Location of irrigated land classified from satellite imagery - High Plains Area, nominal date 1992

USGS Publications Warehouse

Qi, Sharon L.; Konduris, Alexandria; Litke, David W.; Dupree, Jean

2002-01-01

Satellite imagery from the Landsat Thematic Mapper (nominal date 1992) was used to classify and map the location of irrigated land overlying the High Plains aquifer. The High Plains aquifer underlies 174,000 square miles in parts of Colorado, Kansas, Nebraska, New Mexico, Oklahoma, South Dakota, Texas, and Wyoming. The U.S. Geological Survey is conducting a water-quality study of the High Plains aquifer as part of the National Water-Quality Assessment Program. To help interpret data and select sites for the study, it is helpful to know the location of irrigated land within the study area. To date, the only information available for the entire area is 20 years old. To update the data on irrigated land, 40 summer and 40 spring images (nominal date 1992) were acquired from the National Land Cover Data set and processed using a band-ratio method (Landsat Thematic Mapper band 4 divided by band 3) to enhance the vegetation signatures. The study area was divided into nine subregions with similar environmental characteristics, and a band-ratio threshold was selected from imagery in each subregion that differentiated the cutoff between irrigated and nonirrigated land. The classified images for each subregion were mosaicked to produce an irrigated-land map for the study area. The total amount of irrigated land classified from the 1992 imagery was 13.1 million acres, or about 12 percent of the total land in the High Plains. This estimate is approximately 1.5 percent greater than the amount of irrigated land reported in the 1992 Census of Agriculture (12.8 millions acres).

Assessment of Classification Accuracies of SENTINEL-2 and LANDSAT-8 Data for Land Cover / Use Mapping

NASA Astrophysics Data System (ADS)

Hale Topaloğlu, Raziye; Sertel, Elif; Musaoğlu, Nebiye

2016-06-01

This study aims to compare classification accuracies of land cover/use maps created from Sentinel-2 and Landsat-8 data. Istanbul metropolitan city of Turkey, with a population of around 14 million, having different landscape characteristics was selected as study area. Water, forest, agricultural areas, grasslands, transport network, urban, airport- industrial units and barren land- mine land cover/use classes adapted from CORINE nomenclature were used as main land cover/use classes to identify. To fulfil the aims of this research, recently acquired dated 08/02/2016 Sentinel-2 and dated 22/02/2016 Landsat-8 images of Istanbul were obtained and image pre-processing steps like atmospheric and geometric correction were employed. Both Sentinel-2 and Landsat-8 images were resampled to 30m pixel size after geometric correction and similar spectral bands for both satellites were selected to create a similar base for these multi-sensor data. Maximum Likelihood (MLC) and Support Vector Machine (SVM) supervised classification methods were applied to both data sets to accurately identify eight different land cover/ use classes. Error matrix was created using same reference points for Sentinel-2 and Landsat-8 classifications. After the classification accuracy, results were compared to find out the best approach to create current land cover/use map of the region. The results of MLC and SVM classification methods were compared for both images.

Characterizing semantic mappings adaptation via biomedical KOS evolution: a case study investigating SNOMED CT and ICD.

PubMed

Dos Reis, Julio Cesar; Pruski, Cédric; Da Silveira, Marcos; Reynaud-Delaître, Chantal

2013-01-01

Mappings established between Knowledge Organization Systems (KOS) increase semantic interoperability between biomedical information systems. However, biomedical knowledge is highly dynamic and changes affecting KOS entities can potentially invalidate part or the totality of existing mappings. Understanding how mappings evolve and what the impacts of KOS evolution on mappings are is therefore crucial for the definition of an automatic approach to maintain mappings valid and up-to-date over time. In this article, we study variations of a specific KOS complex change (split) for two biomedical KOS (SNOMED CT and ICD-9-CM) through a rigorous method of investigation for identifying and refining complex changes, and for selecting representative cases. We empirically analyze and explain their influence on the evolution of associated mappings. Results point out the importance of considering various dimensions of the information described in KOS, like the semantic structure of concepts, the set of relevant information used to define the mappings and the change operations interfering with this set of information.

Characterizing Semantic Mappings Adaptation via Biomedical KOS Evolution: A Case Study Investigating SNOMED CT and ICD

PubMed Central

Reis, Julio Cesar Dos; Pruski, Cédric; Da Silveira, Marcos; Reynaud-Delaître, Chantal

2013-01-01

Mappings established between Knowledge Organization Systems (KOS) increase semantic interoperability between biomedical information systems. However, biomedical knowledge is highly dynamic and changes affecting KOS entities can potentially invalidate part or the totality of existing mappings. Understanding how mappings evolve and what the impacts of KOS evolution on mappings are is therefore crucial for the definition of an automatic approach to maintain mappings valid and up-to-date over time. In this article, we study variations of a specific KOS complex change (split) for two biomedical KOS (SNOMED CT and ICD-9-CM) through a rigorous method of investigation for identifying and refining complex changes, and for selecting representative cases. We empirically analyze and explain their influence on the evolution of associated mappings. Results point out the importance of considering various dimensions of the information described in KOS, like the semantic structure of concepts, the set of relevant information used to define the mappings and the change operations interfering with this set of information. PMID:24551341

Informative markers identification and multivariate analysis of selected DxP for the purpose of QTL mapping

NASA Astrophysics Data System (ADS)

Hazirah S., Z.; Maizura, I.; Rajinder, S.; Mohd Isa Z., A.; Ismanizan, I.

2014-09-01

A study was carried out to generate a linkage map of oil palm dura x pisifera (DXP) population. A subset of sample from a DXP mapping family was screened using 325 SSR primers, of which 221 were informative. To date, 150 SSRs have been genotyped across the entire DxP population via capillary sequencer, where 73 SSRs had 1:1 segregation ratio, 64 had 1:1:1:1, 3 had 3:1 and ten had 1:2:1 segregation ratios. Kolmogorov-Smirnov tests by SPSS revealed that most of the bunch quality components had normal distribution which fulfilled one of the pre-requisites to carry out phenotype-genotype correlation association.

A first genetic map of date palm (Phoenix dactylifera) reveals long-range genome structure conservation in the palms.

PubMed

Mathew, Lisa S; Spannagl, Manuel; Al-Malki, Ameena; George, Binu; Torres, Maria F; Al-Dous, Eman K; Al-Azwani, Eman K; Hussein, Emad; Mathew, Sweety; Mayer, Klaus F X; Mohamoud, Yasmin Ali; Suhre, Karsten; Malek, Joel A

2014-04-15

The date palm is one of the oldest cultivated fruit trees. It is critical in many ways to cultures in arid lands by providing highly nutritious fruit while surviving extreme heat and environmental conditions. Despite its importance from antiquity, few genetic resources are available for improving the productivity and development of the dioecious date palm. To date there has been no genetic map and no sex chromosome has been identified. Here we present the first genetic map for date palm and identify the putative date palm sex chromosome. We placed ~4000 markers on the map using nearly 1200 framework markers spanning a total of 1293 cM. We have integrated the genetic map, derived from the Khalas cultivar, with the draft genome and placed up to 19% of the draft genome sequence scaffolds onto linkage groups for the first time. This analysis revealed approximately ~1.9 cM/Mb on the map. Comparison of the date palm linkage groups revealed significant long-range synteny to oil palm. Analysis of the date palm sex-determination region suggests it is telomeric on linkage group 12 and recombination is not suppressed in the full chromosome. Based on a modified genotyping-by-sequencing approach we have overcome challenges due to lack of genetic resources and provide the first genetic map for date palm. Combined with the recent draft genome sequence of the same cultivar, this resource offers a critical new tool for date palm biotechnology, palm comparative genomics and a better understanding of sex chromosome development in the palms.

Specifications for updating USGS land use and land cover maps

USGS Publications Warehouse

Milazzo, Valerie A.

1983-01-01

To meet the increasing demands for up-to-date land use and land cover information, a primary goal of the U.S. Geological Survey's (USGS) national land use and land cover mapping program is to provide for periodic updating of maps and data in a timely and uniform manner. The technical specifications for updating existing USGS land use and land cover maps that are presented here cover both the interpretive aspects of detecting and identifying land use and land cover changes and the cartographic aspects of mapping and presenting the change data in conventional map format. They provide the map compiler with the procedures and techniques necessary to then use these change data to update existing land use and land cover maps in a manner that is both standardized and repeatable. Included are specifications for the acquisition of remotely sensed source materials, selection of compilation map bases, handling of data base corrections, editing and quality control operations, generation of map update products for USGS open file, and the reproduction and distribution of open file materials. These specifications are planned to become part of the National Mapping Division's Technical Instructions.

The Cellular Automata for modelling of spreading of lava flow on the earth surface

NASA Astrophysics Data System (ADS)

Jarna, A.

2012-12-01

Volcanic risk assessment is a very important scientific, political and economic issue in densely populated areas close to active volcanoes. Development of effective tools for early prediction of a potential volcanic hazard and management of crises are paramount. However, to this date volcanic hazard maps represent the most appropriate way to illustrate the geographical area that can potentially be affected by a volcanic event. Volcanic hazard maps are usually produced by mapping out old volcanic deposits, however dynamic lava flow simulation gaining popularity and can give crucial information to corroborate other methodologies. The methodology which is used here for the generation of volcanic hazard maps is based on numerical simulation of eruptive processes by the principle of Cellular Automata (CA). The python script is integrated into ArcToolbox in ArcMap (ESRI) and the user can select several input and output parameters which influence surface morphology, size and shape of the flow, flow thickness, flow velocity and length of lava flows. Once the input parameters are selected, the software computes and generates hazard maps on the fly. The results can be exported to Google Maps (.klm format) to visualize the results of the computation. For validation of the simulation code are used data from a real lava flow. Comparison of the simulation results with real lava flows mapped out from satellite images will be presented.

A first genetic map of date palm (Phoenix dactylifera) reveals long-range genome structure conservation in the palms

PubMed Central

2014-01-01

Background The date palm is one of the oldest cultivated fruit trees. It is critical in many ways to cultures in arid lands by providing highly nutritious fruit while surviving extreme heat and environmental conditions. Despite its importance from antiquity, few genetic resources are available for improving the productivity and development of the dioecious date palm. To date there has been no genetic map and no sex chromosome has been identified. Results Here we present the first genetic map for date palm and identify the putative date palm sex chromosome. We placed ~4000 markers on the map using nearly 1200 framework markers spanning a total of 1293 cM. We have integrated the genetic map, derived from the Khalas cultivar, with the draft genome and placed up to 19% of the draft genome sequence scaffolds onto linkage groups for the first time. This analysis revealed approximately ~1.9 cM/Mb on the map. Comparison of the date palm linkage groups revealed significant long-range synteny to oil palm. Analysis of the date palm sex-determination region suggests it is telomeric on linkage group 12 and recombination is not suppressed in the full chromosome. Conclusions Based on a modified gentoyping-by-sequencing approach we have overcome challenges due to lack of genetic resources and provide the first genetic map for date palm. Combined with the recent draft genome sequence of the same cultivar, this resource offers a critical new tool for date palm biotechnology, palm comparative genomics and a better understanding of sex chromosome development in the palms. PMID:24735434

A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda

PubMed Central

Westbrook, Jared W.; Chhatre, Vikram E.; Wu, Le-Shin; Chamala, Srikar; Neves, Leandro Gomide; Muñoz, Patricio; Martínez-García, Pedro J.; Neale, David B.; Kirst, Matias; Mockaitis, Keithanne; Nelson, C. Dana; Peter, Gary F.; Echt, Craig S.

2015-01-01

A consensus genetic map for Pinus taeda (loblolly pine) and Pinus elliottii (slash pine) was constructed by merging three previously published P. taeda maps with a map from a pseudo-backcross between P. elliottii and P. taeda. The consensus map positioned 3856 markers via genotyping of 1251 individuals from four pedigrees. It is the densest linkage map for a conifer to date. Average marker spacing was 0.6 cM and total map length was 2305 cM. Functional predictions of mapped genes were improved by aligning expressed sequence tags used for marker discovery to full-length P. taeda transcripts. Alignments to the P. taeda genome mapped 3305 scaffold sequences onto 12 linkage groups. The consensus genetic map was used to compare the genome-wide linkage disequilibrium in a population of distantly related P. taeda individuals (ADEPT2) used for association genetic studies and a multiple-family pedigree used for genomic selection (CCLONES). The prevalence and extent of LD was greater in CCLONES as compared to ADEPT2; however, extended LD with LGs or between LGs was rare in both populations. The average squared correlations, r2, between SNP alleles less than 1 cM apart were less than 0.05 in both populations and r2 did not decay substantially with genetic distance. The consensus map and analysis of linkage disequilibrium establish a foundation for comparative association mapping and genomic selection in P. taeda and P. elliottii. PMID:26068575

Dynamics of distribution and density of phreatophytes and other arid land plant communities

NASA Technical Reports Server (NTRS)

Turner, R. M. (Principal Investigator)

1973-01-01

The author has identified the following significant results. Ground truth measurements of plant coverage on six satellite overflight dates reveal unique trends in coverage for the five desert or semi-desert communities selected. Densitometry and multispectral additive color viewing were used in a preliminary analysis of imagery using the electronic satellite image analyzer console at Stanford Research Institute. The densitometric analysis shows promise for mapping boundaries between plant communities. Color additive viewing of a chronologic sequence of the same scene shown in rapid order will provide a method for mapping phreatophyte communities.

Large-Scale SNP Discovery and Genotyping for Constructing a High-Density Genetic Map of Tea Plant Using Specific-Locus Amplified Fragment Sequencing (SLAF-seq)

PubMed Central

Ma, Chun-Lei; Jin, Ji-Qiang; Li, Chun-Fang; Wang, Rong-Kai; Zheng, Hong-Kun; Yao, Ming-Zhe; Chen, Liang

2015-01-01

Genetic maps are important tools in plant genomics and breeding. The present study reports the large-scale discovery of single nucleotide polymorphisms (SNPs) for genetic map construction in tea plant. We developed a total of 6,042 valid SNP markers using specific-locus amplified fragment sequencing (SLAF-seq), and subsequently mapped them into the previous framework map. The final map contained 6,448 molecular markers, distributing on fifteen linkage groups corresponding to the number of tea plant chromosomes. The total map length was 3,965 cM, with an average inter-locus distance of 1.0 cM. This map is the first SNP-based reference map of tea plant, as well as the most saturated one developed to date. The SNP markers and map resources generated in this study provide a wealth of genetic information that can serve as a foundation for downstream genetic analyses, such as the fine mapping of quantitative trait loci (QTL), map-based cloning, marker-assisted selection, and anchoring of scaffolds to facilitate the process of whole genome sequencing projects for tea plant. PMID:26035838

2. COPY OF MAP DATED 121073, OF THE CLEVELAND DISTRICT ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

2. COPY OF MAP DATED 12-10-73, OF THE CLEVELAND DISTRICT STEEL PLANT, REPUBLIC STEEL CORPORATION. MAP COURTESY REPUBLIC STEEL. - Corrigan, McKinney Steel Company, 3100 East Forty-fifth Street, Cleveland, Cuyahoga County, OH

Cytogenetic analysis and mapping of leaf rust resistance in Aegilops speltoides Tausch derived bread wheat line Selection2427 carrying putative gametocidal gene(s).

PubMed

Niranjana, M; Vinod; Sharma, J B; Mallick, Niharika; Tomar, S M S; Jha, S K

2017-12-01

Leaf rust (Puccinia triticina) is a major biotic stress affecting wheat yields worldwide. Host-plant resistance is the best method for controlling leaf rust. Aegilops speltoides is a good source of resistance against wheat rusts. To date, five Lr genes, Lr28, Lr35, Lr36, Lr47, and Lr51, have been transferred from Ae. speltoides to bread wheat. In Selection2427, a bread wheat introgresed line with Ae. speltoides as the donor parent, a dominant gene for leaf rust resistance was mapped to the long arm of chromosome 3B (LrS2427). None of the Lr genes introgressed from Ae. speltoides have been mapped to chromosome 3B. Since none of the designated seedling leaf rust resistance genes have been located on chromosome 3B, LrS2427 seems to be a novel gene. Selection2427 showed a unique property typical of gametocidal genes, that when crossed to other bread wheat cultivars, the F 1 showed partial pollen sterility and poor seed setting, whilst Selection2427 showed reasonable male and female fertility. Accidental co-transfer of gametocidal genes with LrS2427 may have occurred in Selection2427. Though LrS2427 did not show any segregation distortion and assorted independently of putative gametocidal gene(s), its utilization will be difficult due to the selfish behavior of gametocidal genes.

Age mapping and dating of monazite on the electron microprobe: Deconvoluting multistage tectonic histories

NASA Astrophysics Data System (ADS)

Williams, Michael L.; Jercinovic, Michael J.; Terry, Michael P.

1999-11-01

High-resolution X-ray mapping and dating of monazite on the electron microprobe are powerful geochronological tools for structural, metamorphic, and tectonic analysis. X-ray maps commonly show complex Th, U, and Pb zoning that reflects monazite growth and overgrowth events. Age maps constructed from the X-ray maps simplify the zoning and highlight age domains. Microprobe dating offers a rapid, in situ method for estimating ages of mapped domains. Application of these techniques has placed new constraints on the tectonic history of three areas. In western Canada, age mapping has revealed multiphase monazite, with older cores and younger rims, included in syntectonic garnet. Microprobe ages show that tectonism occurred ca. 1.9 Ga, 700 m.y. later than mylonitization in the adjacent Snowbird tectonic zone. In New Mexico, age mapping and dating show that the dominant fabric and triple-point metamorphism occurred during a 1.4 Ga reactivation, not during the 1.7 Ga Yavapai-Mazatzal orogeny. In Norway, monazite inclusions in garnet constrain high-pressure metamorphism to ca. 405 Ma, and older cores indicate a previously unrecognized component of ca. 1.0 Ga monazite. In all three areas, microprobe dating and age mapping have provided a critical textural context for geochronologic data and a better understanding of the complex age spectra of these multistage orogenic belts.

Design Description for Team-Based Execution of Autonomous Missions (TEAM), Spiral 1

DTIC Science & Technology

2008-11-18

TEAM), Spiral 1 Doc. #: Version: 1.0 Date: November 18, 2008 Page 12 of 39 Visualization Framework (WorldWind) Hibernate / Hibernate ...Spatial hibernate -properties XML Mapping WCS WFSWMS Enterprise Service Bus (Mule) Messaging, Data Transformation, Intelligent Routing Workflow Engine...government selected solutions. Neither these nor Mule® are deliverable, but the government may opt to use them if it so chooses. jBPM, java Business

Land cover trends dataset, 1973-2000

USGS Publications Warehouse

Soulard, Christopher E.; Acevedo, William; Auch, Roger F.; Sohl, Terry L.; Drummond, Mark A.; Sleeter, Benjamin M.; Sorenson, Daniel G.; Kambly, Steven; Wilson, Tamara S.; Taylor, Janis L.; Sayler, Kristi L.; Stier, Michael P.; Barnes, Christopher A.; Methven, Steven C.; Loveland, Thomas R.; Headley, Rachel; Brooks, Mark S.

2014-01-01

The U.S. Geological Survey Land Cover Trends Project is releasing a 1973–2000 time-series land-use/land-cover dataset for the conterminous United States. The dataset contains 5 dates of land-use/land-cover data for 2,688 sample blocks randomly selected within 84 ecological regions. The nominal dates of the land-use/land-cover maps are 1973, 1980, 1986, 1992, and 2000. The land-use/land-cover maps were classified manually from Landsat Multispectral Scanner, Thematic Mapper, and Enhanced Thematic Mapper Plus imagery using a modified Anderson Level I classification scheme. The resulting land-use/land-cover data has a 60-meter resolution and the projection is set to Albers Equal-Area Conic, North American Datum of 1983. The files are labeled using a standard file naming convention that contains the number of the ecoregion, sample block, and Landsat year. The downloadable files are organized by ecoregion, and are available in the ERDAS IMAGINETM (.img) raster file format.

A high-density transcript linkage map with 1,845 expressed genes positioned by microarray-based Single Feature Polymorphisms (SFP) in Eucalyptus

PubMed Central

2011-01-01

Background Technological advances are progressively increasing the application of genomics to a wider array of economically and ecologically important species. High-density maps enriched for transcribed genes facilitate the discovery of connections between genes and phenotypes. We report the construction of a high-density linkage map of expressed genes for the heterozygous genome of Eucalyptus using Single Feature Polymorphism (SFP) markers. Results SFP discovery and mapping was achieved using pseudo-testcross screening and selective mapping to simultaneously optimize linkage mapping and microarray costs. SFP genotyping was carried out by hybridizing complementary RNA prepared from 4.5 year-old trees xylem to an SFP array containing 103,000 25-mer oligonucleotide probes representing 20,726 unigenes derived from a modest size expressed sequence tags collection. An SFP-mapping microarray with 43,777 selected candidate SFP probes representing 15,698 genes was subsequently designed and used to genotype SFPs in a larger subset of the segregating population drawn by selective mapping. A total of 1,845 genes were mapped, with 884 of them ordered with high likelihood support on a framework map anchored to 180 microsatellites with average density of 1.2 cM. Using more probes per unigene increased by two-fold the likelihood of detecting segregating SFPs eventually resulting in more genes mapped. In silico validation showed that 87% of the SFPs map to the expected location on the 4.5X draft sequence of the Eucalyptus grandis genome. Conclusions The Eucalyptus 1,845 gene map is the most highly enriched map for transcriptional information for any forest tree species to date. It represents a major improvement on the number of genes previously positioned on Eucalyptus maps and provides an initial glimpse at the gene space for this global tree genome. A general protocol is proposed to build high-density transcript linkage maps in less characterized plant species by SFP genotyping with a concurrent objective of reducing microarray costs. HIgh-density gene-rich maps represent a powerful resource to assist gene discovery endeavors when used in combination with QTL and association mapping and should be especially valuable to assist the assembly of reference genome sequences soon to come for several plant and animal species. PMID:21492453

How Long Was the Coast of Ireland? Investigating the Variation of the Fractal Dimension of Maps over Time

ERIC Educational Resources Information Center

McCartney, M.; Myers, D.; Sun, Y.

2008-01-01

The divider dimensions of a range of maps of Ireland dating from 1567 to 1893 are evaluated, and it is shown that for maps produced before 1650 the fractal dimension of the map can be correlated to its date of publication. Various classroom uses and extensions are discussed. (Contains 2 figures.)

A Mapping from the Human Factors Analysis and Classification System (DOD-HFACS) to the Domains of Human Systems Integration (HSI)

DTIC Science & Technology

2009-11-01

Equation Chapter 1 Section 1 A MAPPING FROM THE HUMAN FACTORS ANALYSIS AND CLASSIFICATION SYSTEM (DOD...OMB control number. 1. REPORT DATE NOV 2009 2. REPORT TYPE 3. DATES COVERED 4. TITLE AND SUBTITLE A Mapping from the Human Factors Analysis ...7 The Human Factors Analysis and Classification System .................................................. 7 Mapping of DoD

Identification and characterization of gene-based SSR markers in date palm (Phoenix dactylifera L.).

