M.

2011-01-01

Virtually all species have developed cellular oscillations and mechanisms that synchronize these cellular oscillations to environmental cycles. Such environmental cycles in biotic (e.g. food availability and predation risk) or abiotic (e.g. temperature and light) factors may occur on a daily, annual or tidal time scale. Internal timing mechanisms may facilitate behavioural or physiological adaptation to such changes in environmental conditions. These timing mechanisms commonly involve an internal molecular oscillator (a ‘clock’) that is synchronized (‘entrained’) to the environmental cycle by receptor mechanisms responding to relevant environmental signals (‘Zeitgeber’, i.e. German for time-giver). To understand the evolution of such timing mechanisms, we have to understand the mechanisms leading to selective advantage. Although major advances have been made in our understanding of the physiological and molecular mechanisms driving internal cycles (proximate questions), studies identifying mechanisms of natural selection on clock systems (ultimate questions) are rather limited. Here, we discuss the selective advantage of a circadian system and how its adaptation to day length variation may have a functional role in optimizing seasonal timing. We discuss various cases where selective advantages of circadian timing mechanisms have been shown and cases where temporarily loss of circadian timing may cause selective advantage. We suggest an explanation for why a circadian timing system has emerged in primitive life forms like cyanobacteria and we evaluate a possible molecular mechanism that enabled these bacteria to adapt to seasonal variation in day length. We further discuss how the role of the circadian system in photoperiodic time measurement may explain differential selection pressures on circadian period when species are exposed to changing climatic conditions (e.g. global warming) or when they expand their geographical range to different latitudes or altitudes. PMID:21690131

Propagation of single-cycle terahertz pulses in random media.

PubMed

Pearce, J; Mittleman, D M

2001-12-15

We describe what are to our knowledge the first measurements of the propagation of coherent, single-cycle pulses of terahertz radiation in a scattering medium. By measuring the transmission as a function of the length L of the medium, we extract the scattering mean free path l(s)(omega) over a broad bandwidth. We observe variations in l(s) ranging over nearly 2 orders of magnitude and covering the entire thin sample regime from L/l(s)<1 to L/l(s)~10 . We also observe scattering-induced dispersive effects, which can be attributed to the additional path traveled by photons scattered at small angles.

A connection between long-term luminosity variations and orbital period changes in chromospherically active binaries

NASA Technical Reports Server (NTRS)

Hall, Douglas S.

1991-01-01

The eclipsing binary CG Cyg provides observational confirmation of three predictions made by Applegate's (1991) improvement on the theory that magnetic cycles cause the quasi-periodic orbital period changes in binaries containing a convective star. The mean brightness outside eclipse and the period vary with the same cycle length of about 50 yr. The light curve and O - C curve are in phase, with maximum light and period increase occurring in early 1980. The chromospherically active star becomes bluer in phase with the brightening. Because a period increase occurs at maximum brightness, the sense of the star's differential rotation is specified: outside rotating faster.

Global and regional axial ocean angular momentum signals and length-of-day variations (1985-1996)

NASA Astrophysics Data System (ADS)

Ponte, Rui M.; Stammer, Detlef

2000-07-01

Changes in ocean angular momentum M about the polar axis are related to fluctuations in zonal currents (relative component Mr) and latitudinal shifts in mass (planetary component MΩ). Output from a 1° ocean model is used to calculate global Mr, MΩ, and M time series at 5 day intervals for the period January 1985 to April 1996. The annual cycle in Mr, MΩ, and M is larger than the semiannual cycle, and MΩ amplitudes are nearly twice those of Mr. Year-to-year modulation of the seasonal cycle is present, but interannual variability is weak. The spectrum of M is red (background slope between ω-1 and ω-2) at subseasonal periods, implying a white or blue spectrum for the external torque on the ocean. Comparisons with previous studies indicate the importance of direct atmospheric forcing in inducing subseasonal M signals, relative to instabilities and other internal sources of rapid oceanic signals. Regional angular momentum estimates show that seasonal variability tends to be larger at low latitudes, but many local maxima exist because of the spatial structure of zonal current and mass variability. At seasonal timescales, latitudes ~20°S-10°N contribute substantial variability to MΩ, while signals in Mr can be traced to Antarctic Circumpolar Current transports and associated circulation. Variability in M is found to be small when compared with similar time series for the atmosphere and the solid Earth, but ocean signals are significantly coherent with atmosphere-solid Earth residuals, implying a measurable oceanic impact on length-of-day variations.

Voice Signals Produced With Jitter Through a Stochastic One-mass Mechanical Model.

PubMed

Cataldo, Edson; Soize, Christian

2017-01-01

The quasiperiodic oscillation of the vocal folds causes perturbations in the length of the glottal cycles, which are known as jitter. The observation of the glottal cycles variations suggests that jitter is a random phenomenon described by random deviations of the glottal cycle lengths in relation to a corresponding mean value and, in general, its values are expressed as a percentage of the duration of the glottal pulse. The objective of this paper is the construction of a stochastic model for jitter using a one-mass mechanical model of the vocal folds, which assumes complete right-left symmetry of the vocal folds, and which considers motions of the vocal folds only in the horizontal direction. The jitter has been the subject for researchers due to its important applications such as the identification of pathological voices (nodules in the vocal folds, paralysis of the vocal folds, or even, the vocal aging, among others). Large values for jitter variations can indicate a pathological characteristic of the voice. The corresponding stiffness of each vocal fold is considered as a stochastic process, and its modeling is proposed. The probability density function of the fundamental frequency related to the voice signals produced are constructed and compared for different levels of jitter. Some samples of synthesized voices in these cases are obtained. It is showed that jitter could be obtained using the model proposed. The Praat software was also used to verify the measures of jitter in the synthesized voice signals. Copyright © 2017 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

Day-night and reproductive cycle profiles of melatonin receptor, kiss, and gnrh expression in orange-spotted grouper (Epinephelus coioides).

PubMed

Chai, Ke; Liu, Xiaochun; Zhang, Yong; Lin, Haoran

2013-07-01

It is suggested that the MT1 melatonin receptor mediates the effects of melatonin on reproduction in rodents. Three melatonin receptor types, MT1, MT2, and Mel1c, have been identified in fish. To understand the potential roles of each type of melatonin receptor on reproduction, we explored the day-night and reproductive cycle profiles of melatonin receptor, kiss, and gnrh expression in the orange-spotted grouper (Epinephelus coioides). cDNAs encoding melatonin receptors (MT1, MT2, and Mel1c) were first isolated from the brain of the orange-spotted grouper. Quantitative real-time PCR analysis demonstrated that the expression levels of MT1 and MT2 were higher in most of the brain areas and pituitary, while mel1c mRNA was mainly distributed in some peripheral tissues and the pituitary. The expression levels of MT1 were much higher than those of MT2 and mel1c in most of the brain regions, and the day-night expression variations of MT1 were counter to those of kiss2 and gnrh1. Reproductive cycle variations in MT1 daytime expression were different from those for kiss2 and gnrh1, and contrary to ovarian fecundity. Our results suggest that MT1 may modulate gnrh1 expression through kiss2, or may directly influence it. Together, these signal cascades may regulate the seasonal breeding of the orange-spotted grouper. As the day-length variations were consistent with the ovarian fecundity variation observed during the reproductive cycle, we infer that photoperiod affects ovarian development of the orange-spotted grouper through MT1. Copyright © 2013 Wiley Periodicals, Inc.

Evidence for photometric activity cycles in 3203 Kepler stars

NASA Astrophysics Data System (ADS)

Reinhold, Timo; Cameron, Robert H.; Gizon, Laurent

2017-07-01

Context. In recent years it has been claimed that the length of stellar activity cycles is determined by the stellar rotation rate. It has been observed that the cycle period increases with rotation period along two distinct sequences, known as the active and inactive sequences. In this picture the Sun occupies a solitary position between the two sequences. Whether the Sun might undergo a transitional evolutionary stage is currently under debate. Aims: Our goal is to measure cyclic variations of the stellar light curve amplitude and the rotation period using four years of Kepler data. Periodic changes in the light curve amplitude or the stellar rotation period are associated with an underlying activity cycle. Methods: Using a recent sample of active stars we compute the rotation period and the variability amplitude for each individual Kepler quarter and search for periodic variations of both time series. To test for periodicity in each stellar time series we consider Lomb-Scargle periodograms and use a selection based on a false alarm probability (FAP). Results: We detect amplitude periodicities in 3203 stars between 0.5 < Pcyc < 6 yr covering rotation periods between 1 < Prot < 40 days. Given our sample size of 23 601 stars and our selection criteria that the FAP is less than 5%, this number is almost three times higher than that expected from pure noise. We do not detect periodicities in the rotation period beyond those expected from noise. Our measurements reveal that the cycle period shows a weak dependence on rotation rate, slightly increasing for longer rotation periods. We further show that the shape of the variability deviates from a pure sine curve, consistent with observations of the solar cycle. The cycle shape does not show a statistically significant dependence on effective temperature. Conclusions: We detect activity cycles in more than 13% of our final sample with a FAP of 5% (calculated by randomly shuffling the measured 90-day variability measurements for each star). Our measurements do not support the existence of distinct sequences in the Prot-Pcyc plane, although there is some evidence for the inactive sequence for rotation periods between 5-25 days. Unfortunately, the total observing time is too short to draw sound conclusions on activity cycles with similar lengths to that of the solar cycle. A table containing all cycle periods and time series is only available in electronic form at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (130.79.128.5) or via http://cdsweb.u-strasbg.fr/cgi-bin/qcat?J/A+A/603/A52

An Empirical Orthogonal Function Reanalysis of the Northern Polar External and Induced Magnetic Field During Solar Cycle 23

NASA Astrophysics Data System (ADS)

Shore, R. M.; Freeman, M. P.; Gjerloev, J. W.

2018-01-01

We apply the method of data-interpolating empirical orthogonal functions (EOFs) to ground-based magnetic vector data from the SuperMAG archive to produce a series of month length reanalyses of the surface external and induced magnetic field (SEIMF) in 110,000 km2 equal-area bins over the entire northern polar region at 5 min cadence over solar cycle 23, from 1997.0 to 2009.0. Each EOF reanalysis also decomposes the measured SEIMF variation into a hierarchy of spatiotemporal patterns which are ordered by their contribution to the monthly magnetic field variance. We find that the leading EOF patterns can each be (subjectively) interpreted as well-known SEIMF systems or their equivalent current systems. The relationship of the equivalent currents to the true current flow is not investigated. We track the leading SEIMF or equivalent current systems of similar type by intermonthly spatial correlation and apply graph theory to (objectively) group their appearance and relative importance throughout a solar cycle, revealing seasonal and solar cycle variation. In this way, we identify the spatiotemporal patterns that maximally contribute to SEIMF variability over a solar cycle. We propose this combination of EOF and graph theory as a powerful method for objectively defining and investigating the structure and variability of the SEIMF or their equivalent ionospheric currents for use in both geomagnetism and space weather applications. It is demonstrated here on solar cycle 23 but is extendable to any epoch with sufficient data coverage.

The influence of quarantine on reproductive cycling in wild-caught Baboons (Papio anubis).

PubMed

Liechty, Emma R; Wang, Diane Y; Chen, Emily; Chai, Daniel; Bell, Jason D; Bergin, Ingrid L

2015-12-01

Stress impacts nonhuman primate menstrual cycle length but the impact of quarantine is unknown. A retrospective analysis was performed on cycle data from 31 wild-caught baboons during and following quarantine. Cycling initiated in 94 days (19-181) and length normalized within 4-6 cycles. Quarantine significantly impacts menstrual cycle length. © 2015 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Modeling Individual Cyclic Variation in Human Behavior.

PubMed

Pierson, Emma; Althoff, Tim; Leskovec, Jure

2018-04-01

Cycles are fundamental to human health and behavior. Examples include mood cycles, circadian rhythms, and the menstrual cycle. However, modeling cycles in time series data is challenging because in most cases the cycles are not labeled or directly observed and need to be inferred from multidimensional measurements taken over time. Here, we present Cyclic Hidden Markov Models (CyH-MMs) for detecting and modeling cycles in a collection of multidimensional heterogeneous time series data. In contrast to previous cycle modeling methods, CyHMMs deal with a number of challenges encountered in modeling real-world cycles: they can model multivariate data with both discrete and continuous dimensions; they explicitly model and are robust to missing data; and they can share information across individuals to accommodate variation both within and between individual time series. Experiments on synthetic and real-world health-tracking data demonstrate that CyHMMs infer cycle lengths more accurately than existing methods, with 58% lower error on simulated data and 63% lower error on real-world data compared to the best-performing baseline. CyHMMs can also perform functions which baselines cannot: they can model the progression of individual features/symptoms over the course of the cycle, identify the most variable features, and cluster individual time series into groups with distinct characteristics. Applying CyHMMs to two real-world health-tracking datasets-of human menstrual cycle symptoms and physical activity tracking data-yields important insights including which symptoms to expect at each point during the cycle. We also find that people fall into several groups with distinct cycle patterns, and that these groups differ along dimensions not provided to the model. For example, by modeling missing data in the menstrual cycles dataset, we are able to discover a medically relevant group of birth control users even though information on birth control is not given to the model.

Modeling Individual Cyclic Variation in Human Behavior

PubMed Central

Pierson, Emma; Althoff, Tim; Leskovec, Jure

2018-01-01

Cycles are fundamental to human health and behavior. Examples include mood cycles, circadian rhythms, and the menstrual cycle. However, modeling cycles in time series data is challenging because in most cases the cycles are not labeled or directly observed and need to be inferred from multidimensional measurements taken over time. Here, we present Cyclic Hidden Markov Models (CyH-MMs) for detecting and modeling cycles in a collection of multidimensional heterogeneous time series data. In contrast to previous cycle modeling methods, CyHMMs deal with a number of challenges encountered in modeling real-world cycles: they can model multivariate data with both discrete and continuous dimensions; they explicitly model and are robust to missing data; and they can share information across individuals to accommodate variation both within and between individual time series. Experiments on synthetic and real-world health-tracking data demonstrate that CyHMMs infer cycle lengths more accurately than existing methods, with 58% lower error on simulated data and 63% lower error on real-world data compared to the best-performing baseline. CyHMMs can also perform functions which baselines cannot: they can model the progression of individual features/symptoms over the course of the cycle, identify the most variable features, and cluster individual time series into groups with distinct characteristics. Applying CyHMMs to two real-world health-tracking datasets—of human menstrual cycle symptoms and physical activity tracking data—yields important insights including which symptoms to expect at each point during the cycle. We also find that people fall into several groups with distinct cycle patterns, and that these groups differ along dimensions not provided to the model. For example, by modeling missing data in the menstrual cycles dataset, we are able to discover a medically relevant group of birth control users even though information on birth control is not given to the model. PMID:29780976

Differential Scanning Calorimetric (DSC) Analysis of Rotary Nickel-Titanium (NiTi) Endodontic File (RNEF)

NASA Astrophysics Data System (ADS)

Wu, Ray Chun Tung; Chung, C. Y.

2012-12-01

To determine the variation of A f along the axial length of rotary nickel-titanium endodontic files (RNEF). Three commercial brands of 4% taper RNEF: GTX (#20, 25 mm, Dentsply Tulsa Dental Specialties, Tulsa, OK, USA), K3 (#25, 25 mm) and TF (Twisted File #25, 27 mm) (Sybron Kerr, Orange, CA, USA) were cut into segments at 4 mm increment from the working tip. Regional specimens were measured for differential heat-flow over thermal cycling, generally with continuous heating or cooling (5 °C/min) and 5 min hold at set temperatures (start, finish temperatures): GTX: -55, 90 °C; K3: -55, 45 °C; TF: -55, 60 °C; using differential scanning calorimeter. This experiment demonstrated regional differences in A f along the axial length of GTX and K3 files. Similar variation was not obvious in the TF samples. A contributory effect of regional difference in strain-hardening due to grinding and machining during manufacturing is proposed.

The timing of GIGANTEA expression during day/night cycles varies with the geographical origin of Arabidopsis accessions.

PubMed

de Montaigu, Amaury; Coupland, George

2017-07-03

Latitudinal clines in circadian rhythms have consistently been described in various plant species, with the most recent examples appearing in soybean cultivars and in monkey flower natural populations. These latitudinal clines provide evidence that natural variation in circadian rhythms is adaptive, but it is still unclear what adaptive benefits this variation confers, particularly because circadian rhythms are not usually measured in day/night conditions that reflect those experienced by organisms in nature. Here, we report that daily rhythms of GIGANTEA expression respond to day length in a way that depends on the latitude of origin of Arabidopsis accessions. We additionally extend previous findings by confirming that natural variation in GI expression affects growth related traits, and alters the expression of different target genes. The results support the idea that natural variation in daily rhythms of expression have broad effects on plant development and are of potential adaptive value.

Variation of Solar, Interplanetary and Geomagnetic Parameters during Solar Cycles 21-24

NASA Astrophysics Data System (ADS)

Oh, Suyeon; Kim, Bogyeong

2013-06-01

The length of solar cycle 23 has been prolonged up to about 13 years. Many studies have speculated that the solar cycle 23/24 minimum will indicate the onset of a grand minimum of solar activity, such as the Maunder Minimum. We check the trends of solar (sunspot number, solar magnetic fields, total solar irradiance, solar radio flux, and frequency of solar X-ray flare), interplanetary (interplanetary magnetic field, solar wind and galactic cosmic ray intensity), and geomagnetic (Ap index) parameters (SIG parameters) during solar cycles 21-24. Most SIG parameters during the period of the solar cycle 23/24 minimum have remarkably low values. Since the 1970s, the space environment has been monitored by ground observatories and satellites. Such prevalently low values of SIG parameters have never been seen. We suggest that these unprecedented conditions of SIG parameters originate from the weakened solar magnetic fields. Meanwhile, the deep 23/24 solar cycle minimum might be the portent of a grand minimum in which the global mean temperature of the lower atmosphere is as low as in the period of Dalton or Maunder minimum.

Local homogeneity of cell cycle length in developing mouse cortex

NASA Technical Reports Server (NTRS)

Cai, L.; Hayes, N. L.; Nowakowski, R. S.

1997-01-01

We have measured the amount of variation in the length of the cell cycle for cells in the pseudostratified ventricular epithelium (PVE) of the developing cortex of mice on embryonic day 14. Our measurements were made in three cortical regions (i.e., the neocortex, archicortex, and periarchicortex) using three different methods: the cumulative labeling method (CLM), the percent labeled mitoses (PLM) method, and a comparison of the time needed for the PLM to ascend from 0 to 100% with the time needed for the PLM to descend from 100 to 0%. These 3 different techniques provide different perspectives on the cytokinetic parameters. Theoretically, CLM gives an estimate for a maximum value of the total length of the cell cycle (TC), whereas PLM gives an estimate of a minimum value of TC. The difference between these two estimates indicates that the range for TC is +/-1% of the mean TC for periarchicortex, +/-7% for neocortex, and +/-8% for archicortex. This was confirmed by a lengthening of the PLM descent time in comparison with its ascent time. The sharpness of the transitions and the flatness of the plateau of the PLM curves indicate that 99% of the proliferating cells are within this narrow estimated range for TC; hence, only approximately 1% deviate outside of a relatively restricted range from the average TC of the population. In the context of the possible existence within the cortical PVE of two populations with markedly dissimilar cell cycle kinetics from the mean, one such population must comprise approximately 99% of the total population, and the other, if it exists, is only approximately 1% of the total. This seems to be true for all three cortical regions. The narrow range of TC indicates a homogeneity in the cell cycle length for proliferating cells in three different cortical regions, despite the fact that progenitor cells of different lineages may be present. It further predicts the existence of almost synchronous interkinetic nuclear movements of the proliferating cells in the ventricular zone during early development of the cerebral cortex.

Accounting for length-bias and selection effects in estimating the distribution of menstrual cycle length

PubMed Central

Lum, Kirsten J.; Sundaram, Rajeshwari; Louis, Thomas A.

2015-01-01

Prospective pregnancy studies are a valuable source of longitudinal data on menstrual cycle length. However, care is needed when making inferences of such renewal processes. For example, accounting for the sampling plan is necessary for unbiased estimation of the menstrual cycle length distribution for the study population. If couples can enroll when they learn of the study as opposed to waiting for the start of a new menstrual cycle, then due to length-bias, the enrollment cycle will be stochastically larger than the general run of cycles, a typical property of prevalent cohort studies. Furthermore, the probability of enrollment can depend on the length of time since a woman’s last menstrual period (a backward recurrence time), resulting in selection effects. We focus on accounting for length-bias and selection effects in the likelihood for enrollment menstrual cycle length, using a recursive two-stage approach wherein we first estimate the probability of enrollment as a function of the backward recurrence time and then use it in a likelihood with sampling weights that account for length-bias and selection effects. To broaden the applicability of our methods, we augment our model to incorporate a couple-specific random effect and time-independent covariate. A simulation study quantifies performance for two scenarios of enrollment probability when proper account is taken of sampling plan features. In addition, we estimate the probability of enrollment and the distribution of menstrual cycle length for the study population of the Longitudinal Investigation of Fertility and the Environment Study. PMID:25027273

Regional Variation in Geniohyoid Muscle Strain During Suckling in the Infant Pig

PubMed Central

HOLMAN, SHAINA DEVI; KONOW, NICOLAI; LUKASIK, STACEY L.; GERMAN, REBECCA Z.

2014-01-01

The geniohyoid muscle (GH) is a critical suprahyoid muscle in most mammalian oropharyngeal motor activities. We used sonomicrometry to evaluate regional strain (i.e., changes in length) in the muscle origin, belly, and insertion during suckling in infant pigs, and compared the results to existing information on strain heterogeneity in the hyoid musculature. We tested the hypothesis that during rhythmic activity, the GH shows regional variation in muscle strain. We used sonomicrometry transducer pairs to divide the muscle into three regions from anterior to posterior. The results showed differences in strain among the regions within a feeding cycle; however, no region consistently shortened or lengthened over the course of a cycle. Moreover, regional strain patterns were not correlated with timing of the suck cycles, neither (1) relative to a swallow cycle (before or after) nor (2) to the time in feeding sequence (early or late). We also found a tight relationship between muscle activity and muscle strain, however, the relative timing of muscle activity and muscle strain was different in some muscle regions and between individuals. A dissection of the C1 innervations of the geniohyoid showed that there are between one and three branches entering the muscle, possibly explaining the variation seen in regional activity and strain. In combination, our findings suggest that regional heterogeneity in muscle strain during patterned suckling behavior functions to stabilize the hyoid bone, whereas the predictable regional strain differences in reflexive behaviors may be necessary for faster and higher amplitude movements of the hyoid bone. PMID:22549885

Contraction dynamics and function of the muscle-tendon complex depend on the muscle fibre-tendon length ratio: a simulation study.

PubMed

Mörl, Falk; Siebert, Tobias; Häufle, Daniel

2016-02-01

Experimental studies show different muscle-tendon complex (MTC) functions (e.g. motor or spring) depending on the muscle fibre-tendon length ratio. Comparing different MTC of different animals examined experimentally, the extracted MTC functions are biased by, for example, MTC-specific pennation angle and fibre-type distribution or divergent experimental protocols (e.g. influence of temperature or stimulation on MTC force). Thus, a thorough understanding of variation of these inner muscle fibre-tendon length ratios on MTC function is difficult. In this study, we used a hill-type muscle model to simulate MTC. The model consists of a contractile element (CE) simulating muscle fibres, a serial element (SE) as a model for tendon, and a parallel elastic element (PEE) modelling tissue in parallel to the muscle fibres. The simulation examines the impact of length variations of these components on contraction dynamics and MTC function. Ensuring a constant overall length of the MTC by L(MTC) = L(SE) + L(CE), the SE rest length was varied over a broad physiological range from 0.1 to 0.9 MTC length. Five different MTC functions were investigated by simulating typical physiological experiments: the stabilising function with isometric contractions, the motor function with contractions against a weight, the capability of acceleration with contractions against a small inertial mass, the braking function by decelerating a mass, and the spring function with stretch-shortening cycles. The ratio of SE and CE mainly determines the MTC function. MTC with comparably short tendon generates high force and maximal shortening velocity and is able to produce maximal work and power. MTC with long tendon is suitable to store and release a maximum amount of energy. Variation of muscle fibre-tendon ratio yielded two peaks for MTC's force response for short and long SE lengths. Further, maximum work storage capacity of the SE is at long relL(SE,0). Impact of fibre-tendon length ratio on MTC functions will be discussed. Considering a constant set of MTC parameters, quantitative changes in MTC performance (work, stiffness, force, energy storage, dissipation) depending on varying muscle fibre-tendon length ratio were provided, which enables classification and grading of different MTC designs.

Living on the edge: latitudinal variations in the reproductive biology of two coastal species of sharks.

PubMed

Taylor, S M; Harry, A V; Bennett, M B

2016-11-01

Differences in the reproductive biology of both the Australian weasel shark Hemigaleus australiensis and the Australian sharpnose shark Rhizoprionodon taylori were apparent between individuals from the southern-most extent of their range in eastern Australia (Moreton Bay) and those from northern Australia. For H. australiensis from Moreton Bay the total length (L T ) at which 50% of individuals were mature (L T50 ) was 759 mm for females and 756 mm for males, values that were respectively 17-26% larger than reported for the species in northern Australia. The relatively low percentage (63%) of pregnant mature females and presence of small, similar-sized, embryos in utero in both May and November suggested a semi-synchronous, annual reproductive cycle in Moreton Bay, whereas a synchronous, biannual reproductive cycle occurred in northern Australia. It is likely that H. australiensis has a resting phase between gestation cycles at the southern-most extent of its range. For R. taylori from Moreton Bay the L T50 s were 588 and 579 mm for females and males, respectively, values 2-3% larger than for individuals from the mid-Queensland coast and 31-35% larger than for individuals from northern Australia. The length at which 50% of the females were maternal (611 mm L T ) in Moreton Bay was greater than the L T50 , indicating that not all sharks mate immediately after maturing. Rhizoprionodon taylori in the south had an annual reproductive cycle incorporating a 7-8 month embryonic diapause, with pups probably born in February. A mean fecundity of 7·5 was almost double that reported from northern Australia. Regional variations in the reproductive characteristics of H. australiensis and R. taylori may influence their resilience to fishing and other anthropogenic pressures. The substantial differences reported here highlight the importance of region-specific life-history parameters to successful management and conservation. © 2016 The Fisheries Society of the British Isles.

Intra-lake variation in maturity, fecundity, and spawning of slimy sculpins (Cottus cognatus) in southern Lake Ontario

USGS Publications Warehouse

Owens, Randall W.; Noguchi, George E.

1998-01-01

Knowledge of the spawning cycle and factors affecting fecundity of slimy sculpins (Cottus cognatus) are important in understanding the population dynamics of this species in large lake systems, like Lake Ontario. Fecundity and the spawning cycle of slimy sculpins were described from samples of slimy sculpins and their egg masses collected with bottom trawls during four annual surveys, April to October, 1988 to 1994. Incidence of gravid females and collections of their egg masses indicated that spawning by slimy sculpins likely occurred from late April to mid October in Lake Ontario. Protracted spawning by slimy sculpins in Lake Ontario is probably a function of the annual water temperature cycle at various depths. Mean length of gravid females was inversely related to density of slimy sculpins. Fecundity ranged from 55 to 1,157 eggs among fish 55 to 127 mm long, and for similar-sized fish, fecundity was inversely related to density of slimy sculpins. Fecundity was about 50% higher at Olcott, where population indices of slimy sculpins were low, compared with Nine Mile Point where indices were much higher. Somatic weight or total length were both good predictors of fecundity. Lipid content of slimy sculpins was lower in an area of high sculpin abundance than in an area of low sculpin abundance, suggesting that fecundity was a function of density-dependent food availability. In large aquatic ecosystems, samples from more than one area may be necessary to describe fecundity of a sedentary species like slimy sculpin, especially if fish densities vary considerably among geographic areas. Large geographic variations in fecundity may be an indicator of spatial imbalance of a species with its prey. Low fecundity may be a compensatory response to slimy sculpins to low food supplies, thereby limiting population growth.

Global and Regional Axial Ocean Angular Momentum Signals and Length-of-day Variations (1985-1996)

NASA Technical Reports Server (NTRS)

Ponte, Rui M.; Stammer, Detlef

2000-01-01

Changes in ocean angular momentum M about the polar axis are related to fluctuations in zonal currents (relative component M(sub tau) and latitudinal shifts in mass (planetary component M(sub Omega). Output from a 1 deg. ocean model is used to calculate global M(sub tau), (sub Omega), and M time series at 5 day intervals for the period January 1985 to April 1996. The annual cycle in M(sub tau), M(sub Omega), and M is larger than the semiannual cycle, and M(sub Omega) amplitudes are nearly twice those of M(sub tau). Year-to-year modulation of the seasonal cycle is present, but interannual variability is weak. The spectrum of M is red (background slope between omega(sup -1) and omega(sup -2) at sub-seasonal periods, implying a white or blue spectrum for the external torque on the ocean. Comparisons with previous studies indicate the importance of direct atmospheric forcing in inducing sub-seasonal M signals, relative to instabilities and other internal sources of rapid oceanic signals. Regional angular momentum estimates show that seasonal variability tends to be larger at low latitudes, but many local maxima exist because of the spatial structure of zonal current and mass variability. At seasonal timescales, latitudes approx. 20 deg. S - 10 deg. N contribute substantial variability to M(sub Omega), while signals in M(sub tau) can be traced to Antarctic Circumpolar Current transports and associated circulation. Variability in M is found to be small when compared with similar time series for the atmosphere and the solid Earth, but ocean signals are significantly coherent with atmosphere-solid Earth residuals, implying a measurable oceanic impact on length-of-day variations.

Global and Regional Axial Ocean Angular Momentum Signals and Length-of-Day Variations (1985-1996)

NASA Technical Reports Server (NTRS)

Ponte, Rui M.; Stammer, Detlef

1999-01-01

Changes in ocean angular momentum about the polar axis (M) are related to fluctuations in zonal currents (relative component M(sub r)) and latitudinal shifts in mass (planetary component M(sub Omega)). Output from a 1 deg ocean model is used to calculate global M(sub r), M(sub Omega), and M time series at 5-day intervals for the period January 1985-April 1996. The annual cycle in M(sub r), M(sub Omega), and M is larger than the semiannual cycle, and M(sub Omega) amplitudes are nearly twice those of M(sub r). Year-to-year modulation of the seasonal cycle is present, but interannual variability is weak. The spectrum of M is red (background slope between omega(sup (-1) and omega(sup -2)) at subseasonal periods, implying a white or blue spectrum for the external torque on the ocean. Comparisons with previous studies indicate the importance of direct atmospheric forcing in inducing subseasonal M signals, relative to instabilities and other internal sources of rapid oceanic signals. Regional angular momentum estimates show that seasonal variability tends to be larger at low latitudes but there are many local maxima due to the spatial structure of zonal current and mass variability. At seasonal timescales, latitudes approximately 20 S - 10 N contribute substantial variability to M(sub Omega), while signals in M(sub r) can be traced to Antarctic Circumpolar Current transports and associated circulation. Variability in M is found to be small when compared with similar time series for the atmosphere and the solid Earth, but ocean signals are significantly coherent with atmosphere-solid Earth residuals, implying a measurable oceanic impact on length-of-day variations.

Effect of Air Pollution on Menstrual Cycle Length-A Prognostic Factor of Women's Reproductive Health.

PubMed

Merklinger-Gruchala, Anna; Jasienska, Grazyna; Kapiszewska, Maria

2017-07-20

Air pollution can influence women's reproductive health, specifically menstrual cycle characteristics, oocyte quality, and risk of miscarriage. The aim of the study was to assess whether air pollution can affect the length of the overall menstrual cycle and the length of its phases (follicular and luteal). Municipal ecological monitoring data was used to assess the air pollution exposure during the monitored menstrual cycle of each of 133 woman of reproductive age. Principal component analyses were used to group pollutants (PM 10 , SO₂, CO, and NO x ) to represent a source-related mixture. PM 10 and SO₂ assessed separately negatively affected the length of the luteal phase after standardization (b = -0.02; p = 0.03; b = -0.06; p = 0.02, respectively). Representing a fossil fuel combustion emission, they were also associated with luteal phase shortening (b = -0.32; p = 0.02). These pollutants did not affect the follicular phase length and overall cycle length, neither in single- nor in multi-pollutant models. CO and NO x assessed either separately or together as a traffic emission were not associated with overall cycle length or the length of cycle phases. Luteal phase shortening, a possible manifestation of luteal phase deficiency, can result from fossil fuel combustion. This suggests that air pollution may contribute to fertility problems in women.

Periodical climate variations and their impact on Earth rotation for the last 800Kyr

NASA Astrophysics Data System (ADS)

Chapanov, Yavor; Gambis, Daniel

2010-05-01

The Earth rotation variations are highly affected by climatic variations associated with the glacial cycles in the late Pleistocene. The processes of glaciation, followed by ice melting, are connected with significant changes of the mean sea level. These processes redistribute great amount of water masses between oceans and ice sheets, which lead to changes of the axial moment of inertia and corresponding variations of the Universal Time UT1 and Length of Day LOD, according to the law of angular momentum conservation. The climatic variations for the last 800Kyr are analyzed by means of time series of temperature changes, determined by deuterium data from Antarctica ice core. Reconstructed glacial sea level variations for the last 380Kyr, determined by the sediments from the Red sea, are used, too. Common periodicities of the temperature and mean sea level variations are determined. Time series of the long-periodical UT1 and LOD oscillations for the last 380Kyr and 800Kyr are reconstructed by means of empirical hydrological model of global water redistribution between the ocean and ice sheets during the last glacial events.

Spectrum Fatigue of 7075-T651 Aluminum Alloy under Overloading and Underloading

DTIC Science & Technology

2016-03-15

underload, stress ratio, and environment on fatigue crack growth. Fatigue crack growth tests were conducted with a 7075-T651 aluminum alloy under constant...the UniGrow equation, the variation of crack length with number of loading cycle was predicted. The prediction and the fatigue test life were found to...Standard Form 298 (Rev. 8-98) Prescribed by ANSI Std. Z39-18 REPORT NO. NAWCADPAX/TIM-2015/282 ii SUMMARY Fatigue tests of 7075-T651

Accounting for length-bias and selection effects in estimating the distribution of menstrual cycle length.

PubMed

Lum, Kirsten J; Sundaram, Rajeshwari; Louis, Thomas A

2015-01-01

Prospective pregnancy studies are a valuable source of longitudinal data on menstrual cycle length. However, care is needed when making inferences of such renewal processes. For example, accounting for the sampling plan is necessary for unbiased estimation of the menstrual cycle length distribution for the study population. If couples can enroll when they learn of the study as opposed to waiting for the start of a new menstrual cycle, then due to length-bias, the enrollment cycle will be stochastically larger than the general run of cycles, a typical property of prevalent cohort studies. Furthermore, the probability of enrollment can depend on the length of time since a woman's last menstrual period (a backward recurrence time), resulting in selection effects. We focus on accounting for length-bias and selection effects in the likelihood for enrollment menstrual cycle length, using a recursive two-stage approach wherein we first estimate the probability of enrollment as a function of the backward recurrence time and then use it in a likelihood with sampling weights that account for length-bias and selection effects. To broaden the applicability of our methods, we augment our model to incorporate a couple-specific random effect and time-independent covariate. A simulation study quantifies performance for two scenarios of enrollment probability when proper account is taken of sampling plan features. In addition, we estimate the probability of enrollment and the distribution of menstrual cycle length for the study population of the Longitudinal Investigation of Fertility and the Environment Study. Published by Oxford University Press 2014. This work is written by (a) US Government employee(s) and is in the public domain in the US.

Probing cooperative force generation in collective cancer invasion

NASA Astrophysics Data System (ADS)

Alobaidi, Amani A.; Xu, Yaopengxiao; Chen, Shaohua; Jiao, Yang; Sun, Bo

2017-08-01

Collective cellular dynamics in the three-dimensional extracellular matrix (ECM) plays a crucial role in many physiological processes such as cancer invasion. Both chemical and mechanical signaling support cell-cell communications on a variety of length scales, leading to collective migratory behaviors. Here we conduct experiments using 3D in vitro tumor models and develop a phenomenological model in order to probe the cooperativity of force generation in the collective invasion of breast cancer cells. In our model, cell-cell communication is characterized by a single parameter that quantifies the correlation length of cellular migration cycles. We devise a stochastic reconstruction method to generate realizations of cell colonies with specific contraction phase correlation functions and correlation length a. We find that as a increases, the characteristic size of regions containing cells with similar contraction phases grows. For small a values, the large fluctuations in individual cell contraction phases smooth out the temporal fluctuations in the time-dependent deformation field in the ECM. For large a values, the periodicity of an individual cell contraction cycle is clearly manifested in the temporal variation of the overall deformation field in the ECM. Through quantitative comparisons of the simulated and experimentally measured deformation fields, we find that the correlation length for collective force generation in the breast cancer diskoid in geometrically micropatterned ECM (DIGME) system is a≈ 25~μ \\text{m} , which is roughly twice the linear size of a single cell. One possible mechanism for this intermediate cell correlation length is the fiber-mediated stress propagation in the 3D ECM network in the DIGME system.

Spurious Additional Warming Reconstructed From Borehole Temperatures Corrected for the Effect of the Last Glacial Cycle

NASA Astrophysics Data System (ADS)

Šafanda, Jan

2018-03-01

Reconstructions of past ground surface temperature changes from temperature logs conducted in several hundred meter deep boreholes have proved to be a valuable independent source of information on climate variations over the last millennium. The reconstruction techniques have been evolving for more than two decades to extract optimally the climate signal of the last millennium contained in the temperature logs of different length performed in sites with different histories of the Last Glacial Cycle. This paper analyzes the method of the Last Glacial Cycle thermal effect removal from such borehole temperature profiles used by Beltrami et al. (2017, https://doi.org/10.1002/2016GL071317) in reconstructing the last 500 year history. I show that the reported results of additional warming in this period reconstructed from the corrected borehole data for North America are an artifact generated by the correction.

Cobalt silicate hierarchical hollow spheres for lithium-ion batteries.

PubMed

Yang, Jun; Guo, Yuanyuan; Zhang, Yufei; Sun, Chencheng; Yan, Qingyu; Dong, Xiaochen

2016-09-09

In this paper, the synthesis of cobalt silicate novel hierarchical hollow spheres via a facile hydrothermal method is presented. With a unique hollow structure, the Co2SiO4 provides a large surface area, which can shorten the lithium ions diffusion length and effectively accommodate the volumetic variation during the lithiation/de-lithiation process. Serving as an anode material in lithium-ion battery application, the Co2SiO4 electrode demonstrates a high reversible specific capacity (first-cycle charge capacity of 948.6 mAh g(-1) at 100 mA g(-1)), a cycling durability (specific capacity of 791.4 mAh g(-1) after 100 cycles at 100 mA g(-1)), and a good rate capability (specific capacity of 349.4 mAh g(-1) at 10 A g(-1)). The results indicate that the cobalt silicate hierarchical hollow sphere holds the potential applications in energy storage electrodes.

Correlation of the earth's rotation rate and the secular change of the geomagnetic field. [power spectra/harmonic analysis

NASA Technical Reports Server (NTRS)

Jin, R. S.

1975-01-01

Power spectral density analysis using Burg's maximum entropy method was applied to the geomagnetic dipole field and its rate of change for the years 1901 to 1969. Both spectra indicate relative maxima at 0.015 cycles/year and its harmonics. These maxima correspond approximately to 66, 33, 22, 17, 13, 11, and 9-year spectral lines. The application of the same analysis techniques to the length-of-day (l.o.d) fluctuations for the period 1865 to 1961 reveal similar spectral characteristics. Although peaks were observed at higher harmonics of the fundamental frequency, the 22-year and 11-year lines are not attributed unambiguously to the solar magnetic cycle and the solar cycle. It is suggested that the similarity in the l.o.d fluctuations and the dipole field variations is related to the motion within the earth's fluid core during the past one hundred years.

Bond–Slip Relationship for CFRP Sheets Externally Bonded to Concrete under Cyclic Loading

PubMed Central

Li, Ke; Cao, Shuangyin; Yang, Yue; Zhu, Juntao

2018-01-01

The objective of this paper was to explore the bond–slip relationship between carbon fiber-reinforced polymer (CFRP) sheets and concrete under cyclic loading through experimental and analytical approaches. Modified beam tests were performed in order to gain insight into the bond–slip relationship under static and cyclic loading. The test variables are the CFRP-to-concrete width ratio, and the bond length of the CFRP sheets. An analysis of the test results in this paper and existing test results indicated that the slope of the ascending segment of the bond–slip curve decreased with an increase in the number of load cycles, but the slip corresponding to the maximum shear stress was almost invariable as the number of load cycles increased. In addition, the rate of reduction in the slope of the ascending range of the bond–slip curve during cyclic loading decreased as the concrete strength increased, and increased as the load level or CFRP-to-concrete width ratio enhanced. However, these were not affected by variations in bond length if the residual bond length was longer than the effective bond length. A bilinear bond–slip model for CFRP sheets that are externally bonded to concrete under cyclic loading, which considered the effects of the cyclic load level, concrete strength, and CFRP-to-concrete ratio, was developed based on the existing static bond–slip model. The accuracy of this proposed model was verified by a comparison between this proposed model and test results. PMID:29495383

Bond-Slip Relationship for CFRP Sheets Externally Bonded to Concrete under Cyclic Loading.

PubMed

Li, Ke; Cao, Shuangyin; Yang, Yue; Zhu, Juntao

2018-02-26

The objective of this paper was to explore the bond-slip relationship between carbon fiber-reinforced polymer (CFRP) sheets and concrete under cyclic loading through experimental and analytical approaches. Modified beam tests were performed in order to gain insight into the bond-slip relationship under static and cyclic loading. The test variables are the CFRP-to-concrete width ratio, and the bond length of the CFRP sheets. An analysis of the test results in this paper and existing test results indicated that the slope of the ascending segment of the bond-slip curve decreased with an increase in the number of load cycles, but the slip corresponding to the maximum shear stress was almost invariable as the number of load cycles increased. In addition, the rate of reduction in the slope of the ascending range of the bond-slip curve during cyclic loading decreased as the concrete strength increased, and increased as the load level or CFRP-to-concrete width ratio enhanced. However, these were not affected by variations in bond length if the residual bond length was longer than the effective bond length. A bilinear bond-slip model for CFRP sheets that are externally bonded to concrete under cyclic loading, which considered the effects of the cyclic load level, concrete strength, and CFRP-to-concrete ratio, was developed based on the existing static bond-slip model. The accuracy of this proposed model was verified by a comparison between this proposed model and test results.

Voluntary wheel running in dystrophin-deficient (mdx) mice: Relationships between exercise parameters and exacerbation of the dystrophic phenotype.

PubMed

Smythe, Gayle M; White, Jason D

2011-12-18

Voluntary wheel running can potentially be used to exacerbate the disease phenotype in dystrophin-deficient mdx mice. While it has been established that voluntary wheel running is highly variable between individuals, the key parameters of wheel running that impact the most on muscle pathology have not been examined in detail. We conducted a 2-week test of voluntary wheel running by mdx mice and the impact of wheel running on disease pathology. There was significant individual variation in the average daily distance (ranging from 0.003 ± 0.005 km to 4.48 ± 0.96 km), culminating in a wide range (0.040 km to 67.24 km) of total cumulative distances run by individuals. There was also variation in the number and length of run/rest cycles per night, and the average running rate. Correlation analyses demonstrated that in the quadriceps muscle, a low number of high distance run/rest cycles was the most consistent indicator for increased tissue damage. The amount of rest time between running bouts was a key factor associated with gastrocnemius damage. These data emphasize the need for detailed analysis of individual running performance, consideration of the length of wheel exposure time, and the selection of appropriate muscle groups for analysis, when applying the use of voluntary wheel running to disease exacerbation and/or pre-clinical testing of the efficacy of therapeutic agents in the mdx mouse.

Microform-related community patterns of methane-cycling microbes in boreal Sphagnum bogs are site specific.

PubMed

Juottonen, Heli; Kotiaho, Mirkka; Robinson, Devin; Merilä, Päivi; Fritze, Hannu; Tuittila, Eeva-Stiina

2015-09-01

Vegetation and water table are important regulators of methane emission in peatlands. Microform variation encompasses these factors in small-scale topographic gradients of dry hummocks, intermediate lawns and wet hollows. We examined methane production and oxidization among microforms in four boreal bogs that showed more variation of vegetation within a bog with microform than between the bogs. Potential methane production was low and differed among bogs but not consistently with microform. Methane oxidation followed water table position with microform, showing higher rates closer to surface in lawns and hollows than in hummocks. Methanogen community, analysed by mcrA terminal restriction fragment length polymorphism and dominated by Methanoregulaceae or 'Methanoflorentaceae', varied strongly with bog. The extent of microform-related variation of methanogens depended on the bog. Methanotrophs identified as Methylocystis spp. in pmoA denaturing gradient gel electrophoresis similarly showed effect of bog, and microform patterns were stronger within individual bogs. Our results suggest that methane-cycling microbes in boreal Sphagnum bogs with seemingly uniform environmental conditions may show strong site-dependent variation. The bog-intrinsic factor may be related to carbon availability but contrary to expectations appears to be unrelated to current surface vegetation, calling attention to the origin of carbon substrates for microbes in bogs. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

ExoMars Lander Radioscience LaRa, a Space Geodesy Experiment to Mars.

NASA Astrophysics Data System (ADS)

Dehant, V.; Le Maistre, S.; Baland, R. M.; Yseboodt, M.; Peters, M. J.; Karatekin, O.; Rivoldini, A.; Van Hoolst, T.

2017-09-01

The LaRa (Lander Radioscience) experiment is designed to obtain coherent two-way Doppler measurements from the radio link between the ExoMars lander and Earth over at least one Martian year. The Doppler measurements will be used to observe the orientation and rotation of Mars in space (precession, nutations, and length-of-day variations), as well as polar motion. The ultimate objective is to obtain information / constraints on the Martian interior, and on the sublimation / condensation cycle of atmospheric CO2. Rotational variations will allow us to constrain the moment of inertia of the entire planet, including its mantle and core, the moment of inertia of the core, and seasonal mass transfer between the atmosphere and the ice caps.

Relationship Between the Menstrual Cycle and Timing of Ovulation Revealed by New Protocols: Analysis of Data from a Self-Tracking Health App.

PubMed

Sohda, Satoshi; Suzuki, Kenta; Igari, Ichiro

2017-11-27

There are many mobile phone apps aimed at helping women map their ovulation and menstrual cycles and facilitating successful conception (or avoiding pregnancy). These apps usually ask users to input various biological features and have accumulated the menstrual cycle data of a vast number of women. The purpose of our study was to clarify how the data obtained from a self-tracking health app for female mobile phone users can be used to improve the accuracy of prediction of the date of next ovulation. Using the data of 7043 women who had reliable menstrual and ovulation records out of 8,000,000 users of a mobile phone app of a health care service, we analyzed the relationship between the menstrual cycle length, follicular phase length, and luteal phase length. Then we fitted a linear function to the relationship between the length of the menstrual cycle and timing of ovulation and compared it with the existing calendar-based methods. The correlation between the length of the menstrual cycle and the length of the follicular phase was stronger than the correlation between the length of the menstrual cycle and the length of the luteal phase, and there was a positive correlation between the lengths of past and future menstrual cycles. A strong positive correlation was also found between the mean length of past cycles and the length of the follicular phase. The correlation between the mean cycle length and the luteal phase length was also statistically significant. In most of the subjects, our method (ie, the calendar-based method based on the optimized function) outperformed the Ogino method of predicting the next ovulation date. Our method also outperformed the ovulation date prediction method that assumes the middle day of a mean menstrual cycle as the date of the next ovulation. The large number of subjects allowed us to capture the relationships between the lengths of the menstrual cycle, follicular phase, and luteal phase in more detail than previous studies. We then demonstrated how the present calendar methods could be improved by the better grouping of women. This study suggested that even without integrating various biological metrics, the dataset collected by a self-tracking app can be used to develop formulas that predict the ovulation day when the data are aggregated. Because the method that we developed requires data only on the first day of menstruation, it would be the best option for couples during the early stages of their attempt to have a baby or for those who want to avoid the cost associated with other methods. Moreover, the result will be the baseline for more advanced methods that integrate other biological metrics. ©Satoshi Sohda, Kenta Suzuki, Ichiro Igari. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 27.11.2017.

Chlorination by-products in drinking water and menstrual cycle function.

PubMed

Windham, Gayle C; Waller, Kirsten; Anderson, Meredith; Fenster, Laura; Mendola, Pauline; Swan, Shanna

2003-06-01

We analyzed data from a prospective study of menstrual cycle function and early pregnancy loss to explore further the effects of trihalomethanes (THM) on reproductive end points. Premenopausal women ((italic)n(/italic) = 403) collected urine samples daily during an average of 5.6 cycles for measurement of steroid metabolites that were used to define menstrual parameters such as cycle and phase length. Women were asked about consumption of various types of water as well as other habits and demographics. A THM level was estimated for each cycle based on residence and quarterly measurements made by water utilities during a 90-day period beginning 60 days before the cycle start date. We found a monotonic decrease in mean cycle length with increasing total THM (TTHM) level; at > 60 microg/L, the adjusted decrement was 1.1 days [95% confidence interval (CI), -1.8 to -0.40], compared with less than or equal to 40 microg/L. This finding was also reflected as a reduced follicular phase length (difference -0.94 day; 95% CI, -1.6 to -0.24). A decrement in cycle and follicular phase length of 0.18 days (95% CI, -0.29 to -0.07) per 10 microg/L unit increase in TTHM concentration was found. There was little association with luteal phase length, menses length, or cycle variability. Examining the individual THMs by quartile, we found the greatest association with chlorodibromomethane or the sum of the brominated compounds. Incorporating tap water consumption showed a similar pattern of reduced cycle length with increasing TTHM exposure. These findings suggest that THM exposure may affect ovarian function and should be confirmed in other studies.

Modification of atrioventricular nodal electrophysiology by selective radiofrequency delivery on the anterior or posterior approaches.

PubMed

Chorro, F J; Sanchis, J; Such, L; Artal, L; Llavador, J J; Llavador, E; Monmeneu, J V; López-Merino, V

1997-05-01

An analysis was made in 14 isolated and perfused rabbit hearts of the electrophysiological effects of selective radiofrequency (RF) delivery in the anterior (group I, n = 7) or posterior zone (group II, n = 7) of the Koch triangle, with the aim of modifying atrioventricular nodal (AVN) conduction without suppressing 1:1 transmission. After opening the right atrium, RF was delivered (0.5 W) with a 1-mm diameter unipolar electrode positioned in the selected zone until a prolongation of no less than 15% was obtained in the Wenckebach cycle length (WCL). Before and after (30 min) RF, anterograde and retrograde AVN refractoriness and conduction were evaluated, stimulating from the crista terminalis (CT), the interatrial septum (IAS), and from the RV epicardium. After RF, the following percentage increments were observed in group I: AH(CT) = 36% +/- 9%, AH(IAS) = 38% +/- 11%, WCL(CT) = 28% +/- 8%, WCL(IAS) = 22% +/- 6%, functional refractory period (FRP) of the AVN(CT) = 13% +/- 11%, FRP-AVN(IAS) = 13% +/- 8%, retrograde WCL = 20% +/- 19%, and retrograde FRPVA = 13% +/- 16%. The increments observed in group II and the significances of the differences with respect to group I were: AH(CT) = 11% +/- 14% (P < 0.01), AH(IAS) = 19% +/- 32% (NS), WCL(CT) = 42% +/- 14% (P < 0.05), WCL(IAS) = 42% +/- 16% (P < 0.01), FRP-AVN(CT) = 28% +/- 28% (NS), FRP-AVN(LAS) = 21% +/- 19% (NS), retrograde WCL = 35% +/- 24% (NS), and retrograde FRP = 16% +/- 13% (NS). In both groups, the AH interval variations were not correlated with those of the rest of the parameters analyzed. Truncated nodal function curves suggestive of a dual AV nodal pathway were obtained in three experiments, though in only one of them was this observed under basal conditions. In the other two experiments, with dual AV nodal physiology only after RF (one from each group), AV nodal reentrant tachycardias were triggered with atrial extrastimulus at coupling intervals equal to or shorter than at those that cause a sudden lengthening of the AH interval, RF delivered in the anterior and posterior zones of the Koch triangle produced effects of different magnitude on the AH interval and Wenckebach cycle length. In the anterior zone the AH interval was prolonged to a greater extent, while in the posterior zone the effects were greater on the Wenckebach cycle length. No correlation existed between the variations in AH interval and Wenckebach cycle length, regardless of where RF was delivered. The evaluation of anterograde AV nodal refractoriness was similar when stimulating from the crista terminalis or from the interatrial septum. By delivering RF, it was possible to induce dual AV nodal physiology and reentrant tachycardias.

A statistical analysis of energy and power demand for the tractive purposes of an electric vehicle in urban traffic - an analysis of a short and long observation period

NASA Astrophysics Data System (ADS)

Slaski, G.; Ohde, B.

2016-09-01

The article presents the results of a statistical dispersion analysis of an energy and power demand for tractive purposes of a battery electric vehicle. The authors compare data distribution for different values of an average speed in two approaches, namely a short and long period of observation. The short period of observation (generally around several hundred meters) results from a previously proposed macroscopic energy consumption model based on an average speed per road section. This approach yielded high values of standard deviation and coefficient of variation (the ratio between standard deviation and the mean) around 0.7-1.2. The long period of observation (about several kilometers long) is similar in length to standardized speed cycles used in testing a vehicle energy consumption and available range. The data were analysed to determine the impact of observation length on the energy and power demand variation. The analysis was based on a simulation of electric power and energy consumption performed with speed profiles data recorded in Poznan agglomeration.

Effect of Air Pollution on Menstrual Cycle Length—A Prognostic Factor of Women’s Reproductive Health

PubMed Central

Merklinger-Gruchala, Anna; Jasienska, Grazyna; Kapiszewska, Maria

2017-01-01

Air pollution can influence women’s reproductive health, specifically menstrual cycle characteristics, oocyte quality, and risk of miscarriage. The aim of the study was to assess whether air pollution can affect the length of the overall menstrual cycle and the length of its phases (follicular and luteal). Municipal ecological monitoring data was used to assess the air pollution exposure during the monitored menstrual cycle of each of 133 woman of reproductive age. Principal component analyses were used to group pollutants (PM10, SO2, CO, and NOx) to represent a source-related mixture. PM10 and SO2 assessed separately negatively affected the length of the luteal phase after standardization (b = −0.02; p = 0.03; b = −0.06; p = 0.02, respectively). Representing a fossil fuel combustion emission, they were also associated with luteal phase shortening (b = −0.32; p = 0.02). These pollutants did not affect the follicular phase length and overall cycle length, neither in single- nor in multi-pollutant models. CO and NOx assessed either separately or together as a traffic emission were not associated with overall cycle length or the length of cycle phases. Luteal phase shortening, a possible manifestation of luteal phase deficiency, can result from fossil fuel combustion. This suggests that air pollution may contribute to fertility problems in women. PMID:28726748

BioCycle study: design of the longitudinal study of the oxidative stress and hormone variation during the menstrual cycle

PubMed Central

Wactawski-Wende, Jean; Schisterman, Enrique F.; Hovey, Kathleen M.; Howards, Penelope P.; Browne, Richard W.; Hediger, Mary; Liu, Aiyi; Trevisan, Maurizio

2009-01-01

Summary Studies in both human and animal species have suggested that oxidative stress may be associated with health outcomes, including the risk of infertility in both males and females. Sex hormones have been shown to have antioxidant properties. The difficulty in studying the role of oxidative stress in females is partly due to fluctuation in these endogenous sex hormones across the menstrual cycle. The aim of this study was to determine the association of oxidative stress levels with endogenous reproductive hormone levels and antioxidants, including vitamin levels, across the menstrual cycle in a prospective cohort of premenopausal women. The goal was to enrol 250 healthy, regularly menstruating premenopausal women for two menstrual cycles. Participants visited the clinic up to 8 times per cycle, at which time blood and urine were collected. The visits occurred at key hormonally defined phases of the menstrual cycle, with the help of an algorithm based on cycle length and data from a fertility monitor. In addition, participants were administered standardised questionnaires, had various physical measures taken, and had other pertinent data collected. A total of 259 women were enrolled in this study, with 250 completing two cycles, despite a demanding study protocol which participants were required to follow. This report describes the study design, baseline characteristics and visit completion rate for the BioCycle study. PMID:19159403

Hemispheric Coupling: Comparing Dynamo Simulations and Observations

NASA Astrophysics Data System (ADS)

Norton, A. A.; Charbonneau, P.; Passos, D.

2014-12-01

Numerical simulations that reproduce solar-like magnetic cycles can be used to generate long-term statistics. The variations in north-south hemispheric solar cycle synchronicity and amplitude produced in simulations has not been widely compared to observations. The observed limits on solar cycle amplitude and phase asymmetry show that hemispheric sunspot area production is no more than 20 % asymmetric for cycles 17-23 and that phase lags do not exceed 20 % (or two years) of the total cycle period, as determined from Royal Greenwich Observatory sunspot data. Several independent studies have found a long-term trend in phase values as one hemisphere leads the other for, on average, four cycles. Such persistence in phase is not indicative of a stochastic phenomenon. We compare these observational findings to the magnetic cycle found in a numerical simulation of solar convection recently produced with the EULAG-MHD model. This long "millennium simulation" spans more than 1600 years and generated 40 regular, sunspot-like cycles. While the simulated cycle length is too long (˜40 yrs) and the toroidal bands remain at too high of latitudes (>30°), some solar-like aspects of hemispheric asymmetry are reproduced. The model is successful at reproducing the synchrony of polarity inversions and onset of cycle as the simulated phase lags do not exceed 20 % of the cycle period. The simulated amplitude variations between the north and south hemispheres are larger than those observed in the Sun, some up to 40 %. An interesting note is that the simulations also show that one hemisphere can persistently lead the other for several successive cycles, placing an upper bound on the efficiency of transequatorial magnetic coupling mechanisms. These include magnetic diffusion, cross-equatorial mixing within latitudinally-elongated convective rolls (a.k.a. "banana cells") and transequatorial meridional flow cells. One or more of these processes may lead to magnetic flux cancellation whereby the oppositely directed fields come in close proximity and cancel each other across the magnetic equator late in the solar cycle. We discuss the discrepancies between model and observations and the constraints they pose on possible mechanisms of hemispheric coupling.

Hydro-sedimentary processes of a shallow tropical estuary under Amazon influence. The Mahury Estuary, French Guiana

NASA Astrophysics Data System (ADS)

Orseau, Sylvain; Lesourd, Sandric; Huybrechts, Nicolas; Gardel, Antoine

2017-04-01

Along the Guianas coast, coastal dynamic is characterized by the migration of mud banks originating from the Amazon. This singular feature affects the dynamic and the morphology of local estuaries and can induce rapid bathymetric evolution in lower estuaries. Since 2012, the navigation channel of the Mahury Estuary (French Guiana) is enduring a severe siltation whose origin comes from a mud bank crossing the estuary mouth. This study aims to determine how the migration of a mud bank through an estuary mouth could influence the transport and fluxes in the estuary. Field measurements were performed over a year with the monitoring of the salt intrusion length, mooring surveys during spring-neap cycles and shipboard profiling surveys during semi-diurnal cycles. Salt intrusion lengths underline a significant seasonal variation characterized by the transition from a steady-state length during high river discharge and a wide range of lengths with the tidal range during low to moderate river discharge. During the rainy season, measurements indicate a fluvial-dominated condition with low suspended-sediment concentrations most of the semi-diurnal cycle. Residual sediment fluxes are usually seaward excepted when river discharge is below seasonal average. During the dry season, maximum suspended-sediment concentrations are higher in the middle part of the estuary. Residual sediment fluxes are landward along the estuary and stronger during neap tides in the estuary mouth and few kilometers upstream. In this area, a persistent density stratification traps sediments in the bottom layer and generates a gravitational circulation during neap tides, which enhances landward transports up to 2.56 t m-1 over a semi-diurnal cycle. In the middle estuary, landward fluxes are most significant during the dry season and also during the rainy season when the river discharge is below the seasonal average. Although this study includes temporal and spatial limitations, it underlines significant mud inflows in the middle part of the estuary during low to moderate river discharges. Comparison with old data suggests higher sediment loads in the estuary during the migration of a mud bank but must be confirmed by further studies during the interbank period.

Geographical variation in neonatal phenotype

PubMed Central

Leary, Sam; Fall, Caroline; Osmond, Clive; Lovel, Hermione; Campbell, Doris; Eriksson, Johan; Forrester, Terrence; Godfrey, Keith; Hill, Jacqui; Jie, Mi; Law, Catherine; Newby, Rachel; Robinson, Sian; Yajnik, Chittaranjan

2009-01-01

Background Recent studies have shown associations between size and body proportions at birth and health outcomes throughout the life cycle, but there are few data on how neonatal phenotype varies in different populations around the world. Methods Data from the UK, Finland, India, Sri Lanka, China, DR Congo, Nigeria and Jamaica (N=22 067) were used to characterise geographical differences in phenotype in singleton, liveborn newborns. Measurements included birthweight, placental weight, length, head, chest, abdominal and arm circumferences and skinfolds. Results Neonates in Europe were the largest, followed by Jamaica, East Asia (China), then Africa and South Asia. Birthweight varied widely (mean values 2730g to 3570g), but in contrast, head circumference was similar in all except China (markedly smaller). The main difference in body proportions between populations was the head to length ratio, with small heads relative to length in China and large heads relative to length in South Asia and Africa. Conclusions These marked geographical differences in neonatal phenotype need to be considered when investigating determinants of fetal growth, and optimal phenotype for short-term and long-term outcomes. PMID:16929412

The epsomitic phototrophic microbial mat of Hot Lake, Washington: community structural responses to seasonal cycling

PubMed Central

Lindemann, Stephen R.; Moran, James J.; Stegen, James C.; Renslow, Ryan S.; Hutchison, Janine R.; Cole, Jessica K.; Dohnalkova, Alice C.; Tremblay, Julien; Singh, Kanwar; Malfatti, Stephanie A.; Chen, Feng; Tringe, Susannah G.; Beyenal, Haluk; Fredrickson, James K.

2013-01-01

Phototrophic microbial mats are compact ecosystems composed of highly interactive organisms in which energy and element cycling take place over millimeter-to-centimeter-scale distances. Although microbial mats are common in hypersaline environments, they have not been extensively characterized in systems dominated by divalent ions. Hot Lake is a meromictic, epsomitic lake that occupies a small, endorheic basin in north-central Washington. The lake harbors a benthic, phototrophic mat that assembles each spring, disassembles each fall, and is subject to greater than tenfold variation in salinity (primarily Mg2+ and SO2−4) and irradiation over the annual cycle. We examined spatiotemporal variation in the mat community at five time points throughout the annual cycle with respect to prevailing physicochemical parameters by amplicon sequencing of the V4 region of the 16S rRNA gene coupled to near-full-length 16S RNA clone sequences. The composition of these microbial communities was relatively stable over the seasonal cycle and included dominant populations of Cyanobacteria, primarily a group IV cyanobacterium (Leptolyngbya), and Alphaproteobacteria (specifically, members of Rhodobacteraceae and Geminicoccus). Members of Gammaproteobacteria (e.g., Thioalkalivibrio and Halochromatium) and Deltaproteobacteria (e.g., Desulfofustis) that are likely to be involved in sulfur cycling peaked in summer and declined significantly by mid-fall, mirroring larger trends in mat community richness and evenness. Phylogenetic turnover analysis of abundant phylotypes employing environmental metadata suggests that seasonal shifts in light variability exert a dominant influence on the composition of Hot Lake microbial mat communities. The seasonal development and organization of these structured microbial mats provide opportunities for analysis of the temporal and physical dynamics that feed back to community function. PMID:24312082

The Epsomitic Phototrophic Microbial Mat of Hot Lake, Washington. Community Structural Responses to Seasonal Cycling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lindemann, Stephen R.; Moran, James J.; Stegen, James C.

2013-11-13

Phototrophic microbial mats are compact ecosystems composed of highly interactive organisms in which energy and element cycling take place over millimeter-to-centimeter-scale distances. Although microbial mats are common in hypersaline environments, they have not been extensively characterized in systems dominated by divalent ions. Hot Lake is a meromictic, epsomitic lake that occupies a small, endorheic basin in north-central Washington. The lake harbors a benthic, phototrophic mat that assembles each spring, disassembles each fall, and is subject to greater than tenfold variation in salinity (primarily Mg 2+ and SO 2 -4) and irradiation over the annual cycle. We examined spatiotemporal variation inmore » the mat community at five time points throughout the annual cycle with respect to prevailing physicochemical parameters by amplicon sequencing of the V4 region of the 16S rRNA gene coupled to near-full-length 16S RNA clone sequences. The composition of these microbial communities was relatively stable over the seasonal cycle and included dominant populations of Cyanobacteria, primarily a group IV cyanobacterium (Leptolyngbya), and Alphaproteobacteria (specifically, members of Rhodobacteraceae and Geminicoccus). Members of Gammaproteobacteria (e.g., Thioalkalivibrio and Halochromatium) and Deltaproteobacteria (e.g., Desulfofustis) that are likely to be involved in sulfur cycling peaked in summer and declined significantly by mid-fall, mirroring larger trends in mat community richness and evenness. Phylogenetic turnover analysis of abundant phylotypes employing environmental metadata suggests that seasonal shifts in light variability exert a dominant influence on the composition of Hot Lake microbial mat communities. The seasonal development and organization of these structured microbial mats provide opportunities for analysis of the temporal and physical dynamics that feed back to community function.« less

In Search of Sun-Climate Connection Using Solar Irradiance Measurements and Climate Records

NASA Technical Reports Server (NTRS)

Kiang, Richard K.; Kyle, H. Lee

2000-01-01

The Earth's temperature has risen approximately 0.5 degree-C in the last 150 years. Because the atmospheric concentration of carbon dioxide has increased nearly 30% since the industrial revolution, a common conjecture, supported by various climate models, is that anthropogenic greenhouse gases have contributed to global warming. Another probable factor for the warming is the natural variation of solar irradiance. Although the variation is as small as 0.1 % it is hypothesized that it contributes to part of the temperature rise. Warmer or cooler ocean temperature at one part of the Globe may manifest as abnormally wet or dry weather patterns some months or years later at another part of the globe. Furthermore, the lower atmosphere can be affected through its coupling with the stratosphere, after the stratospheric ozone absorbs the ultraviolet portion of the solar irradiance. In this paper, we use wavelet transforms based on Morlet wavelet to analyze the time-frequency properties in several datasets, including the Radiation Budget measurements, the long-term total solar irradiance time series, the long-term temperature at two locations for the North and the South Hemisphere. The main solar cycle, approximately 11 years, are identified in the long-term total solar irradiance time series. The wavelet transform of the temperature datasets show annual cycle but not the solar cycle. Some correlation is seen between the length of the solar cycle extracted from the wavelet transform and the North Hemisphere temperature time series. The absence of the 11-year cycle in a time series does not necessarily imply that the geophysical parameter is not affected by the solar cycle; rather it simply reflects the complex nature of the Earth's response to climate forcings.

Temporal and Latitudinal Variations of the Length-Scales and Relative Intensities of the Chromospheric Network

NASA Astrophysics Data System (ADS)

Raju, K. P.

2018-05-01

The Calcium K spectroheliograms of the Sun from Kodaikanal have a data span of about 100 years and covers over 9 solar cycles. The Ca line is a strong chromospheric line dominated by chromospheric network and plages which are good indicators of solar activity. Length-scales and relative intensities of the chromospheric network have been obtained in the solar latitudes from 50 degree N to 50 degree S from the spectroheliograms. The length-scale was obtained from the half-width of the two-dimensional autocorrelation of the latitude strip which gives a measure of the width of the network boundary. As reported earlier for the transition region extreme ultraviolet (EUV) network, relative intensity and width of the chromospheric network boundary are found to be dependent on the solar cycle. A varying phase difference has been noticed in the quantities in different solar latitudes. A cross-correlation analysis of the quantities from other latitudes with ±30 degree latitude revealed an interesting phase difference pattern indicating flux transfer. Evidence of equatorward flux transfer has been observed. The average equatorward flux transfer was estimated to be 5.8 ms-1. The possible reasons of the drift could be meridional circulation, torsional oscillations, or the bright point migration. Cross-correlation of intensity and length-scale from the same latitude showed increasing phase difference with increasing latitude. We have also obtained the cross correlation of the quantities across the equator to see the possible phase lags in the two hemispheres. Signatures of lags are seen in the length scales of southern hemisphere near the equatorial latitudes, but no such lags in the intensity are observed. The results have important implications on the flux transfer over the solar surface and hence on the solar activity and dynamo.

Biological variation in two Anopheles vestitipennis populations with different feeding preferences in southern Mexico.

PubMed

Ulloa, Armando; Rodríguez, Mario H; Arredondo-Jimenez, Juan I; Fernandez-Salas, Ildefonso

2005-12-01

The lengths of gonotrophic cycle and egg development and survival rate were studied in Anopheles vestitipennis collected in horse and human-baited traps in southern Mexico. The gonotrophic cycle duration was estimated using cross-correlation analysis, whereas the survival rate was assessed using a vertical method. Daily changes of parity rates gave significant correlation indices at 3 and 4 days in the zoophilic and anthropophilic populations, respectively. The minimum time required to develop mature eggs after blood feeding was 54 and 60 h, and the survival rate was 0.93 and 0.88 in zoophilic and anthropophilic female mosquito populations, respectively. These biological differences provide additional support for the existence of subpopulations with distinctive feeding preferences within An. vestitipennis in southern Mexico.

Length of the solar cycle influence on the relationship NAO-Northern Hemisphere Temperature

NASA Astrophysics Data System (ADS)

de La Torre, L.; Gimeno, L.; Tesouro, M.; Añel, J. A.; Nieto, R.; Ribera, P.; García, R.; Hernández, E.

2003-04-01

The influence of the length of the solar cycle on the relationship North Atlantic Oscillation (NAO)-Northern Hemisphere Temperature (NHT) is investigated. The results suggest that this relationship is different according to the length of the solar cycle. When the sunspot cycle is 10 or 11 years long, wintertime NAO and NHT are positively correlated, being the signal more intense during 11 years period, but when the sunspot cycle is longer (12 years) correlations between wintertime NAO and NHT are not significant. In fact there are significant negative correlations between wintertime NAO and spring NHT, with predictive potential.

Spectroscopic monitoring of SS 433: A search for long-term variations of kinematic model parameters

NASA Astrophysics Data System (ADS)

Davydov, V. V.; Esipov, V. F.; Cherepashchuk, A. M.

2008-06-01

Between 1994 and 2006, we obtained uniform spectroscopic observations of SS 433 in the region of H α. We determined Doppler shifts of the moving emission lines, H α + and H α -, and studied various irregularities in the profiles for the moving emission lines. The total number of Doppler shifts measured in these 13 years is 488 for H α - and 389 for H α +. We have also used published data to study possible long-term variations of the SS 433 system, based on 755 Doppler shifts for H α - and 630 for H α + obtained over 28 years. We have derived improved kinematic model parameters for the precessing relativistic jets of S S 433 using five-and eight-parameter models. On average, the precession period was stable during the 28 years of observations (60 precession cycles), at 162.250d ± 0.003d. Phase jumps of the precession period and random variations of its length with amplitudes of ≈6% and ≈1%, respectively, were observed, but no secular changes in the precession period were detected. The nutation period, P nut = 6.2876d ± 0.00035d, and its phase were stable during 28 years (more than 1600 nutation cycles). We find no secular variations of the nutation cycle. The ejection speed of the relativistic jets, v, was, on average, constant during the 28 years, β = v/c = 0.2561 ± 0.0157. No secular variation of β is detected. In general, S S 433 demonstrates remarkably stable long-term characteristics of its precession and nutation, as well as of the central “engine” near the relativistic object that collimates the plasma in the jets and accelerates it to v = 0.2561 c. Our results support a model with a “slaved” accretion disk in S S 433, which follows the precession of the optical star’s rotation axis.

Predictive modeling and reducing cyclic variability in autoignition engines

DOEpatents

Hellstrom, Erik; Stefanopoulou, Anna; Jiang, Li; Larimore, Jacob

2016-08-30

Methods and systems are provided for controlling a vehicle engine to reduce cycle-to-cycle combustion variation. A predictive model is applied to predict cycle-to-cycle combustion behavior of an engine based on observed engine performance variables. Conditions are identified, based on the predicted cycle-to-cycle combustion behavior, that indicate high cycle-to-cycle combustion variation. Corrective measures are then applied to prevent the predicted high cycle-to-cycle combustion variation.

SU-E-J-219: Quantitative Evaluation of Motion Effects On Accuracy of Image-Guided Radiotherapy with Fiducial Markers Using CT Imaging

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ali, I; Oyewale, S; Ahmad, S

2014-06-01

Purpose: To investigate quantitatively patient motion effects on the localization accuracy of image-guided radiation with fiducial markers using axial CT (ACT), helical CT (HCT) and cone-beam CT (CBCT) using modeling and experimental phantom studies. Methods: Markers with different lengths (2.5 mm, 5 mm, 10 mm, and 20 mm) were inserted in a mobile thorax phantom which was imaged using ACT, HCT and CBCT. The phantom moved with sinusoidal motion with amplitudes ranging 0–20 mm and a frequency of 15 cycles-per-minute. Three parameters that include: apparent marker lengths, center position and distance between the centers of the markers were measured inmore » the different CT images of the mobile phantom. A motion mathematical model was derived to predict the variations in the previous three parameters and their dependence on the motion in the different imaging modalities. Results: In CBCT, the measured marker lengths increased linearly with increase in motion amplitude. For example, the apparent length of the 10 mm marker was about 20 mm when phantom moved with amplitude of 5 mm. Although the markers have elongated, the center position and the distance between markers remained at the same position for different motion amplitudes in CBCT. These parameters were not affected by motion frequency and phase in CBCT. In HCT and ACT, the measured marker length, center and distance between markers varied irregularly with motion parameters. The apparent lengths of the markers varied with inverse of the phantom velocity which depends on motion frequency and phase. Similarly the center position and distance between markers varied inversely with phantom speed. Conclusion: Motion may lead to variations in maker length, center position and distance between markers using CT imaging. These effects should be considered in patient setup using image-guided radiation therapy based on fiducial markers matching using 2D-radiographs or volumetric CT imaging.« less

Uterine length and fertility outcomes: a cohort study in the IVF population.

PubMed

Hawkins, L K; Correia, K F; Srouji, S S; Hornstein, M D; Missmer, S A

2013-11-01

What is the relationship between pre-cycle uterine length and IVF outcome (chemical pregnancy, clinical pregnancy, spontaneous abortion and live birth)? Women at extremes of uterine length (<7.0 or >9.0 cm) were less likely to achieve live birth and women with uterine lengths <6.0 cm were also more likely to experience spontaneous abortion. A prospective study of 807 women published in 2000 found that implantation and clinical pregnancy rates were highest in women with uterine lengths between 7.0 and 9.0 cm, though the difference was not significant. The relationship between pre-cycle uterine length and live birth has not been evaluated. A retrospective cohort study of all cycles performed after uterine length measurement at an academic hospital IVF clinic from 2001 to 2012. A total of 8981 fresh cycles were performed in 5120 adult women with normal uterine anatomy. Women with uterine anomalies (unicornuate, bicornuate, septate or uterus exposed to diethylstilbestrol) were excluded and women with fibroids were identified for subanalysis. Uterine length was measured by uterine sounding. Cycles were divided by uterine length into groups: <6.0 cm (very short, n = 76), 6.0-6.9 cm (short, n = 2014), 7.0-7.9 cm (referent, n = 4984), 8.0-8.9 cm (long, n = 1664) and ≥9 cm (very long, n = 243). Multivariate logistic regression (first-cycle analyses) and generalized estimating equations (all-cycle analyses) were adjusted for age, fibroids and ART treatment (assisted hatching, intracytoplasmic sperm injection) to generate relative risk (RR) of cycle outcomes by uterine length. Median uterine length in the IVF population was 7.0 cm (interquartile range 7.0-7.8) and was positively associated with BMI (P < 0.001) and fibroids (P = 0.02). Compared with the referent group, women with uterine lengths <6.0 cm were half as likely to achieve live birth (RR: 0.53; 95% confidence interval (CI): 0.35-0.81) and women with lengths of 6.0-6.9 cm were also less likely (RR: 0.91; CI: 0.85-0.98). Cubic regression spline identified a significant inverse U-shaped association whereby women with uterine lengths <7.0 or >9.0 cm were less likely to achieve live birth. Women with lengths <6.0 cm were also more likely to experience spontaneous abortion (RR: 2.16; CI: 1.23-3.78). Results remained consistent when excluding women with a uterine factor diagnosis (n = 8823), when limiting to the first cycle at our institution (n = 5120) and when further restricting to first-ever cycles (n = 3941). Optimal assessment of uterine length by ultrasound was not feasible due to time and cost limitations, though uterine sounding is a clinically relevant measurement allowing for results with practical implications. Findings from our predominantly Caucasian clinic population may not be generalizable to infertile populations with different ethnic compositions. Reproducibility of results would solidify findings and inform patient counseling in women undergoing IVF. No funding was sought for this investigation. MD declares relationships with UpToDate (royalties) and WINFertlity (consultant).

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length

PubMed Central

Cook, Daniel E.; Zdraljevic, Stefan; Tanny, Robyn E.; Seo, Beomseok; Riccardi, David D.; Noble, Luke M.; Rockman, Matthew V.; Alkema, Mark J.; Braendle, Christian; Kammenga, Jan E.; Wang, John; Kruglyak, Leonid; Félix, Marie-Anne; Lee, Junho; Andersen, Erik C.

2016-01-01

Telomeres are involved in the maintenance of chromosomes and the prevention of genome instability. Despite this central importance, significant variation in telomere length has been observed in a variety of organisms. The genetic determinants of telomere-length variation and their effects on organismal fitness are largely unexplored. Here, we describe natural variation in telomere length across the Caenorhabditis elegans species. We identify a large-effect variant that contributes to differences in telomere length. The variant alters the conserved oligonucleotide/oligosaccharide-binding fold of protection of telomeres 2 (POT-2), a homolog of a human telomere-capping shelterin complex subunit. Mutations within this domain likely reduce the ability of POT-2 to bind telomeric DNA, thereby increasing telomere length. We find that telomere-length variation does not correlate with offspring production or longevity in C. elegans wild isolates, suggesting that naturally long telomeres play a limited role in modifying fitness phenotypes in C. elegans. PMID:27449056

Timing the start of division in E. coli: a single-cell study

NASA Astrophysics Data System (ADS)

Reshes, G.; Vanounou, S.; Fishov, I.; Feingold, M.