PubMed

Zhao, Yongli; Williams, Roxanne; Prakash, C S; He, Guohao

2012-12-15

Date palm (Phoenix dactylifera L.) is an important tree in the Middle East and North Africa due to the nutritional value of its fruit. Molecular Breeding would accelerate genetic improvement of fruit tree through marker assisted selection. However, the lack of molecular markers in date palm restricts the application of molecular breeding. In this study, we analyzed 28,889 EST sequences from the date palm genome database to identify simple-sequence repeats (SSRs) and to develop gene-based markers, i.e. expressed sequence tag-SSRs (EST-SSRs). We identified 4,609 ESTs as containing SSRs, among which, trinucleotide motifs (69.7%) were the most common, followed by tetranucleotide (10.4%) and dinucleotide motifs (9.6%). The motif AG (85.7%) was most abundant in dinucleotides, while motifs AGG (26.8%), AAG (19.3%), and AGC (16.1%) were most common among trinucleotides. A total of 4,967 primer pairs were designed for EST-SSR markers from the computational data. In a follow up laboratory study, we tested a sample of 20 random selected primer pairs for amplification and polymorphism detection using genomic DNA from date palm cultivars. Nearly one-third of these primer pairs detected DNA polymorphism to differentiate the twelve date palm cultivars used. Functional categorization of EST sequences containing SSRs revealed that 3,108 (67.4%) of such ESTs had homology with known proteins. Date palm EST sequences exhibits a good resource for developing gene-based markers. These genic markers identified in our study may provide a valuable genetic and genomic tool for further genetic research and varietal development in date palm, such as diversity study, QTL mapping, and molecular breeding.

Arizona in . . . 16mm Films, 8mm Films, Filmloops, Filmstrips, Slides, Transparencies, Cassettes, Records, Photos, Prints, Posters, Charts, Study Prints, Maps, Flags, Book Returns, Bookmarks, Foods, Microfilm, Place Mats, Relief Model Kits, Stereo Picture Reels.

ERIC Educational Resources Information Center

Choncoff, Mary, Comp.

The product of a year's search through numerous selection aids, catalogs, conference exhibits, book stores, shops at Arizona historical sites, etc., this compilation presents both instructional and promotional non-print materials relative to Arizona. Procedures for procuring materials, annotations, and bibliographic information (source, date of…

27 CFR 9.58 - Carmel Valley.

Code of Federal Regulations, 2011 CFR

2011-04-01

....” (b) Approved maps. The approved maps for determining the boundary of the Carmel Valley viticultural... Ridge, Calif., dated 1956; and (5) Rana Creek, Calif., dated 1956. (c) Boundary. The Carmel Valley...

27 CFR 9.58 - Carmel Valley.

Code of Federal Regulations, 2010 CFR

2010-04-01

....” (b) Approved maps. The approved maps for determining the boundary of the Carmel Valley viticultural... Ridge, Calif., dated 1956; and (5) Rana Creek, Calif., dated 1956. (c) Boundary. The Carmel Valley...

Dating the Vinland Map

ScienceCinema

Harbottle, Garman

2018-05-11

Scientists from Brookhaven National Laboratory, the University of Arizona, and the Smithsonian Institution used carbon-dating technology to determine the age of a controversial parchment that might be the first-ever map of North America.

Social Network Mapping: A New Tool For The Leadership Toolbox

DTIC Science & Technology

2002-04-01

SOCIAL NETWORK MAPPING: A NEW TOOL FOR THE LEADERSHIP TOOLBOX By Elisabeth J. Strines, Colonel, USAF 8037 Washington Road Alexandria...valid OMB control number. 1. REPORT DATE 00 APR 2002 2. REPORT TYPE N/A 3. DATES COVERED - 4. TITLE AND SUBTITLE Social Network Mapping: A...describes the concept of social network mapping and demonstrates how it can be used by squadron commanders and leaders at all levels to provide subtle

Precipitation and lake-level changes in the West and Midwest over the past 10,000 to 24,000 years. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Webb, T. III; Street, F.A.; Howe, S.

The goal of the research described in this report is to document the climatic variability over the past 10,000 to 20,000 years in areas in which sites may be designated for the burial of nuclear wastes. Three separate data sets were studied, and the results are presented in three chapters. The first data set consisted of radiocarbon dates documenting past changes in lake levels in lakes and playas in the western United States. The sites were mapped where water levels were higher than the levels today and were presented in a table telling what evidence is available at each site.more » The lake-level fluctuations for the past 24,000 years at sites in the West were also mapped and time series for these fluctuations at four sites were presented. The second data set was a selection of the published radiocarbon-dated pollen diagrams from the western United States. These data are a valuable source of climatic information and complement the geological evidence of lake-level fluctuations in the West. A table is presented that gives the location, elevation, and number of radiocarbon dates for each site. The third data set was a set of fossil pollen data from 20 sites in the upper Midwest. These data were calibrated in terms of precipitation changes over the past 10,000 years, and maps are presented of the estimated precipitation changes between 10,000 and 7000 years ago and between 7000 years ago and today.« less

Field determination of optimal dates for the discrimination of invasive wetland plant species using derivative spectral analysis

USGS Publications Warehouse

Laba, M.; Tsai, F.; Ogurcak, D.; Smith, S.; Richmond, M.E.

2005-01-01

Mapping invasive plant species in aquatic and terrestrial ecosystems helps to understand the causes of their progression, manage some of their negative consequences, and control them. In recent years, a variety of new remote-sensing techniques, like Derivative Spectral Analysis (DSA) of hyperspectral data, have been developed to facilitate this mapping. A number of questions related to these techniques remain to be addressed. This article attempts to answer one of these questions: Is the application of DSA optimal at certain times of the year? Field radiometric data gathered weekly during the summer of 1999 at selected field sites in upstate New York, populated with purple loosestrife (Lythrum salicaria L.), common reed (Phragmites australis (Cav.)) and cattail (Typha L.) are analyzed using DSA to differentiate among plant community types. First, second and higher-order derivatives of the reflectance spectra of nine field plots, varying in plant composition, are calculated and analyzed in detail to identify spectral ranges in which one or more community types have distinguishing features. On the basis of the occurrence and extent of these spectral ranges, experimental observations suggest that a satisfactory differentiation among community types was feasible on 30 August, when plants experienced characteristic phenological changes (transition from flowers to seed heads). Generally, dates in August appear optimal from the point of view of species differentiability and could be selected for image acquisitions. This observation, as well as the methodology adopted in this article, should provide a firm basis for the acquisition of hyperspectral imagery and for mapping the targeted species over a broad range of spatial scales. ?? 2005 American Society for Photogrammetry and Remote Sensing.

Data services providing by the Ukrainian NODC (MHI NASU)

NASA Astrophysics Data System (ADS)

Eremeev, V.; Godin, E.; Khaliulin, A.; Ingerov, A.; Zhuk, E.

2009-04-01

At modern stage of the World Ocean study information support of investigation based on ad-vanced computer technologies becomes of particular importance. These abstracts are devoted to presentation of several data services developed in the Ukrainian NODC on the base of the Ma-rine Environmental and Information Technologies Department of MHI NASU. The Data Quality Control Service Using experience of international collaboration in the field of data collection and quality check we have developed the quality control (QC) software providing both preliminary(automatic) and expert(manual) data quality check procedures. The current version of the QC software works for the Mediterranean and Black seas and includes the climatic arrays for hydrological and few hydrochemical parameters based on such products as MEDAR/MEDATLAS II, Physical Oceanography of the Black Sea and Climatic Atlas of Oxygen and Hydrogen Sulfide in the Black sea. The data quality check procedure includes metadata control and hydrological and hydrochemical data control. Metadata control provides checking of duplicate cruises and pro-files, date and chronology, ship velocity, station location, sea depth and observation depth. Data QC procedure includes climatic (or range for parameters with small number of observations) data QC, density inversion check for hydrological data and searching for spikes. Using of cli-matic fields and profiles prepared by regional oceanography experts leads to more reliable results of data quality check procedure. The Data Access Services The Ukrainian NODC provides two products for data access - on-line software and data access module for the MHI NASU local net. This software allows select-ing data on rectangle area, on date, on months, on cruises. The result of query is metadata which are presented in the table and the visual presentation of stations on the map. It is possible to see both metadata and data. For this purpose it is necessary to select station in the table of metadata or on the map. There is also an opportunity to export data in ODV format. The product is avail-able on http://www.ocean.nodc.org.ua/DataAccess.php The local net version provides access to the oceanological database of the MHI NASU. The cur-rent version allows selecting data by spatial and temporal limits, depth, values of parameters, quality flags and works for the Mediterranean and Black seas. It provides visualization of meta-data and data, statistics of data selection, data export into several data formats. The Operational Data Management Services The collaborators of the MHI Experimental Branch developed a system of obtaining information on water pressure and temperature, as well as on atmospheric pressure. Sea level observations are also conducted. The obtained data are transferred online. The interface for operation data access was developed. It allows to select parameters (sea level, water temperature, atmospheric pressure, wind and wa-ter pressure) and time interval to see parameter graphics. The product is available on http://www.ocean.nodc.org.ua/Katsively.php . The Climatic products The current version of the Climatic Atlas includes maps on such pa-rameters as temperature, salinity, density, heat storage, dynamic heights, upper boundary of hy-drogen sulfide and lower boundary of oxygen for the Black sea basin. Maps for temperature, sa-linity, density were calculated on 19 standard depths and averaged monthly for depths 0 - 300 m and annually for lower depth values. The climatic maps of upper boundary of hydrogen sulfide and lower boundary of oxygen were averaged by decades from 20 till 90 of the XX century and by seasons. Two versions of climatic atlas viewer - on-line and desktop for presentation of the climatic maps were developed. They provide similar functions of selection and viewing maps by parameter, month and depth and saving maps in various formats. On-line version of atlas is available on http://www.ocean.nodc.org.ua/Main_Atlas.php .

Soil temperature investigations using satellite acquired thermal-infrared data in semi-arid regions. Thesis. Final Report; [Utah

NASA Technical Reports Server (NTRS)

Day, R. L.; Petersen, G. W.

1983-01-01

Thermal-infrared data from the Heat Capacity Mapping Mission satellite were used to map the spatial distribution of diurnal surface temperatures and to estimate mean annual soil temperatures (MAST) and annual surface temperature amplitudes (AMP) in semi-arid east central Utah. Diurnal data with minimal snow and cloud cover were selected for five dates throughout a yearly period and geometrically co-registered. Rubber-sheet stretching was aided by the WARP program which allowed preview of image transformations. Daytime maximum and nighttime minimum temperatures were averaged to generation average daily temperature (ADT) data set for each of the five dates. Five ADT values for each pixel were used to fit a sine curve describing the theoretical annual surface temperature response as defined by a solution of a one-dimensinal heat flow equation. Linearization of the equation produced estimates of MAST and AMP plus associated confidence statistics. MAST values were grouped into classes and displayed on a color video screen. Diurnal surface temperatures and MAST were primarily correlated with elevation.

63. Photocopy of photograph, no date. MAP OF POTOMAC EDISON ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

63. Photocopy of photograph, no date. MAP OF POTOMAC EDISON COMPANY SYSTEM. (Courtesy of the Potomac Edison Company Library (Hagerstown, MD), Historical Data Files - Dam No. 5 Hydroelectric Plant, On Potomac River, Hedgesville, Berkeley County, WV

A public platform for the verification of the phenotypic effect of candidate genes for resistance to aflatoxin accumulation and Aspergillus flavus infection in maize.

PubMed

Warburton, Marilyn L; Williams, William Paul; Hawkins, Leigh; Bridges, Susan; Gresham, Cathy; Harper, Jonathan; Ozkan, Seval; Mylroie, J Erik; Shan, Xueyan

2011-07-01

A public candidate gene testing pipeline for resistance to aflatoxin accumulation or Aspergillus flavus infection in maize is presented here. The pipeline consists of steps for identifying, testing, and verifying the association of selected maize gene sequences with resistance under field conditions. Resources include a database of genetic and protein sequences associated with the reduction in aflatoxin contamination from previous studies; eight diverse inbred maize lines for polymorphism identification within any maize gene sequence; four Quantitative Trait Loci (QTL) mapping populations and one association mapping panel, all phenotyped for aflatoxin accumulation resistance and associated phenotypes; and capacity for Insertion/Deletion (InDel) and SNP genotyping in the population(s) for mapping. To date, ten genes have been identified as possible candidate genes and put through the candidate gene testing pipeline, and results are presented here to demonstrate the utility of the pipeline.

Late Quaternary offset of alluvial fan surfaces along the Central Sierra Madre Fault, southern California

USGS Publications Warehouse

Burgette, Reed J.; Hanson, Austin; Scharer, Katherine M.; Midttun, Nikolas

2016-01-01

The Sierra Madre Fault is a reverse fault system along the southern flank of the San Gabriel Mountains near Los Angeles, California. This study focuses on the Central Sierra Madre Fault (CSMF) in an effort to provide numeric dating on surfaces with ages previously estimated from soil development alone. We have refined previous geomorphic mapping conducted in the western portion of the CSMF near Pasadena, CA, with the aid of new lidar data. This progress report focuses on our geochronology strategy employed in collecting samples and interpreting data to determine a robust suite of terrace surface ages. Sample sites for terrestrial cosmogenic nuclide and luminescence dating techniques were selected to be redundant and to be validated through relative geomorphic relationships between inset terrace levels. Additional sample sites were selected to evaluate the post-abandonment histories of terrace surfaces. We will combine lidar-derived displacement data with surface ages to estimate slip rates for the CSMF.

Remotely sensed soil moisture input to a hydrologic model

NASA Technical Reports Server (NTRS)

Engman, E. T.; Kustas, W. P.; Wang, J. R.

1989-01-01

The possibility of using detailed spatial soil moisture maps as input to a runoff model was investigated. The water balance of a small drainage basin was simulated using a simple storage model. Aircraft microwave measurements of soil moisture were used to construct two-dimensional maps of the spatial distribution of the soil moisture. Data from overflights on different dates provided the temporal changes resulting from soil drainage and evapotranspiration. The study site and data collection are described, and the soil measurement data are given. The model selection is discussed, and the simulation results are summarized. It is concluded that a time series of soil moisture is a valuable new type of data for verifying model performance and for updating and correcting simulated streamflow.

Mapping the literature of nursing informatics.

PubMed

Guenther, Johanna T

2006-04-01

This study was part of the Medical Library Association's Nursing and Allied Health Resources Section's project to map the nursing literature. It identified core journals in nursing informatics and the journals referenced in them and analyzed coverage of those journals in selected indexes. Five core journals were chosen and analyzed for 1996, 1997, and 1998. The references in the core journal articles were examined for type and number of formats cited during the selected time period. Bradford's Law of Scattering divided the journals into frequency zones. The time interval, 1990 to 1998, produced 71% of the references. Internet references could not be tracked by date before 1990. Twelve journals were the most productive, 119 journals were somewhat productive, and 897 journals were the least productive. Journal of the American Medical Informatics Association was the most prolific core journal. The 1998 journal references were compared in CINAHL, PubMed/MEDLINE, Science Citation Index, and OCLC Article First. PubMed/MEDLINE had the highest indexing score.

Mapping the literature of nursing informatics

PubMed Central

Guenther, Johanna T.

2006-01-01

Objective: This study was part of the Medical Library Association's Nursing and Allied Health Resources Section's project to map the nursing literature. It identified core journals in nursing informatics and the journals referenced in them and analyzed coverage of those journals in selected indexes. Method: Five core journals were chosen and analyzed for 1996, 1997, and 1998. The references in the core journal articles were examined for type and number of formats cited during the selected time period. Bradford's Law of Scattering divided the journals into frequency zones. Results: The time interval, 1990 to 1998, produced 71% of the references. Internet references could not be tracked by date before 1990. Twelve journals were the most productive, 119 journals were somewhat productive, and 897 journals were the least productive. Journal of the American Medical Informatics Association was the most prolific core journal. The 1998 journal references were compared in CINAHL, PubMed/MEDLINE, Science Citation Index, and OCLC Article First. PubMed/MEDLINE had the highest indexing score. PMID:16710469

Weak Gravitational Lensing by the Nearby Cluster Abell 3667.

PubMed

Joffre; Fischer; Frieman; McKay; Mohr; Nichol; Johnston; Sheldon; Bernstein

2000-05-10

We present two weak lensing reconstructions of the nearby (zcl=0.055) merging cluster Abell 3667, based on observations taken approximately 1 yr apart under different seeing conditions. This is the lowest redshift cluster with a weak lensing mass reconstruction to date. The reproducibility of features in the two mass maps demonstrates that weak lensing studies of low-redshift clusters are feasible. These data constitute the first results from an X-ray luminosity-selected weak lensing survey of 19 low-redshift (z<0.1) southern clusters.

[The representation of population density in school atlases: a critical examination of population maps].

PubMed

Schroder, P

1997-01-01

The author critiques the way population density is represented in school atlases, focusing on those used in German-speaking countries. After a discussion of the methodological problems underlying such representations, he selects examples from several German atlases to illustrate the transmission of contradictory, misleading, or out-of-date information. He also suggests ways to improve this situation, including better teaching of underlying cartographical issues and the use of a dot system to illustrate population density.

Radiometric dates from Alaska: A 1975 compilation

USGS Publications Warehouse

Turner, D.L.; Grybeck, Donald; Wilson, Frederic H.

1975-01-01

The following table of radiometric dates from Alaska includes published material through 1972 as well as some selected later data. The table includes 726 mineral and whole-rock dates determined by the K-Ar, Rb-Sr, fission-track U-Pb, and Pb-alpha techniques.The data are organized in alphabetical order of the 1:250,000 scale quadrangles in which the dated rocks are located. The latitude and longitude of each sample are given. In addition, each sample is located on a 1:250,000 quadrangle map by a grid system. The initial point of the grid is taken as the southwest corner of the quadrangle and the location of the sample is measured in inches east and inches north from that corner, e.g., "156E 126N" indicated 15.6 inches east and 12.6 inches north of the southwest corner of the quadrangle. Zeroes in the location columns for some dates indicate that accurate locations are not available.Rock type, dating method, mineral dated, radiometric age, sample identification number, and reference are also listed where possible. Short comments, mostly geographic locality names, are given for some dates. These comments have been taken from the original references.Sample identification numbers beginning with "AA" or "BB" have been assigned arbitrarily in cases where sample numbers were not assigned in the original references. Abbreviations are explained in the appendix at the end of table 1.

Crater-based dating of geological units on Mars: methods and application for the new global geological map

USGS Publications Warehouse

Platz, Thomas; Michael, Gregory; Tanaka, Kenneth L.; Skinner, James A.; Fortezzo, Corey M.

2013-01-01

The new, post-Viking generation of Mars orbital imaging and topographical data provide significant higher-resolution details of surface morphologies, which induced a new effort to photo-geologically map the surface of Mars at 1:20,000,000 scale. Although from unit superposition relations a relative stratigraphical framework can be compiled, it was the ambition of this mapping project to provide absolute unit age constraints through crater statistics. In this study, the crater counting method is described in detail, starting with the selection of image data, type locations (both from the mapper’s and crater counter’s perspectives) and the identification of impact craters. We describe the criteria used to validate and analyse measured crater populations, and to derive and interpret crater model ages. We provide examples of how geological information about the unit’s resurfacing history can be retrieved from crater size–frequency distributions. Three cases illustrate short-, intermediate, and long-term resurfacing histories. In addition, we introduce an interpretation-independent visualisation of the crater resurfacing history that uses the reduction of the crater population in a given size range relative to the expected population given the observed crater density at larger sizes. From a set of potential type locations, 48 areas from 22 globally mapped units were deemed suitable for crater counting. Because resurfacing ages were derived from crater statistics, these secondary ages were used to define the unit age rather than the base age. Using the methods described herein, we modelled ages that are consistent with the interpreted stratigraphy. Our derived model ages allow age assignments to be included in unit names. We discuss the limitations of using the crater dating technique for global-scale geological mapping. Finally, we present recommendations for the documentation and presentation of crater statistics in publications.

APPLICATION OF MULTI-DATE LANDSAT 5 TIM IMAGERY FOR WETLAND IDENTIFICATION

EPA Science Inventory

Multi-temporal Landsat 5 Thematic Mapper (TM) imagery was evaluated for the identification and monitoring of potential jurisdictional wetlands located in the states of Maryland and Delaware. A wetland map prepared from single-date TM imagery was compared to a hybrid map develope...

187. Photocopy of drawing, Twin Falls Canal Company, date unknown. ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

187. Photocopy of drawing, Twin Falls Canal Company, date unknown. TOPOGRAPHICAL MAP OF MILNER DAM LOCATION, TWIN FALLS COUNTY, MILNER, IDAHO; BLUEPRINT MAP. - Milner Dam & Main Canal: Twin Falls Canal Company, On Snake River, 11 miles West of city of Burley, Idaho, Twin Falls, Twin Falls County, ID

77 FR 21880 - Federal Housing Administration (FHA): Multifamily Accelerated Processing-Enhancing and...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-12

... applications for FHA multifamily mortgage insurance, which generally involve the refinance, purchase, new... to date through direct instructions to FHA-approved lenders under a MAP Guide. Given its experience... mortgage insurance programs. Based on HUD's experience to date with MAP, this proposed rule strives not...

Improving the mapping of crop types in the Midwestern U.S. by fusing Landsat and MODIS satellite data

NASA Astrophysics Data System (ADS)

Zhu, Likai; Radeloff, Volker C.; Ives, Anthony R.

2017-06-01

Mapping crop types is of great importance for assessing agricultural production, land-use patterns, and the environmental effects of agriculture. Indeed, both radiometric and spatial resolution of Landsat's sensors images are optimized for cropland monitoring. However, accurate mapping of crop types requires frequent cloud-free images during the growing season, which are often not available, and this raises the question of whether Landsat data can be combined with data from other satellites. Here, our goal is to evaluate to what degree fusing Landsat with MODIS Nadir Bidirectional Reflectance Distribution Function (BRDF)-Adjusted Reflectance (NBAR) data can improve crop-type classification. Choosing either one or two images from all cloud-free Landsat observations available for the Arlington Agricultural Research Station area in Wisconsin from 2010 to 2014, we generated 87 combinations of images, and used each combination as input into the Spatial and Temporal Adaptive Reflectance Fusion Model (STARFM) algorithm to predict Landsat-like images at the nominal dates of each 8-day MODIS NBAR product. Both the original Landsat and STARFM-predicted images were then classified with a support vector machine (SVM), and we compared the classification errors of three scenarios: 1) classifying the one or two original Landsat images of each combination only, 2) classifying the one or two original Landsat images plus all STARFM-predicted images, and 3) classifying the one or two original Landsat images together with STARFM-predicted images for key dates. Our results indicated that using two Landsat images as the input of STARFM did not significantly improve the STARFM predictions compared to using only one, and predictions using Landsat images between July and August as input were most accurate. Including all STARFM-predicted images together with the Landsat images significantly increased average classification error by 4% points (from 21% to 25%) compared to using only Landsat images. However, incorporating only STARFM-predicted images for key dates decreased average classification error by 2% points (from 21% to 19%) compared to using only Landsat images. In particular, if only a single Landsat image was available, adding STARFM predictions for key dates significantly decreased the average classification error by 4 percentage points from 30% to 26% (p < 0.05). We conclude that adding STARFM-predicted images can be effective for improving crop-type classification when only limited Landsat observations are available, but carefully selecting images from a full set of STARFM predictions is crucial. We developed an approach to identify the optimal subsets of all STARFM predictions, which gives an alternative method of feature selection for future research.

New generation of integrated geological-geomorphological reconstruction maps in the Rhine-Meuse delta, The Netherlands

NASA Astrophysics Data System (ADS)

Pierik, Harm Jan; Cohen, Kim; Stouthamer, Esther

2016-04-01

Geological-geomorphological reconstructions are important for integrating diverse types of data and improving understanding of landscape formation processes. This works especially well in densely populated Holocene landscapes, where large quantities of raw data are produced by geotechnical, archaeological, soil science and hydrological communities as well as in academic research. The Rhine-Meuse delta, The Netherlands, has a long tradition of integrated digital reconstruction maps and databases. This contributed to improve understanding of delta evolution, especially regarding the channel belt network evolution. In this contribution, we present a new generation of digital map products for the Holocene Rhine-Meuse delta. Our reconstructions expand existing channel belt network maps, with new map layers containing natural levee extent and relative elevation. The maps we present have been based on hundreds of thousands of lithological borehole descriptions, >1000 radiocarbon dates, and further integrate LIDAR data, soil maps and archaeological information. For selected time slices through the Late Holocene, the map products describe the patterns of levee distribution. Additionally, we mapped the palaeo-topography of the levees through the delta, aiming to resolve what parts of the overbank river landscape were the relatively low and high positioned areas in the past landscape. The resulting palaeogeographical maps are integrative products created for a very data-rich research area. They will allow for delta-wide analysis in studying changes in the Late Holocene landscape and the interaction with past habitation.

Paleoglaciology of the Ala-Archa and Ak-Shyrak areas, Kyrgyz Tian Shan

NASA Astrophysics Data System (ADS)

Blomdin, R.; Beel, C.; Caffee, M. W.; Codilean, A.; Gribenski, N.; Harbor, J.; Heyman, J.; Hattestrand, C.; Ivanov, M.; Kassab, C.; Lifton, N. A.; Petrakov, D.; Rogozhina, I.; Stroeven, A. P.; Usubaliev, R.

2012-12-01

We employed detailed glacial geomorphological mapping of the Ala-Archa and Ak-Shyrak areas, Kyrgyz Tian Shan (Shan = Mountains) to build a paleoglaciological reconstruction. These two areas were selected because their glaciers constitute important freshwater reservoirs for downstream communities (the Kyrgyz capital Bishkek, and cities along the Syr Darja which drains towards the Aral Sea, respectively), and because fluctuations in their extent cause both variations in water supply and risks for glacial hazards. Five landform categories were mapped; glacial valleys, marginal moraines, glacial lineations, hummocky terrain, and melt-water channels. These landforms were mapped using a SRTM digital elevation model (DEM) with a 90 m resolution, Landsat 7 ETM+ satellite imagery with a 30 m resolution, Aster GDEM with a 30 m resolution, and Google Earth. This remotely sensed mapping was also checked and complemented by field mapping. The distribution of mapped landforms indicates restricted glaciations, mainly concentrated to the mountain areas. In both ranges marginal moraines extend beyond the furthest extent of glacial valleys. Furthermore, extensive areas of hummocky moraine in Ak-Shyrak extending beyond montane glacial valleys indicate glacial extents into the intermontane basins. Several series of lateral and terminal moraines in the Ala-Archa and Ak-Shyrak ranges have been identified and sampled for cosmogenic nuclide 10Be dating, while associated glaciofluvial sediment was sampled for optically-stimulated luminescence (OSL) and electron spin resonance (ESR) dating. Future work will involve using these samples to build a consistent chronology for glaciation and investigation of contrasts between paleoglaciological reconstructions of valleys within a single range but with different aspects, as well as between ranges. In the final stages of the project we will use intermediate complexity glacier flow models to examine paleoclimatic implications of the observed spatial and temporal patterns of glacier changes, focused in particular on the last glacial cycle.

Classification of irrigated land using satellite imagery, the High Plains aquifer, nominal date 1992

USGS Publications Warehouse

Qi, Sharon L.; Konduris, Alexandria; Litke, David W.; Dupree, Jean

2002-01-01

Satellite imagery from the Landsat Thematic Mapper (nominal date 1992) was used to classify and map the location of irrigated land across the High Plains aquifer. The High Plains aquifer underlies 174,000 square miles in parts of Colorado, Kansas, Nebraska, New Mexico, Oklahoma, South Dakota, Texas, and Wyoming. The U.S. Geological Survey is conducting a waterquality study of the High Plains aquifer as part of the National Water-Quality Assessment Program. To help interpret data and select sites for the study, it is helpful to know the location of irrigated land within the study area. To date, the only information available for the entire area is 20 years old. To update the data on irrigated land, 40 summer and 40 spring images (nominal date 1992) were acquired from the National Land Cover Data set and processed using a band-ratio method (Landsat Thematic Mapper band 4 divided by band 3) to enhance the vegetation signatures. The study area was divided into nine subregions with similar environmental characteristics, and a band-ratio threshold was selected from imagery in each subregion that differentiated the cutoff between irrigated and nonirrigated land. The classified images for each subregion were mosaicked to produce an irrigated land map for the study area. The total amount of irrigated land classified from the 1992 imagery was 13.1 million acres, or about 12 percent of the total land in the High Plains. This estimate is approximately 1.5 percent greater than the amount of irrigated land reported in the 1992 Census of Agriculture (12.8 millions acres). This information was also compared to a similar data set based on 1980 imagery. The 1980 data classified 13.7 million acres as irrigated. Although the change in the amount of irrigated land between the two times was not substantial, the location of the irrigated land did shift from areas where there were large ground-water-level declines to other areas where ground-water levels were static or rising.

A comprehensive map of the porcine genome.

PubMed

Rohrer, G A; Alexander, L J; Hu, Z; Smith, T P; Keele, J W; Beattie, C W

1996-05-01

We report the highest density genetic linkage map for a livestock species produced to date. Three published maps for Sus scrofa were merged by genotyping virtually every publicly available microsatellite across a single reference population to yield 1042 linked loci, 536 of which are novel assignments, spanning 2286.2 cM (average interval 2.23 cM) in 19 linkage groups (18 autosomal and X chromosomes, n = 19). Linkage groups were constructed de novo and mapped by locus content to avoid propagation of errors in older genotypes. The physical and genetic maps were integrated with 123 informative loci assigned previously by fluorescence in situ hybridization (FISH). Fourteen linkage groups span the entire length of each chromosome. Coverage of chromosomes 11, 12, 15, and 18 will be evaluated as more markers are physically assigned. Marker-deficient regions were identified only on 11q1.7-qter and 14 cen-q1.2. Recombination rates (cM/Mbp) varied between and within chromosomes. Short chromosomal arms recombined at higher rates than long arms, and recombination was more frequent in telomeric regions than in pericentric regions. The high-resolution comprehensive map has the marker density needed to identify quantitative trait loci (QTL), implement marker-assisted selection or introgression and YAC contig construction or chromosomal microdissection.

1. PHOTOGRAPHIC COPY OF MAP OF FORT BLISS DATED JUNE ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. PHOTOGRAPHIC COPY OF MAP OF FORT BLISS DATED JUNE 15, 1934, REVISED TO JUNE 1, 1940, DRAWING No. FB-DWG-434, ORIGINAL ON FILE IN DIRECTORATE OF FACILITIES ENGINEERING, FORT BLISS - Fort Bliss, 7th Cavalry Buildings, U.S. Army Air Defence Artillery Center & Fort Bliss, El Paso, El Paso County, TX

Cross-terminology mapping challenges: a demonstration using medication terminological systems.

PubMed

Saitwal, Himali; Qing, David; Jones, Stephen; Bernstam, Elmer V; Chute, Christopher G; Johnson, Todd R

2012-08-01

Standardized terminological systems for biomedical information have provided considerable benefits to biomedical applications and research. However, practical use of this information often requires mapping across terminological systems-a complex and time-consuming process. This paper demonstrates the complexity and challenges of mapping across terminological systems in the context of medication information. It provides a review of medication terminological systems and their linkages, then describes a case study in which we mapped proprietary medication codes from an electronic health record to SNOMED CT and the UMLS Metathesaurus. The goal was to create a polyhierarchical classification system for querying an i2b2 clinical data warehouse. We found that three methods were required to accurately map the majority of actively prescribed medications. Only 62.5% of source medication codes could be mapped automatically. The remaining codes were mapped using a combination of semi-automated string comparison with expert selection, and a completely manual approach. Compound drugs were especially difficult to map: only 7.5% could be mapped using the automatic method. General challenges to mapping across terminological systems include (1) the availability of up-to-date information to assess the suitability of a given terminological system for a particular use case, and to assess the quality and completeness of cross-terminology links; (2) the difficulty of correctly using complex, rapidly evolving, modern terminologies; (3) the time and effort required to complete and evaluate the mapping; (4) the need to address differences in granularity between the source and target terminologies; and (5) the need to continuously update the mapping as terminological systems evolve. Copyright © 2012 Elsevier Inc. All rights reserved.

Cross-terminology mapping challenges: A demonstration using medication terminological systems

PubMed Central

Saitwal, Himali; Qing, David; Jones, Stephen; Bernstam, Elmer; Chute, Christopher G.; Johnson, Todd R.

2015-01-01

Standardized terminological systems for biomedical information have provided considerable benefits to biomedical applications and research. However, practical use of this information often requires mapping across terminological systems—a complex and time-consuming process. This paper demonstrates the complexity and challenges of mapping across terminological systems in the context of medication information. It provides a review of medication terminological systems and their linkages, then describes a case study in which we mapped proprietary medication codes from an electronic health record to SNOMED-CT and the UMLS Metathesaurus. The goal was to create a polyhierarchical classification system for querying an i2b2 clinical data warehouse. We found that three methods were required to accurately map the majority of actively prescribed medications. Only 62.5% of source medication codes could be mapped automatically. The remaining codes were mapped using a combination of semi-automated string comparison with expert selection, and a completely manual approach. Compound drugs were especially difficult to map: only 7.5% could be mapped using the automatic method. General challenges to mapping across terminological systems include (1) the availability of up-to-date information to assess the suitability of a given terminological system for a particular use case, and to assess the quality and completeness of cross-terminology links; (2) the difficulty of correctly using complex, rapidly evolving, modern terminologies; (3) the time and effort required to complete and evaluate the mapping; (4) the need to address differences in granularity between the source and target terminologies; and (5) the need to continuously update the mapping as terminological systems evolve. PMID:22750536

Updating the planetary time scale: focus on Mars

USGS Publications Warehouse

Tanaka, Kenneth L.; Quantin-Nataf, Cathy

2013-01-01

Formal stratigraphic systems have been developed for the surface materials of the Moon, Mars, Mercury, and the Galilean satellite Ganymede. These systems are based on geologic mapping, which establishes relative ages of surfaces delineated by superposition, morphology, impact crater densities, and other relations and features. Referent units selected from the mapping determine time-stratigraphic bases and/or representative materials characteristic of events and periods for definition of chronologic units. Absolute ages of these units in some cases can be estimated using crater size-frequency data. For the Moon, the chronologic units and cratering record are calibrated by radiometric ages measured from samples collected from the lunar surface. Model ages for other cratered planetary surfaces are constructed primarily by estimating cratering rates relative to that of the Moon. Other cratered bodies with estimated surface ages include Venus and the Galilean satellites of Jupiter. New global geologic mapping and crater dating studies of Mars are resulting in more accurate and detailed reconstructions of its geologic history.

Chemical, petrographic, and K-Ar age data to accompany reconnaissance geologic strip map from Kingman to south of Bill Williams Mountain, Arizona

DOE Office of Scientific and Technical Information (OSTI.GOV)

Arney, B.; Goff, F.; Eddy, A.C.

1985-04-01

As part of a reconnaissance mapping project, 40 chemical analyses and 13 potassium-argon age dates were obtained for Tertiary volcanic and Precambrian granitic rocks between Kingman and Bill Williams Mountain, Arizona. The dated volcanic rocks range in age from 5.5 +- 0.2 Myr for basalt in the East Juniper Mountains to about 25 Myr for a biotite-pyroxene andesite. The date for Picacho Butte, a rhyodacite in the Mt. Floyd volcanic field, was 9.8 +- 0.07 Myr, making it the oldest rhyodacite dome in that volcanic field. Dated rocks in the Fort Rock area range from 20.7 to 24.3 Myr. Nomore » ages were obtained on the Precambrian rocks. Compositionally, the volcanic rocks analyzed range from alkali basalt to rhyolite, but many rocks on the western side of the map area are unusually potassic. The granites chosen for analysis include syenogranite from the Hualapai Mountains, a muscovite granite from the Picacho Butte area, and two other granites. The chemical and K-Ar age data and petrographic descriptions included in this report accompany the reconnaissance geologic strip map published as LA-9202-MAP by Goff, Eddy, and Arney. 9 refs., 4 figs., 2 tabs.« less

192. Photocopy of drawing, Twin Falls Canal Company, date unknown. ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

192. Photocopy of drawing, Twin Falls Canal Company, date unknown. TOPOGRAPHICAL MAP (DAM DRAWN IN), MILNER SITE, TWIN FALLS COUNTY, MILNER, IDAHO; RIGHT SIDE OF MAP (LEFT ON ID-15-183). - Milner Dam & Main Canal: Twin Falls Canal Company, On Snake River, 11 miles West of city of Burley, Idaho, Twin Falls, Twin Falls County, ID

Genetic basis of climatic adaptation in scots pine by bayesian quantitative trait locus analysis.

PubMed Central

Hurme, P; Sillanpää, M J; Arjas, E; Repo, T; Savolainen, O

2000-01-01

We examined the genetic basis of large adaptive differences in timing of bud set and frost hardiness between natural populations of Scots pine. As a mapping population, we considered an "open-pollinated backcross" progeny by collecting seeds of a single F(1) tree (cross between trees from southern and northern Finland) growing in southern Finland. Due to the special features of the design (no marker information available on grandparents or the father), we applied a Bayesian quantitative trait locus (QTL) mapping method developed previously for outcrossed offspring. We found four potential QTL for timing of bud set and seven for frost hardiness. Bayesian analyses detected more QTL than ANOVA for frost hardiness, but the opposite was true for bud set. These QTL included alleles with rather large effects, and additionally smaller QTL were supported. The largest QTL for bud set date accounted for about a fourth of the mean difference between populations. Thus, natural selection during adaptation has resulted in selection of at least some alleles of rather large effect. PMID:11063704

Alternative Fueling Station Locator - Android

DOE Office of Scientific and Technical Information (OSTI.GOV)

The Alternative Fueling Station Locator app helps users locate fueling stations that offer electricity, natural gas, biodiesel, E85, propane, or hydrogen. The users' current location or a custom location can be used to find the 20 closest stations within a 30-mile radius. View the stations on a map or see a list of stations ordered by distance from your location. Select your alternative fuel of choice and adjust the custom filters to fit your needs. Select a station from the map or list to view contact info and other details: address, phone number, and hours of operation; payment types accepted;more » public or private access; special services; compression (natural gas); vehicle size access (natural gas); number and types of chargers (electric); blends available (biodiesel); and blender pumps (ethanol) The app draws information from the U.S. Department of Energy's Alternative Fuels Data Center, which houses the most comprehensive, up-to-date database of alternative fueling stations in the United States. The database contains location information for more than 20,000 alternative fueling stations throughout the country.« less

Multi-Collinearity Based Model Selection for Landslide Susceptibility Mapping: A Case Study from Ulus District of Karabuk, Turkey

NASA Astrophysics Data System (ADS)

Sahin, E. K.; Colkesen, I., , Dr; Kavzoglu, T.

2017-12-01

Identification of localities prone to landslide areas plays an important role for emergency planning, disaster management and recovery planning. Due to its great importance for disaster management, producing accurate and up-to-date landslide susceptibility maps is essential for hazard mitigation purpose and regional planning. The main objective of the present study was to apply multi-collinearity based model selection approach for the production of a landslide susceptibility map of Ulus district of Karabuk, Turkey. It is a fact that data do not contain enough information to describe the problem under consideration when the factors are highly correlated with each other. In such cases, choosing a subset of the original features will often lead to better performance. This paper presents multi-collinearity based model selection approach to deal with the high correlation within the dataset. Two collinearity diagnostic factors (Tolerance (TOL) and the Variance Inflation Factor (VIF)) are commonly used to identify multi-collinearity. Values of VIF that exceed 10.0 and TOL values less than 1.0 are often regarded as indicating multi-collinearity. Five causative factors (slope length, curvature, plan curvature, profile curvature and topographical roughness index) were found highly correlated with each other among 15 factors available for the study area. As a result, the five correlated factors were removed from the model estimation, and performances of the models including the remaining 10 factors (aspect, drainage density, elevation, lithology, land use/land cover, NDVI, slope, sediment transport index, topographical position index and topographical wetness index) were evaluated using logistic regression. The performance of prediction model constructed with 10 factors was compared to that of 15-factor model. The prediction performance of two susceptibility maps was evaluated by overall accuracy and the area under the ROC curve (AUC) values. Results showed that overall accuracy and AUC was calculated as 77.15% and 96.62% respectively for the model with 10 selected factors whilst they were estimated as 73.45% and 89.45% respectively for the model with all factors. It is clear that the multi-collinearity based model outperformed the conventional model in the mapping of landslide susceptibility.

LiDAR Mapping of Earthquake Uplifted Paleo-shorelines, Southern Wairarapa Coast, North Island, New Zealand

NASA Astrophysics Data System (ADS)

Valenciano, J.; Angenent, J.; Marshall, J. S.; Clark, K.; Litchfield, N. J.

2017-12-01

The Hikurangi subduction margin along the east coast of the North Island, New Zealand accommodates oblique convergence of the Pacific Plate westward beneath the Australian plate at 45 mm/yr. Pronounced forearc uplift occurs at the southern end of the margin along the Wairarapa coast, onshore of the subducting Hikurangi plateau. Along a narrow coastal lowland, a series of uplifted Holocene marine terraces and beach ridges preserve a geologic record of prehistoric coseismic uplift events. In January 2017, we participated in the Research Experience for Undergraduates (REU) program of the NSF SHIRE Project (Subduction at Hikurangi Integrated Research Experiment). We visited multiple coastal sites for reconnaissance fieldwork to select locations for future in-depth study. For the coastline between Flat Point and Te Kaukau Point, we used airborne LiDAR data provided by Land Information New Zealand (LINZ) to create ArcGIS digital terrain models for mapping and correlating uplifted paleo-shorelines. Terrace elevations derived from the LiDAR data were calibrated through the use of Real Time Kinematic (RTK) GPS surveying at one field site (Glenburn Station). Prior field mapping and radiocarbon dating results (Berryman et al., 2001; Litchfield and Clark, 2015) were used to guide our LiDAR mapping efforts. The resultant maps show between four and seven uplifted terraces and associated beach ridges along this coastal segment. At some sites, terrace mapping and lateral correlation are impeded by discontinuous exposures and the presence of landslide debris, alluvial fan deposits, and sand dunes. Tectonic uplift along the southern Hikurangi margin is generated by a complex interaction between deep megathrust slip and shallow upper-plate faulting. Each uplifted Holocene paleo-shoreline is interpreted to represent a single coseismic uplift event. Continued mapping, surveying, and age dating may help differentiate between very large margin-wide megathrust earthquakes (M8.0-9.0+) and smaller, more localized upper-plate thrust events (M7.0-8.0). Both of these earthquake types pose a significant seismic and tsunami hazard for New Zealand residents.

A web-based tool for groundwater mapping and drought analysis

NASA Astrophysics Data System (ADS)

Christensen, S.; Burns, M.; Jones, N.; Strassberg, G.

2012-12-01

In 2011-2012, the state of Texas saw the worst one-year drought on record. Fluctuations in gravity measured by GRACE satellites indicate that as much as 100 cubic kilometers of water was lost during this period. Much of this came from reservoirs and shallow soil moisture, but a significant amount came from aquifers. In response to this crisis, a Texas Drought Technology Steering Committee (TDTSC) consisting of academics and water managers was formed to develop new tools and strategies to assist the state in monitoring, predicting, and responding to drought events. In this presentation, we describe one of the tools that was developed as part of this effort. When analyzing the impact of drought on groundwater levels, it is fairly common to examine time series data at selected monitoring wells. However, accurately assessing impacts and trends requires both spatial and temporal analysis involving the development of detailed water level maps at various scales. Creating such maps in a flexible and rapid fashion is critical for effective drought analysis, but can be challenging due to the massive amounts of data involved and the processing required to generate such maps. Furthermore, wells are typically not sampled at the same points in time, and so developing a water table map for a particular date requires both spatial and temporal interpolation of water elevations. To address this challenge, a Cloud-based water level mapping system was developed for the state of Texas. The system is based on the Texas Water Development Board (TWDB) groundwater database, but can be adapted to use other databases as well. The system involves a set of ArcGIS workflows running on a server with a web-based front end and a Google Earth plug-in. A temporal interpolation geoprocessing tool was developed to estimate the piezometric heads for all wells in a given region at a specific date using a regression analysis. This interpolation tool is coupled with other geoprocessing tools to filter data and interpolate point elevations spatially to produce water level, drawdown, and depth to groundwater maps. The web interface allows for users to generate these maps at locations and times of interest. A sequence of maps can be generated over a period of time and animated to visualize how water levels are changing. The time series regression analysis can also be used to do short-term predictions of future water levels.

Mapping stand-age distribution of Russian forests from satellite data

NASA Astrophysics Data System (ADS)

Chen, D.; Loboda, T. V.; Hall, A.; Channan, S.; Weber, C. Y.

2013-12-01

Russian boreal forest is a critical component of the global boreal biome as approximately two thirds of the boreal forest is located in Russia. Numerous studies have shown that wildfire and logging have led to extensive modifications of forest cover in the region since 2000. Forest disturbance and subsequent regrowth influences carbon and energy budgets and, in turn, affect climate. Several global and regional satellite-based data products have been developed from coarse (>100m) and moderate (10-100m) resolution imagery to monitor forest cover change over the past decade, record of forest cover change pre-dating year 2000 is very fragmented. Although by using stacks of Landsat images, some information regarding the past disturbances can be obtained, the quantity and locations of such stacks with sufficient number of images are extremely limited, especially in Eastern Siberia. This paper describes a modified method which is built upon previous work to hindcast the disturbance history and map stand-age distribution in the Russian boreal forest. Utilizing data from both Landsat and the Moderate Resolution Imaging Spectroradiometer (MODIS), a wall-to-wall map indicating the estimated age of forest in the Russian boreal forest is created. Our previous work has shown that disturbances can be mapped successfully up to 30 years in the past as the spectral signature of regrowing forests is statistically significantly different from that of mature forests. The presented algorithm ingests 55 multi-temporal stacks of Landsat imagery available over Russian forest before 2001 and processes through a standardized and semi-automated approach to extract training and validation data samples. Landsat data, dating back to 1984, are used to generate maps of forest disturbance using temporal shifts in Disturbance Index through the multi-temporal stack of imagery in selected locations. These maps are then used as reference data to train a decision tree classifier on 50 MODIS-based indices. The resultant map provides an estimate of forest age based on the regrowth curves observed from Landsat imagery. The accuracy of the resultant map is assessed against three datasets: 1) subset of the disturbance maps developed within the algorithm, 2) independent disturbance maps created by the Northern Eurasia Land Dynamics Analysis (NELDA) project, and 3) field-based stand-age distribution from forestry inventory units. The current version of the product presents a considerable improvement on the previous version which used Landsat data samples at a set of randomly selected locations, resulting a strong bias of the training samples towards the Landsat-rich regions (e.g. European Russia) whereas regions such as Siberia were under-sampled. Aiming at improving accuracy, the current method significantly increases the number of training Landsat samples compared to the previous work. Aside from the previously used data, the current method uses all available Landsat data for the under-sampled regions in order to increase the representativeness of the total samples. The finial accuracy assessment is still ongoing, however, the initial results suggested an overall accuracy expressed in Kappa > 0.8. We plan to release both the training data and the final disturbance map of the Russian boreal forest to the public after the validation is completed.