2008-12-01

We monitor the shape dynamics of individual E. coli cells using time-lapse microscopy together with accurate image analysis. This allows measuring the dynamics of single-cell parameters throughout the cell cycle. In previous work, we have used this approach to characterize the main features of single-cell morphogenesis between successive divisions. Here, we focus on the behavior of the parameters that are related to cell division and study their variation over a population of 30 cells. In particular, we show that the single-cell data for the constriction width dynamics collapse onto a unique curve following appropriate rescaling of the corresponding variables. This suggests the presence of an underlying time scale that determines the rate at which the cell cycle advances in each individual cell. For the case of cell length dynamics a similar rescaling of variables emphasizes the presence of a breakpoint in the growth rate at the time when division starts, τc. We also find that the τc of individual cells is correlated with their generation time, τg, and inversely correlated with the corresponding length at birth, L0. Moreover, the extent of the T-period, τg - τc, is apparently independent of τg. The relations between τc, τg and L0 indicate possible compensation mechanisms that maintain cell length variability at about 10%. Similar behavior was observed for both fast-growing cells in a rich medium (LB) and for slower growth in a minimal medium (M9-glucose). To reveal the molecular mechanisms that lead to the observed organization of the cell cycle, we should further extend our approach to monitor the formation of the divisome.

Analysis of Co-spatial UV-Optical STIS Spectra of Planetary Nebulae From HST Cycle 19 GO 12600

NASA Astrophysics Data System (ADS)

Miller, Timothy R.; Henry, Richard B. C.; Dufour, Reginald J.; Kwitter, Karen B.; Shaw, Richard A.; Balick, Bruce; Corradi, Romano

2015-01-01

We present an analysis of five spatially resolved planetary nebulae (PNe), NGC 5315, NGC 5882, NGC 7662, IC 2165, and IC 3568, from observations in the Cycle 19 program GO 12600 using HST STIS. Details of the observations and data are presented in the poster by Dufour et al. in this session. These five observations cover the wavelength range 1150-10,270 Å with 0.2 and 0.5 arcsec wide slits, and are co-spatial to 0.1 arcsec along a 25 arcsec length across each nebula. This unprecedented resolution in both wavelength and spatial coverage enabled detailed studies of physical conditions and abundances from UV line ion emissions (compared to optical lines). We first analyzed the low- and moderate-resolution UV emission lines of carbon using the resolved lines of C III] 1906.68 and 1908.73, which yielded a direct measurement of the density within the volume occupied by doubly-ionized carbon and other similar co-spatial ions. Next, each PN spectrum was divided into spatial sub-regions in order to assess inferred density variations among the sub-regions along the entire slit. Variations in electron temperature and chemical abundances were also probed. Lastly, these nebulae were modeled in detail with the photoionization code CLOUDY. This modeling tested different density profiles in order to reproduce the observed density variations and temperature fluctuations, and constrain central star parameters. We gratefully acknowledge generous support from NASA through grants related to the Cycle 19 program GO 12600, as well as from the University of Oklahoma.

Accreditation status of U.S. military graduate medical education programs.

PubMed

De Lorenzo, Robert A

2008-07-01

Military graduate medical education (GME) comprises a substantial fraction of U.S. physician training capacity. The wars in Iraq and Afghanistan have placed substantial stress on military medicine, and lay and professional press accounts have raised awareness of the effects on military GME. To date, however, objective data on military GME quality remains sparse. Determine the accreditation status of U.S. military GME programs. Additionally, military GME program data will be compared to national (U.S.) accreditation lengths. Retrospective review of Accreditation Council for Graduate Medical Education (ACGME) data. All military-sponsored core programs in specialties with at least three residencies were included. Military-affiliated but civilian-sponsored programs were excluded. The current and past cycle data were used for the study. For each specialty, the current mean accreditation length and the net change in cycle was calculated. National mean accreditation lengths by specialty for 2005 to 2006 were obtained from the ACGME. Comparison between the overall mean national and military accreditation lengths was performed with a z test. All other comparisons employed descriptive statistics. Ninety-nine military programs in 15 specialties were included in the analysis. During the study period, 1 program was newly accredited, and 6 programs had accreditation withdrawn or were closed. The mean accreditation length of the military programs was 4.0 years. The overall national mean for the same specialties is 3.5 years (p < 0.01). In previous cycles, 68% of programs had accreditation of 4 years or longer, compared to 70% in the current cycle, while 13% had accreditation of 2 years or less in the previous cycle compared to 14% in the current cycle. Ten (68%) of the military specialties had mean accreditation lengths greater than the national average, while 5 (33%) were below it. Ten (68%) specialties had stable or improving cycle lengths when compared to previous cycles. Military GME accreditation cycle lengths are, overall, longer than national averages. Trends show many military programs are experiencing either stable or slightly lengthening accreditation compared to previous cycles. A few specialties show a declining trend. There has been a modest 5% decline in the number of military core residency programs since 2000.

33 CFR 157.138 - Crude Oil Washing Operations and Equipment Manual.

Code of Federal Regulations, 2011 CFR

2011-07-01

...) Revolutions, number of cycles, and length of cycles of each COW machine. (iii) Pressure and flow of the... COW machines. (ii) Revolutions, number of cycles, and length of cycles of each COW machine. (iii... § 157.140. (10) The volume of water used for water rinsing recorded during COW operations when passing...

33 CFR 157.138 - Crude Oil Washing Operations and Equipment Manual.

Code of Federal Regulations, 2013 CFR

2013-07-01

...) Revolutions, number of cycles, and length of cycles of each COW machine. (iii) Pressure and flow of the... COW machines. (ii) Revolutions, number of cycles, and length of cycles of each COW machine. (iii... § 157.140. (10) The volume of water used for water rinsing recorded during COW operations when passing...

33 CFR 157.138 - Crude Oil Washing Operations and Equipment Manual.

Code of Federal Regulations, 2014 CFR

2014-07-01

...) Revolutions, number of cycles, and length of cycles of each COW machine. (iii) Pressure and flow of the... COW machines. (ii) Revolutions, number of cycles, and length of cycles of each COW machine. (iii... § 157.140. (10) The volume of water used for water rinsing recorded during COW operations when passing...

Properties of sunspot cycles and hemispheric wings since the 19th century

NASA Astrophysics Data System (ADS)

Leussu, Raisa; Usoskin, Ilya G.; Arlt, Rainer; Mursula, Kalevi

2016-08-01

Aims: The latitudinal evolution of sunspot emergence over the course of the solar cycle, the so-called butterfly diagram, is a fundamental property of the solar dynamo. Here we present a study of the butterfly diagram of sunspot group occurrence for cycles 7-10 and 11-23 using data from a recently digitized sunspot drawings by Samuel Heinrich Schwabe in 1825-1867, and from RGO/USAF/NOAA(SOON) compilation of sunspot groups in 1874-2015. Methods: We developed a new, robust method of hemispheric wing separation based on an analysis of long gaps in sunspot group occurrence in different latitude bands. The method makes it possible to ascribe each sunspot group to a certain wing (solar cycle and hemisphere), and separate the old and new cycle during their overlap. This allows for an improved study of solar cycles compared to the common way of separating the cycles. Results: We separated each hemispheric wing of the butterfly diagram and analysed them with respect to the number of groups appearing in each wing, their lengths, hemispheric differences, and overlaps. Conclusions: The overlaps of successive wings were found to be systematically longer in the northern hemisphere for cycles 7-10, but in the southern hemisphere for cycles 16-22. The occurrence of sunspot groups depicts a systematic long-term variation between the two hemispheres. During Schwabe time, the hemispheric asymmetry was north-dominated during cycle 9 and south-dominated during cycle 10.

Realizing the Translational Potential of Telomere Length Variation as a Tissue-Based Prognostic Marker for Prostate Cancer

DTIC Science & Technology

2014-10-01

Telomere Length Variation as a Tissue- Based Prognostic Marker for Prostate Cancer PRINCIPAL INVESTIGATOR: Elizabeth A. Platz CONTRACTING...Translational Potential of Telomere Length Variation as a Tissue- Based Prognostic Marker for Prostate Cancer 5b. GRANT NUMBER W81XWH-12-1-0545 5c...combination of telomere length variability in prostate cancer cells and short telomere length in cancer-associated stromal cells is an independent

The effect of ultradian and orbital cycles on plant growth

NASA Technical Reports Server (NTRS)

Berry, W.; Hoshizaki, T.; Ulrich, A.

1986-01-01

In a series of experiments using sugar beets, researchers investigated the effects of varying cycles lengths on growth (0.37 hr to 48 hr). Each cycle was equally divided into a light and dark period so that each treatment regardless of cycle length received the same amount of light over the 17 weeks of the experiment. Two growth parameters were used to evaluate the effects of cycle length, total fresh weight and sucrose content of the storage root. Both parameters showed very similar responses in that under long cycles (12 hr or greater) growth was normal, whereas plants growing under shorter cycle periods were progressively inhibited. Minimum growth occurred at a cycle period of 0.75 hr. The yield at the 0.75 hr cycle, where was at a minimum, for total fresh weight was only 51 percent compared to the 24 hr cycle. The yield of sucrose was even more reduced at 41 percent of the 24 hr cycle.

Life cycle environmental implications of residential swimming pools.

PubMed

Forrest, Nigel; Williams, Eric

2010-07-15

Ownership of private swimming pools in the U.S. grew 2 to 4% per annum from 1997 to 2007. The environmental implications of pool ownership are analyzed by hybrid life cycle assessment (LCA) for nine U.S. cities. An operational model is constructed estimating consumption of chemicals, water, and energy for a typical residential pool. The model incorporates geographical climatic variations and upstream water and energy use from electricity and water supply networks. Results vary considerably by city: a factor of 5-6 for both water and energy use. Water use is driven by aridness and length of the swimming season, while energy use is mainly driven by length of the swimming season. Water and energy impacts of pools are significant, particularly in arid climates. In Phoenix for example pools account for 22% and 13% of a household's electricity and water use, respectively. Measures to reduce water and energy use in pools such as optimizing the pump schedule and covering the pool in winter can realize greater savings than many common household efficiency improvements. Private versus community pools are also compared. Community pools in Phoenix use 60% less swimming pool water and energy per household than subdivisions without community pools.

Menstrual function among women exposed to polybrominated biphenyls: A follow-up prevalence study

PubMed Central

Davis, Stephanie I; Blanck, Heidi Michels; Hertzberg, Vicki S; Tolbert, Paige E; Rubin, Carol; Cameron, Lorraine L; Henderson, Alden K; Marcus, Michele

2005-01-01

Background Alteration in menstrual cycle function is suggested among rhesus monkeys and humans exposed to polybrominated biphenyls (PBBs) and structurally similar polychlorinated biphenyls (PCBs). The feedback system for menstrual cycle function potentially allows multiple pathways for disruption directly through the hypothalamic-pituitary-ovarian axis and indirectly through alternative neuroendocrine axes. Methods The Michigan Female Health Study was conducted during 1997–1998 among women in a cohort exposed to PBBs in 1973. This study included 337 women with self-reported menstrual cycles of 20–35 days (age range: 24–56 years). Current PBB levels were estimated by exponential decay modeling of serum PBB levels collected from 1976–1987 during enrollment in the Michigan PBB cohort. Linear regression models for menstrual cycle length and the logarithm of bleed length used estimated current PBB exposure or enrollment PBB exposure categorized in tertiles, and for the upper decile. All models were adjusted for serum PCB levels, age, body mass index, history of at least 10% weight loss in the past year, physical activity, smoking, education, and household income. Results Higher levels of physical activity were associated with shorter bleed length, and increasing age was associated with shorter cycle length. Although no overall association was found between PBB exposure and menstrual cycle characteristics, a significant interaction between PBB exposures with past year weight loss was found. Longer bleed length and shorter cycle length were associated with higher PBB exposure among women with past year weight loss. Conclusion This study suggests that PBB exposure may impact ovarian function as indicated by menstrual cycle length and bleed length. However, these associations were found among the small number of women with recent weight loss suggesting either a chance finding or that mobilization of PBBs from lipid stores may be important. These results should be replicated with larger numbers of women exposed to similar lipophilic compounds. PMID:16091135

Assimilation of total lightning data using the three-dimensional variational method at convection-allowing resolution

NASA Astrophysics Data System (ADS)

Zhang, Rong; Zhang, Yijun; Xu, Liangtao; Zheng, Dong; Yao, Wen

2017-08-01

A large number of observational analyses have shown that lightning data can be used to indicate areas of deep convection. It is important to assimilate observed lightning data into numerical models, so that more small-scale information can be incorporated to improve the quality of the initial condition and the subsequent forecasts. In this study, the empirical relationship between flash rate, water vapor mixing ratio, and graupel mixing ratio was used to adjust the model relative humidity, which was then assimilated by using the three-dimensional variational data assimilation system of the Weather Research and Forecasting model in cycling mode at 10-min intervals. To find the appropriate assimilation time-window length that yielded significant improvement in both the initial conditions and subsequent forecasts, four experiments with different assimilation time-window lengths were conducted for a squall line case that occurred on 10 July 2007 in North China. It was found that 60 min was the appropriate assimilation time-window length for this case, and longer assimilation window length was unnecessary since no further improvement was present. Forecasts of 1-h accumulated precipitation during the assimilation period and the subsequent 3-h accumulated precipitation were significantly improved compared with the control experiment without lightning data assimilation. The simulated reflectivity was optimal after 30 min of the forecast, it remained optimal during the following 42 min, and the positive effect from lightning data assimilation began to diminish after 72 min of the forecast. Overall, the improvement from lightning data assimilation can be maintained for about 3 h.

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length.

PubMed

Cook, Daniel E; Zdraljevic, Stefan; Tanny, Robyn E; Seo, Beomseok; Riccardi, David D; Noble, Luke M; Rockman, Matthew V; Alkema, Mark J; Braendle, Christian; Kammenga, Jan E; Wang, John; Kruglyak, Leonid; Félix, Marie-Anne; Lee, Junho; Andersen, Erik C

2016-09-01

Telomeres are involved in the maintenance of chromosomes and the prevention of genome instability. Despite this central importance, significant variation in telomere length has been observed in a variety of organisms. The genetic determinants of telomere-length variation and their effects on organismal fitness are largely unexplored. Here, we describe natural variation in telomere length across the Caenorhabditis elegans species. We identify a large-effect variant that contributes to differences in telomere length. The variant alters the conserved oligonucleotide/oligosaccharide-binding fold of protection of telomeres 2 (POT-2), a homolog of a human telomere-capping shelterin complex subunit. Mutations within this domain likely reduce the ability of POT-2 to bind telomeric DNA, thereby increasing telomere length. We find that telomere-length variation does not correlate with offspring production or longevity in C. elegans wild isolates, suggesting that naturally long telomeres play a limited role in modifying fitness phenotypes in C. elegans. Copyright © 2016 by the Genetics Society of America.

Geophysical, archaeological and historical evidence support a solar-output model for climate change

USGS Publications Warehouse

Perry, C.A.; Hsu, K.J.

2000-01-01

Although the processes of climate change are not completely understood, an important causal candidate is variation in total solar output. Reported cycles in various climate-proxy data show a tendency to emulate a fundamental harmonic sequence of a basic solar-cycle length (11 years) multiplied by 2(N) (where N equals a positive or negative integer). A simple additive model for total solar-output variations was developed by superimposing a progression of fundamental harmonic cycles with slightly increasing amplitudes. The timeline of the model was calibrated to the Pleistocene/Holocene boundary at 9,000 years before present. The calibrated model was compared with geophysical, archaeological, and historical evidence of warm or cold climates during the Holocene. The evidence of periods of several centuries of cooler climates worldwide called 'little ice ages,' similar to the period anno Domini (A.D.) 1280-1860 and reoccurring approximately every 1,300 years, corresponds well with fluctuations in modeled solar output. A more detailed examination of the climate sensitive history of the last 1,000 years further supports the model. Extrapolation of the model into the future suggests a gradual cooling during the next few centuries with intermittent minor warmups and a return to near little-ice-age conditions within the next 500 years. This cool period then may be followed approximately 1,500 years from now by a return to altithermal conditions similar to the previous Holocene Maximum.

Host selection and gonotrophic cycle length of Anopheles punctimacula in southern Mexico.

PubMed

Ulloa, Armando; Gonzalez-Cerón, Lilia; Rodríguez, Mario H

2006-12-01

The host preference, survival rates, and length of the gonotrophic cycle of Anopheles punctimacula was investigated in southern México. Mosquitoes were collected in 15-day separate experiments during the rainy and dry seasons. Daily changes in the parous-nulliparous ratio were recorded and the gonotrophic cycle length was estimated by a time series analysis. Anopheles punctimacula was most abundant during the dry season and preferred animals to humans. The daily survival rate in mosquitoes collected in animal traps was 0.96 (parity rate = 0.86; gonotrophic cycle = 4 days). The length of gonotrophic cycle of 4 days was estimated on the base of a high correlation coefficient value appearing every 4 days. The minimum time estimated for developing mature eggs after blood feeding was 72 h. The proportion of mosquitoes living enough to transmit Plasmodium vivax malaria during the dry season was 0.35.

Realizing the Translational Potential of Telomere Length Variation as a Tissue Based Prognostic Marker for Prostate Cancer

DTIC Science & Technology

2016-10-01

Award Number: W81XWH-12-1-0545 TITLE: Realizing the Translational Potential of Telomere Length Variation as a Tissue- Based Prognostic Marker for...30 Sep 2015 - 29 Sep 2016 4. TITLE AND SUBTITLE 5a. CONTRACT NUMBER Realizing the Translational Potential of Telomere Length Variation as a Tissue...HPFS), whether the combination of telomere length variability in prostate cancer cells and short telomere length in cancer-associated stromal cells is

Increasing serum 25-hydroxyvitamin D (25(OH)D) is associated with reduced odds of long menstrual cycles in a cross-sectional study of African-American women

PubMed Central

Upson, Kristen; Harmon, Quaker E.; Baird, Donna D.

2016-01-01

Objective To examine the association between serum 25-hydroxyvitamin D (25(OH)D) and menstrual cycle length and regularity. Design Community-based, cross-sectional study of serum 25(OH)D (adjusted for seasonal differences in timing of blood draw) and menstrual cycle length. Women ages 23-34 reported their gynecologic history. Menstrual cycles were described with four independent categories (normal, short, long, irregular). We used polytomous logistic regression to estimate the association between a doubling of seasonally-adjusted 25(OH)D and the odds of each cycle category. Setting Women from the Detroit, Michigan area attended a study clinic visit. Participants 1102 African-American women ages 23-34. Intervention None Main Outcome Measure Self-reported menstrual cycle length over the previous 12 months excluding women who were using cycle-regulating medications over the entire year. Women who reported that their cycles were “too irregular to estimate” were classified as having irregular cycles. A typical cycle length of <27 days was considered “short,” >34 days was “long,” and 27-34 days was “normal”. Results The median 25(OH)D level was 14.7 ng/ml (interquartile range: 10.9, 19.6). A doubling of 25(OH)D was associated with half the odds of having long menstrual cycles (adjusted odds ratio (aOR) (95% Confidence interval (CI): 0.54 (0.32, 0.89)). 25(OH)D was not associated with the occurrence of short (aOR(CI): 1.03 (0.82, 1.29)) or irregular (aOR(CI): 1.46 (0.88, 2.41) menstrual cycles. Results were robust to several sensitivity analyses. Conclusions These findings suggest that vitamin D status may influence the menstrual cycle and play a role in ovarian function. Further investigation of 25(OH)D and ovarian hormones, and prospective studies of 25(OH)D and cycle length, are needed. PMID:26997249

Increasing serum 25-hydroxyvitamin D is associated with reduced odds of long menstrual cycles in a cross-sectional study of African American women.

PubMed

Jukic, Anne Marie Z; Upson, Kristen; Harmon, Quaker E; Baird, Donna D

2016-07-01

To examine the association between serum 25-hydroxyvitamin D [25(OH)D] and menstrual cycle length and regularity. Community-based, cross-sectional study of serum 25(OH)D (adjusted for seasonal differences in timing of blood draw) and menstrual cycle length. Women aged 23-34 years reported their gynecologic history. Menstrual cycles were described with four independent categories (normal, short, long, irregular). We used polytomous logistic regression to estimate the association between a doubling of seasonally adjusted 25(OH)D and the odds of each cycle category. Not applicable. A total of 1,102 African American women. Not applicable. Self-reported menstrual cycle length over the previous 12 months, excluding women who were using cycle-regulating medications over the entire year. Women who reported that their cycles were "too irregular to estimate" were classified as having irregular cycles. A typical cycle length of <27 days was considered "short," >34 days was "long," and 27-34 days was "normal." The median 25(OH)D level was 14.7 ng/mL (interquartile range, 10.9-19.6 ng/mL). A doubling of 25(OH)D was associated with half the odds of having long menstrual cycles: adjusted odds ratio (aOR) 0.54, 95% confidence interval (CI) 0.32-0.89. 25-Hydroxyvitamin D was not associated with the occurrence of short (aOR 1.03, 95% CI 0.82-1.29) or irregular (aOR 1.46, 95% CI 0.88-2.41) menstrual cycles. Results were robust to several sensitivity analyses. These findings suggest that vitamin D status may influence the menstrual cycle and play a role in ovarian function. Further investigation of 25(OH)D and ovarian hormones, and prospective studies of 25(OH)D and cycle length, are needed. Copyright © 2016 American Society for Reproductive Medicine. All rights reserved.

Genetic architecture of the circadian clock and flowering time in Brassica rapa.

PubMed

Lou, P; Xie, Q; Xu, X; Edwards, C E; Brock, M T; Weinig, C; McClung, C R

2011-08-01

The circadian clock serves to coordinate physiology and behavior with the diurnal cycles derived from the daily rotation of the earth. In plants, circadian rhythms contribute to growth and yield and, hence, to both agricultural productivity and evolutionary fitness. Arabidopsis thaliana has served as a tractable model species in which to dissect clock mechanism and function, but it now becomes important to define the extent to which the Arabidopsis model can be extrapolated to other species, including crops. Accordingly, we have extended our studies to the close Arabidopsis relative and crop species, Brassica rapa. We have investigated natural variation in circadian function and flowering time among multiple B. rapa collections. There is wide variation in clock function, based on a robust rhythm in cotyledon movement, within a collection of B. rapa accessions, wild populations and recombinant inbred lines (RILs) derived from a cross between parents from two distinct subspecies, a rapid cycling Chinese cabbage (ssp. pekinensis) and a Yellow Sarson oilseed (ssp. trilocularis). We further analyzed the RILs to identify the quantitative trait loci (QTL) responsible for this natural variation in clock period and temperature compensation, as well as for flowering time under different temperature and day length settings. Most clock and flowering-time QTL mapped to overlapping chromosomal loci. We have exploited micro-synteny between the Arabidopsis and B. rapa genomes to identify candidate genes for these QTL.

Seasonal variations in red deer (Cervus elaphus) hematology related to antler growth and biometrics measurements.

PubMed

Gaspar-López, Enrique; Landete-Castillejos, Tomás; Estevez, Jose Antonio; Ceacero, Francisco; Gallego, Laureano; García, Andrés Jose

2011-04-01

The aim of the study was to relate seasonal hematology changes with the rest of physiological variations suffered by red deer, such as antler and biometrics cycle, and to assess the relationship between hematology and the effort performed in antler development. Blood samples were taken from 21 male red deer every 4 weeks during 18 months. Samples were analyzed for the main hematological parameters. Simultaneously, biometrics measurements were taken, such as antler length, body weight, body condition score, testicular diameter (TD), and thoracic and neck girth. All the blood cell types (erythrocytes, leukocytes, and platelets) showed seasonal variations, increasing as antler cleaning approached, as did hematocrit and hemoglobin. The final size of antlers was negatively related to leukocyte count, nonlymphoid leukocyte count, red cell distribution width, mean corpuscular hemoglobin, mean platelet volume, and TD, whereas it was positively related to body condition during antler growth. Huge seasonal variations in some hematological values have been found to be related to changes in antler and biometrics measurements. Since these variations are even greater than the caused by deer handling, they should be taken into account when evaluating hematology in deer populations. Copyright © 2011 Wiley-Liss, Inc., A Wiley Company.

Thick lens chromatic effective focal length variation versus bending

NASA Astrophysics Data System (ADS)

Sparrold, Scott

2017-11-01

Longitudinal chromatic aberration (LCA) can limit the optical performance in refractive optical systems. Understanding a singlet's chromatic change of effective focal leads to insights and methods to control LCA. Long established, first order theory, shows the chromatic change in focal length for a zero thickness lens is proportional to it's focal length divided by the lens V number or inverse dispersion. This work presents the derivation of an equation for a thick singlet's chromatic change in effective focal length as a function of center thickness, t, dispersion, V, index of refraction, n, and the Coddington shape factor, K. A plot of bending versus chromatic focal length variation is presented. Lens thickness does not influence chromatic variation of effective focal length for a convex plano or plano convex lens. A lens's center thickness'influence on chromatic focal length variation is more pronounced for lower indices of refraction.

Parameter and prediction uncertainty in an optimized terrestrial carbon cycle model: Effects of constraining variables and data record length

NASA Astrophysics Data System (ADS)

Ricciuto, Daniel M.; King, Anthony W.; Dragoni, D.; Post, Wilfred M.

2011-03-01

Many parameters in terrestrial biogeochemical models are inherently uncertain, leading to uncertainty in predictions of key carbon cycle variables. At observation sites, this uncertainty can be quantified by applying model-data fusion techniques to estimate model parameters using eddy covariance observations and associated biometric data sets as constraints. Uncertainty is reduced as data records become longer and different types of observations are added. We estimate parametric and associated predictive uncertainty at the Morgan Monroe State Forest in Indiana, USA. Parameters in the Local Terrestrial Ecosystem Carbon (LoTEC) are estimated using both synthetic and actual constraints. These model parameters and uncertainties are then used to make predictions of carbon flux for up to 20 years. We find a strong dependence of both parametric and prediction uncertainty on the length of the data record used in the model-data fusion. In this model framework, this dependence is strongly reduced as the data record length increases beyond 5 years. If synthetic initial biomass pool constraints with realistic uncertainties are included in the model-data fusion, prediction uncertainty is reduced by more than 25% when constraining flux records are less than 3 years. If synthetic annual aboveground woody biomass increment constraints are also included, uncertainty is similarly reduced by an additional 25%. When actual observed eddy covariance data are used as constraints, there is still a strong dependence of parameter and prediction uncertainty on data record length, but the results are harder to interpret because of the inability of LoTEC to reproduce observed interannual variations and the confounding effects of model structural error.

Temporal variation in pelagic food chain length in response to environmental change

PubMed Central

Ruiz-Cooley, Rocio I.; Gerrodette, Tim; Fiedler, Paul C.; Chivers, Susan J.; Danil, Kerri; Ballance, Lisa T.

2017-01-01

Climate variability alters nitrogen cycling, primary productivity, and dissolved oxygen concentration in marine ecosystems. We examined the role of this variability (as measured by six variables) on food chain length (FCL) in the California Current (CC) by reconstructing a time series of amino acid–specific δ15N values derived from common dolphins, an apex pelagic predator, and using two FCL proxies. Strong declines in FCL were observed after the 1997–1999 El Niño Southern Oscillation (ENSO) event. Bayesian models revealed longer FCLs under intermediate conditions for surface temperature, chlorophyll concentration, multivariate ENSO index, and total plankton volume but not for hypoxic depth and nitrate concentration. Our results challenge the prevalent paradigm that suggested long-term stability in the food web structure in the CC and, instead, reveal that pelagic food webs respond strongly to disturbances associated with ENSO events, local oceanography, and ongoing changes in climate. PMID:29057322

Influence of crank length and crank width on maximal hand cycling power and cadence.

PubMed

Krämer, Christian; Hilker, Lutz; Böhm, Harald

2009-07-01

The effect of different crank lengths and crank widths on maximal hand cycling power, cadence and handle speed were determined. Crank lengths and crank widths were adapted to anthropometric data of the participants as the ratio to forward reach (FR) and shoulder breadth (SB), respectively. 25 able-bodied subjects performed maximal inertial load hand cycle ergometry using crank lengths of 19, 22.5 and 26% of FR and 72, 85 and 98% of SB. Maximum power ranged from 754 (246) W for the crank geometry short wide (crank length x crank width) to 873 (293) W for the combination long middle. Every crank length differed significantly (P < 0.05) from each other, whereas no significant effect of crank width to maximum power output was revealed. Optimal cadence decreased significantly (P < 0.001) with increasing crank length from 124.8 (0.9) rpm for the short to 107.5 (1.6) rpm for the long cranks, whereas optimal handle speed increased significantly (P < 0.001) with increasing crank length from 1.81 (0.01) m/s for the short to 2.13 (0.03) m/s for the long cranks. Crank width did neither influence optimal cadence nor optimal handle speed significantly. From the results of this study, for maximum hand cycling power, a crank length to FR ratio of 26% for a crank width to SB ratio of 85% is recommended.

Effect of temperature and cycle length on microbial competition in PHB-producing sequencing batch reactor.

PubMed

Jiang, Yang; Marang, Leonie; Kleerebezem, Robbert; Muyzer, Gerard; van Loosdrecht, Mark C M

2011-05-01

The impact of temperature and cycle length on microbial competition between polyhydroxybutyrate (PHB)-producing populations enriched in feast-famine sequencing batch reactors (SBRs) was investigated at temperatures of 20 °C and 30 °C, and in a cycle length range of 1-18 h. In this study, the microbial community structure of the PHB-producing enrichments was found to be strongly dependent on temperature, but not on cycle length. Zoogloea and Plasticicumulans acidivorans dominated the SBRs operated at 20 °C and 30 °C, respectively. Both enrichments accumulated PHB more than 75% of cell dry weight. Short-term temperature change experiments revealed that P. acidivorans was more temperature sensitive as compared with Zoogloea. This is particularly true for the PHB degradation, resulting in incomplete PHB degradation in P. acidivorans at 20 °C. Incomplete PHB degradation limited biomass growth and allowed Zoogloea to outcompete P. acidivorans. The PHB content at the end of the feast phase correlated well with the cycle length at a constant solid retention time (SRT). These results suggest that to establish enrichment with the capacity to store a high fraction of PHB, the number of cycles per SRT should be minimized independent of the temperature.

Earthquake cycle modeling of multi-segmented faults: dynamic rupture and ground motion simulation of the 1992 Mw 7.3 Landers earthquake.

NASA Astrophysics Data System (ADS)

Petukhin, A.; Galvez, P.; Somerville, P.; Ampuero, J. P.

2017-12-01

We perform earthquake cycle simulations to study the characteristics of source scaling relations and strong ground motions and in multi-segmented fault ruptures. For earthquake cycle modeling, a quasi-dynamic solver (QDYN, Luo et al, 2016) is used to nucleate events and the fully dynamic solver (SPECFEM3D, Galvez et al., 2014, 2016) is used to simulate earthquake ruptures. The Mw 7.3 Landers earthquake has been chosen as a target earthquake to validate our methodology. The SCEC fault geometry for the three-segmented Landers rupture is included and extended at both ends to a total length of 200 km. We followed the 2-D spatial correlated Dc distributions based on Hillers et. al. (2007) that associates Dc distribution with different degrees of fault maturity. The fault maturity is related to the variability of Dc on a microscopic scale. Large variations of Dc represents immature faults and lower variations of Dc represents mature faults. Moreover we impose a taper (a-b) at the fault edges and limit the fault depth to 15 km. Using these settings, earthquake cycle simulations are performed to nucleate seismic events on different sections of the fault, and dynamic rupture modeling is used to propagate the ruptures. The fault segmentation brings complexity into the rupture process. For instance, the change of strike between fault segments enhances strong variations of stress. In fact, Oglesby and Mai (2012) show the normal stress varies from positive (clamping) to negative (unclamping) between fault segments, which leads to favorable or unfavorable conditions for rupture growth. To replicate these complexities and the effect of fault segmentation in the rupture process, we perform earthquake cycles with dynamic rupture modeling and generate events similar to the Mw 7.3 Landers earthquake. We extract the asperities of these events and analyze the scaling relations between rupture area, average slip and combined area of asperities versus moment magnitude. Finally, the simulated ground motions will be validated by comparison of simulated response spectra with recorded response spectra and with response spectra from ground motion prediction models. This research is sponsored by the Japan Nuclear Regulation Authority.

Molecular characterization and phylogenetic relationships among microsporidian isolates infecting silkworm, Bombyx mori using small subunit rRNA (SSU-rRNA) gene sequence analysis.

PubMed

Nath, B Surendra; Gupta, S K; Bajpai, A K

2012-12-01

The life cycle, spore morphology, pathogenicity, tissue specificity, mode of transmission and small subunit rRNA (SSU-rRNA) gene sequence analysis of the five new microsporidian isolates viz., NIWB-11bp, NIWB-12n, NIWB-13md, NIWB-14b and NIWB-15mb identified from the silkworm, Bombyx mori have been studied along with type species, NIK-1s_mys. The life cycle of the microsporidians identified exhibited the sequential developmental cycles that are similar to the general developmental cycle of the genus, Nosema. The spores showed considerable variations in their shape, length and width. The pathogenicity observed was dose-dependent and differed from each of the microsporidian isolates; the NIWB-15mb was found to be more virulent than other isolates. All of the microsporidians were found to infect most of the tissues examined and showed gonadal infection and transovarial transmission in the infected silkworms. SSU-rRNA sequence based phylogenetic tree placed NIWB-14b, NIWB-12n and NIWB-11bp in a separate branch along with other Nosema species and Nosema bombycis; while NIWB-15mb and NIWB-13md together formed another cluster along with other Nosema species. NIK-1s_mys revealed a signature sequence similar to standard type species, N. bombycis, indicating that NIK-1s_mys is similar to N. bombycis. Based on phylogenetic relationships, branch length information based on genetic distance and nucleotide differences, we conclude that the microsporidian isolates identified are distinctly different from the other known species and belonging to the genus, Nosema. This SSU-rRNA gene sequence analysis method is found to be more useful approach in detecting different and closely related microsporidians of this economically important domestic insect.

A Three-Dimensional Human Atrial Model with Fiber Orientation. Electrograms and Arrhythmic Activation Patterns Relationship

PubMed Central

Tobón, Catalina; Ruiz-Villa, Carlos A.; Heidenreich, Elvio; Romero, Lucia; Hornero, Fernando; Saiz, Javier

2013-01-01

The most common sustained cardiac arrhythmias in humans are atrial tachyarrhythmias, mainly atrial fibrillation. Areas of complex fractionated atrial electrograms and high dominant frequency have been proposed as critical regions for maintaining atrial fibrillation; however, there is a paucity of data on the relationship between the characteristics of electrograms and the propagation pattern underlying them. In this study, a realistic 3D computer model of the human atria has been developed to investigate this relationship. The model includes a realistic geometry with fiber orientation, anisotropic conductivity and electrophysiological heterogeneity. We simulated different tachyarrhythmic episodes applying both transient and continuous ectopic activity. Electrograms and their dominant frequency and organization index values were calculated over the entire atrial surface. Our simulations show electrograms with simple potentials, with little or no cycle length variations, narrow frequency peaks and high organization index values during stable and regular activity as the observed in atrial flutter, atrial tachycardia (except in areas of conduction block) and in areas closer to ectopic activity during focal atrial fibrillation. By contrast, cycle length variations and polymorphic electrograms with single, double and fragmented potentials were observed in areas of irregular and unstable activity during atrial fibrillation episodes. Our results also show: 1) electrograms with potentials without negative deflection related to spiral or curved wavefronts that pass over the recording point and move away, 2) potentials with a much greater proportion of positive deflection than negative in areas of wave collisions, 3) double potentials related with wave fragmentations or blocking lines and 4) fragmented electrograms associated with pivot points. Our model is the first human atrial model with realistic fiber orientation used to investigate the relationship between different atrial arrhythmic propagation patterns and the electrograms observed at more than 43000 points on the atrial surface. PMID:23408928

Discharge estimation from H-ADCP measurements in a tidal river subject to sidewall effects and a mobile bed

NASA Astrophysics Data System (ADS)

Sassi, M. G.; Hoitink, A. J. F.; Vermeulen, B.; Hidayat, null

2011-06-01

Horizontal acoustic Doppler current profilers (H-ADCPs) can be employed to estimate river discharge based on water level measurements and flow velocity array data across a river transect. A new method is presented that accounts for the dip in velocity near the water surface, which is caused by sidewall effects that decrease with the width to depth ratio of a channel. A boundary layer model is introduced to convert single-depth velocity data from the H-ADCP to specific discharge. The parameters of the model include the local roughness length and a dip correction factor, which accounts for the sidewall effects. A regression model is employed to translate specific discharge to total discharge. The method was tested in the River Mahakam, representing a large river of complex bathymetry, where part of the flow is intrinsically three-dimensional and discharge rates exceed 8000 m3 s-1. Results from five moving boat ADCP campaigns covering separate semidiurnal tidal cycles are presented, three of which are used for calibration purposes, whereas the remaining two served for validation of the method. The dip correction factor showed a significant correlation with distance to the wall and bears a strong relation to secondary currents. The sidewall effects appeared to remain relatively constant throughout the tidal cycles under study. Bed roughness length is estimated at periods of maximum velocity, showing more variation at subtidal than at intratidal time scales. Intratidal variations were particularly obvious during bidirectional flow conditions, which occurred only during conditions of low river discharge. The new method was shown to outperform the widely used index velocity method by systematically reducing the relative error in the discharge estimates.

The Effect of Limited Diffusion and Wet-Dry Cycling on Reversible Polymerization Reactions: Implications for Prebiotic Synthesis of Nucleic Acids.

PubMed

Higgs, Paul G

2016-06-08

A long-standing problem for the origins of life is that polymerization of many biopolymers, including nucleic acids and peptides, is thermodynamically unfavourable in aqueous solution. If bond making and breaking is reversible, monomers and very short oligomers predominate. Recent experiments have shown that wetting and drying cycles can overcome this problem and drive the formation of longer polymers. In the dry phase, bond formation is favourable, but diffusion is restricted, and bonds only form between monomers that are initially close together. In the wet phase, some of the bonds are hydrolyzed. However, repositioning of the molecules allows new bonds to form in the next dry phase, leading to an increase in mean polymer length. Here, we consider a simple theoretical model that explains the effect of cycling. There is an equilibrium length distribution with a high mean length that could be achieved if diffusion occurred freely in the dry phase. This equilibrium is inaccessible without diffusion. A single dry cycle without diffusion leads to mean lengths much shorter than this. Repeated cycling leads to a significant increase in polymerization relative to a single cycle. In the most favourable case, cycling leads to the same equilibrium length distribution as would be achieved if free diffusion were possible in the dry phase. These results support the RNA World scenario by explaining a potential route to synthesis of long RNAs; however, they also imply that cycling would be beneficial to the synthesis of other kinds of polymers, including peptides, where bond formation involves a condensation reaction.

The Effect of Limited Diffusion and Wet–Dry Cycling on Reversible Polymerization Reactions: Implications for Prebiotic Synthesis of Nucleic Acids

PubMed Central

Higgs, Paul G.

2016-01-01

A long-standing problem for the origins of life is that polymerization of many biopolymers, including nucleic acids and peptides, is thermodynamically unfavourable in aqueous solution. If bond making and breaking is reversible, monomers and very short oligomers predominate. Recent experiments have shown that wetting and drying cycles can overcome this problem and drive the formation of longer polymers. In the dry phase, bond formation is favourable, but diffusion is restricted, and bonds only form between monomers that are initially close together. In the wet phase, some of the bonds are hydrolyzed. However, repositioning of the molecules allows new bonds to form in the next dry phase, leading to an increase in mean polymer length. Here, we consider a simple theoretical model that explains the effect of cycling. There is an equilibrium length distribution with a high mean length that could be achieved if diffusion occurred freely in the dry phase. This equilibrium is inaccessible without diffusion. A single dry cycle without diffusion leads to mean lengths much shorter than this. Repeated cycling leads to a significant increase in polymerization relative to a single cycle. In the most favourable case, cycling leads to the same equilibrium length distribution as would be achieved if free diffusion were possible in the dry phase. These results support the RNA World scenario by explaining a potential route to synthesis of long RNAs; however, they also imply that cycling would be beneficial to the synthesis of other kinds of polymers, including peptides, where bond formation involves a condensation reaction. PMID:27338479

Crack Initiation and Growth Behavior at Corrosion Pit in 2024-T3 Aluminum Alloy

DTIC Science & Technology

2014-09-01

63 Figure B.1: The crack length vs. number of cycles during fatigue testing for the 2AI-01 specimen...number of cycles during fatigue testing for the the 2AI- 02 specimen...64 Figure B.3: The crack length vs. number of cycles during fatigue testing for the 2Sl-01 specimen

Chemical Reactions in Turbulent Mixing Flows.

DTIC Science & Technology

1987-06-01

longer in the z-t diagrams for higher fuel flow rates (consistent with longer flame lengths ) and, further, the celerity of a structure at a given axial...clocking rate synchronized with the cycle, while the slower clocking rate data corres- pond to about seven cycles. Flame lengths [61, Z,,D, for various...heat fABlLE I releases studied here are also shown in Table I Flame Lengths and Axial Measurement Stations, These flame lengths are based on 50% intermit

Cell cycle phases in the unequal mother/daughter cell cycles of Saccharomyces cerevisiae.

PubMed

Brewer, B J; Chlebowicz-Sledziewska, E; Fangman, W L

1984-11-01

During cell division in the yeast Saccharomyces cerevisiae mother cells produce buds (daughter cells) which are smaller and have longer cell cycles. We performed experiments to compare the lengths of cell cycle phases in mothers and daughters. As anticipated from earlier indirect observations, the longer cell cycle time of daughter cells is accounted for by a longer G1 interval. The S-phase and the G2-phase are of the same duration in mother and daughter cells. An analysis of five isogenic strains shows that cell cycle phase lengths are independent of cell ploidy and mating type.

Variability and interaction of some egg physical and eggshell quality attributes during the entire laying hen cycle.

PubMed

Sirri, F; Zampiga, M; Berardinelli, A; Meluzzi, A

2018-05-01

The aim of this study was to investigate the variability and relationships between some egg physical (egg weight, width, length, shape index, and surface area) and eggshell parameters (weight and percentage, thickness, breaking strength, and L*, a*, and b* values) during the entire laying hen cycle. A total of 8,000 eggs was collected every 5 wk, from 30 to 81 wk of hen age (10 samplings of 400 eggs/house), in 2 identical poultry houses equipped with enriched cages. For the statistical analysis, ANOVA, Bivariate Correlation, Principal Component Analysis (PCA), and Hierarchical Cluster Analysis were used. An increase of egg weight, length, and eggshell lightness (L*) associated with a reduction of eggshell percentage, breaking strength, and redness (a*) was observed as the hen aged (P < 0.05). Overall, the coefficients of variation resulted in <5% in width, length, shape index, and egg surface area; from 5 to 10% of egg weight, shell weight, shell percentage, shell thickness, L*, and b*; and >10% of eggshell breaking strength and a*. According to the PCA, the highest changes during the laying cycle are related to egg physical parameters (32%) and to eggshell breaking strength, percentage, and thickness (26%). The egg physical parameters appeared to be strongly correlated to each other, whereas a slight correlation between eggshell breaking strength and color attributes were evidenced (-0.231 and 0.289, respectively, for L* and a*; P < 0.01). Hierarchical cluster analysis, based on principal components of the overall egg attributes, is hereby considered, and evidenced dissimilarities for eggs laid from peak production up for 39 wk of hen age from the eggs laid afterwards. The latter group could also be divided into 2 subgroups, one comprising eggs laid from 44 and 53 wk of hen age and the other from 58 wk to the end. In conclusion, the large dataset created in this study allowed to extrapolate some robust information regarding the variability and correlations of the egg physical and eggshell quality attributes throughout the entire laying hen cycle.

ACOG Committee Opinion No. 651: Menstruation in Girls and Adolescents: Using the Menstrual Cycle as a Vital Sign.

PubMed

2015-12-01

Despite variations worldwide and within the U.S. population, median age at menarche has remained relatively stable-between 12 years and 13 years-across well-nourished populations in developed countries. Environmental factors, including socioeconomic conditions, nutrition, and access to preventive health care, may influence the timing and progression of puberty. A number of medical conditions can cause abnormal uterine bleeding, characterized by unpredictable timing and variable amount of flow. Clinicians should educate girls and their caretakers (eg, parents or guardians) about what to expect of a first menstrual period and the range for normal cycle length of subsequent menses. Identification of abnormal menstrual patterns in adolescence may improve early identification of potential health concerns for adulthood. It is important for clinicians to have an understanding of the menstrual patterns of adolescent girls, the ability to differentiate between normal and abnormal menstruation, and the skill to know how to evaluate the adolescent girl patient. By including an evaluation of the menstrual cycle as an additional vital sign, clinicians reinforce its importance in assessing overall health status for patients and caretakers.

Geophysical, archaeological, and historical evidence support a solar-output model for climate change

PubMed Central

Perry, Charles A.; Hsu, Kenneth J.

2000-01-01

Although the processes of climate change are not completely understood, an important causal candidate is variation in total solar output. Reported cycles in various climate-proxy data show a tendency to emulate a fundamental harmonic sequence of a basic solar-cycle length (11 years) multiplied by 2N (where N equals a positive or negative integer). A simple additive model for total solar-output variations was developed by superimposing a progression of fundamental harmonic cycles with slightly increasing amplitudes. The timeline of the model was calibrated to the Pleistocene/Holocene boundary at 9,000 years before present. The calibrated model was compared with geophysical, archaeological, and historical evidence of warm or cold climates during the Holocene. The evidence of periods of several centuries of cooler climates worldwide called “little ice ages,” similar to the period anno Domini (A.D.) 1280–1860 and reoccurring approximately every 1,300 years, corresponds well with fluctuations in modeled solar output. A more detailed examination of the climate sensitive history of the last 1,000 years further supports the model. Extrapolation of the model into the future suggests a gradual cooling during the next few centuries with intermittent minor warmups and a return to near little-ice-age conditions within the next 500 years. This cool period then may be followed approximately 1,500 years from now by a return to altithermal conditions similar to the previous Holocene Maximum. PMID:11050181

PHASE RELATIONSHIPS OF SOLAR HEMISPHERIC TOROIDAL AND POLOIDAL CYCLES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Muraközy, J., E-mail: murakozy.judit@csfk.mta.hu

2016-08-01

The solar northern and southern hemispheres exhibit differences in their intensities and time profiles of the activity cycles. The time variation of these properties was studied in a previous article covering the data from Cycles 12–23. The hemispheric phase lags exhibited a characteristic variation: the leading role was exchanged between hemispheres every four cycles. The present work extends the investigation of this variation using the data of Staudacher and Schwabe in Cycles 1–4 and 7–10 as well as Spörer’s data in Cycle 11. The previously observed variation cannot be clearly recognized using the data of Staudacher, Schwabe, and Spörer. However,more » it is more interesting that the phase lags of the reversals of the magnetic fields at the poles follow the same variations as those of the hemispheric cycles in Cycles 12–23, i.e., one of the hemispheres leads in four cyles and the leading role jumps to the opposite hemisphere in the next four cycles. This means that this variation is a long-term property of the entire solar dynamo mechanism, for both the toroidal and poloidal fields, which hints at an unidentified component of the process responsible for the long-term memory.« less

Influence of the Solar Cycle on Turbulence Properties and Cosmic-Ray Diffusion

NASA Astrophysics Data System (ADS)

Zhao, L.-L.; Adhikari, L.; Zank, G. P.; Hu, Q.; Feng, X. S.

2018-04-01

The solar cycle dependence of various turbulence quantities and cosmic-ray (CR) diffusion coefficients is investigated by using OMNI 1 minute resolution data over 22 years. We employ Elsässer variables z ± to calculate the magnetic field turbulence energy and correlation lengths for both the inwardly and outwardly directed interplanetary magnetic field (IMF). We present the temporal evolution of both large-scale solar wind (SW) plasma variables and small-scale magnetic fluctuations. Based on these observed quantities, we study the influence of solar activity on CR parallel and perpendicular diffusion using quasi-linear theory and nonlinear guiding center theory, respectively. We also evaluate the radial evolution of the CR diffusion coefficients by using the boundary conditions for different solar activity levels. We find that in the ecliptic plane at 1 au (1), the large-scale SW temperature T, velocity V sw, Alfvén speed V A , and IMF magnitude B 0 are positively related to solar activity; (2) the fluctuating magnetic energy density < {{z}+/- }2> , residual energy E D , and corresponding correlation functions all have an obvious solar cycle dependence. The residual energy E D is always negative, which indicates that the energy in magnetic fluctuations is larger than the energy in kinetic fluctuations, especially at solar maximum; (3) the correlation length λ for magnetic fluctuations does not show significant solar cycle variation; (4) the temporally varying shear source of turbulence, which is most important in the inner heliosphere, depends on the solar cycle; (5) small-scale fluctuations may not depend on the direction of the background magnetic field; and (6) high levels of SW fluctuations will increase CR perpendicular diffusion and decrease CR parallel diffusion, but this trend can be masked if the background IMF changes in concert with turbulence in response to solar activity. These results provide quantitative inputs for both turbulence transport models and CR diffusion models, and also provide valuable insight into the long-term modulation of CRs in the heliosphere.

Predicting the Size of Sunspot Cycle 24 on the Basis of Single- and Bi-Variate Geomagnetic Precursor Methods

NASA Technical Reports Server (NTRS)

Wilson, Robert M.; Hathaway, David H.

2009-01-01

Examined are single- and bi-variate geomagnetic precursors for predicting the maximum amplitude (RM) of a sunspot cycle several years in advance. The best single-variate fit is one based on the average of the ap index 36 mo prior to cycle minimum occurrence (E(Rm)), having a coefficient of correlation (r) equal to 0.97 and a standard error of estimate (se) equal to 9.3. Presuming cycle 24 not to be a statistical outlier and its minimum in March 2008, the fit suggests cycle 24 s RM to be about 69 +/- 20 (the 90% prediction interval). The weighted mean prediction of 11 statistically important single-variate fits is 116 +/- 34. The best bi-variate fit is one based on the maximum and minimum values of the 12-mma of the ap index; i.e., APM# and APm*, where # means the value post-E(RM) for the preceding cycle and * means the value in the vicinity of cycle minimum, having r = 0.98 and se = 8.2. It predicts cycle 24 s RM to be about 92 +/- 27. The weighted mean prediction of 22 statistically important bi-variate fits is 112 32. Thus, cycle 24's RM is expected to lie somewhere within the range of about 82 to 144. Also examined are the late-cycle 23 behaviors of geomagnetic indices and solar wind velocity in comparison to the mean behaviors of cycles 2023 and the geomagnetic indices of cycle 14 (RM = 64.2), the weakest sunspot cycle of the modern era.

Electrophysiologic Study

PubMed Central

Gold, Daniel R.; Catanzaro, John N.; Makaryus, John N.; Waldman, Cory; Sauer, William H.; Sison, Cristina; Makaryus, Amgad N.; Altman, Erik; Jadonath, Ram; Beldner, Stuart

2010-01-01

Studies have shown the predictive value of inducible ventricular tachycardia and clinical arrhythmia in patients who have structural heart disease. We examined the possible predictive value of electrophysiologic study before the placement of an implantable cardioverter-defibrillator. Our retrospective study group comprised 315 patients who had ventricular tachycardia that was inducible during electrophysiologic study and who had undergone at least 1 month of follow-up (247 men; mean age, 66.9 ± 13.5 yr; mean follow-up, 24.9 ± 14.8 mo). Recorded characteristics included induced ventricular tachycardia cycle length, atrio-His and His-ventricular electrograms, PR and QT intervals, QRS duration, and drug therapy. Of the 315 patients, 97 experienced ventricular arrhythmia during the follow-up period, as registered by 184 of more than 400 interrogations. There were 187 episodes of ventricular arrhythmia (tachycardia, 178; fibrillation, 9) during 652.5 person-years of follow-up. Subjects with a cycle length ≥240 msec were more likely to have an earlier 1st arrhythmia than those with a cycle length <240 msec (P=0.032). A quarter of the subjects with a cycle length ≥240 msec had their 1st arrhythmia by 19.14 months, compared with 23.8 months for a quarter of the subjects with a cycle length <240 msec (P <0.032). Among the electrophysiologic characteristics examined, inducible ventricular tachycardia with a cycle length ≥240 msec is predictive of appropriate implantable cardioverter-defibrillator therapy at an earlier time. This may have prognostic implications that warrant implantable cardioverter-defibrillator programming to enable appropriate antitachycardia pacing in this group of patients. PMID:20548804

Modeling spatially localized photonic nanojets from phase diffraction gratings

NASA Astrophysics Data System (ADS)

Geints, Yu. E.; Zemlyanov, A. A.

2016-04-01

We investigated numerically the specific spatially localized intense optical structure, a photonic nanojet (PNJ), formed in the near-field scattering of optical radiation at phase diffraction gratings. The finite-difference time-domain technique was employed to study the PNJ key parameters (length, width, focal distance, and intensity) produced by diffraction gratings with the saw-tooth, rectangle, and hemispheric line profiles. Our analysis showed that each type of diffraction gratings produces a photonic jet with unique characteristics. Based on the numerical calculations, we demonstrate that the PNJ could be manipulated in a wide range through the variation of period, duty cycle, and shape of diffraction grating rulings.

Extending Depot Length and Intervals for DDG 51 Class Ships: Examining the 72 Month Operational Cycle

DTIC Science & Technology

2016-01-01

tenance period to achieve planned expected service life ( ESL ), as well as the length, workload, and periodicity of a continuous maintenance...a ship’s service life but extends the length of each deployment. Figure 2.1 compares the number of deployments that can be made over the ESL of...ships in different cycle lengths. The ESL of DDG-51 Arleigh Burke–class destroyers Flight I and II is 35 years, and Flight IIA has an ESL of 40 years

Inferring time-varying recharge from inverse analysis of long-term water levels

NASA Astrophysics Data System (ADS)

Dickinson, Jesse E.; Hanson, R. T.; Ferré, T. P. A.; Leake, S. A.

2004-07-01

Water levels in aquifers typically vary in response to time-varying rates of recharge, suggesting the possibility of inferring time-varying recharge rates on the basis of long-term water level records. Presumably, in the southwestern United States (Arizona, Nevada, New Mexico, southern California, and southern Utah), rates of mountain front recharge to alluvial aquifers depend on variations in precipitation rates due to known climate cycles such as the El Niño-Southern Oscillation index and the Pacific Decadal Oscillation. This investigation examined the inverse application of a one-dimensional analytical model for periodic flow described by Lloyd R. Townley in 1995 to estimate periodic recharge variations on the basis of variations in long-term water level records using southwest aquifers as the case study. Time-varying water level records at various locations along the flow line were obtained by simulation of forward models of synthetic basins with applied sinusoidal recharge of either a single period or composite of multiple periods of length similar to known climate cycles. Periodic water level components, reconstructed using singular spectrum analysis (SSA), were used to calibrate the analytical model to estimate each recharge component. The results demonstrated that periodic recharge estimates were most accurate in basins with nearly uniform transmissivity and the accuracy of the recharge estimates depends on monitoring well location. A case study of the San Pedro Basin, Arizona, is presented as an example of calibrating the analytical model to real data.

Inferring time‐varying recharge from inverse analysis of long‐term water levels

USGS Publications Warehouse

Dickinson, Jesse; Hanson, R.T.; Ferré, T.P.A.; Leake, S.A.

2004-01-01

Water levels in aquifers typically vary in response to time‐varying rates of recharge, suggesting the possibility of inferring time‐varying recharge rates on the basis of long‐term water level records. Presumably, in the southwestern United States (Arizona, Nevada, New Mexico, southern California, and southern Utah), rates of mountain front recharge to alluvial aquifers depend on variations in precipitation rates due to known climate cycles such as the El Niño‐Southern Oscillation index and the Pacific Decadal Oscillation. This investigation examined the inverse application of a one‐dimensional analytical model for periodic flow described by Lloyd R. Townley in 1995 to estimate periodic recharge variations on the basis of variations in long‐term water level records using southwest aquifers as the case study. Time‐varying water level records at various locations along the flow line were obtained by simulation of forward models of synthetic basins with applied sinusoidal recharge of either a single period or composite of multiple periods of length similar to known climate cycles. Periodic water level components, reconstructed using singular spectrum analysis (SSA), were used to calibrate the analytical model to estimate each recharge component. The results demonstrated that periodic recharge estimates were most accurate in basins with nearly uniform transmissivity and the accuracy of the recharge estimates depends on monitoring well location. A case study of the San Pedro Basin, Arizona, is presented as an example of calibrating the analytical model to real data.

A factor analysis approach to examining relationships among ovarian steroid concentrations, gonadotrophin concentrations and menstrual cycle length characteristics in healthy, cycling women

PubMed Central

Barrett, E.S.; Thune, I.; Lipson, S.F.; Furberg, A.-S.; Ellison, P.T.

2013-01-01

STUDY QUESTION How are ovarian steroid concentrations, gonadotrophins and menstrual cycle characteristics inter-related within normal menstrual cycles? SUMMARY ANSWER Within cycles, measures of estradiol production are highly related to one another, as are measures of progesterone production; however, the two hormones also show some independence from one another, and measures of cycle length and gonadotrophin concentrations show even greater independence, indicating minimal integration within cycles. WHAT IS KNOWN ALREADY The menstrual cycle is typically conceptualized as a cohesive unit, with hormone levels, follicular development and ovulation all closely inter-related within a single cycle. Empirical support for this idea is limited, however, and to our knowledge, no analysis has examined the relationships among all of these components simultaneously. STUDY DESIGN, SIZE, DURATION A total of 206 healthy, cycling Norwegian women participated in a prospective cohort study (EBBA-I) over the duration of a single menstrual cycle. Of these, 192 contributed hormonal and cycle data to the current analysis. PARTICIPANTS/MATERIALS, SETTING, METHODS Subjects provided daily saliva samples throughout the menstrual cycle from which estradiol and progesterone concentrations were measured. FSH and LH concentrations were measured in serum samples from three points in the same menstrual cycle and cycle length characteristics were calculated based on hormonal data and menstrual records. A factor analysis was conducted to examine the underlying relationships among 22 variables derived from the hormonal data and menstrual cycle characteristics. MAIN RESULTS AND THE ROLE OF CHANCE Six rotated factors emerged, explaining 80% of the variance in the data. Of these, factors representing estradiol and progesterone concentrations accounted for 37 and 13% of the variance, respectively. There was some association between measures of estradiol and progesterone production within cycles; however, cycle length characteristics and gonadotrophin concentrations showed little association with any measure of ovarian hormone concentrations. LIMITATIONS, REASONS FOR CAUTION Our summary measures of ovarian hormones may be imprecise in women with extremely long or short cycles, which could affect the patterns emerging in the factor analysis. Given that we only had data from one cycle on each woman, we cannot address how cycle characteristics may covary within individual women across multiple cycles. WIDER IMPLICATIONS OF THE FINDINGS Our findings are generalizable to other healthy populations with typical cycles, however, may not be applicable to cycles that are anovulatory, extreme in length or otherwise atypical. The results support previous findings that measures of estradiol production are highly correlated across the cycle, as are measures of progesterone production. Estradiol and progesterone concentrations are associated with one another, furthermore. However factor analysis also revealed more complex underlying patterns in the menstrual cycle, highlighting the fact that gonadotrophin concentrations and cycle length characteristics are virtually independent of ovarian hormones. These results suggest that despite integration of follicular and luteal ovarian steroid production across the cycle, cycle quality is a multi-faceted construct, rather than a single dimension. STUDY FUNDING/COMPETING INTEREST(S) The EBBA-I study was supported by a grant from the Norwegian Cancer Society (49 258, 05087); Foundation for the Norwegian Health and Rehabilitation Organizations (59010-2000/2001/2002); Aakre Foundation (5695-2000, 5754-2002) and Health Region East. The current analyses were completed under funding from the National Institutes of Health (K12 ES019852). No competing interests declared. PMID:23250924

Segregating YKU80 and TLC1 alleles underlying natural variation in telomere properties in wild yeast.

PubMed

Liti, Gianni; Haricharan, Svasti; Cubillos, Francisco A; Tierney, Anna L; Sharp, Sarah; Bertuch, Alison A; Parts, Leopold; Bailes, Elizabeth; Louis, Edward J

2009-09-01

In yeast, as in humans, telomere length varies among individuals and is controlled by multiple loci. In a quest to define the extent of variation in telomere length, we screened 112 wild-type Saccharomyces sensu stricto isolates. We found extensive telomere length variation in S. paradoxus isolates. This phenotype correlated with their geographic origin: European strains were observed to have extremely short telomeres (<150 bp), whereas American isolates had telomeres approximately three times as long (>400 bp). Insertions of a URA3 gene near telomeres allowed accurate analysis of individual telomere lengths and telomere position effect (TPE). Crossing the American and European strains resulted in F1 spores with a continuum of telomere lengths consistent with what would be predicted if many quantitative trait loci (QTLs) were involved in length maintenance. Variation in TPE is similarly quantitative but only weakly correlated with telomere length. Genotyping F1 segregants indicated several QTLs associated with telomere length and silencing variation. These QTLs include likely candidate genes but also map to regions where there are no known genes involved in telomeric properties. We detected transgressive segregation for both phenotypes. We validated by reciprocal hemizygosity that YKU80 and TLC1 are telomere-length QTLs in the two S. paradoxus subpopulations. Furthermore, we propose that sequence divergence within the Ku heterodimer generates negative epistasis within one of the allelic combinations (American-YKU70 and European-YKU80) resulting in very short telomeres.

Segregating YKU80 and TLC1 Alleles Underlying Natural Variation in Telomere Properties in Wild Yeast

PubMed Central

Liti, Gianni; Haricharan, Svasti; Cubillos, Francisco A.; Tierney, Anna L.; Sharp, Sarah; Bertuch, Alison A.; Parts, Leopold; Bailes, Elizabeth; Louis, Edward J.

2009-01-01

In yeast, as in humans, telomere length varies among individuals and is controlled by multiple loci. In a quest to define the extent of variation in telomere length, we screened 112 wild-type Saccharomyces sensu stricto isolates. We found extensive telomere length variation in S. paradoxus isolates. This phenotype correlated with their geographic origin: European strains were observed to have extremely short telomeres (<150 bp), whereas American isolates had telomeres approximately three times as long (>400 bp). Insertions of a URA3 gene near telomeres allowed accurate analysis of individual telomere lengths and telomere position effect (TPE). Crossing the American and European strains resulted in F1 spores with a continuum of telomere lengths consistent with what would be predicted if many quantitative trait loci (QTLs) were involved in length maintenance. Variation in TPE is similarly quantitative but only weakly correlated with telomere length. Genotyping F1 segregants indicated several QTLs associated with telomere length and silencing variation. These QTLs include likely candidate genes but also map to regions where there are no known genes involved in telomeric properties. We detected transgressive segregation for both phenotypes. We validated by reciprocal hemizygosity that YKU80 and TLC1 are telomere-length QTLs in the two S. paradoxus subpopulations. Furthermore, we propose that sequence divergence within the Ku heterodimer generates negative epistasis within one of the allelic combinations (American-YKU70 and European-YKU80) resulting in very short telomeres. PMID:19763176

Using Kalman Filter Chemical Data Assimilation to Study Ozone Catalytic Loss Cycles in January 1992

NASA Technical Reports Server (NTRS)

Lary, David J.

2002-01-01

This paper presents for the first time a global study of the ozone catalytic destruction cycles operating in the stratosphere using a stratospheric analyses for January 1992. The chemical analyses were produced using a Kalman filter data assimilation system. Because a major component of the variability of trace gases is due to the atmospheric motions the analyses have been cast in a flow-tracking coordinate system that moves with the large scale flow pattern. Particular attention is paid to the kinetic aspects of these cycles such as the rate limiting step and chain length. Although it is an important kinetic parameter, the chain length of the various cycles is seldom considered when the various catalytic cycles are discussed. This survey highlights that in the low stratosphere the cycles involving HO2 and halogens (notably bromine) are particularly important. In approximate order of effectiveness the most important ozone loss cycles in the polar lower stratosphere are the BrO/ClO, HO2/BrO, and OH/HO2 cycles. The ClO/ClO cycle clearly delineates the regions of chlorine activation. The chain length of the HO2/ClO, OH/HO2, Br/BrO, and ClO/NO2, clearly delineate the vortex edge region. The chain length of the BrO/NO2 and Cl/NO2 cycles highlight the regions of chemical processing outside the vortex where streamers of chemically processed air are stripped-off and transported away from the vortex. This is also true in the very low stratosphere for the Cl/ClO and BrO/ClO cycles.

Rhythmic chewing with oral jaws in teleost fishes: a comparison with amniotes.

PubMed

Gintof, Chris; Konow, Nicolai; Ross, Callum F; Sanford, Christopher P J

2010-06-01

Intra-oral prey processing (chewing) using the mandibular jaws occurs more extensively among teleost fishes than previously documented. The lack of muscle spindles, gamma-motoneurons and periodontal afferents in fishes makes them useful for testing hypotheses regarding the relationship between these sensorimotor components and rhythmic chewing in vertebrates. Electromyography (EMG) data from the adductor mandibulae (AM) were used to quantify variation in chew cycle duration in the bowfin Amia, three osteoglossomorphs (bony-tongues), four salmonids and one esocid (pike). All species chewed prey using their oral jaw in repetitive trains of between 3 and 30 consecutive chews, a pattern that resembles cyclic chewing in amniote vertebrates. Variance in rhythmicity was compared within and between lineages using coefficients of variation and Levene's test for homogeneity of variance. These comparisons revealed that some teleosts exhibit degrees of rhythmicity that are comparable to mammalian mastication and higher than in lepidosaurs. Moreover, chew cycle durations in fishes, as in mammals, scale positively with mandible length. Chewing among basal teleosts may be rhythmic because it is stereotyped and inflexible, the result of patterned interactions between sensory feedback and a central pattern generator, because the lack of a fleshy tongue renders jaw-tongue coordination unnecessary and/or because stereotyped opening and closing movements are important for controlling fluid flow in the oral cavity.

Cycle-to-cycle IMEP fluctuations in a stoichiometrically-fueled S. I. engine at low speed and load

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sztenderowicz, M.L.; Heywood, J.B.

1990-01-01

In a previous experimental investigation of the effects of residual gas nonuniformity on S.I. engine combustion variability, it was found that eliminating residual gas nonuniformity by skip firing has no detectable impact on the flame development process, but nonetheless caused IMEP fluctuations to drop by about half under very light load conditions. This paper reports that under further investigation, it has been determined that the observed IMEP fluctuations, particularly for optimally-phased cycles, are controlled by cyclic variations in the amount of fuel burning per cycle. Real-time sampling of the hydrocarbon concentration in the exhaust port has shown that the variationmore » in fuel burned per cycle is not primarily due to variations in combustion completeness, and must therefore be attributed to variations in the amount of fuel trapped within the cylinder prior to combustion. Several mechanisms for this variation were identified, all of which are plausible but none of which are likely to dominate: variations in fuel quantity left in the cylinder from the previous cycle; variations in the fluid dynamics of the intake process; fresh charge displacement due to variations in residual gas temperature; variations in leakage through valves; and fluctuations in crevice effects and blow-by.« less

Length Variation in Mitochondrial DNA of the Minnow Cyprinella Spiloptera

PubMed Central

Broughton, R. E.; Dowling, T. E.

1994-01-01

Length differences in animal mitochondrial DNA (mtDNA) are common, frequently due to variation in copy number of direct tandem duplications. While such duplications appear to form without great difficulty in some taxonomic groups, they appear to be relatively short-lived, as typical duplication products are geographically restricted within species and infrequently shared among species. To better understand such length variation, we have studied a tandem and direct duplication of approximately 260 bp in the control region of the cyprinid fish, Cyprinella spiloptera. Restriction site analysis of 38 individuals was used to characterize population structure and the distribution of variation in repeat copy number. This revealed two length variants, including individuals with two or three copies of the repeat, and little geographic structure among populations. No standard length (single copy) genomes were found and heteroplasmy, a common feature of length variation in other taxa, was absent. Nucleotide sequence of tandem duplications and flanking regions localized duplication junctions in the phenylalanine tRNA and near the origin of replication. The locations of these junctions and the stability of folded repeat copies support the hypothesized importance of secondary structures in models of duplication formation. PMID:8001785

Rotating shift work and menstrual characteristics in a cohort of Chinese nurses.

PubMed

Wang, Yizi; Gu, Fang; Deng, Mingfen; Guo, Lan; Lu, Ciyong; Zhou, Canquan; Chen, Shouzhen; Xu, Yanwen

2016-05-04

Shift work disrupts the circadian rhythm and may cause menstruation disorders. This study assessed the impact of shift work on menstrual cycle in a population of Chinese nurses. Questionnaires on menstrual characteristics and shift schedules were sent to female nurses of the First Affiliated Hospital of Sun Yat-sen University (FAHSYSU) and Guanghua Hospital of Stomatology (GHHS), affiliated to Sun Yat-sen University. Part I was a cross-sectional study and included 139 nurses in GHHS who had regular 8:00-17:30 working (non-shift group), and 334 nurses from FAHSYSU who worked shifts, a response rate of 67.5 % and 59.6 %, respectively (age ≤ 50 years). Menstrual patterns were compared and age-adjusted relative risks of shift work were analyzed. Part II was a nested case-control study. Cases were nurses in Part I who had regular cycle with mean cycle length (MCL) of 25-31 days and but at least 3 days variation in MCL after starting shift work (n = 45). Controls consisted of 67 nurses with matching shift patterns and age, but no MCL changes. A control non-shift age-matched group consisted of 30 GHHS nurses with no MCL changes. A follow-up second questionnaire was sent 2 years later. In Part I, the shift group had a significantly higher proportion of nurses with menstrual cycle irregularity. The proportion of nurses with a cycle of 25-31 days decreased from 81.7 to 67.8 % after changing to shift work. Logistic regression analysis showed that night shift frequency was the only risk factor associated with cycle shortening. After adjusting for age, MCL was shorter when night work was performed > 7 times per month. In Part II, the mean change in MCL in the case group, including prolongation or shortening, was 4.115 ± 2.084 days after shift working. In the 2 years' follow-up, the MCL of the study group did not recover to the original length. Rotating shift work can increase the prevalence of menstrual cycle irregularity. Night shift frequency was the only risk factor associated with cycle reduced. Changes in MCL did not show recovery over a follow-up period of 2 years.

Seasonal and interannual variations of atmospheric CO2 and climate

USGS Publications Warehouse

Dettinger, M.D.; Ghil, M.

1998-01-01

Interannual variations of atmospheric CO2 concentrations at Mauna Loa are almost masked by the seasonal cycle and a strong trend; at the South Pole, the seasonal cycle is small and is almost lost in the trend and interannual variations. Singular-spectrum analysis (SSA) issued here to isolate and reconstruct interannual signals at both sites and to visualize recent decadal changes in the amplitude and phase of the seasonal cycle. Analysis of the Mauna Loa CO2 series illustrates a hastening of the CO2 seasonal cycle, a close temporal relation between Northern Hemisphere (NH) mean temperature trends and the amplitude of the seasonal CO2 cycle, and tentative ties between the latter and seasonality changes in temperature over the NH continents. Variations of the seasonal CO2 cycle at the South Pole differ from those at Mauna Loa: it is phase changes of the seasonal cycle at the South Pole, rather than amplitude changes, that parallel hemispheric and global temperature trends. The seasonal CO2 cycles exhibit earlier occurrences of the seasons by 7 days at Mauna Loa and 18 days at the South Pole. Interannual CO2 variations are shared at the two locations, appear to respond to tropical processes, and can be decomposed mostly into two periodicities, around (3 years)-1 and (4 years)-1, respectively. Joint SSA analyses of CO2 concentrations and tropical climate indices isolate a shared mode with a quasi-triennial (QT) period in which the CO2 and sea-surface temperature (SST) participation are in phase opposition. The other shared mode has a quasi-quadrennial (QQ) period and CO2 variations are in phase with the corresponding tropical SST variations throughout the tropics. Together these interannual modes exhibit a mean lag between tropical SSTs and CO2 variations of about 6-8 months, with SST leading. Analysis of the QT and QQ signals in global gridded SSTs, joint SSA of CO2 and ??13C isotopic ratios, and SSA of CO2 and NH-land temperatures indicate that the QT variations in CO2 mostly reflect upwelling variations in the eastern tropical Pacific. QQ variations are dominated by the CO2 signature of terrestrial-ecosystem response to global QQ climate variations. Climate variations associated with these two interannual components of tropical variability have very different effects on global climate and, especially, on terrestrial ecosystems and the carbon cycle.

Dynamics of core body temperature cycles in long-term measurements under real life conditions in women.

PubMed

Ekhart, D; Wicht, H; Kersken, T; Ackermann, H; Kaczmarczyk, M; Pretzsch, G; Alexander, H; Korf, H W

2018-01-01

Studies under real life conditions become more and more relevant in chronobiological and chronomedical research. The present study aims to analyze one of the most prominent biological rhythms: the core body temperature (CBT) rhythm in the real world outside the laboratory. CBT was recorded continuously in 37 healthy women (age between 21 and 44 years, median 29 years) with a newly developed intravaginal temperature sensor for up to 102 days. Sleep logs were available from 23 participants. To quantify the daily dynamics of each individual CBT-curve, novel measurement parameters are introduced which permit the quantification of the phase and shape of the CBT rhythms as well as their relation to the sleep-wake cycle. In addition to the classical phase markers (i.e. nadir and peak), the daily curves were segmented into quartiles by introducing the t25/t50/t75-values which can be used as phase and shape markers. At variance to previous studies, a conspicuous day-to-day variation was shown not only for the time point of the peak, but also for the time point of the nadir. However, the t-values, particularly the t75-value were relatively closely locked to external time and thus represent more reliable phase markers than the nadir. The (variable) time point of the nadir determined the period length, phase and shape of the subsequent CBT cycle. If a nadir occurred close to the wake-up time, the following cycle was considerably shorter than 24 hours, while a nadir distant from the wake-up time was followed by a longer cycle. Thus, the period lengths of the daily CBT cycles of each individual were characterized by an "expand/contract" rhythm. The analyses of the novel phase markers (t25/t50/t75) of the CBT curves allowed to identify "early" and "late" participants who may differ in their phase-response curves with regard to the entraining effect of light. In addition, the novel phase markers mirrored the different social entrainment conditions on weekends and workdays.

Decoupling processes and scales of shoreline morphodynamics

USGS Publications Warehouse

Hapke, Cheryl J.; Plant, Nathaniel G.; Henderson, Rachel E.; Schwab, William C.; Nelson, Timothy R.

2016-01-01

Behavior of coastal systems on time scales ranging from single storm events to years and decades is controlled by both small-scale sediment transport processes and large-scale geologic, oceanographic, and morphologic processes. Improved understanding of coastal behavior at multiple time scales is required for refining models that predict potential erosion hazards and for coastal management planning and decision-making. Here we investigate the primary controls on shoreline response along a geologically-variable barrier island on time scales resolving extreme storms and decadal variations over a period of nearly one century. An empirical orthogonal function analysis is applied to a time series of shoreline positions at Fire Island, NY to identify patterns of shoreline variance along the length of the island. We establish that there are separable patterns of shoreline behavior that represent response to oceanographic forcing as well as patterns that are not explained by this forcing. The dominant shoreline behavior occurs over large length scales in the form of alternating episodes of shoreline retreat and advance, presumably in response to storms cycles. Two secondary responses include long-term response that is correlated to known geologic variations of the island and the other reflects geomorphic patterns with medium length scale. Our study also includes the response to Hurricane Sandy and a period of post-storm recovery. It was expected that the impacts from Hurricane Sandy would disrupt long-term trends and spatial patterns. We found that the response to Sandy at Fire Island is not notable or distinguishable from several other large storms of the prior decade.

Effects of vertebral number variations on carcass traits and genotyping of Vertnin candidate gene in Kazakh sheep.

PubMed

Zhang, Zhifeng; Sun, Yawei; Du, Wei; He, Sangang; Liu, Mingjun; Tian, Changyan

2017-09-01

The vertebral number is associated with body length and carcass traits, which represents an economically important trait in farm animals. The variation of vertebral number has been observed in a few mammalian species. However, the variation of vertebral number and quantitative trait loci in sheep breeds have not been well addressed. In our investigation, the information including gender, age, carcass weight, carcass length and the number of thoracic and lumbar vertebrae from 624 China Kazakh sheep was collected. The effect of vertebral number variation on carcass weight and carcass length was estimated by general linear model. Further, the polymorphic sites of Vertnin ( VRTN ) gene were identified by sequencing, and the association of the genotype and vertebral number variation was analyzed by the one-way analysis of variance model. The variation of thoracolumbar vertebrae number in Kazakh sheep (18 to 20) was smaller than that in Texel sheep (17 to 21). The individuals with 19 thoracolumbar vertebrae (T13L6) were dominant in Kazakh sheep (79.2%). The association study showed that the numbers of thoracolumbar vertebrae were positively correlated with the carcass length and carcass weight, statistically significant with carcass length. To investigate the association of thoracolumbar vertebrae number with VRTN gene, we genotyped the VRTN gene. A total of 9 polymorphic sites were detected and only a single nucleotide polymorphism (SNP) (rs426367238) was suggested to associate with thoracic vertebral number statistically. The variation of thoracolumbar vertebrae number positively associated with the carcass length and carcass weight, especially with the carcass length. VRTN gene polymorphism of the SNP (rs426367238) with significant effect on thoracic vertebral number could be as a candidate marker to further evaluate its role in influence of thoracolumbar vertebral number.

Synchrotron-based measurement of the impact of thermal cycling on the evolution of stresses in Cu through-silicon vias

DOE Office of Scientific and Technical Information (OSTI.GOV)

Okoro, Chukwudi, E-mail: chukwudi.okoro@nist.gov; Obeng, Yaw; Levine, Lyle E.

2014-06-28

One of the main causes of failure during the lifetime of microelectronics devices is their exposure to fluctuating temperatures. In this work, synchrotron-based X-ray micro-diffraction is used to study the evolution of stresses in copper through-silicon via (TSV) interconnects, “as-received” and after 1000 thermal cycles. For both test conditions, significant fluctuations in the measured normal and shear stresses with depth are attributed to variations in the Cu grain orientation. Nevertheless, the mean hydrostatic stresses in the “as-received” Cu TSV were very low, at (16 ± 44) MPa, most likely due to room temperature stress relaxation. In contrast, the mean hydrostatic stresses alongmore » the entire length of the Cu TSV that had undergone 1000 thermal cycles (123 ± 37) MPa were found to be eight times greater, which was attributed to increased strain-hardening. The evolution in stresses with thermal cycling is a clear indication that the impact of Cu TSVs on front-end-of-line (FEOL) device performance will change through the lifetime of the 3D stacked dies, and ought to be accounted for during FEOL keep-out-zone design rules development.« less

25-Hydroxyvitamin D and Long Menstrual Cycles in a Prospective Cohort Study.