Geological Mapping of the Encounter Hemisphere on Pluto

NASA Astrophysics Data System (ADS)

White, O. L.; Moore, J. M.; Stern, S. A.; Weaver, H. A.; Olkin, C. B.; Ennico, K.; Young, L. A.; Cheng, A. F.; New Horizons GGI Theme Team

2016-06-01

We present mapping of Pluto's encounter hemisphere performed to date (focusing on Sputnik Planum and the immediately surrounding area) and offer preliminary descriptions of terrains further afield that will be the subject of future mapping.

Large-scale development of SSR markers in tobacco and construction of a linkage map in flue-cured tobacco

PubMed Central

Tong, Zhijun; Xiao, Bingguang; Jiao, Fangchan; Fang, Dunhuang; Zeng, Jianmin; Wu, Xingfu; Chen, Xuejun; Yang, Jiankang; Li, Yongping

2016-01-01

Tobacco (Nicotiana tabacum L.), particularly flue-cured tobacco, is one of the most economically important nonfood crops and is also an important model system in plant biotechnology. Despite its importance, only limited molecular marker resources are available for genome analysis, genetic mapping, and breeding. Simple sequence repeats (SSR) are one of the most widely-used molecular markers, having significant advantages including that they are generally co-dominant, easy to use, abundant in eukaryotic organisms, and produce highly reproducible results. In this study, based on the genome sequence data of flue-cured tobacco (K326), we developed a total of 13,645 mostly novel SSR markers, which were working in a set of eighteen tobacco varieties of four different types. A mapping population of 213 backcross (BC1) individuals, which were derived from an intra-type cross between two flue-cured tobacco varieties, Y3 and K326, was selected for mapping. Based on the newly developed SSR markers as well as published SSR markers, we constructed a genetic map consisting of 626 SSR loci distributed across 24 linkage groups and covering a total length of 1120.45 cM with an average distance of 1.79 cM between adjacent markers, which is the highest density map of flue-cured tobacco till date. PMID:27436948

Challenges and recent advances in mass spectrometric imaging of neurotransmitters

PubMed Central

Gemperline, Erin; Chen, Bingming; Li, Lingjun

2014-01-01

Mass spectrometric imaging (MSI) is a powerful tool that grants the ability to investigate a broad mass range of molecules, from small molecules to large proteins, by creating detailed distribution maps of selected compounds. To date, MSI has demonstrated its versatility in the study of neurotransmitters and neuropeptides of different classes toward investigation of neurobiological functions and diseases. These studies have provided significant insight in neurobiology over the years and current technical advances are facilitating further improvements in this field. neurotransmitters, focusing specifically on the challenges and recent Herein, we advances of MSI of neurotransmitters. PMID:24568355

Multitemporal WorldView satellites imagery for mapping chestnut trees

NASA Astrophysics Data System (ADS)

Marchetti, F.; Arbelo, M.; Moreno-Ruíz, J. A.; Hernández-Leal, P. A.; Alonso-Benito, A.

2017-10-01

Chestnuts have been part of the landscape and popular culture of the Canary Islands (Spain) since the sixteenth century. Many crops of this species are in state of abandonment and an updated mapping for its study and evaluation is needed. This work proposes the elaboration of this cartography using two satellite images of very high spatial resolution captured on two different dates and representing well-differentiated phenological states of the chestnut: a WorldView-2 image of March 10th, 2015 and a WorldView-3 image of May 12th, 2015 (without and with leaves respectively). Two study areas were selected within the municipality of La Orotava (Tenerife Island). One of the areas contains chestnut trees dispersed in an agricultural and semi-urban environment and in the other one, the specimens are grouped forming a forest merged with Canarian pines and other species of Monteverde. The Maximum Likelihood (ML), the Artificial Neural Networks (ANN) and the Spectral Angle Mapper (SAM) classification algorithms were applied to the multi-temporal image resulting from the combination of both dates. The results show the benefits of using the multi-temporal image for Pinolere with the ANN algorithm and for Chasna area with ML algorithm, in both cases providing an overall accuracy close to 95%.

43 CFR 3482.3 - Mining operations maps.

Code of Federal Regulations, 2012 CFR

2012-10-01

... and up-to-date maps of the mine, drawn to scales acceptable to the authorized officer. Before a mine... boundary lines; surface buildings; dip of the coal bed(s); true north; map scale; map explanation; location...; geologic conditions as determined from outcrops, drill holes, exploration, or mining; any unusual geologic...

43 CFR 3482.3 - Mining operations maps.

Code of Federal Regulations, 2013 CFR

2013-10-01

... and up-to-date maps of the mine, drawn to scales acceptable to the authorized officer. Before a mine... boundary lines; surface buildings; dip of the coal bed(s); true north; map scale; map explanation; location...; geologic conditions as determined from outcrops, drill holes, exploration, or mining; any unusual geologic...

43 CFR 3482.3 - Mining operations maps.

Code of Federal Regulations, 2014 CFR

2014-10-01

... and up-to-date maps of the mine, drawn to scales acceptable to the authorized officer. Before a mine... boundary lines; surface buildings; dip of the coal bed(s); true north; map scale; map explanation; location...; geologic conditions as determined from outcrops, drill holes, exploration, or mining; any unusual geologic...

Development of pachytene FISH maps for six maize chromosomes and their integration with other maize maps for insights into genome structure variation.

PubMed

Figueroa, Debbie M; Bass, Hank W

2012-05-01

Integrated cytogenetic pachytene fluorescence in situ hybridization (FISH) maps were developed for chromosomes 1, 3, 4, 5, 6, and 8 of maize using restriction fragment length polymorphism marker-selected Sorghum propinquum bacterial artificial chromosomes (BACs) for 19 core bin markers and 4 additional genetic framework loci. Using transgenomic BAC FISH mapping on maize chromosome addition lines of oats, we found that the relative locus position along the pachytene chromosome did not change as a function of total arm length, indicative of uniform axial contraction along the fibers during mid-prophase for tested loci on chromosomes 4 and 5. Additionally, we cytogenetically FISH mapped six loci from chromosome 9 onto their duplicated syntenic regions on chromosomes 1 and 6, which have varying amounts of sequence divergence, using sorghum BACs homologous to the chromosome 9 loci. We found that successful FISH mapping was possible even when the chromosome 9 selective marker had no counterpart in the syntenic block. In total, these 29 FISH-mapped loci were used to create the most extensive pachytene FISH maps to date for these six maize chromosomes. The FISH-mapped loci were then merged into one composite karyotype for direct comparative analysis with the recombination nodule-predicted cytogenetic, genetic linkage, and genomic physical maps using the relative marker positions of the loci on all the maps. Marker colinearity was observed between all pair-wise map comparisons, although marker distribution patterns varied widely in some cases. As expected, we found that the recombination nodule-based predictions most closely resembled the cytogenetic map positions overall. Cytogenetic and linkage map comparisons agreed with previous studies showing a decrease in marker spacing in the peri-centromeric heterochromatin region on the genetic linkage maps. In fact, there was a general trend with most loci mapping closer towards the telomere on the linkage maps than on the cytogenetic maps, regardless of chromosome number or maize inbred line source, with just some of the telomeric loci exempted. Finally and somewhat surprisingly, we observed considerable variation between the relative arm positions of loci when comparing our cytogenetic FISH map to the B73 genomic physical maps, even where comparisons were to a B73-derived cytogenetic map. This variation is more evident between different chromosome arms, but less so within a given arm, ruling out any type of inbred-line dependent global features of linear deoxyribonucleic acid compared with the meiotic fiber organization. This study provides a means for analyzing the maize genome structure by producing new connections for integrating the cytogenetic, linkage, and physical maps of maize.

Seasonal trends in separability of leaf reflectance spectra for Ailanthus altissima and four other tree species

NASA Astrophysics Data System (ADS)

Burkholder, Aaron

This project investigated the spectral separability of the invasive species Ailanthus altissima, commonly called tree of heaven, and four other native species. Leaves were collected from Ailanthus and four native tree species from May 13 through August 24, 2008, and spectral reflectance factor measurements were gathered for each tree using an ASD (Boulder, Colorado) FieldSpec Pro full-range spectroradiometer. The original data covered the range from 350-2500 nm, with one reflectance measurement collected per one nm wavelength. To reduce dimensionality, the measurements were resampled to the actual resolution of the spectrometer's sensors, and regions of atmospheric absorption were removed. Continuum removal was performed on the reflectance data, resulting in a second dataset. For both the reflectance and continuum removed datasets, least angle regression (LARS) and random forest classification were used to identify a single set of optimal wavelengths across all sampled dates, a set of optimal wavelengths for each date, and the dates for which Ailanthus is most separable from other species. It was found that classification accuracy varies both with dates and bands used. Contrary to expectations that early spring would provide the best separability, the lowest classification error was observed on July 22 for the reflectance data, and on May 13, July 11 and August 1 for the continuum removed data. This suggests that July and August are also potentially good months for species differentiation. Applying continuum removal in many cases reduced classification error, although not consistently. Band selection seems to be more important for reflectance data in that it results in greater improvement in classification accuracy, and LARS appears to be an effective band selection tool. The optimal spectral bands were selected from across the spectrum, often with bands from the blue (401-431 nm), NIR (1115 nm) and SWIR (1985-1995 nm), suggesting that hyperspectral sensors with broad wavelength sensitivity are important for mapping and identification of Ailanthus.

Evaluation and comparison of ERTS measurements of major crops and soil associations for selected test sites in the central United States. [Texas, Indiana, Kansas, Iowa, Nebraska, and North Dakota

NASA Technical Reports Server (NTRS)

Baumgardner, M. F. (Principal Investigator)

1974-01-01

The author has identified the following significant results. Multispectral scanner data obtained by ERTS-1 over six test sites in the Central United States were analyzed and interpreted. ERTS-1 data for some of the test sites were geometrically corrected and temporally overlayed. Computer-implemented pattern recognition techniques were used in the analysis of all multispectral data. These techniques were used to evaluate ERTS-1 data as a tool for soil survey. Geology maps and land use inventories were prepared by digital analysis of multispectral data. Identification and mapping of crop species and rangelands were achieved throught the analysis of 1972 and 1973 ERTS-1 data. Multiple dates of ERTS-1 data were examined to determine the variation with time of the areal extent of surface water resources on the Southern Great Plain.

Functional expansion representations of artificial neural networks

NASA Technical Reports Server (NTRS)

Gray, W. Steven

1992-01-01

In the past few years, significant interest has developed in using artificial neural networks to model and control nonlinear dynamical systems. While there exists many proposed schemes for accomplishing this and a wealth of supporting empirical results, most approaches to date tend to be ad hoc in nature and rely mainly on heuristic justifications. The purpose of this project was to further develop some analytical tools for representing nonlinear discrete-time input-output systems, which when applied to neural networks would give insight on architecture selection, pruning strategies, and learning algorithms. A long term goal is to determine in what sense, if any, a neural network can be used as a universal approximator for nonliner input-output maps with memory (i.e., realized by a dynamical system). This property is well known for the case of static or memoryless input-output maps. The general architecture under consideration in this project was a single-input, single-output recurrent feedforward network.

A face-selective ventral occipito-temporal map of the human brain with intracerebral potentials

PubMed Central

Jonas, Jacques; Jacques, Corentin; Liu-Shuang, Joan; Brissart, Hélène; Colnat-Coulbois, Sophie; Maillard, Louis; Rossion, Bruno

2016-01-01

Human neuroimaging studies have identified a network of distinct face-selective regions in the ventral occipito-temporal cortex (VOTC), with a right hemispheric dominance. To date, there is no evidence for this hemispheric and regional specialization with direct measures of brain activity. To address this gap in knowledge, we recorded local neurophysiological activity from 1,678 contact electrodes implanted in the VOTC of a large group of epileptic patients (n = 28). They were presented with natural images of objects at a rapid fixed rate (six images per second: 6 Hz), with faces interleaved as every fifth stimulus (i.e., 1.2 Hz). High signal-to-noise ratio face-selective responses were objectively (i.e., exactly at the face stimulation frequency) identified and quantified throughout the whole VOTC. Face-selective responses were widely distributed across the whole VOTC, but also spatially clustered in specific regions. Among these regions, the lateral section of the right middle fusiform gyrus showed the largest face-selective response by far, offering, to our knowledge, the first supporting evidence of two decades of neuroimaging observations with direct neural measures. In addition, three distinct regions with a high proportion of face-selective responses were disclosed in the right ventral anterior temporal lobe, a region that is undersampled in neuroimaging because of magnetic susceptibility artifacts. A high proportion of contacts responding only to faces (i.e., “face-exclusive” responses) were found in these regions, suggesting that they contain populations of neurons involved in dedicated face-processing functions. Overall, these observations provide a comprehensive mapping of visual category selectivity in the whole human VOTC with direct neural measures. PMID:27354526

Updating flood maps efficiently using existing hydraulic models, very-high-accuracy elevation data, and a geographic information system; a pilot study on the Nisqually River, Washington

USGS Publications Warehouse

Jones, Joseph L.; Haluska, Tana L.; Kresch, David L.

2001-01-01

A method of updating flood inundation maps at a fraction of the expense of using traditional methods was piloted in Washington State as part of the U.S. Geological Survey Urban Geologic and Hydrologic Hazards Initiative. Large savings in expense may be achieved by building upon previous Flood Insurance Studies and automating the process of flood delineation with a Geographic Information System (GIS); increases in accuracy and detail result from the use of very-high-accuracy elevation data and automated delineation; and the resulting digital data sets contain valuable ancillary information such as flood depth, as well as greatly facilitating map storage and utility. The method consists of creating stage-discharge relations from the archived output of the existing hydraulic model, using these relations to create updated flood stages for recalculated flood discharges, and using a GIS to automate the map generation process. Many of the effective flood maps were created in the late 1970?s and early 1980?s, and suffer from a number of well recognized deficiencies such as out-of-date or inaccurate estimates of discharges for selected recurrence intervals, changes in basin characteristics, and relatively low quality elevation data used for flood delineation. FEMA estimates that 45 percent of effective maps are over 10 years old (FEMA, 1997). Consequently, Congress has mandated the updating and periodic review of existing maps, which have cost the Nation almost 3 billion (1997) dollars. The need to update maps and the cost of doing so were the primary motivations for piloting a more cost-effective and efficient updating method. New technologies such as Geographic Information Systems and LIDAR (Light Detection and Ranging) elevation mapping are key to improving the efficiency of flood map updating, but they also improve the accuracy, detail, and usefulness of the resulting digital flood maps. GISs produce digital maps without manual estimation of inundated areas between cross sections, and can generate working maps across a broad range of scales, for any selected area, and overlayed with easily updated cultural features. Local governments are aggressively collecting very-high-accuracy elevation data for numerous reasons; this not only lowers the cost and increases accuracy of flood maps, but also inherently boosts the level of community involvement in the mapping process. These elevation data are also ideal for hydraulic modeling, should an existing model be judged inadequate.

QTLs for heading date and plant height under multiple environments in rice.

PubMed

Han, Zhongmin; Hu, Wei; Tan, Cong; Xing, Yongzhong

2017-02-01

Both heading date and plant height are important traits related to grain yield in rice. In this study, a recombinant inbred lines (RILs) population was used to map quantitative trait loci (QTLs) for both traits under 3 long-day (LD) environments and 1 short-day (SD) environment. A total of eight QTLs for heading date and three QTLs for plant height were detected by composite interval mapping under LD conditions. Additional one QTL for heading date and three QTLs for plant height were identified by Two-QTL model under LD conditions. Among them, major QTLs qHd7.1, qHd7.2 and qHd8 for heading date, and qPh1 and qPh7.1 for plant height were commonly detected. qHd7.1 and qHd7.2 were mapped to small regions of less than 1 cM. Genome position comparison of previously cloned genes with QTLs detected in this study revealed that qHd5 and qPh3.1 were two novel QTLs. The alleles of these QTLs increasing trait values were dispersed in both parents, which well explained the transgressive segregation observed in this population. In addition, the interaction between qHd7.1 and qHd8 was detected under all LD conditions. Multiple-QTL model analysis revealed that all QTLs and their interactions explained over 80% of heading date variation and 50% of plant height variation. Two heading date QTLs were detected under SD condition. Of them, qHd10 were commonly identified under LD condition. The difference in QTL detection between LD and SD conditions indicated most heading date QTLs are sensitive to photoperiod. These findings will benefit breeding design for heading date and plant height in rice.

24 CFR 200.1535 - MAP Lender Review Board.

Code of Federal Regulations, 2010 CFR

2010-04-01

... or for good cause at the written request of a MAP lender, any time limit otherwise applicable under... issue written notice of violation to the MAP lender's contact person as listed on the Multifamily MAP... opportunity to request in writing, within 15 business days after the date of the issuance of the notice, to...

Checking collagen preservation in archaeological bone by non-destructive studies (Micro-CT and IBA)

NASA Astrophysics Data System (ADS)

Beck, L.; Cuif, J.-P.; Pichon, L.; Vaubaillon, S.; Dambricourt Malassé, A.; Abel, R. L.

2012-02-01

The material to be studied is a piece of human skull discovered (1999) in Pleistocene sediments from the Orsang river (Gujarat state, India). From anatomical view point, this skull is highly composite: modern Homo sapiens characters are associated to undoubtedly more ancient features. Absolute dating by 14C is critical to understand this discovery. Prior to dating measurements, non-destructive studies have been carried out. Micro-CT reconstruction (X-ray microtomography) and Ion Beam Analysis (IBA) have been undertaken to check the structural preservation of the fossil and the collagen preservation. PIXE elemental map was used to select well-preserved bone area. RBS/EBS and NRA were used for light element quantification, in particular C, N and O contents. We also demonstrate that the PIXE-RBS/EBS combination is a effective tool for the whole characterization of archaeological and recent bones by analysing in one experiment both mineral and organic fractions. We have shown that the archaeological bone, a fragment of the potentially oldest modern Indian, is enough preserved for radiocarbon dating. We propose that Elastic Backscattering Spectrometry (EBS) using 3 MeV protons could be a good non destructive alternative to conventional CHN method using Carbon-Hydrogen-Nitrogen analyzer for measuring C and N before 14C dating.

New Topographic Maps of Io Using Voyager and Galileo Stereo Imaging and Photoclinometry

NASA Astrophysics Data System (ADS)

White, O. L.; Schenk, P. M.; Hoogenboom, T.

2012-03-01

Stereo and photoclinometry processing have been applied to Voyager and Galileo images of Io in order to derive regional- and local-scale topographic maps of 20% of the moon’s surface to date. We present initial mapping results.

Mapping of magnetic chrons: paleomagnetic polarity map of East Iceland, 0-13 Myr

NASA Astrophysics Data System (ADS)

Helgason, Johann

2016-04-01

Through data on palaeomagnetism, stratigraphy and radiometric age dating an immense database on magnetic chrons has been established for the lava succession in Iceland (e.g. Kristjánsson, 2008). Correlation of magnetic chrons with the geomagnetic time scale provides a reasonable age estimate for vast stratigraphic sequences. The basalt lava succession in Iceland has a thickness of tens of kilometers. The magnetostratigraphic data offer, through the help of paleomagnetism and radiometric dating, a detailed timing of events in the evolution of the Iceland mantle plume region. Yet a magnetic polarity map for Iceland has been lacking but during the last 50 years, comprehensive stratigraphic mapping has paved the way for a magnetic polarity map in various parts of Iceland. Here, such a map is presented for a segment of East Iceland, i.e. for lavas ranging in age from 0 to 13 M yr. The map is a compilation based on various studies into the cliff section and stratigraphic work performed by numerous research initiatives, both in relation to hydroelectric research as well as academic projects. References: Kristjánsson, L., 2008. Paleomagnetic research on Icelandic lava flows. Jökull, 58, 101-116. Helgason, J., Duncan, R.A., Franzson, H., Guðmundsson, Á., and M. Riishuus., 2015. Magnetic polarity map of Akrafjall and Skarðsheiði and new 40Ar-39Ar age dating from West Iceland., Presentation at the spring conference of the Icelandic Geological Society, held on March 13th 2015 at the University of Iceland.

Recognizing lexical and semantic change patterns in evolving life science ontologies to inform mapping adaptation.

PubMed

Dos Reis, Julio Cesar; Dinh, Duy; Da Silveira, Marcos; Pruski, Cédric; Reynaud-Delaître, Chantal

2015-03-01

Mappings established between life science ontologies require significant efforts to maintain them up to date due to the size and frequent evolution of these ontologies. In consequence, automatic methods for applying modifications on mappings are highly demanded. The accuracy of such methods relies on the available description about the evolution of ontologies, especially regarding concepts involved in mappings. However, from one ontology version to another, a further understanding of ontology changes relevant for supporting mapping adaptation is typically lacking. This research work defines a set of change patterns at the level of concept attributes, and proposes original methods to automatically recognize instances of these patterns based on the similarity between attributes denoting the evolving concepts. This investigation evaluates the benefits of the proposed methods and the influence of the recognized change patterns to select the strategies for mapping adaptation. The summary of the findings is as follows: (1) the Precision (>60%) and Recall (>35%) achieved by comparing manually identified change patterns with the automatic ones; (2) a set of potential impact of recognized change patterns on the way mappings is adapted. We found that the detected correlations cover ∼66% of the mapping adaptation actions with a positive impact; and (3) the influence of the similarity coefficient calculated between concept attributes on the performance of the recognition algorithms. The experimental evaluations conducted with real life science ontologies showed the effectiveness of our approach to accurately characterize ontology evolution at the level of concept attributes. This investigation confirmed the relevance of the proposed change patterns to support decisions on mapping adaptation. Copyright © 2014 Elsevier B.V. All rights reserved.

Quantitative validation of sensory mapping in persistent postherniorrhaphy inguinal pain patients undergoing triple neurectomy.