PubMed

Jukic, Anne Marie Z; Wilcox, Allen J; McConnaughey, D Robert; Weinberg, Clarice R; Steiner, Anne Z

2018-05-01

Vitamin D insufficiency is associated with subfertility and prolonged estrus cycles in animals, but humans have not been well studied. A prospective time-to-pregnancy study, Time to Conceive (2010-2015), collected up to 4 months of daily diary data. Participants were healthy, late reproductive-aged women in North Carolina who were attempting pregnancy. We examined menstrual cycle length as a continuous variable and in categories: long (35+ days) and short (≤25 days). Follicular phase length and luteal phase length were categorized as long (18+ days) or short (≤10 days). We estimated associations between those lengths and serum 25-hydroxyvitamin D (25[OH]D) using linear mixed models and marginal models. There were 1,278 menstrual cycles from 446 women of whom 5% were vitamin D deficient (25[OH]D, <20 ng/ml), 69% were between 20 and 39 ng/ml, and 26% were 40 ng/ml or higher. There was a dose-response association between vitamin D levels and cycle length. Compared with the highest 25(OH)D level (≥40 ng/ml), 25(OH)D deficiency was associated with almost three times the odds of long cycles (adjusted odds ratio [aOR] = 2.8 [95% confidence interval (CI) = 1.0, 7.5]). The aOR was 1.9 (1.1, 3.5) for 20 to <30 ng/ml. The probability of a long follicular phase and the probability of a short luteal phase both increased with decreasing 25(OH)D. Lower levels of 25(OH)D are associated with longer follicular phase and an overall longer menstrual cycle. Our results are consistent with other evidence supporting vitamin D's role in the reproductive axis, which may have broader implications for reproductive success.

Perfluoroalkyl Chemicals, Menstrual Cycle Length, and Fecundity: Findings from a Prospective Pregnancy Study

PubMed Central

Lum, Kirsten J.; Sundaram, Rajeshwari; Barr, Dana Boyd; Louis, Thomas A.; Louis, Germaine M. Buck

2016-01-01

Background Perfluoroalkyl substances have been associated with changes in menstrual cycle characteristics and fecundity, when modeled separately. However, these outcomes are biologically related, and we evaluate their joint association with exposure to perfluoroalkyl substances. Methods We recruited 501 couples from Michigan and Texas in 2005-2009 upon their discontinuing contraception and followed them until pregnancy or 12 months of trying. Female partners provided a serum sample upon enrollment and completed daily journals on menstruation, intercourse, and pregnancy test results. We measured seven perfluoroalkyl substances in serum using liquid-chromatography-tandem mass spectrometry. We assessed the association between perfluoroalkyl substances and menstrual cycle length using accelerated failure time models and between perfluoroalkyl substances and fecundity using a Bayesian joint modeling approach to incorporate cycle length. Results Menstrual cycles were 3% longer comparing women in the second versus first tertile of perfluorodecanoate (PFDeA; acceleration factor [AF]=1.03, 95% credible interval [CrI]=[1.00, 1.05]), but 2% shorter for women in the highest versus lowest tertile of perfluorooctanoic acid (PFOA) (AF=0.98, 95% CrI=[0.96, 1.00]). When accounting for cycle length, relevant covariates and remaining perfluoroalkyl substances, the probability of pregnancy was lower for women in second versus first tertile of PFNA (odds ratio [OR]=0.6, 95% CrI=[0.4, 1.0]) though not when comparing the highest versus lowest (OR=0.7, 95% CrI=[0.3, 1.1]) tertile. Conclusions In this prospective cohort study, we observed associations between two perfluoroalkyl substances and menstrual cycle length changes, and between select perfluoroalkyl substances and diminished fecundity at some (but not all) concentrations. PMID:27541842

Mind the cell: Seasonal variation in telomere length mirrors changes in leucocyte profile.

PubMed

Beaulieu, Michaël; Benoit, Laure; Abaga, Steven; Kappeler, Peter M; Charpentier, Marie J E

2017-10-01

Leucocytes are typically considered as a whole in studies examining telomere dynamics in mammals. Such an approach may be precarious, as leucocytes represent the only nucleated blood cells in mammals, their composition varies temporally, and telomere length differs between leucocyte types. To highlight this limitation, we examined here whether seasonal variation in leucocyte composition was related to variation in telomere length in free-ranging mandrills (Mandrilllus sphinx). We found that the leucocyte profile of mandrills varied seasonally, with lower lymphocyte proportion being observed during the long dry season presumably because of the combined effects of high nematode infection and stress at that time of the year. Interestingly, this low lymphocyte proportion during the long dry season was associated with shorter telomeres. Accordingly, based on longitudinal data, we found that seasonal changes in lymphocyte proportion were reflected by corresponding seasonal variation in telomere length. Overall, these results suggest that variation in lymphocyte proportion in blood can significantly affect telomere measurements in mammals. However, lymphocyte proportion did not entirely explain variation in telomere length. For instance, a lower lymphocyte proportion with age could not fully explain shorter telomeres in older individuals. Overall, our results show that telomere length and leucocyte profile are strongly although imperfectly intertwined, which may obscure the relationship between telomere dynamics and ageing processes in mammals. © 2017 John Wiley & Sons Ltd.

Variation of fluorescence spectroscopy during the menstrual cycle

NASA Astrophysics Data System (ADS)

Macaulay, Calum; Richards-Kortum, Rebecca; Utzinger, Urs; Fedyk, Amanda; Neely Atkinson, E.; Cox, Dennis; Follen, Michele

2002-06-01

Cervical autofluorescence has been demonstrated to have potential for real-time diagnosis. Inter-patient and intra-patient variations in fluorescence intensity have been measured. Inter-patient measurements may vary by a factor of ten, while intra-patient measurements may vary by a factor of two. Age and menopausal status have been demonstrated to account for some of the variations, while race and smoking have not. In order to explore in detail the role of the menstrual cycle in intra-patient variation, a study was designed to measure fluorescence excitation emission matrices (EEMs) in patients daily throughout one cycle. Ten patients with a history of normal menstrual cycles and normal Papanicolaou smears underwent daily measurements of fluorescence EEMs from three colposcopically normal sites throughout one menstrual cycle. Changes in signals from porphyrin, NADH, and FAD fluorescence and blood absorption were noted when the data was viewed in a graphical format. Visually interpreted features of the EEMs in this graphical format did not appear to correlate with the day of the menstrual cycle with the exception that blood absorption features were more prominent during the menstrual phase (during which bleeding occurs), suggesting that measurements during the menstrual phase should be avoided. Variations in cycle date likely do not account for inter- or intra-patient variations.

The solar cycle; Proceedings of the National Solar Observatory/Sacramento Peak 12th Summer Workshop, Sunspot, NM, Oct. 15-18, 1991

NASA Technical Reports Server (NTRS)

Harvey, Karen L. (Editor)

1992-01-01

Attention is given to a flux-transport model, the effect of fractal distribution on the evolution of solar surface magnetic fields, active nests on the sun, magnetic flux transport in solar active regions, recent advances in stellar cycle research, magnetic intermittency on the sun, a search for existence of large-scale motions on the sun, and new solar cycle data from the NASA/NSO spectromagnetograph. Attention is also given to the solar cycle variation of coronal temperature during cycle 22, the distribution of the north-south asymmetry for the various activity cycles, solar luminosity variation, a two-parameter model of total solar irradiance variation over the solar cycle, the origin of the solar cycle, nonlinear feedbacks in the solar dynamo, and long-term dynamics of the solar cycle.

Menstrual cycle characteristics as determinants of plasma concentrations of perfluoroalkyl substances (PFASs) in the Norwegian Mother and Child Cohort (MoBa study).

PubMed

Singer, Alison B; Whitworth, Kristina W; Haug, Line S; Sabaredzovic, Azemira; Impinen, Antti; Papadopoulou, Eleni; Longnecker, Matthew P

2018-06-04

Perfluoroalkyl substances (PFASs) are fluorinated organic compounds that have been used in a variety of industrial and consumer applications. Menstruation is implicated as a possible route of elimination for PFASs in women. The overall purpose of this study was to examine menstrual cycle characteristics as determinants of plasma PFAS concentrations in women. Our study sample consisted of 1977 pregnant women from the Norwegian Mother and Child Cohort (MoBa) study. The women were asked about menstrual cycle regularity in the year before the pregnancy and typical menstrual cycle length as well as other demographic and reproductive characteristics in a questionnaire completed during the pregnancy. Blood samples were collected around 17-18 weeks gestation and PFAS concentrations were measured in plasma. We examined the association between menstrual cycle characteristics and seven PFASs (perfluorooctanoic acid (PFOA), perfluorononanoic acid (PFNA), perfluorodecanoic acid (PFDA), perfluoroundecanoic acid (PFUnDA), perfluorohexane sulfonate (PFHxS), perfluoroheptane sulfonate (PFHpS), and perfluorooctane sulfonate (PFOS)) using multiple linear regression, adjusted for age, pre-pregnancy body mass index, smoking, education, income, parity, oral contraceptive use, inter-pregnancy interval, and breastfeeding duration. Irregular cycles were not associated with PFAS concentrations. Overall, we found no evidence of associations between menstrual cycle length and PFAS concentrations. In subgroup analyses we found some evidence, among parous women, of decreased PFHpS and PFOS with short menstrual cycles; we also found, among recent OC users (in the 12 months before the questionnaire) increased PFNA and PFUnDA with long cycle length. Limitations of our study include misclassification of menstrual cycle characteristics, small sample sizes in the sub-group analyses, and a lack of information on duration and volume of menses. In the entire study sample, we found little evidence of menstrual cycle characteristics as determinants of PFAS concentrations. However, we observed some associations between cycle length and PFAS concentrations with some select PFAS compounds in subgroup analyses. Copyright © 2018 Elsevier Inc. All rights reserved.

Stellar activity cycles from long-term data by robotic telescopes

NASA Astrophysics Data System (ADS)

Oláh, K.

2014-03-01

All results about stellar activity cycles stem from decades-long systematic observations that were done by small telescopes. Without these equipments we would not know much, if anything, about stellar activity cycles, like those we see and observe easily on the nearest star, the Sun. In the early 80's of the last century systematic photometric monitoring of active stars began with automated photometric telescopes (APTs), some of which continue the observations to date. The Vienna-Potsdam APT now works for about two decades (Strassmeier et al. 1997), similarly to the 4-College Consortium APT (Dukes et al. 1995), while the Catania APT (Rodono et al. 2001) was closed down a few years ago. These small tools with the same setups for decades do not cost much and are relatively cheap to maintain. The longest continuous photometric datasets of a few objects from APTs span now over 30 years, which, together with earlier, manually-obtained data allow to study those activity cycles of stars which are in the order of 10 years or shorter: to be sure in the timescale of a cycle it should be observed repeatedly at least 2-3 times. The spectroscopic automated telescope STELLA (Strassmeier et al. 2004), built in the first decade of this century, measured already a few dozens of radial velocity curves for long-period binary stars and measured their activity levels (Strassmeier et al. 2012); these results can be gathered only by robotic telescopes. Only with STELLA it is possible to study the decades-long behavior of starspots on active giants with long rotational periods via Doppler Imaging. As the databases were growing it became clear that stars, just as the Sun, had multiple cycles. It was also found that stellar cycles showed systematic changes and that the cycle lengths correlated with the rotational periods of the stars. Extensive summaries of stellar activity cycles are found in Baliunas et al. (1995) using the Mt. Wilson Ca-index survey, and Oláh et al. (2009) based on automated photometry+manual data from the literature, resulting in the detection of positive correlation between the rotational rates and cycle length(s) in the sense that faster rotating stars have shorter cycle(s). The long-term, B-V and U-B color index changes of active stars were thoroughly studied by Messina (2008). Direct connection between the magnetic behavior and the orbit of a system containing an active star is seldom observed; such examples are presented by Strassmeier et al. (2011) and Oláh et al. (2013). Based on the data from the DASCH (Digital Access to a Sky Century at Harvard) project, three active K-giants' long-term variability on the timescale of decades to 100 years have beed discovered by Tang et al. (2010). The ASAS database was used to study the cyclic behavior of field M-dwarf stars by Savanov (2012) who found no correlation between the rotation rates and cycle lengths of these objects, suggesting a different type of dynamo to those that drive the dynamo in the RS CVn systems and related active stars, e.g., in Oláh et al. (2009). Recently, Vida & Oláh (2013) determined cycles on the timescale of a year on fast rotating, late-type dwarf stars measured by the Kepler space telescope. However, despite the extremely high precision and time cadence, the Kepler data do not allow to study very long- term phenomena, such as the activity cycles of solar-like stars, due to the limited lifetime of the mission. One of the most important factors in studying stellar activity cycles is time, which cannot be overtaken by any means. It needs systematic, uninterrupted observations for dozens of years, preferably with the same instrument, to avoid systematic effects in the observed long-term variations. Another point is that most of the known magnetically active stars are quite bright objects needing a small telescope to be observed. The construction of automated photometric and spectroscopic telescopes is one of the major, and at the same time low-cost, investments in astronomy. These telescopes and their equipments should be preserved and used as long as possible, replaced when necessary, but never closed down.

Analysis of Co-spatial UV-Optical STIS Spectra of Six Planetary Nebulae From HST Cycle 19 GO 12600

NASA Astrophysics Data System (ADS)

Reid Miller, Timothy; Henry, Richard B. C.; Dufour, Reginald J.; Kwitter, Karen; Shaw, Richard A.; Balick, Bruce; Corradi, Romano

2015-08-01

We present an analysis of six spatially resolved planetary nebulae (PNe), NGC 3242, NGC 5315, NGC5882, NGC 7662, IC 2165, and IC 3568, from observations in the Cycle 19 program GO 12600 using HSTSTIS. These six observations cover the wavelength range 1150-10,270 Å with 0.2 and 0.5 arcsec wideslits, and are co-spatial to 0.1 arcsec along a 25 arcsec length across each nebula. The wavelength andspatial coverage enabled this detailed study of physical conditions and abundances from UV and opticalline emissions (compared to only optical lines) for these six PNe. The first UV lines of interest are thoseof carbon. The resolved lines of C III] 1906.68 and 1908.73 yielded a direct measurement of the densitywithin the volume occupied by doubly-ionized carbon and other similar co-spatial ions as well ascontributed to an accurate measurement of the carbon abundance. Each PN spectrum was divided intosmaller spatial regions in order to assess inferred density variations among the regions along the entireslit. There is a clear difference in the inferred density for several regions of each PNe. Variations inelectron temperature and chemical abundances were also probed and shown to be nearly completelyhomogeneous within the errors. Lastly, these nebulae were modeled in detail with the photoionizationcode CLOUDY. This modeling tested different density profiles in order to reproduce the observed densityvariations and temperature fluctuations, and constrain central star parameters. We gratefullyacknowledge generous support from NASA through grants related to the Cycle 19 program GO 12600, aswell as from the University of Oklahoma.

S-phase duration is the main target of cell cycle regulation in neural progenitors of developing ferret neocortex.

PubMed

Turrero García, Miguel; Chang, YoonJeung; Arai, Yoko; Huttner, Wieland B

2016-02-15

The evolutionary expansion of the neocortex primarily reflects increases in abundance and proliferative capacity of cortical progenitors and in the length of the neurogenic period during development. Cell cycle parameters of neocortical progenitors are an important determinant of cortical development. The ferret (Mustela putorius furo), a gyrencephalic mammal, has gained increasing importance as a model for studying corticogenesis. Here, we have studied the abundance, proliferation, and cell cycle parameters of different neural progenitor types, defined by their differential expression of the transcription factors Pax6 and Tbr2, in the various germinal zones of developing ferret neocortex. We focused our analyses on postnatal day 1, a late stage of cortical neurogenesis when upper-layer neurons are produced. Based on cumulative 5-ethynyl-2'-deoxyuridine (EdU) labeling as well as Ki67 and proliferating cell nuclear antigen (PCNA) immunofluorescence, we determined the duration of the various cell cycle phases of the different neocortical progenitor subpopulations. Ferret neocortical progenitors were found to exhibit longer cell cycles than those of rodents and little variation in the duration of G1 among distinct progenitor types, also in contrast to rodents. Remarkably, the main difference in cell cycle parameters among the various progenitor types was the duration of S-phase, which became shorter as progenitors progressively changed transcription factor expression from patterns characteristic of self-renewal to those of neuron production. Hence, S-phase duration emerges as major target of cell cycle regulation in cortical progenitors of this gyrencephalic mammal. © 2015 The Authors The Journal of Comparative Neurology Published by Wiley Periodicals, Inc.

Relative Radiation Density and Temperature Distribution of Rocket Flames

DTIC Science & Technology

1951-07-10

traversed along the axis of the flame image to determine the flame length and the position of the Mach nodes. Other traverses were made across the...variation is due to different stages of flame growth. Other variations especially those of 2 6• flame length , can be accounted for by dif- U L L ference...The temperature gradient is considerably less at the tip of the flame and by similar reasoning would give greater variation in flame length . The problem

Modelling low pathogenic avian influenza introduction into the commercial poultry industry.

PubMed

Barnes, Belinda; Glass, Kathryn

2018-06-01

Outbreaks of highly pathogenic avian influenza (HPAI) in commercial poultry flocks are rare but highly disruptive to the industry. There is evidence that low pathogenic avian influenza (LPAI) can transfer from wild birds to domestic flocks, where it may mutate to HPAI, and the industry is concerned that an increasing demand for free-range produce may affect the risk of LPAI and HPAI outbreaks. In this paper we focus on LPAI introduction and establishment, and formulate a branching process model to compare risk between sectors and their contribution to overall industry-level risk. Our aim is to determine how heterogeneity in avian influenza viruses and the distinct population structures of each sector - caged, barn and free-range, meat and layer - interact with a continuous risk of virus introduction to affect outbreak probabilities. We show that free-range access is the most influential driver of LPAI outbreaks, with production cycle length having relatively little effect. We demonstrate that variation in virus transmission rates is particularly important when modelling avian influenza introduction to domestic poultry. Virus-free status is of interest for biosecurity and we distinguish how it differs from the usual probability of extinction, and discuss how production cycle length affects this difference. We also use the nonlinear relationship between shed size and risk to identify conditions for which shed size is most influential. Copyright © 2018 Elsevier Inc. All rights reserved.

The Limits on Trypanosomatid Morphological Diversity

PubMed Central

Wheeler, Richard John; Gluenz, Eva; Gull, Keith

2013-01-01

Cell shape is one, often overlooked, way in which protozoan parasites have adapted to a variety of host and vector environments and directional transmissions between these environments. Consequently, different parasite life cycle stages have characteristic morphologies. Trypanosomatid parasites are an excellent example of this in which large morphological variations between species and life cycle stage occur, despite sharing well-conserved cytoskeletal and membranous structures. Here, using previously published reports in the literature of the morphology of 248 isolates of trypanosomatid species from different hosts, we perform a meta-analysis of the occurrence and limits on morphological diversity of different classes of trypanosomatid morphology (trypomastigote, promastigote, etc.) in the vertebrate bloodstream and invertebrate gut environments. We identified several limits on cell body length, cell body width and flagellum length diversity which can be interpreted as biomechanical limits on the capacity of the cell to attain particular dimensions. These limits differed for morphologies with and without a laterally attached flagellum which we suggest represent two morphological superclasses, the ‘juxtaform’ and ‘liberform’ superclasses. Further limits were identified consistent with a selective pressure from the mechanical properties of the vertebrate bloodstream environment; trypanosomatid size showed limits relative to host erythrocyte dimensions. This is the first comprehensive analysis of the limits of morphological diversity in any protozoan parasite, revealing the morphogenetic constraints and extrinsic selection pressures associated with the full diversity of trypanosomatid morphology. PMID:24260255

Modeling spatially localized photonic nanojets from phase diffraction gratings

DOE Office of Scientific and Technical Information (OSTI.GOV)

Geints, Yu. E., E-mail: ygeints@iao.ru; Tomsk State University, 36, Lenina Avenue, Tomsk 634050; Zemlyanov, A. A.

2016-04-21

We investigated numerically the specific spatially localized intense optical structure, a photonic nanojet (PNJ), formed in the near-field scattering of optical radiation at phase diffraction gratings. The finite-difference time-domain technique was employed to study the PNJ key parameters (length, width, focal distance, and intensity) produced by diffraction gratings with the saw-tooth, rectangle, and hemispheric line profiles. Our analysis showed that each type of diffraction gratings produces a photonic jet with unique characteristics. Based on the numerical calculations, we demonstrate that the PNJ could be manipulated in a wide range through the variation of period, duty cycle, and shape of diffractionmore » grating rulings.« less

Distribution of shortest cycle lengths in random networks

NASA Astrophysics Data System (ADS)

Bonneau, Haggai; Hassid, Aviv; Biham, Ofer; Kühn, Reimer; Katzav, Eytan

2017-12-01

We present analytical results for the distribution of shortest cycle lengths (DSCL) in random networks. The approach is based on the relation between the DSCL and the distribution of shortest path lengths (DSPL). We apply this approach to configuration model networks, for which analytical results for the DSPL were obtained before. We first calculate the fraction of nodes in the network which reside on at least one cycle. Conditioning on being on a cycle, we provide the DSCL over ensembles of configuration model networks with degree distributions which follow a Poisson distribution (Erdős-Rényi network), degenerate distribution (random regular graph), and a power-law distribution (scale-free network). The mean and variance of the DSCL are calculated. The analytical results are found to be in very good agreement with the results of computer simulations.

Seasonal and interannual variations of atmospheric CO2 and climate

NASA Astrophysics Data System (ADS)

Dettinger, Michael D.; Ghil, Michael

1998-02-01

Interannual variations of atmospheric CO2 concentrations at Mauna Loa are almost masked by the seasonal cycle and a strong trend; at the South Pole, the seasonal cycle is small and is almost lost in the trend and interannual variations. Singular-spectrum analysis (SSA) is used here to isolate and reconstruct interannual signals at both sites and to visualize recent decadal changes in the amplitude and phase of the seasonal cycle. Analysis of the Mauna Loa CO2 series illustrates a hastening of the CO2 seasonal cycle, a close temporal relation between Northern Hemisphere (NH) mean temperature trends and the amplitude of the seasonal CO2 cycle, and tentative ties between the latter and seasonality changes in temperature over the NH continents. Variations of the seasonal CO2 cycle at the South Pole differ from those at Mauna Loa: it is phase changes of the seasonal cycle at the South Pole, rather than amplitude changes, that parallel hemispheric and global temperature trends. The seasonal CO2 cycles exhibit earlier occurrences of the seasons by 7days at Mauna Loa and 18days at the South Pole. Interannual CO2 variations are shared at the two locations, appear to respond to tropical processes, and can be decomposed mostly into two periodicities, around (3years)1 and (4years)1, respectively. Joint SSA analyses of CO2 concentrations and tropical climate indices isolate a shared mode with a quasi-triennial (QT) period in which the CO2 and sea-surface temperature (SST) participation are in phase opposition. The other shared mode has a quasi-quadrennial (QQ) period and CO2 variations are in phase with the corresponding tropical SST variations throughout the tropics. Together these interannual modes exhibit a mean lag between tropical SSTs and CO2 variations of about 6 8months, with SST leading. Analysis of the QT and QQ signals in global gridded SSTs, joint SSA of CO2 and δ13C isotopic ratios, and SSA of CO2 and NH-land temperatures indicate that the QT variations in CO2 mostly reflect upwelling variations in the eastern tropical Pacific. QQ variations are dominated by the CO2 signature of terrestrial-ecosystem response to global QQ climate variations. Climate variations associated with these two interannual components of tropical variability have very different effects on global climate and, especially, on terrestrial ecosystems and the carbon cycle.

Newly found evidence of Sun-climate relationships

NASA Technical Reports Server (NTRS)

Kim, Hongsuk H.; Huang, Norden E.

1993-01-01

Solar radiation cycles drive climatic changes intercyclically. These interdecadal changes were detected as variations in solar total irradiances over the time period of recorded global surface-air-temperature (SAT) and have been restored utilizing Earth Radiation Budget Channel 10C measurements (1978-1990), Greenwich Observatory faculae data (1874-1975), and Taipei Observatory Active Region data (1964-1991). Analysis of the two separate events was carried out by treating each as a discrete time series determined by the length of each solar cycle. The results show that the global SAT responded closely to the input of solar cyclical activities, S, with a quantitative relation of T = 1.62 * S with a correlation coefficient of 0.61. This correlation peaks at 0.71 with a built-in time lag of 32 months in temperature response. Solar forcing in interannual time scale was also detected and the derived relationship of T = 0.17 * S with a correlation coefficient of 0.66 was observed. Our analysis shows derived climate sensitivities approximately fit the theoretical feedback slope, 4T(sup 3).

Bipartite life cycle of coral reef fishes promotes increasing shape disparity of the head skeleton during ontogeny: an example from damselfishes (Pomacentridae)

PubMed Central

2011-01-01

Background Quantitative studies of the variation of disparity during ontogeny exhibited by the radiation of coral reef fishes are lacking. Such studies dealing with the variation of disparity, i.e. the diversity of organic form, over ontogeny could be a first step in detecting evolutionary mechanisms in these fishes. The damselfishes (Pomacentridae) have a bipartite life-cycle, as do the majority of demersal coral reef fishes. During their pelagic dispersion phase, all larvae feed on planktonic prey. On the other hand, juveniles and adults associated with the coral reef environment show a higher diversity of diets. Using geometric morphometrics, we study the ontogenetic dynamic of shape disparity of different head skeletal units (neurocranium, suspensorium and opercle, mandible and premaxilla) in this fish family. We expected that larvae of different species might be relatively similar in shapes. Alternatively, specialization may become notable even in the juvenile and adult phase. Results The disparity levels increase significantly throughout ontogeny for each skeletal unit. At settlement, all larval shapes are already species-specific. Damselfishes show high levels of ontogenetic allometry during their post-settlement growth. The divergence of allometric patterns largely explains the changes in patterns and levels of shape disparity over ontogeny. The rate of shape change and the length of ontogenetic trajectories seem to be less variable among species. We also show that the high levels of shape disparity at the adult stage are correlated to a higher level of ecological and functional diversity in this stage. Conclusion Diversification throughout ontogeny of damselfishes results from the interaction among several developmental novelties enhancing disparity. The bipartite life-cycle of damselfishes exemplifies a case where the variation of environmental factors, i.e. the transition from the more homogeneous oceanic environment to the coral reef offering a wide range of feeding habits, promotes increasing shape disparity of the head skeleton over the ontogeny of fishes. PMID:21450094

A proposal for unification of fatigue crack growth law

NASA Astrophysics Data System (ADS)

Kobelev, V.

2017-05-01

In the present paper, the new fractional-differential dependences of cycles to failure for a given initial crack length upon the stress amplitude in the linear fracture approach are proposed. The anticipated unified propagation function describes the infinitesimal crack length growths per increasing number of load cycles, supposing that the load ratio remains constant over the load history. Two unification fractional-differential functions with different number of fitting parameters are proposed. An alternative, threshold formulations for the fractional-differential propagation functions are suggested. The mean stress dependence is the immediate consequence from the considered laws. The corresponding formulas for crack length over the number of cycles are derived in closed form.

Haplotype Variation of Flowering Time Genes of Sugar Beet and Its Wild Relatives and the Impact on Life Cycle Regimes.

PubMed

Höft, Nadine; Dally, Nadine; Hasler, Mario; Jung, Christian

2017-01-01

The species Beta vulgaris encompasses wild and cultivated members with a broad range of phenological development. The annual life cycle is commonly found in sea beets (ssp. maritima ) from Mediterranean environments which germinate, bolt, and flower within one season under long day conditions. Biennials such as the cultivated sugar beet ( B. vulgaris ssp. vulgaris ) as well as sea beets from northern latitudes require prolonged exposure to cold temperature over winter to acquire floral competence. Sugar beet is mainly cultivated for sugar production in Europe and is likely to have originated from sea beet. Flowering time strongly affects seed yield and yield potential and is thus a trait of high agronomic relevance. Besides environmental cues, there are complex genetic networks known to impact life cycle switch in flowering plants. In sugar beet, BTC1, BvBBX19, BvFT1 , and BvFT2 are major flowering time regulators. In this study, we phenotyped plants from a diversity Beta panel encompassing cultivated and wild species from different geographical origin. Plants were grown under different day length regimes with and without vernalization. Haplotype analysis of BTC1, BvBBX19, BvFT1 , and BvFT2 was performed to identify natural diversity of these genes and their impact on flowering. We found that accessions from northern latitudes flowered significantly later than those from southern latitudes. Some plants did not flower at all, indicating a strong impact of latitude of origin on life cycle. Haplotype analysis revealed a high conservation of the CCT-, REC-, BBX-, and PEBP-domains with regard to SNP occurrence. We identified sequence variation which may impact life cycle adaptation in beet. Our data endorse the importance of BTC1 in the domestication process of cultivated beets and contribute to the understanding of distribution and adaption of Beta species to different life cycle regimes in response to different environments. Moreover, our data provide a resource for haplotypes identified for the major floral regulators in beet.

Circadian and estrous cycle-dependent variations in blood pressure and heart rate in female rats.

PubMed

Takezawa, H; Hayashi, H; Sano, H; Saito, H; Ebihara, S

1994-11-01

To determine whether cardiovascular functions are controlled by the endogenous circadian system and whether they change with the estrous cycle in female rats, we measured mean arterial pressure (MAP), heart rate (HR), and spontaneous activity (ACT) of female rats using an implantable radiotelemetry device and a computerized data-collecting system. Under a 12:12-h light-dark (LD) cycle, these parameters exhibited daily rhythms that were entrained to the photic cycle. The patterns of the daily rhythms varied with estrous cycles, and variations were particularly marked in the proestrous stage. During the dark period of this stage, ACT levels were significantly higher, but HR was significantly lower than in other stages. Although the peak MAP occurred within 2 h after the onset of the dark phase in three of the estrous stages, it occurred around midnight in the proestrous stage. Such estrous cycle-dependent variations were eliminated by ovariectomy. The implantation of 17 beta-estradiol produced a gradual increase in MAP and an abrupt decrease in HR. During constant darkness, all three parameters were free running, maintaining the same internal phase relationships with each other as during LD cycles. These results indicate that daily variations in these parameters were controlled by the endogenous circadian oscillating system, that they vary with the estrous cycle in female rats, and that estrogen may be responsible for these estrous cycle-dependent variations.

Effect of operational cycle time length on nitrogen removal in an alternating oxidation ditch system.

PubMed

Mantziaras, I D; Stamou, A; Katsiri, A

2011-06-01

This paper refers to nitrogen removal optimization of an alternating oxidation ditch system through the use of a mathematical model and pilot testing. The pilot system where measurements have been made has a total volume of 120 m(3) and consists of two ditches operating in four phases during one cycle and performs carbon oxidation, nitrification, denitrification and settling. The mathematical model consists of one-dimensional mass balance (convection-dispersion) equations based on the IAWPRC ASM 1 model. After the calibration and verification of the model, simulation system performance was made. Optimization is achieved by testing operational cycles and phases with different time lengths. The limits of EU directive 91/271 for nitrogen removal have been used for comparison. The findings show that operational cycles with smaller time lengths can achieve higher nitrogen removals and that an "equilibrium" between phase time percentages in the whole cycle, for a given inflow, must be achieved.

Health impact assessment of cycling network expansions in European cities.

PubMed

Mueller, Natalie; Rojas-Rueda, David; Salmon, Maëlle; Martinez, David; Ambros, Albert; Brand, Christian; de Nazelle, Audrey; Dons, Evi; Gaupp-Berghausen, Mailin; Gerike, Regine; Götschi, Thomas; Iacorossi, Francesco; Int Panis, Luc; Kahlmeier, Sonja; Raser, Elisabeth; Nieuwenhuijsen, Mark

2018-04-01

We conducted a health impact assessment (HIA) of cycling network expansions in seven European cities. We modeled the association between cycling network length and cycling mode share and estimated health impacts of the expansion of cycling networks. First, we performed a non-linear least square regression to assess the relationship between cycling network length and cycling mode share for 167 European cities. Second, we conducted a quantitative HIA for the seven cities of different scenarios (S) assessing how an expansion of the cycling network [i.e. 10% (S1); 50% (S2); 100% (S3), and all-streets (S4)] would lead to an increase in cycling mode share and estimated mortality impacts thereof. We quantified mortality impacts for changes in physical activity, air pollution and traffic incidents. Third, we conducted a cost-benefit analysis. The cycling network length was associated with a cycling mode share of up to 24.7% in European cities. The all-streets scenario (S4) produced greatest benefits through increases in cycling for London with 1,210 premature deaths (95% CI: 447-1,972) avoidable annually, followed by Rome (433; 95% CI: 170-695), Barcelona (248; 95% CI: 86-410), Vienna (146; 95% CI: 40-252), Zurich (58; 95% CI: 16-100) and Antwerp (7; 95% CI: 3-11). The largest cost-benefit ratios were found for the 10% increase in cycling networks (S1). If all 167 European cities achieved a cycling mode share of 24.7% over 10,000 premature deaths could be avoided annually. In European cities, expansions of cycling networks were associated with increases in cycling and estimated to provide health and economic benefits. Copyright © 2018 Elsevier Inc. All rights reserved.

Investigation of the effects of manufacturing variations and materials on fatigue crack detection methods in gear teeth

NASA Technical Reports Server (NTRS)

Wheitner, Jeffrey A.; Houser, Donald R.

1994-01-01

The fatigue life of a gear tooth can be thought of as the sum of the number of cycles required to initiate a crack, N(sub i), plus the number of cycles required to propagate the crack to such a length that fracture occurs, N(sub p). The factors that govern crack initiation are thought to be related to localized stress or strain at a point, while propagation of a fatigue crack is a function of the crack tip parameters such as crack shape, stress state, and stress intensity factor. During a test there is no clear transition between initiation and propagation. The mechanisms of initiation and propagation are quite different and modeling them separately produces a higher degree of accuracy, but then the question that continually arises is 'what is a crack?' The total life prediction in a fracture mechanics model presently hinges on the assumption of an initial crack length, and this length can significantly affect the total life prediction. The size of the initial crack is generally taken to be in the range of 0.01 in. to 0.2 in. Several researchers have used various techniques to determine the beginning of the crack propagation stage. Barhorst showed the relationship between dynamic stiffness changes and crack propagation. Acoustic emissions, which are stress waves produced by the sudden movement of stressed materials, have also been successfully used to monitor the growth of cracks in tensile and fatigue specimens. The purpose of this research is to determine whether acoustic emissions can be used to define the beginning of crack propagation in a gear using a single-tooth bending fatigue test.

Statistical variability study of random dopant fluctuation on gate-all-around inversion-mode silicon nanowire field-effect transistors

NASA Astrophysics Data System (ADS)

Yoon, Jun-Sik; Rim, Taiuk; Kim, Jungsik; Kim, Kihyun; Baek, Chang-Ki; Jeong, Yoon-Ha

2015-03-01

Random dopant fluctuation effects of gate-all-around inversion-mode silicon nanowire field-effect transistors (FETs) with different diameters and extension lengths are investigated. The nanowire FETs with smaller diameter and longer extension length reduce average values and variations of subthreshold swing and drain-induced barrier lowering, thus improving short channel immunity. Relative variations of the drain currents increase as the diameter decreases because of decreased current drivability from narrower channel cross-sections. Absolute variations of the drain currents decrease critically as the extension length increases due to decreasing the number of arsenic dopants penetrating into the channel region. To understand variability origins of the drain currents, variations of source/drain series resistance and low-field mobility are investigated. All these two parameters affect the variations of the drain currents concurrently. The nanowire FETs having extension lengths sufficient to prevent dopant penetration into the channel regions and maintaining relatively large cross-sections are suggested to achieve suitable short channel immunity and small variations of the drain currents.

On the level of skill in predicting maximum sunspot number - A comparative study of single variate and bivariate precursor techniques

NASA Technical Reports Server (NTRS)

Wilson, Robert M.

1990-01-01

The level of skill in predicting the size of the sunspot cycle is investigated for the two types of precursor techniques, single variate and bivariate fits, both applied to cycle 22. The present level of growth in solar activity is compared to the mean level of growth (cycles 10-21) and to the predictions based on the precursor techniques. It is shown that, for cycle 22, both single variate methods (based on geomagnetic data) and bivariate methods suggest a maximum amplitude smaller than that observed for cycle 19, and possibly for cycle 21. Compared to the mean cycle, cycle 22 is presently behaving as if it were a +2.6 sigma cycle (maximum amplitude of about 225), which means that either it will be the first cycle not to be reliably predicted by the combined precursor techniques or its deviation relative to the mean cycle will substantially decrease over the next 18 months.

Life cycle strategies of copepods in coastal upwelling zones

NASA Astrophysics Data System (ADS)

Peterson, W.

1998-06-01

Life cycles of copepods of coastal upwelling zones are of the multigenerational type—as many as 10 or more generations may be produced each year, depending upon water temperature, food concentration and length of the upwelling season. Abundant food resources and moderate temperature convey advantages to those copepods living in coastal upwelling zones, however, there is a clear disadvantage in that coastal upwelling zones are highly advective environments. Typically, water circulation patterns are such that surface waters are carried offshore, deeper waters carried onshore and most of the water column over the continental shelf is moving equatorward. The challenge to copepod species that inhabit upwelling systems is life cycle closure—how do eggs, nauplii, juveniles and adults avoid being swept out of these ecosystems in the face of persistent transport out of the system? In this review, I first list the species which dominate coastal upwelling ecosystems then discuss three variations on the multigenerational life cycle scheme that are observed in upwelling systems. The latter part of the review is devoted to discussion of how individuals are retained in the productive continental shelf waters within coastal upwelling ecosystems. The suggestion is made that the only copepod species that successfully achieve life cycle closure in such systems are those that are preadapted to upwelling circulation patterns. Our quantitative understanding of the relative importance of physical factors (such as advection) and biological factors (birth, growth, and mortality) on life cycle strategies and population dynamics is quite rudimentary. It would help our understanding if there were more field studies and more computer modeling studies that focused on seasonal cycles of abundance, development times and vertical distribution of life cycle stages, and measurements of water circulation patterns.

Performance and durability testing of parabolic trough receivers

NASA Astrophysics Data System (ADS)

Lei, Dongqiang; Fu, Xuqiang; Zhao, Dongming; Yuan, Guofeng; Wang, Zhifeng; Guo, Minghuan

2017-06-01

The paper describes the key performance and durability testing facilities of the parabolic trough receiver developed by Institute of Electrical Engineering, Chinese Academy of Sciences. The indoor heat loss test can be applied at 4-7 different temperature levels within 200-550 on receivers. The optical efficiency test bench consists of 12 metal halide lamps as the solar simulator and a 5 m length half-elliptical cylinder reflector with flat end reflectors. 3 ultra-precision temperature sensors are used in receiver each end to get the temperature difference. The residual gas analysis test bench is applied to analyze and predict the vacuum lifetime of the receiver. It can test the variations of composition and partial pressure of residual gases with temperature and time in the receiver annulus space by a high sensitivity quadrupole mass spectrometer gas analyzer. A coating accelerated ageing test bench, which is also used to test the thermal cycle, has been developed. This test bench uses the absorber tube of the recevier as the resistance heater to heat up the whole receiver. The coating lifetime can be predicted by the Arrhenius parameters. For the cycling test, the compressed air is used to directly cool the inner surface of the absorber tube. The thermal cycling test is performed with temperature cycles from 150 °C to 450 °C for 160 cycles. The maximum thermal cycling frequency is 8 cycles per day. The mechanical fatigue test bench is used to test the bellows and the glass-to-metal seals durability at the same time. Both bellows are expanded and compressed to 6.5 mm in turn with 10,000 cycles. A new rotating test bench was also developed to test the thermal efficiency of the receiver.

Modeling Menstrual Cycle Length and Variability at the Approach of Menopause Using Hierarchical Change Point Models

PubMed Central

Huang, Xiaobi; Elliott, Michael R.; Harlow, Siobán D.

2013-01-01

SUMMARY As women approach menopause, the patterns of their menstrual cycle lengths change. To study these changes, we need to jointly model both the mean and variability of cycle length. Our proposed model incorporates separate mean and variance change points for each woman and a hierarchical model to link them together, along with regression components to include predictors of menopausal onset such as age at menarche and parity. Additional complexity arises from the fact that the calendar data have substantial missingness due to hormone use, surgery, and failure to report. We integrate multiple imputation and time-to event modeling in a Bayesian estimation framework to deal with different forms of the missingness. Posterior predictive model checks are applied to evaluate the model fit. Our method successfully models patterns of women’s menstrual cycle trajectories throughout their late reproductive life and identifies change points for mean and variability of segment length, providing insight into the menopausal process. More generally, our model points the way toward increasing use of joint mean-variance models to predict health outcomes and better understand disease processes. PMID:24729638

Cardiac Cycle Dependent Left Atrial Dynamics: Implications for Catheter Ablation of Atrial Fibrillation

PubMed Central

Patel, Amit R.; Fatemi, Omid; Norton, Patrick T.; West, J. Jason; Helms, Adam S.; Kramer, Christopher M.; Ferguson, John D.

2008-01-01

Background Left atrial volume (LAV) determines prognosis and response to therapy in atrial fibrillation. Integration of electro-anatomical maps with 3D-images rendered from CT and MRI is used to facilitate atrial fibrillation ablation. Objectives We measured LAV changes and regional motion during the cardiac cycle that might affect the accuracy of image integration and determined their relationship to standard LAV measurements. Methods MRI was performed in thirty patients with paroxysmal atrial fibrillation. Left atrial time-volume curves were generated and used to divide the left atrial function (LAEF) into pumping (PEF) and conduit (CEF) fractions and to determine the maximum LAV (LAMAX) and the pre-atrial contraction volume (PACV). LAV was measured using an MRI angiogram and traditional geometric models from echocardiography (area-length and ellipsoid). The in-plane displacement of the pulmonary veins, anterior left atrium, mitral annulus, and left atrial appendage was measured. Results LAMAX was 107±36ml and occurred at 42±5% of the RR interval. PACV was 86 ±34ml and occurred at 81±4% of the RR interval. LAEF was 45±10% and PEF was 31±10%. LAV measurements made from the MRI angiogram, area-length and ellipsoid models underestimated LAMAX by 21±25ml, 16±26ml, and 35±22ml, respectively. The anterior LA, mitral annulus, and left atrial appendage were significantly displaced during the cardiac cycle (8.8±2.0mm, 13.2±3.8mm, and 10.2±3.4mm, respectively); the pulmonary veins were not. Conclusions LAV changes significantly during the cardiac cycle and substantial regional variation in left atrial motion exists. Standard measurements of left atrial volume significantly underestimate LAMAX when compared to the gold standard measure of 3D-volumetrics. PMID:18486563

Cardiac cycle-dependent left atrial dynamics: implications for catheter ablation of atrial fibrillation.

PubMed

Patel, Amit R; Fatemi, Omid; Norton, Patrick T; West, J Jason; Helms, Adam S; Kramer, Christopher M; Ferguson, John D

2008-06-01

Left atrial (LA) volume determines prognosis and response to therapy for atrial fibrillation. Integration of electroanatomic maps with three-dimensional images rendered from computed tomography and magnetic resonance imaging (MRI) is used to facilitate atrial fibrillation ablation. The purpose of this study was to measure LA volume changes and regional motion during the cardiac cycle that might affect the accuracy of image integration and to determine their relationship to standard LA volume measurements. MRI was performed in 30 patients with paroxysmal atrial fibrillation. LA time-volume curves were generated and used to divide LA ejection fraction into pumping ejection fraction and conduit ejection fraction and to determine maximum LA volume (LA(max)) and preatrial contraction volume. LA volume was measured using an MRI angiogram and traditional geometric models from echocardiography (area-length model and ellipsoid model). In-plane displacement of the pulmonary veins, anterior left atrium, mitral annulus, and LA appendage was measured. LA(max) was 107 +/- 36 mL and occurred at 42% +/- 5% of the R-R interval. Preatrial contraction volume was 86 +/- 34 mL and occurred at 81% +/- 4% of the R-R interval. LA ejection fraction was 45% +/- 10%, and pumping ejection fraction was 31% +/- 10%. LA volume measurements made from MRI angiogram, area-length model, and ellipsoid model underestimated LA(max) by 21 +/- 25 mL, 16 +/- 26 mL, and 35 +/- 22 mL, respectively. Anterior LA, mitral annulus, and LA appendage were significantly displaced during the cardiac cycle (8.8 +/- 2.0 mm, 13.2 +/- 3.8 mm, and 10.2 +/- 3.4 mm, respectively); the pulmonary veins were not displaced. LA volume changes significantly during the cardiac cycle, and substantial regional variation in LA motion exists. Standard measurements of LA volume significantly underestimate LA(max) compared to the gold standard measure of three-dimensional volumetrics.

On the Importance of Cycle Minimum in Sunspot Cycle Prediction

NASA Technical Reports Server (NTRS)

Wilson, Robert M.; Hathaway, David H.; Reichmann, Edwin J.

1996-01-01

The characteristics of the minima between sunspot cycles are found to provide important information for predicting the amplitude and timing of the following cycle. For example, the time of the occurrence of sunspot minimum sets the length of the previous cycle, which is correlated by the amplitude-period effect to the amplitude of the next cycle, with cycles of shorter (longer) than average length usually being followed by cycles of larger (smaller) than average size (true for 16 of 21 sunspot cycles). Likewise, the size of the minimum at cycle onset is correlated with the size of the cycle's maximum amplitude, with cycles of larger (smaller) than average size minima usually being associated with larger (smaller) than average size maxima (true for 16 of 22 sunspot cycles). Also, it was found that the size of the previous cycle's minimum and maximum relates to the size of the following cycle's minimum and maximum with an even-odd cycle number dependency. The latter effect suggests that cycle 23 will have a minimum and maximum amplitude probably larger than average in size (in particular, minimum smoothed sunspot number Rm = 12.3 +/- 7.5 and maximum smoothed sunspot number RM = 198.8 +/- 36.5, at the 95-percent level of confidence), further suggesting (by the Waldmeier effect) that it will have a faster than average rise to maximum (fast-rising cycles have ascent durations of about 41 +/- 7 months). Thus, if, as expected, onset for cycle 23 will be December 1996 +/- 3 months, based on smoothed sunspot number, then the length of cycle 22 will be about 123 +/- 3 months, inferring that it is a short-period cycle and that cycle 23 maximum amplitude probably will be larger than average in size (from the amplitude-period effect), having an RM of about 133 +/- 39 (based on the usual +/- 30 percent spread that has been seen between observed and predicted values), with maximum amplitude occurrence likely sometime between July 1999 and October 2000.

Respiratory sinus arrhythmia is a limited measure of cardiac parasympathetic control in man.

PubMed Central

Kollai, M; Mizsei, G

1990-01-01

1. Respiratory modulation of cardiac parasympathetic activity and the relationship between respiratory sinus arrhythmia and parasympathetic control has been studied in twenty-nine conscious, healthy young adult subjects. 2. Changes in heart period in propranolol-treated subjects were taken as the measure of changes in cardiac parasympathetic activity; respiratory sinus arrhythmia was quantified as the difference between maximum and minimum heart periods in a given respiratory cycle; cardiac parasympathetic control was defined as the change in heart period after administration of a full dose of atropine. 3. During normal quiet breathing the inspiratory level of cardiac parasympathetic activity was not reduced to zero. The expiratory level was influenced by excitatory inputs whose activation was related to respiratory cycle length. 4. Slow breathing was associated with augmented sinus arrhythmia, but in different individuals the influence on minimum and maximum heart periods varied so that mean heart period was increased in some subjects but decreased in others. This occurred both in control conditions and after administration of a full dose of propranolol. 5. During normal breathing the correlation across subjects between respiratory sinus arrhythmia and parasympathetic control, although significant, was not close (r = 0.61). The relationship was not affected by beta-adrenergic blockade (r = 0.63). The strength of the correlation improved when multiple regression of respiratory sinus arrhythmia was performed on three variables: parasympathetic control, respiratory cycle length and tidal volume (R = 0.93). 6. It is concluded that in conscious human subjects the respiratory modulation of cardiac parasympathetic activity is different from that observed in the anaesthetized dog, and that variations in the amplitude of respiratory sinus arrhythmia do not necessarily reflect proportional changes in cardiac parasympathetic control. PMID:2391653

Reproductive biology of the spotback skate Atlantoraja castelnaui in the south-west Atlantic Ocean.

PubMed

Colonello, J C; García, M L; Lasta, C A; Menni, R C

2012-06-01

This study provides information on the reproduction of spotback skate Atlantoraja castelnaui. A total of 232 individuals (119 females and 113 males) were obtained from surveys carried out between 2003 and 2006, from the south-west Atlantic Ocean, between 34 and 42° S and <50 m deep; another 514 specimens (241 females and 273 males) were obtained between 2005 and 2007 from commercial fishery operations carried out in the same area and landings in the port of Mar del Plata, Argentina. Males ranged from 185 to 1250 mm total length (L(T) ) and females from 243 to 1368 mm L(T) . Length at maturity was estimated to be 980 mm for males and 1089 mm L(T) for females. Lack of variation of testis mass together with the continuous production of mature spermatocyst and spermatozoa in deferent ducts suggested that males can reproduce throughout the year. Females reproduced year-round with peaks of reproductive activity an integral part of a continuous cycle. This conclusion is corroborated by the seasonal variation of ovaries, oviducal gland and the occurrence of females with eggs in the uterus throughout the year. Results from this study indicate that A. castelnaui is very susceptible to fishery pressure. © 2012 The Authors. Journal of Fish Biology © 2012 The Fisheries Society of the British Isles.

The influence of oestrous substances on cyclicity and oestrous behaviour in dairy heifers

PubMed Central

2012-01-01

Background Declining fertility is a major concern for dairy farmers today. One explanation is shorter and weaker expression of oestrus in dairy cows making it difficult to determine optimal time for artificial insemination (AI). Chemical communication is of interest in the search for tools to detect oestrus or to synchronise or enhance oestrous periods. Pheromones, used in chemical communication within species, can influence reproduction in different ways. The aim here was to investigate whether oestrous cycle length, and duration and intensity of oestrous expression in dairy heifers could be manipulated through exposure to pheromones in oestrual substances from other females. Methods Beginning on day 16 of two consecutive control oestrous cycles, ten heifers of the Swedish Red Breed (SRB) were exposed to water. During the two following cycles the heifers were exposed to urine and vaginal mucus, obtained from cows in oestrus. Cyclicity parameters were monitored through hormone measurements, oestrus detection and ultrasonographic examination. Results We found no difference in cycle length or in duration of standing oestrus between control and treatment. We did, however, find a tendency of interaction between type of exposure (control or treatment) and cycle number within type of exposure for cycle length (p = 0.068), with the length differing less between the treatment cycles. We also found a tendency of effect of type of exposure on maximal concentration (p = 0.073) and sum of concentrations (p = 0.063) of LH during the LH surge, with values being higher for the control cycles. There were also significant differences in when the different signs of oestrus occurred and in the intensity of oestrous expression. The score for oedema and hyperaemia of external genitalia was significantly higher (p = 0.004) for the control cycles and there was also a significant interaction between type of exposure and time period for restlessness (p = 0.011), with maximum score occurring earlier for treatment cycles. Conclusions No evidence of altered oestrous cycle length or duration of oestrus after exposure of females to oestrous substances from other females was found. Expression of oestrus, and maybe also LH secretion, however, seemed influenced by the exposure, with the effect of treatment being suppressive rather than enhancing. PMID:22510614

The physiological and biomechanical differences between double poling and G3 skating in world class cross-country skiers.

PubMed

Sandbakk, Øyvind; Leirdal, Stig; Ettema, Gertjan

2015-03-01

The current study compared differences in cycle characteristics, energy expenditure and peak speed between double poling (DP) and G3 skating. Eight world class male sprint skiers performed a 5-min submaximal test at 16 km h(-1) and an incremental test to exhaustion at a 5% incline during treadmill roller skiing with two different techniques: DP where all propulsion comes from poling, and G3 skating where leg skating is added to each double poling movement. Video analyses determined cycle characteristics; respiratory parameters and blood lactate concentration determined the physiological responses. G3 skating resulted in 16% longer cycle lengths at 16% lower cycle rates, whereas oxygen uptake was independent of technique during submaximal roller skiing. The corresponding advantages for G3 skating during maximal roller skiing were reflected in 14% higher speed, 30% longer cycle length at 16% lower cycle rate and 11% higher peak oxygen uptake (all p < 0.05). Compared to DP approximately 14% higher speed was achieved when leg push-offs were added in G3 skating. This was done by major increases in cycle lengths at slightly lower cycle rates and a higher aerobic energy delivery. However, the oxygen uptake for a given submaximal speed was not affected by technique although higher cycle rate was used in DP.

Thermal fatigue performance of integrally cast automotive turbine wheels

NASA Technical Reports Server (NTRS)

Humphreys, V. E.; Hofer, K. E.

1980-01-01

Fluidized bed thermal fatigue testing was conducted on 16 integrally cast automotive turbine wheels for 1000-10,000 (600 sec total) thermal cycles at 935/50 C. The 16 wheels consisted of 14 IN-792 + 1% Hf and 2 gatorized AF2-1DA wheels; 6 of the IN-792 + Hf wheels contained crack arrest pockets inside the blade root flange. Temperature transients during the thermal cycling were measured in three calibration tests using either 18 or 30 thermocouples per wheel. Thermal cracking based on crack length versus accumulated cycles was greatest for unpocketed wheels developing cracks in 8-13 cycles compared to 75-250 cycles for unpocketed wheels. However, pocketed wheels survived up to 10,000 cycles with crack lengths less than 20 mm, whereas two unpocketed wheels developed 45 mm long cracks in 1000-2000 cycles.

Effects of Pedal Speed and Crank Length on Pedaling Mechanics during Submaximal Cycling.

PubMed

Barratt, Paul Richard; Martin, James C; Elmer, Steve J; Korff, Thomas

2016-04-01

During submaximal cycling, the neuromuscular system has the freedom to select different intermuscular coordination strategies. From both a basic science and an applied perspective, it is important to understand how the central nervous system adjusts pedaling mechanics in response to changes in pedaling conditions. To determine the effect of changes in pedal speed (a marker of muscle shortening velocity) and crank length (a marker of muscle length) on pedaling mechanics during submaximal cycling. Fifteen trained cyclists performed submaximal isokinetic cycling trials (90 rpm, 240 W) using pedal speeds of 1.41 to 1.61 m·s(-1) and crank lengths of 150 to 190 mm. Joint powers were calculated using inverse dynamics. Increases in pedal speed and crank length caused large increases knee and hip angular excursions and velocities (P < 0.05), whereas ankle angular kinematics stayed relatively constant (P > 0.05). Joint moments and joint powers were less affected by changes in the independent variables, but some interesting effects and trends were observed. Most noteworthy, knee extension moments and powers tended to decrease, whereas hip extension power tended to increase with an increase in crank length. The distribution of joint moments and powers is largely maintained across a range of pedaling conditions. The crank length induced differences in knee extension moments, and powers may represent a trade-off between the central nervous system's attempts to simultaneously minimize muscle metabolic and mechanical stresses. These results increase our understanding of the neural and mechanical mechanisms underlying multi-joint task performance, and they have practical relevance to coaches, athletes, and clinicians.

Variation in Fiber Length of Eastern Cottonwood in the Lower Mississippi Valley

Treesearch

James R. Wilcox; Robert E. Farmer

1968-01-01

In the research reported here, variation in fiber length within and between trees of Populus deltoides Bartr. was studied to obtain data essential to a breeding program. Samples were obtained by taking increment cores from trees growing in natural stands in Louisiana, Mississippi, and Tennessee. Most of the variation proved to be associated with...

Meiotic gene-conversion rate and tract length variation in the human genome.

PubMed

Padhukasahasram, Badri; Rannala, Bruce

2013-02-27

Meiotic recombination occurs in the form of two different mechanisms called crossing-over and gene-conversion and both processes have an important role in shaping genetic variation in populations. Although variation in crossing-over rates has been studied extensively using sperm-typing experiments, pedigree studies and population genetic approaches, our knowledge of variation in gene-conversion parameters (ie, rates and mean tract lengths) remains far from complete. To explore variability in population gene-conversion rates and its relationship to crossing-over rate variation patterns, we have developed and validated using coalescent simulations a comprehensive Bayesian full-likelihood method that can jointly infer crossing-over and gene-conversion rates as well as tract lengths from population genomic data under general variable rate models with recombination hotspots. Here, we apply this new method to SNP data from multiple human populations and attempt to characterize for the first time the fine-scale variation in gene-conversion parameters along the human genome. We find that the estimated ratio of gene-conversion to crossing-over rates varies considerably across genomic regions as well as between populations. However, there is a great degree of uncertainty associated with such estimates. We also find substantial evidence for variation in the mean conversion tract length. The estimated tract lengths did not show any negative relationship with the local heterozygosity levels in our analysis.European Journal of Human Genetics advance online publication, 27 February 2013; doi:10.1038/ejhg.2013.30.

Variations in the rotation of the earth

NASA Astrophysics Data System (ADS)

Carter, W. E.; Robertson, D. S.; Pettey, J. E.; Tapley, B. D.; Schutz, B. E.; Eanes, R. J.; Miao, L.

Variations in the earth's rotation (UTI) and length of day have been tracked at the submillisecond level by astronomical radio interferometry and laser ranging to the LAGEOS satellite. Three years of regular measurements reveal complex patterns of variations including UTI fluctuations as large as 5 milliseconds in a few weeks. Comparison of the observed changes in length of day with variations in the global atmospheric angular momentum indicates that the dominant cause of changes in the earth's spin rate, on time scales from a week to several years, is the exchange of angular momentum between the atmosphere and the mantle. The unusually intense El Nino of 1982-1983 was marked by a strong peak in the length of day.

Different Vocal Parameters Predict Perceptions of Dominance and Attractiveness.

PubMed

Hodges-Simeon, Carolyn R; Gaulin, Steven J C; Puts, David A

2010-12-01

Low mean fundamental frequency (F(0)) in men's voices has been found to positively influence perceptions of dominance by men and attractiveness by women using standardized speech. Using natural speech obtained during an ecologically valid social interaction, we examined relationships between multiple vocal parameters and dominance and attractiveness judgments. Male voices from an unscripted dating game were judged by men for physical and social dominance and by women in fertile and non-fertile menstrual cycle phases for desirability in short-term and long-term relationships. Five vocal parameters were analyzed: mean F(0) (an acoustic correlate of vocal fold size), F(0) variation, intensity (loudness), utterance duration, and formant dispersion (D(f), an acoustic correlate of vocal tract length). Parallel but separate ratings of speech transcripts served as controls for content. Multiple regression analyses were used to examine the independent contributions of each of the predictors. Physical dominance was predicted by low F(0) variation and physically dominant word content. Social dominance was predicted only by socially dominant word content. Ratings of attractiveness by women were predicted by low mean F(0), low D(f), high intensity, and attractive word content across cycle phase and mating context. Low D(f) was perceived as attractive by fertile-phase women only. We hypothesize that competitors and potential mates may attend more strongly to different components of men's voices because of the different types of information these vocal parameters provide.

Neck and shoulder muscle activity and thorax movement in singing and speaking tasks with variation in vocal loudness and pitch.

PubMed

Pettersen, Viggo; Bjørkøy, Kåre; Torp, Hans; Westgaard, Rolf Harald

2005-12-01

The aim of this study was to examine respiratory phasing and loading levels of sternocleidomastoideus (STM), scalenus (SC), and upper trapezius (TR) muscles in vocalization tasks with variation in vocal loudness and pitch. Eight advanced singing students, aged 22 to 28 years, participated. Surface electromyographic (EMG) activity was recorded from STM, SC, and TR. Thorax movement was detected by two strain gauge sensors placed around the upper (upper TX) and lower (lower TX) thorax. A glissando and simplified singing and speaking tasks were performed. Sustained vowels /a:-i-ae-o:/ were sung in a glissando from lowest to highest pitch (mixed voice/falsetto) back to lowest pitch and in short singing sequences at comfortable, low, and high pitches. The same vowels were spoken softly and loudly for about the same length. The subjects inhaled between the vowels. It was concluded that the inspiratory phased STM and SC muscles produced a counterforce to compression of upper TX at high pitches in glissando. STM and SC were activated to higher levels during phonation than in inhalation. As breathing demands were reduced, STM and SC activity was lowered and the respiratory phasing of peak amplitude changed to inhalation. TR contributed to exhalation in demanding singing with long breathing cycles, but it was less active in singing tasks with short breathing cycles and was essentially inactive in simplified speaking tasks.

Forests of Vermont, 2014

Treesearch

Randall S. Morin; R. Riemann

2015-01-01

This publication provides an overview of forest resources in Vermont based on inventories conducted by the U.S. Forest Service Forest Inventory and Analysis (FIA) program of the Northern Research Station. For annual inventory years 2003-2013, the cycle length was equal to 5 years. Beginning in 2014, the cycle length was changed to 7 years. For the 2014 inventory,...

Helioseismology Observations of Solar Cycles and Dynamo Modeling

NASA Astrophysics Data System (ADS)

Kosovichev, A. G.; Guerrero, G.; Pipin, V.

2017-12-01

Helioseismology observations from the SOHO and SDO, obtained in 1996-2017, provide unique insight into the dynamics of the Sun's deep interior for two solar cycles. The data allow us to investigate variations of the solar interior structure and dynamics, and compare these variations with dynamo models and simulations. We use results of the local and global helioseismology data processing pipelines at the SDO Joint Science Operations Center (Stanford University) to study solar-cycle variations of the differential rotation, meridional circulation, large-scale flows and global asphericity. By comparing the helioseismology results with the evolution of surface magnetic fields we identify characteristic changes associated the initiation and development of Solar Cycles 23 and 24. For the physical interpretation of observed variations, the results are compared with the current mean-field dynamo models and 3D MHD dynamo simulations. It is shown that the helioseismology inferences provide important constraints on the solar dynamo mechanism, may explain the fundamental difference between the two solar cycles, and also give information about the next solar cycle.

Realizing the Translational Potential of Telomere Length Variation as a Tissue-Based Prognostic Marker for Prostate Cancer

DTIC Science & Technology

2015-10-01

Award Number: W81XWH-12-1-0545 TITLE: Realizing the Translational Potential of Telomere Length Variation as a Tissue- Based Prognostic Marker for...COVERED 30Sep2014 - 29Sep2015 4. TITLE AND SUBTITLE 5a. CONTRACT NUMBER W81XWH-12-1-0545 Realizing the Translational Potential of Telomere Length...14. ABSTRACT We are testing, in prospective studies from Hopkins (Brady) and Harvard (PHS, HPFS), whether the combination of telomere length

Influence of different shortening velocities preceding stretch on human triceps surae moment generation in vivo.

PubMed

De Monte, Gianpiero; Arampatzis, Adamantios

2008-07-19

The purpose of this study was to examine the influence of different shortening velocities preceding the stretch on moment generation of the triceps surae muscles and architecture of the m. gastrocnemius medialis after shortening-stretch cycles of equal magnitude in vivo. Eleven male subjects (31.6+/-5.8 years, 178.4+/-7.3cm, 80.6+/-9.6kg) performed a series of electro-stimulated (85Hz) shortening-stretch plantar flexion contractions. The shortening-stretch cycles were performed at three constant angular velocities (25, 50, 100 degrees /s) in the plantar flexion direction (shortening) and at 50 degrees /s in the dorsiflexion direction (stretching). The resultant ankle joint moments were calculated through inverse dynamics. Pennation angle and fascicle length of the m. gastrocnemius medialis at rest and during contractions were measured using ultrasonography. The corresponding ankle moments, kinematics and changes in muscle architecture were analysed at seven time intervals. An analysis of variance for repeated measurements and post hoc test with Bonferroni correction was used to check the velocity-related effects on moment enhancement (alpha=0.05). The results show an increase in pennation angles and a decrease in fascicle lengths after the shortening-stretch cycle. The ankle joint moment ratio (post to pre) was higher (p<0.01) than 1.0 indicating a moment enhancement after the shortening-stretch cycle. The found ankle joint moment enhancement was 2-5% after the shortening-stretch cycle and was independed of the shortening velocity. Furthermore, the decrease in fascicle length after the shortening-stretch cycle indicates that the moment enhancement found in the present study is underestimated at least by 1-3%. Considering that the experiments have been done at the ascending limb of the force-length curve and that force enhancement is higher at the descending and the plateau region of the force-length curve, we conclude that the moment enhancement after shortening-stretch cycle can have important physiological affects while locomotion.

The caligid life cycle: new evidence from Lepeophtheirus elegans reconciles the cycles of Caligus and Lepeophtheirus (Copepoda: Caligidae)

PubMed Central

Venmathi Maran, Balu Alagar; Moon, Seong Yong; Ohtsuka, Susumu; Oh, Sung-Yong; Soh, Ho Young; Myoung, Jung-Goo; Iglikowska, Anna; Boxshall, Geoffrey Allan

2013-01-01

The developmental stages of the sea louse Lepeophtheirus elegans (Copepoda: Caligidae) are described from material collected from marine ranched Korean rockfish, Sebastes schlegelii. In L. elegans, setal number on the proximal segment of the antennule increases from 3 in the copepodid to 27 in the adult. Using the number of setae as a stage marker supports the inference that the post-naupliar phase of the life cycle comprises six stages: copepodid, chalimus I, chalimus II, pre-adult I, pre-adult II, and the adult. We observed variation in body length in both of the chalimus stages which we consider represents an early expression of sexual size dimorphism. We interpret the larger specimens of chalimus I as putative females, and the smaller as putative males; similarly with chalimus II, larger specimens are putative females and the smaller are males. Two patterns of life cycle are currently recognized within the Caligidae but the evidence presented here reconciles the two. We conclude that the typical caligid life cycle comprises only eight stages: two naupliar, one copepodid, and four chalimus stages preceding the adult in Caligus, but with the four chalimus stages represented by two chalimus and two pre-adult stages in Lepeophtheirus. This is a profound change with significant implications for the aquaculture industry, given that lice monitoring protocols include counts of chalimus stages and use temperature to predict when they will moult into the more pathogenic, mobile pre-adults. Lice management strategies must be tailored to the precise life cycle of the parasite. PMID:23647664

Temporal-spatial variation of DOC concentration, UV absorbance and the flux estimation in the Lower Dagu River, China

NASA Astrophysics Data System (ADS)

Xi, Min; Kong, Fanlong; Li, Yue; Kong, Fanting

2017-12-01

Dissolved organic carbon (DOC) is an important component for both carbon cycle and energy balance. The concentration, UV absorbance, and export flux of DOC in the natural environment dominate many important transport processes. To better understand the temporal and spatial variation of DOC, 7 sites along the Lower Dagu River were chosen to conduct a comprehensive measurement from March 2013 to February 2014. Specifically, water samples were collected from the Lower Dagu River between the 26th and 29th of every month during the experimental period. The DOC concentration (CDOC) and UV absorbance were analyzed using a total organic carbon analyzer and the ultraviolet-visible absorption spectrum, and the DOC export flux was estimated with a simple empirical model. The results showed that the CDOC of the Lower Dagu River varied from 1.32 to 12.56 mg/L, consistent with global rivers. The CDOC and UV absorbance showed significant spatial variation in the Dagu River during the experiential period because of the upstream natural processes and human activities in the watershed. The spatial variation is mainly due to dam or reservoir constructions, riverside ecological environment changes, and non-point source or wastewater discharge. The seasonal variation of CDOC was mainly related to the source of water DOC, river runoff, and temperature, and the UV absorbance and humification degree of DOC had no obvious differences among months ( P<0.05). UV absorbance was applied to test the CDOC in Lower Dagu River using wave lengths of 254 and 280 nm. The results revealed that the annual DOC export flux varied from 1.6 to 3.76 × 105 g C/km2/yr in a complete hydrological year, significantly lower than the global average. It is worth mentioning that the DOC export flux was mainly concentrated in summer (˜90% of all-year flux in July and August), since the runoff in the Dagu River took place frequently in summer. These observations implied environment change could bring the temporal-spatial variation of DOC and the exports, which would further affect the land-ocean interactions in the Lower Dagu River and the global carbon cycle.

Progesterone concentrations during estrous cycle of dairy cows exposed to electric and magnetic fields.

PubMed

Burchard, J F; Nguyen, D H; Block, E

1998-01-01

Sixteen multiparous nonpregnant lactating Holstein cows (each weighing 662 +/- 65 kg in 150.4 +/- 40 day of lactation) were confined to wooden metabolic cages with 12:12 h light:dark cycle during the experiment. The cows were divided into two sequences of eight cows each and exposed to electric and magnetic fields (EMF) in an exposure chamber. This chamber produced a vertical electric field of 10 kV/m and a uniform horizontal magnetic field of 30 microT at 60 Hz. One sequence was exposed for three estrous cycles of 24 to 27 days. During the first estrous cycle, the electric and magnetic fields were off; during the second estrous cycle, they were on; and during the third estrous cycle, they were off. The second sequence was also exposed for three 24 to 26 days estrous cycles, but the exposure to the fields was reversed (first estrous cycle, on; second estrous cycle, off; third estrous cycle, on). The length of each exposure period (21 to 27 days) varied according to the estrous cycle length. No differences were detected in plasma progesterone concentrations and area under the progesterone curve during estrous cycles between EMF nonexposed and exposed periods (2.28 +/- 0.17 and 2.25 +/- 0.17; and 24.5 +/- 1.9 vs. 26.4 +/- 1.9 ng/ml, respectively). However, estrous cycle length, determined by the presence of a functional corpus luteum detected by concentrations of progesterone equal to or more than 1 ng/ml plasma, was shorter in nonexposed cows than when they were exposed to EMF (22.0 +/- 0.9 vs. 25.3 +/- 1.4 days).

Activity Analyses for Solar-type Stars Observed with Kepler. II. Magnetic Feature versus Flare Activity

NASA Astrophysics Data System (ADS)

He, Han; Wang, Huaning; Zhang, Mei; Mehrabi, Ahmad; Yan, Yan; Yun, Duo

2018-05-01

The light curves of solar-type stars present both periodic fluctuation and flare spikes. The gradual periodic fluctuation is interpreted as the rotational modulation of magnetic features on the stellar surface and is used to deduce magnetic feature activity properties. The flare spikes in light curves are used to derive flare activity properties. In this paper, we analyze the light curve data of three solar-type stars (KIC 6034120, KIC 3118883, and KIC 10528093) observed with Kepler space telescope and investigate the relationship between their magnetic feature activities and flare activities. The analysis shows that: (1) both the magnetic feature activity and the flare activity exhibit long-term variations as the Sun does; (2) unlike the Sun, the long-term variations of magnetic feature activity and flare activity are not in phase with each other; (3) the analysis of star KIC 6034120 suggests that the long-term variations of magnetic feature activity and flare activity have a similar cycle length. Our analysis and results indicate that the magnetic features that dominate rotational modulation and the flares possibly have different source regions, although they may be influenced by the magnetic field generated through a same dynamo process.

Effects of meridional flow variations on solar cycles 23 and 24

DOE Office of Scientific and Technical Information (OSTI.GOV)

Upton, Lisa; Hathaway, David H., E-mail: lisa.a.upton@vanderbilt.edu, E-mail: lar0009@uah.edu, E-mail: david.hathaway@nasa.gov

2014-09-10

The faster meridional flow that preceded the solar cycle 23/24 minimum is thought to have led to weaker polar field strengths, producing the extended solar minimum and the unusually weak cycle 24. To determine the impact of meridional flow variations on the sunspot cycle, we have simulated the Sun's surface magnetic field evolution with our newly developed surface flux transport model. We investigate three different cases: a constant average meridional flow, the observed time-varying meridional flow, and a time-varying meridional flow in which the observed variations from the average have been doubled. Comparison of these simulations shows that the variationsmore » in the meridional flow over cycle 23 have a significant impact (∼20%) on the polar fields. However, the variations produced polar fields that were stronger than they would have been otherwise. We propose that the primary cause of the extended cycle 23/24 minimum and weak cycle 24 was the weakness of cycle 23 itself—with fewer sunspots, there was insufficient flux to build a big cycle. We also find that any polar counter-cells in the meridional flow (equatorward flow at high latitudes) produce flux concentrations at mid-to-high latitudes that are not consistent with observations.« less

Sunspot random walk and 22-year variation

USGS Publications Warehouse

Love, Jeffrey J.; Rigler, E. Joshua

2012-01-01

We examine two stochastic models for consistency with observed long-term secular trends in sunspot number and a faint, but semi-persistent, 22-yr signal: (1) a null hypothesis, a simple one-parameter random-walk model of sunspot-number cycle-to-cycle change, and, (2) an alternative hypothesis, a two-parameter random-walk model with an imposed 22-yr alternating amplitude. The observed secular trend in sunspots, seen from solar cycle 5 to 23, would not be an unlikely result of the accumulation of multiple random-walk steps. Statistical tests show that a 22-yr signal can be resolved in historical sunspot data; that is, the probability is low that it would be realized from random data. On the other hand, the 22-yr signal has a small amplitude compared to random variation, and so it has a relatively small effect on sunspot predictions. Many published predictions for cycle 24 sunspots fall within the dispersion of previous cycle-to-cycle sunspot differences. The probability is low that the Sun will, with the accumulation of random steps over the next few cycles, walk down to a Dalton-like minimum. Our models support published interpretations of sunspot secular variation and 22-yr variation resulting from cycle-to-cycle accumulation of dynamo-generated magnetic energy.

Body proportions in ancient Andeans from high and low altitudes.

PubMed

Weinstein, Karen J

2005-11-01

Living human populations from high altitudes in the Andes exhibit relatively short limbs compared with neighboring groups from lower elevations as adaptations to cold climates characteristic of high-altitude environments. This study compares relative limb lengths and proportions in pre-Contact human skeletons from different altitudes to test whether ecogeographic variation also existed in Andean prehistory. Maximum lengths of the humerus, radius, femur, and tibia, and femoral head breadth are measured in sex-specific groups of adult human skeletons (N = 346) from the central (n = 80) and the south-central (n = 123) Andean coasts, the Atacama Desert at 2,500 m (n = 102), and the southern Peruvian highlands at 2,000-3,800 m (n = 41). To test whether limb lengths vary with altitude, comparisons are made of intralimb proportions, limb lengths against body mass estimates derived from published equations, limb lengths against the geometric mean of all measurements, and principal component analysis. Intralimb proportions do not statistically differ between coastal groups and those from the Atacama Desert, whereas intralimb proportions are significantly shorter in the Peruvian highland sample. Overall body size and limb lengths relative to body size vary along an altitudinal gradient, with larger individuals from coastal environments and smaller individuals with relatively longer limbs for their size from higher elevations. Ecogeographic variation in relation to climate explains the variation in intralimb proportions, and dietary variation may explain the altitudinal cline in body size and limb lengths relative to body size. The potential effects of gene flow on variation in body proportions in Andean prehistory are also explored. Copyright 2005 Wiley-Liss, Inc

Search for Teff variations along the Solar Cycle

NASA Astrophysics Data System (ADS)

Caccin, B.; Penza, V.

The measurements of the total solar irradiance (TSI) show the existence of variations on characteristic times going from few minutes to whole solar cycle, as a result of different physical mechanisms acting on different temporal scales. Along the cycle delta (TSI) is the order of 0.15%, in phase with the magnetic activity (cf. Fröhlich, \\cite{frohlich}), attributed mainly to the overcompensation of the facular brightness vs the spot darkness and to a network variation. The problem of determining also a possible contribution due to a global variation of the photospheric background remains open. \\ Here we study the variations of the line-depth ratios measured by Gray and Livingston (\\cite{grayliv97a}, \\cite{grayliv97b}) to determine delta Teff along the cycle and show that they cannot be attributed to a modulation of the photospheric background alone, but that active region effects are, probably, dominant.

Actigraphy-defined Measures of Sleep and Movement Across the Menstrual Cycle In Midlife Menstruating Women: SWAN Sleep Study

PubMed Central

Zheng, Huiyong; Harlow, Siobán D; Kravitz, Howard M; Bromberger, Joyce; Buysse, Daniel J; Matthews, Karen A; Gold, Ellen B; Owens, Jane F; Hall, Martica

2014-01-01

Objective To evaluate patterns in actigraphy-defined sleep measures across the menstrual cycle, testing the hypothesis that sleep would be more disrupted in the premenstrual period, i.e. in the 14 days prior to menses. Methods A community-based, longitudinal study of wrist actigraphy-derived sleep measures was conducted with 163 women (58 African-American, 78 White, and 27 Chinese) of late reproductive age (mean=51.5, SD=2.0 years) from the Study of Women's Health Across the Nation (SWAN) Sleep Study. Daily measures of sleep [sleep efficiency (%) and total sleep time (minutes)] and movement during sleep [mean activity score (counts)] were characterized using wrist actigraphy across a menstrual cycle or 35 days, whichever was shorter. Data were standardized to 28 days to account for the variation of unequal cycle lengths and divided into four weekly segments for analyses. Results Sleep efficiency percentage declined gradually across the menstrual cycle, but the decline became pronounced in fourth week, the premenstrual period. Compared with third week, sleep efficiency declined by 5% (p<0.0001) and mean total sleep time was 25 minutes less (p=0.0002) in fourth week. No significant mean differences were found when comparing the means of second week versus third week. The association of weekly segments with sleep efficiency or minutes of total sleep time was modified by sociodemographic and lifestyle factors, including body mass index (BMI), race, study site, financial strain, marital status, and smoking. Conclusions Sleep varied systematically across the menstrual cycle in women of late reproductive age, including a gradual decline in sleep efficiency across all weeks, with a more marked change premenstrually during the last week of the menstrual cycle. These sleep changes may be modifiable by altering lifestyle factors. PMID:24845393

S‐phase duration is the main target of cell cycle regulation in neural progenitors of developing ferret neocortex

PubMed Central

Turrero García, Miguel; Chang, YoonJeung; Arai, Yoko

2016-01-01

ABSTRACT The evolutionary expansion of the neocortex primarily reflects increases in abundance and proliferative capacity of cortical progenitors and in the length of the neurogenic period during development. Cell cycle parameters of neocortical progenitors are an important determinant of cortical development. The ferret (Mustela putorius furo), a gyrencephalic mammal, has gained increasing importance as a model for studying corticogenesis. Here, we have studied the abundance, proliferation, and cell cycle parameters of different neural progenitor types, defined by their differential expression of the transcription factors Pax6 and Tbr2, in the various germinal zones of developing ferret neocortex. We focused our analyses on postnatal day 1, a late stage of cortical neurogenesis when upper‐layer neurons are produced. Based on cumulative 5‐ethynyl‐2′‐deoxyuridine (EdU) labeling as well as Ki67 and proliferating cell nuclear antigen (PCNA) immunofluorescence, we determined the duration of the various cell cycle phases of the different neocortical progenitor subpopulations. Ferret neocortical progenitors were found to exhibit longer cell cycles than those of rodents and little variation in the duration of G1 among distinct progenitor types, also in contrast to rodents. Remarkably, the main difference in cell cycle parameters among the various progenitor types was the duration of S‐phase, which became shorter as progenitors progressively changed transcription factor expression from patterns characteristic of self‐renewal to those of neuron production. Hence, S‐phase duration emerges as major target of cell cycle regulation in cortical progenitors of this gyrencephalic mammal. J. Comp. Neurol. 524:456–470, 2016. © 2015 The Authors The Journal of Comparative Neurology Published by Wiley Periodicals, Inc. PMID:25963823

Phase relations of natural 65 year SST variations, ocean sea level variations over 260 years, and Arctic sea-ice retreat of the satellite era - issues of cause and effect.