PubMed

Bjurström, M F; Álvarez, R; Nicol, A L; Olmstead, R; Amid, P K; Chen, D C

2017-04-01

Neurectomy of the inguinal nerves may be considered for selected refractory cases of chronic postherniorrhaphy inguinal pain (CPIP). There is to date a paucity of easily applicable clinical tools to identify neuropathic pain and examine the neurosensory effects of remedial surgery. The present quantitative sensory testing (QST) pilot study evaluates a sensory mapping technique. Longitudinal (preoperative, immediate postoperative, and late postoperative) dermatomal sensory mapping and a comprehensive QST protocol were conducted in CPIP patients with unilateral, predominantly neuropathic inguinodynia presenting for triple neurectomy (n = 13). QST was conducted in four areas on the affected, painful side and in one contralateral comparison site. QST variables were compared according to sensory mapping outcomes: (o)/normal sensation, (+)/pain, and (-)/numbness. Diagnostic ability of the sensory mapping outcomes to detect QST-assessed allodynia or hypoesthesia was estimated through calculation of specificity and sensitivity values. Preoperatively, patients exhibited mechanical hypoesthesia and allodynia and pressure allodynia and hyperalgesia in painful areas mapped (+) (p < .05); sensory mapping outcome (+) demonstrated high ability to detect mechanical allodynia [sensitivity 0.74 (95% CI 0.61-0.86), specificity 0.94 (0.84-1.00)] and pressure allodynia [sensitivity 0.96 (0.89-1.00), specificity 1.00 (1.00-1.00)], but not thermal allodynia. Postoperatively, mapped areas of numbness (-) were associated with mechanical and thermal hypoesthesia (p < .05); (-) showed high sensitivity and specificity to detect mechanical and cold hypoesthesia. Sensory mapping provides an accurate clinical neuropathic assessment with strong correlation to QST findings of preoperative mechanical and pressure allodynia, and postoperative mechanical and thermal hypoesthesia in CPIP patients undergoing neurectomy.

Mapping of Ppd-B1, a Major Candidate Gene for Late Heading on Wild Emmer Chromosome Arm 2BS and Assessment of Its Interactions with Early Heading QTLs on 3AL.

PubMed

Zhou, Wei; Wu, Shasha; Ding, Mingquan; Li, Jingjuan; Shi, Zhaobin; Wei, Wei; Guo, Jialian; Zhang, Hua; Jiang, Yurong; Rong, Junkang

2016-01-01

Wheat heading date is an important agronomic trait determining maturation time and yield. A set of common wheat (Triticum aestivum var. Chinese Spring; CS)-wild emmer (T. turgidum L. subsp. dicoccoides (TDIC)) chromosome arm substitution lines (CASLs) was used to identify and allocate QTLs conferring late or early spike emergence by examining heading date. Genetic loci accelerating heading were found on TDIC chromosome arms 3AL and 7BS, while loci delaying heading were located on 4AL and 2BS. To map QTLs conferring late heading on 2BS, F2 populations derived from two cross combinations of CASL2BS × CS and CASL3AL × CASL2BS were developed and each planted at two times, constituting four F2 mapping populations. Heading date varied continuously among individuals of these four populations, suggesting quantitative characteristics. A genetic map of 2BS, consisting of 23 SSR and one single-stranded conformation polymorphism (SSCP) marker(s), was constructed using these F2 populations. This map spanned a genetic length of 53.2 cM with average marker density of 2.3 cM. The photoperiod-sensitivity gene Ppd-B1 was mapped to chromosome arm 2BS as a SSCP molecular marker, and was validated as tightly linked to a major QTL governing late heading of CASL2BS in all mapping populations. A significant dominance by additive effect of Ppd-B1 with the LUX gene located on 3AL was also detected. CS had more copies of Ppd-B1 than CASL2BS, implying that increased copy number could elevate the expression of Ppd-1 in CS, also increasing expression of LUX and FT genes and causing CS to have an earlier heading date than CASL2BS in long days.

Mapping of Ppd-B1, a Major Candidate Gene for Late Heading on Wild Emmer Chromosome Arm 2BS and Assessment of Its Interactions with Early Heading QTLs on 3AL

PubMed Central

Ding, Mingquan; Li, Jingjuan; Shi, Zhaobin; Wei, Wei; Guo, Jialian; Zhang, Hua; Jiang, Yurong; Rong, Junkang

2016-01-01

Wheat heading date is an important agronomic trait determining maturation time and yield. A set of common wheat (Triticum aestivum var. Chinese Spring; CS)-wild emmer (T. turgidum L. subsp. dicoccoides (TDIC)) chromosome arm substitution lines (CASLs) was used to identify and allocate QTLs conferring late or early spike emergence by examining heading date. Genetic loci accelerating heading were found on TDIC chromosome arms 3AL and 7BS, while loci delaying heading were located on 4AL and 2BS. To map QTLs conferring late heading on 2BS, F2 populations derived from two cross combinations of CASL2BS × CS and CASL3AL × CASL2BS were developed and each planted at two times, constituting four F2 mapping populations. Heading date varied continuously among individuals of these four populations, suggesting quantitative characteristics. A genetic map of 2BS, consisting of 23 SSR and one single-stranded conformation polymorphism (SSCP) marker(s), was constructed using these F2 populations. This map spanned a genetic length of 53.2 cM with average marker density of 2.3 cM. The photoperiod-sensitivity gene Ppd-B1 was mapped to chromosome arm 2BS as a SSCP molecular marker, and was validated as tightly linked to a major QTL governing late heading of CASL2BS in all mapping populations. A significant dominance by additive effect of Ppd-B1 with the LUX gene located on 3AL was also detected. CS had more copies of Ppd-B1 than CASL2BS, implying that increased copy number could elevate the expression of Ppd-1 in CS, also increasing expression of LUX and FT genes and causing CS to have an earlier heading date than CASL2BS in long days. PMID:26848576

1. Photocopy of map (from The Virginia Springs, and the ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. Photocopy of map (from The Virginia Springs, and the Springs of the South and West by Moorman) No date 'MAP OF ROUTES AND DISTANCES TO THE VIRGINIA SPRINGS' - White Sulphur Springs, U.S. Route 60, White Sulphur Springs, Greenbrier County, WV

75 FR 10552 - Sixth Meeting-RTCA Special Committee 217: Joint With EUROCAE WG-44 Terrain and Airport Mapping...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-03-08

... 217: Joint With EUROCAE WG- 44 Terrain and Airport Mapping Databases AGENCY: Federal Aviation... Airport Mapping Databases. SUMMARY: The FAA is issuing this notice to advise the public of a meeting of RTCA Special Committee 217: Joint with EUROCAE WG-44 Terrain and Airport Mapping Databases. DATES: The...

76 FR 27744 - Eighth Meeting-RTCA Special Committee 217: Joint With EUROCAE WG-44 Terrain and Airport Mapping...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-12

... Committee 217: Joint With EUROCAE WG-44 Terrain and Airport Mapping Databases AGENCY: Federal Aviation... Airport Mapping Databases. SUMMARY: The FAA is issuing this notice to advise the public of a meeting of RTCA Special Committee 217: Joint with EUROCAE WG-44 Terrain and Airport Mapping Databases. DATES: The...

76 FR 54527 - Ninth Meeting-RTCA Special Committee 217: Joint With EUROCAE WG-44 Terrain and Airport Mapping...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-09-01

... 217: Joint With EUROCAE WG- 44 Terrain and Airport Mapping Databases AGENCY: Federal Aviation... Airport Mapping Databases. SUMMARY: The FAA is issuing this notice to advise the public of a meeting of RTCA Special Committee 217: Joint with EUROCAE WG-44 Terrain and Airport Mapping Databases. DATES: The...

77 FR 47492 - Thirteenth Meeting: RTCA Special Committee 217, Terrain and Airport Mapping Databases, Joint With...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-08

... Committee 217, Terrain and Airport Mapping Databases, Joint With EUROCAE WG-44 AGENCY: Federal Aviation... 217, Terrain and Airport Mapping Databases, Joint with EUROCAE WG-44. SUMMARY: The FAA is issuing this... Mapping Databases, Joint with EUROCAE WG-44. DATES: The meeting will be held September 10-14, 2012, from 9...

76 FR 6179 - Eighth Meeting-RTCA Special Committee 217: Joint With EUROCAE WG-44 Terrain and Airport Mapping...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-02-03

... Committee 217: Joint With EUROCAE WG-44 Terrain and Airport Mapping Databases AGENCY: Federal Aviation... Airport Mapping Databases. SUMMARY: The FAA is issuing this notice to advise the public of a meeting of RTCA Special Committee 217: Joint with EUROCAE WG-44 Terrain and Airport Mapping Databases. DATES: The...

Phenology-based Spartina alterniflora mapping in coastal wetland of the Yangtze Estuary using time series of GaoFen satellite no. 1 wide field of view imagery

NASA Astrophysics Data System (ADS)

Ai, Jinquan; Gao, Wei; Gao, Zhiqiang; Shi, Runhe; Zhang, Chao

2017-04-01

Spartina alterniflora is an aggressive invasive plant species that replaces native species, changes the structure and function of the ecosystem across coastal wetlands in China, and is thus a major conservation concern. Mapping the spread of its invasion is a necessary first step for the implementation of effective ecological management strategies. The performance of a phenology-based approach for S. alterniflora mapping is explored in the coastal wetland of the Yangtze Estuary using a time series of GaoFen satellite no. 1 wide field of view camera (GF-1 WFV) imagery. First, a time series of the normalized difference vegetation index (NDVI) was constructed to evaluate the phenology of S. alterniflora. Two phenological stages (the senescence stage from November to mid-December and the green-up stage from late April to May) were determined as important for S. alterniflora detection in the study area based on NDVI temporal profiles, spectral reflectance curves of S. alterniflora and its coexistent species, and field surveys. Three phenology feature sets representing three major phenology-based detection strategies were then compared to map S. alterniflora: (1) the single-date imagery acquired within the optimal phenological window, (2) the multitemporal imagery, including four images from the two important phenological windows, and (3) the monthly NDVI time series imagery. Support vector machines and maximum likelihood classifiers were applied on each phenology feature set at different training sample sizes. For all phenology feature sets, the overall results were produced consistently with high mapping accuracies under sufficient training samples sizes, although significantly improved classification accuracies (10%) were obtained when the monthly NDVI time series imagery was employed. The optimal single-date imagery had the lowest accuracies of all detection strategies. The multitemporal analysis demonstrated little reduction in the overall accuracy compared with the use of monthly NDVI time series imagery. These results show the importance of considering the phenological stage for image selection for mapping S. alterniflora using GF-1 WFV imagery. Furthermore, in light of the better tradeoff between the number of images and classification accuracy when using multitemporal GF-1 WFV imagery, we suggest using multitemporal imagery acquired at appropriate phenological windows for S. alterniflora mapping at regional scales.

Autosomal dominant spastic paraplegia with peripheral neuropathy maps to chr12q23-24.

PubMed

Schüle, R; Bonin, M; Dürr, A; Forlani, S; Sperfeld, A D; Klimpe, S; Mueller, J C; Seibel, A; van de Warrenburg, B P; Bauer, P; Schöls, L

2009-06-02

Hereditary spastic paraplegias (HSP) are genetically exceedingly heterogeneous. To date, 37 genetic loci for HSP have been described (SPG1-41), among them 16 loci for autosomal dominant disease. Notwithstanding, further genetic heterogeneity is to be expected in HSP, as various HSP families do not link to any of the known HSP loci. In this study, we aimed to map the disease locus in a German family segregating autosomal dominant complicated HSP. A genome-wide linkage analysis was performed using the GeneChip Mapping 10Kv2.0 Xba Array containing 10,204 SNP markers. Suggestive loci were further analyzed by mapping of microsatellite markers. One locus on chromosome 12q23-24, termed SPG36, was confirmed by high density microsatellite fine mapping with a significant LOD score of 3.2. SPG36 is flanked by markers D12S318 and D12S79. Linkage to SPG36 was excluded in >20 additional autosomal dominant HSP families. Candidate genes were selected and sequenced. No disease-causing mutations were identified in the coding regions of ATXN2, HSPB8, IFT81, Myo1H, UBE3B, and VPS29. SPG36 is complicated by a sensory and motor neuropathy; it is therefore the eighth autosomal dominant subtype of complicated HSP. We report mapping of a new locus for autosomal dominant hereditary spastic paraplegia (HSP) (SPG36) on chromosome 12q23-24 in a German family with autosomal dominant HSP complicated by peripheral neuropathy.

Methods for estimating magnitude and frequency of floods in Arizona, developed with unregulated and rural peak-flow data through water year 2010

USGS Publications Warehouse

Paretti, Nicholas V.; Kennedy, Jeffrey R.; Turney, Lovina A.; Veilleux, Andrea G.

2014-01-01

The regional regression equations were integrated into the U.S. Geological Survey’s StreamStats program. The StreamStats program is a national map-based web application that allows the public to easily access published flood frequency and basin characteristic statistics. The interactive web application allows a user to select a point within a watershed (gaged or ungaged) and retrieve flood-frequency estimates derived from the current regional regression equations and geographic information system data within the selected basin. StreamStats provides users with an efficient and accurate means for retrieving the most up to date flood frequency and basin characteristic data. StreamStats is intended to provide consistent statistics, minimize user error, and reduce the need for large datasets and costly geographic information system software.

Localization of canine brachycephaly using an across breed mapping approach.

PubMed

Bannasch, Danika; Young, Amy; Myers, Jeffrey; Truvé, Katarina; Dickinson, Peter; Gregg, Jeffrey; Davis, Ryan; Bongcam-Rudloff, Eric; Webster, Matthew T; Lindblad-Toh, Kerstin; Pedersen, Niels

2010-03-10

The domestic dog, Canis familiaris, exhibits profound phenotypic diversity and is an ideal model organism for the genetic dissection of simple and complex traits. However, some of the most interesting phenotypes are fixed in particular breeds and are therefore less tractable to genetic analysis using classical segregation-based mapping approaches. We implemented an across breed mapping approach using a moderately dense SNP array, a low number of animals and breeds carefully selected for the phenotypes of interest to identify genetic variants responsible for breed-defining characteristics. Using a modest number of affected (10-30) and control (20-60) samples from multiple breeds, the correct chromosomal assignment was identified in a proof of concept experiment using three previously defined loci; hyperuricosuria, white spotting and chondrodysplasia. Genome-wide association was performed in a similar manner for one of the most striking morphological traits in dogs: brachycephalic head type. Although candidate gene approaches based on comparable phenotypes in mice and humans have been utilized for this trait, the causative gene has remained elusive using this method. Samples from nine affected breeds and thirteen control breeds identified strong genome-wide associations for brachycephalic head type on Cfa 1. Two independent datasets identified the same genomic region. Levels of relative heterozygosity in the associated region indicate that it has been subjected to a selective sweep, consistent with it being a breed defining morphological characteristic. Genotyping additional dogs in the region confirmed the association. To date, the genetic structure of dog breeds has primarily been exploited for genome wide association for segregating traits. These results demonstrate that non-segregating traits under strong selection are equally tractable to genetic analysis using small sample numbers.

The VIMS Data Explorer: A tool for locating and visualizing hyperspectral data

NASA Astrophysics Data System (ADS)

Pasek, V. D.; Lytle, D. M.; Brown, R. H.

2016-12-01

Since successfully entering Saturn's orbit during Summer 2004 there have been over 300,000 hyperspectral data cubes returned from the visible and infrared mapping spectrometer (VIMS) instrument onboard the Cassini spacecraft. The VIMS Science Investigation is a multidisciplinary effort that uses these hyperspectral data to study a variety of scientific problems, including surface characterizations of the icy satellites and atmospheric analyses of Titan and Saturn. Such investigations may need to identify thousands of exemplary data cubes for analysis and can span many years in scope. Here we describe the VIMS data explorer (VDE) application, currently employed by the VIMS Investigation to search for and visualize data. The VDE application facilitates real-time inspection of the entire VIMS hyperspectral dataset, the construction of in situ maps, and markers to save and recall work. The application relies on two databases to provide comprehensive search capabilities. The first database contains metadata for every cube. These metadata searches are used to identify records based on parameters such as target, observation name, or date taken; they fall short in utility for some investigations. The cube metadata contains no target geometry information. Through the introduction of a post-calibration pixel database, the VDE tool enables users to greatly expand their searching capabilities. Users can select favorable cubes for further processing into 2-D and 3-D interactive maps, aiding in the data interpretation and selection process. The VDE application enables efficient search, visualization, and access to VIMS hyperspectral data. It is simple to use, requiring nothing more than a browser for access. Hyperspectral bands can be individually selected or combined to create real-time color images, a technique commonly employed by hyperspectral researchers to highlight compositional differences.

Genome-wide mapping reveals single-origin chromosome replication in Leishmania, a eukaryotic microbe.

PubMed

Marques, Catarina A; Dickens, Nicholas J; Paape, Daniel; Campbell, Samantha J; McCulloch, Richard

2015-10-19

DNA replication initiates on defined genome sites, termed origins. Origin usage appears to follow common rules in the eukaryotic organisms examined to date: all chromosomes are replicated from multiple origins, which display variations in firing efficiency and are selected from a larger pool of potential origins. To ask if these features of DNA replication are true of all eukaryotes, we describe genome-wide origin mapping in the parasite Leishmania. Origin mapping in Leishmania suggests a striking divergence in origin usage relative to characterized eukaryotes, since each chromosome appears to be replicated from a single origin. By comparing two species of Leishmania, we find evidence that such origin singularity is maintained in the face of chromosome fusion or fission events during evolution. Mapping Leishmania origins suggests that all origins fire with equal efficiency, and that the genomic sites occupied by origins differ from related non-origins sites. Finally, we provide evidence that origin location in Leishmania displays striking conservation with Trypanosoma brucei, despite the latter parasite replicating its chromosomes from multiple, variable strength origins. The demonstration of chromosome replication for a single origin in Leishmania, a microbial eukaryote, has implications for the evolution of origin multiplicity and associated controls, and may explain the pervasive aneuploidy that characterizes Leishmania chromosome architecture.

Global survey of genomic imprinting by transcriptome sequencing.

PubMed

Babak, Tomas; Deveale, Brian; Armour, Christopher; Raymond, Christopher; Cleary, Michele A; van der Kooy, Derek; Johnson, Jason M; Lim, Lee P

2008-11-25

Genomic imprinting restricts gene expression to a paternal or maternal allele. To date, approximately 90 imprinted transcripts have been identified in mouse, of which the majority were detected after intense interrogation of clusters of imprinted genes identified by phenotype-driven assays in mice with uniparental disomies [1]. Here we use selective priming and parallel sequencing to measure allelic bias in whole transcriptomes. By distinguishing parent-of-origin bias from strain-specific bias in embryos derived from a reciprocal cross of mice, we constructed a genome-wide map of imprinted transcription. This map was able to objectively locate over 80% of known imprinted loci and allowed the detection and confirmation of six novel imprinted genes. Even in the intensely studied embryonic day 9.5 developmental stage that we analyzed, more than half of all imprinted single-nucleotide polymorphisms did not overlap previously discovered imprinted transcripts; a large fraction of these represent novel noncoding RNAs within known imprinted loci. For example, a previously unnoticed, maternally expressed antisense transcript was mapped within the Grb10 locus. This study demonstrates the feasibility of using transcriptome sequencing for mapping of imprinted gene expression in physiologically normal animals. Such an approach will allow researchers to study imprinting without restricting themselves to individual loci or specific transcripts.

LANDSAT landcover information applied to regional planning decisions. [Prince Edward County, Virginia

NASA Technical Reports Server (NTRS)

Dixon, C. M.

1981-01-01

Land cover information derived from LANDSAT is being utilized by Piedmont Planning District Commission located in the State of Virginia. Progress to date is reported on a level one land cover classification map being produced with nine categories. The nine categories of classification are defined. The computer compatible tape selection is presented. Two unsupervised classifications were done, with 50 and 70 classes respectively. Twenty-eight spectral classes were developed using the supervised technique, employing actual ground truth training sites. The accuracy of the unsupervised classifications are estimated through comparison with local county statistics and with an actual pixel count of LANDSAT information compared to ground truth.

Change in First Leaf Date Between 1951-1960 and 2006-2015

EPA Pesticide Factsheets

This figure shows modeled trends in lilac and honeysuckle first leaf dates at weather stations across the contiguous 48 states. This map compares the average first leaf date during two 10-year periods, developed using data from the USA National Phenology Network. Blue circles represent later leaf dates, and red circles represent earlier. For more information: www.epa.gov/climatechange/science/indicators

In Silico Identification of Epitopes in Mycobacterium avium subsp. paratuberculosis Proteins That Were Upregulated under Stress Conditions

PubMed Central

Gurung, Ratna B.; Purdie, Auriol C.; Begg, Douglas J.

2012-01-01

Johne's disease in ruminants is caused by Mycobacterium avium subsp. paratuberculosis. Diagnosis of M. avium subsp. paratuberculosis infection is difficult, especially in the early stages. To date, ideal antigen candidates are not available for efficient immunization or immunodiagnosis. This study reports the in silico selection and subsequent analysis of epitopes of M. avium subsp. paratuberculosis proteins that were found to be upregulated under stress conditions as a means to identify immunogenic candidate proteins. Previous studies have reported differential regulation of proteins when M. avium subsp. paratuberculosis is exposed to stressors which induce a response similar to dormancy. Dormancy may be involved in evading host defense mechanisms, and the host may also mount an immune response against these proteins. Twenty-five M. avium subsp. paratuberculosis proteins that were previously identified as being upregulated under in vitro stress conditions were analyzed for B and T cell epitopes by use of the prediction tools at the Immune Epitope Database and Analysis Resource. Major histocompatibility complex class I T cell epitopes were predicted using an artificial neural network method, and class II T cell epitopes were predicted using the consensus method. Conformational B cell epitopes were predicted from the relevant three-dimensional structure template for each protein. Based on the greatest number of predicted epitopes, eight proteins (MAP2698c [encoded by desA2], MAP2312c [encoded by fadE19], MAP3651c [encoded by fadE3_2], MAP2872c [encoded by fabG5_2], MAP3523c [encoded by oxcA], MAP0187c [encoded by sodA], and the hypothetical proteins MAP3567 and MAP1168c) were identified as potential candidates for study of antibody- and cell-mediated immune responses within infected hosts. PMID:22496492

An offline-online Web-GIS Android application for fast data acquisition of landslide hazard and risk

NASA Astrophysics Data System (ADS)

Olyazadeh, Roya; Sudmeier-Rieux, Karen; Jaboyedoff, Michel; Derron, Marc-Henri; Devkota, Sanjaya

2017-04-01

Regional landslide assessments and mapping have been effectively pursued by research institutions, national and local governments, non-governmental organizations (NGOs), and different stakeholders for some time, and a wide range of methodologies and technologies have consequently been proposed. Land-use mapping and hazard event inventories are mostly created by remote-sensing data, subject to difficulties, such as accessibility and terrain, which need to be overcome. Likewise, landslide data acquisition for the field navigation can magnify the accuracy of databases and analysis. Open-source Web and mobile GIS tools can be used for improved ground-truthing of critical areas to improve the analysis of hazard patterns and triggering factors. This paper reviews the implementation and selected results of a secure mobile-map application called ROOMA (Rapid Offline-Online Mapping Application) for the rapid data collection of landslide hazard and risk. This prototype assists the quick creation of landslide inventory maps (LIMs) by collecting information on the type, feature, volume, date, and patterns of landslides using open-source Web-GIS technologies such as Leaflet maps, Cordova, GeoServer, PostgreSQL as the real DBMS (database management system), and PostGIS as its plug-in for spatial database management. This application comprises Leaflet maps coupled with satellite images as a base layer, drawing tools, geolocation (using GPS and the Internet), photo mapping, and event clustering. All the features and information are recorded into a GeoJSON text file in an offline version (Android) and subsequently uploaded to the online mode (using all browsers) with the availability of Internet. Finally, the events can be accessed and edited after approval by an administrator and then be visualized by the general public.