NASA Astrophysics Data System (ADS)

Asten, Michael

2017-04-01

We study sea level variations over the past 300yr in order to quantify what fraction of variations may be considered cyclic, and what phase relations exist with respect to those cycles. The 64yr cycle detected by Chambers et al (2012) is found in the 1960-2000 data set which Hamlington et al (2013) interpreted as an expression of the PDO; we show that fitting a 64yr cycle is a better fit, accounting for 92% of variance. In a 300yr GMSL tide guage record Jeverejeva et al (2008) identified a 60-65yr cycle superimposed on an upward trend from 1800CE. Using break-points and removal of centennial trends identified by Kemp et al (2015), we produce a detrended GMSL record for 1700-2000CE which emphasizes the 60-65yr oscillations. A least-square fit using a 64yr period cosine yields an amplitude 12mm and origin at year 1958.6, which accounts for 30% of the variance. A plot of the cosine against the entire length of the 300yr detrended GMSL record shows a clear phase lock for the interval 1740 to 2000CE, denoting either a very consistent timing of an internally generated natural variation, or adding to evidence for an external forcing of astronomical origin (Scafetta 2012, 2013). Barcikowska et al (2016) have identified a 65yr cyclic variation in sea surface temperature in the first multidecadal component of Multi- Channel Singular Spectrum Analysis (MSSA) on the Hadley SST data set (RC60). A plot of RC60 versus our fitted cosine shows the phase shift to be 16 yr, close to a 90 degree phase lag of GMSL relative to RC60. This is the relation to be expected for a simple low-pass or integrating filter, which suggests that cyclic natural variations in sea-surface temperature drive similar variations in GMSL. We compare the extent of Arctic sea-ice using the time interval of 1979- 2016 (window of satellite imagery). The decrease in summer ice cover has been subject of many predictions as to when summer ice will reach zero. The plot of measured ice area can be fitted with many speculative curves, and we show three such best fit curves, a parabola (zero ice cover by 2028), a linear fit (zero by 2060) and a 64yr period cosine, where the cosine is a shape chosen as a hypothesis, given the relation we observe between SST natural variations and 260 years of detrended sea level data. The cosine best fit shows a maximum ice coverage in 1985.6 and predicted minimum in 2017.6, which compares with the detrended sea level cyclic component minimum at 1990.6 and predicted maximum at 2023.6CE. Thus the sea-ice retreat lags RC60 by about 10 yr or 60deg in phase. The consistent phase of sea-level change over 260yr, and the phase lags of sea-ice retreat and sea-level change relative to the natural 65yr cyclic component of SST, have implications in the debate over internal versus external drivers of the cyclic components of change, and in hypotheses on cause and effect of the non-anthropogenic components of change.

Phenotypic integration in an extended phenotype: among-individual variation in nest-building traits of the alfalfa leafcutting bee (Megachile rotundata).

PubMed

Royauté, Raphaël; Wilson, Elisabeth S; Helm, Bryan R; Mallinger, Rachel E; Prasifka, Jarrad; Greenlee, Kendra J; Bowsher, Julia H

2018-03-02

Structures such as nests and burrows are an essential component of many organisms' life-cycle and require a complex sequence of behaviours. Because behaviours can vary consistently among individuals and be correlated with one another, we hypothesized that these structures would (1) show evidence of among-individual variation, (2) be organized into distinct functional modules and (3) show evidence of trade-offs among functional modules due to limits on energy budgets. We tested these hypotheses using the alfalfa leafcutting bee, Megachile rotundata, a solitary bee and important crop pollinator. Megachile rotundata constructs complex nests by gathering leaf materials to form a linear series of cells in pre-existing cavities. In this study, we examined variation in the following nest construction traits: reproduction (number of cells per nest and nest length), nest protection (cap length and number of leaves per cap), cell construction (cell size and number of leaves per cell) and cell provisioning (cell mass) from 60 nests. We found a general decline in investment in cell construction and provisioning with each new cell built. In addition, we found evidence for both repeatability and plasticity in cell provisioning with little evidence for trade-offs among traits. Instead, most traits were positively, albeit weakly, correlated (r ~ 0.15), and traits were loosely organized into covarying modules. Our results show that individual differences in nest construction are detectable at a level similar to that of other behavioural traits and that these traits are only weakly integrated. This suggests that nest components are capable of independent evolutionary trajectories. © 2018 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2018 European Society For Evolutionary Biology.

Biologic Rhythms Derived from Siberian Mammoths' Hairs

PubMed Central

Spilde, Mike; Lanzirotti, Antonio; Qualls, Clifford; Phillips, Genevieve; Ali, Abdul-Mehdi; Agenbroad, Larry; Appenzeller, Otto

2011-01-01

Hair is preserved for millennia in permafrost; it enshrines a record of biologic rhythms and offers a glimpse at chronobiology as it was in extinct animals. Here we compare biologic rhythms gleaned from mammoth's hairs with those of modern human hair. Four mammoths' hairs came from varying locations in Siberia 4600 km, four time zones, apart ranging in age between 18,000 and 20,000 years before present. We used two contemporaneous human hairs for comparison. Power spectra derived from hydrogen isotope ratios along the length of the hairs gave insight into biologic rhythms, which were different in the mammoths depending on location and differed from humans. Hair growth for mammoths was ∼31 cms/year and ∼16 cms/year for humans. Recurrent annual rhythms of slow and fast growth varying from 3.4 weeks/cycles to 8.7 weeks/cycles for slow periods and 1.2 weeks/cycles to 2.2 weeks/cycles for fast periods were identified in mammoth's hairs. The mineral content of mammoth's hairs was measured by electron microprobe analysis (k-ratios), which showed no differences in sulfur amongst the mammoth hairs but significantly more iron then in human hair. The fractal nature of the data derived from the hairs became evident in Mandelbrot sets derived from hydrogen isotope ratios, mineral content and geographic location. Confocal microscopy and scanning electron microscopy showed varied degrees of preservation of the cuticle largely independent of age but not location of the specimens. X-ray fluorescence microprobe and fluorescence computed micro-tomography analyses allowed evaluation of metal distribution and visualization of hollow tubes in the mammoth's hairs. Seasonal variations in iron and copper content combined with spectral analyses gave insights into variation in food intake of the animals. Biologic rhythms gleaned from power spectral plots obtained by modern methods revealed life style and behavior of extinct mega-fauna. PMID:21747920

Biologic Rhythms Derived from Siberian Mammoths Hairs

DOE Office of Scientific and Technical Information (OSTI.GOV)

M Spilde; A Lanzirotti; C Qualls

2011-12-31

Hair is preserved for millennia in permafrost; it enshrines a record of biologic rhythms and offers a glimpse at chronobiology as it was in extinct animals. Here we compare biologic rhythms gleaned from mammoth's hairs with those of modern human hair. Four mammoths' hairs came from varying locations in Siberia 4600 km, four time zones, apart ranging in age between 18,000 and 20,000 years before present. We used two contemporaneous human hairs for comparison. Power spectra derived from hydrogen isotope ratios along the length of the hairs gave insight into biologic rhythms, which were different in the mammoths depending onmore » location and differed from humans. Hair growth for mammoths was {approx}31 cms/year and {approx}16 cms/year for humans. Recurrent annual rhythms of slow and fast growth varying from 3.4 weeks/cycles to 8.7 weeks/cycles for slow periods and 1.2 weeks/cycles to 2.2 weeks/cycles for fast periods were identified in mammoth's hairs. The mineral content of mammoth's hairs was measured by electron microprobe analysis (k-ratios), which showed no differences in sulfur amongst the mammoth hairs but significantly more iron then in human hair. The fractal nature of the data derived from the hairs became evident in Mandelbrot sets derived from hydrogen isotope ratios, mineral content and geographic location. Confocal microscopy and scanning electron microscopy showed varied degrees of preservation of the cuticle largely independent of age but not location of the specimens. X-ray fluorescence microprobe and fluorescence computed micro-tomography analyses allowed evaluation of metal distribution and visualization of hollow tubes in the mammoth's hairs. Seasonal variations in iron and copper content combined with spectral analyses gave insights into variation in food intake of the animals. Biologic rhythms gleaned from power spectral plots obtained by modern methods revealed life style and behavior of extinct mega-fauna.« less

Biologic rhythms derived from Siberian mammoths' hairs.

PubMed

Spilde, Mike; Lanzirotti, Antonio; Qualls, Clifford; Phillips, Genevieve; Ali, Abdul-Mehdi; Agenbroad, Larry; Appenzeller, Otto

2011-01-01

Hair is preserved for millennia in permafrost; it enshrines a record of biologic rhythms and offers a glimpse at chronobiology as it was in extinct animals. Here we compare biologic rhythms gleaned from mammoth's hairs with those of modern human hair. Four mammoths' hairs came from varying locations in Siberia 4600 km, four time zones, apart ranging in age between 18,000 and 20,000 years before present. We used two contemporaneous human hairs for comparison. Power spectra derived from hydrogen isotope ratios along the length of the hairs gave insight into biologic rhythms, which were different in the mammoths depending on location and differed from humans. Hair growth for mammoths was ∼31 cms/year and ∼16 cms/year for humans. Recurrent annual rhythms of slow and fast growth varying from 3.4 weeks/cycles to 8.7 weeks/cycles for slow periods and 1.2 weeks/cycles to 2.2 weeks/cycles for fast periods were identified in mammoth's hairs. The mineral content of mammoth's hairs was measured by electron microprobe analysis (k-ratios), which showed no differences in sulfur amongst the mammoth hairs but significantly more iron then in human hair. The fractal nature of the data derived from the hairs became evident in Mandelbrot sets derived from hydrogen isotope ratios, mineral content and geographic location. Confocal microscopy and scanning electron microscopy showed varied degrees of preservation of the cuticle largely independent of age but not location of the specimens. X-ray fluorescence microprobe and fluorescence computed micro-tomography analyses allowed evaluation of metal distribution and visualization of hollow tubes in the mammoth's hairs. Seasonal variations in iron and copper content combined with spectral analyses gave insights into variation in food intake of the animals. Biologic rhythms gleaned from power spectral plots obtained by modern methods revealed life style and behavior of extinct mega-fauna.

Effects of Pedal Speed and Crank Length on Pedaling Mechanics during Submaximal Cycling

PubMed Central

BARRATT, PAUL RICHARD; MARTIN, JAMES C.; ELMER, STEVE J.; KORFF, THOMAS

2016-01-01

ABSTRACT During submaximal cycling, the neuromuscular system has the freedom to select different intermuscular coordination strategies. From both a basic science and an applied perspective, it is important to understand how the central nervous system adjusts pedaling mechanics in response to changes in pedaling conditions. Purpose To determine the effect of changes in pedal speed (a marker of muscle shortening velocity) and crank length (a marker of muscle length) on pedaling mechanics during submaximal cycling. Methods Fifteen trained cyclists performed submaximal isokinetic cycling trials (90 rpm, 240 W) using pedal speeds of 1.41 to 1.61 m·s−1 and crank lengths of 150 to 190 mm. Joint powers were calculated using inverse dynamics. Results Increases in pedal speed and crank length caused large increases knee and hip angular excursions and velocities (P < 0.05), whereas ankle angular kinematics stayed relatively constant (P > 0.05). Joint moments and joint powers were less affected by changes in the independent variables, but some interesting effects and trends were observed. Most noteworthy, knee extension moments and powers tended to decrease, whereas hip extension power tended to increase with an increase in crank length. Conclusions The distribution of joint moments and powers is largely maintained across a range of pedaling conditions. The crank length induced differences in knee extension moments, and powers may represent a trade-off between the central nervous system’s attempts to simultaneously minimize muscle metabolic and mechanical stresses. These results increase our understanding of the neural and mechanical mechanisms underlying multi-joint task performance, and they have practical relevance to coaches, athletes, and clinicians. PMID:26559455

Kinematic Variables Evolution During a 200-m Maximum Test in Young Paddlers

PubMed Central

Vaquero-Cristóbal, Raquel; Alacid, Fernando; López-Plaza, Daniel; Muyor, José María; López-Miñarro, Pedro A.

2013-01-01

The objective of this research was to determine the kinematic variables evolution in a sprint canoeing maximal test over 200 m, comparing women and men kayak paddlers and men canoeists. Speed evolution, cycle frequency, cycle length and cycle index were analysed each 50 m section in fifty-two young paddlers (20 male kayakers, 17 female kayakers and 15 male canoeists; 13–14 years-old). Recordings were taken from a boat which followed each paddler trial in order to measure the variables cited above. Kinematic evolution was similar in the three categories, the speed and cycle index decreased through the test after the first 50 m. Significant differences were observed among most of the sections in speed and the cycle index (p<0.05 and <0.01, respectively). Cycle length remained stable showing the lowest values in the first section when compared with the others (p<0.01). Cycle frequency progressively decreased along the distance. Significant differences were identified in the majority of the sections (p<0.01). Men kayakers attained higher values in all the variables than women kayakers and men canoeists, but only such variables as speed, cycle length and cycle index were observed to be significantly higher (p<0.01). Moreover, lower kinematic values were obtained from men canoeists. The study of the evolution of kinematic variables can provide valuable information for athletes and coaches while planning training sessions and competitions. PMID:24235980

Extended megadroughts in the southwestern United States during Pleistocene interglacials.

PubMed

Fawcett, Peter J; Werne, Josef P; Anderson, R Scott; Heikoop, Jeffrey M; Brown, Erik T; Berke, Melissa A; Smith, Susan J; Goff, Fraser; Donohoo-Hurley, Linda; Cisneros-Dozal, Luz M; Schouten, Stefan; Sinninghe Damsté, Jaap S; Huang, Yongsong; Toney, Jaime; Fessenden, Julianna; WoldeGabriel, Giday; Atudorei, Viorel; Geissman, John W; Allen, Craig D

2011-02-24

The potential for increased drought frequency and severity linked to anthropogenic climate change in the semi-arid regions of the southwestern United States (US) is a serious concern. Multi-year droughts during the instrumental period and decadal-length droughts of the past two millennia were shorter and climatically different from the future permanent, 'dust-bowl-like' megadrought conditions, lasting decades to a century, that are predicted as a consequence of warming. So far, it has been unclear whether or not such megadroughts occurred in the southwestern US, and, if so, with what regularity and intensity. Here we show that periods of aridity lasting centuries to millennia occurred in the southwestern US during mid-Pleistocene interglacials. Using molecular palaeotemperature proxies to reconstruct the mean annual temperature (MAT) in mid-Pleistocene lacustrine sediment from the Valles Caldera, New Mexico, we found that the driest conditions occurred during the warmest phases of interglacials, when the MAT was comparable to or higher than the modern MAT. A collapse of drought-tolerant C(4) plant communities during these warm, dry intervals indicates a significant reduction in summer precipitation, possibly in response to a poleward migration of the subtropical dry zone. Three MAT cycles ∼2 °C in amplitude occurred within Marine Isotope Stage (MIS) 11 and seem to correspond to the muted precessional cycles within this interglacial. In comparison with MIS 11, MIS 13 experienced higher precessional-cycle amplitudes, larger variations in MAT (4-6 °C) and a longer period of extended warmth, suggesting that local insolation variations were important to interglacial climatic variability in the southwestern US. Comparison of the early MIS 11 climate record with the Holocene record shows many similarities and implies that, in the absence of anthropogenic forcing, the region should be entering a cooler and wetter phase.

Analysis of Co-spatial UV-Optical STIS Spectra of Seven Planetary Nebulae From HST Cycle 19 GO 12600

NASA Astrophysics Data System (ADS)

Miller, Timothy R.; Henry, Richard B. C.; Dufour, Reginald J.; Kwitter, Karen B.; Shaw, Richard A.; Balick, Bruce; Corradi, Romano

2016-01-01

We present an analysis of seven spatially resolved planetary nebulae (PNe), NGC 2440, NGC 3242, NGC 5315, NGC 5882, NGC 7662, IC 2165, and IC 3568, from observations in the Cycle 19 program GO 12600 using HST STIS. These seven observations cover the wavelength range 1150-10,270 Å with 0.2 and 0.5 arcsec wide slits, and are co-spatial to within 0.1 arcsec along a 25 arcsec length across each nebula. The wavelength and spatial coverage enabled a detailed study of physical conditions and abundances from UV and optical line emissions (compared to only optical lines) for these seven PNe. The first UV lines of interest are those of carbon. The resolved lines of C III] 1906.68 and 1908.73 yielded a direct measurement of the density within the volume occupied by doubly-ionized carbon and other similar co-spatial ions as well as contributed to an accurate measurement of the carbon abundance. Each PN spectrum was divided into smaller spatial regions or segments in order to assess inferred density variations among the regions along the entire slit. There is a clear difference in the inferred density for several regions of each PNe. Variations in electron temperature and chemical abundances were also probed and shown to be completely homogeneous within the errors. Lastly, these nebulae were modeled in detail with the photoionization code CLOUDY. This modeling constrained the central star parameters of temperature and luminosity and tested the effects different density profiles have on these parameters. We gratefully acknowledge generous support from NASA through grants related to the Cycle 19 program GO 12600, as well as from the University of Oklahoma.

Quantification of cell cycle kinetics by EdU (5-ethynyl-2′-deoxyuridine)-coupled-fluorescence-intensity analysis

PubMed Central

Cabrita, Marisa; Bekman, Evguenia; Braga, José; Rino, José; Santus, Renè; Filipe, Paulo L.; Sousa, Ana E.; Ferreira, João A.

2017-01-01

We propose a novel single-deoxynucleoside-based assay that is easy to perform and provides accurate values for the absolute length (in units of time) of each of the cell cycle stages (G1, S and G2/M). This flow-cytometric assay takes advantage of the excellent stoichiometric properties of azide-fluorochrome detection of DNA substituted with 5-ethynyl-2′-deoxyuridine (EdU). We show that by pulsing cells with EdU for incremental periods of time maximal EdU-coupled fluorescence is reached when pulsing times match the length of S phase. These pulsing times, allowing labelling for a full S phase of a fraction of cells in asynchronous populations, provide accurate values for the absolute length of S phase. We characterized additional, lower intensity signals that allowed quantification of the absolute durations of G1 and G2 phases. Importantly, using this novel assay data on the lengths of G1, S and G2/M phases are obtained in parallel. Therefore, these parameters can be estimated within a time frame that is shorter than a full cell cycle. This method, which we designate as EdU-Coupled Fluorescence Intensity (E-CFI) analysis, was successfully applied to cell types with distinctive cell cycle features and shows excellent agreement with established methodologies for analysis of cell cycle kinetics. PMID:28465489

Incubation temperature fluctuation does not affect incubation length and hatchling phenotype in the Chinese skink Plestiodon chinensis.

PubMed

Qu, Yan-Fu; Lu, Hong-Liang; Li, Hong; Ji, Xiang

2014-12-01

Studies examining the effects of incubation temperature fluctuation on the phenotype of hatchling reptiles have shown species variation. To examine whether incubation temperature fluctuation has a key role in influencing the phenotype of hatchling Chinese skinks (Plestiodon chinensis), we incubated eggs produced by 20 females under five thermal regimes (treatments). Eggs in three treatments were incubated in three incubators, one set constant at 27°C and two ramp-programmed at 27 ± 3°C and 27 ± 5°C on a cycle of 12h (+) and 12h (-). The remaining eggs were incubated in two chambers: one inside a room where temperatures varied from 23.0 to 31.1°C, with a mean of 27.0°C; the other outside the room where temperatures varied from 20.2 to 35.3°C, with a mean of 26.1°C. We found that: (1) for eggs at a given embryonic stage at ovipositon, the mean rather than the variance of incubation temperatures determined the length of incubation; (2) most (egg mass, embryonic stage at oviposition, incubation length and all examined hatchling traits except tail length and locomotor performance) of the examined variables were affected by clutch; and (3) body mass was the only hatchling trait that differed among the five treatments, but the differences were tiny. These findings suggest that incubation temperature fluctuation has no direct role in influencing incubation length and hatchling phenotype in P. chinensis. Copyright © 2014 Elsevier Ltd. All rights reserved.

Physiological assessment and path coefficient analysis to improve evaluation of alfalfa autotoxicity.

PubMed

Chon, Sang-Uk; Nelson, C Jerry; Coutts, John H

2003-11-01

Reseeding of alfalfa is affected until autotoxic chemicals break down or are dispersed, often requiring a year or more. Bioassays of seed germination and early seedling growth, on agar medium in petri dishes, were conducted to evaluate autotoxic responses of 20 alfalfa germplasms to water-soluble extracts of alfalfa leaf tissue. Root length, 120 hr after placing imbibed seed on agar, was more sensitive to the autotoxin(s) than was hypocotyl length, germination speed, and final germination percentage. Path coefficient analyses showed variation in root length had 7-17 times more effect than variation in hypocotyl length in determining autotoxic effects on total seedling length. Although variations in seed size and germination rate were negatively associated (P < 0.05) with final root length, the autotoxin had little effect on these factors relative to that on root length. Germplasms in the control differed (P < 0.05) in root length, requiring tolerance to be evaluated as percent of control. Germplasms, as percent of control, differed significantly (P < 0.05) at extract concentrations of 1.0 and 4.0 g l(-1), but the range and LSD were more favorable for selection at 1.0 g l(-1). Root length is appropriate for genetic assessments of tolerance to the autotoxin when expressed as percent of control.

From space weather toward space climate time scales: Substorm analysis from 1993 to 2008

NASA Astrophysics Data System (ADS)

Tanskanen, E. I.; Pulkkinen, T. I.; Viljanen, A.; Mursula, K.; Partamies, N.; Slavin, J. A.

2011-05-01

Magnetic activity in the Northern Hemisphere auroral region was examined during solar cycles 22 and 23 (1993-2008). Substorms were identified from ground-based magnetic field measurements by an automated search engine. On average, 550 substorms were observed per year, which gives in total about 9000 substorms. The interannual, seasonal and solar cycle-to-cycle variations of the substorm number (Rss), substorm duration (Tss), and peak amplitude (Ass) were examined. The declining phases of both solar cycles 22 and 23 were more active than the other solar cycle phases due to the enhanced solar wind speed. The spring substorms during the declining solar cycle phase (∣Ass,decl∣ = 500 nT) were 25% larger than the spring substorms during the ascending solar cycle years (∣Ass,acs∣ = 400 nT). The following seasonal variation was found: the most intense substorms occurred during spring and fall, the largest substorm frequency in the Northern Hemisphere winter, and the longest-duration substorms in summer. Furthermore, we found a winter-summer asymmetry in the substorm number and duration, which is speculated to be due to the variations in the ionospheric conductivity. The solar cycle-to-cycle variation was found in the yearly substorm number and peak amplitude. The decline from the peak substorm activity in 1994 and 2003 to the following minima took 3 years during solar cycle 22, while it took 6 years during solar cycle 23.

[Geographic variation of seed morphological traits of Picea schrenkiana var. tianschanica in Tianshan Mountains, Xinjiang of Northwest China].

PubMed

Liu, Gui-Feng; Zang, Run-Guo; Liu, Hua; Bai, Zhi-Qiang; Guo, Zhong-Jun; Ding, Yi

2012-06-01

Taking the Picea schrenkiana var. tianschanica forests at three sites with different longitudes (Zhaosu, Tianchi, and Qitai) in Tianshan Mountains as the objects, the cones were collected along an altitudinal gradient to analyze the variation of their seed morphological traits (seed scale length and width, seed scale length/width ratio, seed wing length and width, seed wing length/ width ratio, seed length and width, and seed length/width ratio). All the seed traits except seed width tended to decrease with increasing altitude. The seed traits except seed wing width, seed width, and seed length/width ratio all had significant negative correlations with altitude. Seed scale length and width and seed scale length/width ratio had significant positive correlations with longitude. Seed scale length, seed scale length/width ratio, and seed wing length/width ratio had significant negative correlations with slope degree. No significant correlations were observed between the seed traits except seed wing width and the slope aspect. Altitude was the main factor affecting the seed scale length, seed scale length/width ratio, and seed wing length/width ratio.

Adaptation of Organisms by Resonance of RNA Transcription with the Cellular Redox Cycle

NASA Technical Reports Server (NTRS)

Stolc, Viktor

2012-01-01

Sequence variation in organisms differs across the genome and the majority of mutations are caused by oxidation, yet its origin is not fully understood. It has also been shown that the reduction-oxidation reaction cycle is the fundamental biochemical cycle that coordinates the timing of all biochemical processes in that cell, including energy production, DNA replication, and RNA transcription. It is shown that the temporal resonance of transcriptome biosynthesis with the oscillating binary state of the reduction-oxidation reaction cycle serves as a basis for non-random sequence variation at specific genome-wide coordinates that change faster than by accumulation of chance mutations. This work demonstrates evidence for a universal, persistent and iterative feedback mechanism between the environment and heredity, whereby acquired variation between cell divisions can outweigh inherited variation.

Understanding the importance of permanent and transitory shocks at business cycle horizons for the UK

NASA Astrophysics Data System (ADS)

Narayan, Paresh Kumar

2008-05-01

The goal of this paper is to examine the relative importance of permanent and transitory shocks in explaining variations in macroeconomic aggregates for the UK at business cycle horizons. Using the common trend-common cycle restrictions, we estimate a variance decomposition of shocks, and find that over short horizons the bulk of the variations in income and consumption were due to permanent shocks while transitory shocks explain the bulk of the variations in investment. Our findings for income and consumption are consistent with real business cycle models which emphasize the role of aggregate supply shocks, while our findings for investment are consistent with the Keynesian school of thought, which emphasizes the role of aggregate demand shocks in explaining business cycles.

Combustion Instability in an Acid-Heptane Rocket with a Pressurized-Gas Propellant Pumping System

NASA Technical Reports Server (NTRS)

Tischler, Adelbert O.; Bellman, Donald R.

1951-01-01

Results of experimental measurements of low-frequency combustion instability of a 300-pound thrust acid-heptane rocket engine were compared to the trends predicted by an analysis of combustion instability in a rocket engine with a pressurized-gas propellant pumping system. The simplified analysis, which assumes a monopropellant model, was based on the concept of a combustion the delay occurring from the moment of propellant injection to the moment of propellant combustion. This combustion time delay was experimentally measured; the experimental values were of approximately half the magnitude predicted by the analysis. The pressure-fluctuation frequency for a rocket engine with a characteristic length of 100 inches and operated at a combustion-chamber pressure of 280 pounds per square inch absolute was 38 cycles per second; the analysis indicated. a frequency of 37 cycles per second. Increasing combustion-chamber characteristic length decreased the pressure-fluctuation frequency, in conformity to the analysis. Increasing the chamber operating pressure or increasing the injector pressure drop increased the frequency. These latter two effects are contrary to the analysis; the discrepancies are attributed to the conflict between the assumptions made to simplify the analysis and the experimental conditions. Oxidant-fuel ratio had no apparent effect on the experimentally measured pressure-fluctuation frequency for acid-heptane ratios from 3.0 to 7.0. The frequencies decreased with increased amplitude of the combustion-chamber pressure variations. The analysis indicated that if the combustion time delay were sufficiently short, low-frequency combustion instability would be eliminated.

Histological and morphological aspects of reproduction in the sandbar shark Carcharhinus plumbeus in the U.S. south-eastern Atlantic Ocean and Gulf of Mexico.

PubMed

Piercy, A N; Murie, D J; Gelsleichter, J J

2016-05-01

The reproduction of the sandbar shark Carcharhinus plumbeus in the U.S. south-eastern Atlantic Ocean including the Gulf of Mexico was examined using a combination of histological and morphological characteristics of C. plumbeus collected through fishery-dependent and -independent sampling programmes (n = 1,567). Indices of maturity were constructed using measurements of gonads, reproductive tracts and claspers, and sandbar sharks exhibited 50% maturity sizes of 140 and 148 cm fork length for males and females respectively. Gonado-somatic indices and variation in reproductive tract condition were used to determine seasonal trends in reproduction of mature C. plumbeus. Sandbar sharks have discrete seasonal reproductive cycles in which males produce sperm from January to May with a peak in May and females develop eggs from January to May with ovulation occurring in June. Females were shown to exhibit a >2 year reproductive cycle. Embryonic development was assessed through measurements of masses and lengths of uterine contents. Gestation was 12 months, from July to the following June, with parturition in late June. This research highlights a difference from previously reported data on the periodicity of female reproduction in C. plumbeus in the U.S. south-eastern Atlantic Ocean and Gulf of Mexico, which may have major effects on future C. plumbeus stock management. © 2016 The Fisheries Society of the British Isles.

Ignition and Performance Tests of Rocket-Based Combined Cycle Propulsion System

NASA Technical Reports Server (NTRS)

Anderson, William E.

2005-01-01

The ground testing of a Rocket Based Combined Cycle engine implementing the Simultaneous Mixing and Combustion scheme was performed at the direct-connect facility of Purdue University's High Pressure Laboratory. The fuel-rich exhaust of a JP-8/H2O2 thruster was mixed with compressed, metered air in a constant area, axisymmetric duct. The thruster was similar in design and function to that which will be used in the flight test series of Dryden's Ducted-Rocket Experiment. The determination of duct ignition limits was made based on the variation of secondary air flow rates and primary thruster equivalence ratios. Thrust augmentation and improvements in specific impulse were studied along with the pressure and temperature profiles of the duct to study mixing lengths and thermal choking. The occurrence of ignition was favored by lower rocket equivalence ratios. However, among ignition cases, better thrust and specific impulse performance were seen with higher equivalence ratios owing to the increased fuel available for combustion. Thrust and specific impulse improvements by factors of 1.2 to 1.7 were seen. The static pressure and temperature profiles allowed regions of mixing and heat addition to be identified. The mixing lengths were found to be shorter at lower rocket equivalence ratios. Total pressure measurements allowed plume-based calculation of thrust, which agreed with load-cell measured values to within 6.5-8.0%. The corresponding Mach Number profile indicated the flow was not thermally choked for the highest duct static pressure case.

Maternal ethnicity and variation of fetal femur length calculations when screening for Down syndrome.

PubMed

Kovac, Christine M; Brown, Jennifer A; Apodaca, Christina C; Napolitano, Peter G; Pierce, Brian; Patience, Troy; Hume, Roderick F; Calhoun, Byron C

2002-07-01

To determine whether current methods for detecting Down syndrome based on fetal femur length calculations are influenced by ethnicity. The study population consisted of all fetuses scanned between 14 and 20 completed weeks' gestation from April 1, 1997, to January 1, 2000. The expected femur length was calculated from the biparietal diameter. The variance from the expected femur length, compared with the biparietal diameter, was calculated, and the mean variations were compared by maternal race. Ethnic-specific formulas for expected femur length were derived by simple regression. There was a statistically significant difference in femur length in the Asian group compared with all other groups, as well as the white group compared with the black and Asian groups (P < .05). However, there was no significant difference between the black and Hispanic groups or the white and Hispanic groups. The Asian group had the largest variation, with the measured femur length being less than the expected femur length. All groups studied had a mean expected femur length less than the mean measured femur length. On the basis of the ethnic-specific formulas for femur length, there was a significant decrease in patients that would undergo further evaluation for Down syndrome. There is a significant difference in the mean expected femur length by biparietal diameter among fetuses in the second trimester with regard to ethnicity. Using ethnic-specific formulas for expected femur length can have a considerable impact on the use of sonographic risk factors for Down syndrome screening. Further data are required for use of femur length as a screening tool in the genetic sonogram.

Abnormal Uterine Bleeding FAQ

MedlinePlus

... Abnormal Uterine Bleeding • What is a normal menstrual cycle? • When is bleeding abnormal? • At what ages is ... abnormal bleeding? •Glossary What is a normal menstrual cycle? The normal length of the menstrual cycle is ...

Effect of muscle length on cross-bridge kinetics in intact cardiac trabeculae at body temperature.

PubMed

Milani-Nejad, Nima; Xu, Ying; Davis, Jonathan P; Campbell, Kenneth S; Janssen, Paul M L

2013-01-01

Dynamic force generation in cardiac muscle, which determines cardiac pumping activity, depends on both the number of sarcomeric cross-bridges and on their cycling kinetics. The Frank-Starling mechanism dictates that cardiac force development increases with increasing cardiac muscle length (corresponding to increased ventricular volume). It is, however, unclear to what extent this increase in cardiac muscle length affects the rate of cross-bridge cycling. Previous studies using permeabilized cardiac preparations, sub-physiological temperatures, or both have obtained conflicting results. Here, we developed a protocol that allowed us to reliably and reproducibly measure the rate of tension redevelopment (k(tr); which depends on the rate of cross-bridge cycling) in intact trabeculae at body temperature. Using K(+) contractures to induce a tonic level of force, we showed the k(tr) was slower in rabbit muscle (which contains predominantly β myosin) than in rat muscle (which contains predominantly α myosin). Analyses of k(tr) in rat muscle at optimal length (L(opt)) and 90% of optimal length (L(90)) revealed that k(tr) was significantly slower at L(opt) (27.7 ± 3.3 and 27.8 ± 3.0 s(-1) in duplicate analyses) than at L(90) (45.1 ± 7.6 and 47.5 ± 9.2 s(-1)). We therefore show that k(tr) can be measured in intact rat and rabbit cardiac trabeculae, and that the k(tr) decreases when muscles are stretched to their optimal length under near-physiological conditions, indicating that the Frank-Starling mechanism not only increases force but also affects cross-bridge cycling kinetics.

Seasonal Variation of High-Latitude Geomagnetic Activity in Individual Years

NASA Astrophysics Data System (ADS)

Tanskanen, E. I.; Hynönen, R.; Mursula, K.

2017-10-01

We study the seasonal variation of high-latitude geomagnetic activity in individual years in 1966-2014 (solar cycles 20-24) by identifying the most active and the second most active season based on westward electrojet indices AL (1966-2014) and IL (1995-2014). The annual maximum is found at either equinox in two thirds and at either solstice in one third of the years examined. The traditional two-equinox maximum pattern is found in roughly one fourth of the years. We found that the seasonal variation of high-latitude geomagnetic activity closely follows the solar wind speed. While the mechanisms leading to the two-equinox maxima pattern are in operation, the long-term change of solar wind speed tends to mask the effect of these mechanisms for individual years. Large cycle-to-cycle variation is found in the seasonal pattern: equinox maxima are more common during cycles 21 and 22 than in cycles 23 or 24. Exceptionally long winter dominance in high-latitude activity and solar wind speed is seen in the declining phase of cycle 23, after the appearance of the long-lasting low-latitude coronal hole.

Relative contributions of neutral and non-neutral processes to clinal variation in calyx lobe length in the series Sakawanum (Asarum: Aristolochiaceae).

PubMed

Takahashi, Daiki; Teramine, Tsutomu; Sakaguchi, Shota; Setoguchi, Hiroaki

2018-01-25

Clines, the gradual variation in measurable traits along a geographical axis, play a major role in evolution and can contribute to our understanding of the relative roles of selective and neutral process in trait variation. Using genetic and morphological analyses, the relative contributions of neutral and non-neutral processes were explored to infer the evolutionary history of species of the series Sakawanum (genus Asarum), which shows significant clinal variation in calyx lobe length. A total of 27 populations covering the natural geographical distribution of the series Sakawanum were sampled. Six nuclear microsatellite markers were used to investigate genetic structure and genetic diversity. The lengths of calyx lobes of multiple populations were measured to quantify their geographical and taxonomic differentiation. To detect the potential impact of selective pressure, morphological differentiation was compared with genetic differentiation (QCT-FST comparison). Average calyx lobe length of A. minamitanianum was 124.11 mm, while that of A. costatum was 13.80 mm. Though gradually changing along the geographical axis within series, calyx lobe lengths were significantly differentiated among the taxa. Genetic differentiation between taxa was low (FST = 0.099), but a significant geographical structure along the morphological cline was detected. Except for one taxon pair, pairwise QCT values were significantly higher than the neutral genetic measures of FST and G'ST. Divergent selection may have driven the calyx lobe length variation in series Sakawanum taxa, although the underlying mechanism is still not clear. The low genetic differentiation indicates recent divergence and/or gene flows between geographically close taxa. These neutral processes would also affect the clinal variation in calyx lobe lengths. Overall, this study implies the roles of population history and divergent selection in shaping the current cline of a flower trait in the series Sakawanum. © The Author(s) 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Ventilatory Cycle Measurements and Loop Gain in Central Apnea in Mining Drivers Exposed to Intermittent Altitude

PubMed Central

Rey de Castro, Jorge; Liendo, Alicia; Ortiz, Oswaldo; Rosales-Mayor, Edmundo; Liendo, César

2017-01-01

Study Objectives: By measuring the apnea length, ventilatory phase, respiratory cycle length, and loop gain, we can further characterize the central apneas of high altitude (CAHA). Methods: Sixty-three drivers of all-terrain vehicles, working in a Peruvian mine located at 2,020 meters above sea level (MASL), were evaluated. A respiratory polygraph was performed in the first night they slept at high altitude. None of the subjects were exposed to oxygen during the test or acetazolamide in the preceding days of the test. Results: Sixty-three respiratory polygraphs were performed, and 59 were considered for analysis. Forty-six (78%) were normal, 6 (10%) had OSA, and 7 (12%) had CAHA. Key data from subjects include: residing altitude: 341 ± 828 MASL, Lake Louise scoring: 0.4 ± 0.8, Epworth score: 3.4 ± 2.7, apneahypopnea index: 35.7 ± 19.3, CA index: 13.4 ± 14.2, CA length: 14.4 ± 3.6 sec, ventilatory length: 13.5 ± 2.9 sec, cycle length: 26.5 ± 4.0 sec, ventilatory length/CA length ratio 0.9 ± 0.3 and circulatory delay 13.3 ± 2.9 sec. Duty ratio media [ventilatory duration/cycle duration] was 0.522 ± 0 0.128 [0.308–0.700] and loop gain was calculated from the duty ratio utilizing this formula: LG = 2π / [(2πDR-sin(2πDR)]. All subjects have a high loop gain media 2.415 ± 1.761 [1.175–6.260]. Multiple correlations were established with loop gain values, but the only significant correlation detected was between central apnea index and loop gain. Conclusions: Twelve percent of the studied population had CAHA. Measurements of respiratory cycle in workers with CAHA are more similar to idiopathic central apneas rather than Hunter-Cheyne-Stokes respiration. Also, there was a high degree of correlation between severity of central apnea and the degree of loop gain. The abnormal breathing patterns in those subjects could affect the sleep quality and potentially increase the risk for work accidents. Citation: Rey de Castro J, Liendo A, Ortiz O, Rosales-Mayor E, Liendo C. Ventilatory cycle measurements and loop gain in central apnea in mining drivers exposed to intermittent altitude. J Clin Sleep Med. 2017;13(1):27–32. PMID:27707449

Seasonal Variation of Mass Transport Across the Tropopause

NASA Technical Reports Server (NTRS)

Appenzeller, Christof; Holton, James R.; Rosenlof, Karen H.

1996-01-01

The annual cycle of the net mass transport across the extratropical tropopause is examined. Contributions from both the global-scale meridional circulation and the mass variation of the lowermost stratosphere are included. For the northern hemisphere the mass of the lowermost stratosphere has a distinct annual cycle, whereas for the southern hemisphere, the corresponding variation is weak. The net mass transport across the tropopause in the northern hemisphere has a maximum in late spring and a distinct minimum in autumn. This variation and its magnitude compare well with older estimates based on representative Sr-90 mixing ratios. For the southern hemisphere the seasonal cycle of the net mass transport is weaker and follows roughly the annual variation of the net mass flux across a nearby isentropic surface.

Two Independent Contributions to Step Variability during Over-Ground Human Walking

PubMed Central

Collins, Steven H.; Kuo, Arthur D.

2013-01-01

Human walking exhibits small variations in both step length and step width, some of which may be related to active balance control. Lateral balance is thought to require integrative sensorimotor control through adjustment of step width rather than length, contributing to greater variability in step width. Here we propose that step length variations are largely explained by the typical human preference for step length to increase with walking speed, which itself normally exhibits some slow and spontaneous fluctuation. In contrast, step width variations should have little relation to speed if they are produced more for lateral balance. As a test, we examined hundreds of overground walking steps by healthy young adults (N = 14, age < 40 yrs.). We found that slow fluctuations in self-selected walking speed (2.3% coefficient of variation) could explain most of the variance in step length (59%, P < 0.01). The residual variability not explained by speed was small (1.5% coefficient of variation), suggesting that step length is actually quite precise if not for the slow speed fluctuations. Step width varied over faster time scales and was independent of speed fluctuations, with variance 4.3 times greater than that for step length (P < 0.01) after accounting for the speed effect. That difference was further magnified by walking with eyes closed, which appears detrimental to control of lateral balance. Humans appear to modulate fore-aft foot placement in precise accordance with slow fluctuations in walking speed, whereas the variability of lateral foot placement appears more closely related to balance. Step variability is separable in both direction and time scale into balance- and speed-related components. The separation of factors not related to balance may reveal which aspects of walking are most critical for the nervous system to control. PMID:24015308

Variation in torpor patterns of free-ranging black-tailed and Utah prairie dogs across gradients of elevation

USGS Publications Warehouse

Lehmer, E.M.; Biggins, D.E.

2005-01-01

We compared over-winter body temperature (Tb) patterns for more than 6 months in adult (> 1 year) black-tailed (Cynomys ludovicianus) and Utah (C. parvidens) prairie dogs from colonies located along gradients of elevation in northern Colorado and southern Utah. In general, black-tailed prairie dogs entered torpor facultatively during winter, whereas Utah prairie dogs hibernated continuously for extended periods. Both black-tailed and Utah prairie dogs displayed significant differences in Tb patterns across elevations, with lower elevation populations entering more shallow and infrequent torpor than prairie dogs at higher elevations. Tb patterns of black-tailed prairie dogs followed 24-h cycles, as most prairie dogs entered into and aroused from torpor between 1100 and 1700 h and bout lengths were clustered around 24-h intervals and multiples thereof. Torpor in Utah prairie dogs did not display the same daily patterns; they entered into and aroused from torpor at all times of the day, and bout lengths were variable. Although black-tailed and Utah prairie dogs are closely related, mechanisms that stimulate and control torpor might differ between them.

Hidden levels of phylodiversity in Antarctic green algae: further evidence for the existence of glacial refugia

PubMed Central

De Wever, Aaike; Leliaert, Frederik; Verleyen, Elie; Vanormelingen, Pieter; Van der Gucht, Katleen; Hodgson, Dominic A.; Sabbe, Koen; Vyverman, Wim

2009-01-01

Recent data revealed that metazoans such as mites and springtails have persisted in Antarctica throughout several glacial–interglacial cycles, which contradicts the existing paradigm that terrestrial life was wiped out by successive glacial events and that the current inhabitants are recent colonizers. We used molecular phylogenetic techniques to study Antarctic microchlorophyte strains isolated from lacustrine habitats from maritime and continental Antarctica. The 14 distinct chlorophycean and trebouxiophycean lineages observed point to a wide phylogenetic diversity of apparently endemic Antarctic lineages at different taxonomic levels. This supports the hypothesis that long-term survival took place in glacial refugia, resulting in a specific Antarctic flora. The majority of the lineages have estimated ages between 17 and 84 Ma and probably diverged from their closest relatives around the time of the opening of Drake Passage (30–45 Ma), while some lineages with longer branch lengths have estimated ages that precede the break-up of Gondwana. The variation in branch length and estimated age points to several independent but rare colonization events. PMID:19625320

Role of the vomeronasal organ on the estral cycle reduction by pheromones in the rat.

PubMed

Mora, O A; Sánchez-Criado, J E; Guisado, S

1985-09-01

The role of he vomeronasal organ on the estral cycle reduction induced by pheromones is studied in adult female wistar rats. The animals were divided in three groups: I, intact rats; II, vomeronasalectomized rats (VNX); and III, sham operated rats (sham). Each group was submitted to another three distinct conditions from the day they were weaned (21 days old): Isolated female rats; with male odors from two adult males of tested sexual potency, and isolated rats again. The isolated intact rats show mainly 5 day length cycles. The groups I and III (intacts and sham) with male odors, show 4 day length cycles. The VNX animals show 5 day cycles in any one experimental conditions. These results support the idea that the vomeronasal organ is the receptor of the male reducing cycle pheromone in the female rat.

Design of human controlled 1 DOF right hand exoskeleton using electromyography signal

NASA Astrophysics Data System (ADS)

Azzam, M.; Wijaya, S. K.; Prawito

2017-07-01

Exoskeleton in general is a structure that is anatomically designed to be able to accommodate the physical movement of its user and provide additional strength. The use of EMG signal to control a 1 DOF right arm exoskeleton is evaluated in this research. This research aims to achieve optimum control using EMG signal. EMG signal is a variation of voltage that occurs when muscle contracts hence its strong correlation with the user's intention of movement. The RMS values of each EMG signal that originates from bicep and tricep muscle are calculated and processed to determine the direction and speed of rotation of a DC motor that actuates the exoskeleton. The RMS calculation is conducted at various array length that will theoretically affect its accuracy. The difference between those two RMS values is then calculated and interpreted as the intention of flexion or extension movement that will control the DC motor rotational direction. The absolute value of the RMS difference multiplied with a gain factor is used to regulate the duty cycle of a PWM signal that is used to control the rotational speed of the DC motor. To achieve the smallest settling time, array length and gain factor were varied. The test was conducted in two stages, static and dynamic tests. The test result shows a trend where the settling time decreases when array length is shortened and gain is increased. It shows that optimum control can be achieved by selecting the right array length and gain.

Immunotoxic destruction of distinct catecholaminergic neuron populations disrupts the reproductive response to glucoprivation in female rats.

PubMed

I'Anson, Helen; Sundling, Lois A; Roland, Shannon M; Ritter, Sue

2003-10-01

We tested the hypothesis that hindbrain catecholamine (norepinephrine or epinephrine) neurons, in addition to their essential role in glucoprivic feeding, are responsible for suppressing estrous cycles during chronic glucoprivation. Normally cycling female rats were given bilateral injections of the retrogradely transported ribosomal toxin, saporin, conjugated to monoclonal dopamine beta-hydroxylase antibody (DSAP) into the paraventricular nucleus (PVN) of the hypothalamus to selectively destroy norepinephrine and epinephrine neurons projecting to the PVN. Controls were injected with unconjugated saporin. After recovery, we assessed the lesion effects on estrous cyclicity under basal conditions and found that DSAP did not alter estrous cycle length. Subsequently, we examined effects of chronic 2-deoxy-d-glucose-induced glucoprivation on cycle length. After two normal 4- to 5-d cycles, rats were injected with 2-deoxy-d-glucose (200 mg/kg every 6 h for 72 h) beginning 24 h after detection of estrus. Chronic glucoprivation increased cycle length in seven of eight unconjugated saporin rats but in only one of eight DSAP rats. Immunohistochemical results confirmed loss of dopamine beta-hydroxylase immunoreactivity in PVN. Thus, hindbrain catecholamine neurons with projections to the PVN are required for inhibition of reproductive function during chronic glucose deficit but are not required for normal estrous cyclicity when metabolic fuels are in abundance.

Prospective evaluation of luteal phase length and natural fertility.

PubMed

Crawford, Natalie M; Pritchard, David A; Herring, Amy H; Steiner, Anne Z

2017-03-01

To evaluate the impact of a short luteal phase on fecundity. Prospective time-to-pregnancy cohort study. Not applicable. Women trying to conceive, ages 30-44 years, without known infertility. Daily diaries, ovulation prediction testing, standardized pregnancy testing. Subsequent cycle fecundity. Included in the analysis were 1,635 cycles from 284 women. A short luteal phase (≤11 days including the day of ovulation) occurred in 18% of observed cycles. Mean luteal phase length was 14 days. Significantly more women with a short luteal phase were smokers. After adjustment for age, women with a short luteal phase had 0.82 times the odds of pregnancy in the subsequent cycle immediately following the short luteal phase compared with women without a short luteal phase. Women with a short luteal length in the first observed cycle had significantly lower fertility after the first 6 months of pregnancy attempt, but at 12 months there was no significant difference in cumulative probability of pregnancy. Although an isolated cycle with a short luteal phase may negatively affect short-term fertility, incidence of infertility at 12 months was not significantly higher among these women. NCT01028365. Copyright © 2016 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

Coupling of kinesin ATP turnover to translocation and microtubule regulation: one engine, many machines.

PubMed

Friel, Claire T; Howard, Jonathon

2012-12-01

The cycle of ATP turnover is integral to the action of motor proteins. Here we discuss how variation in this cycle leads to variation of function observed amongst members of the kinesin superfamily of microtubule associated motor proteins. Variation in the ATP turnover cycle among superfamily members can tune the characteristic kinesin motor to one of the range of microtubule-based functions performed by kinesins. The speed at which ATP is hydrolysed affects the speed of translocation. The ratio of rate constants of ATP turnover in relation to association and dissociation from the microtubule influence the processivity of translocation. Variation in the rate-limiting step of the cycle can reverse the way in which the motor domain interacts with the microtubule producing non-motile kinesins. Because the ATP turnover cycle is not fully understood for the majority of kinesins, much work remains to show how the kinesin engine functions in such a wide variety of molecular machines.

Large-scale evidence of dependency length minimization in 37 languages

PubMed Central

Futrell, Richard; Mahowald, Kyle; Gibson, Edward

2015-01-01

Explaining the variation between human languages and the constraints on that variation is a core goal of linguistics. In the last 20 y, it has been claimed that many striking universals of cross-linguistic variation follow from a hypothetical principle that dependency length—the distance between syntactically related words in a sentence—is minimized. Various models of human sentence production and comprehension predict that long dependencies are difficult or inefficient to process; minimizing dependency length thus enables effective communication without incurring processing difficulty. However, despite widespread application of this idea in theoretical, empirical, and practical work, there is not yet large-scale evidence that dependency length is actually minimized in real utterances across many languages; previous work has focused either on a small number of languages or on limited kinds of data about each language. Here, using parsed corpora of 37 diverse languages, we show that overall dependency lengths for all languages are shorter than conservative random baselines. The results strongly suggest that dependency length minimization is a universal quantitative property of human languages and support explanations of linguistic variation in terms of general properties of human information processing. PMID:26240370

Deterministic methods for multi-control fuel loading optimization

NASA Astrophysics Data System (ADS)

Rahman, Fariz B. Abdul

We have developed a multi-control fuel loading optimization code for pressurized water reactors based on deterministic methods. The objective is to flatten the fuel burnup profile, which maximizes overall energy production. The optimal control problem is formulated using the method of Lagrange multipliers and the direct adjoining approach for treatment of the inequality power peaking constraint. The optimality conditions are derived for a multi-dimensional multi-group optimal control problem via calculus of variations. Due to the Hamiltonian having a linear control, our optimal control problem is solved using the gradient method to minimize the Hamiltonian and a Newton step formulation to obtain the optimal control. We are able to satisfy the power peaking constraint during depletion with the control at beginning of cycle (BOC) by building the proper burnup path forward in time and utilizing the adjoint burnup to propagate the information back to the BOC. Our test results show that we are able to achieve our objective and satisfy the power peaking constraint during depletion using either the fissile enrichment or burnable poison as the control. Our fuel loading designs show an increase of 7.8 equivalent full power days (EFPDs) in cycle length compared with 517.4 EFPDs for the AP600 first cycle.

Effect of the length of the cycle on biodegradable polymer production and microbial community selection in a sequencing batch reactor.

PubMed

Dionisi, Davide; Majone, Mauro; Vallini, Giovanni; Gregorio, Simona Di; Beccari, Mario

2007-01-01

The effect of the length of the cycle on the enrichment and selection of mixed cultures in sequencing batch reactors (SBRs) has been studied, with the aim of biodegradable polymers (namely, polyhydroxyalkanoates (PHAs)) production from organic wastes. At a fixed feed concentration (20 gCOD/L) and organic loading rate (20 gCOD/L/day), the SBR was operated at different lengths of the cycle, in the range 1-8 h. Process performance was measured by considering the rates and yields of polymer storage and of the competing phenomenon of growth. The selected biomass was enriched with microorganisms that were able to store PHAs at high rates and yields only when the length of the cycle was 2 or 4 h, even though in these conditions the process was unstable. On the other hand, when the length of the cycle was 1 or 8 h, the dynamic response of the selected microorganisms was dominated by growth. The best process performance was characterized by storage rates in the range 500-600 mgCOD/gCOD/h and storage yields of 0.45-0.55 COD/COD. The corresponding productivity of the process was in the range 0.25-0.30 gPHA/L/h, the highest values obtained until now for mixed cultures. The microbial composition of the selected biomasses was analyzed through denaturing gradient gel electrophoresis (DGGE) and reverse-transcriptase denaturing gradient gel electrophoresis (RT-DGGE). The instability of the runs characterized by high storage rate was associated with a higher microbial heterogeneity compared to the runs with a stable growth response.

The cross-bridge dynamics is determined by two length-independent kinetics: Implications on muscle economy and Frank-Starling Law.

PubMed

Amiad Pavlov, Daria; Landesberg, Amir

2016-01-01

The cellular mechanisms underlying the Frank-Starling Law of the heart and the skeletal muscle force-length relationship are not clear. This study tested the effects of sarcomere length (SL) on the average force per cross-bridge and on the rate of cross-bridge cycling in intact rat cardiac trabeculae (n=9). SL was measured by laser diffraction and controlled with a fast servomotor to produce varying initial SLs. Tetanic contractions were induced by addition of cyclopiazonic acid, to maintain a constant activation. Stress decline and redevelopment in response to identical ramp shortenings, starting at various initial SLs, was analyzed. Both stress decline and redevelopment responses revealed two distinct kinetics: a fast and a slower phase. The duration of the rapid phases (4.2 ± 0.1 msec) was SL-independent. The second slower phase depicted a linear dependence of the rate of stress change on the instantaneous stress level. Identical slopes (70.5 ± 1.6 [1/s], p=0.33) were obtained during ramp shortening at all initial SLs, indicating that the force per cross-bridge and cross-bridge cycling kinetics are length-independent. A decrease in the slope at longer SLs was obtained during stress redevelopment, due to internal shortening. The first phase is attributed to rapid changes in the average force per cross-bridge. The second phase is ascribed to both cross-bridge cycling between its strong and weak conformations and to changes in the number of strong cross-bridges. Cross-bridge cycling kinetics and muscle economy are length-independent and the Frank-Starling Law cannot be attributed to changes in the force per cross-bridge or in the single cross-bridge cycling rates. Copyright © 2015 Elsevier Ltd. All rights reserved.

Effect of helium-neon laser irradiation on hair follicle growth cycle of Swiss albino mice.

PubMed

Shukla, S; Sahu, K; Verma, Y; Rao, K D; Dube, A; Gupta, P K

2010-01-01

We report the results of a study carried out to investigate the effect of helium-neon (He-Ne) laser (632.8 nm) irradiation on the hair follicle growth cycle of testosterone-treated and untreated mice. Both histology and optical coherence tomography (OCT) were used for the measurement of hair follicle length and the relative percentage of hair follicles in different growth phases. A positive correlation (R = 0.96) was observed for the lengths of hair follicles measured by both methods. Further, the ratios of the lengths of hair follicles in the anagen and catagen phases obtained by both methods were nearly the same. However, the length of the hair follicles measured by both methods differed by a factor of 1.6, with histology showing smaller lengths. He-Ne laser irradiation (at approximately 1 J/cm(2)) of the skin of both the control and the testosterone-treated mice was observed to lead to a significant increase (p < 0.05) in % anagen, indicating stimulation of hair growth. The study also demonstrates that OCT can be used to monitor the hair follicle growth cycle, and thus hair follicle disorders or treatment efficacy during alopecia. (c) 2009 S. Karger AG, Basel.

Long-term persistence of solar activity. [Abstract only

NASA Technical Reports Server (NTRS)

Ruzmaikin, Alexander; Feynman, Joan; Robinson, Paul

1994-01-01

The solar irradiance has been found to change by 0.1% over the recent solar cycle. A change of irradiance of about 0.5% is required to effect the Earth's climate. How frequently can a variation of this size be expected? We examine the question of the persistence of non-periodic variations in solar activity. The Huerst exponent, which characterizes the persistence of a time series (Mandelbrot and Wallis, 1969), is evaluated for the series of C-14 data for the time interval from about 6000 BC to 1950 AD (Stuiver and Pearson, 1986). We find a constant Huerst exponent, suggesting that solar activity in the frequency range of from 100 to 3000 years includes an important continuum component in addition to the well-known periodic variations. The value we calculate, H approximately equal to 0.8, is significantly larger than the value of 0.5 that would correspond to variations produced by a white-noise process. This value is in good agreement with the results for the monthly sunspot data reported elsewhere, indicating that the physics that produces the continuum is a correlated random process (Ruzmaikin et al., 1992), and that is is the same type of process over a wide range of time interval lengths. We conclude that the time period over which an irradiance change of 0.5% can be expected to occur is significantly shorter than that which would be expected for variations produced by a white-noise process.

Pollinator shifts and the evolution of spur length in the moth-pollinated orchid Platanthera bifolia.

PubMed

Boberg, Elin; Alexandersson, Ronny; Jonsson, Magdalena; Maad, Johanne; Ågren, Jon; Nilsson, L Anders

2014-01-01

Plant-pollinator interactions are thought to have shaped much of floral evolution. Yet the relative importance of pollinator shifts and coevolutionary interactions for among-population variation in floral traits in animal-pollinated species is poorly known. This study examined the adaptive significance of spur length in the moth-pollinated orchid Platanthera bifolia. Geographical variation in the length of the floral spur of P. bifolia was documented in relation to variation in the pollinator fauna across Scandinavia, and a reciprocal translocation experiment was conducted in south-east Sweden between a long-spurred woodland population and a short-spurred grassland population. Spur length and pollinator fauna varied among regions and habitats, and spur length was positively correlated with the proboscis length of local pollinators. In the reciprocal translocation experiment, long-spurred woodland plants had higher pollination success than short-spurred grassland plants at the woodland site, while no significant difference was observed at the grassland site. The results are consistent with the hypothesis that optimal floral phenotype varies with the morphology of the local pollinators, and that the evolution of spur length in P. bifolia has been largely driven by pollinator shifts.

Pollinator shifts and the evolution of spur length in the moth-pollinated orchid Platanthera bifolia

PubMed Central

Boberg, Elin; Alexandersson, Ronny; Jonsson, Magdalena; Maad, Johanne; Ågren, Jon; Nilsson, L. Anders

2014-01-01

Background and Aims Plant–pollinator interactions are thought to have shaped much of floral evolution. Yet the relative importance of pollinator shifts and coevolutionary interactions for among-population variation in floral traits in animal-pollinated species is poorly known. This study examined the adaptive significance of spur length in the moth-pollinated orchid Platanthera bifolia. Methods Geographical variation in the length of the floral spur of P. bifolia was documented in relation to variation in the pollinator fauna across Scandinavia, and a reciprocal translocation experiment was conducted in south-east Sweden between a long-spurred woodland population and a short-spurred grassland population. Key Results Spur length and pollinator fauna varied among regions and habitats, and spur length was positively correlated with the proboscis length of local pollinators. In the reciprocal translocation experiment, long-spurred woodland plants had higher pollination success than short-spurred grassland plants at the woodland site, while no significant difference was observed at the grassland site. Conclusions The results are consistent with the hypothesis that optimal floral phenotype varies with the morphology of the local pollinators, and that the evolution of spur length in P. bifolia has been largely driven by pollinator shifts. PMID:24169591

Solar UV Variations During the Decline of Cycle 23

NASA Technical Reports Server (NTRS)

DeLand, Matthew, T.; Cebula, Richard P.

2011-01-01

Characterization of temporal and spectral variations in solar ultraviolet irradiance over a solar cycle is essential for understanding the forcing of Earth's atmosphere and climate. Satellite measurements of solar UV variability for solar cycles 21, 22, and 23 show consistent solar cycle irradiance changes at key wavelengths (e.g. 205 nm, 250 nm) within instrumental uncertainties. All historical data sets also show the same relative spectral dependence for both short-term (rotational) and long-term (solar cycle) variations. Empirical solar irradiance models also produce long-term solar UV variations that agree well with observational data. Recent UV irradiance data from the Solar Radiation and Climate Experiment (SORCE) Spectral Irradiance Monitor (SIM) and Solar Stellar Irradiance Comparison Experiment (SOLSTICE) instruments covering the declining phase of Cycle 23 present a different picture oflong-term solar variations from previous results. Time series of SIM and SOLSTICE spectral irradiance data between 2003 and 2007 show solar variations that greatly exceed both previous measurements and predicted irradiance changes over this period, and the spectral dependence of the SIM and SOLSTICE variations during these years do not show features expected from solar physics theory. The use of SORCE irradiance variations in atmospheric models yields substantially different middle atmosphere ozone responses in both magnitude and vertical structure. However, short-term solar variability derived from SIM and SOLSTICE UV irradiance data is consistent with concurrent solar UV measurements from other instruments, as well as previous results, suggesting no change in solar physics. Our analysis of short-term solar variability is much less sensitive to residual instrument response changes than the observations of long-term variations. The SORCE long-term UV results can be explained by under-correction of instrument response changes during the first few years of measurements, rather than requiring an unexpected change in the physical behavior of the Sun.

Menstrual cycle perturbation by organohalogens and elements in the Cree of James Bay, Canada.

PubMed

Wainman, Bruce C; Kesner, James S; Martin, Ian D; Meadows, Juliana W; Krieg, Edward F; Nieboer, Evert; Tsuji, Leonard J

2016-04-01

Persistent organohalogens (POHs) and metals have been linked to alterations in menstrual cycle function and fertility in humans. The Cree First Nations people living near James Bay in Ontario and Quebec, Canada, have elevated levels of POHs, mercury and lead compared to other Canadians. The present study examines the interrelationships between selected POHs and elements on menstrual cycle function in these Cree women. Menstrual cycle characteristics were derived from structured daily diaries and endocrine measurements from daily urine samples collected during one cycle for 42 women age 19-42. We measured 31 POHs in blood plasma and 18 elements in whole blood, for 31 of the participants. POHs and elements detected in ≥ 70% of the participants were transformed by principal component (PC) analysis to reduce the contaminant exposure data to fewer, uncorrelated PCA variables. Multiple regression analysis revealed that, after adjusting for confounders, PC-3 values showed significant negative association with cycle length, after adjusting for confounders (p = 0.002). PC-3 accounted for 9.2% of the variance and shows positive loadings for cadmium, selenium, and PBDE congeners 47 and 153, and a negative loading for copper. Sensitivity analysis of the model to quantify likely effect sizes showed a range of menstrual cycle length from 25.3 to 28.3 days using the lower and upper 95% confidence limits of mean measured contaminant concentrations to predict cycle length. Our observations support the hypothesis that the menstrual cycle function of these women may be altered by exposure to POHs and elements from their environment. Copyright © 2015. Published by Elsevier Ltd.

Ventilatory Cycle Measurements and Loop Gain in Central Apnea in Mining Drivers Exposed to Intermittent Altitude.

PubMed

Rey de Castro, Jorge; Liendo, Alicia; Ortiz, Oswaldo; Rosales-Mayor, Edmundo; Liendo, César

2017-01-15

By measuring the apnea length, ventilatory phase, respiratory cycle length, and loop gain, we can further characterize the central apneas of high altitude (CAHA). Sixty-three drivers of all-terrain vehicles, working in a Peruvian mine located at 2,020 meters above sea level (MASL), were evaluated. A respiratory polygraph was performed in the first night they slept at high altitude. None of the subjects were exposed to oxygen during the test or acetazolamide in the preceding days of the test. Sixty-three respiratory polygraphs were performed, and 59 were considered for analysis. Forty-six (78%) were normal, 6 (10%) had OSA, and 7 (12%) had CAHA. Key data from subjects include: residing altitude: 341 ± 828 MASL, Lake Louise scoring: 0.4 ± 0.8, Epworth score: 3.4 ± 2.7, apneahypopnea index: 35.7 ± 19.3, CA index: 13.4 ± 14.2, CA length: 14.4 ± 3.6 sec, ventilatory length: 13.5 ± 2.9 sec, cycle length: 26.5 ± 4.0 sec, ventilatory length/CA length ratio 0.9 ± 0.3 and circulatory delay 13.3 ± 2.9 sec. Duty ratio media [ventilatory duration/cycle duration] was 0.522 ± 0 0.128 [0.308-0.700] and loop gain was calculated from the duty ratio utilizing this formula: LG = 2π / [(2πDR-sin(2πDR)]. All subjects have a high loop gain media 2.415 ± 1.761 [1.175-6.260]. Multiple correlations were established with loop gain values, but the only significant correlation detected was between central apnea index and loop gain. Twelve percent of the studied population had CAHA. Measurements of respiratory cycle in workers with CAHA are more similar to idiopathic central apneas rather than Hunter-Cheyne-Stokes respiration. Also, there was a high degree of correlation between severity of central apnea and the degree of loop gain. The abnormal breathing patterns in those subjects could affect the sleep quality and potentially increase the risk for work accidents. © 2017 American Academy of Sleep Medicine

CO2 Degassing Estimates from Rift Length Analysis since Pangea Fragmentation: A Key Component of the Deep Carbon Cycle?

NASA Astrophysics Data System (ADS)

Brune, S.; Williams, S.; Müller, D.

2017-12-01

The deep carbon cycle links the carbon content of crust and mantle to Earth's surface: extensional plate boundaries and arc volcanoes release CO2 to the ocean and atmosphere while subducted lithosphere carries carbon back into the mantle. The length of extensional and convergent plate boundaries therefore exerts first-order control on solid Earth CO2 degassing rates. Here we provide a global census of plate boundary length for the last 200 million years. Focusing on rift systems, we find that the most extensive rift phase during the fragmentation of Pangea occurred in the Jurassic/Early Cretaceous with more than 50.000 km of simultaneously active continental rifts. During the Late Cretaceous, in the aftermath of this pervasive rift episode, the global rift length dropped by 60% to 20,000 km. We further find that a second pronounced rift episode with global rift lengths of up to 30,000 km started in Eocene times. A close geological link between CO2 degassing and faulting has been documented in currently active rift systems worldwide. Regional-scale CO2 flux densities at rift segments in Africa, Europe, and New Zealand feature an annual average value of 200 t of CO2 per km2. Assuming that the release of CO2 scales with rift length, we show that rift-related CO2 degassing rates during the two major Mesozoic and Cenozoic rift episodes reached more than 300% of present-day values. Most importantly, the timing of enhanced CO2 degassing from continental rifts correlates with two well-known periods of elevated atmospheric CO2 in the Mesozoic and Cenozoic as evidenced by multiple independent proxy indicators. Compiling the length of other plate boundaries (mid-ocean ridges, subduction zones, continental arcs) through time, we do not reproduce such a correlation. Finally, we conduct numerical carbon cycle models that account for key feedback-mechanisms of the long-term carbon cycle. We find that only those models that feature a strong rift degassing component reproduce the timing and amplitude of the paleo-CO2 record. We therefore suggest that rift-related degassing constitutes a key component of the deep carbon cycle.

Unified risk analysis of fatigue failure in ductile alloy components during all three stages of fatigue crack evolution process.

PubMed

Patankar, Ravindra

2003-10-01

Statistical fatigue life of a ductile alloy specimen is traditionally divided into three stages, namely, crack nucleation, small crack growth, and large crack growth. Crack nucleation and small crack growth show a wide variation and hence a big spread on cycles versus crack length graph. Relatively, large crack growth shows a lesser variation. Therefore, different models are fitted to the different stages of the fatigue evolution process, thus treating different stages as different phenomena. With these independent models, it is impossible to predict one phenomenon based on the information available about the other phenomenon. Experimentally, it is easier to carry out crack length measurements of large cracks compared to nucleating cracks and small cracks. Thus, it is easier to collect statistical data for large crack growth compared to the painstaking effort it would take to collect statistical data for crack nucleation and small crack growth. This article presents a fracture mechanics-based stochastic model of fatigue crack growth in ductile alloys that are commonly encountered in mechanical structures and machine components. The model has been validated by Ray (1998) for crack propagation by various statistical fatigue data. Based on the model, this article proposes a technique to predict statistical information of fatigue crack nucleation and small crack growth properties that uses the statistical properties of large crack growth under constant amplitude stress excitation. The statistical properties of large crack growth under constant amplitude stress excitation can be obtained via experiments.

Intra-plant floral variation in Cleome viscosa L. and its possible significance in breeding system.

PubMed

Saroop, Shveta; Kaul, Veenu

2015-07-01

Cleome viscosa L., an annual rainy season weed, is cosmopolitan in distribution. Two naturally growing populations of C. viscosa from Jammu, J & K, India have been studied for floral variation at an intra-plant level and its possible role in its life cycle. Plants of both the populations bear flowers which exhibit tremendous intra-plant variation in size (large and small) and sex (hermaphrodite, staminate and pistillate). The average number of flowers per plant varied significantly and so did their structural and functional details. Greater propensity, however, was towards hermaphroditism at both plant and flower levels. The large and small sized flowers differed in their morphology and reproductive features; the former were significantly larger than the latter. Anthesis, anther dehiscence and stigma receptivity were coupled in all flower types. This functional aspect along with the structural proximity between stamens at two lengths and pistil further facilitated self-pollination. However, conspicuous floral display attracted diverse pollinator fauna (Apis dorsata, Halictus albescens, Nomia curvipes and N. elliotii) which in turn mediated cross pollination. Nevertheless, each floral type contributed towards plant's fitness in its own way. Hermaphrodite flowers exhibited both self and cross pollination and assured survival by setting fruits and seeds with the large sized counterparts more productive. All these floral variations seemed to impart flexibility to the pollination system and provide fitness over the short flowering season.

Solar Electromagnetic Radiation Study for Solar Cycle 22: Solar Ultraviolet Irradiance, 120 to 300 NM: Report of Working Groups 2 and 3 of SOLERS 22

NASA Technical Reports Server (NTRS)

Rottman, G. J.; Cebula, R. P.; Gillotay, D.; Simon, P. A.

1996-01-01

This report summarizes the activities of Working Group 2 and Working Group 3 of the SOLax Electromagnetic Radiation Study for Solar Cycle 22 (SOLERS22) Program. The international (SOLERS22) is Project 1.2 of the Solar-Terrestrial Energy Program (STEP) sponsored by SCOSTEP, a committee of the International Council of Scientific Unions). SOLERS22 is comprised of five Working Groups, each concentrating on a specific wave-length range: WG-1 - visible and infrared, WG-2 - mid-ultraviolet (200 < A < 300 nm), WG-3 - Far-ultraviolet (lambda greater than 100 and lambda less than 200 nanometers), WG-4 - extreme-ultraviolet (lambda greater than 10 and lambda less than 100 nm), and WG-5 - X-ray (lambda greater than 1 and lambda less than 10 nano meters). The overarching goals of SOLERS22 are to: 1) establish daily solar irradiance values in the specified wavelength ranges, 2) consider the evolving solar structures as the cause of temporal variations, and 3) understand the underlying physical processes driving these changes.

Modeling temperature entrainment of circadian clocks using the Arrhenius equation and a reconstructed model from Chlamydomonas reinhardtii.

PubMed

Heiland, Ines; Bodenstein, Christian; Hinze, Thomas; Weisheit, Olga; Ebenhoeh, Oliver; Mittag, Maria; Schuster, Stefan

2012-06-01

Endogenous circadian rhythms allow living organisms to anticipate daily variations in their natural environment. Temperature regulation and entrainment mechanisms of circadian clocks are still poorly understood. To better understand the molecular basis of these processes, we built a mathematical model based on experimental data examining temperature regulation of the circadian RNA-binding protein CHLAMY1 from the unicellular green alga Chlamydomonas reinhardtii, simulating the effect of temperature on the rates by applying the Arrhenius equation. Using numerical simulations, we demonstrate that our model is temperature-compensated and can be entrained to temperature cycles of various length and amplitude. The range of periods that allow entrainment of the model depends on the shape of the temperature cycles and is larger for sinusoidal compared to rectangular temperature curves. We show that the response to temperature of protein (de)phosphorylation rates play a key role in facilitating temperature entrainment of the oscillator in Chlamydomonas reinhardtii. We systematically investigated the response of our model to single temperature pulses to explain experimentally observed phase response curves.

Single source photoplethysmograph transducer for local pulse wave velocity measurement.

PubMed

Nabeel, P M; Joseph, Jayaraj; Awasthi, Vartika; Sivaprakasam, Mohanasankar

2016-08-01

Cuffless evaluation of arterial blood pressure (BP) using pulse wave velocity (PWV) has received attraction over the years. Local PWV based techniques for cuffless BP measurement has more potential in accurate estimation of BP parameters. In this work, we present the design and experimental validation of a novel single-source Photoplethysmograph (PPG) transducer for arterial blood pulse detection and cycle-to-cycle local PWV measurement. The ability of the transducer to continuously measure local PWV was verified using arterial flow phantom as well as by conducting an in-vivo study on 17 volunteers. The single-source PPG transducer could reliably acquire dual blood pulse waveforms, along small artery sections of length less than 28 mm. The transducer was able to perform repeatable measurements of carotid local PWV on multiple subjects with maximum beat-to-beat variation less than 12%. The correlation between measured carotid local PWV and brachial BP parameters were also investigated during the in-vivo study. Study results prove the potential use of newly proposed single-source PPG transducers in continuous cuffless BP measurement systems.

Spring-fall asymmetry of substorm strength, geomagnetic activity and solar wind: Implications for semiannual variation and solar hemispheric asymmetry

USGS Publications Warehouse

Marsula, K.; Tanskanen, E.; Love, J.J.

2011-01-01

We study the seasonal variation of substorms, geomagnetic activity and their solar wind drivers in 1993–2008. The number of substorms and substorm mean duration depict an annual variation with maxima in Winter and Summer, respectively, reflecting the annual change of the local ionosphere. In contradiction, substorm mean amplitude, substorm total efficiency and global geomagnetic activity show a dominant annual variation, with equinoctial maxima alternating between Spring in solar cycle 22 and Fall in cycle 23. The largest annual variations were found in 1994 and 2003, in the declining phase of the two cycles when high-speed streams dominate the solar wind. A similar, large annual variation is found in the solar wind driver of substorms and geomagnetic activity, which implies that the annual variation of substorm strength, substorm efficiency and geomagnetic activity is not due to ionospheric conditions but to a hemispherically asymmetric distribution of solar wind which varies from one cycle to another. Our results imply that the overall semiannual variation in global geomagnetic activity has been seriously overestimated, and is largely an artifact of the dominant annual variation with maxima alternating between Spring and Fall. The results also suggest an intimate connection between the asymmetry of solar magnetic fields and some of the largest geomagnetic disturbances, offering interesting new pathways for forecasting disturbances with a longer lead time to the future.

Diurnal and menstrual cycles in body temperature are regulated differently: a 28-day ambulatory study in healthy women with thermal discomfort of cold extremities and controls.

PubMed

Kräuchi, Kurt; Konieczka, Katarzyna; Roescheisen-Weich, Corina; Gompper, Britta; Hauenstein, Daniela; Schoetzau, Andreas; Fraenkl, Stephan; Flammer, Josef

2014-02-01

Diurnal cycle variations in body-heat loss and heat production, and their resulting core body temperature (CBT), are relatively well investigated; however, little is known about their variations across the menstrual cycle under ambulatory conditions. The main purpose of this study was to determine whether menstrual cycle variations in distal and proximal skin temperatures exhibit similar patterns to those of diurnal variations, with lower internal heat conductance when CBT is high, i.e. during the luteal phase. Furthermore, we tested these relationships in two groups of women, with and without thermal discomfort of cold extremities (TDCE). In total, 19 healthy eumenorrheic women with regular menstrual cycles (28-32 days), 9 with habitual TDCE (ages 29 ± 1.5 year; BMI 20.1 ± 0.4) and 10 controls without these symptoms (CON: aged 27 ± 0.8 year; BMI 22.7 ± 0.6; p < 0.004 different to TDCE) took part in the study. Twenty-eight days continuous ambulatory skin temperature measurements of distal (mean of hands and feet) and proximal (mean of sternum and infraclavicular regions) skin regions, thighs, and calves were carried out under real-life, ambulatory conditions (i-Buttons® skin probes, sampling rate: 2.5 min). The distal minus proximal skin temperature gradient (DPG) provided a valuable measure for heat redistribution from the core to the shell, and, hence, for internal heat conduction. Additionally, basal body temperature was measured sublingually directly after waking up in bed. Mean diurnal amplitudes in skin temperatures increased from proximal to distal skin regions and the 24-h mean values were inversely related. TDCE compared to CON showed significantly lower hand skin temperatures and DPG during daytime. However, menstrual cycle phase did not modify these diurnal patterns, indicating that menstrual and diurnal cycle variations in skin temperatures reveal additive effects. Most striking was the finding that all measured skin temperatures, together with basal body temperature, revealed a similar menstrual cycle variation (independent of BMI), with highest and lowest values during the luteal and follicular phases, respectively. These findings lead to the conclusion that in contrast to diurnal cycle, variations in CBT variation across the menstrual cycle cannot be explained by changes in internal heat conduction under ambulatory conditions. Although no measurements of metabolic heat production were carried out increased metabolic heat generation during the luteal phase seems to be the most plausible explanation for similar body temperature increases.

Granule size control and targeting in pulsed spray fluid bed granulation.

PubMed

Ehlers, Henrik; Liu, Anchang; Räikkönen, Heikki; Hatara, Juha; Antikainen, Osmo; Airaksinen, Sari; Heinämäki, Jyrki; Lou, Honxiang; Yliruusi, Jouko

2009-07-30

The primary aim of the study was to investigate the effects of pulsed liquid feed on granule size. The secondary aim was to increase knowledge of this technique in granule size targeting. Pulsed liquid feed refers to the pump changing between on- and off-positions in sequences, called duty cycles. One duty cycle consists of one on- and off-period. The study was performed with a laboratory-scale top-spray fluid bed granulator with duty cycle length and atomization pressure as studied variables. The liquid feed rate, amount and inlet air temperature were constant. The granules were small, indicating that the powder has only undergone ordered mixing, nucleation and early growth. The effect of atomizing pressure on granule size depends on inlet air relative humidity, with premature binder evaporation as a reason. The duty cycle length was of critical importance to the end product attributes, by defining the extent of intermittent drying and rewetting. By varying only the duty cycle length, it was possible to control granule nucleation and growth, with a wider granule size target range in increased relative humidity. The present study confirms that pulsed liquid feed in fluid bed granulation is a useful tool in end product particle size targeting.

Three-step method for menstrual and oral contraceptive cycle verification.

PubMed

Schaumberg, Mia A; Jenkins, David G; Janse de Jonge, Xanne A K; Emmerton, Lynne M; Skinner, Tina L

2017-11-01

Fluctuating endogenous and exogenous ovarian hormones may influence exercise parameters; yet control and verification of ovarian hormone status is rarely reported and limits current exercise science and sports medicine research. The purpose of this study was to determine the effectiveness of an individualised three-step method in identifying the mid-luteal or high hormone phase in endogenous and exogenous hormone cycles in recreationally-active women and determine hormone and demographic characteristics associated with unsuccessful classification. Cross-sectional study design. Fifty-four recreationally-active women who were either long-term oral contraceptive users (n=28) or experiencing regular natural menstrual cycles (n=26) completed step-wise menstrual mapping, urinary ovulation prediction testing and venous blood sampling for serum/plasma hormone analysis on two days, 6-12days after positive ovulation prediction to verify ovarian hormone concentrations. Mid-luteal phase was successfully verified in 100% of oral contraceptive users, and 70% of naturally-menstruating women. Thirty percent of participants were classified as luteal phase deficient; when excluded, the success of the method was 89%. Lower age, body fat and longer menstrual cycles were significantly associated with luteal phase deficiency. A step-wise method including menstrual cycle mapping, urinary ovulation prediction and serum/plasma hormone measurement was effective at verifying ovarian hormone status. Additional consideration of age, body fat and cycle length enhanced identification of luteal phase deficiency in physically-active women. These findings enable the development of stricter exclusion criteria for female participants in research studies and minimise the influence of ovarian hormone variations within sports and exercise science and medicine research. Copyright © 2016 Sports Medicine Australia. Published by Elsevier Ltd. All rights reserved.

Effects of approach lighting and variation in visible runway length on perception of approach angle simulated night landings.

DOT National Transportation Integrated Search

1982-02-01

Previous experiments have demonstrated illusions due to variations in both length and width of runways in nighttime 'black hole' approaches. Even though approach lighting is not designed to provide vertical guidance, it is possible that cues from app...

Reproductive cycle of Ensis magnus in the Ría de Pontevedra (NW Spain): Spatial variability and fisheries management implications

NASA Astrophysics Data System (ADS)

Hernández-Otero, A.; Martínez-Castro, C.; Vázquez, E.; Macho, G.

2014-08-01

Mesoscale differences in the reproductive cycle of the commercial sword razor clam Ensis magnus (Schumacher, 1817) were studied in six shellfish beds in the Ría de Pontevedra (NW Spain) between March 2008 and July 2010. The GCI accurately described the reproductive cycle as indicated by the histological analysis. Both methods showed that the reproductive cycle was similar at different sites and was characterized by a resting stage during summer and early autumn, initiation of gametogenesis in autumn and a period of successive spawning interspersed with gonad recovery during winter and spring. However, a 15-day to one month delay in advanced stages of gametogenesis and maturation was observed between the inner and the outermost site of the ria, as well as an extended spawning period in the outermost area. Lower bottom seawater temperatures at the outermost sites appeared to delay maturation and to prolong the spawning periods, whereas salinity fluctuations at the innermost sites appeared to reduce the length of the cycle. This study provides the first estimation of the size at which E. magnus reaches sexual maturity in the Iberian Peninsula, determined in 79 mm, and it is also the first work in determining the mesoscale variation in gonadal development of any species of the superfamily Solenoidea. The results highlight the importance of carrying out mesoscale studies of the reproductive biology in coastal fisheries resources. Some of the findings of the present study have already been applied in the rotation scheme of the fishery harvesting plan.

Flecainide attenuates rate adaptation of ventricular repolarization in guinea-pig heart.

PubMed

Osadchii, Oleg E

2016-01-01

Flecainide is class Ic antiarrhythmic agent that was found to increase the risk of sudden cardiac death. Arrhythmic responses to flecainide could be precipitated by exercise, suggesting a role played by inappropriate rate adaptation of ventricular repolarization. This study therefore examined flecainide effect on adaptation of the QT interval and ventricular action potential duration (APD) to abrupt reductions of the cardiac cycle length. ECG and ventricular epicardial and endocardial monophasic APD were recorded in isolated, perfused guinea-pig heart preparations upon a sustained cardiac acceleration (rapid pacing for 30 s), and following a single perturbation of the cycle length evoked by extrasystolic stimulation. Sustained increase in heart rate was associated with progressive bi-exponential shortening of the QT interval and APD. Flecainide prolonged ventricular repolarization, delayed its rate adaptation, and decreased the amplitude of QT interval and APD shortening upon rapid cardiac pacing. During extrasystolic stimulation, flecainide attenuated APD shortening in premature ventricular beats, with effect being greater upon using a longer basic drive cycle length (S1-S1=550 ms versus S1-S1=300 ms). Flecainide-induced arrhythmia may be partly accounted for by attenuated adaptation of ventricular repolarization to sudden changes in cardiac cycle length provoked by transient tachycardia or ectopic beats.

Diffusion length variation and proton damage coefficients for InP/In(x)Ga(1-x)As/GaAs solar cells

NASA Technical Reports Server (NTRS)

Jain, R. K.; Weinberg, I.; Flood, D. J.

1993-01-01

Indium phosphide solar cells are more radiation resistant than gallium arsenide and silicon solar cells, and their growth by heteroepitaxy offers additional advantages leading to the development of lighter, mechanically strong and cost-effective cells. Changes in heteroepitaxial InP cell efficiency under 0.5 and 3 MeV proton irradiations are explained by the variation in the minority-carrier diffusion length. The base diffusion length versus proton fluence is calculated by simulating the cell performance. The diffusion length damage coefficient K(L) is plotted as a function of proton fluence.

Characterisation of longitudinal variation in photonic crystal fibre

NASA Astrophysics Data System (ADS)

Francis-Jones, Robert J. A.; Mosley, Peter J.

2016-10-01

We present a method by which the degree of longitudinal variation in photonic crystal fibre (PCF) may be characterised through seeded four-wave mixing (FWM). Using an iterative numerical reconstruction, we created a model PCF that displays similar FWM phasematching properties across all measured length scales. Our results demonstrate that the structure of our PCF varies by less than 1% and that the characteristic length of the variations is approximately 15 cm.

Emergent multicellular life cycles in filamentous bacteria owing to density-dependent population dynamics.

PubMed

Rossetti, Valentina; Filippini, Manuela; Svercel, Miroslav; Barbour, A D; Bagheri, Homayoun C

2011-12-07

Filamentous bacteria are the oldest and simplest known multicellular life forms. By using computer simulations and experiments that address cell division in a filamentous context, we investigate some of the ecological factors that can lead to the emergence of a multicellular life cycle in filamentous life forms. The model predicts that if cell division and death rates are dependent on the density of cells in a population, a predictable cycle between short and long filament lengths is produced. During exponential growth, there will be a predominance of multicellular filaments, while at carrying capacity, the population converges to a predominance of short filaments and single cells. Model predictions are experimentally tested and confirmed in cultures of heterotrophic and phototrophic bacterial species. Furthermore, by developing a formulation of generation time in bacterial populations, it is shown that changes in generation time can alter length distributions. The theory predicts that given the same population growth curve and fitness, species with longer generation times have longer filaments during comparable population growth phases. Characterization of the environmental dependence of morphological properties such as length, and the number of cells per filament, helps in understanding the pre-existing conditions for the evolution of developmental cycles in simple multicellular organisms. Moreover, the theoretical prediction that strains with the same fitness can exhibit different lengths at comparable growth phases has important implications. It demonstrates that differences in fitness attributed to morphology are not the sole explanation for the evolution of life cycles dominated by multicellularity.

Coarsening of stripe patterns: variations with quench depth and scaling.

PubMed

Tripathi, Ashwani K; Kumar, Deepak

2015-02-01

The coarsening of stripe patterns when the system is evolved from random initial states is studied by varying the quench depth ε, which is a measure of distance from the transition point of the stripe phase. The dynamics of the growth of stripe order, which is characterized by two length scales, depends on the quench depth. The growth exponents of the two length scales vary continuously with ε. The decay exponents for free energy, stripe curvature, and densities of defects like grain boundaries and dislocations also show similar variation. This implies a breakdown of the standard picture of nonequilibrium dynamical scaling. In order to understand the variations with ε we propose an additional scaling with a length scale dependent on ε. The main contribution to this length scale comes from the "pinning potential," which is unique to systems where the order parameter is spatially periodic. The periodic order parameter gives rise to an ε-dependent potential, which can pin defects like grain boundaries, dislocations, etc. This additional scaling provides a compact description of variations of growth exponents with quench depth in terms of just one exponent for each of the length scales. The relaxation of free energy, stripe curvature, and the defect densities have also been related to these length scales. The study is done at zero temperature using Swift-Hohenberg equation in two dimensions.

Analysis of the weekly cycle in the atmosphere near Moscow

NASA Astrophysics Data System (ADS)

Gruzdev, A. N.

2013-03-01

Using the spectral method and the method of grouping by days of week, we analyzed the weekly cycles by standard air sounding data obtained at the Dolgoprudny station near Moscow and by the results of measurements of NO2 content in the stratosphere and the atmospheric boundary layer at the Zvenigorod Research Station of the Obukhov Institute of Atmospheric Physics, Russian Academy of Sciences, in 1990-2010. We revealed weekly cycles of the NO2 content in the vertical column of the stratosphere, temperature, geopotential, meridional wind velocity in the troposphere and lower stratosphere, and the tropopause height in the warm half of the year (mid-April to mid-October). The weekly variations in temperature in the troposphere are positive in the first half of the week and negative in the second half, and the variations in temperature in the tropopause layer and in the lower stratosphere are opposite in sign to the tropospheric variations. The weekly cycle of the tropopause height is approximately in phase with the cycle of tropospheric temperature, and the weekly cycle of the NO2 content in the stratospheric column is opposite in phase to the cycle of the tropopause height. Weekly variations were also observed in the total ozone content over Moscow. This finding was confirmed by calculations based on regression relationships between the vertical distribution of ozone and tropopause height. Conceptual mechanisms of weekly cycles were proposed.

Analysis of temporal variation in human masticatory cycles during gum chewing.

PubMed

Crane, Elizabeth A; Rothman, Edward D; Childers, David; Gerstner, Geoffrey E

2013-10-01

The study investigated modulation of fast and slow opening (FO, SO) and closing (FC, SC) chewing cycle phases using gum-chewing sequences in humans. Twenty-two healthy adult subjects participated by chewing gum for at least 20s on the right side and at least 20s on the left side while jaw movements were tracked with a 3D motion analysis system. Jaw movement data were digitized, and chewing cycle phases were identified and analysed for all chewing cycles in a complete sequence. All four chewing cycle phase durations were more variant than total cycle durations, a result found in other non-human primates. Significant negative correlations existed between the opening phases, SO and FO, and between the closing phases, SC and FC; however, there was less consistency in terms of which phases were negatively correlated both between subjects, and between chewing sides within subjects, compared with results reported in other species. The coordination of intra-cycle phases appears to be flexible and to follow complex rules during gum-chewing in humans. Alternatively, the observed intra-cycle phase relationships could simply reflect: (1) variation in jaw kinematics due to variation in how gum was handled by the tongue on a chew-by-chew basis in our experimental design or (2) by variation due to data sampling noise and/or how phases were defined and identified. Copyright © 2013 Elsevier Ltd. All rights reserved.

Cloning, characterization and functional analysis of a 1-FEH cDNA from Vernonia herbacea (Vell.) Rusby.

PubMed

Asega, Amanda Francine; do Nascimento, João Roberto O; Schroeven, Lindsey; Van den Ende, Wim; Carvalho, Maria Angela M

2008-08-01

Variations in the inulin contents have been detected in rhizophores of Vernonia herbacea during the phenological cycle. These variations indicate the occurrence of active inulin synthesis and depolymerization throughout the cycle and a role for this carbohydrate as a reserve compound. 1-Fructan exohydrolase (1-FEH) is the enzyme responsible for inulin depolymerization, and its activity has been detected in rhizophores of sprouting plants. Defoliation and low temperature are enhancer conditions of this 1-FEH activity. The aim of the present work was the cloning of this enzyme. Rhizophores were collected from plants induced to sprout, followed by storage at 5 degrees C. A full length 1-FEH cDNA sequence was obtained by PCR and inverse PCR techniques, and expressed in Pichia pastoris. Cold storage enhances FEH gene expression. Vh1-FEH was shown to be a functional 1-FEH, hydrolyzing predominantly beta-2,1 linkages, sharing high identity with chicory FEH sequences, and its activity was inhibited by 81% in the presence of 10 mM sucrose. In V. herbacea, low temperature and sucrose play a role in the control of fructan degradation. This is the first study concerning the cloning and functional analysis of a 1-FEH cDNA of a native species from the Brazilian Cerrado. Results will contribute to understanding the role of fructans in the establishment of a very successful fructan flora of the Brazilian Cerrado, subjected to water limitation and low temperature during winter.

The Quasi-biennial Oscillation and Annual Variations in Tropical Ozone from SHADOZ and HALOE

NASA Technical Reports Server (NTRS)

Witte, J. C.; Schoeberl, M. R.; Douglass, A. R.; Thompson, A. M.

2008-01-01

We examine the tropical ozone mixing ratio perturbation fields generated from a monthly ozone climatology using 1998 to 2006 ozonesonde data from the Southern Hemisphere Additional Ozonesondes (SHADOZ) network and the 13-year satellite record from 1993 to 2005 obtained from the Halogen Occultation Experiment (HALOE). The long time series and high vertical resolution of the ozone and temperature profiles from the SHADOZ sondes coupled with good tropical coverage north and south of the equator gives a detailed picture of the ozone structure in the lowermost stratosphere down through the tropopause where the picture obtained from HALOE measurements is blurred by coarse vertical resolution. Ozone perturbations respond to annual variations in the Brewer-Dobson Circulation (BDC) in the region just above the cold-point tropopause to around 20 km. Annual cycles in ozone and temperature are well correlated. Above 20 km, ozone and temperature perturbations are dominated by the Quasi-biennial Oscillation (QBO). Both satellite and sonde records show good agreement between positive and negative ozone mixing ratio anomalies and alternating QBO westerly and easterly wind shears from the Singapore rawinsondes with a mean periodicity of 26 months for SHADOZ and 25 months for HALOE. There is a temporal offset of one to three months with the QBO wind shear ahead of the ozone anomaly field. The meridional length scales for the annual cycle and the QBO, obtained using the temperature anomalies and wind shears in the thermal wind equation, compare well with theoretical calculations.

Multi-beam laser heterodyne measurement with ultra-precision for Young modulus based on oscillating mirror modulation

NASA Astrophysics Data System (ADS)

Li, Y. Chao; Ding, Q.; Gao, Y.; Ran, L. Ling; Yang, J. Ru; Liu, C. Yu; Wang, C. Hui; Sun, J. Feng

2014-07-01

This paper proposes a novel method of multi-beam laser heterodyne measurement for Young modulus. Based on Doppler effect and heterodyne technology, loaded the information of length variation to the frequency difference of the multi-beam laser heterodyne signal by the frequency modulation of the oscillating mirror, this method can obtain many values of length variation caused by mass variation after the multi-beam laser heterodyne signal demodulation simultaneously. Processing these values by weighted-average, it can obtain length variation accurately, and eventually obtain value of Young modulus of the sample by the calculation. This novel method is used to simulate measurement for Young modulus of wire under different mass by MATLAB, the obtained result shows that the relative measurement error of this method is just 0.3%.

Can uptake length in strams be determined by nutrient addition experiments? Results from an interbiome comparison study

Treesearch

P. J Mulholland; J. L. Tanks; J. R. Webster; W. B. Bowden; W. K Dodds; S. V. Gregory; N. B Grimm; J. L. Meriam; J. L. Meyer; B. J. Peterson; H. M. Valett; W. M. Wollheim

2002-01-01

Nutrient uptake length is an important parnmeter tor quantifying nutrient cycling in streams. Although nutrient tracer additions are the preierred method for measuring uptake length under ambient nutrient concentrations, short-term nutrient addition experiments have more irequently been used to estimate uptake length in streams. Theoretical analysis of the relationship...

Meridional Flow Variations in Cycles 23 and 24: Active Latitude Control of Sunspot Cycle Amplitudes

NASA Technical Reports Server (NTRS)

Hathaway, David H.; Upton, Lisa

2013-01-01

We have measured the meridional motions of magnetic elements observed in the photosphere over sunspot cycles 23 and 24 using magnetograms from SOHO/MDI and SDO/HMI. Our measurements confirm the finding of Komm, Howard, and Harvey (1993) that the poleward meridional flow weakens at cycle maxima. Our high spatial and temporal resolution analyses show that this variation is in the form of a superimposed inflow toward the active latitudes. This inflow is weaker in cycle 24 when compared to the inflow in 23, the stronger cycle. This systematic modulation of the meridional flow can modulate the amplitude of the following sunspot cycle through its influence on the Sun's polar fields.

Solar luminosity variations in solar cycle 21

NASA Technical Reports Server (NTRS)

Willson, Richard C.; Hudson, H. S.

1988-01-01

Long-term variations in the solar total irradiance found in the ACRIM I experiment on the SMM satellite have revealed a downward trend during the declining phase of solar cycle 21 of the sunspot cycle, a flat period between mid-1095 and mid-1987, and an upturn in late 1987 which suggests a direct correlation of luminosity and solar active region population. If the upturn continues into the activity maximum of solar cycle 22, a relation between solar activity and luminosity of possible climatological significance could be ascertained. The best-fit relationship for the variation of total irradiance S with sunspot number Rz and 10-cm flux F(10) are S = 1366.82 + 7.71 x 10 to the -3rd Rz and S = 1366.27 + 8.98 x 10 to the -3rd F(10)(W/sq m). These findings could be used to approximate total irradiance variations over the periods for which these indices have been compiled.

Coevolutionary elaboration of pollination-related traits in an alpine ginger (Roscoea purpurea) and a tabanid fly in the Nepalese Himalayas.

PubMed

Paudel, Babu Ram; Shrestha, Mani; Burd, Martin; Adhikari, Subodh; Sun, Yong-Shuai; Li, Qing-Jun

2016-09-01

Geographical variation in the interacting traits of plant-pollinator mutualism can lead to local adaptive differentiation. We tested Darwin's hypothesis of reciprocal selection as a key driving force for the evolution of floral traits of an alpine ginger (Roscoea purpurea) and proboscis length of a tabanid fly (Philoliche longirostris). We documented the pattern of trait variation in R. purpurea and P. longirostris across five populations. At each site, we quantified pollinator-mediated selection on floral display area, inflorescence height and corolla length of R. purpurea by comparing selection gradients for flowers exposed to natural pollination and to supplemental hand pollination. Reciprocal selection between plant and fly was examined at two sites via the relationship between proboscis length and nectar consumption (fly benefit) and corolla length and pollen deposition (plant benefit). Local corolla tube length was correlated with local fly proboscis length among the five sites. We found strong linear selection imposed by pollinators on corolla tube length at all sites, but there was no consistent relationship of fitness to inflorescence height or floral display area. Selection between corolla length and proboscis length was reciprocal at the two experimental sites examined. The geographical pattern of trait variation and the evidence of selection is consistent with a mosaic of local, species-specific reciprocal selection acting as the major driving force for the evolution of corolla length of R. purpurea and proboscis length of P. longirostris. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Size effects on miniature Stirling cycle cryocoolers

NASA Astrophysics Data System (ADS)

Yang, Xiaoqin; Chung, J. N.

2005-08-01

Size effects on the performance of Stirling cycle cryocoolers were investigated by examining each individual loss associated with the regenerator and combining these effects. For the fixed cycle parameters and given regenerator length scale, it was found that only for a specific range of the hydrodynamic diameter the system can produce net refrigeration and there is an optimum hydraulic diameter at which the maximum net refrigeration is achieved. When the hydraulic diameter is less than the optimum value, the regenerator performance is controlled by the pressure drop loss; when the hydraulic diameter is greater than the optimum value, the system performance is controlled by the thermal losses. It was also found that there exists an optimum ratio between the hydraulic diameter and the length of the regenerator that offers the maximum net refrigeration. As the regenerator length is decreased, the optimum hydraulic diameter-to-length ratio increases; and the system performance is increased that is controlled by the pressure drop loss and heat conduction loss. Choosing appropriate regenerator characteristic sizes in small-scale systems are more critical than in large-scale ones.

Solar cycle variations in mesospheric carbon monoxide

NASA Astrophysics Data System (ADS)

Lee, Jae N.; Wu, Dong L.; Ruzmaikin, Alexander; Fontenla, Juan

2018-05-01

As an extension of Lee et al. (2013), solar cycle variation of carbon monoxide (CO) is analyzed with MLS observation, which covers more than thirteen years (2004-2017) including maximum of solar cycle 24. Being produced primarily by the carbon dioxide (CO2) photolysis in the lower thermosphere, the variations of the mesospheric CO concentration are largely driven by the solar cycle modulated ultraviolet (UV) variation. This solar signal extends down to the lower altitudes by the dynamical descent in the winter polar vortex, showing a time lag that is consistent with the average descent velocity. To characterize a global distribution of the solar impact, MLS CO is correlated with the SORCE measured total solar irradiance (TSI) and UV. As high as 0.8 in most of the polar mesosphere, the linear correlation coefficients between CO and UV/TSI are more robust than those found in the previous work. The photochemical contribution explains most (68%) of the total variance of CO while the dynamical contribution accounts for 21% of the total variance at upper mesosphere. The photochemistry driven CO anomaly signal is extended in the tropics by vertical mixing. The solar cycle signal in CO is further examined with the Whole Atmosphere Community Climate Model (WACCM) 3.5 simulation by implementing two different modeled Spectral Solar Irradiances (SSIs): SRPM 2012 and NRLSSI. The model simulations underestimate the mean CO amount and solar cycle variations of CO, by a factor of 3, compared to those obtained from MLS observation. Different inputs of the solar spectrum have small impacts on CO variation.

A study of power cycles using supercritical carbon dioxide as the working fluid

NASA Astrophysics Data System (ADS)

Schroder, Andrew Urban

A real fluid heat engine power cycle analysis code has been developed for analyzing the zero dimensional performance of a general recuperated, recompression, precompression supercritical carbon dioxide power cycle with reheat and a unique shaft configuration. With the proposed shaft configuration, several smaller compressor-turbine pairs could be placed inside of a pressure vessel in order to avoid high speed, high pressure rotating seals. The small compressor-turbine pairs would share some resemblance with a turbocharger assembly. Variation in fluid properties within the heat exchangers is taken into account by discretizing zero dimensional heat exchangers. The cycle analysis code allows for multiple reheat stages, as well as an option for the main compressor to be powered by a dedicated turbine or an electrical motor. Variation in performance with respect to design heat exchanger pressure drops and minimum temperature differences, precompressor pressure ratio, main compressor pressure ratio, recompression mass fraction, main compressor inlet pressure, and low temperature recuperator mass fraction have been explored throughout a range of each design parameter. Turbomachinery isentropic efficiencies are implemented and the sensitivity of the cycle performance and the optimal design parameters is explored. Sensitivity of the cycle performance and optimal design parameters is studied with respect to the minimum heat rejection temperature and the maximum heat addition temperature. A hybrid stochastic and gradient based optimization technique has been used to optimize critical design parameters for maximum engine thermal efficiency. A parallel design exploration mode was also developed in order to rapidly conduct the parameter sweeps in this design space exploration. A cycle thermal efficiency of 49.6% is predicted with a 320K [47°C] minimum temperature and 923K [650°C] maximum temperature. The real fluid heat engine power cycle analysis code was expanded to study a theoretical recuperated Lenoir cycle using supercritical carbon dioxide as the working fluid. The real fluid cycle analysis code was also enhanced to study a combined cycle engine cascade. Two engine cascade configurations were studied. The first consisted of a traditional open loop gas turbine, coupled with a series of recuperated, recompression, precompression supercritical carbon dioxide power cycles, with a predicted combined cycle thermal efficiency of 65.0% using a peak temperature of 1,890K [1,617°C]. The second configuration consisted of a hybrid natural gas powered solid oxide fuel cell and gas turbine, coupled with a series of recuperated, recompression, precompression supercritical carbon dioxide power cycles, with a predicted combined cycle thermal efficiency of 73.1%. Both configurations had a minimum temperature of 306K [33°C]. The hybrid stochastic and gradient based optimization technique was used to optimize all engine design parameters for each engine in the cascade such that the entire engine cascade achieved the maximum thermal efficiency. The parallel design exploration mode was also utilized in order to understand the impact of different design parameters on the overall engine cascade thermal efficiency. Two dimensional conjugate heat transfer (CHT) numerical simulations of a straight, equal height channel heat exchanger using supercritical carbon dioxide were conducted at various Reynolds numbers and channel lengths.

Effects of airplane characteristics and takeoff noise and field length constraints on engine cycle selection for a Mach 2.32 cruise application

NASA Technical Reports Server (NTRS)

Whitlow, J. B., Jr.

1976-01-01

Sideline noise and takeoff field length were varied for two types of Mach 2.32 cruise airplane to determine their effect on engine cycle selection. One of these airplanes was the NASA/Langley-LTV arrow wing while the other was a Boeing modified delta-plus-tail derived from the earlier 2707-300 concept. Advanced variable cycle engines were considered. A more conventional advanced low bypass turbofan engine was used as a baseline for comparison. Appropriate exhaust nozzle modifications were assumed, where needed, to allow all engines to receive either an inherent co-annular or annular jet noise suppression benefit. All the VCE's out-performed the baseline engine by substantial margins in a design range comparison, regardless of airplane choice or takeoff restrictions. The choice among the three VCE's considered, however, depends on the field length, noise level, and airplane selected.

Mutational landscape of yeast mutator strains.

PubMed

Serero, Alexandre; Jubin, Claire; Loeillet, Sophie; Legoix-Né, Patricia; Nicolas, Alain G

2014-02-04

The acquisition of mutations is relevant to every aspect of genetics, including cancer and evolution of species on Darwinian selection. Genome variations arise from rare stochastic imperfections of cellular metabolism and deficiencies in maintenance genes. Here, we established the genome-wide spectrum of mutations that accumulate in a WT and in nine Saccharomyces cerevisiae mutator strains deficient for distinct genome maintenance processes: pol32Δ and rad27Δ (replication), msh2Δ (mismatch repair), tsa1Δ (oxidative stress), mre11Δ (recombination), mec1Δ tel1Δ (DNA damage/S-phase checkpoints), pif1Δ (maintenance of mitochondrial genome and telomere length), cac1Δ cac3Δ (nucleosome deposition), and clb5Δ (cell cycle progression). This study reveals the diversity, complexity, and ultimate unique nature of each mutational spectrum, composed of punctual mutations, chromosomal structural variations, and/or aneuploidies. The mutations produced in clb5Δ/CCNB1, mec1Δ/ATR, tel1Δ/ATM, and rad27Δ/FEN1 strains extensively reshape the genome, following a trajectory dependent on previous events. It comprises the transmission of unstable genomes that lead to colony mosaicisms. This comprehensive analytical approach of mutator defects provides a model to understand how genome variations might accumulate during clonal evolution of somatic cell populations, including tumor cells.

Frequency variations of the earth's obliquity and the 100-kyr ice-age cycles

NASA Technical Reports Server (NTRS)

Liu, Han-Shou

1992-01-01

Changes in the earth's climate are induced by variations in the earth's orbital parameters which modulate the seasonal distribution of solar radiation. Periodicities in the geological climate record with cycles of 100, 41, and 23 kyr have been linked with changes in obliquity, eccentricity, and precession of the equinoxes. The effect of variations of eccentricity during a 100 kyr period is weak relative to the signals from obliquity and precession variations and it may therefore be expected that the 100 kyr signal in the climate record would be of low intensity. However, this signal dominates the climate record and internal nonlinear processes within the climate system have previously been proposed to account for this fact. The author shows that variations in the frequency of the obliquity cycle can give rise to strong 100-kyr forcing of climate.

Length Variation, Heteroplasmy and Sequence Divergence in the Mitochondrial DNA of Four Species of Sturgeon (Acipenser)

PubMed Central

Brown, J. R.; Beckenbach, K.; Beckenbach, A. T.; Smith, M. J.

1996-01-01

The extent of mtDNA length variation and heteroplasmy as well as DNA sequences of the control region and two tRNA genes were determined for four North American sturgeon species: Acipenser transmontanus, A. medirostris, A. fulvescens and A. oxyrhnychus. Across the Continental Divide, a division in the occurrence of length variation and heteroplasmy was observed that was concordant with species biogeography as well as with phylogenies inferred from restriction fragment length polymorphisms (RFLP) of whole mtDNA and pairwise comparisons of unique sequences of the control region. In all species, mtDNA length variation was due to repeated arrays of 78-82-bp sequences each containing a D-loop strand synthesis termination associated sequence (TAS). Individual repeats showed greater sequence conservation within individuals and species rather than between species, which is suggestive of concerted evolution. Differences in the frequencies of multiple copy genomes and heteroplasmy among the four species may be ascribed to differences in the rates of recurrent mutation. A mechanism that may offset the high rate of mutation for increased copy number is suggested on the basis that an increase in the number of functional TAS motifs might reduce the frequency of successfully initiated H-strand replications. PMID:8852850

Spring-fall asymmetry of substorm strength, geomagnetic activity and solar wind: Implications for semiannual variation and solar hemispheric asymmetry

USGS Publications Warehouse

Mursula, K.; Tanskanen, E.; Love, J.J.

2011-01-01

We study the seasonal variation of substorms, geomagnetic activity and their solar wind drivers in 1993-2008. The number of substorms and substorm mean duration depict an annual variation with maxima in Winter and Summer, respectively, reflecting the annual change of the local ionosphere. In contradiction, substorm mean amplitude, substorm total efficiency and global geomagnetic activity show a dominant annual variation, with equinoctial maxima alternating between Spring in solar cycle 22 and Fall in cycle 23. The largest annual variations were found in 1994 and 2003, in the declining phase of the two cycles when high-speed streams dominate the solar wind. A similar, large annual variation is found in the solar wind driver of substorms and geomagnetic activity, which implies that the annual variation of substorm strength, substorm efficiency and geomagnetic activity is not due to ionospheric conditions but to a hemispherically asymmetric distribution of solar wind which varies from one cycle to another. Our results imply that the overall semiannual variation in global geomagnetic activity has been seriously overestimated, and is largely an artifact of the dominant annual variation with maxima alternating between Spring and Fall. The results also suggest an intimate connection between the asymmetry of solar magnetic fields and some of the largest geomagnetic disturbances, offering interesting new pathways for forecasting disturbances with a longer lead time to the future. Copyright ?? 2011 by the American Geophysical Union.

Spatial variations in annual cycles of body-size spectra of planktonic ciliates and their environmental drivers in marine ecosystems.

PubMed

Xu, Henglong; Jiang, Yong; Xu, Guangjian

2016-11-15

Body-size spectra has proved to be a useful taxon-free resolution to summarize a community structure for bioassessment. The spatial variations in annual cycles of body-size spectra of planktonic ciliates and their environmental drivers were studied based on an annual dataset. Samples were biweekly collected at five stations in a bay of the Yellow Sea, northern China during a 1-year cycle. Based on a multivariate approach, the second-stage analysis, it was shown that the annual cycles of the body-size spectra were significantly different among five sampling stations. Correlation analysis demonstrated that the spatial variations in the body-size spectra were significantly related to changes of environmental conditions, especially dissolved nitrogen, alone or in combination with salinity and dissolve oxygen. Based on results, it is suggested that the nutrients may be the environmental drivers to shape the spatial variations in annual cycles of planktonic ciliates in terms of body-size spectra in marine ecosystems. Copyright © 2016 Elsevier Ltd. All rights reserved.

Extensive length variation in the ribosomal DNA intergenic spacer of yellow perch (Perca flavescens).

PubMed

Kakou, Bidénam; Angers, Bernard; Glémet, Hélène

2016-03-01

The intergenic spacer (IGS) is located between ribosomal RNA (rRNA) gene copies. Within the IGS, regulatory elements for rRNA gene transcription are found, as well as a varying number of other repetitive elements that are at the root of IGS length heterogeneity. This heterogeneity has been shown to have a functional significance through its effect on growth rate. Here, we present the structural organization of yellow perch (Perca flavescens) IGS based on its entire sequence, as well as the IGS length variation within a natural population. Yellow perch IGS structure has four discrete regions containing tandem repeat elements. For three of these regions, no specific length class was detected as allele size was seemingly normally distributed. However, for one repeat region, PCR amplification uncovered the presence of two distinctive IGS variants representing a length difference of 1116 bp. This repeat region was also devoid of any CpG sites despite a high GC content. Balanced selection may be holding the alleles in the population and would account for the high diversity of length variants observed for adjacent regions. Our study is an important precursor for further work aiming to assess the role of IGS length variation in influencing growth rate in fish.

On the Relationship Between Global Land-Ocean Temperature and Various Descriptors of Solar-Geomagnetic Activity and Climate

NASA Technical Reports Server (NTRS)

Wilson, Robert M.

2014-01-01

Examined are sunspot cycle- (SC-) length averages of the annual January-December values of the Global Land-Ocean Temperature Index () in relation to SC-length averages of annual values of various descriptors of solar-geomagnetic activity and climate, incorporating lags of 0-5 yr. For the overall interval SC12-SC23, the is inferred to correlate best against the parameter incorporating lag = 5 yr, where the parameter refers to the resultant aa value having removed that portion of the annual aa average value due to the yearly variation of sunspot number (SSN). The inferred correlation between the and is statistically important at confidence level cl > 99.9%, having a coefficient of linear correlation r = 0.865 and standard error of estimate se = 0.149 degC. Excluding the most recent cycles SC22 and SC23, the inferred correlation is stronger, having r = 0.969 and se = 0.048 degC. With respect to the overall trend in the , which has been upwards towards warmer temperatures since SC12 (1878-1888), solar-geomagnetic activity parameters are now trending downwards (since SC19). For SC20-SC23, in contrast, comparison of the against SC-length averages of the annual value of the Mauna Loa carbon dioxide () index is found to be highly statistically important (cl >> 99.9%), having r = 0.9994 and se = 0.012 degC for lag = 2 yr. On the basis of the inferred preferential linear correlation between the and , the current ongoing SC24 is inferred to have warmer than was seen in SC23 (i.e., >0.526 degC), probably in excess of 0.68 degC (relative to the 1951-1980 base period).

The detection and stabilisation of limit cycle for deterministic finite automata

NASA Astrophysics Data System (ADS)

Han, Xiaoguang; Chen, Zengqiang; Liu, Zhongxin; Zhang, Qing

2018-04-01

In this paper, the topological structure properties of deterministic finite automata (DFA), under the framework of the semi-tensor product of matrices, are investigated. First, the dynamics of DFA are converted into a new algebraic form as a discrete-time linear system by means of Boolean algebra. Using this algebraic description, the approach of calculating the limit cycles of different lengths is given. Second, we present two fundamental concepts, namely, domain of attraction of limit cycle and prereachability set. Based on the prereachability set, an explicit solution of calculating domain of attraction of a limit cycle is completely characterised. Third, we define the globally attractive limit cycle, and then the necessary and sufficient condition for verifying whether all state trajectories of a DFA enter a given limit cycle in a finite number of transitions is given. Fourth, the problem of whether a DFA can be stabilised to a limit cycle by the state feedback controller is discussed. Criteria for limit cycle-stabilisation are established. All state feedback controllers which implement the minimal length trajectories from each state to the limit cycle are obtained by using the proposed algorithm. Finally, an illustrative example is presented to show the theoretical results.

Diffusion length variation in 0.5- and 3-MeV-proton-irradiated, heteroepitaxial indium phosphide solar cells

NASA Technical Reports Server (NTRS)

Jain, Raj K.; Weinberg, Irving; Flood, Dennis J.

1993-01-01

Indium phosphide (InP) solar cells are more radiation resistant than gallium arsenide (GaAs) and silicon (Si) solar cells, and their growth by heteroepitaxy offers additional advantages leading to the development of light weight, mechanically strong, and cost-effective cells. Changes in heteroepitaxial InP cell efficiency under 0.5- and 3-MeV proton irradiations have been explained by the variation in the minority-carrier diffusion length. The base diffusion length versus proton fluence was calculated by simulating the cell performance. The diffusion length damage coefficient, K(sub L), was also plotted as a function of proton fluence.

Centrifugation effects on estrous cycle, mating success and pregnancy outcome in rats

NASA Astrophysics Data System (ADS)

Ronca, April E.; Rushing, Linda; Tou, Janet; Wade, Charles E.; Baer, Lisa A.

2005-08-01

We analyzed the effects of 2-g centrifugation on estrous cycling, mating success and pregnancy outcome in rats. Sexually mature female and male rats were assigned to either 2-g centrifuge or non-centrifuge conditions, and to non-breeding or breeding conditions. In non-breeding females, estrous cycles were analyzed by examining vaginal cytology before and for 35 days during centrifugation. Breeding females were time-mated following 7 days of adaptation to centrifugation. Following adaptation to centrifugation, estrous cycle duration over a five-cycle period was similar in centrifuged and non-centrifuged females. Identical numbers of centrifuged and non-centrifuged females conceived, however centrifuged females took four-times longer than controls to achieve conception. Births occurred at the normal gestational length. Pup birth weight and postnatal survival were p<0.05 reduced in centrifuged as compared to non-centrifuged groups. In conclusion, 2-g centrifugation had no effect on estrus cycle length or the probably of becoming pregnant but delayed conception and diminished pregnancy outcome.

Centrifugation Effects on Estrous Cycling, Mating Success and Pregnancy Outcome in Rats

NASA Technical Reports Server (NTRS)

Ronca, April E.; Rushing, Linda S.; Tou, Janet; Wade, Charles E.; Baer, Lisa A.

2005-01-01

We analyzed the effects of 2-g centrifugation on estrous cycling, mating success and pregnancy outcome in rats. Sexually mature female and male rats were assigned to either 2-g centrifuge or non-centrifuge conditions, and to non-breeding or breeding conditions. In non-breeding females, estrous cycles were analyzed by examining vaginal cytology before and for 35 days during centrifugation. Breeding females were time-mated following 7 days of adaptation to centrifugation. Following adaptation to centrifugation, estrous cycle duration over a five-cycle period was similar in centrifuged and non-centrifuged females. Identical numbers of centrifuged and non-centrifuged females conceived, however centrifuged females took four-times longer than controls to achieve conception. Births occurred at the normal gestational length. Pup birth weight and postnatal survival were p<0.05 reduced in centrifuged as compared to non-centrifuged groups. In conclusion, 2-g centrifugation had no effect on estrous cycle length or the probably of becoming pregnant but delayed conception and diminished pregnancy outcome.

Changes in fat distribution (WHR) and body weight across the menstrual cycle.

PubMed

Kirchengast, S; Gartner, M

2002-12-01

The aim of the present study was to analyze changes of the body weight and waist-to-hip ratio during menstrual cycle, with special respect to changes around ovulation. 32 healthy young women ranging in age between 19 and 30 years (X = 23.5) were enrolled in the study. Beside a basal anthropometric investigation (stature, weight, BMI, waist circumference, hip circumference, fat percentage, waist to hip ratio) the probands were instructed to take body weight, waist and hip circumference and basal body temperature every morning by themselves over a whole cycle. Three proband groups according to cycle length (average, short and long) were defined and eight hormonal contraceptive users served as controls. It turned out that body weight increased only slightly during the second cycle half in all proband groups. A marked decrease of WHR around the time of ovulation was found in the proband group who exhibited average cycle length and a successful ovulation could be assumed. Evolutionary and physiological explanations are discussed.

Deciphering life history transcriptomes in different environments

PubMed Central

Etges, William J.; Trotter, Meredith V.; de Oliveira, Cássia C.; Rajpurohit, Subhash; Gibbs, Allen G.; Tuljapurkar, Shripad

2014-01-01

We compared whole transcriptome variation in six preadult stages and seven adult female ages in two populations of cactophilic Drosophila mojavensis reared on two host plants in order to understand how differences in gene expression influence standing life history variation. We used Singular Value Decomposition (SVD) to identify dominant trajectories of life cycle gene expression variation, performed pair-wise comparisons of stage and age differences in gene expression across the life cycle, identified when genes exhibited maximum levels of life cycle gene expression, and assessed population and host cactus effects on gene expression. Life cycle SVD analysis returned four significant components of transcriptional variation, revealing functional enrichment of genes responsible for growth, metabolic function, sensory perception, neural function, translation and aging. Host cactus effects on female gene expression revealed population and stage specific differences, including significant host plant effects on larval metabolism and development, as well as adult neurotransmitter binding and courtship behavior gene expression levels. In 3 - 6 day old virgin females, significant up-regulation of genes associated with meiosis and oogenesis was accompanied by down-regulation of genes associated with somatic maintenance, evidence for a life history tradeoff. The transcriptome of D. mojavensis reared in natural environments throughout its life cycle revealed core developmental transitions and genome wide influences on life history variation in natural populations. PMID:25442828

Utterance rate and linguistic properties as determinants of lexical dysfluencies in children who stutter

PubMed Central

Howell, Peter; Au-Yeung, James; Pilgrim, Lesley

2007-01-01

Two important determinants of variation in stuttering frequency are utterance rate and the linguistic properties of the words being spoken. Little is known how these determinants interrelate. It is hypothesized that those linguistic factors that lead to change in word duration, alter utterance rate locally within an utterance that then gives rise to an increase in stuttering frequency. According to the hypothesis, utterance rate variation should occur locally within the linguistic segments in an utterance that is known to increase the likelihood of stuttering. The hypothesis is tested using length of tone unit as the linguistic factor. Three predictions are confirmed: Utterance rate varies locally within the tone units and this local variation affects stuttering frequency; stuttering frequency is positively related to the length of tone units; variations in utterance rate are correlated with tone unit length. Alternative theoretical formulations of these findings are considered. PMID:9921672

Numerical investigation of multi-beam laser heterodyne measurement with ultra-precision for linear expansion coefficient of metal based on oscillating mirror modulation

NASA Astrophysics Data System (ADS)

Li, Yan-Chao; Wang, Chun-Hui; Qu, Yang; Gao, Long; Cong, Hai-Fang; Yang, Yan-Ling; Gao, Jie; Wang, Ao-You

2011-01-01

This paper proposes a novel method of multi-beam laser heterodyne measurement for metal linear expansion coefficient. Based on the Doppler effect and heterodyne technology, the information is loaded of length variation to the frequency difference of the multi-beam laser heterodyne signal by the frequency modulation of the oscillating mirror, this method can obtain many values of length variation caused by temperature variation after the multi-beam laser heterodyne signal demodulation simultaneously. Processing these values by weighted-average, it can obtain length variation accurately, and eventually obtain the value of linear expansion coefficient of metal by the calculation. This novel method is used to simulate measurement for linear expansion coefficient of metal rod under different temperatures by MATLAB, the obtained result shows that the relative measurement error of this method is just 0.4%.

Atlantic Bluefin Tuna (Thunnus thynnus) Biometrics and Condition.

PubMed

Rodriguez-Marin, Enrique; Ortiz, Mauricio; Ortiz de Urbina, José María; Quelle, Pablo; Walter, John; Abid, Noureddine; Addis, Piero; Alot, Enrique; Andrushchenko, Irene; Deguara, Simeon; Di Natale, Antonio; Gatt, Mark; Golet, Walter; Karakulak, Saadet; Kimoto, Ai; Macias, David; Saber, Samar; Santos, Miguel Neves; Zarrad, Rafik

2015-01-01

The compiled data for this study represents the first Atlantic and Mediterranean-wide effort to pool all available biometric data for Atlantic bluefin tuna (Thunnus thynnus) with the collaboration of many countries and scientific groups. Biometric relationships were based on an extensive sampling (over 140,000 fish sampled), covering most of the fishing areas for this species in the North Atlantic Ocean and Mediterranean Sea. Sensitivity analyses were carried out to evaluate the representativeness of sampling and explore the most adequate procedure to fit the weight-length relationship (WLR). The selected model for the WLRs by stock included standardized data series (common measurement types) weighted by the inverse variability. There was little difference between annual stock-specific round weight-straight fork length relationships, with an overall difference of 6% in weight. The predicted weight by month was estimated as an additional component in the exponent of the weight-length function. The analyses of monthly variations of fish condition by stock, maturity state and geographic area reflect annual cycles of spawning and feeding behavior. We update and improve upon the biometric relationships for bluefin currently used by the International Commission for the Conservation of Atlantic Tunas, by incorporating substantially larger datasets than ever previously compiled, providing complete documentation of sources and employing robust statistical fitting. WLRs and other conversion factors estimated in this study differ from the ones used in previous bluefin stock assessments.

The Frank-Starling mechanism involves deceleration of cross-bridge kinetics and is preserved in failing human right ventricular myocardium.

PubMed

Milani-Nejad, Nima; Canan, Benjamin D; Elnakish, Mohammad T; Davis, Jonathan P; Chung, Jae-Hoon; Fedorov, Vadim V; Binkley, Philip F; Higgins, Robert S D; Kilic, Ahmet; Mohler, Peter J; Janssen, Paul M L

2015-12-15

Cross-bridge cycling rate is an important determinant of cardiac output, and its alteration can potentially contribute to reduced output in heart failure patients. Additionally, animal studies suggest that this rate can be regulated by muscle length. The purpose of this study was to investigate cross-bridge cycling rate and its regulation by muscle length under near-physiological conditions in intact right ventricular muscles of nonfailing and failing human hearts. We acquired freshly explanted nonfailing (n = 9) and failing (n = 10) human hearts. All experiments were performed on intact right ventricular cardiac trabeculae (n = 40) at physiological temperature and near the normal heart rate range. The failing myocardium showed the typical heart failure phenotype: a negative force-frequency relationship and β-adrenergic desensitization (P < 0.05), indicating the expected pathological myocardium in the right ventricles. We found that there exists a length-dependent regulation of cross-bridge cycling kinetics in human myocardium. Decreasing muscle length accelerated the rate of cross-bridge reattachment (ktr) in both nonfailing and failing myocardium (P < 0.05) equally; there were no major differences between nonfailing and failing myocardium at each respective length (P > 0.05), indicating that this regulatory mechanism is preserved in heart failure. Length-dependent assessment of twitch kinetics mirrored these findings; normalized dF/dt slowed down with increasing length of the muscle and was virtually identical in diseased tissue. This study shows for the first time that muscle length regulates cross-bridge kinetics in human myocardium under near-physiological conditions and that those kinetics are preserved in the right ventricular tissues of heart failure patients. Copyright © 2015 the American Physiological Society.

Force generation and wing deformation characteristics of a flapping-wing micro air vehicle 'DelFly II' in hovering flight.

PubMed

Percin, M; van Oudheusden, B W; de Croon, G C H E; Remes, B

2016-05-19

The study investigates the aerodynamic performance and the relation between wing deformation and unsteady force generation of a flapping-wing micro air vehicle in hovering flight configuration. Different experiments were performed where fluid forces were acquired with a force sensor, while the three-dimensional wing deformation was measured with a stereo-vision system. In these measurements, time-resolved power consumption and flapping-wing kinematics were also obtained under both in-air and in-vacuum conditions. Comparison of the results for different flapping frequencies reveals different wing kinematics and deformation characteristics. The high flapping frequency case produces higher forces throughout the complete flapping cycle. Moreover, a phase difference occurs in the variation of the forces, such that the low flapping frequency case precedes the high frequency case. A similar phase lag is observed in the temporal evolution of the wing deformation characteristics, suggesting that there is a direct link between the two phenomena. A considerable camber formation occurs during stroke reversals, which is mainly determined by the stiffener orientation. The wing with the thinner surface membrane displays very similar characteristics to the baseline wing, which implies the dominance of the stiffeners in terms of providing rigidity to the wing. Wing span has a significant effect on the aerodynamic efficiency such that increasing the span length by 4 cm results in a 6% enhancement in the cycle-averaged X-force to power consumption ratio compared to the standard DelFly II wings with a span length of 28 cm.

Cellular basis of neuroepithelial bending during mouse spinal neural tube closure

PubMed Central

McShane, Suzanne G.; Molè, Matteo A.; Savery, Dawn; Greene, Nicholas D. E; Tam, Patrick P.L.; Copp, Andrew J.

2015-01-01

Summary Bending of the neural plate at paired dorsolateral hinge points (DLHPs) is required for neural tube closure in the spinal region of the mouse embryo. As a step towards understanding the morphogenetic mechanism of DLHP development, we examined variations in neural plate cellular architecture and proliferation during closure. Neuroepithelial cells within the median hinge point (MHP) contain nuclei that are mainly basally located and undergo relatively slow proliferation, with a 7 h cell cycle length. In contrast, cells in the dorsolateral neuroepithelium, including the DLHP, exhibit nuclei distributed throughout the apico-basal axis and undergo rapid proliferation, with a 4 h cell cycle length. As the neural folds elevate, cell numbers increase to a greater extent in the dorsolateral neural plate that contacts the surface ectoderm, compared with the more ventromedial neural plate where cells contact paraxial mesoderm and notochord. This marked increase in dorsolateral cell number cannot be accounted for solely on the basis of enhanced cell proliferation in this region. We hypothesised that neuroepithelial cells may translocate in a ventral-to-dorsal direction as DLHP formation occurs, and this was confirmed by vital cell labelling in cultured embryos. The translocation of cells into the neural fold, together with its more rapid cell proliferation, leads to an increase in cell density dorsolaterally compared with the more ventromedial neural plate. These findings suggest a model in which DLHP formation may proceed through ‘buckling’ of the neuroepithelium at a dorso-ventral boundary marked by a change in cell-packing density. PMID:26079577

Lyme disease and relapsing fever Borrelia elongate through zones of peptidoglycan synthesis that mark division sites of daughter cells.

PubMed

Jutras, Brandon Lyon; Scott, Molly; Parry, Bradley; Biboy, Jacob; Gray, Joe; Vollmer, Waldemar; Jacobs-Wagner, Christine

2016-08-16

Agents that cause Lyme disease, relapsing fever, leptospirosis, and syphilis belong to the phylum Spirochaetae-a unique lineage of bacteria most known for their long, spiral morphology. Despite the relevance to human health, little is known about the most fundamental aspects of spirochete growth. Here, using quantitative microscopy to track peptidoglycan cell-wall synthesis, we found that the Lyme disease spirochete Borrelia burgdorferi displays a complex pattern of growth. B. burgdorferi elongates from discrete zones that are both spatially and temporally regulated. In addition, some peptidoglycan incorporation occurs along the cell body, with the notable exception of a large region at the poles. Newborn cells inherit a highly active zone of peptidoglycan synthesis at midcell that contributes to elongation for most of the cell cycle. Concomitant with the initiation of nucleoid separation and cell constriction, second and third zones of elongation are established at the 1/4 and 3/4 cellular positions, marking future sites of division for the subsequent generation. Positioning of elongation zones along the cell is robust to cell length variations and is relatively precise over long distances (>30 µm), suggesting that cells ‟sense" relative, as opposed to absolute, cell length to establish zones of peptidoglycan synthesis. The transition from one to three zones of peptidoglycan growth during the cell cycle is also observed in relapsing fever Borrelia. However, this mode of growth does not extend to representative species from other spirochetal genera, suggesting that this distinctive growth mode represents an evolutionary divide in the spirochete phylum.

A Bayesian Joint Model of Menstrual Cycle Length and Fecundity

PubMed Central

Lum, Kirsten J.; Sundaram, Rajeshwari; Louis, Germaine M. Buck; Louis, Thomas A.

2015-01-01

Summary Menstrual cycle length (MCL) has been shown to play an important role in couple fecundity, which is the biologic capacity for reproduction irrespective of pregnancy intentions. However, a comprehensive assessment of its role requires a fecundity model that accounts for male and female attributes and the couple’s intercourse pattern relative to the ovulation day. To this end, we employ a Bayesian joint model for MCL and pregnancy. MCLs follow a scale multiplied (accelerated) mixture model with Gaussian and Gumbel components; the pregnancy model includes MCL as a covariate and computes the cycle-specific probability of pregnancy in a menstrual cycle conditional on the pattern of intercourse and no previous fertilization. Day-specific fertilization probability is modeled using natural, cubic splines. We analyze data from the Longitudinal Investigation of Fertility and the Environment Study (the LIFE Study), a couple based prospective pregnancy study, and find a statistically significant quadratic relation between fecundity and menstrual cycle length, after adjustment for intercourse pattern and other attributes, including male semen quality, both partner’s age, and active smoking status (determined by baseline cotinine level 100ng/mL). We compare results to those produced by a more basic model and show the advantages of a more comprehensive approach. PMID:26295923

Analysis of growth of tetraploid nuclei in roots of Vicia faba.

PubMed

Bansal, J; Davidson, D

1978-03-01

Growth of nuclei of a marked population of cells was determined from G1 to prophase in roots of Vicia faba. The cells were marked by inducing them to become tetraploid by treatment with 0.002% colchicine for 1 hr. Variation in nuclear volume is large; it is established in early G1 and maintained through interphase and into prophase. One consequence of this variation is that there is considerable overlap between volumes of nuclei of different ages in the cell cycle; nuclear volume, we suggest, cannot be used as an accurate indicator of the age of the cell in its growth cycle. Nuclei exhibit considerable variation in their growth rate through the cell cycle. Of the marked population of cells, about 65% had completed a cell cycle 14--15 hr after they were formed. These tetraploid nuclei have a cell cycle duration similar to that of fast cycling diploid cells of the same roots. Since they do complete a cell cycle, at least 65% of the nuclei studied must come from rapidly proliferating cells, showing that variability in nuclear volumes must be present in growing cells and cannot be attributed solely to the presence, in our samples, of non-cycling cells.

Optimizing local capture of atrial fibrillation by rapid pacing: study of the influence of tissue dynamics.

PubMed

Uldry, Laurent; Virag, Nathalie; Jacquemet, Vincent; Vesin, Jean-Marc; Kappenberger, Lukas

2010-12-01

While successful termination by pacing of organized atrial tachycardias has been observed in patients, rapid pacing of AF can induce a local capture of the atrial tissue but in general no termination. The purpose of this study was to perform a systematic evaluation of the ability to capture AF by rapid pacing in a biophysical model of the atria with different dynamics in terms of conduction velocity (CV) and action potential duration (APD). Rapid pacing was applied during 30 s at five locations on the atria, for pacing cycle lengths in the range 60-110% of the mean AF cycle length (AFCL(mean)). Local AF capture could be achieved using rapid pacing at pacing sites located distal to major anatomical obstacles. Optimal pacing cycle lengths were found in the range 74-80% AFCL(mean) (capture window width: 14.6 ± 3% AFCL(mean)). An increase/decrease in CV or APD led to a significant shrinking/stretching of the capture window. Capture did not depend on AFCL, but did depend on the atrial substrate as characterized by an estimate of its wavelength, a better capture being achieved at shorter wavelengths. This model-based study suggests that a proper selection of the pacing site and cycle length can influence local capture results and that atrial tissue properties (CV and APD) are determinants of the response to rapid pacing.

Effect of cycle time on polyhydroxybutyrate (PHB) production in aerobic mixed cultures.

PubMed

Ozdemir, Sebnem; Akman, Dilek; Cirik, Kevser; Cinar, Ozer

2014-03-01

The aim of this study was to investigate the effect of cycle time on polyhydroxybutyrate (PHB) production under aerobic dynamic feeding system. The acetate-fed feast and famine sequencing batch reactor was used to enrich PHB accumulating microorganism. Sequencing batch reactor (SBR) was operated in four different cycle times (12, 8, 4, and 2 h) fed with a synthetic wastewater. The system performance was determined by monitoring total dissolved organic carbon, dissolved oxygen, oxidation-reduction potential, and PHB concentration. In this study, under steady-state conditions, the feast period of the SBR was found to allow the PHB storage while a certain part of stored PHB was used for continued growth in famine period. The percentage PHB storages by aerobic microorganism were at 16, 18, 42, and 55% for the 12, 8, 4, and 2-h cycle times, respectively. The PHB storage was increased as the length of the cycle time was decreased, and the ratio of the feast compared to the total cycle length was increased from around 13 to 33% for the 12 and 2-h cycle times, respectively.

Off-diagonal long-range order, cycle probabilities, and condensate fraction in the ideal Bose gas.

PubMed

Chevallier, Maguelonne; Krauth, Werner

2007-11-01

We discuss the relationship between the cycle probabilities in the path-integral representation of the ideal Bose gas, off-diagonal long-range order, and Bose-Einstein condensation. Starting from the Landsberg recursion relation for the canonic partition function, we use elementary considerations to show that in a box of size L3 the sum of the cycle probabilities of length k>L2 equals the off-diagonal long-range order parameter in the thermodynamic limit. For arbitrary systems of ideal bosons, the integer derivative of the cycle probabilities is related to the probability of condensing k bosons. We use this relation to derive the precise form of the pik in the thermodynamic limit. We also determine the function pik for arbitrary systems. Furthermore, we use the cycle probabilities to compute the probability distribution of the maximum-length cycles both at T=0, where the ideal Bose gas reduces to the study of random permutations, and at finite temperature. We close with comments on the cycle probabilities in interacting Bose gases.

Achromatic recirculated chicane with fixed geometry and independently variable path length and momentum compaction

DOEpatents

Douglas, David R.; Neil, George R.

2005-04-26

A particle beam recirculated chicane geometry that, through the inducement of a pair of 180 degree bends directed by the poles of a pair of controllable magnetic fields allows for variation of dipole position, return loop radii and steering/focussing, thereby allowing the implementation of independent variation of path length and momentum compaction.

Phenotypic Variation in Specific Gravity and Fiber Length of Cherrybark Oak

Treesearch

R. E. Farmer

1969-01-01

Knowledge of variation in oakwood properties that are related to pulp yield and quality is essential in genetic improvement research. Two important properties that can be studied easily are specific gravity and fiber length. This paper reports a study made to develop a guide to field selection of breeding material in cherrybark oak (Quercus falcala...

Biennial-Aligned Lunisolar-Forcing of ENSO: Implications for Simplified Climate Models

NASA Astrophysics Data System (ADS)

Pukite, P. R.

2017-12-01

By solving Laplace's tidal equations along the equatorial Pacific thermocline, assuming a delayed-differential effective gravity forcing due to a combined lunar+solar (lunisolar) stimulus, we are able to precisely match ENSO periodic variations over wide intervals. The underlying pattern is difficult to decode by conventional means such as spectral analysis, which is why it has remained hidden for so long, despite the excellent agreement in the time-domain. What occurs is that a non-linear seasonal modulation with monthly and fortnightly lunar impulses along with a biennially-aligned "see-saw" is enough to cause a physical aliasing and thus multiple folding in the frequency spectrum. So, instead of a conventional spectral tidal decomposition, we opted for a time-domain cross-validating approach to calibrate the amplitude and phasing of the lunisolar cycles. As the lunar forcing consists of three fundamental periods (draconic, anomalistic, synodic), we used the measured Earth's length-of-day (LOD) decomposed and resolved at a monthly time-scale [1] to align the amplitude and phase precisely. Even slight variations from the known values of the long-period tides will degrade the fit, so a high-resolution calibration is possible. Moreover, a narrow training segment from 1880-1920 using NINO34/SOI data is adequate to extrapolate the cycles of the past 100 years (see attached figure). To further understand the biennial impact of a yearly differential-delay, we were able to also decompose using difference equations the historical sea-level-height readings at Sydney harbor to clearly expose the ENSO behavior. Finally, the ENSO lunisolar model was validated by back-extrapolating to Unified ENSO coral proxy (UEP) records dating to 1650. The quasi-biennial oscillation (QBO) behavior of equatorial stratospheric winds derives following a similar pattern to ENSO via the tidal equations, but with an emphasis on draconic forcing. This improvement in ENSO and QBO understanding has implications for vastly simplifying global climate models due to the straightforward application of a well-known and well-calibrated forcing. [1] Na, Sung-Ho, et al. "Characteristics of Perturbations in Recent Length of Day and Polar Motion." Journal of Astronomy and Space Sciences 30 (2013): 33-41.

Research regarding the influence of driving-wires length change on positioning precision of a robotic arm

NASA Astrophysics Data System (ADS)

Ciofu, C.; Stan, G.

2016-08-01

The paper emphasise positioning precision of an elephant's trunk robotic arm which has joints driven by wires with variable length while operating The considered 5 degrees of freedom robotic arm has a particular structure of joint that makes possible inner actuation with wire-driven mechanism. We analyse solely the length change of wires as a consequence due inner winding and unwinding on joints for certain values of rotational angles. Variations in wires length entail joint angular displacements. We analyse positioning precision by taking into consideration equations from inverse kinematics of the elephant's trunk robotic arm. The angular displacements of joints are considered into computational method after partial derivation of positioning equations. We obtain variations of wires length at about tenths of micrometers. These variations employ angular displacements which are about minutes of sexagesimal degree and, thus, define positioning precision of elephant's trunk robotic arms. The analytical method is used for determining aftermath design structure of an elephant's trunk robotic arm with inner actuation through wires on positioning precision. Thus, designers could take suitable decisions on accuracy specifications limits of the robotic arm.

Temporal and Periodic Variations of Sunspot Counts in Flaring and Non-Flaring Active Regions

NASA Astrophysics Data System (ADS)

Kilcik, A.; Yurchyshyn, V.; Donmez, B.; Obridko, V. N.; Ozguc, A.; Rozelot, J. P.

2018-04-01

We analyzed temporal and periodic variations of sunspot counts (SSCs) in flaring (C-, M-, or X-class flares), and non-flaring active regions (ARs) for nearly three solar cycles (1986 through 2016). Our main findings are as follows: i) temporal variations of monthly means of the daily total SSCs in flaring and non-flaring ARs behave differently during a solar cycle and the behavior varies from one cycle to another; during Solar Cycle 23 temporal SSC profiles of non-flaring ARs are wider than those of flaring ARs, while they are almost the same during Solar Cycle 22 and the current Cycle 24. The SSC profiles show a multi-peak structure and the second peak of flaring ARs dominates the current Cycle 24, while the difference between peaks is less pronounced during Solar Cycles 22 and 23. The first and second SSC peaks of non-flaring ARs have comparable magnitude in the current solar cycle, while the first peak is nearly absent in the case of the flaring ARs of the same cycle. ii) Periodic variations observed in the SSCs profiles of flaring and non-flaring ARs derived from the multi-taper method (MTM) spectrum and wavelet scalograms are quite different as well, and they vary from one solar cycle to another. The largest detected period in flaring ARs is 113± 1.6 days while we detected much longer periodicities (327± 13, 312 ± 11, and 256± 8 days) in the non-flaring AR profiles. No meaningful periodicities were detected in the MTM spectrum of flaring ARs exceeding 55± 0.7 days during Solar Cycles 22 and 24, while a 113± 1.3 days period was detected in flaring ARs of Solar Cycle 23. For the non-flaring ARs the largest detected period was only 31± 0.2 days for Cycle 22 and 72± 1.3 days for the current Cycle 24, while the largest measured period was 327± 13 days during Solar Cycle 23.

Seasonal Variation of High-latitude Geomagnetic Activity Revisited

NASA Astrophysics Data System (ADS)

Tanskanen, E.; Hynönen, R.; Mursula, K.

2017-12-01

The coupling of the solar wind and auroral region has been examined by using westward electrojet indices since 1966 - 2014. We have studied the seasonal variation of high-latitude geomagnetic activity in individual years for solar cycles 20 - 24. The classical two-equinox activity pattern in geomagnetic activity was seen in multi-year averages but it was found in less than one third of the years examined. We found that the seasonal variation of high-latitude geomagnetic activity closely follows the solar wind speed. While the mechanisms leading to the two-equinox maxima pattern are in operation, the long-term change of solar wind speed tends to mask the effect of these mechanisms for individual years. We identified the most active and the second most active season based on westward electrojet indices AL (1966 - 2014) and IL (1995 - 2014). The annual maximum is found at either equinox in 2/3 and at either solstice in 1/3 of the years examined. Large cycle-to-cycle variation is found in the seasonal pattern: equinox maxima are more common during cycles 21 and 22 than in cycles 23 or 24. An exceptionally long winter dominance in high-latitude activity and solar wind speed is seen in the declining phase of cycle 23, after the appearance of the long-lasting low-latitude coronal hole.

Sex-ratio, seasonality and long-term variation in maturation and spawning of the brown shrimp Crangon crangon (L.) in the German Bight (North Sea)

NASA Astrophysics Data System (ADS)

Siegel, V.; Damm, U.; Neudecker, T.

2008-12-01

Aspects of the reproductive and maturation biology of the brown shrimp Crangon crangon (L.) were studied in various subareas of the German Bight (North Sea). The size-specific sex ratio of C. crangon was examined based on length frequency distribution data. The sex ratio for the smallest size groups at which sex was determined was typically around 0.5, indicating an even ratio between males and females. The proportion of females decreased in the 30-45 mm size range. In length classes larger than 50 mm, the proportion of females constantly increases to 100% at around 60 mm total length. We concluded that sex reversal from male to female may not occur in C. crangon. Size at sexual maturity was determined from the proportion of ovigerous females. Size at maturity ( L 50) was estimated as 55.4 and 62.0 mm total length for spring and winter data, respectively. The seasonal spawning cycle was studied over the period 1958-2005. Between mid February and late June and for size classes larger than 65 mm ovigerous shrimps exceeded 80% and reached up to 100% of the females in the population. This period can be seen as the core spawning season. From early August to early December the proportion of ovigerous shrimps in the female population is very low. Interannual differences in the seasonal process are obvious with a dramatic decline in C. crangon reproductive success in the late 1980s. Various options are discussed for the reasons of the decline and recovery of the reproductive performance.

Diversity, composition, and geographical distribution of microbial communities in California salt marsh sediments

USGS Publications Warehouse

Cordova-Kreylos, A. L.; Cao, Y.; Green, P.G.; Hwang, H.-M.; Kuivila, K.M.; LaMontagne, M.G.; Van De Werfhorst, L. C.; Holden, P.A.; Scow, K.M.

2006-01-01

The Pacific Estuarine Ecosystem Indicators Research Consortium seeks to develop bioindicators of toxicant-induced stress and bioavailability for wetland biota. Within this framework, the effects of environmental and pollutant variables on microbial communities were studied at different spatial scales over a 2-year period. Six salt marshes along the California coastline were characterized using phospholipid fatty acid (PLFA) analysis and terminal restriction fragment length polymorphism (TRFLP) analysis. Additionally, 27 metals, six currently used pesticides, total polychlorinated biphenyls and polycyclic aromatic hydrocarbons, chlordanes, nonachlors, dichlorodiphenyldichloroethane, and dichlorodiphenyldichloroethylene were analyzed. Sampling was performed over large (between salt marshes), medium (stations within a marsh), and small (different channel depths) spatial scales. Regression and ordination analysis suggested that the spatial variation in microbial communities exceeded the variation attributable to pollutants. PLFA analysis and TRFLP canonical correspondence analysis (CCA) explained 74 and 43% of the variation, respectively, and both methods attributed 34% of the variation to tidal cycles, marsh, year, and latitude. After accounting for spatial variation using partial CCA, we found that metals had a greater effect on microbial community composition than organic pollutants had. Organic carbon and nitrogen contents were positively correlated with PLFA biomass, whereas total metal concentrations were positively correlated with biomass and diversity. Higher concentrations of heavy metals were negatively correlated with branched PLFAs and positively correlated with methyl- and cyclo-substituted PLFAs. The strong relationships observed between pollutant concentrations and some of the microbial indicators indicated the potential for using microbial community analyses in assessments of the ecosystem health of salt marshes. Copyright ?? 2006, American Society for Microbiology. All Rights Reserved.

Diversity, Composition, and Geographical Distribution of Microbial Communities in California Salt Marsh Sediments

PubMed Central

Córdova-Kreylos, Ana Lucía; Cao, Yiping; Green, Peter G.; Hwang, Hyun-Min; Kuivila, Kathryn M.; LaMontagne, Michael G.; Van De Werfhorst, Laurie C.; Holden, Patricia A.; Scow, Kate M.

2006-01-01

The Pacific Estuarine Ecosystem Indicators Research Consortium seeks to develop bioindicators of toxicant-induced stress and bioavailability for wetland biota. Within this framework, the effects of environmental and pollutant variables on microbial communities were studied at different spatial scales over a 2-year period. Six salt marshes along the California coastline were characterized using phospholipid fatty acid (PLFA) analysis and terminal restriction fragment length polymorphism (TRFLP) analysis. Additionally, 27 metals, six currently used pesticides, total polychlorinated biphenyls and polycyclic aromatic hydrocarbons, chlordanes, nonachlors, dichlorodiphenyldichloroethane, and dichlorodiphenyldichloroethylene were analyzed. Sampling was performed over large (between salt marshes), medium (stations within a marsh), and small (different channel depths) spatial scales. Regression and ordination analysis suggested that the spatial variation in microbial communities exceeded the variation attributable to pollutants. PLFA analysis and TRFLP canonical correspondence analysis (CCA) explained 74 and 43% of the variation, respectively, and both methods attributed 34% of the variation to tidal cycles, marsh, year, and latitude. After accounting for spatial variation using partial CCA, we found that metals had a greater effect on microbial community composition than organic pollutants had. Organic carbon and nitrogen contents were positively correlated with PLFA biomass, whereas total metal concentrations were positively correlated with biomass and diversity. Higher concentrations of heavy metals were negatively correlated with branched PLFAs and positively correlated with methyl- and cyclo-substituted PLFAs. The strong relationships observed between pollutant concentrations and some of the microbial indicators indicated the potential for using microbial community analyses in assessments of the ecosystem health of salt marshes. PMID:16672478

Modelling health and output at business cycle horizons for the USA.

PubMed

Narayan, Paresh Kumar

2010-07-01

In this paper we employ a theoretical framework - a simple macro model augmented with health - that draws guidance from the Keynesian view of business cycles to examine the relative importance of permanent and transitory shocks in explaining variations in health expenditure and output at business cycle horizons for the USA. The variance decomposition analysis of shocks reveals that at business cycle horizons permanent shocks explain the bulk of the variations in output, while transitory shocks explain the bulk of the variations in health expenditures. We undertake a shock decomposition analysis for private health expenditures versus public health expenditures and interestingly find that while transitory shocks are more important for private sector expenditures, permanent shocks dominate public health expenditures. Copyright (c) 2009 John Wiley & Sons, Ltd.

Reproducibility of telomere length assessment: an international collaborative study.

PubMed

Martin-Ruiz, Carmen M; Baird, Duncan; Roger, Laureline; Boukamp, Petra; Krunic, Damir; Cawthon, Richard; Dokter, Martin M; van der Harst, Pim; Bekaert, Sofie; de Meyer, Tim; Roos, Goran; Svenson, Ulrika; Codd, Veryan; Samani, Nilesh J; McGlynn, Liane; Shiels, Paul G; Pooley, Karen A; Dunning, Alison M; Cooper, Rachel; Wong, Andrew; Kingston, Andrew; von Zglinicki, Thomas

2015-10-01

Telomere length is a putative biomarker of ageing, morbidity and mortality. Its application is hampered by lack of widely applicable reference ranges and uncertainty regarding the present limits of measurement reproducibility within and between laboratories. We instigated an international collaborative study of telomere length assessment: 10 different laboratories, employing 3 different techniques [Southern blotting, single telomere length analysis (STELA) and real-time quantitative PCR (qPCR)] performed two rounds of fully blinded measurements on 10 human DNA samples per round to enable unbiased assessment of intra- and inter-batch variation between laboratories and techniques. Absolute results from different laboratories differed widely and could thus not be compared directly, but rankings of relative telomere lengths were highly correlated (correlation coefficients of 0.63-0.99). Intra-technique correlations were similar for Southern blotting and qPCR and were stronger than inter-technique ones. However, inter-laboratory coefficients of variation (CVs) averaged about 10% for Southern blotting and STELA and more than 20% for qPCR. This difference was compensated for by a higher dynamic range for the qPCR method as shown by equal variance after z-scoring. Technical variation per laboratory, measured as median of intra- and inter-batch CVs, ranged from 1.4% to 9.5%, with differences between laboratories only marginally significant (P = 0.06). Gel-based and PCR-based techniques were not different in accuracy. Intra- and inter-laboratory technical variation severely limits the usefulness of data pooling and excludes sharing of reference ranges between laboratories. We propose to establish a common set of physical telomere length standards to improve comparability of telomere length estimates between laboratories. © The Author 2014. Published by Oxford University Press on behalf of the International Epidemiological Association.

Study on length distribution of ramie fibers

USDA-ARS?s Scientific Manuscript database

The extra-long length of ramie fibers and the high variation in fiber length has a negative impact on the spinning processes. In order to better study the feature of ramie fiber length, in this research, the probability density function of the mixture model applied in the characterization of cotton...

Relative gut lengths of coral reef butterflyfishes (Pisces: Chaetodontidae)

NASA Astrophysics Data System (ADS)

Berumen, M. L.; Pratchett, M. S.; Goodman, B. A.

2011-12-01

Variation in gut length of closely related animals is known to generally be a good predictor of dietary habits. We examined gut length in 28 species of butterflyfishes (Chaetodontidae), which encompass a wide range of dietary types (planktivores, omnivores, and corallivores). We found general dietary patterns to be a good predictor of relative gut length, although we found high variation among groups and covariance with body size. The longest gut lengths are found in species that exclusively feed on the living tissue of corals, while the shortest gut length is found in a planktivorous species. Although we tried to control for phylogeny, corallivory has arisen multiple times in this family, confounding our analyses. The butterflyfishes, a speciose family with a wide range of dietary habits, may nonetheless provide an ideal system for future work studying gut physiology associated with specialization and foraging behaviors.

Rapid cycling genomic selection in a multiparental tropical maize population

USDA-ARS?s Scientific Manuscript database

Genomic selection (GS) increases genetic gain by reducing the length of the selection cycle, as has been exemplified in maize using rapid cycling recombination of biparental populations. However, no results of GS applied to maize multi-parental populations have been reported so far. This study is th...

In Vitro Quantification of Gutter Formation and Chimney Graft Compression in Chimney EVAR Stent-Graft Configurations Using Electrocardiography-Gated Computed Tomography.

PubMed

Overeem, Simon P; Donselaar, Esmé J; Boersen, Jorrit T; Groot Jebbink, Erik; Slump, Cornelis H; de Vries, Jean-Paul P M; Reijnen, Michel M P J

2018-03-01

To assess the dynamic behavior of chimney grafts during the cardiac cycle. Three chimney endovascular aneurysm repair (EVAR) stent-graft configurations (Endurant and Advanta V12, Endurant and Viabahn, and Endurant and BeGraft) were placed in silicone aneurysm models and subjected to physiologic flow. Electrocardiography (ECG)-gated contrast-enhanced computed tomography was used to visualize geometric changes during the cardiac cycle. Endograft and chimney graft surface, gutter volume, chimney graft angulation over the center lumen line, and the D-ratio (the ratio between the lengths of the major and minor axes) were independently assessed by 2 observers at 10 time points in the cardiac cycle. Both gutter volumes and chimney graft geometry changed significantly during the cardiac cycle in all 3 configurations (p<0.001). Gutters and endoleaks were observed in all configurations. The largest gutter volume (232.8 mm 3 ) and change in volume (20.7 mm 3 ) between systole and diastole were observed in the Endurant-Advanta configuration. These values were 2.7- and 3.0-fold higher, respectively, compared to the Endurant-Viabahn configuration and 1.7- and 1.6-fold higher as observed in the Endurant-BeGraft configuration. The Endurant-Viabahn configuration had the highest D-ratio (right, 1.26-1.35; left, 1.33-1.48), while the Endurant-BeGraft configuration had the lowest (right, 1.11-1.17; left, 1.08-1.15). Assessment of the interobserver variability showed a high correlation (intraclass correlation >0.935) between measurements. Gutter volumes and stent compression are dynamic phenomena that reshape during the cardiac cycle. Compelling differences were observed during the cardiac cycle in all configurations, with the self-expanding (Endurant-Viabahn) chimney EVAR configurations having smaller gutters and less variation in gutter volume during the cardiac cycle yet more stent compression without affecting the chimney graft surface.

Estrus behavior, ovarian dynamics, and progesterone secretion in Criollo cattle during estrous cycles with two and three follicular waves.

PubMed

Quezada-Casasola, Andrés; Avendaño-Reyes, Leonel; Macías-Cruz, Ulises; Ramírez-Godínez, José Alejandro; Correa-Calderón, Abelardo

2014-04-01

In beef and dairy cattle, the number of follicular waves affects endocrine, ovarian, and behavioral events during a normal estrous cycle. However, in Mexican-native Criollo cattle, a shortly and recently domesticated breed, the association between wave patterns and follicular development has not been studied. The objective of this study was to evaluate the effect of number of follicular waves in an estrous cycle on development of anovulatory and ovulatory follicles, corpus luteum (CL) development and functionality, as well as estrual behavior in Criollo cows. Ovarian follicular activities of 22 cycling multiparous Criollo cows were recorded daily by transrectal ultrasound examinations during a complete estrous cycle. Additionally, blood samples were collected daily to determine serum progesterone concentrations. Only two- (n = 17, 77.3%) and three-wave follicular (n = 5, 22.7%) patterns were observed. Duration of estrus, length of estrous cycle, and length of follicular and luteal phases were similar (P > 0.05) between cycles of two and three waves. Two-wave cows ovulated earlier (P < 0.05) after detection of estrus than three-wave cows. Detected day and maximum diameter of first anovulatory follicle were not affected (P > 0.05) by number of waves. Growth rate of first dominant follicle was higher (P < 0.05) in three-wave cycles. Onset of regression of the first dominant follicle was earlier (P < 0.01) in cycles with three waves than in those with two waves. In two-wave cycles, ovulatory follicles were detected earlier (P < 0.01) and had lower (P < 0.01) growth rate than in three-wave cycles. Development (i.e., maximum diameter and volume) and functionality (minimum and maximum progesterone concentration) of CL were similar (P > 0.05) between two- and three-wave patterns. In conclusion, Criollo cows have two or three follicular waves per estrous cycle, which alters partially ovulatory follicle development and ovulation time after detection of estrus. Length of estrous cycle, as well as CL development and functionality, was not affected by number of follicular waves.

Late Quaternary glacier sensitivity to temperature and precipitation distribution in the Southern Alps of New Zealand

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ann V. Rowan; Simon H. Brocklehurst; David M. Schultz

2014-05-01

Glaciers respond to climate variations and leave geomorphic evidence that represents an important terrestrial paleoclimate record. However, the accuracy of paleoclimate reconstructions from glacial geology is limited by the challenge of representing mountain meteorology in numerical models. Precipitation is usually treated in a simple manner and yet represents difficult-to-characterize variables such as amount, distribution, and phase. Furthermore, precipitation distributions during a glacial probably differed from present-day interglacial patterns. We applied two models to investigate glacier sensitivity to temperature and precipitation in the eastern Southern Alps of New Zealand. A 2-D model was used to quantify variations in the length ofmore » the reconstructed glaciers resulting from plausible precipitation distributions compared to variations in length resulting from change in mean annual air temperature and precipitation amount. A 1-D model was used to quantify variations in length resulting from interannual climate variability. Assuming that present-day interglacial values represent precipitation distributions during the last glacial, a range of plausible present-day precipitation distributions resulted in uncertainty in the Last Glacial Maximum length of the Pukaki Glacier of 17.1?km (24%) and the Rakaia Glacier of 9.3?km (25%), corresponding to a 0.5°C difference in temperature. Smaller changes in glacier length resulted from a 50% decrease in precipitation amount from present-day values (-14% and -18%) and from a 50% increase in precipitation amount (5% and 9%). Our results demonstrate that precipitation distribution can produce considerable variation in simulated glacier extents and that reconstructions of paleoglaciers should include this uncertainty.« less

Negative correlation between rates of molecular evolution and flowering cycles in temperate woody bamboos revealed by plastid phylogenomics.