Quaternary geologic map of the north-central part of the Salinas River Valley and Arroyo Seco, Monterey County, California

USGS Publications Warehouse

Taylor, Emily M.; Sweetkind, Donald S.

2014-01-01

Arroyo Seco, a perennial drainage in the central Coast Range of California, records a sequence of strath terraces. These terraces preserve an erosional and depositional history, controlled by both climate change and regional tectonics. These deposits have been mapped and correlated on the basis of field investigations, digital terrain analysis, stream gradient profiles, evaluation of published regional soil maps, and satellite imagery. Seven of the strath terraces and associated alluvial fans have been dated by optically stimulated luminescence (OSL) or infrared stimulated luminescence (IRSL). The OSL and IRSL dates on seven of the strath terraces and associated alluvial fans in Arroyo Seco are approximately >120 ka, >65 ka, 51–46 ka, 36–35 ka, 9 ka, and 2–1 ka. These dates generally fall within the range of ages reported from many well-dated marine terraces on the California coast that are formed during sea-level high stands. Tectonic movements, consistently upward, result in a constantly and slowly emerging coastline, however, the regional effects of climate change and resulting eustatic sea-level rises are interpreted as the driving mechanism for erosion and aggradation in Arroyo Seco.

Interactive 3D Mars Visualization

NASA Technical Reports Server (NTRS)

Powell, Mark W.

2012-01-01

The Interactive 3D Mars Visualization system provides high-performance, immersive visualization of satellite and surface vehicle imagery of Mars. The software can be used in mission operations to provide the most accurate position information for the Mars rovers to date. When integrated into the mission data pipeline, this system allows mission planners to view the location of the rover on Mars to 0.01-meter accuracy with respect to satellite imagery, with dynamic updates to incorporate the latest position information. Given this information so early in the planning process, rover drivers are able to plan more accurate drive activities for the rover than ever before, increasing the execution of science activities significantly. Scientifically, this 3D mapping information puts all of the science analyses to date into geologic context on a daily basis instead of weeks or months, as was the norm prior to this contribution. This allows the science planners to judge the efficacy of their previously executed science observations much more efficiently, and achieve greater science return as a result. The Interactive 3D Mars surface view is a Mars terrain browsing software interface that encompasses the entire region of exploration for a Mars surface exploration mission. The view is interactive, allowing the user to pan in any direction by clicking and dragging, or to zoom in or out by scrolling the mouse or touchpad. This set currently includes tools for selecting a point of interest, and a ruler tool for displaying the distance between and positions of two points of interest. The mapping information can be harvested and shared through ubiquitous online mapping tools like Google Mars, NASA WorldWind, and Worldwide Telescope.

Microprobe monazite geochronology: new techniques for dating deformation and metamorphism

NASA Astrophysics Data System (ADS)

Williams, M.; Jercinovic, M.; Goncalves, P.; Mahan, K.

2003-04-01

High-resolution compositional mapping, age mapping, and precise dating of monazite on the electron microprobe are powerful additions to microstructural and petrologic analysis and important tools for tectonic studies. The in-situ nature and high spatial resolution of the technique offer an entirely new level of structurally and texturally specific geochronologic data that can be used to put absolute time constraints on P-T-D paths, constrain the rates of sedimentary, metamorphic, and deformational processes, and provide new links between metamorphism and deformation. New analytical techniques (including background modeling, sample preparation, and interference analysis) have significantly improved the precision and accuracy of the technique and new mapping and image analysis techniques have increased the efficiency and strengthened the correlation with fabrics and textures. Microprobe geochronology is particularly applicable to three persistent microstructural-microtextural problem areas: (1) constraining the chronology of metamorphic assemblages; (2) constraining the timing of deformational fabrics; and (3) interpreting other geochronological results. In addition, authigenic monazite can be used to date sedimentary basins, and detrital monazite can fingerprint sedimentary source areas, both critical for tectonic analysis. Although some monazite generations can be directly tied to metamorphism or deformation, at present, the most common constraints rely on monazite inclusion relations in porphyroblasts that, in turn, can be tied to the deformation and/or metamorphic history. Examples will be presented from deep-crustal rocks of northern Saskatchewan and from mid-crustal rocks from the southwestern USA. Microprobe monazite geochronology has been used in both regions to deconvolute overprinting deformation and metamorphic events and to clarify the interpretation of other geochronologic data. Microprobe mapping and dating are powerful companions to mass spectroscopic dating techniques. They allow geochronology to be incorporated into the microstructural analytical process, resulting in a new level of integration of time (t) into P-T-D histories.

Evaluating Gridded Spring Indices Using the USA National Phenology Network's Observational Phenology Data

NASA Astrophysics Data System (ADS)

Crimmins, T. M.; Gerst, K.

2017-12-01

The USA National Phenology Network (USA-NPN; www.usanpn.org) produces and freely delivers daily and short-term forecast maps of spring onset dates at fine spatial scale for the conterminous United States and Alaska using the Spring Indices. These models, which represent the start of biological activity in the spring season, were developed using a long-term observational record of four species of lilacs and honeysuckles contributed by volunteer observers. Three of the four species continue to be tracked through the USA-NPN's phenology observation program, Nature's Notebook. The gridded Spring Index maps have utility for a wide range of natural resource planning and management applications, including scheduling invasive species and pest detection and control activities, anticipating allergy outbreaks and planning agricultural harvest dates. However, to date, there has not been a comprehensive assessment of how well the gridded Spring Index maps accurately reflect phenological activity in lilacs and honeysuckles or other species of plants. In this study, we used observational plant phenology data maintained by the USA-NPN to evaluate how well the gridded Spring Index maps match leaf and flowering onset dates in a) the lilac and honeysuckle species used to construct the models and b) in several species of deciduous trees. The Spring Index performed strongly at predicting the timing of leaf-out and flowering in lilacs and honeysuckles. The average error between predicted and observed date of onset ranged from 5.9 to 11.4 days. Flowering models performed slightly better than leaf-out models. The degree to which the Spring Indices predicted native deciduous tree leaf and flower phenology varied by year, species, and region. Generally, the models were better predictors of leaf and flowering onset dates in the Northeastern and Midwestern US. These results reveal when and where the Spring Indices are a meaningful proxy of phenological activity across the United States.

Multipurpose bedrock surficial, and environmental geologic maps, New River valley, southwest Virginia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schultz, A.; Collins, T.

1994-03-01

Multipurpose bedrock, surficial, and environmental geologic maps have recently been completed for portions of the Valley and Ridge province of southwest VA. The maps, at both 1:100,000 and 1:24,000 scales, show generalized and detailed bedrock geology grouped by lithology and environmental hazard associations. Also shown are a variety of alluvial, colluvial, debris flow, and landslide deposits, as well as karst features. Multidisciplinary research topics addressed during the mapping included slope evolution and geomorphology, drainage history and terrace distribution, ancient large-scale landsliding, and sinkhole development. The maps have been used by land-use planners and engineering firms in an evaluation of Appalachianmore » paleoseismicity and to assess potential groundwater contamination and subsidence in karst areas. The maps are being used for environmental hazard assessment and site selection of a proposed large electric powerline that crosses the Jefferson National Forest. Also, the maps are proving useful in planning for a public access interpretive geologic enter focused on large-scale slope failures. Some of the largest known landslides in eastern North America took place within the map area. Field comparisons and detailed structure mapping of similar features along the Front Range of the Colorado Rockies indicate that the landslides were probably emplaced during a single catastrophic event of short duration. Although the giles County seismic zone is nearby, stability analyses of slopes in the map area have shown that failure need not have been initiated by a seismic event. Several distinct colluvial units mapped within the area of landslides document a period of extensive weathering that postdates slide emplacement. Radiocarbon dates from landslide sag ponds indicate a minimum age of 9,860 B.P. for emplacement of some of the landslides. These results indicate that pre-slide colluvial and debris flow deposits are at least Pleistocene in age.« less

Sub-millimetre properties of massive star-forming galaxies at z ~ 2 in SHADES/SXDF

NASA Astrophysics Data System (ADS)

Takagi, T.; Mortier, A. M. J.; Shimasaku, K.; Coppin, K.; Pope, A.; Ivison, R. J.; Hanami, H.; Serjeant, S.; Dunlop, J. S.

2007-05-01

We study the submillimetre (submm) properties of the following NIR-selected massive galaxies at high redshifts: BzK-selected star-forming galaxies (BzKs), distant red galaxies (DRGs) and extremely red objects (EROs). We used the SCUBA HAlf Degree Extragalactic Survey (SHADES), the largest uniform submm survey to date. We detected 6 NIR-selected galaxies in our SCUBA map. Four submm-detected galaxies out of six are found to be detected both at 24 micron and in radio (1.4 GHz), and therefore confirmed as genuine submm-bright galaxies. We identify two submm-bright NIR-selected galaxies are the BzK-DRG-ERO overlapping population. Although this overlapping population is rare, about 12% of this population could be submm galaxies. With a stacking analysis, we detected the 850-micron flux of submm-faint BzKs and EROs in our SCUBA maps. While the contribution from BzKs at z˜2 to submm background is about 10 - 15 % and similar to that from EROs typically at z˜1, BzKs have a higher fraction (˜30%) of flux in resolved sources than EROs do. Therefore, submm flux of BzKs seems to be biased high. From the SED fitting using an evolutionary model of starbursts with radiative transfer, submm-bright NIR-selected galaxies, mostly BzKs, are found to have the stellar mass of >5x1010M[sun] with the bolometric luminosity of >3x1012L[sun]. On the other hand, an average SED of submm-faint BzKs indicates the typical stellar mass of <6x1010M[sun] and therefore less massive.

Similar traits, different genes? Examining convergent evolution in related weedy rice populations.

PubMed

Thurber, Carrie S; Jia, Melissa H; Jia, Yulin; Caicedo, Ana L

2013-02-01

Convergent phenotypic evolution may or may not be associated with convergent genotypic evolution. Agricultural weeds have repeatedly been selected for weed-adaptive traits such as rapid growth, increased seed dispersal and dormancy, thus providing an ideal system for the study of convergent evolution. Here, we identify QTL underlying weedy traits and compare their genetic architecture to assess the potential for convergent genetic evolution in two distinct populations of weedy rice. F(2) offspring from crosses between an indica cultivar and two individuals from genetically differentiated U.S. weedy rice populations were used to map QTL for four quantitative (heading date, seed shattering, plant height and growth rate) and two qualitative traits. We identified QTL on nine of the twelve rice chromosomes, yet most QTL locations do not overlap between the two populations. Shared QTL among weed groups were only seen for heading date, a trait for which weedy groups have diverged from their cultivated ancestors and from each other. Sharing of some QTL with wild rice also suggests a possible role in weed evolution for genes under selection during domestication. The lack of overlapping QTL for the remaining traits suggests that, despite a close evolutionary relationship, weedy rice groups have adapted to the same agricultural environment through different genetic mechanisms. © 2012 Blackwell Publishing Ltd.

78 FR 53712 - Surface Transportation Project Delivery Program Application Requirements

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-30

... the 21st Century Act (MAP-21), which converted the Surface Transportation Project Delivery Pilot... signed into law the Moving Ahead for Progress in the 21st Century Act (MAP-21), Public Law 112-141, 126... days from the date of MAP-21's enactment (October 1, 2012)--the regulations concerning the information...

44 CFR 65.17 - Review of determinations.

Code of Federal Regulations, 2010 CFR

2010-10-01

... determination; and (5) A copy of the effective NFIP map (Flood Hazard Boundary Map (FHBM) or Flood Insurance...) The name of the NFIP community in which the building or manufactured home is located; (ii) The... applies; (iii) The NFIP map panel number and effective date upon which the determination is based; (iv) A...

44 CFR 65.17 - Review of determinations.

Code of Federal Regulations, 2014 CFR

2014-10-01

... determination; and (5) A copy of the effective NFIP map (Flood Hazard Boundary Map (FHBM) or Flood Insurance...) The name of the NFIP community in which the building or manufactured home is located; (ii) The... applies; (iii) The NFIP map panel number and effective date upon which the determination is based; (iv) A...

44 CFR 65.17 - Review of determinations.

Code of Federal Regulations, 2012 CFR

2012-10-01

... determination; and (5) A copy of the effective NFIP map (Flood Hazard Boundary Map (FHBM) or Flood Insurance...) The name of the NFIP community in which the building or manufactured home is located; (ii) The... applies; (iii) The NFIP map panel number and effective date upon which the determination is based; (iv) A...

44 CFR 65.17 - Review of determinations.

Code of Federal Regulations, 2011 CFR

2011-10-01

... determination; and (5) A copy of the effective NFIP map (Flood Hazard Boundary Map (FHBM) or Flood Insurance...) The name of the NFIP community in which the building or manufactured home is located; (ii) The... applies; (iii) The NFIP map panel number and effective date upon which the determination is based; (iv) A...

44 CFR 65.17 - Review of determinations.

Code of Federal Regulations, 2013 CFR

2013-10-01

... determination; and (5) A copy of the effective NFIP map (Flood Hazard Boundary Map (FHBM) or Flood Insurance...) The name of the NFIP community in which the building or manufactured home is located; (ii) The... applies; (iii) The NFIP map panel number and effective date upon which the determination is based; (iv) A...

77 FR 14584 - Eleventh Meeting: RTCA Special Committee 217, Joint With EUROCAE Working Group-44, Terrain and...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-03-12

... Committee 217, Joint With EUROCAE Working Group--44, Terrain and Airport Mapping Databases AGENCY: Federal... Special Committee 217, Joint with EUROCAE Working Group--44, Terrain and Airport Mapping Databases... Committee 217, Joint with EUROCAE Working Group--44, Terrain and Airport Mapping Databases. DATES: The...

Practical use of medical terminology in curriculum mapping.

PubMed

Komenda, Martin; Schwarz, Daniel; Švancara, Jan; Vaitsis, Christos; Zary, Nabil; Dušek, Ladislav

2015-08-01

Various information systems for medical curriculum mapping and harmonization have been developed and successfully applied to date. However, the methods for exploiting the datasets captured inside the systems are rather lacking. We reviewed the existing medical terminologies, nomenclatures, coding and classification systems in order to select the most suitable one and apply it in delivering visual analytic tools and reports for the benefit of medical curriculum designers and innovators. A formal description of a particular curriculum of general medicine is based on 1347 learning units covering 7075 learning outcomes. Two data-analytical reports have been developed and discussed, showing how the curriculum is consistent with the MeSH thesaurus and how the MeSH thesaurus can be used to demonstrate interconnectivity of the curriculum through association analysis. Although the MeSH thesaurus is designed mainly to index medical literature and support searching through bibliographic databases, we have proved its use in medical curriculum mapping as being beneficial for curriculum designers and innovators. The presented approach can be followed wherever needed to identify all the mandatory components used for transparent and comprehensive overview of medical curriculum data. Copyright © 2015 Elsevier Ltd. All rights reserved.

Influence of Fault-Controlled Topography on Fluvio-Deltaic Sedimentary Systems in Eberswalde Crater, Mars

NASA Technical Reports Server (NTRS)

Rice, Melissa S.; Gupta, Sanjeev; Bell, James F., III; Warner, Nicholas H.

2011-01-01

Eberswalde crater was selected as a candidate landing site for the Mars Science Laboratory (MSL) mission based on the presence of a fan-shaped sedimentary deposit interpreted as a delta. We have identified and mapped five other candidate fluvio -deltaic systems in the crater, using images and digital terrain models (DTMs) derived from the Mars Reconnaissance Orbiter (MRO) High Resolution Imaging Science Experiment (HiRISE) and Context Camera (CTX). All of these systems consist of the same three stratigraphic units: (1) an upper layered unit, conformable with (2) a subpolygonally fractured unit, unconformably overlying (3) a pitted unit. We have also mapped a system of NNE-trending scarps interpreted as dip-slip faults that pre-date the fluvial -lacustrine deposits. The post-impact regional faulting may have generated the large-scale topography within the crater, which consists of a Western Basin, an Eastern Basin, and a central high. This topography subsequently provided depositional sinks for sediment entering the crater and controlled the geomorphic pattern of delta development.

Rice-Map: a new-generation rice genome browser.

PubMed

Wang, Jun; Kong, Lei; Zhao, Shuqi; Zhang, He; Tang, Liang; Li, Zhe; Gu, Xiaocheng; Luo, Jingchu; Gao, Ge

2011-03-30

The concurrent release of rice genome sequences for two subspecies (Oryza sativa L. ssp. japonica and Oryza sativa L. ssp. indica) facilitates rice studies at the whole genome level. Since the advent of high-throughput analysis, huge amounts of functional genomics data have been delivered rapidly, making an integrated online genome browser indispensable for scientists to visualize and analyze these data. Based on next-generation web technologies and high-throughput experimental data, we have developed Rice-Map, a novel genome browser for researchers to navigate, analyze and annotate rice genome interactively. More than one hundred annotation tracks (81 for japonica and 82 for indica) have been compiled and loaded into Rice-Map. These pre-computed annotations cover gene models, transcript evidences, expression profiling, epigenetic modifications, inter-species and intra-species homologies, genetic markers and other genomic features. In addition to these pre-computed tracks, registered users can interactively add comments and research notes to Rice-Map as User-Defined Annotation entries. By smoothly scrolling, dragging and zooming, users can browse various genomic features simultaneously at multiple scales. On-the-fly analysis for selected entries could be performed through dedicated bioinformatic analysis platforms such as WebLab and Galaxy. Furthermore, a BioMart-powered data warehouse "Rice Mart" is offered for advanced users to fetch bulk datasets based on complex criteria. Rice-Map delivers abundant up-to-date japonica and indica annotations, providing a valuable resource for both computational and bench biologists. Rice-Map is publicly accessible at http://www.ricemap.org/, with all data available for free downloading.

On Voxel based Iso-Tumor Control Probabilty and Iso-Complication Maps for Selective Boosting and Selective Avoidance Intensity Modulated Radiotherapy.

PubMed

Kim, Yusung; Tomé, Wolfgang A

2008-01-01

Voxel based iso-Tumor Control Probability (TCP) maps and iso-Complication maps are proposed as a plan-review tool especially for functional image-guided intensity-modulated radiotherapy (IMRT) strategies such as selective boosting (dose painting) and conformal avoidance IMRT. The maps employ voxel-based phenomenological biological dose-response models for target volumes and normal organs. Two IMRT strategies for prostate cancer, namely conventional uniform IMRT delivering an EUD = 84 Gy (equivalent uniform dose) to the entire PTV and selective boosting delivering an EUD = 82 Gy to the entire PTV, are investigated, to illustrate the advantages of this approach over iso-dose maps. Conventional uniform IMRT did yield a more uniform isodose map to the entire PTV while selective boosting did result in a nonuniform isodose map. However, when employing voxel based iso-TCP maps selective boosting exhibited a more uniform tumor control probability map compared to what could be achieved using conventional uniform IMRT, which showed TCP cold spots in high-risk tumor subvolumes despite delivering a higher EUD to the entire PTV. Voxel based iso-Complication maps are presented for rectum and bladder, and their utilization for selective avoidance IMRT strategies are discussed. We believe as the need for functional image guided treatment planning grows, voxel based iso-TCP and iso-Complication maps will become an important tool to assess the integrity of such treatment plans.

DotMapper: an open source tool for creating interactive disease point maps.

PubMed

Smith, Catherine M; Hayward, Andrew C

2016-04-12

Molecular strain typing of tuberculosis isolates has led to increased understanding of the epidemiological characteristics of the disease and improvements in its control, diagnosis and treatment. However, molecular cluster investigations, which aim to detect previously unidentified cases, remain challenging. Interactive dot mapping is a simple approach which could aid investigations by highlighting cases likely to share epidemiological links. Current tools generally require technical expertise or lack interactivity. We designed a flexible application for producing disease dot maps using Shiny, a web application framework for the statistical software, R. The application displays locations of cases on an interactive map colour coded according to levels of categorical variables such as demographics and risk factors. Cases can be filtered by selecting combinations of these characteristics and by notification date. It can be used to rapidly identify geographic patterns amongst cases in molecular clusters of tuberculosis in space and time; generate hypotheses about disease transmission; identify outliers, and guide targeted control measures. DotMapper is a user-friendly application which enables rapid production of maps displaying locations of cases and their epidemiological characteristics without the need for specialist training in geographic information systems. Enhanced understanding of tuberculosis transmission using this application could facilitate improved detection of cases with epidemiological links and therefore lessen the public health impacts of the disease. It is a flexible system and also has broad international potential application to other investigations using geo-coded health information.

Coconut, date and oil palm genomics

USDA-ARS?s Scientific Manuscript database

A review of genomics research is presented for the three most economically important palm crops, coconut (Cocos nucifera), date palm (Phoenix dactylifera) and oil palm (Elaeis guineensis), encompassing molecular markers studies of genetic diversity, genetic mapping, quantitative trait loci discovery...

Friction Mapping as a Tool for Measuring the Elastohydrodynamic Contact Running-in Process

DTIC Science & Technology

2015-10-01

ARL-TR-7501 ● OCT 2015 US Army Research Laboratory Friction Mapping as a Tool for Measuring the Elastohydrodynamic Contact...Research Laboratory Friction Mapping as a Tool for Measuring the Elastohydrodynamic Contact Running-in Process by Stephen Berkebile Vehicle...YYYY) October 2015 2. REPORT TYPE Final 3. DATES COVERED (From - To) 1 January–30 June 2015 4. TITLE AND SUBTITLE Friction Mapping as a Tool for

Planck 2013 results. XIII. Galactic CO emission

NASA Astrophysics Data System (ADS)

Planck Collaboration; Ade, P. A. R.; Aghanim, N.; Alves, M. I. R.; Armitage-Caplan, C.; Arnaud, M.; Ashdown, M.; Atrio-Barandela, F.; Aumont, J.; Baccigalupi, C.; Banday, A. J.; Barreiro, R. B.; Bartlett, J. G.; Battaner, E.; Benabed, K.; Benoît, A.; Benoit-Lévy, A.; Bernard, J.-P.; Bersanelli, M.; Bielewicz, P.; Bobin, J.; Bock, J. J.; Bonaldi, A.; Bond, J. R.; Borrill, J.; Bouchet, F. R.; Boulanger, F.; Bridges, M.; Bucher, M.; Burigana, C.; Butler, R. C.; Cardoso, J.-F.; Catalano, A.; Chamballu, A.; Chary, R.-R.; Chen, X.; Chiang, H. C.; Chiang, L.-Y.; Christensen, P. R.; Church, S.; Clements, D. L.; Colombi, S.; Colombo, L. P. L.; Combet, C.; Couchot, F.; Coulais, A.; Crill, B. P.; Curto, A.; Cuttaia, F.; Danese, L.; Davies, R. D.; de Bernardis, P.; de Rosa, A.; de Zotti, G.; Delabrouille, J.; Delouis, J.-M.; Dempsey, J. T.; Désert, F.-X.; Dickinson, C.; Diego, J. M.; Dole, H.; Donzelli, S.; Doré, O.; Douspis, M.; Dupac, X.; Efstathiou, G.; Enßlin, T. A.; Eriksen, H. K.; Falgarone, E.; Finelli, F.; Forni, O.; Frailis, M.; Franceschi, E.; Fukui, Y.; Galeotta, S.; Ganga, K.; Giard, M.; Giraud-Héraud, Y.; González-Nuevo, J.; Górski, K. M.; Gratton, S.; Gregorio, A.; Gruppuso, A.; Handa, T.; Hansen, F. K.; Hanson, D.; Harrison, D.; Henrot-Versillé, S.; Hernández-Monteagudo, C.; Herranz, D.; Hildebrandt, S. R.; Hily-Blant, P.; Hivon, E.; Hobson, M.; Holmes, W. A.; Hornstrup, A.; Hovest, W.; Huffenberger, K. M.; Hurier, G.; Jaffe, A. H.; Jaffe, T. R.; Jewell, J.; Jones, W. C.; Juvela, M.; Keihänen, E.; Keskitalo, R.; Kisner, T. S.; Knoche, J.; Knox, L.; Kunz, M.; Kurki-Suonio, H.; Lagache, G.; Lähteenmäki, A.; Lamarre, J.-M.; Lasenby, A.; Laureijs, R. J.; Lawrence, C. R.; Leonardi, R.; León-Tavares, J.; Lesgourgues, J.; Liguori, M.; Lilje, P. B.; Linden-Vørnle, M.; López-Caniego, M.; Lubin, P. M.; Macías-Pérez, J. F.; Maffei, B.; Mandolesi, N.; Maris, M.; Marshall, D. J.; Martin, P. G.; Martínez-González, E.; Masi, S.; Massardi, M.; Matarrese, S.; Matthai, F.; Mazzotta, P.; McGehee, P.; Melchiorri, A.; Mendes, L.; Mennella, A.; Migliaccio, M.; Mitra, S.; Miville-Deschênes, M.-A.; Moneti, A.; Montier, L.; Moore, T. J. T.; Morgante, G.; Morino, J.; Mortlock, D.; Munshi, D.; Murphy, J. A.; Nakajima, T.; Naselsky, P.; Nati, F.; Natoli, P.; Netterfield, C. B.; Nørgaard-Nielsen, H. U.; Noviello, F.; Novikov, D.; Novikov, I.; Okuda, T.; Osborne, S.; Oxborrow, C. A.; Paci, F.; Pagano, L.; Pajot, F.; Paladini, R.; Paoletti, D.; Pasian, F.; Patanchon, G.; Perdereau, O.; Perotto, L.; Perrotta, F.; Piacentini, F.; Piat, M.; Pierpaoli, E.; Pietrobon, D.; Plaszczynski, S.; Pointecouteau, E.; Polenta, G.; Ponthieu, N.; Popa, L.; Poutanen, T.; Pratt, G. W.; Prézeau, G.; Prunet, S.; Puget, J.-L.; Rachen, J. P.; Reach, W. T.; Rebolo, R.; Reinecke, M.; Remazeilles, M.; Renault, C.; Ricciardi, S.; Riller, T.; Ristorcelli, I.; Rocha, G.; Rosset, C.; Roudier, G.; Rowan-Robinson, M.; Rubiño-Martín, J. A.; Rusholme, B.; Sandri, M.; Santos, D.; Savini, G.; Scott, D.; Seiffert, M. D.; Shellard, E. P. S.; Spencer, L. D.; Starck, J.-L.; Stolyarov, V.; Stompor, R.; Sudiwala, R.; Sunyaev, R.; Sureau, F.; Sutton, D.; Suur-Uski, A.-S.; Sygnet, J.-F.; Tauber, J. A.; Tavagnacco, D.; Terenzi, L.; Thomas, H. S.; Toffolatti, L.; Tomasi, M.; Torii, K.; Tristram, M.; Tucci, M.; Tuovinen, J.; Umana, G.; Valenziano, L.; Valiviita, J.; Van Tent, B.; Vielva, P.; Villa, F.; Vittorio, N.; Wade, L. A.; Wandelt, B. D.; Wehus, I. K.; Yamamoto, H.; Yoda, T.; Yvon, D.; Zacchei, A.; Zonca, A.

2014-11-01

Rotational transition lines of CO play a major role in molecular radio astronomy as a mass tracer and in particular in the study of star formation and Galactic structure. Although a wealth of data exists for the Galactic plane and some well-known molecular clouds, there is no available high sensitivity all-sky survey of CO emission to date. Such all-sky surveys can be constructed using the Planck HFI data because the three lowest CO rotational transition lines at 115, 230 and 345 GHz significantly contribute to the signal of the 100, 217 and 353 GHz HFI channels, respectively. Two different component separation methods are used to extract the CO maps from Planck HFI data. The maps obtained are then compared to one another and to existing external CO surveys. From these quality checks the best CO maps, in terms of signal to noise ratio and/or residual contamination by other emission, are selected. Three different sets of velocity-integrated CO emission maps are produced with different trade-offs between signal-to-noise, angular resolution, and reliability. Maps for the CO J = 1 → 0, J = 2 → 1, and J = 3 → 2 rotational transitions are presented and described in detail. They are shown to be fully compatible with previous surveys of parts of the Galactic plane as well as with undersampled surveys of the high latitude sky. The Planck HFI velocity-integrated CO maps for the J = 1 → 0, J = 2 → 1, and J = 3 →2 rotational transitions provide an unprecedented all-sky CO view of the Galaxy. These maps are also of great interest to monitor potential CO contamination of the Planck studies of the cosmological microwave background.

Using stochastic gradient boosting to infer stopover habitat selection and distribution of Hooded Cranes Grus monacha during spring migration in Lindian, Northeast China.

PubMed

Cai, Tianlong; Huettmann, Falk; Guo, Yumin

2014-01-01

The Hooded Crane (Grus monacha) is a globally vulnerable species, and habitat loss is the primary cause of its decline. To date, little is known regarding the specific habitat needs, and stopover habitat selection in particular, of the Hooded Crane. In this study we used stochastic gradient boosting (TreeNet) to develop three specific habitat selection models for roosting, daytime resting, and feeding site selection. In addition, we used a geographic information system (GIS) combined with TreeNet to develop a species distribution model. We also generated a digital map of the relative occurrence index (ROI) of this species at daytime resting sites in the study area. Our study indicated that the water depth, distance to village, coverage of deciduous leaves, open water area, and density of plants were the major predictors of roosting site selection. For daytime resting site selection, the distance to wetland, distance to farmland, and distance to road were the primary predictors. For feeding site selection, the distance to road, quantity of food, plant coverage, distance to village, plant density, distance to wetland, and distance to river were contributing factors, and the distance to road and quantity of food were the most important predictors. The predictive map showed that there were two consistent multi-year daytime resting sites in our study area. Our field work in 2013 using systematic ground-truthing confirmed that this prediction was accurate. Based on this study, we suggest that Lindian plays an important role for migratory birds and that cultivation practices should be adjusted locally. Furthermore, public education programs to promote the concept of the harmonious coexistence of humans and cranes can help successfully protect this species in the long term and eventually lead to its delisting by the IUCN.

Using Stochastic Gradient Boosting to Infer Stopover Habitat Selection and Distribution of Hooded Cranes Grus monacha during Spring Migration in Lindian, Northeast China

PubMed Central

Cai, Tianlong; Huettmann, Falk; Guo, Yumin

2014-01-01

The Hooded Crane (Grus monacha) is a globally vulnerable species, and habitat loss is the primary cause of its decline. To date, little is known regarding the specific habitat needs, and stopover habitat selection in particular, of the Hooded Crane. In this study we used stochastic gradient boosting (TreeNet) to develop three specific habitat selection models for roosting, daytime resting, and feeding site selection. In addition, we used a geographic information system (GIS) combined with TreeNet to develop a species distribution model. We also generated a digital map of the relative occurrence index (ROI) of this species at daytime resting sites in the study area. Our study indicated that the water depth, distance to village, coverage of deciduous leaves, open water area, and density of plants were the major predictors of roosting site selection. For daytime resting site selection, the distance to wetland, distance to farmland, and distance to road were the primary predictors. For feeding site selection, the distance to road, quantity of food, plant coverage, distance to village, plant density, distance to wetland, and distance to river were contributing factors, and the distance to road and quantity of food were the most important predictors. The predictive map showed that there were two consistent multi-year daytime resting sites in our study area. Our field work in 2013 using systematic ground-truthing confirmed that this prediction was accurate. Based on this study, we suggest that Lindian plays an important role for migratory birds and that cultivation practices should be adjusted locally. Furthermore, public education programs to promote the concept of the harmonious coexistence of humans and cranes can help successfully protect this species in the long term and eventually lead to its delisting by the IUCN. PMID:24587118

Algorithmic commonalities in the parallel environment

NASA Technical Reports Server (NTRS)

Mcanulty, Michael A.; Wainer, Michael S.

1987-01-01

The ultimate aim of this project was to analyze procedures from substantially different application areas to discover what is either common or peculiar in the process of conversion to the Massively Parallel Processor (MPP). Three areas were identified: molecular dynamic simulation, production systems (rule systems), and various graphics and vision algorithms. To date, only selected graphics procedures have been investigated. They are the most readily available, and produce the most visible results. These include simple polygon patch rendering, raycasting against a constructive solid geometric model, and stochastic or fractal based textured surface algorithms. Only the simplest of conversion strategies, mapping a major loop to the array, has been investigated so far. It is not entirely satisfactory.

Water wells on St. Thomas, U.S. Virgin Islands

USGS Publications Warehouse

Steiger, J.I.; Kessler, Richard

1993-01-01

This report is a compilation of well-inventory data collected from December 1989 to December 1990 on St. Thomas, U.S. Virgin Islands from 367 wells. The report includes well locations on 1982, 7.5 minute series, USGS topographic maps, which are published to scale, and tables of selected well data. The report includes the following well information; well name, U.S. Geological Survey Ground Water Site Identification number, use of water, year well constructed, reported depth of well, measured depth of well, casing diameter, type of well finish and finish interval, land surface altitude of well, depth to water below land surface, date water level measured, and well yield. (USGS)

On Voxel based Iso-Tumor Control Probabilty and Iso-Complication Maps for Selective Boosting and Selective Avoidance Intensity Modulated Radiotherapy

PubMed Central

Kim, Yusung; Tomé, Wolfgang A.

2010-01-01

Summary Voxel based iso-Tumor Control Probability (TCP) maps and iso-Complication maps are proposed as a plan-review tool especially for functional image-guided intensity-modulated radiotherapy (IMRT) strategies such as selective boosting (dose painting) and conformal avoidance IMRT. The maps employ voxel-based phenomenological biological dose-response models for target volumes and normal organs. Two IMRT strategies for prostate cancer, namely conventional uniform IMRT delivering an EUD = 84 Gy (equivalent uniform dose) to the entire PTV and selective boosting delivering an EUD = 82 Gy to the entire PTV, are investigated, to illustrate the advantages of this approach over iso-dose maps. Conventional uniform IMRT did yield a more uniform isodose map to the entire PTV while selective boosting did result in a nonuniform isodose map. However, when employing voxel based iso-TCP maps selective boosting exhibited a more uniform tumor control probability map compared to what could be achieved using conventional uniform IMRT, which showed TCP cold spots in high-risk tumor subvolumes despite delivering a higher EUD to the entire PTV. Voxel based iso-Complication maps are presented for rectum and bladder, and their utilization for selective avoidance IMRT strategies are discussed. We believe as the need for functional image guided treatment planning grows, voxel based iso-TCP and iso-Complication maps will become an important tool to assess the integrity of such treatment plans. PMID:21151734

A comparison of radiometric normalization methods when filling cloud gaps in Lansat imagery.

Treesearch

E. H. Helmer

2007-01-01

Mapping persistently cloudy tropical landscapes with optical satellite imagenery usually requires assembling the clear imagery from several dates. this study compares methods for normalizing image data when filling cloud gaps in Landsat imagery with imagery from other dates.

Toward best practices for developing regional connectivity maps.

PubMed

Beier, Paul; Spencer, Wayne; Baldwin, Robert F; McRae, Brad H

2011-10-01

To conserve ecological connectivity (the ability to support animal movement, gene flow, range shifts, and other ecological and evolutionary processes that require large areas), conservation professionals need coarse-grained maps to serve as decision-support tools or vision statements and fine-grained maps to prescribe site-specific interventions. To date, research has focused primarily on fine-grained maps (linkage designs) covering small areas. In contrast, we devised 7 steps to coarsely map dozens to hundreds of linkages over a large area, such as a nation, province, or ecoregion. We provide recommendations on how to perform each step on the basis of our experiences with 6 projects: California Missing Linkages (2001), Arizona Wildlife Linkage Assessment (2006), California Essential Habitat Connectivity (2010), Two Countries, One Forest (northeastern United States and southeastern Canada) (2010), Washington State Connected Landscapes (2010), and the Bhutan Biological Corridor Complex (2010). The 2 most difficult steps are mapping natural landscape blocks (areas whose conservation value derives from the species and ecological processes within them) and determining which pairs of blocks can feasibly be connected in a way that promotes conservation. Decision rules for mapping natural landscape blocks and determining which pairs of blocks to connect must reflect not only technical criteria, but also the values and priorities of stakeholders. We recommend blocks be mapped on the basis of a combination of naturalness, protection status, linear barriers, and habitat quality for selected species. We describe manual and automated procedures to identify currently functioning or restorable linkages. Once pairs of blocks have been identified, linkage polygons can be mapped by least-cost modeling, other approaches from graph theory, or individual-based movement models. The approaches we outline make assumptions explicit, have outputs that can be improved as underlying data are improved, and help implementers focus strictly on ecological connectivity. ©2011 Society for Conservation Biology.

72. MISSISSIPPI, MONROE CO. MAP OF MONROE COUNTY, ca. 1925 ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

72. MISSISSIPPI, MONROE CO. MAP OF MONROE COUNTY, ca. 1925 Broad side of map of Monroe Co., 'Compliments of Home Mortgage & Realty Co., Amory, Miss.' Orig. scale: ca. 1 in. to 2 mi. No date. Property of Helen (Mrs. Sam L.) Crawford, Hamilton, Ms. Sarcone Photography, Columbus, Ms., Sep 1978. - Bridges of the Upper Tombigbee River Valley, Columbus, Lowndes County, MS

30 CFR 75.372 - Mine ventilation map.

Code of Federal Regulations, 2011 CFR

2011-07-01

...-date map of the mine drawn to a scale of not less than 100 nor more than 500 feet to the inch. A... in the same coalbed within 1,000 feet of existing or projected workings. These workings may be shown... does not exceed 2,000 feet to the inch and is specified on the map. (4) The locations of all known mine...

76 FR 70531 - Tenth Meeting: RTCA Special Committee 217/EUROCAE WG-44: Terrain and Airport Mapping Databases

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-14

... 217/EUROCAE WG-44: Terrain and Airport Mapping Databases AGENCY: Federal Aviation Administration (FAA... Databases: For the tenth meeting DATES: The meeting will be held December 6-9, 2011, from 9 a.m. to 5 p.m... Mapping Databases. The agenda will include the following: December 6, 2011 Open Plenary Session. Chairman...

77 FR 29749 - Twelfth Meeting: RTCA Special Committee 217, Joint with EUROCAE WG-44, Terrain and Airport...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-18

... Committee 217, Joint with EUROCAE WG-44, Terrain and Airport Mapping Databases AGENCY: Federal Aviation... 217, Joint with EUROCAE WG-44, Terrain and Airport Mapping Databases. SUMMARY: The FAA is issuing this..., Terrain and Airport Mapping Databases. DATES: The meeting will be held June 18-22, 2012, from 9:00 a.m.-5...

Towards a global historical biogeography of Palms

NASA Astrophysics Data System (ADS)

Couvreur, Thomas; Baker, William J.; Frigerio, Jean-Marc; Sepulchre, Pierre; Franc, Alain

2017-04-01

Four mechanisms are at work for deciphering historical biogeography of plants : speciation, extinction, migration, and drift (a sort of neutral speciation). The first three mechanisms are under selection pressure of the environment, mainly the climate and connectivity of land masses. Hence, an accurate history of climate and connectivity or non connectivity between landmasses, as well as orogenesis processes, can shed new light on the most likely speciation events and migration routes driven by paleogeography and paleoclimatology. Currently, some models exist (like DIVA) to infer the most parsimonious history (in the number of migration events) knowing the speciation history given by phylogenies (extinction are mostly unknown), in a given setting of climate and landmass connectivity. In a previous project, we have built in collaboration with LSCE a series of paleogeographic and paleoclimatic maps since the Early Cretaceous. We have developed a program, called Aran, which enables to extend DIVA to a time series of varying paleoclimatic and paleogeogarphic conditions. We apply these new methods and data to unravel the biogeographic history of palms (Arecaceae), a pantropical family of 182 genera and >2600 species whose divergence is dated in Late Cretaceous (100 My). Based on a robust dated molecular phylogeny, novel paleoclimatic and paleogeographic maps, we will generate an updated biogeographic history of Arecaceae inferred from the most parsimonious history using Aran. We will discuss the results, and put them in context with what is known and needed to provide a global biogeographic history of tropical palms.

Geomorphologic Mapping of a Last Glacial Maximum Moraine Sequence in the Far Eastern Tibetan Plateau

NASA Astrophysics Data System (ADS)

Lindsay, B. J.; Putnam, A. E.; Strand, P.; Radue, M. J.; Dong, G.; Kong, X.; Li, M.; Sheriff, M.; Stevens, J.

2017-12-01

The abrupt millennial-scale climate events of the last glacial cycle constitute an important component of the ice-age puzzle. A complete explanation of glacial cycles, and their rapid terminations, must account for these millennial climatic `flickers'. Here we present a glacial geomorphologic map of a moraine system in a formerly glaciated valley within the mountains of Litang County in the eastern Tibetan Plateau of China. Geomorphologic mapping was conducted by interpreting satellite imagery, structure-from-motion imagery and digital elevation models, and field observations. This map provides context for a parallel ongoing 10Be exposure-dating effort, the preliminary results of which may be available by the time of this 2017 AGU Fall Meeting. We interpret the mapped moraines to document the millennial-scale pulsebeat of glacier advances in this region during the peak of the last ice age. Because changes in mountain glacier extent in this region are driven by atmospheric temperature, these moraines record past millennial climate changes. Altogether this mapping and exposure-dating approach will provide insight into the mechanisms for millennial-scale glacier and climate fluctuations in the interior of Asia.

Pearl millet [Pennisetum glaucum (L.) R. Br.] consensus linkage map constructed using four RIL mapping populations and newly developed EST-SSRs.

PubMed

Rajaram, Vengaldas; Nepolean, Thirunavukkarasu; Senthilvel, Senapathy; Varshney, Rajeev K; Vadez, Vincent; Srivastava, Rakesh K; Shah, Trushar M; Supriya, Ambawat; Kumar, Sushil; Ramana Kumari, Basava; Bhanuprakash, Amindala; Narasu, Mangamoori Lakshmi; Riera-Lizarazu, Oscar; Hash, Charles Thomas

2013-03-09

Pearl millet [Pennisetum glaucum (L.) R. Br.] is a widely cultivated drought- and high-temperature tolerant C4 cereal grown under dryland, rainfed and irrigated conditions in drought-prone regions of the tropics and sub-tropics of Africa, South Asia and the Americas. It is considered an orphan crop with relatively few genomic and genetic resources. This study was undertaken to increase the EST-based microsatellite marker and genetic resources for this crop to facilitate marker-assisted breeding. Newly developed EST-SSR markers (99), along with previously mapped EST-SSR (17), genomic SSR (53) and STS (2) markers, were used to construct linkage maps of four F7 recombinant inbred populations (RIP) based on crosses ICMB 841-P3 × 863B-P2 (RIP A), H 77/833-2 × PRLT 2/89-33 (RIP B), 81B-P6 × ICMP 451-P8 (RIP C) and PT 732B-P2 × P1449-2-P1 (RIP D). Mapped loci numbers were greatest for RIP A (104), followed by RIP B (78), RIP C (64) and RIP D (59). Total map lengths (Haldane) were 615 cM, 690 cM, 428 cM and 276 cM, respectively. A total of 176 loci detected by 171 primer pairs were mapped among the four crosses. A consensus map of 174 loci (899 cM) detected by 169 primer pairs was constructed using MergeMap to integrate the individual linkage maps. Locus order in the consensus map was well conserved for nearly all linkage groups. Eighty-nine EST-SSR marker loci from this consensus map had significant BLAST hits (top hits with e-value ≤ 1E-10) on the genome sequences of rice, foxtail millet, sorghum, maize and Brachypodium with 35, 88, 58, 48 and 38 loci, respectively. The consensus map developed in the present study contains the largest set of mapped SSRs reported to date for pearl millet, and represents a major consolidation of existing pearl millet genetic mapping information. This study increased numbers of mapped pearl millet SSR markers by >50%, filling important gaps in previously published SSR-based linkage maps for this species and will greatly facilitate SSR-based QTL mapping and applied marker-assisted selection programs.

Using remotely-sensed multispectral imagery to build age models for alluvial fan surfaces

NASA Astrophysics Data System (ADS)

D'Arcy, Mitch; Mason, Philippa J.; Roda Boluda, Duna C.; Whittaker, Alexander C.; Lewis, James

2016-04-01

Accurate exposure age models are essential for much geomorphological field research, and generally depend on laboratory analyses such as radiocarbon, cosmogenic nuclide, or luminescence techniques. These approaches continue to revolutionise geomorphology, however they cannot be deployed remotely or in situ in the field. Therefore other methods are still needed for producing preliminary age models, performing relative dating of surfaces, or selecting sampling sites for the laboratory analyses above. With the widespread availability of detailed multispectral imagery, a promising approach is to use remotely-sensed data to discriminate surfaces with different ages. Here, we use new Landsat 8 Operational Land Imager (OLI) multispectral imagery to characterise the reflectance of 35 alluvial fan surfaces in the semi-arid Owens Valley, California. Alluvial fans are useful landforms to date, as they are widely used to study the effects of tectonics, climate and sediment transport processes on source-to-sink sedimentation. Our target fan surfaces have all been mapped in detail in the field, and have well-constrained exposure ages ranging from modern to ~ 125 ka measured using a high density of 10Be cosmogenic nuclide samples. Despite all having similar granitic compositions, the spectral properties of these surfaces vary systematically with their exposure ages. Older surfaces demonstrate a predictable shift in reflectance across the visible and short-wave infrared spectrum. Simple calculations, such as the brightness ratios of different wavelengths, generate sensitive power law relationships with exposure age that depend on post-depositional alteration processes affecting these surfaces. We investigate what these processes might be in this dryland location, and evaluate the potential for using remotely-sensed multispectral imagery for developing surface age models. The ability to remotely sense relative exposure ages has useful implications for preliminary mapping, selecting sampling sites for laboratory-based exposure age techniques, and correlating existing age constraints to un-sampled surfaces.