PubMed

Ma, Peng-Fei; Vorontsova, Maria S; Nanjarisoa, Olinirina Prisca; Razanatsoa, Jacqueline; Guo, Zhen-Hua; Haevermans, Thomas; Li, De-Zhu

2017-12-21

Heterogeneous rates of molecular evolution are universal across the tree of life, posing challenges for phylogenetic inference. The temperate woody bamboos (tribe Arundinarieae, Poaceae) are noted for their extremely slow molecular evolutionary rates, supposedly caused by their mysterious monocarpic reproduction. However, the correlation between substitution rates and flowering cycles has not been formally tested. Here we present 15 newly sequenced plastid genomes of temperate woody bamboos, including the first genomes ever sequenced from Madagascar representatives. A data matrix of 46 plastid genomes representing all 12 lineages of Arundinarieae was assembled for phylogenetic and molecular evolutionary analyses. We conducted phylogenetic analyses using different sequences (e.g., coding and noncoding) combined with different data partitioning schemes, revealing conflicting relationships involving internodes among several lineages. A great difference in branch lengths were observed among the major lineages, and topological inconsistency could be attributed to long-branch attraction (LBA). Using clock model-fitting by maximum likelihood and Bayesian approaches, we furthermore demonstrated extensive rate variation among these major lineages. Rate accelerations mainly occurred for the isolated lineages with limited species diversification, totaling 11 rate shifts during the tribe's evolution. Using linear regression analysis, we found a negative correlation between rates of molecular evolution and flowering cycles for Arundinarieae, notwithstanding that the correlation maybe insignificant when taking the phylogenetic structure into account. Using the temperate woody bamboos as an example, we found further evidence that rate heterogeneity is universal in plants, suggesting that this will pose a challenge for phylogenetic reconstruction of bamboos. The bamboos with longer flowering cycles tend to evolve more slowly than those with shorter flowering cycles, in accordance with a putative generation time effect.

STELLAR MAGNETIC CYCLES IN THE SOLAR-LIKE STARS KEPLER-17 AND KEPLER-63

DOE Office of Scientific and Technical Information (OSTI.GOV)

Estrela, Raissa; Valio, Adriana, E-mail: rlf.estrela@gmail.com, E-mail: avalio@craam.mackenzie.br

2016-11-01

The stellar magnetic field plays a crucial role in the star internal mechanisms, as in the interactions with its environment. The study of starspots provides information about the stellar magnetic field and can characterize the cycle. Moreover, the analysis of solar-type stars is also useful to shed light onto the origin of the solar magnetic field. The objective of this work is to characterize the magnetic activity of stars. Here, we studied two solar-type stars, Kepler-17 and Kepler-63, using two methods to estimate the magnetic cycle length. The first one characterizes the spots (radius, intensity, and location) by fitting themore » small variations in the light curve of a star caused by the occultation of a spot during a planetary transit. This approach yields the number of spots present in the stellar surface and the flux deficit subtracted from the star by their presence during each transit. The second method estimates the activity from the excess in the residuals of the transit light curves. This excess is obtained by subtracting a spotless model transit from the light curve and then integrating all the residuals during the transit. The presence of long-term periodicity is estimated in both time series. With the first method, we obtained P {sub cycle} = 1.12 ± 0.16 year (Kepler-17) and P {sub cycle} = 1.27 ± 0.16 year (Kepler-63), and for the second approach the values are 1.35 ± 0.27 year and 1.27 ± 0.12 year, respectively. The results of both methods agree with each other and confirm their robustness.« less

Role of asymmetric meridional circulation in producing north-south asymmetry in a solar cycle dynamo model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Belucz, Bernadett; Dikpati, Mausumi

2013-12-10

Solar cycles in the north and south hemispheres differ in cycle length, amplitude, profile, polar fields, and coronal structure. To show what role differences in meridional flow could play in producing these differences, we present the results of three sets of numerical simulations from a flux transport dynamo in which one property of meridional circulation has been changed in the south only. The changes are in amplitude and the presence of a second cell in latitude or in depth. An ascending phase speedup causes weakening of polar and toroidal fields; a speed decrease in a late descending phase does notmore » change amplitudes. A long-duration speed increase leads to lower toroidal field peaks but unchanged polar field peaks. A second high-latitude circulation cell in an ascending phase weakens the next polar and toroidal field peaks, and the ascending phase is lengthened. A second cell in a late descending phase speeds up the cycle. A long-duration second cell leads to a poleward branch of the butterfly diagram and weaker polar fields. A second cell in depth reverses the tilt of the butterfly wing, decreasing polar fields when added during an ascending phase and increasing them during a late descending phase. A long-duration presence of a second cell in radius evolves the butterfly diagram far away from the observed one, with different dynamo periods in low and high latitudes. Thus, a second cell in depth is unlikely to persist more than a few years if the solar dynamo is advection-dominated. Our results show the importance of time variation and north-south asymmetry in meridional circulation in producing differing cycles in the north and south.« less

Spatial variation in pollinator-mediated selection on phenology, floral display and spur length in the orchid Gymnadenia conopsea.

PubMed

Chapurlat, Elodie; Ågren, Jon; Sletvold, Nina

2015-12-01

Spatial variation in plant-pollinator interactions may cause variation in pollinator-mediated selection on floral traits, but to establish this link conclusively experimental studies are needed. We quantified pollinator-mediated selection on flowering phenology and morphology in four populations of the fragrant orchid Gymnadenia conopsea, and compared selection mediated by diurnal and nocturnal pollinators in two of the populations. Variation in pollinator-mediated selection explained most of the among-population variation in the strength of directional and correlational selection. Pollinators mediated correlational selection on pairs of display traits, and on one display trait and spur length, a trait affecting pollination efficiency. Only nocturnal pollinators selected for longer spurs, and mediated stronger selection on the number of flowers compared with diurnal pollinators in one population. The two types of pollinators caused correlational selection on different pairs of traits and selected for different combinations of spur length and number of flowers. The results demonstrate that spatial variation in interactions with pollinators may result in differences in directional and correlational selection on floral traits in a plant with a semi-generalized pollination system, and suggest that differences in the relative importance of diurnal and nocturnal pollinators can cause variation in selection. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

Root structure-function relationships in 74 species: evidence of a root economics spectrum related to carbon economy.

PubMed

Roumet, Catherine; Birouste, Marine; Picon-Cochard, Catherine; Ghestem, Murielle; Osman, Normaniza; Vrignon-Brenas, Sylvain; Cao, Kun-Fang; Stokes, Alexia

2016-05-01

Although fine roots are important components of the global carbon cycle, there is limited understanding of root structure-function relationships among species. We determined whether root respiration rate and decomposability, two key processes driving carbon cycling but always studied separately, varied with root morphological and chemical traits, in a coordinated way that would demonstrate the existence of a root economics spectrum (RES). Twelve traits were measured on fine roots (diameter ≤ 2 mm) of 74 species (31 graminoids and 43 herbaceous and dwarf shrub eudicots) collected in three biomes. The findings of this study support the existence of a RES representing an axis of trait variation in which root respiration was positively correlated to nitrogen concentration and specific root length and negatively correlated to the root dry matter content, lignin : nitrogen ratio and the remaining mass after decomposition. This pattern of traits was highly consistent within graminoids but less consistent within eudicots, as a result of an uncoupling between decomposability and morphology, and of heterogeneity of individual roots of eudicots within the fine-root pool. The positive relationship found between root respiration and decomposability is essential for a better understanding of vegetation-soil feedbacks and for improving terrestrial biosphere models predicting the consequences of plant community changes for carbon cycling. © 2016 CNRS. New Phytologist © 2016 New Phytologist Trust.

SU-D-207A-07: The Effects of Inter-Cycle Respiratory Motion Variation On Dose Accumulation in Single Fraction MR-Guided SBRT Treatment of Renal Cell Carcinoma

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stemkens, B; Glitzner, M; Kontaxis, C

Purpose: To assess the dose deposition in simulated single-fraction MR-Linac treatments of renal cell carcinoma, when inter-cycle respiratory motion variation is taken into account using online MRI. Methods: Three motion characterization methods, with increasing complexity, were compared to evaluate the effect of inter-cycle motion variation and drifts on the accumulated dose for an SBRT kidney MR-Linac treatment: 1) STATIC, in which static anatomy was assumed, 2) AVG-RESP, in which 4D-MRI phase-volumes were time-weighted, based on the respiratory phase and 3) PCA, in which 3D volumes were generated using a PCA-model, enabling the detection of inter-cycle variations and drifts. An experimentalmore » ITV-based kidney treatment was simulated in a 1.5T magnetic field on three volunteer datasets. For each volunteer a retrospectively sorted 4D-MRI (ten respiratory phases) and fast 2D cine-MR images (temporal resolution = 476ms) were acquired to simulate MR-imaging during radiation. For each method, the high spatio-temporal resolution 3D volumes were non-rigidly registered to obtain deformation vector fields (DVFs). Using the DVFs, pseudo-CTs (generated from the 4D-MRI) were deformed and the dose was accumulated for the entire treatment. The accuracies of all methods were independently determined using an additional, orthogonal 2D-MRI slice. Results: Motion was most accurately estimated using the PCA method, which correctly estimated drifts and inter-cycle variations (RMSE=3.2, 2.2, 1.1mm on average for STATIC, AVG-RESP and PCA, compared to the 2DMRI slice). Dose-volume parameters on the ITV showed moderate changes (D99=35.2, 32.5, 33.8Gy for STATIC, AVG-RESP and PCA). AVG-RESP showed distinct hot/cold spots outside the ITV margin, which were more distributed for the PCA scenario, since inter-cycle variations were not modeled by the AVG-RESP method. Conclusion: Dose differences were observed when inter-cycle variations were taken into account. The increased inter-cycle randomness in motion as captured by the PCA model mitigates the local (erroneous) hotspots estimated by the AVG-RESP method.« less

Seed source variation in tracheid length and specific gravity of five-year-old jack pine seedlings

Treesearch

James P. King

1968-01-01

Jack pine (Pinus banksiana Lamb.) is widely used in Lake States reforestation because of its ability to make rapid early growth on relatively infertile sites. It is a major pulpwood producing species. Since the quality and yield of pulp are so strongly influenced by tracheid length and specific gravity, information on genetic variation in these...

Explaining the variation in the shear force of lamb meat using sarcomere length, the rate of rigor onset and pH.

PubMed

Hopkins, D L; Toohey, E S; Lamb, T A; Kerr, M J; van de Ven, R; Refshauge, G

2011-08-01

The temperature when the pH=6.0 (temp@pH6) impacts on the tenderness and eating quality of sheep meat. Due to the expense, sarcomere length is not routinely measured as a variable to explain variation in shear force, but whether measures such as temp@pH6 are as useful a parameter needs to be established. Measures of rigor onset in 261 carcases, including the temp@pH6, were evaluated in this study for their ability to explain some of the variation in shear force. The results show that for 1 day aged product combinations of the temp@pH6, the pH at 18 °C and the pH at 24 h provided a larger reduction (almost double) in total shear force variation than sarcomere length alone, with pH at 24 h being the single best measure. For 5 day aged product, pH at 18 °C was the single best measure. Inclusion of sarcomere length did represent some improvement, but the marginal increase would not be cost effective. Crown Copyright © 2011. Published by Elsevier Ltd. All rights reserved.

Do diagnosis-related groups appropriately explain variations in costs and length of stay of hip replacement? A comparative assessment of DRG systems across 10 European countries.

PubMed

Geissler, Alexander; Scheller-Kreinsen, David; Quentin, Wilm

2012-08-01

This paper assesses the variations in costs and length of stay for hip replacement cases in Austria, England, Estonia, Finland, France, Germany, Ireland, Poland, Spain and Sweden and examines the ability of national diagnosis-related group (DRG) systems to explain the variation in resource use against a set of patient characteristic and treatment specific variables. In total, 195,810 cases clustered in 712 hospitals were analyzed using OLS fixed effects models for cost data (n=125,698) and negative binominal models for length-of-stay data (n=70,112). The number of DRGs differs widely across the 10 European countries (range: 2-14). Underlying this wide range is a different use of classification variables, especially secondary diagnoses and treatment options are considered to a different extent. In six countries, a standard set of patient characteristics and treatment variables explain the variation in costs or length of stay better than the DRG variables. This raises questions about the adequacy of the countries' DRG system or the lack of specific criteria, which could be used as classification variables. Copyright © 2012 John Wiley & Sons, Ltd.

Clock gene evolution: seasonal timing, phylogenetic signal, or functional constraint?

PubMed

Krabbenhoft, Trevor J; Turner, Thomas F

2014-01-01

Genetic determinants of seasonal reproduction are not fully understood but may be important predictors of organism responses to climate change. We used a comparative approach to study the evolution of seasonal timing within a fish community in a natural common garden setting. We tested the hypothesis that allelic length variation in the PolyQ domain of a circadian rhythm gene, Clock1a, corresponded to interspecific differences in seasonal reproductive timing across 5 native and 1 introduced cyprinid fishes (n = 425 individuals) that co-occur in the Rio Grande, NM, USA. Most common allele lengths were longer in native species that initiated reproduction earlier (Spearman's r = -0.70, P = 0.23). Clock1a allele length exhibited strong phylogenetic signal and earlier spawners were evolutionarily derived. Aside from length variation in Clock1a, all other amino acids were identical across native species, suggesting functional constraint over evolutionary time. Interestingly, the endangered Rio Grande silvery minnow (Hybognathus amarus) exhibited less allelic variation in Clock1a and observed heterozygosity was 2- to 6-fold lower than the 5 other (nonimperiled) species. Reduced genetic variation in this functionally important gene may impede this species' capacity to respond to ongoing environmental change.

A Compound-Specific Hydrogen Isotope Record at the Onset of Ocean Anoxic Event 2, Kaiparowits Plateau, Southern Utah

NASA Astrophysics Data System (ADS)

Todes, J.; Jones, M. M.; Sageman, B. B.; Osburn, M. R.

2017-12-01

Rhythmic lithologic variations (limestone-shale couplets) interpreted to reflect Milankovitch cycles occur at the onset of Ocean Anoxic Event 2 (OAE2) in deposits of the Western Interior Seaway. These couplets have been interpreted to reflect climate cycles: however, the physical mechanism(s) through which climate cycles were translated to the sedimentary record during peak greenhouse conditions remain unsettled. Although glacioeustasy has been considered, variance in surface ocean temperature, ocean circulation, or local hydrology may be more plausible options. Compound-specific hydrogen isotope ratios (δ2H) of n-alkanes and other biomarkers may provide a means to evaluate such mechanisms. Since sedimentary alkanes are direct products of plants and membrane lipid diagenesis and are resistant to secondary hydrogen exchange during thermal maturation at low (<100 oC) temperatures, they have the potential to reflect the isotopic composition of primary waters. The Tropic Shale of the Kaiparowits Plateau (Southern Utah) provides an exceptional opportunity to explore δ2H variability in this interval. Outcrop samples of three couplets have been extracted, separated, and analyzed to ascertain facies-specific δ2H variability. Strong odd-over-even n-alkane chain length distributions suggest low thermal maturity and the possible preservation of primary δ2H values. Short and long chain ­n-alkanes are potentially sourced from planktonic biomass and terrestrial plants, respectively, enabling a comparison of climatic processes between marine and terrestrial settings. Biomarkers, including both steranes and hopanes, are also preserved and reflect putative source organisms and local paleoenvironmental conditions. Facies-specific δ2H analysis will allow for evaluation of changes in the dominant source of atmospheric moisture in the Western Interior during orbitally-forced climate cycles. Organic matter deposited during periods of northerly Boreal influence would have a depleted 2H-isotope composition relative to those deposited during periods of more southerly Tethys influence. In this model, these variations are reflected by lithology - limestone deposition would occur during warm, evaporative Tethys-dominated times, while cooler, wetter Boreal periods would promote shale deposition.

Cyclic fatigue of ProTaper instruments.

PubMed

Lopes, Hélio Pereira; Moreira, Edson Jorge Lima; Elias, Carlos Nelson; de Almeida, Renata Andriola; Neves, Mônica Schultz

2007-01-01

The present work evaluated the influence of the curved segment length of artificial root canals (the arc) and the number of cycles necessary to fracture engine-driven nickel-titanium endodontic instruments. ProTaper F3 25-mm files at 250 rpm were used in two artificial canals. The artificial canals were made of stainless steel with an inner diameter of 1.04 mm, a total length of 20 mm, and arc on the ends with a radius of curvature of 6 mm. The arc length of the first tube measured 9.4 mm, and the straight part measured 10.6 mm. The second tube was 14.1 mm long, and the straight part measured 5.9 mm. We determined the fracture surface distances and the number of cycles necessary to induce fatigue fracture in the ProTaper F3 instruments. The fracture surfaces and the helical shaft of the instruments were investigated using a scanning electron microscope. The results indicated that the required number of cycles to cause a fracture was influenced by the canal arc length, the morphology of the fractured surface presented ductile characteristics, and plastic deformation in the helical shaft of the fractured instruments did not occur.

[The quantitative changes of defeacation during the larval development ofCerura vinula L. (Lepidoptera)].

PubMed

Hintze-Podufal, Ch

1970-12-01

During the larval development ofCerura vinula L. consecutive instars are of increasing length. The time requirement for each instar is temperature dependent. They are shorter at higher and longer at lower temperatures.The data of the first larval instars suggest that the leaves were digested at a much higher rate at 18° C than at 25°C and 30° C. The data of the 5. instar do not show this difference as clearly. During the 5. instar maximum of defeacation was reached by an s-shaped curve. This curve may be divided into two different phases: During the first phase there is a steady increase. During the second phase the rise decreases steadily until the maximum of defeacation is reached. The first phase may be shortened by higher temperatures, while the second phase may not be altered. Short cyclic variations with irregular periodic length of 8-16 hours seeme to be superimposed on this s-shaped curve. There is evidence that the position of their maxima and minima are correlated with the day-night cycle. This effect is described quantitatively by the tendency-curve.

Methods of human body odor sampling: the effect of freezing.

PubMed

Lenochova, Pavlina; Roberts, S Craig; Havlicek, Jan

2009-02-01

Body odor sampling is an essential tool in human chemical ecology research. However, methodologies of individual studies vary widely in terms of sampling material, length of sampling, and sample processing. Although these differences might have a critical impact on results obtained, almost no studies test validity of current methods. Here, we focused on the effect of freezing samples between collection and use in experiments involving body odor perception. In 2 experiments, we tested whether axillary odors were perceived differently by raters when presented fresh or having been frozen and whether several freeze-thaw cycles affected sample quality. In the first experiment, samples were frozen for 2 weeks, 1 month, or 4 months. We found no differences in ratings of pleasantness, attractiveness, or masculinity between fresh and frozen samples. Similarly, almost no differences between repeatedly thawed and fresh samples were found. We found some variations in intensity; however, this was unrelated to length of storage. The second experiment tested differences between fresh samples and those frozen for 6 months. Again no differences in subjective ratings were observed. These results suggest that freezing has no significant effect on perceived odor hedonicity and that samples can be reliably used after storage for relatively long periods.

Synchronous flowering of the rubber tree (Hevea brasiliensis) induced by high solar radiation intensity.

PubMed

Yeang, Hoong-Yeet

2007-01-01

How tropical trees flower synchronously near the equator in the absence of significant day length variation or other meteorological cues has long been a puzzle. The rubber tree (Hevea brasiliensis) is used as a model to investigate this phenomenon. The annual cycle of solar radiation intensity is shown to correspond closely with the flowering of the rubber tree planted near the equator and in the subtropics. Unlike in temperate regions, where incoming solar radiation (insolation) is dependent on both day length and radiation intensity, insolation at the equator is due entirely to the latter. Insolation at the upper atmosphere peaks twice a year during the spring and autumn equinoxes, but the actual solar radiation that reaches the ground is attenuated to varying extents in different localities. The rubber tree shows one or two flowering seasons a year (with major and minor seasons in the latter) in accordance with the solar radiation intensity received. High solar radiation intensity, and in particular bright sunshine (as distinct from prolonged diffuse radiation), induces synchronous anthesis and blooming in Hevea around the time of the equinoxes. The same mechanism may be operational in other tropical tree species.

Cyclic variations of fuel-droplet distribution during the early intake stroke of a lean-burn stratified-charge spark-ignition engine

NASA Astrophysics Data System (ADS)

Aleiferis, P. G.; Hardalupas, Y.; Taylor, A. M. K. P.; Ishii, K.; Urata, Y.

2005-11-01

Lean-burn spark-ignition engines exhibit higher efficiency and lower specific emissions in comparison with stoichiometrically charged engines. However, as the air-to-fuel (A/F) ratio of the mixture is made leaner than stoichiometric, cycle-by-cycle variations in the early stages of in-cylinder combustion, and subsequent indicated mean effective pressure (IMEP), become more pronounced and limit the range of lean-burn operation. Viable lean-burn engines promote charge stratification, the mixture near the spark plug being richer than the cylinder volume averaged value. Recent work has shown that cycle-by-cycle variations in the early stages of combustion in a stratified-charge engine can be associated with variations in both the local value of A/F ratio near the spark plug around ignition timing, as well as in the volume averaged value of the A/F ratio. The objective of the current work was to identify possible sources of such variability in A/F ratio by studying the in-cylinder field of fuel-droplet distribution during the early intake stroke. This field was visualised in an optical single-cylinder 4-valve pentroof-type spark-ignition engine by means of laser-sheet illumination in planes parallel to the cylinder head gasket 6 and 10 mm below the spark plug. The engine was run with port-injected isooctane at 1500 rpm with 30% volumetric efficiency and air-to-fuel ratio corresponding to both stoichiometric firing (A/F=15, Φ =1.0) and mixture strength close to the lean limit of stable operation (A/F=22, Φ =0.68). Images of Mie intensity scattered by the cloud of fuel droplets were acquired on a cycle-by-cycle basis. These were studied in order to establish possible correlations between the cyclic variations in size, location and scattered-light intensity of the cloud of droplets with the respective variations in IMEP. Because of the low level of Mie intensity scattered by the droplets and because of problems related to elastic scattering on the walls of the combustion chamber, as well as problems related to engine “rocking” at the operating conditions close to the misfire limit, the acquired images were processed for background subtraction by using a PIV-based data correction algorithm. After this processing, the arrival and leaving timings of fuel droplets into the illuminated plane were found not to vary significantly on a cycle-by-cycle basis but the recorded cycle-by-cycle variations in Mie intensity suggested that the amount of fuel in the cylinder could have been 6 26% greater for the “strong” cycles with IMEP 115% higher than the average IMEP, than the ones imaged for “weak” cycles at less than 85% the average IMEP. This would correspond to a maximum cyclic variability in the in-cylinder equivalence ratio Φ of the order of 0.17.

11- and 22-year variations of the cosmic ray density and of the solar wind speed

NASA Technical Reports Server (NTRS)

Chirkov, N. P.

1985-01-01

Cosmic ray density variations for 17-21 solar activity cycles and the solar wind speed for 20-21 events are investigated. The 22-year solar wind speed recurrence was found in even and odd cycles. The 22-year variations of cosmic ray density were found to be opposite that of solar wind speed and solar activity. The account of solar wind speed in 11-year variations significantly decreases the modulation region of cosmic rays when E = 10-20 GeV.

Rapid freeze-drying cycle optimization using computer programs developed based on heat and mass transfer models and facilitated by tunable diode laser absorption spectroscopy (TDLAS).

PubMed

Kuu, Wei Y; Nail, Steven L

2009-09-01

Computer programs in FORTRAN were developed to rapidly determine the optimal shelf temperature, T(f), and chamber pressure, P(c), to achieve the shortest primary drying time. The constraint for the optimization is to ensure that the product temperature profile, T(b), is below the target temperature, T(target). Five percent mannitol was chosen as the model formulation. After obtaining the optimal sets of T(f) and P(c), each cycle was assigned with a cycle rank number in terms of the length of drying time. Further optimization was achieved by dividing the drying time into a series of ramping steps for T(f), in a cascading manner (termed the cascading T(f) cycle), to further shorten the cycle time. For the purpose of demonstrating the validity of the optimized T(f) and P(c), four cycles with different predicted lengths of drying time, along with the cascading T(f) cycle, were chosen for experimental cycle runs. Tunable diode laser absorption spectroscopy (TDLAS) was used to continuously measure the sublimation rate. As predicted, maximum product temperatures were controlled slightly below the target temperature of -25 degrees C, and the cascading T(f)-ramping cycle is the most efficient cycle design. In addition, the experimental cycle rank order closely matches with that determined by modeling.

Influence of Stress and Antibiotic Resistance on Cell-Length Distribution in Mycobacterium tuberculosis Clinical Isolates

PubMed Central

Vijay, Srinivasan; Vinh, Dao N.; Hai, Hoang T.; Ha, Vu T. N.; Dung, Vu T. M.; Dinh, Tran D.; Nhung, Hoang N.; Tram, Trinh T. B.; Aldridge, Bree B.; Hanh, Nguyen T.; Thu, Do D. A.; Phu, Nguyen H.; Thwaites, Guy E.; Thuong, Nguyen T. T.

2017-01-01

Mycobacterial cellular variations in growth and division increase heterogeneity in cell length, possibly contributing to cell-to-cell variation in host and antibiotic stress tolerance. This may be one of the factors influencing Mycobacterium tuberculosis persistence to antibiotics. Tuberculosis (TB) is a major public health problem in developing countries, antibiotic persistence, and emergence of antibiotic resistance further complicates this problem. We wanted to investigate the factors influencing cell-length distribution in clinical M. tuberculosis strains. In parallel we examined M. tuberculosis cell-length distribution in a large set of clinical strains (n = 158) from ex vivo sputum samples, in vitro macrophage models, and in vitro cultures. Our aim was to understand the influence of clinically relevant factors such as host stresses, M. tuberculosis lineages, antibiotic resistance, antibiotic concentrations, and disease severity on the cell size distribution in clinical M. tuberculosis strains. Increased cell size and cell-to-cell variation in cell length were associated with bacteria in sputum and infected macrophages rather than liquid culture. Multidrug-resistant (MDR) strains displayed increased cell length heterogeneity compared to sensitive strains in infected macrophages and also during growth under rifampicin (RIF) treatment. Importantly, increased cell length was also associated with pulmonary TB disease severity. Supporting these findings, individual host stresses, such as oxidative stress and iron deficiency, increased cell-length heterogeneity of M. tuberculosis strains. In addition we also observed synergism between host stress and RIF treatment in increasing cell length in MDR-TB strains. This study has identified some clinical factors contributing to cell-length heterogeneity in clinical M. tuberculosis strains. The role of these cellular adaptations to host and antibiotic tolerance needs further investigation. PMID:29209302

Dynamic energy budget model: a monitoring tool for growth and reproduction performance of Mytilus galloprovincialis in Bizerte Lagoon (Southwestern Mediterranean Sea).

PubMed

Béjaoui-Omri, Amel; Béjaoui, Béchir; Harzallah, Ali; Aloui-Béjaoui, Nejla; El Bour, Monia; Aleya, Lotfi

2014-11-01

Mussel farming is the main economic activity in Bizerte Lagoon, with a production that fluctuates depending on environmental factors. In the present study, we apply a bioenergetic growth model to the mussel Mytilus galloprovincialis, based on dynamic energy budget (DEB) theory which describes energy flux variation through the different compartments of the mussel body. Thus, the present model simulates both mussel growth and sexual cycle steps according to food availability and water temperature and also the effect of climate change on mussel behavior and reproduction. The results point to good concordance between simulations and growth parameters (metric length and weight) for mussels in the lagoon. A heat wave scenario was also simulated using the DEB model, which highlighted mussel mortality periods during a period of high temperature.

Temperature Effects in the ATIC BGO Calorimeter

NASA Technical Reports Server (NTRS)

Isbert, J.; Adams, J. H.; Ahn, H.; Bashindzhagyan, G.; Batkov, K.; Chang, J.; Christl, M. J.; Fazely, A.; Ganel, O.; Gunasigha, R.

2006-01-01

The Advanced Thin Ionization Calorimeter (ATIC) Balloon Experiment contains a segmented calorimeter composed of 320 individual BGO crystals (18 radiation lengths deep) to determine the particle energy. Like all inorganic scintillation crystals the light output of BGO depends not only on the energy deposited by particles but also on the temperature of the crystal. ATIC had successful flights in 2000/2001 and 2002/2003 from McMurdo, Antarctica. The temperature of balloon instruments varies during their flights at altitude due to sun angle variations and differences in albedo from the ground and is monitored and recorded. In order to determine the temperature sensitivity of the ATIC calorimeter it was temperature cycled in the thermal vacuum chamber at the CSBF in Palestine, TX. The temperature dependence is derived from the pulse height response to cosmic ray muons at various temperatures.

CO 2 water-alternating-gas injection for enhanced oil recovery: Optimal well controls and half-cycle lengths

DOE PAGES

Chen, Bailian; Reynolds, Albert C.

2018-03-11

We report that CO 2 water-alternating-gas (WAG) injection is an enhanced oil recovery method designed to improve sweep efficiency during CO 2 injection with the injected water to control the mobility of CO 2 and to stabilize the gas front. Optimization of CO 2 -WAG injection is widely regarded as a viable technique for controlling the CO 2 and oil miscible process. Poor recovery from CO 2 -WAG injection can be caused by inappropriately designed WAG parameters. In previous study (Chen and Reynolds, 2016), we proposed an algorithm to optimize the well controls which maximize the life-cycle net-present-value (NPV). However,more » the effect of injection half-cycle lengths for each injector on oil recovery or NPV has not been well investigated. In this paper, an optimization framework based on augmented Lagrangian method and the newly developed stochastic-simplex-approximate-gradient (StoSAG) algorithm is proposed to explore the possibility of simultaneous optimization of the WAG half-cycle lengths together with the well controls. Finally, the proposed framework is demonstrated with three reservoir examples.« less

CO 2 water-alternating-gas injection for enhanced oil recovery: Optimal well controls and half-cycle lengths

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Bailian; Reynolds, Albert C.

We report that CO 2 water-alternating-gas (WAG) injection is an enhanced oil recovery method designed to improve sweep efficiency during CO 2 injection with the injected water to control the mobility of CO 2 and to stabilize the gas front. Optimization of CO 2 -WAG injection is widely regarded as a viable technique for controlling the CO 2 and oil miscible process. Poor recovery from CO 2 -WAG injection can be caused by inappropriately designed WAG parameters. In previous study (Chen and Reynolds, 2016), we proposed an algorithm to optimize the well controls which maximize the life-cycle net-present-value (NPV). However,more » the effect of injection half-cycle lengths for each injector on oil recovery or NPV has not been well investigated. In this paper, an optimization framework based on augmented Lagrangian method and the newly developed stochastic-simplex-approximate-gradient (StoSAG) algorithm is proposed to explore the possibility of simultaneous optimization of the WAG half-cycle lengths together with the well controls. Finally, the proposed framework is demonstrated with three reservoir examples.« less

Quasi-periodic changes in the 3D solar anisotropy of Galactic cosmic rays for 1965-2014

NASA Astrophysics Data System (ADS)

Modzelewska, R.; Alania, M. V.

2018-01-01

Aims: We study features of the 3D solar anisotropy of Galactic cosmic rays (GCR) for 1965-2014 (almost five solar cycles, cycles 20-24). We analyze the 27-day variations of the 2D GCR anisotropy in the ecliptic plane and the north-south anisotropy normal to the ecliptic plane. We study the dependence of the 27-day variation of the 3D GCR anisotropy on the solar cycle and solar magnetic cycle. We demonstrate that the 27-day variations of the GCR intensity and anisotropy can be used as an important tool to study solar wind, solar activity, and heliosphere. Methods: We used the components Ar, Aϕ and At of the 3D GCR anisotropy that were found based on hourly data of neutron monitors (NMs) and muon telescopes (MTs) using the harmonic analyses and spectrographic methods. We corrected the 2D diurnal ( 24-h) variation of the GCR intensity for the influence of the Earth magnetic field. We derived the north-south component of the GCR anisotropy based on the GG index, which is calculated as the difference in GCR intensities of the Nagoya multidirectional MTs. Results: We show that the behavior of the 27-day variation of the 3D anisotropy verifies a stable long-lived active heliolongitude on the Sun. This illustrates the usefulness of the 27-day variation of the GCR anisotropy as a unique proxy to study solar wind, solar activity, and heliosphere. We distinguish a tendency of the 22-yr changes in amplitude of the 27-day variation of the 2D anisotropy that is connected with the solar magnetic cycle. We demonstrate that the amplitudes of the 27-day variation of the north-south component of the anisotropy vary with the 11-yr solar cycle, but a dependence of the solar magnetic polarity can hardly be recognized. We show that the 27-day recurrences of the GG index and the At component are highly positively correlated, and both are highly correlated with the By component of the heliospheric magnetic field.

Spatial regression analysis on 32 years of total column ozone data

NASA Astrophysics Data System (ADS)

Knibbe, J. S.; van der A, R. J.; de Laat, A. T. J.

2014-08-01

Multiple-regression analyses have been performed on 32 years of total ozone column data that was spatially gridded with a 1 × 1.5° resolution. The total ozone data consist of the MSR (Multi Sensor Reanalysis; 1979-2008) and 2 years of assimilated SCIAMACHY (SCanning Imaging Absorption spectroMeter for Atmospheric CHartographY) ozone data (2009-2010). The two-dimensionality in this data set allows us to perform the regressions locally and investigate spatial patterns of regression coefficients and their explanatory power. Seasonal dependencies of ozone on regressors are included in the analysis. A new physically oriented model is developed to parameterize stratospheric ozone. Ozone variations on nonseasonal timescales are parameterized by explanatory variables describing the solar cycle, stratospheric aerosols, the quasi-biennial oscillation (QBO), El Niño-Southern Oscillation (ENSO) and stratospheric alternative halogens which are parameterized by the effective equivalent stratospheric chlorine (EESC). For several explanatory variables, seasonally adjusted versions of these explanatory variables are constructed to account for the difference in their effect on ozone throughout the year. To account for seasonal variation in ozone, explanatory variables describing the polar vortex, geopotential height, potential vorticity and average day length are included. Results of this regression model are compared to that of a similar analysis based on a more commonly applied statistically oriented model. The physically oriented model provides spatial patterns in the regression results for each explanatory variable. The EESC has a significant depleting effect on ozone at mid- and high latitudes, the solar cycle affects ozone positively mostly in the Southern Hemisphere, stratospheric aerosols affect ozone negatively at high northern latitudes, the effect of QBO is positive and negative in the tropics and mid- to high latitudes, respectively, and ENSO affects ozone negatively between 30° N and 30° S, particularly over the Pacific. The contribution of explanatory variables describing seasonal ozone variation is generally large at mid- to high latitudes. We observe ozone increases with potential vorticity and day length and ozone decreases with geopotential height and variable ozone effects due to the polar vortex in regions to the north and south of the polar vortices. Recovery of ozone is identified globally. However, recovery rates and uncertainties strongly depend on choices that can be made in defining the explanatory variables. The application of several trend models, each with their own pros and cons, yields a large range of recovery rate estimates. Overall these results suggest that care has to be taken in determining ozone recovery rates, in particular for the Antarctic ozone hole.

Cell-free DNA and telomere length among women undergoing in vitro fertilization treatment.

PubMed

Czamanski-Cohen, J; Sarid, O; Cwikel, J; Douvdevani, A; Levitas, E; Lunenfeld, E; Har-Vardi, I

2015-11-01

The current research is aimed at finding potential non-invasive bio-markers that will help us learn more about the mechanisms at play in failed assisted reproduction treatment. This exploratory pilot study examined the relationship between cell-free DNA (CFD) in plasma and telomere length in lymphocytes among women undergoing in vitro fertilization (IVF) and compared telomere length and CFD levels to a healthy control group. Blood of 20 women undergoing IVF was collected at three time points during the IVF cycle. We assessed the relationship between CFD and telomere length as well as controlling for morning cortisol levels. We also collected blood of 10 healthy controls at two time points (luteal and follicular phases of the menstrual cycle) and compared mean telomere length, CFD, and cortisol levels between the IVF patients and healthy controls. The results revealed an inverse relationship between CFD levels and telomere lengths at several time points that remained significant even after controlling for cortisol levels. Women undergoing IVF had statistically significant higher levels of CFD and shorter telomeres compared to healthy controls. The relationship between telomere length and CFD should be further explored in larger studies in order to uncover potential mechanisms that cause both shortened telomere length and elevated CFD in women undergoing IVF.

Uterine Junctional Zone Thickness, Cervical Length and Bioelectrical Impedance Analysis of Body Composition in Women with Endometriosis

PubMed Central

Ayas, Selçuk; Bayraktar, Mesut; Gürbüz, Ayşe; Alkan, Akif; Eren, Sadiye

2012-01-01

Objective: We aimed to evaluate uterine junctional zone thickness, cervical length and bioelectrical impedance analysis of body composition in women with endometriosis. Material and Methods: This is a prospective study conducted in a tertiary teaching hospital. A total of 73 patients were included in the study. Endometriosis was surgically diagnosed in 36 patients (study group). The control group included 37 patients. Main outcome measure(s): Bioelectrical impedance analysis was used to measure body composition. Uterine junctional zone thickness and cervical length were measured by transvaginal ultrasonography. Results: Patients’ characteristics (age, gravida, parity, live baby, age of menarche, lengths of menstrual cycle, percentage of patients with dysmenorrhea, positive family history), body mass index (BMI) (kg/m2), amount of body fat (kg), percentage of body fat were not statistically different between the two groups (p>0.05). The length of menstruation and cervical length were longer in women with endometriosis. Similarly, the inner myometrium was thicker in women with endometriosis than the control group. Conclusion: The relation between endometriosis and demographic features such as age, gravida, parity, gravida, BMI, lengths of the menstrual cycle, age of menarche are controversial. Longer cervical length and thicker inner myometrial layer may be important in the etiopathogenesis of endometriosis. PMID:25207044

The ecology and evolutionary endocrinology of reproduction in the human female.

PubMed

Vitzthum, Virginia J

2009-01-01

Human reproductive ecology (HRE) is the study of the mechanisms that link variation in reproductive traits with variation in local habitats. Empirical and theoretical contributions from biological anthropology, physiology, and demography have established the foundation necessary for developing a comprehensive understanding, grounded in life history theory (LHT), of temporal, individual, and populational variation in women's reproductive functioning. LHT posits that natural selection leads to the evolution of mechanisms that tend to allocate resources to the competing demands of growth, reproduction, and survival such that fitness is locally maximized. (That is, among alternative allocation patterns exhibited in a population, those having the highest inclusive fitness will become more common over generational time.) Hence, strategic modulation of reproductive effort is potentially adaptive because investment in a new conception may risk one's own survival, future reproductive opportunities, and/or current offspring survival. The hypothalamic-pituitary-ovarian (HPO) axis is the principal neuroendocrine pathway by which the human female modulates reproductive functioning according to the changing conditions in her habitat. Adjustments of reproductive investment in a potential conception are manifested in temporal and individual variation in ovarian cycle length, ovulation, hormone levels, and the probability of conception. Understanding the extent and causes of adaptive and non-adaptive variation in ovarian functioning is fundamental to ascertaining the proximate and remote determinants of human reproductive patterns. In this review I consider what is known and what still needs to be learned of the ecology of women's reproductive biology, beginning with a discussion of the principal explanatory frameworks in HRE and the biometry of ovarian functioning. Turning next to empirical studies, it is evident that marked variation between cycles, women, and populations is the norm rather than an aberration. Other than woman's age, the determinants of these differences are not well characterized, although developmental conditions, dietary practices, genetic variation, and epigenetic mechanisms have all been hypothesized to play some role. It is also evident that the reproductive functioning of women born and living in arduous conditions is not analogous to that of athletes, dieters, or even the lower end of the "normal range" of HPO functioning in wealthier populations. Contrary to the presumption that humans have low fecundity and an inefficient reproductive system, both theory and present evidence suggest that we may actually have very high fecundity and a reproductive system that has evolved to be flexible, ruthlessly efficient and, most importantly, strategic. Copyright 2009 Wiley-Liss, Inc.

Fully Modulated Turbulent Diffusion Flames in Microgravity*

NASA Astrophysics Data System (ADS)

Sangras, Ravikiran; Hermanson, James C.; Johari, Hamid; Stocker, Dennis P.; Hegde, Uday G.

2001-11-01

Fully modulated, turbulent diffusion flames are studied in microgravity in 2.2 s drop-tower tests with a co-flow combustor. The fuel consists of pure ethylene or a 50/50 mixture with nitrogen; the oxidizer is either normal air or up to 40% oxygen in nitrogen. A fast solenoid valve is used to fully modulate (completely shut off) the fuel flow. The injection times range from 5 to 400 ms with a duty-cycle of 0.1 - 0.5. The fuel nozzle is 2 mm in diameter with a jet Reynolds number of 5000. The shortest injection times yield compact puffs with a mean flame length as little as 20% of that of the steady-state flame. The reduction in flame length appears to be somewhat greater in microgravity than in normal gravity. As the injection time increases, elongated flames result with a mean flame length comparable to that of a steady flame. The injection time for which the steady-state flame length is approached is shorter for lower air/fuel ratios. For a given duty-cycle, the separation between puffs is greater in microgravity than in normal gravity. For compact puffs, increasing the duty-cycle appears to increase the flame length more in microgravity than in normal gravity. The microgravity flame puffs do not exhibit the vortex-ring-like structure seen in normal gravity.

Extracting the respiration cycle lengths from ECG signal recorded with bed sheet electrodes

NASA Astrophysics Data System (ADS)

Vehkaoja, A.; Peltokangas, M.; Lekkala, J.

2013-09-01

A method for recognizing the respiration cycle lengths from the electrocardiographic (ECG) signal recorded with textile electrodes that are attached to a bed sheet is proposed. The method uses two features extracted from the ECG that are affected by the respiration: respiratory sinus arrhythmia and the amplitude of the R-peaks. The proposed method was tested in one hour long recordings with ten healthy young adults. A relative mean absolute error of 5.6 % was achieved when the algorithm was able to provide a result for approximately 40 % of the time. 90 % of the values were within 0.5 s and 97 % within 1 s from the reference respiration value. In addition to the instantaneous respiration cycle lengths, also the mean values during 1 and 5 minutes epochs are calculated. The effect of the ECG signal source is evaluated by calculating the result also from the simultaneously recorded reference ECG signal. The acquired respiration information can be used in the estimation of sleep quality and the detection of sleep disorders.

Solar Cycle Variations and Equatorial Oscillations: Modeling Study

NASA Technical Reports Server (NTRS)

Mayr, H. G.; Mengel, J. G.; Drob, D. P.; Chan, K. L.; Porter, H. S.; Bhartia, P. K. (Technical Monitor)

2001-01-01

Solar cycle activity effects (SCAE) in the lower and middle atmosphere, reported in several studies, are difficult to explain on the basis of the small changes in solar radiation that accompany the 11-year cycle, It is therefore natural to speculate that dynamical processes may come into play to produce a leverage. Such a leverage may be provided by the Quasi-Biennial Oscillation (QBO) in the zonal circulation of the stratosphere, which has been linked to solar activity variations. Driven primarily by wave mean flow interaction, the QBO period and its amplitude are variable but are also strongly influenced by the seasonal cycle in the solar radiation. This influence extends to low altitudes referred to as "downward control". Relatively small changes in solar radiative forcing can produce small changes in the period and phase of the QBO, but this in turn can produce measurable differences in the wind field. Thus, the QBO may be an amplifier of solar activity variations and a natural conduit of these variations to lower altitudes. To test this hypothesis, we conducted experiments with a 2D (two-dimensional) version of our Numerical Spectral Model that incorporates Hines' Doppler Spread Parameterization for small-scale gravity waves (GW). Solar cycle radiance variations (SCRV) are accounted for by changing the radiative heating rate on a logarithmic scale from 0.1 % at the surface to 1 % at 50 km to 10% at 100 km. With and without SCRV, but with the same GW flux, we then conduct numerical experiments to evaluate the magnitude of the SCAE in the zonal circulation. The numerical results indicate that, under certain conditions, the SCAE is significant and can extend to lower altitudes where the SCRV is inconsequential. At 20-km the differences in the modeled wind velocities are as large as 5 m/s. For a modeled QBO period of 30 months, we find that the seasonal cycle in the solar forcing (through the Semi-annual Oscillation (SAO)) acts as a strong pacemaker to lockup the phase and period of the QBO. The SCAE then shows up primarily as a distinct but relatively weak amplitude modulation. But with the QBO period between 30 and 34 (or less than 30, presumably) months, the seasonal phase lock is weak. Solar flux radiance variations in the seasonal cycle then cause variations in the QBO period and phase that amplify the SCAE to produce relatively large variations in the wind field. These variations also extend to mid latitudes.

Linking diurnal cycles of river flow to interannual variations in climate

USGS Publications Warehouse

Lundquist, Jessica D.; Dettinger, Michael D.

2003-01-01

Many rivers in the Western United States have diurnal variations exceeding 10% of their mean flow in the spring and summer months. The shape and timing of the diurnal cycle is influenced by an interplay of the snow, topography, vegetation, and meteorology in a basin, and the measured result differs between wet and dry years. The largest interannual differences occur during the latter half of the melt season, as the snowline retreats to the highest elevations and most shaded slopes in a basin. In most basins, during this period, the hour of peak discharge shifts to later in the day, and the relative amplitude of the diurnal cycle decreases. The magnitude and rate of these changes in the diurnal cycle vary between years and may provide clues about how long- term hydroclimatic variations affect short-term basin dynamics.

Comparative study of the female gametogenic cycle in three populations of Buccinanops globulosus (Caenogastropoda: Nassariidae) from Patagonia

NASA Astrophysics Data System (ADS)

Avaca, María Soledad; Martín, Pablo; van der Molen, Silvina; Narvarte, Maite

2015-03-01

The populations of Buccinanops globulosus from three different sites of northern Patagonia were compared in the female reproductive cycle over a 2-year study period (September 2006-August 2008). These populations differed in demographic and life-history traits (sex ratios, size frequency distributions, growth rates and fecundity). Also, two of these populations show imposex-affected females (Bahía San Antonio, BSA and Bahía Nueva, BN), whereas the other (Playa Villarino, PV) is imposex-free and constitutes a commercial fishery ground for this species. The gametogenic activity of this species has not been studied earlier. Females showed the same gonadal stages in the three populations; however, there were differences in the female size at which each gonadal stage occurred. Monthly variation in gonadal stages and in oocyte size indicated that females of B. globulosus showed a seasonal gametogenic pattern without the occurrence of a resting period. Evacuation of mature oocytes (up to 252.5 µm) occurred mainly from September to December (austral spring) in BSA and PV and from December to March (austral summer) in BN. Gonad maturation and the presence of females carrying egg capsules in the field coincided with changes in water surface temperature and a longer day length. Our results indicate that the occurrence of imposex in the populations studied apparently does not affect the gametogenic activity in females. This study provides further insights into the reproductive biology of B. globulosus. The identification of population variation in reproductive traits should lead to more effective management of the species.

The role of ecosystem memory in predicting inter-annual variations of the tropical carbon balance.

NASA Astrophysics Data System (ADS)

Bloom, A. A.; Liu, J.; Bowman, K. W.; Konings, A. G.; Saatchi, S.; Worden, J. R.; Worden, H. M.; Jiang, Z.; Parazoo, N.; Williams, M. D.; Schimel, D.

2017-12-01

Understanding the trajectory of the tropical carbon balance remains challenging, in part due to large uncertainties in the integrated response of carbon cycle processes to climate variability. Satellite observations atmospheric CO2 from GOSAT and OCO-2, together with ancillary satellite measurements, provide crucial constraints on continental-scale terrestrial carbon fluxes. However, an integrated understanding of both climate forcings and legacy effects (or "ecosystem memory") on the terrestrial carbon balance is ultimately needed to reduce uncertainty on its future trajectory. Here we use the CARbon DAta-MOdel fraMework (CARDAMOM) diagnostic model-data fusion approach - constrained by an array of C cycle satellite surface observations, including MODIS leaf area, biomass, GOSAT solar-induced fluorescence, as well as "top-down" atmospheric inversion estimates of CO2 and CO surface fluxes from the NASA Carbon Monitoring System Flux (CMS-Flux) - to constrain and predict spatially-explicit tropical carbon state variables during 2010-2015. We find that the combined assimilation of land surface and atmospheric datasets places key constraints on the temperature sensitivity and first order carbon-water feedbacks throughout the tropics and combustion factors within biomass burning regions. By varying the duration of the assimilation period, we find that the prediction skill on inter-annual net biospheric exchange is primarily limited by record length rather than model structure and process representation. We show that across all tropical biomes, quantitative knowledge of memory effects - which account for 30-50% of interannual variations across the tropics - is critical for understanding and ultimately predicting the inter-annual tropical carbon balance.

Biophysical characterization of a swimmer with a unilateral arm amputation: a case study.

PubMed

Figueiredo, Pedro; Willig, Renata; Alves, Francisco; Vilas-Boas, João Paulo; Fernandes, Ricardo J

2014-11-01

To examine the effect of swimming speed (v) on the biomechanical and physiological responses of a trained front-crawl swimmer with a unilateral arm amputation. A 13-y-old girl with a unilateral arm amputation (level of the elbow) was tested for stroke length (SL, horizontal displacement cover with each stroke cycle), stroke frequency (SF, inverse of the time to complete each stroke cycle), adapted index of coordination (IdCadapt, lag time between propulsive phases), intracycle velocity variation (IVV, coefficient of variation of the instantaneous velocity-time data), active drag (D, hydrodynamic resistance), and energy cost (C, ratio of metabolic power to speed) during trials of increasing v. Swimmer data showed a positive relationship between v and SF (R² = 1, P < .001), IVV (R² = .98, P = .002), D (R² = .98, P < .001), and C (R² = .95, P = .001) and a negative relationship with the SL (R² = .99, P = .001). No relation was found between v and IdCadapt (R² = .35, P = .22). A quadratic regression best fitted the relationship between v and general kinematical parameters (SL and SF); a cubic relationship fit the IVV best. The relationship between v and D was best expressed by a power regression, and the linear regression fit the C and IdCadapt best. The subject's adaptation to increased v was different from able-bodied swimmers, mainly on interarm coordination, maintaining the lag time between propulsive phases, which influence the magnitude of the other parameters. These results might be useful to develop specific training and enhance swimming performance in swimmers with amputations.

Temporal and maternal effects on reproductive ecology of the giant gartersnake (Thamnophis gigas)

USGS Publications Warehouse

Halstead, Brian J.; Wylie, Glenn D.; Casazza, Michael L.; Coates, Peter S.

2009-01-01

We used mixed-effects models to examine relationships of reproductive characteristics of the giant gartersnake (Thamnophis gigas) to improve population modeling and conservation planning for this species. Neonates from larger litters had lower mass, and mass of neonates also was affected by random variation among mothers. Length of mother did not affect relative mass of litters; however, our data suggest that longer mothers expended less reproductive effort per offspring than shorter mothers. We detected random variation in length of neonates among mothers, but these lengths were not related to length of mother or size of litter. Mean size of litter varied among years, but little evidence existed for a relationship between size of litter or mass of litter and length of mother. Sex ratios of neonates did not differ from 1:1.

Anogenital distance of women in relation to their mother's gynaecological characteristics before or during pregnancy.

PubMed

Mira-Escolano, María-Pilar; Mendiola, Jaime; Mínguez-Alarcón, Lidia; Roca, Manuela; Cutillas-Tolín, Ana; López-Espín, José J; Torres-Cantero, Alberto M

2014-02-01

Animal models suggest that anogenital distance (AGD) at birth reflects androgen concentrations during in-utero development and predicts adult AGD. Several human observational studies show an association between menstrual cycle irregularities and a hyperandrogenic environment and that may result in a potential alteration of the female reproductive tract during in-utero development. This study examined associations between AGD of young women and their mother's gynaecological characteristics before or during pregnancy. This is cross-sectional study of 100 college-age volunteers in southern Spain. Physical and gynaecological examinations were conducted on the young women and they and their mothers completed epidemiological questionnaires on lifestyles and gynaecological history. Linear regression analysis was used to examine the association between AGD measurements (anus-fourchette (AGDAF) and anus-clitoris (AGDAC)) of women and their mother's gynaecological characteristics. Longer AGDAF was associated with the presence of mother's menstrual cycle irregularities before pregnancy (P=0.03). Longer female AGD has been related to excess androgen exposure in utero in toxicological studies. The current findings may be consistent with studies in which an association between menstrual cycle irregularities and an hyperandrogenic environment has been reported, which therefore may result in a potential modification of the female offspring's reproductive tract during in-utero development, including AGD. Rodent models suggest that perineal length at birth reflects male hormone concentrations (androgens) during in-utero development and predicts adult perineal length. Several human studies show a relationship between menstrual cycle irregularities and an excessive androgen environment. We hypothesize that androgen excess may result in a potential alteration of the female reproductive tract during in-utero development. Our aim was to examine associations between perineal length of young women and their mother's gynaecological characteristics before or during pregnancy. This is a study of 100 college-age volunteers in Southern Spain. Physical and gynaecological examinations were conducted on the young women and they and their mothers completed epidemiological questionnaires on lifestyles and gynaecological history. We used multivariate analyses to assess the association between perineal length of women and their mother's gynaecological characteristics. Longer perineal length was associated with the presence of mother's menstrual cycle irregularities before pregnancy. Longer female perineal length has been related to excess androgen exposure in utero in rodent studies. Our findings may be consistent with previous studies in which an association between menstrual cycle irregularities and an excess of androgen has been reported, which therefore may result in a potential modification of the female offspring's reproductive tract during in-utero development, including perineal length. Copyright © 2013 Reproductive Healthcare Ltd. Published by Elsevier Ltd. All rights reserved.

Extended megadroughts in the southwestern United States during Pleistocene interglacials

USGS Publications Warehouse

Fawcett, P.J.; Werne, J.P.; Anderson, R. Scott; Heikoop, J.M.; Brown, E.T.; Berke, M.A.; Smith, S.J.; Goff, F.; Donohoo-Hurley, L.; Cisneros-Dozal, L. M.; Schouten, S.; Damste, J.S.S.; Huang, Y.; Toney, J.; Fessenden, J.; Woldegabriel, G.; Atudorei, V.; Geissman, J.W.; Allen, Craig D.

2011-01-01

The potential for increased drought frequency and severity linked to anthropogenic climate change in the semi-arid regions of the southwestern United States (US) is a serious concern. Multi-year droughts during the instrumental period and decadal-length droughts of the past two millennia were shorter and climatically different from the future permanent, ‘dust-bowl-like’ megadrought conditions, lasting decades to a century, that are predicted as a consequence of warming. So far, it has been unclear whether or not such megadroughts occurred in the southwestern US, and, if so, with what regularity and intensity. Here we show that periods of aridity lasting centuries to millennia occurred in the southwestern US during mid-Pleistocene interglacials. Using molecular palaeotemperature proxies to reconstruct the mean annual temperature (MAT) in mid-Pleistocene lacustrine sediment from the Valles Caldera, New Mexico, we found that the driest conditions occurred during the warmest phases of interglacials, when the MAT was comparable to or higher than the modern MAT. A collapse of drought-tolerant C4 plant communities during these warm, dry intervals indicates a significant reduction in summer precipitation, possibly in response to a poleward migration of the subtropical dry zone. Three MAT cycles ∼2 °C in amplitude occurred within Marine Isotope Stage (MIS) 11 and seem to correspond to the muted precessional cycles within this interglacial. In comparison with MIS 11, MIS 13 experienced higher precessional-cycle amplitudes, larger variations in MAT (4–6 °C) and a longer period of extended warmth, suggesting that local insolation variations were important to interglacial climatic variability in the southwestern US. Comparison of the early MIS 11 climate record with the Holocene record shows many similarities and implies that, in the absence of anthropogenic forcing, the region should be entering a cooler and wetter phase.

Evaluation of popliteal artery branching patterns and a new subclassification of the 'usual' branching pattern.

PubMed

Celtikci, Pinar; Ergun, Onur; Durmaz, Hasan Ali; Conkbayir, Isik; Hekimoglu, Baki

2017-09-01

To determine the frequency of popliteal artery branching variations in a wide study cohort and to investigate the relationship between these variations and infrapopliteal peripheral arterial disease (PAD). A subclassification was proposed for the most encountered type I-A, utilizing tibio-fibular trunk (TFT) length. A total number of 1184 lower extremity digital subtraction angiography (DSA) studies of 669 patients were evaluated. Following exclusion, 863 lower extremity DSA studies (431 right, 432 left) of 545 patients were enrolled. Popliteal artery branching type, patency of anterior tibial artery (ATA), fibular artery (FA) and posterior tibial artery (PTA) in each extremity and TFT length for type I-A extremities were recorded. Percentages of branching patterns, mean length and cut-off value of TFT and incidence of PAD in different types of branching were calculated. Type I-A was the most common type of branching (81.3%). Frequency of branching pattern variation was 18.7%, the most common variation category was category III (12.2%) and the most common variation type was type III-A (5.6%). ATA and PTA had higher percentages of PAD in extremities with variant branching types. Cut-off value of 3 cm for TFT length was proposed in order to subclassify type I-A. Our study cohort presents a higher incidence of popliteal artery branching variations. Some branching variations might have effect on the involvement pattern of the infrapopliteal arteries by PAD. We propose a subclassification for type I-A; type I-A-S (TFT < 3 cm) and type I-A-L (TFT ≥ 3 cm) which might have impact on interventional procedures.

Solar cycle variations of the solar wind

NASA Technical Reports Server (NTRS)

Crooker, N. U.

1983-01-01

Throughout the course of the past one and a half solar cycles, solar wind parameters measured near the ecliptic plane at 1 AU varied in the following way: speed and proton temperature have maxima during the declining phase and minima at solar minimum and are approximately anti-correlated with number density and electron temperature, while magnetic field magnitude and relative abundance of helium roughly follow the sunspot cycle. These variations are described in terms of the solar cycle variations of coronal holes, streamers, and transients. The solar wind signatures of the three features are discussed in turn, with special emphasis on the signature of transients, which is still in the process of being defined. It is proposed that magnetic clouds be identified with helium abundance enhancements and that they form the head of a transient surrounded by streamer like plasma, with an optional shock front. It is stressed that relative values of a parameter through a solar cycle should be compared beginning with the declining phase, especially in the case of magnetic field magnitude.

Helioseismic Observations of Two Solar Cycles and Constraints on Dynamo Theory

NASA Astrophysics Data System (ADS)

Kosovichev, Alexander

2018-01-01

Helioseismology data from the SOHO and SDO, obtained in 1996-2017 for almost two solar cycles, provide a unique opportunity to investigate variations of the solar interior structure and dynamics, and link these variations to the current dynamo models and simulations. The solar oscillation frequencies and frequency splitting of medium-degree p- and f-modes, as well as helioseismic inversions have been used to analyze variations of the differential rotation (“torsional oscillations”) and the global asphericity. By comparing the helioseismology results with the synoptic surface magnetic fields we identify characteristic changes associated the initiation and evolution of the solar cycles, 23 and 24. The observational results are compared with the current mean-field dynamo models and 3D MHD dynamo simulations. It is shown that the helioseismology inferences provide important constraints on the dynamics of the tachocline and near-surface shear layer, and also may explain the fundamental difference between the two solar cycles and detect the onset of the next cycle.

Implications of Extended Solar Minima

NASA Technical Reports Server (NTRS)

Adams, Mitzi L.; Davis, J. M.

2009-01-01

Since the discovery of periodicity in the solar cycle, the historical record of sunspot number has been carefully examined, attempting to make predictions about the next cycle. Much emphasis has been on predicting the maximum amplitude and length of the next cycle. Because current space-based and suborbital instruments are designed to study active phenomena, there is considerable interest in estimating the length and depth of the current minimum. We have developed criteria for the definition of a minimum and applied it to the historical sunspot record starting in 1749. In doing so, we find that 1) the current minimum is not yet unusually long and 2) there is no obvious way of predicting when, using our definition, the current minimum may end. However, by grouping the data into 22- year cycles there is an interesting pattern of extended minima that recurs every fourth or fifth 22-year cycle. A preliminary comparison of this pattern with other records, suggests the possibility of a correlation between extended minima and lower levels of solar irradiance.

Sonic hedgehog controls growth of external genitalia by regulating cell cycle kinetics

PubMed Central

Seifert, Ashley W.; Zheng, Zhengui; Ormerod, Brandi K.; Cohn, Martin J.

2010-01-01

During embryonic development, cells are instructed which position to occupy, they interpret these cues as differentiation programmes, and expand these patterns by growth. Sonic hedgehog (Shh) specifies positional identity in many organs; however, its role in growth is not well understood. In this study, we show that inactivation of Shh in external genitalia extends the cell cycle from 8.5 to 14.4 h, and genital growth is reduced by ∼75%. Transient Shh signalling establishes pattern in the genital tubercle; however, transcriptional levels of G1 cell cycle regulators are reduced. Consequently, G1 length is extended, leading to fewer progenitor cells entering S-phase. Cell cycle genes responded similarly to Shh inactivation in genitalia and limbs, suggesting that Shh may regulate growth by similar mechanisms in different organ systems. The finding that Shh regulates cell number by controlling the length of specific cell cycle phases identifies a novel mechanism by which Shh elaborates pattern during appendage development. PMID:20975695

Positive Feedback Keeps Duration of Mitosis Temporally Insulated from Upstream Cell-Cycle Events.

PubMed

Araujo, Ana Rita; Gelens, Lendert; Sheriff, Rahuman S M; Santos, Silvia D M

2016-10-20

Cell division is characterized by a sequence of events by which a cell gives rise to two daughter cells. Quantitative measurements of cell-cycle dynamics in single cells showed that despite variability in G1-, S-, and G2 phases, duration of mitosis is short and remarkably constant. Surprisingly, there is no correlation between cell-cycle length and mitotic duration, suggesting that mitosis is temporally insulated from variability in earlier cell-cycle phases. By combining live cell imaging and computational modeling, we showed that positive feedback is the molecular mechanism underlying the temporal insulation of mitosis. Perturbing positive feedback gave rise to a sluggish, variable entry and progression through mitosis and uncoupled duration of mitosis from variability in cell cycle length. We show that positive feedback is important to keep mitosis short, constant, and temporally insulated and anticipate it might be a commonly used regulatory strategy to create modularity in other biological systems. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

Upper limb load as a function of repetitive task parameters: part 1--a model of upper limb load.

PubMed

Roman-Liu, Danuta

2005-01-01

The aim of the study was to develop a theoretical indicator of upper limb musculoskeletal load based on repetitive task parameters. As such the dimensionless parameter, Integrated Cycle Load (ICL) was accepted. It expresses upper limb load which occurs during 1 cycle. The indicator is based on a model of a repetitive task, which consists of a model of the upper limb, a model of basic types of upper limb forces and a model of parameters of a repetitive task such as length of the cycle, length of periods of the cycle and external force exerted during each of the periods of the cycle. Calculations of the ICL parameter were performed for 12 different variants of external load characterised by different values of repetitive task parameters. A comparison of ICL, which expresses external load with a physiological indicator of upper limb load, is presented in Part 2 of the paper.

Menstrual cycle characteristics in fertile women from Greenland, Poland and Ukraine exposed to perfluorinated chemicals: a cross-sectional study.

PubMed

Lyngsø, J; Ramlau-Hansen, C H; Høyer, B B; Støvring, H; Bonde, J P; Jönsson, B A G; Lindh, C H; Pedersen, H S; Ludwicki, J K; Zviezdai, V; Toft, G

2014-02-01

Does perfluorooctane sulfonate (PFOS) and perfluorooctanate (PFOA) exposure disrupt the menstrual cyclicity? The female reproductive system may be sensitive to PFOA exposure, with longer menstrual cycle length at higher exposure. PFOS and PFOA are persistent man-made chemicals. Experimental animal studies suggest they are reproductive toxicants but epidemiological findings are inconsistent. A cross-sectional study including 1623 pregnant women from the INUENDO cohort enrolled during antenatal care visits between June 2002 and May 2004 in Greenland, Poland and Ukraine. Information on menstrual cycle characteristics was obtained by questionnaires together with a blood sample from each pregnant woman. Serum concentrations of PFOS and PFOA were measured by liquid chromatography tandem mass spectrometry. Multiple imputations were performed to account for missing data. The association between PFOS/PFOA and menstrual cycle length (short cycle: ≤24 days, long cycle: ≥32 days) and irregularities (≥7 days in difference between cycles) was analyzed using logistic regression with tertiles of exposure. Estimates are given as adjusted odds ratios (ORs) with 95% confidence intervals (CIs). Higher exposure levels of PFOA were associated with longer menstrual cycles in pooled estimates of all three countries. Compared with women in the lowest exposure tertile, the adjusted OR of long cycles was 1.8 (95% CI: 1.0; 3.3) among women in the highest tertile of PFOA exposure. No significant associations were observed between PFOS exposure and menstrual cycle characteristics. However, we observed a tendency toward more irregular cycles with higher exposure to PFOS [OR 1.7 (95% CI: 0.8; 3.5)]. The overall response rate was 45.3% with considerable variation between countries (91.3% in Greenland, 69.1% in Poland and 26.3% in Ukraine). Possible limitations in our study include varying participation rates across countries; a selected study group overrepresenting the most fertile part of the population; retrospective information on menstrual cycle characteristics; the determination of cut-points for all three outcome variables; and lacking information on some determinants of menstrual cycle characteristics, such as stress, physical activity, chronic diseases and gynecological disorders, thus confounding cannot be excluded. The generalizability of the study results is restricted to fertile women who manage to conceive and women who do not use oral contraceptives when getting pregnant or within 2 months before getting pregnant. To our knowledge only one previous epidemiological study has addressed the possible association between perfluorinated chemical exposure and menstrual disturbances. Though pointing toward different disturbances in cyclicity, both studies suggest that exposure to PFOA may affect the female reproductive function. This study contributes to the limited knowledge on effects of exposure to PFOA and PFOS on female reproductive function and suggests that the female reproductive system may be affected by environmental exposure to PFOA. Supported by a scholarship from Aarhus University Research Foundation. The collection of questionnaire data and blood samples was part of the INUENDO project supported by The European Commission (Contract no. QLK4-CT-2001-00 202), www.inuendo.dk. The Ukrainian part of the study was possible by a grant from INTAS (project 012 2205). Determination of PFOA and PFOS in serum was part of the CLEAR study (www.inuendo.dk/clear) supported by the European Commission's 7th Framework Program (FP7-ENV-2008-1-226217). No conflict of interest declared.

Does the intercept of the heat-stress relation provide an accurate estimate of cardiac activation heat?

PubMed

Pham, Toan; Tran, Kenneth; Mellor, Kimberley M; Hickey, Anthony; Power, Amelia; Ward, Marie-Louise; Taberner, Andrew; Han, June-Chiew; Loiselle, Denis

2017-07-15

The heat of activation of cardiac muscle reflects the metabolic cost of restoring ionic homeostasis following a contraction. The accuracy of its measurement depends critically on the abolition of crossbridge cycling. We abolished crossbridge activity in isolated rat ventricular trabeculae by use of blebbistatin, an agent that selectively inhibits myosin II ATPase. We found cardiac activation heat to be muscle length independent and to account for 15-20% of total heat production at body temperature. We conclude that it can be accurately estimated at minimal muscle length. Activation heat arises from two sources during the contraction of striated muscle. It reflects the metabolic expenditure associated with Ca 2+ pumping by the sarcoplasmic reticular Ca 2+ -ATPase and Ca 2+ translocation by the Na + /Ca 2+ exchanger coupled to the Na + ,K + -ATPase. In cardiac preparations, investigators are constrained in estimating its magnitude by reducing muscle length to the point where macroscopic twitch force vanishes. But this experimental protocol has been criticised since, at zero force, the observed heat may be contaminated by residual crossbridge cycling activity. To eliminate this concern, the putative thermal contribution from crossbridge cycling activity must be abolished, at least at minimal muscle length. We achieved this using blebbistatin, a selective inhibitor of myosin II ATPase. Using a microcalorimeter, we measured the force production and heat output, as functions of muscle length, of isolated rat trabeculae from both ventricles contracting isometrically at 5 Hz and at 37°C. In the presence of blebbistatin (15 μmol l -1 ), active force was zero but heat output remained constant, at all muscle lengths. Activation heat measured in the presence of blebbistatin was not different from that estimated from the intercept of the heat-stress relation in its absence. We thus reached two conclusions. First, activation heat is independent of muscle length. Second, residual crossbridge heat is negligible at zero active force; hence, the intercept of the cardiac heat-force relation provides an estimate of activation heat uncontaminated by crossbridge cycling. Both results resolve long-standing disputes in the literature. © 2017 The Authors. The Journal of Physiology © 2017 The Physiological Society.

Meridional Flow Variations in Cycles 23 and 24: Active Latitude Control of Sunspot Cycle Amplitudes

NASA Technical Reports Server (NTRS)

Hathaway, David H.; Upton, Lisa

2013-01-01

We have measured the meridional motions of magnetic elements observed in the photosphere over sunspot cycles 23 and 24 using magnetograms from SOHO/MDI and SDO/HMI. Our measurements confirm the finding of Komm, Howard, and Harvey (1993) that the poleward meridional flow weakens at cycle maxima. Our high spatial and temporal resolution analyses show that this variation is in the form of a superimposed inflow toward the active latitudes. This inflow is weaker in cycle 24 when compared to the inflow in 23, the stronger cycle. This systematic modulation of the meridional flow should also modulate the amplitude of the following sunspot cycle through its influence on the Sun's polar fields. The observational evidence and the theoretical consequences (similar to those of Cameron and Schussler (2012)) will be described.

Influence of lunar cycles on growth of Ashwagandha (Withania somnifera [L.] Dunal).

PubMed

Tavhare, Swagata D; Nishteswar, K; Shukla, Vinay J

2015-01-01

Ayurvedic classics have advocated to collect the medicinal plants according to part used and seasons in order to get desired pharmacological action and therapeutic benefits. The logic behind this principle is being validated by recent researches. To analyze the influence of lunar cycles on growth of Ashwagandha in Shishira and Greeshma Ritu (winter and summer season). Fourteen small crops of Ashwagandha of average size 10 cm were collected on October 7, 2013, from institute campus and then replantation was done at Charaka Herbal Garden, Gujarat Ayurved University, Jamnagar in an area of 60 cm × 60 cm (l × b). No fertilizers or pesticides were used. The plants were watered daily and plants were uprooted as per lunar cycles for analysis. Eight samples were collected and observed during Shishira and Greeshma season on Pournima (full moon) and Amavasya (new moon) days. The measurements were taken thrice and average values were taken into consideration for study purpose. The variations in morphological characteristics such as length, breadth, weight, and number of roots and twigs were studied through statistical procedure of principle component analysis, which makes interpretation of all possible related variables. Root weight (RW), pith diameter (PD) and internodal distance (ID) were found to be increased on full moon days as compared to new moon days. The maximum RW was observed during Greeshma Aashadha Pournima. The study has shown a definite influence of lunar cycles on the growth of the plant parts assessed by RW, PD, and ID that have found to be increased on full moon days as compared to new moon days.

Initial results from the NASA Lewis wave rotor experiment

NASA Technical Reports Server (NTRS)

Wilson, Jack; Fronek, Dennis

1993-01-01

Wave rotors may play a role as topping cycles for jet engines, since by their use, the combustion temperature can be raised without increasing the turbine inlet temperature. In order to design a wave rotor for this, or any other application, knowledge of the loss mechanisms is required, and also how the design parameters affect those losses. At NASA LeRC, a 3-port wave rotor experiment operating on the flow-divider cycle, has been started with the objective of determining the losses. The experimental scheme is a three factor Box-Behnken design, with passage opening time, friction factor, and leakage gap as the factors. Variation of these factors is provided by using two rotors, of different length, two different passage widths for each rotor, and adjustable leakage gap. In the experiment, pressure transducers are mounted on the rotor, and give pressure traces as a function of rotational angle at the entrance and exit of a rotor passage. In addition, pitot rakes monitor the stagnation pressures for each port, and orifice meters measure the mass flows. The results show that leakage losses are very significant in the present experiment, but can be reduced considerably by decreasing the rotor to wall clearance spacing.

Initial results from the NASA-Lewis wave rotor experiment

NASA Technical Reports Server (NTRS)

Wilson, Jack; Fronek, Dennis

1993-01-01

Wave rotors may play a role as topping cycles for jet engines, since by their use, the combustion temperature can be raised without increasing the turbine inlet temperature. In order to design a wave rotor for this, or any other application, knowledge of the loss mechanisms is required, and also how the design parameters affect those losses. At NASA LeRC, a 3-port wave rotor experiment operating on the flow-divider cycle, has been started with the objective of determining the losses. The experimental scheme is a three factor Box-Behnken design, with passage opening time, friction factor, and leakage gap as the factors. Variation of these factors is provided by using two rotors, of different length, two different passage widths for each rotor, and adjustable leakage gap. In the experiment, pressure transducers are mounted on the rotor, and give pressure traces as a function of rotational angle at the entrance and exit of a rotor passage. In addition, pitot rakes monitor the stagnation pressures for each port, and orifice meters measure the mass flows. The results show that leakage losses are very significant in the present experiment, but can be reduced considerably by decreasing the rotor to wall clearance spacing.

Decadal period external magnetic field variations determined via eigenanalysis

NASA Astrophysics Data System (ADS)

Shore, R. M.; Whaler, K. A.; Macmillan, S.; Beggan, C.; Velímský, J.; Olsen, N.

2016-06-01

We perform a reanalysis of hourly mean magnetic data from ground-based observatories spanning 1997-2009 inclusive, in order to isolate (after removal of core and crustal field estimates) the spatiotemporal morphology of the external fields important to mantle induction, on (long) periods of months to a full solar cycle. Our analysis focuses on geomagnetically quiet days and middle to low latitudes. We use the climatological eigenanalysis technique called empirical orthogonal functions (EOFs), which allows us to identify discrete spatiotemporal patterns with no a priori specification of their geometry -- the form of the decomposition is controlled by the data. We apply a spherical harmonic analysis to the EOF outputs in a joint inversion for internal and external coefficients. The results justify our assumption that the EOF procedure responds primarily to the long-period external inducing field contributions. Though we cannot determine uniquely the contributory source regions of these inducing fields, we find that they have distinct temporal characteristics which enable some inference of sources. An identified annual-period pattern appears to stem from a north-south seasonal motion of the background mean external field distribution. Separate patterns of semiannual and solar-cycle-length periods appear to stem from the amplitude modulations of spatially fixed background fields.

Evaluation of Vortex Chamber Concepts for Liquid Rocket Engine Applications

NASA Technical Reports Server (NTRS)

Trinh, Huu Phuoc; Knuth, Williams; Michaels, Scott; Turner, James E. (Technical Monitor)

2000-01-01

Rocket-based combined-cycle engines (RBBC) being considered at NASA for future generation launch vehicles feature clusters of small rocket thrusters as part of the engine components. Depending on specific RBBC concepts, these thrusters may be operated at various operating conditions including power level and/or propellant mixture ratio variations. To pursue technology developments for future launch vehicles, NASA/Marshall Space Flight Center (MSFC) is examining vortex chamber concepts for the subject cycle engine application. Past studies indicated that the vortex chamber schemes potentially have a number of advantages over conventional chamber methods. Due to the nature of the vortex flow, relatively cooler propellant streams tend to flow along the chamber wall. Hence, the thruster chamber can be operated without the need of any cooling techniques. This vortex flow also creates strong turbulence, which promotes the propellant mixing process. Consequently, the subject chamber concepts not only offer the system simplicity but they also would enhance the combustion performance. The test results showed that the chamber performance was markedly high even at a low chamber length-to- diameter ratio (L/D). This incentive can be translated to a convenience in the thrust chamber packaging.

No effect of embryo culture media on birthweight and length of newborns.

PubMed

Lin, Shengli; Li, Ming; Lian, Ying; Chen, Lixue; Liu, Ping

2013-07-01

Does the type of media used to culture embryos for IVF influence the birthweight and length of neonates? No significant differences were observed in birthweight and length among the three embryo culture media used for in vitro embryo culture. Since the establishment of IVF as an assisted reproductive technology (ART), many different culture systems have been used for the development of human embryos. Some studies have shown that the types of culture media influence the newborn birthweight; however, other studies have shown no effect. To further explore this contradictory issue, we compared the birthweight and length of neonates born after the transfer of embryos cultured in one of three commercially available media. This retrospective analysis of birthweight and length of newborns included 1201 women who delivered singletons and 445 women who delivered twins. The following three commercially available culture media were used: G5™, Global and Quinn's advantage media. Women who underwent IVF-ET cycles between 2008 and 2010 were analyzed. Patients younger than 40 years of age with a body mass index (BMI) <30 kg/m(2) were analyzed. Only data from singletons and twins born alive after the 20th week of gestation were included in the data analysis. Patients who received preimplantation genetic diagnosis (PGD) and donor oocytes were excluded. The analysis of 1201 singletons and 445 sets of twins showed no significant association between mean birthweight or mean birth length and the type of embryo culture medium. Inter-twin mean birthweight and length disparities were analyzed, but were not shown to be significantly different. Multiple linear regression analysis showed that maternal weight, maternal height, gestational age and infant gender were significantly related to birthweight, and paternal height, gestational age and newborn complications were significantly associated with birth length. The current study showed that birthweight and length of newborns were not associated with the embryo culture medium. More research needs to be performed to analyze the effects of other culture medium formulations and to evaluate the long-term effects of embryo culture medium on the health of children conceived through ART. WIDER IMPLICATIONS OF THESE FINDINGS: Our retrospective study suggests that embryo culture medium does not influence neonatal birthweight and length; however, the effects of culture medium on epigenetic variation of embryos need to be studied further.

Circadian Clock Synchronization of the Cell Cycle in Zebrafish Occurs through a Gating Mechanism Rather Than a Period-phase Locking Process.

PubMed

Laranjeiro, Ricardo; Tamai, T Katherine; Letton, William; Hamilton, Noémie; Whitmore, David

2018-04-01

Studies from a number of model systems have shown that the circadian clock controls expression of key cell cycle checkpoints, thus providing permissive or inhibitory windows in which specific cell cycle events can occur. However, a major question remains: Is the clock actually regulating the cell cycle through such a gating mechanism or, alternatively, is there a coupling process that controls the speed of cell cycle progression? Using our light-responsive zebrafish cell lines, we address this issue directly by synchronizing the cell cycle in culture simply by changing the entraining light-dark (LD) cycle in the incubator without the need for pharmacological intervention. Our results show that the cell cycle rapidly reentrains to a shifted LD cycle within 36 h, with changes in p21 expression and subsequent S phase timing occurring within the first few hours of resetting. Reentrainment of mitosis appears to lag S phase resetting by 1 circadian cycle. The range of entrainment of the zebrafish clock to differing LD cycles is large, from 16 to 32 hour periods. We exploited this feature to explore cell cycle entrainment at both the population and single cell levels. At the population level, cell cycle length is shortened or lengthened under corresponding T-cycles, suggesting that a 1:1 coupling mechanism is capable of either speeding up or slowing down the cell cycle. However, analysis at the single cell level reveals that this, in fact, is not true and that a gating mechanism is the fundamental method of timed cell cycle regulation in zebrafish. Cell cycle length at the single cell level is virtually unaltered with varying T-cycles.

Circadian Clock Synchronization of the Cell Cycle in Zebrafish Occurs through a Gating Mechanism Rather Than a Period-phase Locking Process

PubMed Central

Tamai, T. Katherine; Letton, William; Hamilton, Noémie; Whitmore, David

2018-01-01

Studies from a number of model systems have shown that the circadian clock controls expression of key cell cycle checkpoints, thus providing permissive or inhibitory windows in which specific cell cycle events can occur. However, a major question remains: Is the clock actually regulating the cell cycle through such a gating mechanism or, alternatively, is there a coupling process that controls the speed of cell cycle progression? Using our light-responsive zebrafish cell lines, we address this issue directly by synchronizing the cell cycle in culture simply by changing the entraining light-dark (LD) cycle in the incubator without the need for pharmacological intervention. Our results show that the cell cycle rapidly reentrains to a shifted LD cycle within 36 h, with changes in p21 expression and subsequent S phase timing occurring within the first few hours of resetting. Reentrainment of mitosis appears to lag S phase resetting by 1 circadian cycle. The range of entrainment of the zebrafish clock to differing LD cycles is large, from 16 to 32 hour periods. We exploited this feature to explore cell cycle entrainment at both the population and single cell levels. At the population level, cell cycle length is shortened or lengthened under corresponding T-cycles, suggesting that a 1:1 coupling mechanism is capable of either speeding up or slowing down the cell cycle. However, analysis at the single cell level reveals that this, in fact, is not true and that a gating mechanism is the fundamental method of timed cell cycle regulation in zebrafish. Cell cycle length at the single cell level is virtually unaltered with varying T-cycles. PMID:29444612

Variation in humpback whale (Megaptera novaeangliae) song length in relation to low-frequency sound broadcasts.

PubMed

Fristrup, Kurt M; Hatch, Leila T; Clark, Christopher W

2003-06-01

Humpback whale song lengths were measured from recordings made off the west coast of the island of Hawai'i in March 1998 in relation to acoustic broadcasts ("pings") from the U.S. Navy SURTASS Low Frequency Active sonar system. Generalized additive models were used to investigate the relationships between song length and time of year, time of day, and broadcast factors. There were significant seasonal and diurnal effects. The seasonal factor was associated with changes in the density of whales sighted near shore. The diurnal factor was associated with changes in surface social activity. Songs that ended within a few minutes of the most recent ping tended to be longer than songs sung during control periods. Many songs that were overlapped by pings, and songs that ended several minutes after the most recent ping, did not differ from songs sung in control periods. The longest songs were sung between 1 and 2 h after the last ping. Humpbacks responded to louder broadcasts with longer songs. The fraction of variation in song length that could be attributed to broadcast factors was low. Much of the variation in humpback song length remains unexplained.

Variation in humpback whale (Megaptera novaeangliae) song length in relation to low-frequency sound broadcasts

NASA Astrophysics Data System (ADS)

Fristrup, Kurt M.; Hatch, Leila T.; Clark, Christopher W.

2003-06-01

Humpback whale song lengths were measured from recordings made off the west coast of the island of Hawai'i in March 1998 in relation to acoustic broadcasts (``pings'') from the U.S. Navy SURTASS Low Frequency Active sonar system. Generalized additive models were used to investigate the relationships between song length and time of year, time of day, and broadcast factors. There were significant seasonal and diurnal effects. The seasonal factor was associated with changes in the density of whales sighted near shore. The diurnal factor was associated with changes in surface social activity. Songs that ended within a few minutes of the most recent ping tended to be longer than songs sung during control periods. Many songs that were overlapped by pings, and songs that ended several minutes after the most recent ping, did not differ from songs sung in control periods. The longest songs were sung between 1 and 2 h after the last ping. Humpbacks responded to louder broadcasts with longer songs. The fraction of variation in song length that could be attributed to broadcast factors was low. Much of the variation in humpback song length remains unexplained.

Earthquake triggering, Earth's rotation variations, Meton's cycle and torques acting on the Earth.

NASA Astrophysics Data System (ADS)

Ostrihansky, L.

2012-04-01

In contrast to unsuccessful searching (lasting over 150 years) of correlation of earthquakes with biweekly tides the author found correlation of earthquakes with sidereal 13.66 days Earth's rotation variations expressed as the length of a day (LOD) measured daily by the International Earth's Rotation Service. After short mention about earthquakes Denali Fault Alaska 3rd November 2002, M 7.9, triggered on LOD maximum and Great Sumatra earthquake 26th December 2004 triggered on LOD minimum and the full Moon, the main object of this paper are earthquakes of period 2010-VI. 2011: Haiti M 7.0 Jan. 12, 2010 on LOD minimum, Maule Chile M 8.8 Feb. 12, 2010 on LOD maximum, Sumatra and Andaman Sea region 6 earthquakes revealed from 7 on LOD minimum, New Zealand, Christchurch M 7.1 Sep. 9, 2010 on LOD minimum and Christchurch M 6.3 Feb. 21, 2011 on LOD maximum and Japan Near coast of Honshu M 9.1 March 11, 2011 on LOD minimum. I found that LOD minimums coincide with full or new Moon only twice in a year in solstices and also twice in the year with LOD maximums in equinoxes. To prove that determined coincidences of earthquakes and LOD extremes stated above are not accidental events, histograms were constructed of earthquake occurrence and their position on LOD graph deeply in the past, in some cases from the time the IERS started to measure the Earth's rotation variations in 1962. Evaluation of histograms and the Schuster's test has proven that maxima of earthquakes are triggered always in both Earth's rotation deceleration and acceleration. Backward overview of the past earthquakes revealed that the Great Sumatra earthquake Dec. 26, 2004 had its equivalent in the shape of LOD graph, full Moon position, character of aftershocks, 19 years ago in difference only one day of Dec. 27, 1985 M 6.6, proving that not only sidereal 13.66 days variations but also the 19 years Meton's cycle is the period of the earthquakes occurrence.

Axial length variation impacts on retinal vessel density and foveal avascular zone area measurement using optical coherence tomography angiography

NASA Astrophysics Data System (ADS)

Sampson, Danuta M.; Gong, Peijun; An, Di; Menghini, Moreno; Hansen, Alex; Mackey, David A.; Sampson, David D.; Chen, Fred K.

2017-04-01

We examined the impact of axial length on superficial retinal vessel density (SRVD) and foveal avascular zone area (FAZA) measurement using optical coherence tomography angiography. The SRVD and FAZA were quantified before and after correction for magnification error associated with axial length variation. Although SRVD did not differ before and after correction for magnification error in the parafoveal region, change in foveal SRVD and FAZA were significant. This has implications for clinical trials outcome in diseased eyes where significant capillary dropout may occur in the parafovea.

Nonlinear pyroelectric energy harvesting from relaxor single crystals.

PubMed

Khodayari, Akram; Pruvost, Sebastien; Sebald, Gael; Guyomar, Daniel; Mohammadi, Saber

2009-04-01

Energy harvesting from temperature variations in a Pb(Zn(1/3)Nb(2/3))(0.955)Ti(0.045)O(3) single crystal was studied and evaluated using the Ericsson thermodynamic cycle. The efficiency of this cycle related to Carnot cycle is 100 times higher than direct pyroelectric energy harvesting, and it can be as high as 5.5% for a 10 degrees C temperature variation and 2 kV/mm electric field. The amount of harvested energy for a 60 degrees C temperature variation and 2 kV/mm electric field is 242.7 mJ x cm(-3). The influence of ferroelectric phase transitions on the energy harvesting performance is discussed and illustrated with experimental results.

The Prediction of Length-of-day Variations Based on Gaussian Processes

NASA Astrophysics Data System (ADS)

Lei, Y.; Zhao, D. N.; Gao, Y. P.; Cai, H. B.

2015-01-01

Due to the complicated time-varying characteristics of the length-of-day (LOD) variations, the accuracies of traditional strategies for the prediction of the LOD variations such as the least squares extrapolation model, the time-series analysis model, and so on, have not met the requirements for real-time and high-precision applications. In this paper, a new machine learning algorithm --- the Gaussian process (GP) model is employed to forecast the LOD variations. Its prediction precisions are analyzed and compared with those of the back propagation neural networks (BPNN), general regression neural networks (GRNN) models, and the Earth Orientation Parameters Prediction Comparison Campaign (EOP PCC). The results demonstrate that the application of the GP model to the prediction of the LOD variations is efficient and feasible.

Intraspecific divergence in sperm morphology of the green sea urchin, Strongylocentrotus droebachiensis: implications for selection in broadcast spawners

PubMed Central

2008-01-01

Background Sperm morphology can be highly variable among species, but less is known about patterns of population differentiation within species. Most studies of sperm morphometric variation are done in species with internal fertilization, where sexual selection can be mediated by complex mating behavior and the environment of the female reproductive tract. Far less is known about patterns of sperm evolution in broadcast spawners, where reproductive dynamics are largely carried out at the gametic level. We investigated variation in sperm morphology of a broadcast spawner, the green sea urchin (Strongylocentrotus droebachiensis), within and among spawnings of an individual, among individuals within a population, and among populations. We also examined population-level variation between two reproductive seasons for one population. We then compared among-population quantitative genetic divergence (QST) for sperm characters to divergence at neutral microsatellite markers (FST). Results All sperm traits except total length showed strong patterns of high diversity among populations, as did overall sperm morphology quantified using multivariate analysis. We also found significant differences in almost all traits among individuals in all populations. Head length, axoneme length, and total length had high within-male repeatability across multiple spawnings. Only sperm head width had significant within-population variation across two reproductive seasons. We found signatures of directional selection on head length and head width, with strong selection possibly acting on head length between the Pacific and West Atlantic populations. We also discuss the strengths and limitations of the QST-FST comparison. Conclusion Sperm morphology in S. droebachiensis is highly variable, both among populations and among individuals within populations, and has low variation within an individual across multiple spawnings. Selective pressures acting among populations may differ from those acting within, with directional selection implicated in driving divergence among populations and balancing selection as a possible mechanism for producing variability among males. Sexual selection in broadcast spawners may be mediated by different processes from those acting on internal fertilizers. Selective divergence in sperm head length among populations is associated with ecological differences among populations that may play a large role in mediating sexual selection in this broadcast spawner. PMID:18851755

Running rescues defective adult neurogenesis by shortening the length of the cell cycle of neural stem and progenitor cells.

PubMed

Farioli-Vecchioli, Stefano; Mattera, Andrea; Micheli, Laura; Ceccarelli, Manuela; Leonardi, Luca; Saraulli, Daniele; Costanzi, Marco; Cestari, Vincenzo; Rouault, Jean-Pierre; Tirone, Felice

2014-07-01

Physical exercise increases the generation of new neurons in adult neurogenesis. However, only few studies have investigated the beneficial effects of physical exercise in paradigms of impaired neurogenesis. Here, we demonstrate that running fully reverses the deficient adult neurogenesis within the hippocampus and subventricular zone of the lateral ventricle, observed in mice lacking the antiproliferative gene Btg1. We also evaluated for the first time how running influences the cell cycle kinetics of stem and precursor subpopulations of wild-type and Btg1-null mice, using a new method to determine the cell cycle length. Our data show that in wild-type mice running leads to a cell cycle shortening only of NeuroD1-positive progenitor cells. In contrast, in Btg1-null mice, physical exercise fully reactivates the defective hippocampal neurogenesis, by shortening the S-phase length and the overall cell cycle duration of both neural stem (glial fibrillary acidic protein(+) and Sox2(+)) and progenitor (NeuroD1(+)) cells. These events are sufficient and necessary to reactivate the hyperproliferation observed in Btg1-null early-postnatal mice and to expand the pool of adult neural stem and progenitor cells. Such a sustained increase of cell proliferation in Btg1-null mice after running provides a long-lasting increment of proliferation, differentiation, and production of newborn neurons, which rescues the impaired pattern separation previously identified in Btg1-null mice. This study shows that running positively affects the cell cycle kinetics of specific subpopulations of newly generated neurons and suggests that the plasticity of neural stem cells without cell cycle inhibitory control is reactivated by running, with implications for the long-term modulation of neurogenesis. © 2014 AlphaMed Press.

Intrinsic Variability in Shell and Soft Tissue Growth of the Freshwater Mussel Lampsilis siliquoidea

PubMed Central

Larson, James H.; Eckert, Nathan L.; Bartsch, Michelle R.

2014-01-01

Freshwater mussels are ecologically and economically important members of many aquatic ecosystems, but are globally among the most imperiled taxa. Propagation techniques for mussels have been developed and used to boost declining and restore extirpated populations. Here we use a cohort of propagated mussels to estimate the intrinsic variability in size and growth rate of Lampsilis siliquoidea (a commonly propagated species). Understanding the magnitude and pattern of variation in data is critical to determining whether effects observed in nature or experimental treatments are likely to be important. The coefficient of variation (CV) of L. siliquoidea soft tissues (6.0%) was less than the CV of linear shell dimensions (25.1–66.9%). Size-weight relationships were best when mussel width (the maximum left-right dimension with both valves appressed) was used as a predictor, but 95% credible intervals on these predictions for soft tissues were ∼145 mg wide (about 50% of the mean soft tissue mass). Mussels in this study were treated identically, raised from a single cohort and yet variation in soft tissue mass at a particular size class (as determined by shell dimensions) was still high. High variability in mussel size is often acknowledged, but seldom discussed in the context of mussel conservation. High variability will influence the survival of stocked juvenile cohorts, may affect the ability to experimentally detect sublethal stressors and may lead to incongruities between the effects that mussels have on structure (via hard shells) and biogeochemical cycles (via soft tissue metabolism). Given their imperiled status and longevity, there is often reluctance to destructively sample unionid mussel soft tissues even in metabolic studies (e.g., studies of nutrient cycling). High intrinsic variability suggests that using shell dimensions (particularly shell length) as a response variable in studies of sublethal stressors or metabolic processes will make confident identifications of smaller effect sizes difficult. PMID:25411848

Intrinsic variability in shell and soft tissue growth of the freshwater mussel Lampsilis siliquoidea

USGS Publications Warehouse

Larson, James H.; Eckert, Nathan L.; Bartsch, Michelle

2014-01-01

Freshwater mussels are ecologically and economically important members of many aquatic ecosystems, but are globally among the most imperiled taxa. Propagation techniques for mussels have been developed and used to boost declining and restore extirpated populations. Here we use a cohort of propagated mussels to estimate the intrinsic variability in size and growth rate of Lampsilis siliquoidea (a commonly propagated species). Understanding the magnitude and pattern of variation in data is critical to determining whether effects observed in nature or experimental treatments are likely to be important. The coefficient of variation (CV) of L. siliquoidea soft tissues (6.0%) was less than the CV of linear shell dimensions (25.1-66.9%). Size-weight relationships were best when mussel width (the maximum left-right dimension with both valves appressed) was used as a predictor, but 95% credible intervals on these predictions for soft tissues were ~145 mg wide (about 50% of the mean soft tissue mass). Mussels in this study were treated identically, raised from a single cohort and yet variation in soft tissue mass at a particular size class (as determined by shell dimensions) was still high. High variability in mussel size is often acknowledged, but seldom discussed in the context of mussel conservation. High variability will influence the survival of stocked juvenile cohorts, may affect the ability to experimentally detect sublethal stressors and may lead to incongruities between the effects that mussels have on structure (via hard shells) and biogeochemical cycles (via soft tissue metabolism). Given their imperiled status and longevity, there is often reluctance to destructively sample unionid mussel soft tissues even in metabolic studies (e.g., studies of nutrient cycling). High intrinsic variability suggests that using shell dimensions (particularly shell length) as a response variable in studies of sublethal stressors or metabolic processes will make confident identifications of smaller effect sizes difficult.

Telomere length variation: A potential new telomere biomarker for lung cancer risk

PubMed Central

Sun, Bing; Wang, Ying; Kota, Krishna; Shi, Yaru; Motlak, Salaam; Makambi, Kepher; Loffredo, Christopher A.; Shields, Peter G.; Yang, Qin; Harris, Curtis C.; Zheng, Yun-Ling

2015-01-01

Objectives In this report the associations between telomere length variation (TLV), mean telomere length in blood lymphocytes and lung cancer risk were examined. Materials and Methods The study design is case-control. Cases (N = 191) were patients newly diagnosed with histologically confirmed non-small cell lung cancer. Controls (N = 207) were healthy individuals recruited from the same counties as cases and matched to cases on age and gender. Telomere fluorescent in situ hybridization was used to measure telomere features using short-term cultured blood lymphocytes. Logistic regression was used to estimate the strength of association between telomere features and lung cancer risk. Results Telomere length variation across all chromosomal ends was significantly associated with lung cancer risk; adjusted odds ratios 4.67 [95% confidence interval (CI): 1.46 – 14.9] and 0.46 (95% CI: 0.25 – 0.84) for younger (age ≤ 60) and older (age > 60) individuals, respectively. TLV and mean telomere length jointly affected lung cancer risk: when comparing individuals with short telomere length and high TLV to those with long telomere length and low TLV, adjusted odd ratios were 8.21 (95% CI: 1.71 – 39.5) and 0.33 (95% CI: 0.15 – 0.72) for younger and older individuals, respectively. Conclusions TLV in blood lymphocytes is significantly associated with lung cancer risk and the associations were modulated by age. TLV in combination with mean telomere length might be useful in identifying high risk population for lung cancer computerized tomography screening. PMID:25840848

Shaping the shoot: the relative contribution of cell number and cell shape to variations in internode length between parent and hybrid apple trees.

PubMed

Ripetti, V; Escoute, J; Verdeil, J L; Costes, E

2008-01-01

Genetic control of plant size and shape is a promising perspective, particularly in fruit trees, in order to select desirable genotypes. A recent study on architectural traits in an apple progeny showed that internode length was a highly heritable character. However, few studies have been devoted to internode cellular patterning in dicotyledonous stems, and the interplay between the two elementary cell processes that contribute to their length, i.e. cell division and elongation, is not fully understood. The present study aimed at unravelling their contributions in the genetic variation of internode length in a selection of F(1) and parent genotypes of apple tree, by exploring the number of cells and cell shape within mature internodes belonging to the main axes. The results highlighted that both the variables were homogeneous in samples collected either along a sagital line or along the pith width, and suggest that cell lengthening was homogeneous during internode development. They allowed the total number of cells to be estimated on the internode scale and opened up new perspectives for simplifying tissue sampling procedures for further investigations. Differences in internode length were observed between the genotypes, in particular between the parents, and partly resulted from a compensation between cell number and cell length. However, genetic variations in internode length primarily involved the number of cells, while cell length was more secondary. These results argue for an interplay between cellular and organismal control of internode shape that may involve the rib meristem.

42 years of continuous observations of the Solar 1 diameter from 1974 to 2015 - What do they forecast.

NASA Astrophysics Data System (ADS)

Humberto Andrei, Alexandre; Penna, Jucira; Boscardin, Sergio; Papa, Andres R. R.; Garcia, Marcos Antonio; Sigismondi, Costantino

2016-07-01

Several research groups in the world developed observational programs for the Sun in order to measure its apparent diameter over time with dedicated instruments, called solar astrolabes, since 1974. Their data have been gathered in several observing stations connected in the R2S3 (Réseau de Suivi au Sol du Rayon Solaire) network and through reciprocal visits and exchanges: Nice/Calern Observatoire/France, Rio de Janeiro Observatório Nacional/Brazil, Observatório de São Paulo IAGUSP/Brazil, Observatório Abrahão de Moraes IAGUSP/Brazil, Antalya Observatory/Turkey, San Fernando/Spain. Since all the optics and data treatment of the solar astrolabes was the same, from the oldest, with a single fixed objective prism, to the newest, with an angle variable objective prism and digital image acquisition, their results could be put together. Each instrument had its own density filter with a prismatic effect responsible for a particular shift. Thus, identical data gathering and just a different prismatic shift, enabled to reconcile all those series by using the common stretches and derive a single additive constant to place each one onto a common average. By doing so, although the value itself of the ground observed solar diameter is lost, its variations are determined over 35 years. On the combined series of the ground observed solar diameter a modulation with the 11 years main solar cycle is evident. However when such modulation is removed, both from the solar diameter compound series and from the solar activity series (as given by the sunspots count), a very strong anticorrelation is revealed. This suggested a larger diameter for the forthcoming cycles. This was very well verified for solar cycle 23, and correctly forecasted for cycle 24,in a behavior similar to that on the Minima of Dalton and Maunder. The ground monitoring keeps being routinely followed at Observatório Nacional in Rio de Janeiro, now using the Solar Heliometer, specially built to this end . The Heliometer has the same focal length and aperture of the earlier solar astrolabes, and the diameter determination uses the same physical and mathematical definition of the solar limb. Therefore the same robust, no-hypothesis, simple combination by an adding constant, can be used to include the Heliometer measurements along the previous long, continuous series. As a result the series of measurements of the variation of the solar diameter reaches 42 years, and covers also the solar cycle 24. In this paper we review all the individual series chief elements, as well as the calculation and values of the adding constants. We show the earlier comparison that lead to an anticorrelation at 0.867 to the solar activity record, when the 11 years modulation is expurgate, and exhibits an impressively accurate description of cycle 23. On the strength of such successful analysis we employ the new longer series to discuss the current solar cycle 24 and forecast for the following solar cycle 25. We thus advocate in favor of continued and continuous ground measurements of the solar diameter, on the usefulness of making these results available to the scientific community at large, and on the matter-of-fact, real variations of the solar diameter on long term time periods and/or local places on the Sun, in this case possibly associated to major magnetism driven solar transients.

Round-Trip System Available to Measure Path Length Variation in Korea VLBI System for Geodesy

NASA Technical Reports Server (NTRS)

Oh, Hongjong; Kondo, Tetsuro; Lee, Jinoo; Kim, Tuhwan; Kim, Myungho; Kim, Suchul; Park, Jinsik; Ju, Hyunhee

2010-01-01

The construction project of Korea Geodetic VLBI officially started in October 2008. The construction of all systems will be completed by the end of 2011. The project was named Korea VLBI system for Geodesy (KVG), and its main purpose is to maintain the Korea Geodetic Datum. In case of the KVG system, an observation room with an H-maser frequency standard is located in a building separated from the antenna by several tens of meters. Therefore KVG system will adopt a so-called round-trip system to transmit reference signals to the antenna with reduction of the effect of path length variations. KVG s round-trip system is designed not only to use either metal or optical fiber cables, but also to measure path length variations directly. We present this unique round trip system for KVG.

Sexual dimorphism of head morphology in three-spined stickleback Gasterosteus aculeatus.

PubMed

Aguirre, W E; Akinpelu, O

2010-09-01

This study examined sexual dimorphism of head morphology in the ecologically diverse three-spined stickleback Gasterosteus aculeatus. Male G. aculeatus had longer heads than female G. aculeatus in all 10 anadromous, stream and lake populations examined, and head length growth rates were significantly higher in males in half of the populations sampled, indicating that differences in head size increased with body size in many populations. Despite consistently larger heads in males, there was significant variation in size-adjusted head length among populations, suggesting that the relationship between head length and body length was flexible. Inter-population differences in head length were correlated between sexes, thus population-level factors influenced head length in both sexes despite the sexual dimorphism present. Head shape variation between lake and anadromous populations was greater than that between sexes. The common divergence in head shape between sexes across populations was about twice as important as the sexual dimorphism unique to each population. Finally, much of the sexual dimorphism in head length was due to divergence in the anterior region of the head, where the primary trophic structures were found. It is unclear whether the sexual dimorphism was due to natural selection for niche divergence between sexes or sexual selection. This study improves knowledge of the magnitude, growth rate divergence, inter-population variation and location of sexual dimorphism in G. aculeatus head morphology. © 2010 The Authors. Journal compilation © 2010 The Fisheries Society of the British Isles.

Synchronous monitoring of muscle dynamics and muscle force for maximum isometric tetanus

NASA Astrophysics Data System (ADS)

Zakir Hossain, M.; Grill, Wolfgang

2010-03-01

Skeletal muscle is a classic example of a biological soft matter . At both macro and microscopic levels, skeletal muscle is exquisitely oriented for force generation and movement. In addition to the dynamics of contracting and relaxing muscle which can be monitored with ultrasound, variations in the muscle force are also expected to be monitored. To observe such force and sideways expansion variations synchronously for the skeletal muscle a novel detection scheme has been developed. As already introduced for the detection of sideways expansion variations of the muscle, ultrasonic transducers are mounted sideways on opposing positions of the monitored muscle. To detect variations of the muscle force, angle of pull of the monitored muscle has been restricted by the mechanical pull of the sonic force sensor. Under this condition, any variation in the time-of-flight (TOF) of the transmitted ultrasonic signals can be introduced by the variation of the path length between the transducers. The observed variations of the TOF are compared to the signals obtained by ultrasound monitoring for the muscle dynamics. The general behavior of the muscle dynamics and muscle force shows almost an identical concept. Since muscle force also relates the psychological boosting-up effects, the influence of boosting-up on muscle force and muscle dynamics can also be quantified form this study. Length-tension or force-length and force-velocity relationship can also be derived quantitatively with such monitoring.

The climate of Mars

NASA Astrophysics Data System (ADS)

Haberle, R. M.

1986-05-01

The composition of the primitive Martian atmosphere and its development into the present environment are described. The primitive atmosphere consisted of water vapor, carbon dioxide, and nitrogen released from rocks; the greenhouse effect which maintained the surface temperature above the frost point of water is examined. Volcanic activity reduced the greenhouse effect and along with CO2 removal from the atmosphere caused a lowering of the planet temperature. The global circulation patterns on earth and Mars are compared; the similarities in the circulation patterns and Mars' seasonal variations are studied. The carbon dioxide and water cycles on Mars are analyzed; the carbon dioxide cycle determines seasonal variations in surface pressure and the behavior of the water cycle. The behavior of the atmospheric dust and the relationship between the seasonal dust cycle and Hadley circulation are investigated. The periodic variations in the three orbital parameters of Mars, which affect the climate by changing the seasonal and latitudinal distribution of incoming solar energy are discussed

Magnetic activity of red secondaries: clues from the outburst cycle variations of dwarf novae

NASA Astrophysics Data System (ADS)

Chinarova, L. L.

Photometric variations of 6 dwarf novae stars are studied based on the photographic observations from the Odessa, Moscow and Sonneberg plate collections and published visual monitoring data from the AFOEV database (Schweitzer E.: 1993, Bull. AFOEV, 64, 14). The moments of maxima are determined by using the "running parabola" fit (Andronov I.L., 1990, Kinematika Fizika Nebesn. Tel., v.6,,N 6, 87) with automatically determined filter half-width (Andronov I.L., 1997, As.Ap. Suppl., in press). All investigated stars exhibit significant changes not only from cycle-to-cycle, but from season-to-season as well. Secondary decade-scale cycles of smooth variations (Bianchini A., 1990, AJ 99, 1941) and abrupt switchings (Andronov I.L., Shakun L.I., 1990, ASS 169, 237) were interpreted by a solar-type activity of the red dwarf secondary in a binary system and may argue for existence of two different subgroups of the dwarf novae.

A Different View of Solar Spectral Irradiance Variations: Modeling Total Energy over Six-Month Intervals.

PubMed

Woods, Thomas N; Snow, Martin; Harder, Jerald; Chapman, Gary; Cookson, Angela

A different approach to studying solar spectral irradiance (SSI) variations, without the need for long-term (multi-year) instrument degradation corrections, is examining the total energy of the irradiance variation during 6-month periods. This duration is selected because a solar active region typically appears suddenly and then takes 5 to 7 months to decay and disperse back into the quiet-Sun network. The solar outburst energy, which is defined as the irradiance integrated over the 6-month period and thus includes the energy from all phases of active region evolution, could be considered the primary cause for the irradiance variations. Because solar cycle variation is the consequence of multiple active region outbursts, understanding the energy spectral variation may provide a reasonable estimate of the variations for the 11-year solar activity cycle. The moderate-term (6-month) variations from the Solar Radiation and Climate Experiment (SORCE) instruments can be decomposed into positive (in-phase with solar cycle) and negative (out-of-phase) contributions by modeling the variations using the San Fernando Observatory (SFO) facular excess and sunspot deficit proxies, respectively. These excess and deficit variations are fit over 6-month intervals every 2 months over the mission, and these fitted variations are then integrated over time for the 6-month energy. The dominant component indicates which wavelengths are in-phase and which are out-of-phase with solar activity. The results from this study indicate out-of-phase variations for the 1400 - 1600 nm range, with all other wavelengths having in-phase variations.

Persistent organochlorine pollutants and menstrual cycle characteristics

PubMed Central

Buck Louis, Germaine M.; Rios, Lisbeth Iglesias; McLain, Alexander; Cooney, Maureen A.; Kostyniak, Paul J.; Sundaram, Rajeshwari

2014-01-01

An evolving body of evidence suggests an adverse relation between persistent organochlorine pollutants (POPs) and menstruation, though prospective longitudinal measurement of menses is limited and served as the impetus for study. We prospectively assessed the relation between a mixture of persistent organochlorine compounds and menstrual cycle length and duration of bleeding in a cohort of women attempting to become pregnant. Eighty-three (83%) women contributing 447 cycles for analysis provided a blood specimen for the quantification of 76 polychlorinated biphenyls and seven organochlorine pesticides, and completed daily diaries on menstruation until a human chorionic gonadotropin confirmed pregnancy or 12 menstrual cycles without conception. Gas chromatography with electron capture detection was used to quantify concentrations (ng g−1 serum); enzymatic methods were used to quantify serum lipids (mg dL−1). A linear regression model with a mixture distribution was used to identify chemicals grouped by purported biologic activity that significantly affected menstrual cycle length and duration of bleeding adjusting for age at menarche and enrollment, body mass index, and cigarette smoking. A significant 3-d increase in cycle length was observed for women in the highest tertile of estrogenic PCB congeners relative to the lowest tertile (β = 3.20; 95% CI 0.36, 6.04). A significant reduction in bleeding (<1 d) was observed among women in the highest versus lowest tertile of aromatic fungicide exposure (γ = −0.15; 95% CI −0.29, −0.00). Select POPs were associated with changes in menstruation underscoring the importance of assessing chemical mixtures for female fecundity. PMID:22018858

The key kinematic determinants of undulatory underwater swimming at maximal velocity.

PubMed

Connaboy, Chris; Naemi, Roozbeh; Brown, Susan; Psycharakis, Stelios; McCabe, Carla; Coleman, Simon; Sanders, Ross

2016-01-01

The optimisation of undulatory underwater swimming is highly important in competitive swimming performance. Nineteen kinematic variables were identified from previous research undertaken to assess undulatory underwater swimming performance. The purpose of the present study was to determine which kinematic variables were key to the production of maximal undulatory underwater swimming velocity. Kinematic data at maximal undulatory underwater swimming velocity were collected from 17 skilled swimmers. A series of separate backward-elimination analysis of covariance models was produced with cycle frequency and cycle length as dependent variables (DVs) and participant as a fixed factor, as including cycle frequency and cycle length would explain 100% of the maximal swimming velocity variance. The covariates identified in the cycle-frequency and cycle-length models were used to form the saturated model for maximal swimming velocity. The final parsimonious model identified three covariates (maximal knee joint angular velocity, maximal ankle angular velocity and knee range of movement) as determinants of the variance in maximal swimming velocity (adjusted-r2 = 0.929). However, when participant was removed as a fixed factor there was a large reduction in explained variance (adjusted r2 = 0.397) and only maximal knee joint angular velocity continued to contribute significantly, highlighting its importance to the production of maximal swimming velocity. The reduction in explained variance suggests an emphasis on inter-individual differences in undulatory underwater swimming technique and/or anthropometry. Future research should examine the efficacy of other anthropometric, kinematic and coordination variables to better understand the production of maximal swimming velocity and consider the importance of individual undulatory underwater swimming techniques when interpreting the data.

Aerobic Exercise, Estrogens, and Breast Cancer Risk

DTIC Science & Technology

2011-11-01

on endogenous sex hormone levels, menstrual cycle characteristics, and estrogen metabolism in sedentary, eumenorrheic, healthy premenopausal women...changes in menstrual cycle length, and 4) limited changes in estrogen metabolism. The resulting increases in urinary 2-hydroxyestrone levels and 2...effects of a 16-week, aerobic exercise intervention on endogenous sex hormone levels, menstrual cycle characteristics, and estrogen metabolism of young

Low-angle dunes in the Changjiang (Yangtze) Estuary: Flow and sediment dynamics under tidal influence

NASA Astrophysics Data System (ADS)

Hu, Hao; Wei, Taoyuan; Yang, Zhongyong; Hackney, Christopher R.; Parsons, Daniel R.

2018-05-01

It has long been highlighted that important feedbacks exist between river bed morphology, sediment transport and the turbulent flow field and that these feedbacks change in response to forcing mechanisms. However, our current understanding of bedform dynamics is largely based on studies of steady flow environments and cohesionless bed conditions. Few investigations have been made under rapidly changing flows. Here, we examine flow and sediment dynamics over low-angle dunes in unsteady flows in the Changjiang (Yangtze) Estuary, China. Topography, flow and sediment data were collected over a reach ca 1.8 km long through a semi-diurnal tidal cycle in a moderate tide of flood season. The results show that: (1) roughness length derived from the upper flow changes little with the flow reversing and displays the same value on both the ebb and flood tide. Moreover, the variability of individual bedform features plays an important role in roughness length variation. (2) Shear stress over the crest of low-angle dunes roughly represents the total spatially averaged stress over dunes in this study area, which has significant implications for advancing numerical models. (3) Changes in morphology, flow and sediment dynamics over dunes through time reveal how low-angle dunes evolve within a tidal cycle. (4) The clockwise hysteresis loops between flow dynamics and bedform features (height and aspect ratio) are also observed. The combination of suspended sediment transport and bedload transport on dune transformation and migration attributes to the clockwise hysteresis. The specific sediment composition of the riverbed, in some extent, affects the mechanism of sediment transport related to the exchange between suspended sediment and riverbed, but further investigation is needed to figure out the mechanism behind this for extended series of tides, such as spring/neap tide and tides in flooding and dry season.

Astrometric Calibration and Performance of the Dark Energy Camera

DOE PAGES

Bernstein, G. M.; Armstrong, R.; Plazas, A. A.; ...

2017-05-30

We characterize the ability of the Dark Energy Camera (DECam) to perform relative astrometry across its 500 Mpix, 3more » $deg^2$ science field of view, and across 4 years of operation. This is done using internal comparisons of $~ 4 x 10^7$ measurements of high-S/N stellar images obtained in repeat visits to fields of moderate stellar density, with the telescope dithered to move the sources around the array. An empirical astrometric model includes terms for: optical distortions; stray electric fields in the CCD detectors; chromatic terms in the instrumental and atmospheric optics; shifts in CCD relative positions of up to $$\\approx 10 \\mu m$$ when the DECam temperature cycles; and low-order distortions to each exposure from changes in atmospheric refraction and telescope alignment. Errors in this astrometric model are dominated by stochastic variations with typical amplitudes of 10-30 mas (in a 30 s exposure) and $$5^{\\prime}-10^{\\prime}$$ arcmin coherence length, plausibly attributed to Kolmogorov-spectrum atmospheric turbulence. The size of these atmospheric distortions is not closely related to the seeing. Given an astrometric reference catalog at density $$\\approx 0.7$$ $$arcmin^{-2}$$, e.g. from Gaia, the typical atmospheric distortions can be interpolated to $$\\approx$$ 7 mas RMS accuracy (for 30 s exposures) with $$1^{\\prime}$$ arcmin coherence length for residual errors. Remaining detectable error contributors are 2-4 mas RMS from unmodelled stray electric fields in the devices, and another 2-4 mas RMS from focal plane shifts between camera thermal cycles. Thus the astrometric solution for a single DECam exposure is accurate to 3-6 mas ( $$\\approx$$ 0.02 pixels, or $$\\approx$$ 300 nm) on the focal plane, plus the stochastic atmospheric distortion.« less

Sperm competition and maternal effects differentially influence testis and sperm size in Callosobruchus maculatus.

PubMed

Gay, L; Hosken, D J; Vasudev, R; Tregenza, T; Eady, P E

2009-05-01

The evolutionary factors affecting testis size are well documented, with sperm competition being of major importance. However, the factors affecting sperm length are not well understood; there are no clear theoretical predictions and the empirical evidence is inconsistent. Recently, maternal effects have been implicated in sperm length variation, a finding that may offer insights into its evolution. We investigated potential proximate and microevolutionary factors influencing testis and sperm size in the bruchid beetle Callosobruchus maculatus using a combined approach of an artificial evolution experiment over 90 generations and an environmental effects study. We found that while polyandry seems to select for larger testes, it had no detectable effect on sperm length. Furthermore, population density, a proximate indicator of sperm competition risk, was not significantly associated with sperm length or testis size variation. However, there were strong maternal effects influencing sperm length.

Diffusion lengths of silicon solar cells from luminescence images

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wuerfel, P.; Trupke, T.; Puzzer, T.

A method for spatially resolved measurement of the minority carrier diffusion length in silicon wafers and in silicon solar cells is introduced. The method, which is based on measuring the ratio of two luminescence images taken with two different spectral filters, is applicable, in principle, to both photoluminescence and electroluminescence measurements and is demonstrated experimentally by electroluminescence measurements on a multicrystalline silicon solar cell. Good agreement is observed with the diffusion length distribution obtained from a spectrally resolved light beam induced current map. In contrast to the determination of diffusion lengths from one single luminescence image, the method proposed heremore » gives absolute values of the diffusion length and, in comparison, it is much less sensitive to lateral voltage variations across the cell area as caused by local variations of the series resistance. It is also shown that measuring the ratio of two luminescence images allows distinguishing shunts or surface defects from bulk defects.« less

Scaling of chew cycle duration in primates.

PubMed

Ross, Callum F; Reed, David A; Washington, Rhyan L; Eckhardt, Alison; Anapol, Fred; Shahnoor, Nazima

2009-01-01

The biomechanical determinants of the scaling of chew cycle duration are important components of models of primate feeding systems at all levels, from the neuromechanical to the ecological. Chew cycle durations were estimated in 35 species of primates and analyzed in conjunction with data on morphological variables of the feeding system estimating moment of inertia of the mandible and force production capacity of the chewing muscles. Data on scaling of primate chew cycle duration were compared with the predictions of simple pendulum and forced mass-spring system models of the feeding system. The gravity-driven pendulum model best predicts the observed cycle duration scaling but is rejected as biomechanically unrealistic. The forced mass-spring model predicts larger increases in chew cycle duration with size than observed, but provides reasonable predictions of cycle duration scaling. We hypothesize that intrinsic properties of the muscles predict spring-like behavior of the jaw elevator muscles during opening and fast close phases of the jaw cycle and that modulation of stiffness by the central nervous system leads to spring-like properties during the slow close/power stroke phase. Strepsirrhines show no predictable relationship between chew cycle duration and jaw length. Anthropoids have longer chew cycle durations than nonprimate mammals with similar mandible lengths, possibly due to their enlarged symphyses, which increase the moment of inertia of the mandible. Deviations from general scaling trends suggest that both scaling of the jaw muscles and the inertial properties of the mandible are important in determining the scaling of chew cycle duration in primates.

LenVarDB: database of length-variant protein domains.

PubMed

Mutt, Eshita; Mathew, Oommen K; Sowdhamini, Ramanathan

2014-01-01

Protein domains are functionally and structurally independent modules, which add to the functional variety of proteins. This array of functional diversity has been enabled by evolutionary changes, such as amino acid substitutions or insertions or deletions, occurring in these protein domains. Length variations (indels) can introduce changes at structural, functional and interaction levels. LenVarDB (freely available at http://caps.ncbs.res.in/lenvardb/) traces these length variations, starting from structure-based sequence alignments in our Protein Alignments organized as Structural Superfamilies (PASS2) database, across 731 structural classification of proteins (SCOP)-based protein domain superfamilies connected to 2 730 625 sequence homologues. Alignment of sequence homologues corresponding to a structural domain is available, starting from a structure-based sequence alignment of the superfamily. Orientation of the length-variant (indel) regions in protein domains can be visualized by mapping them on the structure and on the alignment. Knowledge about location of length variations within protein domains and their visual representation will be useful in predicting changes within structurally or functionally relevant sites, which may ultimately regulate protein function. Non-technical summary: Evolutionary changes bring about natural changes to proteins that may be found in many organisms. Such changes could be reflected as amino acid substitutions or insertions-deletions (indels) in protein sequences. LenVarDB is a database that provides an early overview of observed length variations that were set among 731 protein families and after examining >2 million sequences. Indels are followed up to observe if they are close to the active site such that they can affect the activity of proteins. Inclusion of such information can aid the design of bioengineering experiments.

Atmospheric effects on earth rotation and polar motion

NASA Technical Reports Server (NTRS)

Salstein, David A.

1988-01-01

The variability in the earth's rotation rate not due to known solid body tides is dominated on time scales of about four years and less by variations in global atmospheric angular momentum (M) as derived from the zonal wind distribution. Among features seen in the length of day record produced by atmospheric forcing are the strong seasonal cycle, quasi-periodic fluctuations around 40-50 days, and an interannual signal forced by a strong Pacific warming event known as the El Nino. Momentum variations associated with these time scales arise in different latitudinal regions. Furthermore, winds in the stratosphere make a particularly important contribution to seasonal variability. Other related topics discussed here are: (1) comparisons of the M series from wind fields produced at different weather centers; (2) the torques that dynamically link the atmosphere and earth; and (3) longer-term nonatmospheric effects that can be seen upon removal of the atmospheric signal.an interestigapplication for climatological purposes is the use of the historical earth rotation series as a proxy for atmospheric wind variability prior to the era of upper-air data. Lastly, results pertaining to the role of atmospheric pressure systems in exciting rapid polar motion are presented.

Interannual variations in the hatching pattern, larval growth and otolith size of a sand-dwelling fish from central Chile

NASA Astrophysics Data System (ADS)

Rodríguez-Valentino, Camilo; Landaeta, Mauricio F.; Castillo-Hidalgo, Gissella; Bustos, Claudia A.; Plaza, Guido; Ojeda, F. Patricio

2015-09-01

The interannual variation (2010-2013) of larval abundance, growth and hatching patterns of the Chilean sand stargazer Sindoscopus australis (Pisces: Dactyloscopidae) was investigated through otolith microstructure analysis from samples collected nearshore (<500 m from shore) during austral late winter-early spring off El Quisco bay, central Chile. In the studied period, the abundance of larval stages in the plankton samples varied from 2.2 to 259.3 ind. 1000 m-3; larval abundance was similar between 2010 and 2011, and between 2012 and 2013, but increased significantly from 2011 to 2012. The estimated growth rates increased twice, from 0.09 to 0.21 mm day-1, between 2011 and 2013. Additionally, otolith size (radius, perimeter and area), related to body length of larvae, significantly decreased from 2010 to 2012, but increases significantly in 2013. Although the mean values of microincrement widths of sagitta otoliths were similar between 2010 and 2011 (around 0.6-0.7 μm), the interindividual variability increases in 2011 and 2013, suggesting large environmental variability experienced by larvae during these years. Finally, the hatching pattern of S. australis changed significantly from semi-lunar to lunar cycle after 2012.

Paleomagnetic Study of a Reversal of the Earth's Magnetic Field.

PubMed

Dunn, J R; Fuller, M; Ito, H; Schmidt, V A

1971-05-21

A detailed record of a field reversal has been obtained from the natural remanent magnetization of the Tatoosh intrusion in Mount Rainier National Park, Washington. The reversal took place at 14.7 +/- 1 million years and is interpreted to be from reverse to normal. A decrease in the intensity of the field of about an order of magnitude occurs immediately before the reversal, while its orientation remains substantially unchanged. The onset of the reversal is marked by abrupt swinging of the virtual geomagnetic pole along an arc of a great circle. During the reversal the pole traces a path across the Pacific. In the last stage of the process recorded in the sections, the succession of virtual geomagnetic poles is very similar to those generated by secular variation in the recent past. Although the cooling rate of the intrusion is not sufficiently well known to permit a useful calculation of the duration of the reversal process, an estimate based on the length of the supposed secular variation cycles gives 1 to 4 x 103 years for the reversal of field direction and approximately 1 x 104 years for the time scale of the intensity changes.

Stochastic variation in telomere shortening rate causes heterogeneity of human fibroblast replicative life span.

PubMed

Martin-Ruiz, Carmen; Saretzki, Gabriele; Petrie, Joanne; Ladhoff, Juliane; Jeyapalan, Jessie; Wei, Wenyi; Sedivy, John; von Zglinicki, Thomas

2004-04-23

The replicative life span of human fibroblasts is heterogeneous, with a fraction of cells senescing at every population doubling. To find out whether this heterogeneity is due to premature senescence, i.e. driven by a nontelomeric mechanism, fibroblasts with a senescent phenotype were isolated from growing cultures and clones by flow cytometry. These senescent cells had shorter telomeres than their cycling counterparts at all population doubling levels and both in mass cultures and in individual subclones, indicating heterogeneity in the rate of telomere shortening. Ectopic expression of telomerase stabilized telomere length in the majority of cells and rescued them from early senescence, suggesting a causal role of telomere shortening. Under standard cell culture conditions, there was a minor fraction of cells that showed a senescent phenotype and short telomeres despite active telomerase. This fraction increased under chronic mild oxidative stress, which is known to accelerate telomere shortening. It is possible that even high telomerase activity cannot fully compensate for telomere shortening in all cells. The data show that heterogeneity of the human fibroblast replicative life span can be caused by significant stochastic cell-to-cell variation in telomere shortening.

Environmental degradation of Opalinus Clay with cyclic variations in relative humidity

NASA Astrophysics Data System (ADS)

Wild, Katrin; Walter, Patric; Madonna, Claudio; Amann, Florian

2016-04-01

Clay shales are considered as favorable host rocks for nuclear waste repositories due to their low permeability, high sorption capacity and the potential for self-sealing. However, the favorable characteristics of the rock mass may change during tunnel excavation. Excavation is accompanied by stress redistribution and the development of an excavation damage zone. Furthermore, unloading and exposure to atmospheric conditions with a lower relative humidity (RH) causes desaturation of the rock mass close to the tunnel. This leads to shrinkage and the formation of desiccation cracks. During the open drift stage, seasonal atmospheric changes, especially RH variations, may alter the rock mass and influence the long-term crack evolution. This contribution discusses the influence of RH variation on the mechanical behavior of OPA. A series of specimens were exposed to short-term and long-term, stepwise cyclic RH variations between about 60 and 95% at constant temperature. Strains were measured using strain gauges to monitor the volumetric response during RH cycles. After each applied RH cycle, Brazilian tensile strength (BTS) tests were performed to identify whether there is a change in tensile strength due to environmental damage caused by the change in RH. Swelling and shrinkage of the specimens accompanied by irreversible volumetric expansion was observed as a consequence of the exposure to RH cycles. However, the irreversible strain was limited to the direction normal to bedding suggesting that internal damage is restricted along the bedding planes. No significant effect of cyclic RH variations on the BTS of the specimens was observed. The strength parallel to bedding remained constant over several cycles while the strength normal to bedding shows a slightly decreasing trend after 2 cycles. Furthermore, the water retention characteristics of the specimens were not altered significantly during stepwise RH cycling as the evolution of the water content was reversible throughout the cycles. For the RH variation used, the results suggest that the long-term crack evolution around excavations in OPA is not expected to be significantly influenced by environmental degradation but dominated by other processes such as consolidation and creep.

Morphological and genetic divergence in Swedish postglacial stickleback (Pungitius pungitius) populations

PubMed Central

2011-01-01

Background An important objective of evolutionary biology is to understand the processes that govern phenotypic variation in natural populations. We assessed patterns of morphological and genetic divergence among coastal and inland lake populations of nine-spined stickleback in northern Sweden. Coastal populations are either from the Baltic coast (n = 5) or from nearby coastal lakes (n = 3) that became isolated from the Baltic Sea (< 100 years before present, ybp). Inland populations are from freshwater lakes that became isolated from the Baltic approximately 10,000 ybp; either single species lakes without predators (n = 5), or lakes with a recent history of predation (n = 5) from stocking of salmonid predators (~50 ybp). Results Coastal populations showed little variation in 11 morphological traits and had longer spines per unit of body length than inland populations. Inland populations were larger, on average, and showed greater morphological variation than coastal populations. A principal component analysis (PCA) across all populations revealed two major morphological axes related to spine length (PC1, 47.7% variation) and body size (PC2, 32.9% variation). Analysis of PCA scores showed marked similarity in coastal (Baltic coast and coastal lake) populations. PCA scores indicate that inland populations with predators have higher within-group variance in spine length and lower within-group variance in body size than inland populations without predators. Estimates of within-group PST (a proxy for QST) from PCA scores are similar to estimates of FST for coastal lake populations but PST >FST for Baltic coast populations. PST >FST for PC1 and PC2 for inland predator and inland no predator populations, with the exception that PST

The Sun's Seismic Radius as Measured from the Fundamental Modes of Oscillations and Its Implications for the TSI Variations

NASA Astrophysics Data System (ADS)

Jain, Kiran; Tripathy, S. C.; Hill, F.

2018-05-01

In this Letter we explore the relationship between the solar seismic radius and total solar irradiance (TSI) during the last two solar cycles using the uninterrupted data from space-borne instruments on board the Solar and Heliospheric Observatory (SoHO) and the Solar Dynamics Observatory (SDO). The seismic radius is calculated from the fundamental (f) modes of solar oscillations utilizing the observations from SoHO/Michelson Doppler Imager (MDI) and SDO/Helioseismic and Magnetic Imager (HMI), and the TSI measurements are obtained from SoHO/VIRGO. Our study suggests that the major contribution to the TSI variation arises from the changes in magnetic field, while the radius variation plays a secondary role. We find that the solar irradiance increases with decreasing seismic radius; however, the anti-correlation between them is moderately weak. The estimated maximum change in seismic radius during a solar cycle is about 5 km, and is consistent in both solar cycles 23 and 24. Previous studies ;suggest a radius change at the surface of the order of 0.06 arcsec to explain the 0.1% variation in the TSI values during the solar cycle; however, our inferred seismic radius change is significantly smaller, hence the TSI variations cannot be fully explained by the temporal changes in seismic radius.

Simple Sequence Repeats Provide a Substrate for Phenotypic Variation in the Neurospora crassa Circadian Clock

PubMed Central

Michael, Todd P.; Park, Sohyun; Kim, Tae-Sung; Booth, Jim; Byer, Amanda; Sun, Qi; Chory, Joanne; Lee, Kwangwon

2007-01-01

Background WHITE COLLAR-1 (WC-1) mediates interactions between the circadian clock and the environment by acting as both a core clock component and as a blue light photoreceptor in Neurospora crassa. Loss of the amino-terminal polyglutamine (NpolyQ) domain in WC-1 results in an arrhythmic circadian clock; this data is consistent with this simple sequence repeat (SSR) being essential for clock function. Methodology/Principal Findings Since SSRs are often polymorphic in length across natural populations, we reasoned that investigating natural variation of the WC-1 NpolyQ may provide insight into its role in the circadian clock. We observed significant phenotypic variation in the period, phase and temperature compensation of circadian regulated asexual conidiation across 143 N. crassa accessions. In addition to the NpolyQ, we identified two other simple sequence repeats in WC-1. The sizes of all three WC-1 SSRs correlated with polymorphisms in other clock genes, latitude and circadian period length. Furthermore, in a cross between two N. crassa accessions, the WC-1 NpolyQ co-segregated with period length. Conclusions/Significance Natural variation of the WC-1 NpolyQ suggests a mechanism by which period length can be varied and selected for by the local environment that does not deleteriously affect WC-1 activity. Understanding natural variation in the N. crassa circadian clock will facilitate an understanding of how fungi exploit their environments. PMID:17726525

Integrating De Novo Transcriptome Assembly and Cloning to Obtain Chicken Ovocleidin-17 Full-Length cDNA

PubMed Central

Ning, ZhongHua; Hincke, Maxwell T.; Yang, Ning; Hou, ZhuoCheng

2014-01-01

Efficiently obtaining full-length cDNA for a target gene is the key step for functional studies and probing genetic variations. However, almost all sequenced domestic animal genomes are not ‘finished’. Many functionally important genes are located in these gapped regions. It can be difficult to obtain full-length cDNA for which only partial amino acid/EST sequences exist. In this study we report a general pipeline to obtain full-length cDNA, and illustrate this approach for one important gene (Ovocleidin-17, OC-17) that is associated with chicken eggshell biomineralization. Chicken OC-17 is one of the best candidates to control and regulate the deposition of calcium carbonate in the calcified eggshell layer. OC-17 protein has been purified, sequenced, and has had its three-dimensional structure solved. However, researchers still cannot conduct OC-17 mRNA related studies because the mRNA sequence is unknown and the gene is absent from the current chicken genome. We used RNA-Seq to obtain the entire transcriptome of the adult hen uterus, and then conducted de novo transcriptome assembling with bioinformatics analysis to obtain candidate OC-17 transcripts. Based on this sequence, we used RACE and PCR cloning methods to successfully obtain the full-length OC-17 cDNA. Temporal and spatial OC-17 mRNA expression analyses were also performed to demonstrate that OC-17 is predominantly expressed in the adult hen uterus during the laying cycle and barely at immature developmental stages. Differential uterine expression of OC-17 was observed in hens laying eggs with weak versus strong eggshell, confirming its important role in the regulation of eggshell mineralization and providing a new tool for genetic selection for eggshell quality parameters. This study is the first one to report the full-length OC-17 cDNA sequence, and builds a foundation for OC-17 mRNA related studies. We provide a general method for biologists experiencing difficulty in obtaining candidate gene full-length cDNA sequences. PMID:24676480

Integrating de novo transcriptome assembly and cloning to obtain chicken Ovocleidin-17 full-length cDNA.

PubMed

Zhang, Quan; Liu, Long; Zhu, Feng; Ning, ZhongHua; Hincke, Maxwell T; Yang, Ning; Hou, ZhuoCheng

2014-01-01

Efficiently obtaining full-length cDNA for a target gene is the key step for functional studies and probing genetic variations. However, almost all sequenced domestic animal genomes are not 'finished'. Many functionally important genes are located in these gapped regions. It can be difficult to obtain full-length cDNA for which only partial amino acid/EST sequences exist. In this study we report a general pipeline to obtain full-length cDNA, and illustrate this approach for one important gene (Ovocleidin-17, OC-17) that is associated with chicken eggshell biomineralization. Chicken OC-17 is one of the best candidates to control and regulate the deposition of calcium carbonate in the calcified eggshell layer. OC-17 protein has been purified, sequenced, and has had its three-dimensional structure solved. However, researchers still cannot conduct OC-17 mRNA related studies because the mRNA sequence is unknown and the gene is absent from the current chicken genome. We used RNA-Seq to obtain the entire transcriptome of the adult hen uterus, and then conducted de novo transcriptome assembling with bioinformatics analysis to obtain candidate OC-17 transcripts. Based on this sequence, we used RACE and PCR cloning methods to successfully obtain the full-length OC-17 cDNA. Temporal and spatial OC-17 mRNA expression analyses were also performed to demonstrate that OC-17 is predominantly expressed in the adult hen uterus during the laying cycle and barely at immature developmental stages. Differential uterine expression of OC-17 was observed in hens laying eggs with weak versus strong eggshell, confirming its important role in the regulation of eggshell mineralization and providing a new tool for genetic selection for eggshell quality parameters. This study is the first one to report the full-length OC-17 cDNA sequence, and builds a foundation for OC-17 mRNA related studies. We provide a general method for biologists experiencing difficulty in obtaining candidate gene full-length cDNA sequences.

The vls antigenic variation systems of Lyme disease Borrelia: eluding host immunity through both random, segmental gene conversion and framework heterogeneity

PubMed Central

Norris, Steven J.

2015-01-01

Summary Spirochetes that cause Lyme borreliosis (also called Lyme disease) possess the vls locus, encoding an elaborate antigenic variation system. This locus contains the expression site vlsE as well as a contiguous array of vls silent cassettes, which contain variations of the central cassette region of vlsE. The locus is present on one of the many linear plasmids in the organism, e.g. plasmid lp28-1 in the strain B. burgdorferi B31. Changes in the sequence of vlsE occur continuously during mammalian infection and consist of random, segmental, unidirectional recombination events between the silent cassettes and the cassette region of vlsE. These gene conversion events do not occur during in vitro culture or the tick portion of the infection cycle of Borrelia burgdorferi or the other related Borrelia species that cause Lyme disease. The mechanism of recombination is largely unknown, but requires the RuvAB Holliday junction branch migrase. Other features of the vls locus also appear to be required, including cis locations of vlsE and the silent cassettes and high G+C content and GC skew. The vls system is required for long-term survival of Lyme Borrelia in infected mammals and represents an important mechanism of immune evasion. In addition to sequence variation, immune selection also results in significant heterogeneity in the sequence of the surface lipoprotein VlsE. Despite antigenic variation, VlsE generates a robust antibody response, and both full length VlsE and the C6 peptide (corresponding to invariant region 6) are widely used in immunodiagnostic tests for Lyme disease. PMID:26104445

Temperature fine-tunes Mediterranean Arabidopsis thaliana life-cycle phenology geographically.

PubMed

Marcer, A; Vidigal, D S; James, P M A; Fortin, M-J; Méndez-Vigo, B; Hilhorst, H W M; Bentsink, L; Alonso-Blanco, C; Picó, F X

2018-01-01

To understand how adaptive evolution in life-cycle phenology operates in plants, we need to unravel the effects of geographic variation in putative agents of natural selection on life-cycle phenology by considering all key developmental transitions and their co-variation patterns. We address this goal by quantifying the temperature-driven and geographically varying relationship between seed dormancy and flowering time in the annual Arabidopsis thaliana across the Iberian Peninsula. We used data on genetic variation in two major life-cycle traits, seed dormancy (DSDS50) and flowering time (FT), in a collection of 300 A. thaliana accessions from the Iberian Peninsula. The geographically varying relationship between life-cycle traits and minimum temperature, a major driver of variation in DSDS50 and FT, was explored with geographically weighted regressions (GWR). The environmentally varying correlation between DSDS50 and FT was analysed by means of sliding window analysis across a minimum temperature gradient. Maximum local adjustments between minimum temperature and life-cycle traits were obtained in the southwest Iberian Peninsula, an area with the highest minimum temperatures. In contrast, in off-southwest locations, the effects of minimum temperature on DSDS50 were rather constant across the region, whereas those of minimum temperature on FT were more variable, with peaks of strong local adjustments of GWR models in central and northwest Spain. Sliding window analysis identified a minimum temperature turning point in the relationship between DSDS50 and FT around a minimum temperature of 7.2 °C. Above this minimum temperature turning point, the variation in the FT/DSDS50 ratio became rapidly constrained and the negative correlation between FT and DSDS50 did not increase any further with increasing minimum temperatures. The southwest Iberian Peninsula emerges as an area where variation in life-cycle phenology appears to be restricted by the duration and severity of the hot summer drought. The temperature-driven varying relationship between DSDS50 and FT detected environmental boundaries for the co-evolution between FT and DSDS50 in A. thaliana. In the context of global warming, we conclude that A. thaliana phenology from the southwest Iberian Peninsula, determined by early flowering and deep seed dormancy, might become the most common life-cycle phenotype for this annual plant in the region. © 2017 German Botanical Society and The Royal Botanical Society of the Netherlands.

The plurennial life cycles of the European Tettigoniidae (Insecta: Orthoptera) : 2. The effect of photoperiod on the induction of an initial diapause.

PubMed

Ingrisch, Sigfrid

1986-11-01

In eggs of European Tettigoniidae species, an initial diapause can occur just after blastoderm formation and a final diapause close to the end of embryonic development. The effect of photoperiod experienced maternally on the induction of the initial diapause was studied, using 13 species from Central and Southeastern Europe. In Conocephalus dorsalis and Platycleis albopunctata there was no initial diapause induced by photoperod, while, in Tettigonia-and Saga-species and in Metrioptera saussuriana it occurred independently of day length. In Metrioptera roeseli, M. bicolor, Leptophyes punctatissima, Eupholidoptera smyrnensis, and Decticus verrucivorus, oviposition at short day induced an initial diapause, while after oviposition at long day, the eggs developed directly until final diapause. On the other hand, in up to 1/4 of the eggs of Pholidoptera griseoaptera an initial diapause was induced by long day length. Populations of D. verrucivorus from different latitudes differed with respect to the critical day length. For E. smyrnensis and M. roeseli, a photoperiodic response curve was calculated.In the Rhodian population of E. smyrnensis, the dormancy sequence of initial and final embryonic diapause can be used for aestivation and hibernation within an annual life cycle, while enabling hibernation in successive years for the Central European species. The population of D. verrucivorus near Aachen has an "obligatory" plurennial life cycle, since the critical day length for development without initial diapause is above the range of day length occurring in the field.

On the prospect of using butterfly diagrams to predict cycle minimum

NASA Technical Reports Server (NTRS)

Wilson, Robert M.

1987-01-01

Features enabling the prediction of the beginning and the length of a solar cycle, in addition to the turning points in the period-growth dichotomy, have been identified based on butterfly diagrams for the period from 1874 to the present. The present results indicate that cycle 21 will be a long-period cycle ending after July 1987. On the assumption that April 1985 was the first occurrence of high latitude new cycle (cycle 22) spots during the decline of cycle 21 (the old cycle), it is suggested that the last occurrence of high latitude old cycle spots was September 1983 and that the minimum for cycle 22 will be about 1986.7 + or - 1.1 yr.

Menstrual Cycle Hormone Changes in Women Traversing Menopause: Study of Women’s Health Across the Nation

PubMed Central

Crawford, Sybil L.; El Khoudary, Samar R.; Allshouse, Amanda A.; Burnett-Bowie, Sherri-Ann; Finkelstein, Joel; Derby, Carol; Matthews, Karen; Kravitz, Howard M.; Harlow, Sioban D.; Greendale, Gail A.; Gold, Ellen B.; Kazlauskaite, Rasa; McConnell, Dan; Neal-Perry, Genevieve; Pavlovic, Jelena; Randolph, John; Weiss, Gerson; Chen, Hsiang-Yu; Lasley, Bill

2017-01-01

Context: Menstrual cycle hormone patterns in women approaching menopause are inadequately studied. Objective: To describe day-to-day menstrual cycle hormones in women as they approach menopause from the Study of Women's Health Across the Nation Daily Hormone Study (DHS). Design: DHS enrollees collected daily urine for one entire menstrual cycle or up to 50 days, whichever came first, annually, up to the final menstrual period (FMP) or for up to 10 years. Setting: Seven sites across the United States. Participants: A total of 511 premenopausal or early perimenopausal women at enrollment, within 10 years before menopause. Intervention: Time-to-FMP measurement. Main Outcome Measures: Evidence of luteal activity (ELA), determined using objective algorithms. Menstrual cycle/segment length; whole cycle, and segment integrated urinary luteinizing hormone, follicle-stimulating hormone, estrone conjugates, and pregnanediol glucuronide (Pdg) for each year, organized around the FMP. Results: Mean menstrual cycle length was remarkably preserved at 26 to 27 days in ELA cycles; non-ELA cycles had greater variability. The percentage of cycles that were ELA remained high until 5 years before the FMP (87.9%); only 22.8% of cycles within 1 year of the FMP were ELA. Whole cycle hormones remained relatively stable up to 3 years before the FMP, when gonadotropins began to increase. Pdg excretion declined slowly with progress to the FMP, but Pdg patterns of ELA cycles remained distinguishable from non-ELA. Conclusions: Menstrual cycle hormone patterns in perimenopausal women resemble those of midreproductive-aged women until 5 years before menopause, and presumably ovulatory cycles retain a potentially fertile pattern up to the end of reproductive life. PMID:28368525

Effects of meteorological factors and the lunar cycle on onset of parturition in cows.

PubMed

Ammann, T; Hässig, M; Rüegg, S; Bleul, U

2016-04-01

The present paper summarizes a comprehensive retrospective study that was undertaken to investigate effects of meteorological factors and lunar cycle on gestation length and daily birth rate in cows. To this end, all cattle births in Switzerland between 2008 and 2010 (n=2,091,159) were related to detailed matched weather recordings. The study revealed some statistically significant effects of climate (temperature, barometric pressure, relative humidity) and weather (thunderstorms, heat index) on gestational length. Thunderstorms on the day before birth reduced the gestation length by 0.5 days. An increase in the birth rate was correlated with the temperature on the day before birth and the barometric pressure 3 days before birth. Differences in the barometric pressure >15hPa increased the birth rate by 4%. Nevertheless, the effects were not consistent and the modeled size of effect was so small that a clinical implication is unlikely. Although the daily birth rate was unevenly distributed across the lunar cycle, no clear pattern could be identified. Compared to the mean birth rate across the lunar cycle the highest daily birth rate was detected on day 4 after new moon (+1.9%) and the lowest on day 20 (-2.1%). Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

Gate length variation effect on performance of gate-first self-aligned In₀.₅₃Ga₀.₄₇As MOSFET.

PubMed

Mohd Razip Wee, Mohd F; Dehzangi, Arash; Bollaert, Sylvain; Wichmann, Nicolas; Majlis, Burhanuddin Y

2013-01-01

A multi-gate n-type In₀.₅₃Ga₀.₄₇As MOSFET is fabricated using gate-first self-aligned method and air-bridge technology. The devices with different gate lengths were fabricated with the Al2O3 oxide layer with the thickness of 8 nm. In this letter, impact of gate length variation on device parameter such as threshold voltage, high and low voltage transconductance, subthreshold swing and off current are investigated at room temperature. Scaling the gate length revealed good enhancement in all investigated parameters but the negative shift in threshold voltage was observed for shorter gate lengths. The high drain current of 1.13 A/mm and maximum extrinsic transconductance of 678 mS/mm with the field effect mobility of 364 cm(2)/Vs are achieved for the gate length and width of 0.2 µm and 30 µm, respectively. The source/drain overlap length for the device is approximately extracted about 51 nm with the leakage current in order of 10(-8) A. The results of RF measurement for cut-off and maximum oscillation frequency for devices with different gate lengths are compared.

Gate Length Variation Effect on Performance of Gate-First Self-Aligned In0.53Ga0.47As MOSFET

PubMed Central

Mohd Razip Wee, Mohd F.; Dehzangi, Arash; Bollaert, Sylvain; Wichmann, Nicolas; Majlis, Burhanuddin Y.

2013-01-01

A multi-gate n-type In0.53Ga0.47As MOSFET is fabricated using gate-first self-aligned method and air-bridge technology. The devices with different gate lengths were fabricated with the Al2O3 oxide layer with the thickness of 8 nm. In this letter, impact of gate length variation on device parameter such as threshold voltage, high and low voltage transconductance, subthreshold swing and off current are investigated at room temperature. Scaling the gate length revealed good enhancement in all investigated parameters but the negative shift in threshold voltage was observed for shorter gate lengths. The high drain current of 1.13 A/mm and maximum extrinsic transconductance of 678 mS/mm with the field effect mobility of 364 cm2/Vs are achieved for the gate length and width of 0.2 µm and 30µm, respectively. The source/drain overlap length for the device is approximately extracted about 51 nm with the leakage current in order of 10−8 A. The results of RF measurement for cut-off and maximum oscillation frequency for devices with different gate lengths are compared. PMID:24367548

Modeling of a bimetallic eccentric cylindrical plasma waveguide based on a transmission line for TEM-mode

NASA Astrophysics Data System (ADS)

Golharani, Saeedeh; Jazi, Bahram; Jahanbakht, Sajad; Moeini-Nashalji, Azam

2018-07-01

In this paper, a plasma waveguide made of two eccentric cylindrical metallic walls have been studied according to the theory of transmission lines. The inductance per unit length L, the capacitance per unit length C, the resistance per unit length R and the shunt conductance per unit length G are obtained. The graphs of variations of the mentioned parameters vs. geometrical dimensions of waveguide are investigated. This investigations have been done for two different types of plasma waveguide. At first stage, plasma region will be considered in cold and collisional approximation and in second stage, a drift plasma in cold collisionless approximation will be considered. Also, graphs of phase velocity variation vs. the main parameters of the waveguide are presented.

Are Solar Activity Variations Amplified by the QBO: A Modeling Study

NASA Technical Reports Server (NTRS)

Mengel, J. G.; Mayr, H. G.; Drob, D. P.; Porter, H. S.; Bhartia, P. K. (Technical Monitor)

2002-01-01

Solar cycle activity effects (SCAE) in the lower and middle atmosphere, reported in several studies, are difficult to explain on the basis of the small changes in solar radiation that accompany the 11-year cycle. It is therefore natural to speculate that dynamical processes may come into play to produce a leverage. Such a leverage may be provided by the Quasi-Biennial Oscillation (QBO) in the zonal circulation of the stratosphere, which has been linked to solar activity variations. Driven primarily by wave mean flow interaction, the QBO period and its amplitude are variable but are also strongly influenced by the seasonal cycle in the solar radiation. This influence extends to low altitudes and is referred to as 'downward control'. Small changes in the solar radiative forcing may produce small changes in the period and phase of the QBO, but these in turn may produce measurable differences in the wind field. Thus, the QBO may be an amplifier of solar activity variations and a natural conduit of these variations to lower altitudes. To test this hypothesis, we conducted experiments with a 2D version of our Numerical Spectral Model that incorporates Hines' Doppler Spread Parameterization for small-scale gravity waves (GW). Solar cycle radiance variations (SCRV) are accounted for by changing the radiative heating rate on a logarithmic scale from 0.1% at the surface to 1% at 50 km to 10% at 100 km. With and without SCRV, but with the same GW flux, we then conduct numerical experiments to evaluate the magnitude of the SCAE in the zonal circulation. The numerical results indicate that, under certain conditions, the SCAE is significant and can extend to lower altitudes where the SCRV is small. For a modeled QBO period of 30 months, we find that the seasonal cycle in the solar forcing acts as a strong pacemaker to lock up the phase and period of the QBO. The SCAE then shows up primarily as a distinct but relatively weak amplitude modulation. But with a different QBO period between 30 and 34 (or less than 30, presumably) months, the seasonal phase lock is weak. Solar flux variations in the seasonal cycle then cause variations in the QBO period and phase. These amplify the SCAE to produce relatively large variations in the wind field. The SCAE in this case extends to mid-latitudes.

Revamping High School Accounting Courses.

ERIC Educational Resources Information Center

Bittner, Joseph

2002-01-01

Provides ideas for updating accounting courses: convert to semester length; focus on financial reporting/analysis, financial statements, the accounting cycle; turn textbook exercises into practice sets for the accounting cycle; teach about corporate accounting; and address individual line items on financial statements. (SK)

Effects of adrenalectomy and constant light on the rat estrous cycle.

PubMed

Hoffmann, J C

1978-01-01

Adult female ARS/Sprague-Dawley rats were allowed to acclimatize to a a lighting schedule of 12L:12D (LD) for 5 weeks. At that time, half the animals were adrenalectomized, and all rats remained in LD for an additional 4 to 5 weeks. Subsequently, half of the control and half of the adrenalectomized rats were exposed to constant light (LL) for an additional 8 weeks, at which time all animals were sacificed. Operated rats with regenerated adrenal tissue, determined either by macroscopic examination or serum corticosterone assay (about 50% of the rats), were excluded from all data calculations. Acute disturbances of estrous cycle length were minor. The long-term effects revealed a significant increase in 5-day cycles among the adrenalectomized rats, although the majority of cycles recorded (80%) were still 4 days in length. None of the rats in LD showed spontaneous persistent estrus. Adrenalectomy did not affect the number of ova shed. When placed in LL, the adrenalectomized rats continued to cycle longer than the unoperated controls, but all rats showed persistent estrus (5 or more consecutive days of vaginal cornification) within 7--8 weeks. Adrenalectomized rats had significantly higher body weights than controls. Relative uterine weight was decreased in these animals in both lighting regimens but only reached statistical significance in LD. Ovarian weight, by contrast, was significantly increased among adrenalectomized rats in LD but was identical in both groups in LL. Adrenal weight of intact rats was not altered by LL. Since estrous cycles can continue for at least 6 months in the absence of the adrenal gland, the persistent estrus that occurs in LL is not merely due to the loss of a diurnal rhythm of corticosteroids. Indeed, when adrenalectomized rats are placed in LL, they continue to show estrous cycles longer than do intact rats. Adrenalectomy does appear to increase the length of the cycle in some animals, and the hormonal basis for this warrants further study.

Solar Variability from 240 to 1750 nm in Terms of Faculae Brightening and Sunspot Darkening from SCIAMACHY

NASA Astrophysics Data System (ADS)

Pagaran, J.; Weber, M.; Burrows, J.

2009-08-01

The change of spectral decomposition of the total radiative output on various timescales of solar magnetic activity is of large interest to terrestrial and solar-stellar atmosphere studies. Starting in 2002, SCIAMACHY was the first satellite instrument to observe daily solar spectral irradiance (SSI) continuously from 230 nm (UV) to 1750 nm (near-infrared; near-IR). In order to address the question of how much UV, visible (vis), and IR spectral regions change on 27 day and 11 year timescales, we parameterize short-term SSI variations in terms of faculae brightening (Mg II index) and sunspot darkening (photometric sunspot index) proxies. Although spectral variations above 300 nm are below 1% and, therefore, well below the accuracy of absolute radiometric calibration, relative accuracy for short-term changes is shown to be in the per mill range. This enables us to derive short-term spectral irradiance variations from the UV to the near-IR. During Halloween solar storm in 2003 with a record high sunspot area, we observe a reduction of 0.3% in the near-IR to 0.5% in the vis and near-UV. This is consistent with a 0.4% reduction in total solar irradiance (TSI). Over an entire 11 year solar cycle, SSI variability covering simultaneously the UV, vis, and IR spectral regions have not been directly observed so far. Using variations of solar proxies over solar cycle 23, solar cycle spectral variations have been estimated using scaling factors that best matched short-term variations of SCIAMACHY. In the 300-400 nm region, which strongly contributes to TSI solar cycle change, a contribution of 34% is derived from SCIAMACHY observations, which is lower than the reported values from SUSIM satellite data and the empirical SATIRE model. The total UV contribution (below 400 nm) to TSI solar cycle variations is estimated to be 55%.

Modeling thermospheric neutral density

NASA Astrophysics Data System (ADS)

Qian, Liying

Satellite drag prediction requires determination of thermospheric neutral density. The NCAR Thermosphere-Ionosphere-Electrodynamics General Circulation Model (TIEGCM) and the global-mean Thermosphere-Ionosphere-Mesosphere-Electrodynamics General Circulation Model (TIMEGCM) were used to quantify thermospheric neutral density and its variations, focusing on annual/semiannual variation, the effect of using measured solar irradiance on model calculations of solar-cycle variation, and global change in the thermosphere. Satellite drag data and the MSIS00 empirical model were utilized to compare to the TIEGCM simulations. The TIEGCM simulations indicated that eddy diffusion and its annual/semiannual variation is a mechanism for annual/semiannual density variation in the thermosphere. It was found that eddy diffusion near the turbopause can effectively influence thermospheric neutral density. Eddy diffusion, together with annual insolation variation and large-scale circulation, generated global annual/semiannual density variation observed by satellite drag. Using measured solar irradiance as solar input for the TIEGCM improved the solar-cycle dependency of the density calculation shown in F10.7 -based thermospheric empirical models. It has been found that the empirical models overestimate density at low solar activity. The TIEGCM simulations did not show such solar-cycle dependency. Using historic measurements of CO2 and F 10.7, simulations of the global-mean TIMEGCM showed that thermospheric neutral density at 400 km had an average long-term decrease of 1.7% per decade from 1970 to 2000. A forecast of density decrease for solar cycle 24 suggested that thermospheric density will decrease at 400 km from present to the end of solar cycle 24 at a rate of 2.7% per decade. Reduction in thermospheric density causes less atmospheric drag on earth-orbiting space objects. The implication of this long-term decrease of thermospheric neutral density is that it will increase the lifetime of satellites, but also it will increase the amount of space junk.

Assessment of Musculoskeletal Strength and Levels of Fatigue during Different Phases of Menstrual Cycle in Young Adults

PubMed Central

D Souza, Urban John; Shivaprakash, G

2017-01-01

Introduction Some of the physiological factors and athletic performance might show variation along the phases of menstrual cycle. The alterations seen in these physiological parameters of various systems relating to oscillations in hormonal levels do affect the autonomic nervous system and metabolic functions. Former studies heave inconclusively about the influence of hormones on exercise performance, predominantly muscle strength and rate of fatigue during different phases of the menstrual cycle. Studies regarding influence of these variations during bleeding phase were not done. Aim To evaluate the muscle strength variations and also the rate of fatigue during various phases of the menstrual cycle in young adults. Materials and Methods This was a prospective study conducted among 100 healthy adult female volunteers aged 18-24 years, with normal regular menstrual cycles persistent between 26- 32 days (average of 28 days), for a minimum of last 6 months. Muscle strength was assessed by calculating the work done and fatigue rate using Mosso’s ergograph and by handgrip dynamometer strength. Each subject was evaluated consecutively for two menstrual cycles in all three phases which were classified as Phase 1- Menstrual phase, Phase 2- Follicular phase and Phase 3- Luteal phase. The data obtained was analysed by statistical tool One-way ANOVA followed by a post-hoc Tukeys test. A p-value of ≤ 0.05 was considered significant. Results The amount of work done and handgrip strength was significantly higher in phase 2 (p<0.001) and relatively reduced in phase 1 and 3 (p<0.001) of menstrual cycle. In terms of fatigue rate percentage, phase 2 showed significantly lesser values (p<0.001) as compared to phase 1 and 3 of menstrual cycle. Conclusion We conclude that the cyclical variation in endogenous reproductive hormones increases the muscle strength in follicular phase of the menstrual cycle. Thus provide support for the influence of these hormones in regulation of these parameters in the premenopausal age group. PMID:28384857

Observations of Cepheids with the MOST satellite: contrast between pulsation modes

NASA Astrophysics Data System (ADS)

Evans, N. R.; Szabó, R.; Derekas, A.; Szabados, L.; Cameron, C.; Matthews, J. M.; Sasselov, D.; Kuschnig, R.; Rowe, J. F.; Guenther, D. B.; Moffat, A. F. J.; Rucinski, S. M.; Weiss, W. W.

2015-02-01

The quantity and quality of satellite photometric data strings is revealing details in Cepheid variation at very low levels. Specifically, we observed a Cepheid pulsating in the fundamental mode and one pulsating in the first overtone with the Canadian MOST (Microvariability and Oscillations of Stars) satellite. The 3.7-d period fundamental mode pulsator (RT Aur) has a light curve that repeats precisely, and can be modelled by a Fourier series very accurately. The overtone pulsator (SZ Tau, 3.1 d period) on the other hand shows light-curve variation from cycle to cycle which we characterize by the variations in the Fourier parameters. We present arguments that we are seeing instability in the pulsation cycle of the overtone pulsator, and that this is also a characteristic of the O - C curves of overtone pulsators. On the other hand, deviations from cycle to cycle as a function of pulsation phase follow a similar pattern in both stars, increasing after minimum radius. In summary, pulsation in the overtone pulsator is less stable than that of the fundamental mode pulsator at both long and short time-scales.

Variations in the Life Cycle of Anemone patens L. (Ranunculaceae) in Wild Populations of Canada

PubMed Central

Kricsfalusy, Vladimir

2016-01-01

Based on a study of a perennial herb Anemone patens L. (Ranunculaceae) in a variety of natural habitats in Saskatchewan, Canada, eight life stages (seed, seedling, juvenile, immature, vegetative, generative, subsenile, and senile) are distinguished and characterized in detail. The species ontogenetic growth patterns are investigated. A. patens has a long life cycle that may last for several decades which leads to the formation of compact clumps. The distribution and age of clumps vary substantially in different environments with different levels of disturbance. The plant ontogeny includes the regular cycle with reproduction occurring through seeds. There is an optional subsenile vegetative disintegration at the end of the life span. The following variations in the life cycle of A. patens are identified: with slower development in young age, with an accelerated development, with omission of the generative stage, with retrogression to previous life stages in mature age, and with vegetative dormancy. The range of variations in the life cycle of A. patens may play an important role in maintaining population stability in different environmental conditions and management regimes. PMID:27376340

The influence of photoperiod and temperature on the Neosho Madtom (norturus placidus) reproductive cycle

USGS Publications Warehouse

Albers, J.L.; Wildhaber, M.L.; Noltie, Douglas B.

2001-01-01

The key to successful fish culture is to understand the environmental cues that trigger spawning. In temperate fishes, photoperiod and temperature are important in many species including the family Ictaluridae. The object of this study was to examine whether natural photo-thermal conditions in the laboratory could stimulate the reproductive cycle of Neosho madtoms (Noturus placidus). For three years a small population of Neosho madtoms were maintained under natural conditions and continually sampled using ultrasound to examine interior gonad state and exterior body measurements. The purpose was to examine the secondary sexual characteristics that normally occur during the spawning period. Every year the fish cycled in and out of spawning condition, including production and reabsorbtion of eggs. The best external measurement found to distinguish between sexes was the ratio of head length to total length. Internal measurements found the average number of eggs per female increased as the fish length increased and over time but the average sizes of the eggs were constant. After years in the simulated environment 13 different fish were involved in ten spawns. The use of ultrasound to examine gonad in madtoms is promising, especially the lack of injury associated with the procedure. Overall laboratory conditions that simulated the natural photo-thermal environment, especially daily temperature fluctuations, were successful at stimulating the reproductive cycle of Neosho madtoms including egg cycling and spawning. These results show promise towards culture of madtoms especially for those species that are rare and endangered.

Multi-Wavelength Measurement of Bus Exhausts Using a Four QC Laser Spectrometer

NASA Astrophysics Data System (ADS)

Hay, K. G.; Wilson, D.; Duxbury, G.; Langford, N.

2010-06-01

Using a portable, lightweight, four laser intra-pulse quantum cascade laser spectrometer we have measured the variation of the composition of exhaust gases emitted by diesel engined buses which are representative of the decades from the 1930's until the 1990's. The lasers and the fast detector used in the spectrometer are Peltier cooled, and the spectra are recorded using each laser in turn, in a repeated four laser cycle. The instrument is controlled via a ruggedised laptop computer. The wavelengths of the lasers used were 7.84 microns (methane, nitrous oxide and formaldehyde), 6.13 microns (nitrogen dioxide) 5.25 microns (nitric oxide and water) and 4.88 microns (carbon monoxide and carbon dioxide). The path length of the multiple pass absorption cell used was 77 m. The results we will present demonstrate the possibility of deploying this type of instrument for investigating gas emissions from a variety of sources.

Heterogeneous rupture on homogenous faults: Three-dimensional spontaneous rupture simulations with thermal pressurization

NASA Astrophysics Data System (ADS)

Urata, Yumi; Kuge, Keiko; Kase, Yuko

2008-11-01

To understand role of fluid on earthquake rupture processes, we investigated effects of thermal pressurization on spatial variation of dynamic rupture by computing spontaneous rupture propagation on a rectangular fault. We found thermal pressurization can cause heterogeneity of rupture even on a fault of uniform properties. On drained faults, tractions drop linearly with increasing slip in the same way everywhere. However, by changing the drained condition to an undrained one, the slip-weakening curves become non-linear and depend on locations on faults with small shear zone thickness w, and the dynamic frictional stresses vary spatially and temporally. Consequently, the super-shear transition fault length decreases for small w, and the final slip distribution can have some peaks regardless of w, especially on undrained faults. These effects should be taken into account of determining dynamic rupture parameters and modeling earthquake cycles when the presence of fluid is suggested in the source regions.

Variational learning and bits-back coding: an information-theoretic view to Bayesian learning.

PubMed

Honkela, Antti; Valpola, Harri

2004-07-01

The bits-back coding first introduced by Wallace in 1990 and later by Hinton and van Camp in 1993 provides an interesting link between Bayesian learning and information-theoretic minimum-description-length (MDL) learning approaches. The bits-back coding allows interpreting the cost function used in the variational Bayesian method called ensemble learning as a code length in addition to the Bayesian view of misfit of the posterior approximation and a lower bound of model evidence. Combining these two viewpoints provides interesting insights to the learning process and the functions of different parts of the model. In this paper, the problem of variational Bayesian learning of hierarchical latent variable models is used to demonstrate the benefits of the two views. The code-length interpretation provides new views to many parts of the problem such as model comparison and pruning and helps explain many phenomena occurring in learning.

Catalogue of 55-80 MeV solar proton events extending through solar cycles 23 and 24

NASA Astrophysics Data System (ADS)

Paassilta, Miikka; Raukunen, Osku; Vainio, Rami; Valtonen, Eino; Papaioannou, Athanasios; Siipola, Robert; Riihonen, Esa; Dierckxsens, Mark; Crosby, Norma; Malandraki, Olga; Heber, Bernd; Klein, Karl-Ludwig

2017-06-01

We present a new catalogue of solar energetic particle events near the Earth, covering solar cycle 23 and the majority of solar cycle 24 (1996-2016), based on the 55-80 MeV proton intensity data gathered by the Solar and Heliospheric Observatory/the Energetic and Relativistic Nuclei and Electron experiment (SOHO/ERNE). In addition to ERNE proton and heavy ion observations, data from the Advanced Composition Explorer/Electron, Proton and Alpha Monitor (ACE/EPAM) (near-relativistic electrons), SOHO/EPHIN (Electron Proton Helium Instrument) (relativistic electrons), SOHO/LASCO (Large Angle and Spectrometric Coronagraph) (coronal mass ejections, CMEs) and Geostationary Operational Environmental Satellite (GOES) soft X-ray experiments are also considered and the associations between the particle and CME/X-ray events deduced to obtain a better understanding of each event. A total of 176 solar energetic particle (SEP) events have been identified as having occurred during the time period of interest; their onset and solar release times have been estimated using both velocity dispersion analysis (VDA) and time-shifting analysis (TSA) for protons, as well as TSA for near-relativistic electrons. Additionally, a brief statistical analysis was performed on the VDA and TSA results, as well as the X-rays and CMEs associated with the proton/electron events, both to test the viability of the VDA and to investigate possible differences between the two solar cycles. We find, in confirmation of a number of previous studies, that VDA results for protons that yield an apparent path length of 1 AU < s ≾ 3 AU seem to be useful, but those outside this range are probably unreliable, as evidenced by the anticorrelation between apparent path length and release time estimated from the X-ray activity. It also appears that even the first-arriving energetic protons apparently undergo significant pitch angle scattering in the interplanetary medium, with the resulting apparent path length being on average about twice the length of the spiral magnetic field. The analysis indicates an increase in high-energy SEP events originating from the far-eastern solar hemisphere; for instance, such an event with a well-established associated GOES flare has so far occurred three times during cycle 24 but possibly not at all during cycle 23. The generally lower level of solar activity during cycle 24, as opposed to cycle 23, has probably caused a significant decrease in total ambient pressure in the interplanetary space, leading to a larger proportion of SEP-associated halo-type CMEs. Taken together, these observations point to a qualitative difference between the two solar cycles.

Plot intensity and cycle-length effects on growth and removals estimates from forest inventories

Treesearch

Paul C. Van Deusen; Francis A. Roesch

2015-01-01

Continuous forest inventory planners can allocate the budget to more plots per acre or a shorter remeasurement cycle. A higher plot intensity benefits small area estimation and allows for more precision in current status estimates. Shorter cycles may provide better estimates of growth, removals and mortality. On a fixed budget, the planner can't have both greater...

Long-term EEJ variations by using the improved EE-index

NASA Astrophysics Data System (ADS)

Fujimoto, A.; Uozumi, T.; Abe, Sh.; Matsushita, H.; Imajo, Sh.; Ishitsuka, J. K.; Yoshikawa, A.

2016-03-01

In 2008, International Center for Space Weather Science and Education, Kyushu University (ICSWSE) proposed the EE-index, which is an index to monitor the equatorial geomagnetic phenomena. EE-index has been improved with the development of the MAGnetic Data Acquisition System and the Circum-pan Pacific Magnetometer Network (MAGDAS/CPMN) and the enormous archive of MAGDAS/CPMN data over 10 years since the initial article. Using the improved EE-index, we examined the solar cycle variation of equatorial electrojet (EEJ) by the time series analysis for EUEL (one part of EE-index) at Ancon in Peru and the solar activity from September 18, 1998 to March 31, 2015. We found that the long-term variation of daily EEJ peak intensity has a trend similar to that of F10.7 (the solar activity). The power spectrum of the daily EEJ peak has clearly two dominant peaks throughout the analysis interval: 14.5 days and 180 days (semi-annual). The solar cycle variation of daily EEJ peak correlates well with that of F10.7 (the correlation coefficient 0.99). We conclude that the daily EEJ peak intensity is roughly determined as the summation of the long-period trend of the solar activity resulting from the solar cycle and day-to-day variations caused by various sources such as lunar tides, geometric effects, magnetospheric phenomena and atmospheric phenomena. This work presents the primary evidence for solar cycle variations of EEJ on the long-term study of the EE-index

Variation in Size and Form between Left and Right Maxillary Central Incisor Teeth.

PubMed

Vadavadagi, Suneel V; Hombesh, M N; Choudhury, Gopal Krishna; Deshpande, Sumith; Anusha, C V; Murthy, D Kiran

2015-02-01

To compare the variation in size of left and right maxillary central incisors for male patients (using digital calipers of 0.01 mm accuracy). To compare the variation in size of left and right maxillary central incisors for female patients (using digital calipers of 0.01 mm accuracy). To find out the difference between the maxillary central incisors of men and women. Its clinical applicability if difference exists. A total of 70 dental students of PMNM Dental College and Hospital were selected. Of 70 dental students, 40 male and 30 female were selected. Impressions were made for all subjects, using irreversible hydrocolloid (Algitex, manufacturer DPI, Batch-T-8804) using perforated stock metal trays. The mesiodistal crown width and cervical width were measured for each incisor and recorded separately for left and right teeth. The length was measured for each incisor and recorded separately for left and right maxillary central incisor using digitec height caliper. The mean value of maximum crown length of maxillary left central incisor of male was greater in length compared with maxillary right central incisor. Mean value of maximum crown length for male patient right and left side was greater compared with maximum crown length of female patient. When compared the dimensions of teeth between two sex, male group shows larger values to female group.

Variability of Arctic Sea Ice as Determined from Satellite Observations

NASA Technical Reports Server (NTRS)

Parkinson, Claire L.

1999-01-01

The compiled, quality-controlled satellite multichannel passive-microwave record of polar sea ice now spans over 18 years, from November 1978 through December 1996, and is revealing considerable information about the Arctic sea ice cover and its variability. The information includes data on ice concentrations (percent areal coverages of ice), ice extents, ice melt, ice velocities, the seasonal cycle of the ice, the interannual variability of the ice, the frequency of ice coverage, and the length of the sea ice season. The data reveal marked regional and interannual variabilities, as well as some statistically significant trends. For the north polar ice cover as a whole, maximum ice extents varied over a range of 14,700,000 - 15,900,000 sq km, while individual regions experienced much greater percent variations, for instance, with the Greenland Sea having a range of 740,000 - 1,110,000 sq km in its yearly maximum ice coverage. In spite of the large variations from year to year and region to region, overall the Arctic ice extents showed a statistically significant, 2.80% / decade negative trend over the 18.2-year period. Ice season lengths, which vary from only a few weeks near the ice margins to the full year in the large region of perennial ice coverage, also experienced interannual variability, along with spatially coherent overall trends. Linear least squares trends show the sea ice season to have lengthened in much of the Bering Sea, Baffin Bay, the Davis Strait, and the Labrador Sea, but to have shortened over a much larger area, including the Sea of Okhotsk, the Greenland Sea, the Barents Sea, and the southeastern Arctic.

Isolated few-cycle radiation from chirped-pulse compression of a superradiant free-electron laser

DOE PAGES

Huang, Yen -Chieh; Zhang, Zhen; Chen, Chia -Hsiang; ...

2015-08-31

When a short electron bunch traverses an undulator to radiate a wavelength longer than the bunch length, intense superradiance from the electron bunch can quickly deplete the electron’s kinetic energy and lead to generation of an isolated chirped radiation pulse. Here, we develop a theory to describe this novel chirped pulse radiation in a superradiant free-electron laser and show the opportunity to generate isolated few-cycle high-power radiation through chirped-pulse compression after the undulator. The theory is completely characterized by how fast the electron energy is depleted for a given length of an undulator. We further present two design examples atmore » the THz and extreme-ultraviolet wavelengths and numerically generate isolated three- and nine-cycle radiation pulses, respectively.« less

Neandertal clavicle length

PubMed Central

Trinkaus, Erik; Holliday, Trenton W.; Auerbach, Benjamin M.

2014-01-01

The Late Pleistocene archaic humans from western Eurasia (the Neandertals) have been described for a century as exhibiting absolutely and relatively long clavicles. This aspect of their body proportions has been used to distinguish them from modern humans, invoked to account for other aspects of their anatomy and genetics, used in assessments of their phylogenetic polarities, and used as evidence for Late Pleistocene population relationships. However, it has been unclear whether the usual scaling of Neandertal clavicular lengths to their associated humeral lengths reflects long clavicles, short humeri, or both. Neandertal clavicle lengths, along with those of early modern humans and latitudinally diverse recent humans, were compared with both humeral lengths and estimated body masses (based on femoral head diameters). The Neandertal do have long clavicles relative their humeri, even though they fall within the ranges of variation of early and recent humans. However, when scaled to body masses, their humeral lengths are relatively short, and their clavicular lengths are indistinguishable from those of Late Pleistocene and recent modern humans. The few sufficiently complete Early Pleistocene Homo clavicles seem to have relative lengths also well within recent human variation. Therefore, appropriately scaled clavicular length seems to have varied little through the genus Homo, and it should not be used to account for other aspects of Neandertal biology or their phylogenetic status. PMID:24616525

Photoperiod and fur lengths in the arctic fox ( Alopex lagopus L.)

NASA Astrophysics Data System (ADS)

Underwood, L. S.; Reynolds, Patricia

1980-03-01

Pelage is seasonally dimorphic in the Arctic fox. During the winter, fur lengths for this species are nearly double similar values taken during the summer season. Considerable site-specific differences in fur length are noted. In general, body sites which are exposed to the environment when an Arctic fox lies in a curled position show greater fur lengths in all seasons and greater seasonal variations than body sites that are more protected during rest. Well-furred sites may tend to conserve heat during periods of inactivity, and scantily furred sites may tend to dissipate heat during periods of exercise. The growth of winter fur may compensate for the severe cold of the arctic winter. Changes in fur lengths indicate a definite pattern in spite of individual variations. During the fall months, fur lengths seem to lag behind an increasing body-to-ambient temperature gradient. Both body-to-ambient temperature gradients and fur lengths peak during December through February. From March through June, gradual environmental warming is accompanied by a decrease in average fur lengths. Thus, there appears to be a remarkable parallel between the body-to-ambient temperature gradient and the fur lengths. The growth of fur in the Arctic fox parallels annual changes in ambient temperature and photoperiod.

Recombination rate predicts inversion size in Diptera.

PubMed Central

Cáceres, M; Barbadilla, A; Ruiz, A

1999-01-01

Most species of the Drosophila genus and other Diptera are polymorphic for paracentric inversions. A common observation is that successful inversions are of intermediate size. We test here the hypothesis that the selected property is the recombination length of inversions, not their physical length. If so, physical length of successful inversions should be negatively correlated with recombination rate across species. This prediction was tested by a comprehensive statistical analysis of inversion size and recombination map length in 12 Diptera species for which appropriate data are available. We found that (1) there is a wide variation in recombination map length among species; (2) physical length of successful inversions varies greatly among species and is inversely correlated with the species recombination map length; and (3) neither the among-species variation in inversion length nor the correlation are observed in unsuccessful inversions. The clear differences between successful and unsuccessful inversions point to natural selection as the most likely explanation for our results. Presumably the selective advantage of an inversion increases with its length, but so does its detrimental effect on fertility due to double crossovers. Our analysis provides the strongest and most extensive evidence in favor of the notion that the adaptive value of inversions stems from their effect on recombination. PMID:10471710

Phenotypic Characterization and Multivariate Analysis to Explain Body Conformation in Lesser Known Buffalo (Bubalus bubalis) from North India

PubMed Central

Vohra, V.; Niranjan, S. K.; Mishra, A. K.; Jamuna, V.; Chopra, A.; Sharma, Neelesh; Jeong, Dong Kee

2015-01-01

Phenotypic characterization and body biometric in 13 traits (height at withers, body length, chest girth, paunch girth, ear length, tail length, length of tail up to switch, face length, face width, horn length, circumference of horn at base, distances between pin bone and hip bone) were recorded in 233 adult Gojri buffaloes from Punjab and Himachal Pradesh states of India. Traits were analysed by using varimax rotated principal component analysis (PCA) with Kaiser Normalization to explain body conformation. PCA revealed four components which explained about 70.9% of the total variation. First component described the general body conformation and explained 31.5% of total variation. It was represented by significant positive high loading of height at wither, body length, heart girth, face length and face width. The communality ranged from 0.83 (hip bone distance) to 0.45 (horn length) and unique factors ranged from 0.16 to 0.55 for all these 13 different biometric traits. Present study suggests that first principal component can be used in the evaluation and comparison of body conformation in buffaloes and thus provides an opportunity to distinguish between early and late maturing to adult, based on a small group of biometric traits to explain body conformation in adult buffaloes. PMID:25656215

Examining Associations of Environmental Characteristics with Recreational Cycling Behaviour by Street-Level Strava Data

PubMed Central

Sun, Yeran; Du, Yunyan; Wang, Yu; Zhuang, Liyuan

2017-01-01

Policymakers pay much attention to effectively increasing frequency of people’s cycling in the context of developing sustainable and green cities. Investigating associations of environmental characteristics and cycling behaviour could offer implications for changing urban infrastructure aiming at encouraging active travel. However, earlier examinations of associations between environmental characteristics and active travel behaviour are limited by low spatial granularity and coverage of traditional data. Crowdsourced geographic information offers an opportunity to determine the fine-grained travel patterns of people. Particularly, Strava Metro data offer a good opportunity for studies of recreational cycling behaviour as they can offer hourly, daily or annual cycling volumes with different purposes (commuting or recreational) in each street across a city. Therefore, in this study, we utilised Strava Metro data for investigating associations between environmental characteristics and recreational cycling behaviour at a large spatial scale (street level). In this study, we took account of population density, employment density, road length, road connectivity, proximity to public transit services, land use mix, proximity to green space, volume of motor vehicles and traffic accidents in an empirical investigation over Glasgow. Empirical results reveal that Strava cyclists are more likely to cycle for recreation on streets with short length, large connectivity or low volume of motor vehicles or on streets surrounded by residential land. PMID:28617345

Examining Associations of Environmental Characteristics with Recreational Cycling Behaviour by Street-Level Strava Data.

PubMed

Sun, Yeran; Du, Yunyan; Wang, Yu; Zhuang, Liyuan

2017-06-15

Policymakers pay much attention to effectively increasing frequency of people's cycling in the context of developing sustainable and green cities. Investigating associations of environmental characteristics and cycling behaviour could offer implications for changing urban infrastructure aiming at encouraging active travel. However, earlier examinations of associations between environmental characteristics and active travel behaviour are limited by low spatial granularity and coverage of traditional data. Crowdsourced geographic information offers an opportunity to determine the fine-grained travel patterns of people. Particularly, Strava Metro data offer a good opportunity for studies of recreational cycling behaviour as they can offer hourly, daily or annual cycling volumes with different purposes (commuting or recreational) in each street across a city. Therefore, in this study, we utilised Strava Metro data for investigating associations between environmental characteristics and recreational cycling behaviour at a large spatial scale (street level). In this study, we took account of population density, employment density, road length, road connectivity, proximity to public transit services, land use mix, proximity to green space, volume of motor vehicles and traffic accidents in an empirical investigation over Glasgow. Empirical results reveal that Strava cyclists are more likely to cycle for recreation on streets with short length, large connectivity or low volume of motor vehicles or on streets surrounded by residential land.

Spatial variation in below ground carbon cycling in a pristine peatland, driven by present and past vegetation

NASA Astrophysics Data System (ADS)

Mathijssen, Paul; Knorr, Klaus-Holger; Gałka, Mariusz; Borken, Werner

2017-04-01

Peat carbon cycling is controlled by both large scale factors, such as climate and hydrological setting, and small scale factors, such as microtopography, vegetation, litter quality, and rooting depth. These small scale factors commonly vary within peatlands, causing variation in the carbon balance at different locations within the same site. Understanding the relationship between small scale carbon cycling and vegetation helps us to assess the variation of carbon dynamics of peatlands, because vegetation composition acts as an integrator of factors such as microtopography, hydrology, and nutrient level. Variation in vegetation illustrates spatial variation of these underlying factors. Furthermore, the presence of certain plant species affects carbon cycling directly through litter quality or aeration through root tissues. In order to understand these within-site variations in terms of carbon cycling, we investigated carbon accumulation, decomposition, and biogeochemistry of pore waters along a transect of peat cores with changing vegetation and water levels in an ombrotrophic peatland in southern Patagonia. The transect ran from a Sphagnum magellanicum dominated spot with relatively high water table, to intermediately wet spots with mixed Sphagnum/shrubs vegetation, or dominated by Cyperaceae, eventually to a more elevated and drier spot dominated by cushion plants (mainly Astelia pumila). There were large differences in peat accumulation rates and peat densities, with faster peat growth and lower densities under Sphagnum, but overall carbon accumulation rates were quite similar in the various microenvironments. At most plots C/N ratios decreased with depth, concurrent with increasing humification index derived from FT-IR spectra. But under cushion plants this relation was opposite: more humification with depth, but also C/N ratios increases. This reflected the differing source material at depth under the cushion plants, and that the cushion plant peat layers were formed on top of Sphagnum peat. The divergent source material throughout a peat core makes it difficult to use C/N ratios to indicate peat decomposition rates. Although the low peat density and higher C/N ratios indicate that overall carbon turnover is slow at Sphagnum plots, pore water methane concentrations were elevated. At cushion plant plots, however, higher redox potentials exist until greater depths due to aerenchymous roots, inhibiting methane production and release. Our results demonstrate that large variation exists within pristine bogs, in terms of decomposition patterns, organic matter quality, and carbon turnover pathways, corresponding to variation in surface moisture levels and vegetation. Furthermore, variation in carbon cycling properties are maintained in buried peat layers and reflect more the organic material of that layer, than the current surface carbon dynamics.

Seasonal movements, winter range use, and migratory connectivity of the Black Oystercatcher

USGS Publications Warehouse

Johnson, Matthew; Clarkson, Peter; Goldstein, Michael I.; Haig, Susan M.; Lanctot, Richard B.; Tessler, David F.; Zwiefelhofer, Denny

2010-01-01

The Black Oystercatcher (Haematopus bachmani) is an intertidal obligate along North America's Pacific coast and a species of high conservation concern (population size 8900–11 000 individuals). Understanding birds' movements and space use throughout the annual cycle has become paramount in the face of changing environmental conditions, and intertidal species may be particularly vulnerable to habitat change due to anticipated sea-level rise associated with climate change and increasing coastal development. Conservation of the Black Oystercatcher is hindered by a lack of information on the species' nonbreeding distribution, seasonal movements, and habitat connectivity. Using satellite (n = 19) and VHF (n = 19) radio transmitters, we tracked Black Oystercatchers from five breeding sites (Vancouver Island, British Columbia; Kodiak Island, Prince William Sound, Middleton Island, and Juneau, Alaska) through one and one half annual cycles (May 2007–Dec 2008). We documented medium- to long-distance migration (range of migration distance 130–1667 km) in three populations (Prince William Sound, Middleton Island, and Juneau) and year-round residency in two others (Kodiak and Vancouver Island). We observed variation in the timing and length of migration by study site, and individual birds demonstrated fidelity to breeding and nonbreeding sites. We did not observe strong migratory connectivity. Migratory oystercatchers distributed themselves widely along the coasts of British Columbia and southeast Alaska during winter. Results provide baseline information on the Black Oystercatcher's movements and space use throughout the annual cycle.

Seasonal movements, winter range use, and migratory connectivity of the Black Oystercatcher

USGS Publications Warehouse

Johnson, M.; Clarkson, P.; Goldstein, M.I.; Haig, S.M.; Lanctot, Richard B.; Tessler, D.F.; Zwiefelhofer, D.

2010-01-01

The Black Oystercatcher (Haematopus bachmani) is an intertidal obligate along North America's Pacific coast and a species of high conservation concern (population size 8900-11 000 individuals). Understanding birds' movements and space use throughout the annual cycle has become paramount in the face of changing environmental conditions, and intertidal species may be particularly vulnerable to habitat change due to anticipated sea-level rise associated with climate change and increasing coastal development. Conservation of the Black Oystercatcher is hindered by a lack of information on the species' nonbreeding distribution, seasonal movements, and habitat connectivity. Using satellite (n = 19) and VHF (n = 19) radio transmitters, we tracked Black Oystercatchers from five breeding sites (Vancouver Island, British Columbia; Kodiak Island, Prince William Sound, Middleton Island, and Juneau, Alaska) through one and one half annual cycles (May 2007-Dec 2008). We documented medium- to long-distance migration (range of migration distance 130-1667 km) in three populations (Prince William Sound, Middleton Island, and Juneau) and year-round residency in two others (Kodiak and Vancouver Island). We observed variation in the timing and length of migration by study site, and individual birds demonstrated fidelity to breeding and nonbreeding sites. We did not observe strong migratory connectivity. Migratory oystercatchers distributed themselves widely along the coasts of British Columbia and southeast Alaska during winter. Results provide baseline information on the Black Oystercatcher's movements and space use throughout the annual cycle. ?? 2010 The Cooper Ornithological Society.

Dealing with Time in Health Economic Evaluation: Methodological Issues and Recommendations for Practice.

PubMed

O'Mahony, James F; Newall, Anthony T; van Rosmalen, Joost

2015-12-01

Time is an important aspect of health economic evaluation, as the timing and duration of clinical events, healthcare interventions and their consequences all affect estimated costs and effects. These issues should be reflected in the design of health economic models. This article considers three important aspects of time in modelling: (1) which cohorts to simulate and how far into the future to extend the analysis; (2) the simulation of time, including the difference between discrete-time and continuous-time models, cycle lengths, and converting rates and probabilities; and (3) discounting future costs and effects to their present values. We provide a methodological overview of these issues and make recommendations to help inform both the conduct of cost-effectiveness analyses and the interpretation of their results. For choosing which cohorts to simulate and how many, we suggest analysts carefully assess potential reasons for variation in cost effectiveness between cohorts and the feasibility of subgroup-specific recommendations. For the simulation of time, we recommend using short cycles or continuous-time models to avoid biases and the need for half-cycle corrections, and provide advice on the correct conversion of transition probabilities in state transition models. Finally, for discounting, analysts should not only follow current guidance and report how discounting was conducted, especially in the case of differential discounting, but also seek to develop an understanding of its rationale. Our overall recommendations are that analysts explicitly state and justify their modelling choices regarding time and consider how alternative choices may impact on results.

How does a viviparous semifossorial lizard reproduce? Ophiodes intermedius (Squamata: Anguidae) from subtropical climate in the Wet Chaco region of Argentina.

PubMed

Ortiz, Martín A; Boretto, Jorgelina M; Ibargüengoytía, Nora R

2017-04-01

The best predictors of reproductive patterns are commonly associated with climate factors, but evolutionary history also plays an important role. The semifossorial and viviparous lizard Ophiodes intermedius from the Wet Chaco region of Argentina showed an annual cycle with asynchrony between males and females and an unusual pattern for subtropical climates, with vitellogenesis beginning in autumn, ovulation and copulation in spring, and births occurring in summer. Males exhibited annual variation of testicular size associated with spermatogenic activity, reaching their maximum gonadal activity in late summer (March), but sperm storage in the epididymis and/or deferent duct occurred throughout the year. Females showed an extended reproductive cycle beginning in mid-autumn (May) with vitellogenesis and finishing with births from late spring to mid-summer (December to February). Litter size varied from 4 to 9 offspring. Females reached sexual maturity at a larger snout-vent length and, overall, showed greater body size than males, while males exhibited larger heads than females. Fat body cycles indicated that females use lipid reserves to support vitellogenesis and embryo development, while males allocate lipid resources to the search for females, courtship and copulation rather than to gametogenesis. Ophiodes intermedius differed from other species of the genus in litter size, gestation period, timing of birth and the minimum size at sexual maturity, probably as a result of the influence of ecological, historical and phylogenetic factors. Copyright © 2017 Elsevier GmbH. All rights reserved.

A complete VLBI delay model for deforming radio telescopes: the Effelsberg case

NASA Astrophysics Data System (ADS)

Artz, T.; Springer, A.; Nothnagel, A.

2014-12-01

Deformations of radio telescopes used in geodetic and astrometric very long baseline interferometry (VLBI) observations belong to the class of systematic error sources which require correction in data analysis. In this paper we present a model for all path length variations in the geometrical optics of radio telescopes which are due to gravitational deformation. The Effelsberg 100 m radio telescope of the Max Planck Institute for Radio Astronomy, Bonn, Germany, has been surveyed by various terrestrial methods. Thus, all necessary information that is needed to model the path length variations is available. Additionally, a ray tracing program has been developed which uses as input the parameters of the measured deformations to produce an independent check of the theoretical model. In this program as well as in the theoretical model, the illumination function plays an important role because it serves as the weighting function for the individual path lengths depending on the distance from the optical axis. For the Effelsberg telescope, the biggest contribution to the total path length variations is the bending of the main beam located along the elevation axis which partly carries the weight of the paraboloid at its vertex. The difference in total path length is almost 100 mm when comparing observations at 90 and at 0 elevation angle. The impact of the path length corrections is validated in a global VLBI analysis. The application of the correction model leads to a change in the vertical position of mm. This is more than the maximum path length, but the effect can be explained by the shape of the correction function.

33 CFR 157.150 - Crude Oil Washing Operations and Equipment Manual: Recording information after inspections.

Code of Federal Regulations, 2011 CFR

2011-07-01

... machines. (2) Revolutions, number of cycles, and length of cycles of each COW machine. (3) Pressure and... in each cargo tank. (5) Volume of water used for water rinsing. (6) Trim conditions of the tank...

33 CFR 157.150 - Crude Oil Washing Operations and Equipment Manual: Recording information after inspections.

Code of Federal Regulations, 2012 CFR

2012-07-01

... machines. (2) Revolutions, number of cycles, and length of cycles of each COW machine. (3) Pressure and... in each cargo tank. (5) Volume of water used for water rinsing. (6) Trim conditions of the tank...

33 CFR 157.150 - Crude Oil Washing Operations and Equipment Manual: Recording information after inspections.

Code of Federal Regulations, 2013 CFR

2013-07-01

... machines. (2) Revolutions, number of cycles, and length of cycles of each COW machine. (3) Pressure and... in each cargo tank. (5) Volume of water used for water rinsing. (6) Trim conditions of the tank...

33 CFR 157.150 - Crude Oil Washing Operations and Equipment Manual: Recording information after inspections.

Code of Federal Regulations, 2014 CFR

2014-07-01

... machines. (2) Revolutions, number of cycles, and length of cycles of each COW machine. (3) Pressure and... in each cargo tank. (5) Volume of water used for water rinsing. (6) Trim conditions of the tank...

Sequential measurements of serum matrix metalloproteinase 9 to monitor chemotherapy responses in patients with advanced non-small-cell lung cancer.

PubMed

Qiao, Xiaojuan; Zhai, Xiaoran; Wang, Jinghui; Zhao, Xiaoting; Yang, Xinjie; Lv, Jialin; Ma, Li; Zhang, Lina; Wang, Yue; Zhang, Shucai; Yue, Wentao

2016-01-01

Matrix metalloproteinase 9 (MMP-9) plays an important role in tumor invasion and metastasis, including lung cancer. However, whether variations in serum MMP-9 levels can serve as a biomarker for monitoring chemotherapy curative effect remains unclear. This study was designed to investigate the association between variations in serum MMP-9 levels and chemotherapy curative effect in patients with lung cancer. A total of 82 patients with advanced lung cancer were included. All newly diagnosed patients were treated with platinum-based doublet chemotherapy. Serial measurements of serum MMP-9 levels were performed by enzyme-linked immunosorbent assay. In this manner, we chose four time points to examine the association, including before chemotherapy, and 3 weeks after the beginning of the first, second, and fourth cycles of chemotherapy. Compared with the serum level of MMP-9 before progressive disease, patients with progressive disease had elevated serum levels of MMP-9. Compared with the previous time point of collecting specimens, the serum levels of MMP-9 in the patients with a complete response/partial response/stable disease decreased or were maintained stable. The differences of variation in serum MMP-9 levels in patients with different chemotherapy curative effects were all statistically significant after one cycle, two cycles, and four cycles (after one cycle: P<0.001; after two cycles: P<0.001; after four cycles: P=0.01). However, patients with small-cell lung cancer did not exhibit similar test results. The variation in serum MMP-9 levels in patients with non-small-cell lung cancer during chemotherapy was closely related to chemotherapy curative effect and could be useful to monitor chemotherapy curative effect for a small portion of patients.

The Effects of Predator Evolution and Genetic Variation on Predator-Prey Population-Level Dynamics.

PubMed

Cortez, Michael H; Patel, Swati

2017-07-01

This paper explores how predator evolution and the magnitude of predator genetic variation alter the population-level dynamics of predator-prey systems. We do this by analyzing a general eco-evolutionary predator-prey model using four methods: Method 1 identifies how eco-evolutionary feedbacks alter system stability in the fast and slow evolution limits; Method 2 identifies how the amount of standing predator genetic variation alters system stability; Method 3 identifies how the phase lags in predator-prey cycles depend on the amount of genetic variation; and Method 4 determines conditions for different cycle shapes in the fast and slow evolution limits using geometric singular perturbation theory. With these four methods, we identify the conditions under which predator evolution alters system stability and shapes of predator-prey cycles, and how those effect depend on the amount of genetic variation in the predator population. We discuss the advantages and disadvantages of each method and the relations between the four methods. This work shows how the four methods can be used in tandem to make general predictions about eco-evolutionary dynamics and feedbacks.

Role of medium heterogeneity and viscosity contrast in miscible flow regimes and mixing zone growth: A computational pore-scale approach

NASA Astrophysics Data System (ADS)

Afshari, Saied; Hejazi, S. Hossein; Kantzas, Apostolos

2018-05-01

Miscible displacement of fluids in porous media is often characterized by the scaling of the mixing zone length with displacement time. Depending on the viscosity contrast of fluids, the scaling law varies between the square root relationship, a sign for dispersive transport regime during stable displacement, and the linear relationship, which represents the viscous fingering regime during an unstable displacement. The presence of heterogeneities in a porous medium significantly affects the scaling behavior of the mixing length as it interacts with the viscosity contrast to control the mixing of fluids in the pore space. In this study, the dynamics of the flow and transport during both unit and adverse viscosity ratio miscible displacements are investigated in heterogeneous packings of circular grains using pore-scale numerical simulations. The pore-scale heterogeneity level is characterized by the variations of the grain diameter and velocity field. The growth of mixing length is employed to identify the nature of the miscible transport regime at different viscosity ratios and heterogeneity levels. It is shown that as the viscosity ratio increases to higher adverse values, the scaling law of mixing length gradually shifts from dispersive to fingering nature up to a certain viscosity ratio and remains almost the same afterwards. In heterogeneous media, the mixing length scaling law is observed to be generally governed by the variations of the velocity field rather than the grain size. Furthermore, the normalization of mixing length temporal plots with respect to the governing parameters of viscosity ratio, heterogeneity, medium length, and medium aspect ratio is performed. The results indicate that mixing length scales exponentially with log-viscosity ratio and grain size standard deviation while the impact of aspect ratio is insignificant. For stable flows, mixing length scales with the square root of medium length, whereas it changes linearly with length during unstable flows. This scaling procedure allows us to describe the temporal variation of mixing length using a generalized curve for various combinations of the flow conditions and porous medium properties.

Common determinants of body size and eye size in chickens from an advanced intercross line.

PubMed

Prashar, Ankush; Hocking, Paul M; Erichsen, Jonathan T; Fan, Qiao; Saw, Seang Mei; Guggenheim, Jeremy A

2009-06-15

Myopia development is characterised by an increased axial eye length. Therefore, identifying factors that influence eye size may provide new insights into the aetiology of myopia. In humans, axial length is positively correlated to height and weight, and in mice, eye weight is positively correlated with body weight. The purpose of this study was to examine the relationship between eye size and body size in chickens from a genetic cross in which alleles with major effects on eye and body size were segregating. Chickens from a cross between a layer line (small body size and eye size) and a broiler line (large body and eye size) were interbred for 10 generations so that alleles for eye and body size would have the chance to segregate independently. At 3 weeks of age, 510 chicks were assessed using in vivo high resolution A-scan ultrasonography and keratometry. Equatorial eye diameter and eye weight were measured after enucleation. The variations in eye size parameters that could be explained by body weight (BW), body length (BL), head width (HW) and sex were examined using multiple linear regression. It was found that BW, BL and HW and sex together predicted 51-56% of the variation in eye weight, axial length, corneal radius, and equatorial eye diameter. By contrast, the same variables predicted only 22% of the variation in lens thickness. After adjusting for sex, the three body size parameters predicted 45-49% of the variation in eye weight, axial length, corneal radius, and eye diameter, but only 0.4% of the variation in lens thickness. In conclusion, about half of the variation in eye size in the chickens of this broiler-layer advanced intercross line is likely to be determined by pleiotropic genes that also influence body size. Thus, mapping the quantitative trait loci (QTL) that determine body size may be useful in understanding the genetic determination of eye size (a logical inference of this result is that the 20 or more genetic variants that have recently been shown to influence human height may also be found to influence axial eye length). Furthermore, adjusting for body size will be essential in mapping pure eye size QTL in this chicken population, and may also have value in mapping eye size QTL in humans.

Fuel cycle cost reduction through Westinghouse fuel design and core management

DOE Office of Scientific and Technical Information (OSTI.GOV)

Frank, F.J.; Scherpereel, L.R.

1985-11-01

This paper describes advances in Westinghouse nuclear fuel and their impact on fuel cycle cost. Recent fabrication development has been aimed at maintaining high integrity, increased operating flexibility, longer operating cycles, and improved core margins. Development efforts at Westinghouse toward meeting these directions have culminated in VANTAGE 5 fuel. The current trend toward longer operating cycles provides a further driving force to minimize the resulting inherent increase in fuel cycle costs by further increases in region discharge burnup. Westinghouse studies indicate the capability of currently offered products to meet cycle lengths up to 24 months.

Women's attitudes about menstruation and associated health and behavioral characteristics.

PubMed

Morrison, Lynn A; Larkspur, Louona; Calibuso, Marites J; Brown, Susan

2010-01-01

To examine the relationships between attitudes towards menstruation, health, and behavioral characteristics. The 136 women who completed questionnaires varied in their sexual activity, sexual orientation, and use of hormonal contraception. Women's estimated cycle length was accurate when compared to observed cycle length (F (3,156) = .05; P = .98). Smokers had decreased durations of flow (P < .01). Depo-Provera users were less likely to view menstruation as natural compared to abstinent, sexually active heterosexuals or those using traditional oral contraception (F (5,141) = 2.43; P = .04). Hormonal contraception use, but not sexual orientation, was associated with attitudes about menstruation.

Proper orthogonal decomposition analysis for cycle-to-cycle variations of engine flow. Effect of a control device in an inlet pipe

NASA Astrophysics Data System (ADS)

Vu, Trung-Thanh; Guibert, Philippe

2012-06-01

This paper aims to investigate cycle-to-cycle variations of non-reacting flow inside a motored single-cylinder transparent engine in order to judge the insertion amplitude of a control device able to displace linearly inside the inlet pipe. Three positions corresponding to three insertion amplitudes are implemented to modify the main aerodynamic properties from one cycle to the next. Numerous particle image velocimetry (PIV) two-dimensional velocity fields following cycle database are post-treated to discriminate specific contributions of the fluctuating flow. We performed a multiple snapshot proper orthogonal decomposition (POD) in the tumble plane of a pent roof SI engine. The analytical process consists of a triple decomposition for each instantaneous velocity field into three distinctive parts named mean part, coherent part and turbulent part. The 3rd- and 4th-centered statistical moments of the proper orthogonal decomposition (POD)-filtered velocity field as well as the probability density function of the PIV realizations proved that the POD extracts different behaviors of the flow. Especially, the cyclic variability is assumed to be contained essentially in the coherent part. Thus, the cycle-to-cycle variations of the engine flows might be provided from the corresponding POD temporal coefficients. It has been shown that the in-cylinder aerodynamic dispersions can be adapted and monitored by controlling the insertion depth of the control instrument inside the inlet pipe.

Deep sulfur cycle

NASA Astrophysics Data System (ADS)

Shimizu, N.; Mandeville, C. W.

2009-12-01

Geochemical cycle of sulfur in near-surface reservoirs has been a subject of intense studies for decades. It has been shown that sulfur isotopic compositions of sedimentary sulfides and sulfates record interactions of the atmosphere, hydrosphere, biosphere and lithosphere, with δ34S of sedimentary sulfides continuously decreasing from 0‰ toward present-day values of ~-30 to -40‰ over the Phanerozoic (e.g., Canfield, 2004). It has also been shown that microbial reduction of the present-day seawater sulfate (δ34S=+21‰) results in large shifts in isotopic compositions of secondary pyrites in altered oceanic crust (to δ34S=-70‰: Rouxel et al., 2009). How much of these near surface isotopic variations survive during deep geochemical cycle of sulfur interacting with the mantle infinite reservoir with δ34S=0‰? Could extent of their survival be used as a tracer of processes and dynamics involved in deep geochemical cycle? As a first step toward answering these questions, δ34S was determined in-situ using a Cameca IMS 1280 ion microprobe at Woods Hole Oceanographic Institution in materials representing various domains of deep geochemical cycle. They include pyrites in altered MORB as potential subducting materials and pyrites in UHP eclogites as samples that have experienced subduction zone processes, and mantle-derived melts are represented by olivine-hosted melt inclusions in MORB and those in IAB, and undegassed submarine OIB glasses. Salient features of the results include: (1) pyrites in altered MORB (with O. Rouxel; from ODP site 801 and ODP Hole 1301B) range from -70 to +19‰, (2) pyrites in UHP eclogites from the Western Gneiss Region, Norway (with B. Hacker and A. Kylander-Clark) show a limited overall range from -3.4 to + 2.8‰ among five samples, with one of them covering almost the entire range, indicating limited scale lengths of isotopic equilibration during subduction, (3) olivine-hosted melt inclusions in arc basalts from Galunggung (-2.8 - +5.2‰ with majority between +3 and +5), Krakatau (+1.5 - +8.6‰ with a cluster around +3 - +5), and Augustine (+8 - +12‰) show larger variations among arc magmas than previously known, (4) olivine-hosted melt inclusions from a FAMOUS lava (519-4-1) range from -9.5 to +10.5‰, and (5) undegassed submarine glasses from Samoa (with M. Jackson) appear to show separate ranges for individual islands, including Vailulu clustering around -1.9 to +2.1‰ and Malumalu ranging from -0.9 to -12.1‰. Overall, the results clearly show that low temperature signatures are not completely erased during recycling and isotopic exchange with the mantle infinite reservoir, and that mantle-derived melts still display large isotopic variations for small sampling scales, similar to observations on other isotope systems. Canfield, D. E. (2004) Amer. Jour. Sci., 304, 839-861. Rouxel, O. et al., (2009) Goldschmidt Conf. Abstract.

Foot Placement Characteristics and Plantar Pressure Distribution Patterns during Stepping on Ground in Neonates

PubMed Central

Sylos-Labini, F.; Magnani, S.; Cappellini, G.; La Scaleia, V.; Fabiano, A.; Picone, S.; Paolillo, P.; Di Paolo, A.; Lacquaniti, F.; Ivanenko, Y.

2017-01-01

Stepping on ground can be evoked in human neonates, though it is rather irregular and stereotyped heel-to-toe roll-over pattern is lacking. Such investigations can provide insights into the role of contact- or load-related proprioceptive feedback during early development of locomotion. However, the detailed characteristics of foot placements and their association with motor patterns are still incompletely documented. We elicited stepping in 33 neonates supported on a table. Unilateral limb kinematics, bilateral plantar pressure distribution and EMG activity from up to 11 ipsilateral leg muscles were recorded. Foot placement characteristics in neonates showed a wide variation. In ~25% of steps, the swinging foot stepped onto the contralateral foot due to generally small step width. In the remaining steps with separate foot placements, the stance phase could start with forefoot (28%), midfoot (47%), or heel (25%) touchdowns. Despite forefoot or heel initial contacts, the kinematic and loading patterns markedly differed relatively to toe-walking or adult-like two-peaked vertical force profile. Furthermore, while the general stepping parameters (cycle duration, step length, range of motion of proximal joints) were similar, the initial foot contact was consistently associated with specific center-of-pressure excursion, range of motion in the ankle joint, and the center-of-activity of extensor muscles (being shifted by ~5% of cycle toward the end of stance in the “heel” relative to “forefoot” condition). In sum, we found a variety of footfall patterns in conjunction with associated changes in motor patterns. These findings suggest the potential contribution of load-related proprioceptive feedback and/or the expression of variations in the locomotor program already during early manifestations of stepping on ground in human babies. PMID:29066982

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harris, N.R.P.

The total column ozone data for many Dobson stations are examined for the existence of long-term changes, principally in the period 1965 to 1986. Analysis of the measurements taken at Arosa, Switzerland from August 1931 to July 1988 reveals a statistically significant wintertime loss in recent years of about 6 percent compared to historic values. Examination of data from several other ground stations gave similar results, and in addition incongruous features were found in many of the published records. Bojkov (1987/8) produced a set of provisionally revised data by adjusting the data using information about the Dobson instrument calibrations mademore » available by the individual stations. Similar wintertime losses are found in an analysis of this provisionally revised set of data as are found in the published data. Multiple regression analyses were performed using a model which seeks trends on a monthly basis after allowance for the effects of the solar cycle and the quasi-biennial oscillation. Sensitivity studies are presented which show the robustness of these results to such factors as the length of time considered, the solar cycle, the injection of nitrogen oxides by the nuclear bomb tests which were carried out in the atmosphere in the early 1960s, and the assumed nature of the loss. The seasonal and the latitudinal variations of these losses are qualitatively similar to the predictions of the current 2-D photochemical models of the atmosphere. However the observed losses are greater than the predicted losses by as much as a factor of four at 60 deg N in winter. Finally there is some evidence for longitudinal variations in both the observed trends and in the observed response of total ozone to the atmospheric bomb tests of the early 1960s.« less

Impacts of root traits and genotypic diversity in switchgrass cropping systems on biogeochemical cycling of soil carbon and nitrogen

NASA Astrophysics Data System (ADS)

De Graaff, M. A.; Jastrow, J. D.; Adkins, J.; Johns, A. C.; Morris, G.; Six, J.

2016-12-01

Land-use change for bioenergy production can create greenhouse gas (GHG) emissions through disturbance of soil carbon (C) pools, but native species with extensive root systems may rapidly repay the GHG debt by enhancing soil C sequestration upon land-use change, particularly when grown in diverse mixtures. Here we investigated how root traits and genotypic diversity in switchgrass (Panicum virgatum) impacts yield, nitrogen (N) cycling and soil C stabilization. Owing to extensive within-species variation in root morphology and architecture among the switchgrass cultivars, we hypothesized that increasing cultivar diversity would enhance belowground niche differentiation, thereby increasing N use efficiency, yield, and ultimately soil C stabilization. Our experiment was conducted at the Fermilab National Environmental Research Park, in northeastern Illinois, USA, where we varied the level of switchgrass genotypic diversity using various local and non-local cultivars (1, 2, 4, or 6 cultivars per plot) in a replicated field trial. We found that genotypic mixtures had one-third higher biomass production than the average monoculture, and no monoculture was significantly higher yielding than the average mixture. Further, year-to-year variation in yields was reduced in the mixture of switchgrass relative to the species monocultures. Despite positive impacts of increased intraspecific diversity on biomass production, we found no effect on N use efficiency, or soil C sequestration. However there were differences among cultivars in soil C input and soil C stabilization. These differences were related to specific root length (SRL), where greater SRL was accompanied by more root-derived soil C. Our findings suggest SRL is a root trait that affects soil C input, and that genotypic mixtures could help provide high, stable yields of high-quality biomass feedstocks.

Fatigue during maximal sprint cycling: unique role of cumulative contraction cycles.

PubMed

Tomas, Aleksandar; Ross, Emma Z; Martin, James C

2010-07-01

Maximal cycling power has been reported to decrease more rapidly when performed with increased pedaling rates. Increasing pedaling rate imposes two constraints on the neuromuscular system: 1) decreased time for muscle excitation and relaxation and 2) increased muscle shortening velocity. Using two crank lengths allows the effects of time and shortening velocity to be evaluated separately. We conducted this investigation to determine whether the time available for excitation and relaxation or the muscle shortening velocity was mainly responsible for the increased rate of fatigue previously observed with increased pedaling rates and to evaluate the influence of other possible fatiguing constraints. Seven trained cyclists performed 30-s maximal isokinetic cycling trials using two crank lengths: 120 and 220 mm. Pedaling rate was optimized for maximum power for each crank length: 135 rpm for the 120-mm cranks (1.7 m x s(-1) pedal speed) and 109 rpm for the 220-mm cranks (2.5 m x s(-1) pedal speed). Power was recorded with an SRM power meter. Crank length did not affect peak power: 999 +/- 276 W for the 120-mm crank versus 1001 +/- 289 W for the 220-mm crank. Fatigue index was greater (58.6% +/- 3.7% vs 52.4% +/- 4.8%, P < 0.01), and total work was less (20.0 +/- 1.8 vs 21.4 +/- 2.0 kJ, P < 0.01) with the higher pedaling rate-shorter crank condition. Regression analyses indicated that the power for the two conditions was most highly related to cumulative work (r2 = 0.94) and to cumulative cycles (r2 = 0.99). These results support previous findings and confirm that pedaling rate, rather than pedal speed, was the main factor influencing fatigue. Our novel result was that power decreased by a similar increment with each crank revolution for the two conditions, indicating that each maximal muscular contraction induced a similar amount of fatigue.

The effects of early hypo- and hyperthyroidism on the development of rat cerebellar cortex. III. Kinetics of cell proliferation in the external granular layer.

PubMed

Lauder, J M

1977-04-22

The effects of early hypo- and hyperthyroidism on the rates of cell acquisition and proliferation have been studied in the external granular layer (EGL) of the developing rat cerebellar cortex at 10 days of age using quantitative autoradiographic methods. Both altered thyroid states reduce the rate of cell acquisition in the EGL, but appear to do so for different reasons. Hyperthyroidism shortens the average length of the cell cycle by decreasing the duration of the pre-DNA synthetic phase (G1), indicating that excess thyroxine may exert a direct effect on the EGL. This action involves the early onset of neuronal differentiation (cessation of proliferation)46 which presumably leads to the observed decrease in the rate of cell acquisition (increased doubling time). Such differentiating cells do not, however, leave the proliferative zone or the EGL prematurely, resulting in a reduced labeling index, mitotic index, and growth fraction as non-dividing cells dilute the proliferating cell population. Hypothyroidism, on the other hand, leads to no significant change in the length of the cell cycle or in the mitotic index, but causes a decreased labeling index and growth fraction, as well as a reduced rate of cell acquisition (increased doubling time). No significant change in the amount of cell death in the EGL could be found to explain this apparent discrepancy between the rate of cell proliferation (cell cycle length) and cell acqusiition. The answer to this puzzle appears to lie in the mitotic index, which is not affected to the same extent as the labeling index, although it is also slightly reduced. If cells were to remain longer in mitosis, this could result in a decreased labeling index and growth fraction but nearly normal mitotic index and cell cycle length (as measured using the % labeled mitoses method), since those cells dropping out of the cycling population would be counted as mitoses...

Association mapping of starch chain length distribution and amylose content in pea (Pisum sativum L.) using carbohydrate metabolism candidate genes.

PubMed

Carpenter, Margaret A; Shaw, Martin; Cooper, Rebecca D; Frew, Tonya J; Butler, Ruth C; Murray, Sarah R; Moya, Leire; Coyne, Clarice J; Timmerman-Vaughan, Gail M

2017-08-01

Although starch consists of large macromolecules composed of glucose units linked by α-1,4-glycosidic linkages with α-1,6-glycosidic branchpoints, variation in starch structural and functional properties is found both within and between species. Interest in starch genetics is based on the importance of starch in food and industrial processes, with the potential of genetics to provide novel starches. The starch metabolic pathway is complex but has been characterized in diverse plant species, including pea. To understand how allelic variation in the pea starch metabolic pathway affects starch structure and percent amylose, partial sequences of 25 candidate genes were characterized for polymorphisms using a panel of 92 diverse pea lines. Variation in the percent amylose composition of extracted seed starch and (amylopectin) chain length distribution, one measure of starch structure, were characterized for these lines. Association mapping was undertaken to identify polymorphisms associated with the variation in starch chain length distribution and percent amylose, using a mixed linear model that incorporated population structure and kinship. Associations were found for polymorphisms in seven candidate genes plus Mendel's r locus (which conditions the round versus wrinkled seed phenotype). The genes with associated polymorphisms are involved in the substrate supply, chain elongation and branching stages of the pea carbohydrate and starch metabolic pathways. The association of polymorphisms in carbohydrate and starch metabolic genes with variation in amylopectin chain length distribution and percent amylose may help to guide manipulation of pea seed starch structural and functional properties through plant breeding.

Postcopulatory Sexual Selection Results in Spermatozoa with More Uniform Head and Flagellum Sizes in Rodents

PubMed Central

Varea-Sánchez, María; Gómez Montoto, Laura; Tourmente, Maximiliano; Roldan, Eduardo R. S.

2014-01-01

Interspecific comparative studies have shown that, in most taxa, postcopulatory sexual selection (PCSS) in the form of sperm competition drives the evolution of longer and faster swimming sperm. Work on passserine birds has revealed that PCSS also reduces variation in sperm size between males at the intraspecific level. However, the influence of PCSS upon intra-male sperm size diversity is poorly understood, since the few studies carried out to date in birds have yielded contradictory results. In mammals, PCSS increases sperm size but there is little information on the effects of this selective force on variations in sperm size and shape. Here, we test whether sperm competition associates with a reduction in the degree of variation of sperm dimensions in rodents. We found that as sperm competition levels increase males produce sperm that are more similar in both the size of the head and the size of the flagellum. On the other hand, whereas with increasing levels of sperm competition there is less variation in head length in relation to head width (ratio CV head length/CV head width), there is no relation between variation in head and flagellum sizes (ratio CV head length/CV flagellum length). Thus, it appears that, in addition to a selection for longer sperm, sperm competition may select more uniform sperm heads and flagella, which together may enhance swimming velocity. Overall, sperm competition seems to drive sperm components towards an optimum design that may affect sperm performance which, in turn, will be crucial for successful fertilization. PMID:25243923

Birth month associations with height, head circumference, and limb lengths among Peruvian children.

PubMed

Pomeroy, Emma; Wells, Jonathan C K; Stanojevic, Sanja; Miranda, J Jaime; Cole, Tim J; Stock, Jay T

2014-05-01

Associations between season of birth and body size, morbidity, and mortality have been widely documented, but it is unclear whether different parts of the body are differentially sensitive, and if such effects persist through childhood. This may be relevant to understanding the relationship between early life environment and body size and proportions. We investigated associations between birth month and anthropometry among rural highland (n = 162) and urban lowland (n = 184) Peruvian children aged 6 months to 8 years. Stature; head-trunk height; total limb, ulna, tibia, hand, and foot lengths; head circumference; and limb measurements relative to head-trunk height were converted to internal age-sex-specific z scores. Lowland and highland datasets were then analyzed separately for birth month trends using cosinor analysis, as urban conditions likely provide a more consistent environment compared with anticipated seasonal variation in the rural highlands. Among highland children birth month associations were significant most strongly for tibia length, followed by total lower limb length and stature, with a peak among November births. Results were not significant for other measurements or among lowland children. The results suggest a prenatal or early postnatal environmental effect on growth that is more marked in limb lengths than trunk length or head size, and persists across the age range studied. We suggest that the results may reflect seasonal variation in maternal nutrition in the rural highlands, but other hypotheses such as variation in maternal vitamin D levels cannot be excluded. Copyright © 2014 Wiley Periodicals, Inc.

Is telomere length a molecular marker of past thermal stress in wild fish?

PubMed

Debes, Paul V; Visse, Marko; Panda, Bineet; Ilmonen, Petteri; Vasemägi, Anti

2016-11-01

Telomeres protect eukaryotic chromosomes; variation in telomere length has been linked (primarily in homoeothermic animals) to variation in stress, cellular ageing and disease risk. Moreover, telomeres have been suggested to function as biomarker for quantifying past environmental stress, but studies in wild animals remain rare. Environmental stress, such as extreme environmental temperatures in poikilothermic animals, may result in oxidative stress that accelerates telomere attrition. However, growth, which may depend on temperature, can also contribute to telomere attrition. To test for associations between multitissue telomere length and past water temperature while accounting for the previous individual growth, we used quantitative PCR to analyse samples from 112 young-of-the-year brown trout from 10 natural rivers with average water temperature differences of up to 6°C (and an absolute maximum of 23°C). We found negative associations between relative telomere length (RTL) and both average river temperature and individual body size. We found no indication of RTL-temperature association differences among six tissues, but we did find indications for differences among the tissues for associations between RTL and body size; size trends, albeit nonsignificant in their differences, were strongest in muscle and weakest in fin. Although causal relationships among temperature, growth, oxidative stress, and cross-sectional telomere length remain largely unknown, our results indicate that telomere-length variation in a poikilothermic wild animal is associated with both past temperature and growth. © 2016 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

SUN-LIKE MAGNETIC CYCLES IN THE RAPIDLY ROTATING YOUNG SOLAR ANALOG HD 30495

DOE Office of Scientific and Technical Information (OSTI.GOV)

Egeland, Ricky; Metcalfe, Travis S.; Hall, Jeffrey C.

A growing body of evidence suggests that multiple dynamo mechanisms can drive magnetic variability on different timescales, not only in the Sun but also in other stars. Many solar activity proxies exhibit a quasi-biennial (∼2 year) variation, which is superimposed upon the dominant 11 year cycle. A well-characterized stellar sample suggests at least two different relationships between rotation period and cycle period, with some stars exhibiting long and short cycles simultaneously. Within this sample, the solar cycle periods are typical of a more rapidly rotating star, implying that the Sun might be in a transitional state or that it hasmore » an unusual evolutionary history. In this work, we present new and archival observations of dual magnetic cycles in the young solar analog HD 30495, a ∼1 Gyr old G1.5 V star with a rotation period near 11 days. This star falls squarely on the relationships established by the broader stellar sample, with short-period variations at ∼1.7 years and a long cycle of ∼12 years. We measure three individual long-period cycles and find durations ranging from 9.6 to 15.5 years. We find the short-term variability to be intermittent, but present throughout the majority of the time series, though its occurrence and amplitude are uncorrelated with the longer cycle. These essentially solar-like variations occur in a Sun-like star with more rapid rotation, though surface differential rotation measurements leave open the possibility of a solar equivalence.« less

Numerical investigation of over expanded flow behavior in a single expansion ramp nozzle

NASA Astrophysics Data System (ADS)

Mousavi, Seyed Mahmood; Pourabidi, Reza; Goshtasbi-Rad, Ebrahim

2018-05-01

The single expansion ramp nozzle is severely over-expanded when the vehicle is at low speed, which hinders its ability to provide optimal configurations for combined cycle engines. The over-expansion leads to flow separation as a result of shock wave/boundary-layer interaction. Flow separation, and the presence of shocks themselves, result in a performance loss in the single expansion ramp nozzle, leading to reduced thrust and increased pressure losses. In the present work, the unsteady two dimensional compressible flow in an over expanded single expansion ramp nozzle has been investigated using finite volume code. To achieve this purpose, the Reynolds stress turbulence model and full multigrid initialization, in addition to the Smirnov's method for examining the errors accumulation, have been employed and the results are compared with available experimental data. The results show that the numerical code is capable of predicting the experimental data with high accuracy. Afterward, the effect of discontinuity jump in wall temperature as well as the length of straight ramp on flow behavior have been studied. It is concluded that variations in wall temperature and length of straight ramp change the shock wave boundary layer interaction, shock structure, shock strength as well as the distance between Lambda shocks.

Metastability versus collapse following a quench in attractive Bose-Einstein condensates

NASA Astrophysics Data System (ADS)

Golde, Jake; Ruhl, Joanna; Olshanii, Maxim; Dunjko, Vanja; Datta, Sumita; Malomed, Boris A.

2018-05-01

We consider a Bose-Einstein condensate (BEC) with attractive two-body interactions in a cigar-shaped trap, initially prepared in its ground state for a given negative scattering length, which is quenched to a larger absolute value of the scattering length. Using the mean-field approximation, we compute numerically, for an experimentally relevant range of aspect ratios and initial strengths of the coupling, two critical values of quench. One corresponds to the weakest attraction strength, the quench to which causes the system to collapse before completing even a single return from the narrow configuration (pericenter) in its breathing cycle. The other is a similar critical point for the occurrence of collapse before completing two returns. In the latter case, we also compute the limiting value, as we keep increasing the strength of the postquench attraction towards its critical value, of the time interval between the first two pericenters. We also use a Gaussian variational model to estimate the critical quenched attraction strength below which the system is stable against the collapse for long times. These time intervals and critical attraction strengths, apart from being fundamental properties of nonlinear dynamics of self-attractive BECs, may provide clues to the design of upcoming experiments that are trying to create robust BEC breathers.

The influence of stem length and fixation on initial femoral component stability in revision total knee replacement

PubMed Central

Conlisk, N.; Gray, H.; Pankaj, P.; Howie, C. R.

2012-01-01

Objectives Orthopaedic surgeons use stems in revision knee surgery to obtain stability when metaphyseal bone is missing. No consensus exists regarding stem size or method of fixation. This in vitro study investigated the influence of stem length and method of fixation on the pattern and level of relative motion at the bone–implant interface at a range of functional flexion angles. Methods A custom test rig using differential variable reluctance transducers (DVRTs) was developed to record all translational and rotational motions at the bone–implant interface. Composite femurs were used. These were secured to permit variation in flexion angle from 0° to 90°. Cyclic loads were applied through a tibial component based on three peaks corresponding to 0°, 10° and 20° flexion from a normal walking cycle. Three different femoral components were investigated in this study for cementless and cemented interface conditions. Results Relative motions were found to increase with flexion angle. Stemmed implants reduced relative motions in comparison to stemless implants for uncemented constructs. Relative motions for cemented implants were reduced to one-third of their equivalent uncemented constructs. Conclusions Stems are not necessary for cemented implants when the metaphyseal bone is intact. Short cemented femoral stems confer as much stability as long uncemented stems. PMID:23610659

Detection and quantitation of single nucleotide polymorphisms, DNA sequence variations, DNA mutations, DNA damage and DNA mismatches

DOEpatents

McCutchen-Maloney, Sandra L.

2002-01-01

DNA mutation binding proteins alone and as chimeric proteins with nucleases are used with solid supports to detect DNA sequence variations, DNA mutations and single nucleotide polymorphisms. The solid supports may be flow cytometry beads, DNA chips, glass slides or DNA dips sticks. DNA molecules are coupled to solid supports to form DNA-support complexes. Labeled DNA is used with unlabeled DNA mutation binding proteins such at TthMutS to detect DNA sequence variations, DNA mutations and single nucleotide length polymorphisms by binding which gives an increase in signal. Unlabeled DNA is utilized with labeled chimeras to detect DNA sequence variations, DNA mutations and single nucleotide length polymorphisms by nuclease activity of the chimera which gives a decrease in signal.

Variable cycle control model for intersection based on multi-source information

NASA Astrophysics Data System (ADS)

Sun, Zhi-Yuan; Li, Yue; Qu, Wen-Cong; Chen, Yan-Yan

2018-05-01

In order to improve the efficiency of traffic control system in the era of big data, a new variable cycle control model based on multi-source information is presented for intersection in this paper. Firstly, with consideration of multi-source information, a unified framework based on cyber-physical system is proposed. Secondly, taking into account the variable length of cell, hysteresis phenomenon of traffic flow and the characteristics of lane group, a Lane group-based Cell Transmission Model is established to describe the physical properties of traffic flow under different traffic signal control schemes. Thirdly, the variable cycle control problem is abstracted into a bi-level programming model. The upper level model is put forward for cycle length optimization considering traffic capacity and delay. The lower level model is a dynamic signal control decision model based on fairness analysis. Then, a Hybrid Intelligent Optimization Algorithm is raised to solve the proposed model. Finally, a case study shows the efficiency and applicability of the proposed model and algorithm.

Integrated design of cryogenic refrigerator and liquid-nitrogen circulation loop for HTS cable

NASA Astrophysics Data System (ADS)

Chang, Ho-Myung; Ryu, Ki Nam; Yang, Hyung Suk

2016-12-01

A new concept of cryogenic cooling system is proposed and investigated for application to long-length HTS cables. One of major obstacles to the cable length of 1 km or longer is the difficulty in circulating liquid nitrogen (LN) along the cables, since the temperature rise and pressure drop of LN flow could be excessively large. This study attempts a breakthrough by integrating the refrigerator with the LN circulation loop in order to eliminate the cryogenic LN pumps, and generate a large LN flow with the power of compressors at ambient temperature. A variety of thermodynamic structures are investigated on standard and modified Claude cycles, where nitrogen is used as refrigerant and the LN circulation loop is included as part of the closed cycle. Four proposed cycles are fully analyzed and optimized with a process simulator (Aspen HYSYS) to evaluate the FOM (figure of merit) and examine the feasibility. The modified dual-pressure cycle cooled with expander stream is recommended for long HTS cables.

Giant panda (Ailuropoda melanoleuca) sperm morphometry and function after repeated freezing and thawing.

PubMed

Santiago-Moreno, J; Esteso, M C; Pradiee, J; Castaño, C; Toledano-Díaz, A; O'Brien, E; Lopez-Sebastián, A; Martínez-Nevado, E; Delclaux, M; Fernández-Morán, J; Zhihe, Z

2016-05-01

This work examines the effects of subsequent cycles of freezing-thawing on giant panda (Ailuropoda melanoleuca) sperm morphometry and function, and assesses whether density-gradient centrifugation (DGC) can increase the number of freezing-thawing cycles this sperm can withstand. A sperm sample was collected by electroejaculation from a mature giant panda and subjected to five freezing-thawing cycles. Although repeated freezing-thawing negatively affected (P < 0.05) sperm motility and membrane integrity, in both nonselected and DCG-selected sperm samples, >60% of the sperm cells in both treatments showed acrosome integrity even after the fifth freezing cycle. In fresh semen, the sperm head length was 4.7 μm, the head width 3.6 μm, area 14.3 μm(2) and perimeter length 14.1 μm. The present results suggest that giant panda sperm trends to be resistant to repeated freezing-thawing, even without DGC selection. © 2015 Blackwell Verlag GmbH.

Temporal and Spatial Variation in Peatland Carbon Cycling and Implications for Interpreting Responses of an Ecosystem-Scale Warming Experiment

DOE PAGES

Griffiths, Natalie A.; Hanson, Paul J.; Ricciuto, Daniel M.; ...

2017-11-22

Here, we are conducting a large-scale, long-term climate change response experiment in an ombrotrophic peat bog in Minnesota to evaluate the effects of warming and elevated CO 2 on ecosystem processes using empirical and modeling approaches. To better frame future assessments of peatland responses to climate change, we characterized and compared spatial vs. temporal variation in measured C cycle processes and their environmental drivers. We also conducted a sensitivity analysis of a peatland C model to identify how variation in ecosystem parameters contributes to model prediction uncertainty. High spatial variability in C cycle processes resulted in the inability to determinemore » if the bog was a C source or sink, as the 95% confidence interval ranged from a source of 50 g C m –2 yr –1 to a sink of 67 g C m –2 yr –1. Model sensitivity analysis also identified that spatial variation in tree and shrub photosynthesis, allocation characteristics, and maintenance respiration all contributed to large variations in the pretreatment estimates of net C balance. Variation in ecosystem processes can be more thoroughly characterized if more measurements are collected for parameters that are highly variable over space and time, and especially if those measurements encompass environmental gradients that may be driving the spatial and temporal variation (e.g., hummock vs. hollow microtopographies, and wet vs. dry years). Together, the coupled modeling and empirical approaches indicate that variability in C cycle processes and their drivers must be taken into account when interpreting the significance of experimental warming and elevated CO 2 treatments.« less

Temporal and Spatial Variation in Peatland Carbon Cycling and Implications for Interpreting Responses of an Ecosystem-Scale Warming Experiment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Griffiths, Natalie A.; Hanson, Paul J.; Ricciuto, Daniel M.

Here, we are conducting a large-scale, long-term climate change response experiment in an ombrotrophic peat bog in Minnesota to evaluate the effects of warming and elevated CO 2 on ecosystem processes using empirical and modeling approaches. To better frame future assessments of peatland responses to climate change, we characterized and compared spatial vs. temporal variation in measured C cycle processes and their environmental drivers. We also conducted a sensitivity analysis of a peatland C model to identify how variation in ecosystem parameters contributes to model prediction uncertainty. High spatial variability in C cycle processes resulted in the inability to determinemore » if the bog was a C source or sink, as the 95% confidence interval ranged from a source of 50 g C m –2 yr –1 to a sink of 67 g C m –2 yr –1. Model sensitivity analysis also identified that spatial variation in tree and shrub photosynthesis, allocation characteristics, and maintenance respiration all contributed to large variations in the pretreatment estimates of net C balance. Variation in ecosystem processes can be more thoroughly characterized if more measurements are collected for parameters that are highly variable over space and time, and especially if those measurements encompass environmental gradients that may be driving the spatial and temporal variation (e.g., hummock vs. hollow microtopographies, and wet vs. dry years). Together, the coupled modeling and empirical approaches indicate that variability in C cycle processes and their drivers must be taken into account when interpreting the significance of experimental warming and elevated CO 2 treatments.« less

75 FR 38066 - Airworthiness Directives; The Boeing Company Model 727, 727C, 727-100, 727-100C, 727-200, and 727...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-01

... 0.75 inch to 11.8 inches in length at the buttock line 61, between water line (WL) 220 and WL 228..., and between 10,685 total flight cycles and 29,357 total flight cycles. The cracking is attributed to..., in addition to normal pressurization cycles. Material analysis revealed multiple crack initiation...

Is objective and accurate cognitive assessment across the menstrual cycle possible? A feasibility study

PubMed Central

Neill, Jo; Scally, Andy; Tuffnell, Derek; Marshall, Kay

2015-01-01

Objectives: Variation in plasma hormone levels influences the neurobiology of brain regions involved in cognition and emotion processing. Fluctuations in hormone levels across the menstrual cycle could therefore alter cognitive performance and wellbeing; reports have provided conflicting results, however. The aim of this study was to assess whether objective assessment of cognitive performance and self-reported wellbeing during the follicular and luteal phases of the menstrual cycle is feasible and investigate the possible reasons for variation in effects previously reported. Methods: The Cambridge Neuropsychological Test Automated Battery and Edinburgh Postnatal Depression Scale were used to assess the cognitive performance and wellbeing of 12 women. Data were analysed by self-reported and hormone-estimated phases of the menstrual cycle. Results: Recruitment to the study and assessment of cognition and wellbeing was without issue. Plasma hormone and peptide estimation showed substantial individual variation and suggests inaccuracy in self-reported menstrual phase estimation. Conclusion: Objective assessment of cognitive performance and self-assessed wellbeing across the menstrual cycle is feasible. Grouping data by hormonal profile rather by self-reported phase estimation may influence phase-mediated results. Future studies should use plasma hormone and peptide profiles to estimate cycle phase and group data for analyses. PMID:26770760

Length Variation of Cag/Caa Trinucleotide Repeats in Natural Populations of Drosophila Melanogaster and Its Relation to the Recombination Rate

PubMed Central

Michalakis, Y.; Veuille, M.

1996-01-01

Eleven genes distributed along the Drosophila melanogaster chromosome 2 and showing exonic tandem repeats of glutamine codons (CAG or CAA) were surveyed for length variation in a sample of four European and African populations. Only one gene was monomorphic. Eight genes were polymorphic in all populations, with a total number of alleles varying between five and 12 for 120 chromosomes. The average heterozygozity per locus and population was 0.41. Selective neutrality in length variation could not be rejected under the assumptions of the infinite allele model. Significant population subdivision was found though no geographical pattern emerged, all populations being equally different. Significant linkage disequilibrium was found in four out of seven cases where the genetic distance between loci was <1 cM and was negligible when the distance was larger. There is evidence that these associations were established after the populations separated. An unexpected result was that variation at each locus was independent of the coefficient of exchange, although the latter ranged from zero to the relatively high value of 6.7%. This would indicate that background selection and selective hitchhiking, which are thought to affect levels of nucleotide substitution polymorphism, have no effect on trinucleotide repeat variation. PMID:8844158

Natural polyploidy in Vanilla planifolia (Orchidaceae).

PubMed

Bory, Séverine; Catrice, Olivier; Brown, Spencer; Leitch, Ilia J; Gigant, Rodolphe; Chiroleu, Frédéric; Grisoni, Michel; Duval, Marie-France; Besse, Pascale

2008-10-01

Vanilla planifolia accessions cultivated in Reunion Island display important phenotypic variation, but little genetic diversity is demonstrated by AFLP and SSR markers. This study, based on analyses of flow cytometry data, Feulgen microdensitometry data, chromosome counts, and stomatal length measurements, was performed to determine whether polyploidy could be responsible for some of the intraspecific phenotypic variation observed. Vanilla planifolia exhibited an important variation in somatic chromosome number in root cells, as well as endoreplication as revealed by flow cytometry. Nevertheless, the 2C-values of the 50 accessions studied segregated into three distinct groups averaging 5.03 pg (for most accessions), 7.67 pg (for the 'Stérile' phenotypes), and 10.00 pg (for the 'Grosse Vanille' phenotypes). For the three groups, chromosome numbers varied from 16 to 32, 16 to 38, and 22 to 54 chromosomes per cell, respectively. The stomatal length showed a significant variation from 37.75 microm to 48.25 microm. Given that 2C-values, mean chromosome numbers, and stomatal lengths were positively correlated and that 'Stérile' and 'Grosse Vanille' accessions were indistinguishable from 'Classique' accessions using molecular markers, the occurrence of recent autotriploid and autotetraploid types in Reunion Island is supported. This is the first report showing evidence of a recent autopolyploidy in V. planifolia contributing to the phenotypic variation observed in this species.

The effect of cooling management on blood flow to the dominant follicle and estrous cycle length at heat stress.

PubMed

Honig, Hen; Ofer, Lior; Kaim, Moshe; Jacobi, Shamay; Shinder, Dima; Gershon, Eran

2016-07-15

The use of ultrasound imaging for the examination of reproductive organs has contributed substantially to the fertility management of dairy cows around the world. This method has many advantages such as noninvasiveness and immediate availability of information. Adding Doppler index to the ultrasound imaging examination, improved the estimation of blood volume and flow rate to the ovaries in general and to the dominant follicle in particular. The aim of this study was to examine changes in the blood flow to the dominant follicle and compare them to the follicular development throughout the cycle. We further set out to examine the effects of different types of cooling management during the summer on the changes in blood flow to the dominant follicle. For this purpose, 24 Israeli-Holstein dairy cows, under heat stress, were randomly assigned one of two groups: one was exposed to five cooling sessions per day (5CS) and the other to eight cooling sessions per day (8CS). Blood flow to the dominant follicle was measured daily using Doppler index throughout the estrous cycle. No differences in the preovulatory dominant follicle diameter were detected between the two cooling management regimens during the cycle. However, the length of the first follicular wave was significantly longer, whereas the second follicular wave was nonsignificantly shorter in the 5CS group as compared to the 8CS group. In addition, no difference in blood flow was found during the first 18 days of the cycle between the two groups. However, from Day 20 until ovulation a higher rate of blood flow was measured in the ovaries of cows cooled 8 times per day as compared to the 5CS group. No differences in progesterone levels were noted. Finally, the estrous cycle length was shorter in the 8CS group as compared to the 5CS group. Our data suggest that blood flow to the dominant follicle and estrous cycle length is affected by heat stress. Using the appropriate cooling management during heat stress can enhance the blood flow to the ovary and may contribute to improved fertility in dairy cows. Copyright © 2016 Elsevier Inc. All rights reserved.

Solar cycle variation of Mars exospheric temperatures: Critical review of available dayside measurements and recent model simulations

NASA Astrophysics Data System (ADS)

Bougher, Stephen; Huestis, David

The responses of the Martian dayside thermosphere to solar flux variations (on both solar rotation and solar cycle timescales) have been the subject of considerable debate and study for many years. Available datasets include: Mariner 6,7,9 (UVS dayglow), Viking Lander 1-2 (UAMS densities upon descent), several aerobraking campaigns (MGS, Odyssey, MRO densities), and Mars Express (SPICAM dayglow). Radio Science derived plasma scale heights near the ionospheric peak can be used to derive neutral temperatures in this region (only); such values are not applicable to exobase heights (e.g. Forbes et al. 2008; Bougher et al. 2009). Recently, densities and temperatures derived from precise orbit determination of the MGS spacecraft (1999-2005) have been used to establish the responses of Mars' exosphere to long-term solar flux variations (Forbes et al., 2008). From this multi-year dataset, dayside exospheric temperatures weighted toward moderate southern latitudes are found to change by about 120 K over the solar cycle. However, the applicability of these drag derived exospheric temperatures to near solar minimum conditions is suspect (e.g Bruinsma and Lemoine, 2002). Finally, re-evaluation of production mechanisms for UV dayglow emissions implies revised values for exospheric temperatures (e.g. Simon et al., 2009; Huestis et al. 2010). Several processes are known to influence Mars' exospheric temperatures and their variability (Bougher et al., 1999; 2000; 2009). Solar EUV heating and its variations with solar fluxes received at Mars, CO2 15-micron cooling, molecular thermal conduction, and hydrodynamic heating/cooling associated with global dynamics all contribute to regulate dayside thermo-spheric temperatures. Poorly measured dayside atomic oxygen abundances render CO2 cooling rates uncertain at the present time. However, global thermospheric circulation models can be exercised for conditions spanning the solar cycle and Mars seasons to address the relative roles of these processes in driving observed variations in dayside exospheric temperatures. Mars Thermospheric General Circulation Model (MTGCM) simulations and resulting exo-spheric temperatures will be presented and compared with assimilated temperatures collected from all these available measurements over the solar cycle. It is important to match measure-ments at dayside local times and latitudes for specific seasons with corresponding MTGCM simulated outputs. Calculated local heat budgets and their variations illustrate the changes required to reproduce solar cycle variations in exospheric temperatures. The ability to success-fully predict solar cycle responses of the Martian upper atmosphere is important for simulations of present-day Mars volatile escape rates.