187. Photographic copy of original construction drawing dated October 20, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

187. Photographic copy of original construction drawing dated October 20, 1932 (from Record Group 115, Denver Branch of the National Archives, Denver). TUNNEL NO. 1 CONTROLLING WORKS; GENERAL PLAN AND SECTIONS-LOCATION MAP. - Owyhee Dam, Across Owyhee River, Nyssa, Malheur County, OR

An Example of Unsupervised Networks Kohonen's Self-Organizing Feature Map

NASA Technical Reports Server (NTRS)

Niebur, Dagmar

1995-01-01

Kohonen's self-organizing feature map belongs to a class of unsupervised artificial neural network commonly referred to as topographic maps. It serves two purposes, the quantization and dimensionality reduction of date. A short description of its history and its biological context is given. We show that the inherent classification properties of the feature map make it a suitable candidate for solving the classification task in power system areas like load forecasting, fault diagnosis and security assessment.

Capturing total chronological and spatial uncertainties in palaeo-ice sheet reconstructions: the DATED example

NASA Astrophysics Data System (ADS)

Hughes, Anna; Gyllencreutz, Richard; Mangerud, Jan; Svendsen, John Inge

2017-04-01

Glacial geologists generate empirical reconstructions of former ice-sheet dynamics by combining evidence from the preserved record of glacial landforms (e.g. end moraines, lineations) and sediments with chronological evidence (mainly numerical dates derived predominantly from radiocarbon, exposure and luminescence techniques). However the geomorphological and sedimentological footprints and chronological data are both incomplete records in both space and time, and all have multiple types of uncertainty associated with them. To understand ice sheets' response to climate we need numerical models of ice-sheet dynamics based on physical principles. To test and/or constrain such models, empirical reconstructions of past ice sheets that capture and acknowledge all uncertainties are required. In 2005 we started a project (Database of the Eurasian Deglaciation, DATED) to produce an empirical reconstruction of the evolution of the last Eurasian ice sheets, (including the British-Irish, Scandinavian and Svalbard-Barents-Kara Seas ice sheets) that is fully documented, specified in time, and includes uncertainty estimates. Over 5000 dates relevant to constraining ice build-up and retreat were assessed for reliability and used together with published ice-sheet margin positions based on glacial geomorphology to reconstruct time-slice maps of the ice sheets' extent. The DATED maps show synchronous ice margins with maximum-minimum uncertainty bounds for every 1000 years between 25-10 kyr ago. In the first version of results (DATED-1; Hughes et al. 2016) all uncertainties (both quantitative and qualitative, e.g. precision and accuracy of numerical dates, correlation of moraines, stratigraphic interpretations) were combined based on our best glaciological-geological assessment and expressed in terms of distance as a 'fuzzy' margin. Large uncertainties (>100 km) exist; predominantly across marine sectors and other locations where there are spatial gaps in the dating record (e.g. the timing of coalescence and separation of the Scandinavian and Svalbard-Barents-Kara ice sheets) but also in well-studied areas due to conflicting yet apparently equally robust data. In the four years since the DATED-1 census (1 January 2013), the volume of new information (from both dates and mapped glacial geomorphology) has grown significantly ( 1000 new dates). Here, we present work towards the updated version of results, DATED-2, that attempts to further reduce and explicitly report all uncertainties inherent in ice sheet reconstructions. Hughes, A. L. C., Gyllencreutz, R., Lohne, Ø. S., Mangerud, J., Svendsen, J. I. 2016: The last Eurasian ice sheets - a chronological database and time-slice reconstruction, DATED-1. Boreas, 45, 1-45. 10.1111/bor.12142

Documenting Uncertainty and Error in Gridded Growing Degree Day and Spring Onset Maps Generated by the USA National Phenology Network

NASA Astrophysics Data System (ADS)

Crimmins, T. M.; Switzer, J.; Rosemartin, A.; Marsh, L.; Gerst, K.; Crimmins, M.; Weltzin, J. F.

2016-12-01

Since 2016 the USA National Phenology Network (USA-NPN; www.usanpn.org) has produced and delivered daily maps and short-term forecasts of accumulated growing degree days and spring onset dates at fine spatial scale for the conterminous United States. Because accumulated temperature is a strong driver of phenological transitions in plants and animals, including leaf-out, flowering, fruit ripening, and migration, these data products have utility for a wide range of natural resource planning and management applications, including scheduling invasive species and pest detection and control activities, determining planting dates, anticipating allergy outbreaks and planning agricultural harvest dates. The USA-NPN is a national-scale program that supports scientific advancement and decision-making by collecting, storing, and sharing phenology data and information. We will be expanding the suite of gridded map products offered by the USA-NPN to include predictive species-specific maps of phenological transitions in plants and animals at fine spatial and temporal resolution in the future. Data products, such as the gridded maps currently produced by the USA-NPN, inherently contain uncertainty and error arising from multiple sources, including error propagated forward from underlying climate data and from the models implemented. As providing high-quality, vetted data in a transparent way is central to the USA-NPN, we aim to identify and report the sources and magnitude of uncertainty and error in gridded maps and forecast products. At present, we compare our real-time gridded products to independent, trustworthy data sources, such as the Climate Reference Network, on a daily basis and report Mean Absolute Error and bias through an interactive online dashboard.

Allelic Analysis of Sheath Blight Resistance with Association Mapping in Rice

PubMed Central

Jia, Limeng; Yan, Wengui; Zhu, Chengsong; Agrama, Hesham A.; Jackson, Aaron; Yeater, Kathleen; Li, Xiaobai; Huang, Bihu; Hu, Biaolin; McClung, Anna; Wu, Dianxing

2012-01-01

Sheath blight (ShB) caused by the soil-borne pathogen Rhizoctonia solani is one of the most devastating diseases in rice world-wide. Global attention has focused on examining individual mapping populations for quantitative trait loci (QTLs) for ShB resistance, but to date no study has taken advantage of association mapping to examine hundreds of lines for potentially novel QTLs. Our objective was to identify ShB QTLs via association mapping in rice using 217 sub-core entries from the USDA rice core collection, which were phenotyped with a micro-chamber screening method and genotyped with 155 genome-wide markers. Structure analysis divided the mapping panel into five groups, and model comparison revealed that PCA5 with genomic control was the best model for association mapping of ShB. Ten marker loci on seven chromosomes were significantly associated with response to the ShB pathogen. Among multiple alleles in each identified loci, the allele contributing the greatest effect to ShB resistance was named the putative resistant allele. Among 217 entries, entry GSOR 310389 contained the most putative resistant alleles, eight out of ten. The number of putative resistant alleles presented in an entry was highly and significantly correlated with the decrease of ShB rating (r = −0.535) or the increase of ShB resistance. Majority of the resistant entries that contained a large number of the putative resistant alleles belonged to indica, which is consistent with a general observation that most ShB resistant accessions are of indica origin. These findings demonstrate the potential to improve breeding efficiency by using marker-assisted selection to pyramid putative resistant alleles from various loci in a cultivar for enhanced ShB resistance in rice. PMID:22427867

Object-oriented classification of drumlins from digital elevation models

NASA Astrophysics Data System (ADS)

Saha, Kakoli

Drumlins are common elements of glaciated landscapes which are easily identified by their distinct morphometric characteristics including shape, length/width ratio, elongation ratio, and uniform direction. To date, most researchers have mapped drumlins by tracing contours on maps, or through on-screen digitization directly on top of hillshaded digital elevation models (DEMs). This paper seeks to utilize the unique morphometric characteristics of drumlins and investigates automated extraction of the landforms as objects from DEMs by Definiens Developer software (V.7), using the 30 m United States Geological Survey National Elevation Dataset DEM as input. The Chautauqua drumlin field in Pennsylvania and upstate New York, USA was chosen as a study area. As the study area is huge (approximately covers 2500 sq.km. of area), small test areas were selected for initial testing of the method. Individual polygons representing the drumlins were extracted from the elevation data set by automated recognition, using Definiens' Multiresolution Segmentation tool, followed by rule-based classification. Subsequently parameters such as length, width and length-width ratio, perimeter and area were measured automatically. To test the accuracy of the method, a second base map was produced by manual on-screen digitization of drumlins from topographic maps and the same morphometric parameters were extracted from the mapped landforms using Definiens Developer. Statistical comparison showed a high agreement between the two methods confirming that object-oriented classification for extraction of drumlins can be used for mapping these landforms. The proposed method represents an attempt to solve the problem by providing a generalized rule-set for mass extraction of drumlins. To check that the automated extraction process was next applied to a larger area. Results showed that the proposed method is as successful for the bigger area as it was for the smaller test areas.

186. Photocopy of drawing, Twin Falls Canal Company, date unknown. ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

186. Photocopy of drawing, Twin Falls Canal Company, date unknown. DRY CREEK RESERVOIR, CASSIA COUNTY (NOW TWIN FALLS COUNTY); MAP. - Milner Dam & Main Canal: Twin Falls Canal Company, On Snake River, 11 miles West of city of Burley, Idaho, Twin Falls, Twin Falls County, ID

Object-Based Paddy Rice Mapping Using HJ-1A/B Data and Temporal Features Extracted from Time Series MODIS NDVI Data

PubMed Central

Singha, Mrinal; Wu, Bingfang; Zhang, Miao

2016-01-01

Accurate and timely mapping of paddy rice is vital for food security and environmental sustainability. This study evaluates the utility of temporal features extracted from coarse resolution data for object-based paddy rice classification of fine resolution data. The coarse resolution vegetation index data is first fused with the fine resolution data to generate the time series fine resolution data. Temporal features are extracted from the fused data and added with the multi-spectral data to improve the classification accuracy. Temporal features provided the crop growth information, while multi-spectral data provided the pattern variation of paddy rice. The achieved overall classification accuracy and kappa coefficient were 84.37% and 0.68, respectively. The results indicate that the use of temporal features improved the overall classification accuracy of a single-date multi-spectral image by 18.75% from 65.62% to 84.37%. The minimum sensitivity (MS) of the paddy rice classification has also been improved. The comparison showed that the mapped paddy area was analogous to the agricultural statistics at the district level. This work also highlighted the importance of feature selection to achieve higher classification accuracies. These results demonstrate the potential of the combined use of temporal and spectral features for accurate paddy rice classification. PMID:28025525

Object-Based Paddy Rice Mapping Using HJ-1A/B Data and Temporal Features Extracted from Time Series MODIS NDVI Data.

PubMed

Singha, Mrinal; Wu, Bingfang; Zhang, Miao

2016-12-22

Accurate and timely mapping of paddy rice is vital for food security and environmental sustainability. This study evaluates the utility of temporal features extracted from coarse resolution data for object-based paddy rice classification of fine resolution data. The coarse resolution vegetation index data is first fused with the fine resolution data to generate the time series fine resolution data. Temporal features are extracted from the fused data and added with the multi-spectral data to improve the classification accuracy. Temporal features provided the crop growth information, while multi-spectral data provided the pattern variation of paddy rice. The achieved overall classification accuracy and kappa coefficient were 84.37% and 0.68, respectively. The results indicate that the use of temporal features improved the overall classification accuracy of a single-date multi-spectral image by 18.75% from 65.62% to 84.37%. The minimum sensitivity (MS) of the paddy rice classification has also been improved. The comparison showed that the mapped paddy area was analogous to the agricultural statistics at the district level. This work also highlighted the importance of feature selection to achieve higher classification accuracies. These results demonstrate the potential of the combined use of temporal and spectral features for accurate paddy rice classification.

The First Global Geological Map of Mercury

NASA Astrophysics Data System (ADS)

Prockter, L. M.; Head, J. W., III; Byrne, P. K.; Denevi, B. W.; Kinczyk, M. J.; Fassett, C.; Whitten, J. L.; Thomas, R.; Ernst, C. M.

2015-12-01

Geological maps are tools with which to understand the distribution and age relationships of surface geological units and structural features on planetary surfaces. Regional and limited global mapping of Mercury has already yielded valuable science results, elucidating the history and distribution of several types of units and features, such as regional plains, tectonic structures, and pyroclastic deposits. To date, however, no global geological map of Mercury exists, and there is currently no commonly accepted set of standardized unit descriptions and nomenclature. With MESSENGER monochrome image data, we are undertaking the global geological mapping of Mercury at the 1:15M scale applying standard U.S. Geological Survey mapping guidelines. This map will enable the development of the first global stratigraphic column of Mercury, will facilitate comparisons among surface units distributed discontinuously across the planet, and will provide guidelines for mappers so that future mapping efforts will be consistent and broadly interpretable by the scientific community. To date we have incorporated three major datasets into the global geological map: smooth plains units, tectonic structures, and impact craters and basins >20 km in diameter. We have classified most of these craters by relative age on the basis of the state of preservation of morphological features and standard classification schemes first applied to Mercury by the Mariner 10 imaging team. Additional datasets to be incorporated include intercrater plains units and crater ejecta deposits. In some regions MESSENGER color data is used to supplement the monochrome data, to help elucidate different plains units. The final map will be published online, together with a peer-reviewed publication. Further, a digital version of the map, containing individual map layers, will be made publicly available for use within geographic information systems (GISs).

5. Photocopy titled 'Map of Naval Ammunition Depot, Bremerton (Puget ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

5. Photocopy titled 'Map of Naval Ammunition Depot, Bremerton (Puget Sound), Wash.' dated June 30, 1947. Buildings 103 and 104 are shaded and located left of center near top of map. HABS film is an 8x10' high-contrast negative made from original map in the collection of the Department of Public Works, Puget Sound Naval Shipyard, Bremerton, WA. - Puget Sound Naval Shipyard, Munitions Storage Bunker, Naval Ammunitions Depot, North of Campbell Trail, Bremerton, Kitsap County, WA

Genome-Wide Association of Rice Blast Disease Resistance and Yield-Related Components of Rice.

PubMed

Wang, Xueyan; Jia, Melissa H; Ghai, Pooja; Lee, Fleet N; Jia, Yulin

2015-12-01

Robust disease resistance may require an expenditure of energy that may limit crop yield potential. In the present study, a subset of a United States Department of Agriculture rice core collection consisting of 151 accessions was selected using a major blast resistance (R) gene, Pi-ta, marker and was genotyped with 156 simple sequence repeat (SSR) markers. Disease reactions to Magnaporthe oryzae, the causal agent of rice blast disease, were evaluated under greenhouse and field conditions, and heading date, plant height, paddy and brown seed weight in two field environments were analyzed, using an association mapping approach. A total of 21 SSR markers distributed among rice chromosomes 2 to 12 were associated with blast resistance, and 16 SSR markers were associated with seed weight, heading date, and plant height. Most noticeably, shorter plants were significantly correlated with resistance to blast, rice genomes with Pi-ta were associated with lighter seed weights, and the susceptible alleles of RM171 and RM6544 were associated with heavier seed weight. These findings unraveled a complex relationship between disease resistance and yield-related components.

Evaluation and comparison of ERTS measurements of major crops and soil associations for selected sites in the central United States

NASA Technical Reports Server (NTRS)

Baumgardner, M. F. (Principal Investigator)

1973-01-01

The author has identified the following significant results. The most significant result was the use of the temporal overlay technique where the computer was used to overlay ERTS-1 data from three different dates (9 Oct., 14 Nov., 2 Dec.). The registration of MSS digital data from different dates was estimated to be accurate within one half resolution element. The temporal overlay capability provides a significant advance in machine-processing of MSS data. It is no longer essential to go through the tedious exercise of locating ground observation sites on the digital data from each ERTS-1 overpass. Once the address of a ground observation site has been located on a digital tape from any ERTS-1 overpass, the overlay technique can be used to locate the same address on a digital tape of MSS data from any other ERTS-1 pass over the same area. The temporal overlay technique also adds a valuable dimension for identifying and mapping changes in vegetation, water, and other dynamic surface features.

Condensed listing of surface boreholes at the Waste Isolation Pilot Plant Project through 31 December 1995

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hill, L.R.; Aguilar, R.; Mercer, J.W.

This report contains a condensed listing of Waste Isolation Pilot Plant (WIPP) project surface boreholes drilled for the purpose of site selection and characterization through 31 December 1995. The US Department of Energy (DOE) sponsored the drilling activities, which were conducted primarily by Sandia National Laboratories. The listing provides physical attributes such as location (township, range, section, and state-plane coordinates), elevation, and total borehole depth, as well as the purpose for the borehole, drilling dates, and information about extracted cores. The report also presents the hole status (plugged, testing, monitoring, etc.) and includes salient findings and references. Maps with boreholemore » locations and times-of-drilling charts are included.« less

Spatial mapping and prediction of Plasmodium falciparum infection risk among school-aged children in Côte d'Ivoire.

PubMed

Houngbedji, Clarisse A; Chammartin, Frédérique; Yapi, Richard B; Hürlimann, Eveline; N'Dri, Prisca B; Silué, Kigbafori D; Soro, Gotianwa; Koudou, Benjamin G; Assi, Serge-Brice; N'Goran, Eliézer K; Fantodji, Agathe; Utzinger, Jürg; Vounatsou, Penelope; Raso, Giovanna

2016-09-07

In Côte d'Ivoire, malaria remains a major public health issue, and thus a priority to be tackled. The aim of this study was to identify spatially explicit indicators of Plasmodium falciparum infection among school-aged children and to undertake a model-based spatial prediction of P. falciparum infection risk using environmental predictors. A cross-sectional survey was conducted, including parasitological examinations and interviews with more than 5,000 children from 93 schools across Côte d'Ivoire. A finger-prick blood sample was obtained from each child to determine Plasmodium species-specific infection and parasitaemia using Giemsa-stained thick and thin blood films. Household socioeconomic status was assessed through asset ownership and household characteristics. Children were interviewed for preventive measures against malaria. Environmental data were gathered from satellite images and digitized maps. A Bayesian geostatistical stochastic search variable selection procedure was employed to identify factors related to P. falciparum infection risk. Bayesian geostatistical logistic regression models were used to map the spatial distribution of P. falciparum infection and to predict the infection prevalence at non-sampled locations via Bayesian kriging. Complete data sets were available from 5,322 children aged 5-16 years across Côte d'Ivoire. P. falciparum was the predominant species (94.5 %). The Bayesian geostatistical variable selection procedure identified land cover and socioeconomic status as important predictors for infection risk with P. falciparum. Model-based prediction identified high P. falciparum infection risk in the north, central-east, south-east, west and south-west of Côte d'Ivoire. Low-risk areas were found in the south-eastern area close to Abidjan and the south-central and west-central part of the country. The P. falciparum infection risk and related uncertainty estimates for school-aged children in Côte d'Ivoire represent the most up-to-date malaria risk maps. These tools can be used for spatial targeting of malaria control interventions.

32 CFR 644.42 - Appraisal report.

Code of Federal Regulations, 2013 CFR

2013-07-01

... designed, dates of original construction and/or additions; include, for privately owned property, a ten... to show how they indicate the value of the land being appraised. 13. VALUE ESTIMATE BY COMPARATIVE... MAP. (Within the city or area) 19. COMPARATIVE MAP DATA. Show geographic location of the appraised...

32 CFR 644.42 - Appraisal report.

Code of Federal Regulations, 2010 CFR

2010-07-01

... designed, dates of original construction and/or additions; include, for privately owned property, a ten... to show how they indicate the value of the land being appraised. 13. VALUE ESTIMATE BY COMPARATIVE... MAP. (Within the city or area) 19. COMPARATIVE MAP DATA. Show geographic location of the appraised...

32 CFR 644.42 - Appraisal report.

Code of Federal Regulations, 2014 CFR

2014-07-01

... designed, dates of original construction and/or additions; include, for privately owned property, a ten... to show how they indicate the value of the land being appraised. 13. VALUE ESTIMATE BY COMPARATIVE... MAP. (Within the city or area) 19. COMPARATIVE MAP DATA. Show geographic location of the appraised...

32 CFR 644.42 - Appraisal report.

Code of Federal Regulations, 2011 CFR

2011-07-01

... designed, dates of original construction and/or additions; include, for privately owned property, a ten... to show how they indicate the value of the land being appraised. 13. VALUE ESTIMATE BY COMPARATIVE... MAP. (Within the city or area) 19. COMPARATIVE MAP DATA. Show geographic location of the appraised...

32 CFR 644.42 - Appraisal report.

Code of Federal Regulations, 2012 CFR

2012-07-01

... designed, dates of original construction and/or additions; include, for privately owned property, a ten... to show how they indicate the value of the land being appraised. 13. VALUE ESTIMATE BY COMPARATIVE... MAP. (Within the city or area) 19. COMPARATIVE MAP DATA. Show geographic location of the appraised...

78 FR 76241 - Rescission of Quarterly Financial Reporting Requirements

Federal Register 2010, 2011, 2012, 2013, 2014

2013-12-17

... for Progress in the 21st Century Act, Public Law 112-141 (MAP-21). FMCSA, however, has lessened the... reporting requirements remain. DATES: Effective Date: January 16, 2014. FOR FURTHER INFORMATION CONTACT: If... other things, to prepare plans for reviewing existing rules. On February 16, 2011, DOT published a...

Modeling Spatial Maps Inspired by the Hippocampal System

DTIC Science & Technology

2015-08-24

assigned to the award James Lawton Reporting Period Start Date 04/01/2012 Reporting Period End Date 03/31/2015 Abstract How the hippocampus encodes both...Manager, if any: During this project the Program Manager was changed from Dr. Jay Ayung to Dr. James Lawton . Extensions granted or milestones slipped

Mapping quantitative trait loci associated with chilling requirement, heat requirement and bloom date in peach [Prunus persica (L.) Batsch

USDA-ARS?s Scientific Manuscript database

Chilling requirement (CR), together with heat requirement (HR), determines blooming date (BD) and climatic distribution of genotypes of temperate tree species. However, information on the genetic components underlying these important traits remains unknown or fragmentary. Here the identification o...

Do physical maturity and birth date predict talent in male youth ice hockey players?

PubMed

Sherar, Lauren B; Baxter-Jones, Adam D G; Faulkner, Robert A; Russell, Keith W

2007-06-01

The aim of this study was to examine the relationships among biological maturity, physical size, relative age (i.e. birth date), and selection into a male Canadian provincial age-banded ice hockey team. In 2003, 619 male ice hockey players aged 14-15 years attended Saskatchewan provincial team selection camps, 281 of whom participated in the present study. Data from 93 age-matched controls were obtained from the Saskatchewan Pediatric Bone Mineral Accrual Study (1991-1997). During the initial selection camps, birth dates, heights, sitting heights, and body masses were recorded. Age at peak height velocity, an indicator of biological maturity, was determined in the controls and predicted in the ice hockey players. Data were analysed using one-way analysis of variance, logistic regression, and a Kolmogorov-Smirnov test. The ice hockey players selected for the final team were taller, heavier, and more mature (P < 0.05) than both the unselected players and the age-matched controls. Furthermore, age at peak height velocity predicted (P < 0.05) being selected at the first and second selection camps. The birth dates of those players selected for the team were positively skewed, with the majority of those selected being born in the months January to June. In conclusion, team selectors appear to preferentially select early maturing male ice hockey players who have birth dates early in the selection year.

Development of new mapping standards for geological surveys in Greenland

NASA Astrophysics Data System (ADS)

Mätzler, Eva; langley, Kirsty; Hollis, Julie; Heide-Jørgensen, Helene

2017-04-01

The current official topographic and geological maps of Greenland are in scale of 1:250:000 and 1:500.000 respectively, allowing only very limited amount of detail. The maps are outdated, and periglacial landscapes have changed significantly since the acquisition date. Hence, new affordable mapping products of high quality are in demand that can be available within a restricted time frame. In order to fulfill those demands a new mapping standard based on satellite imagery was developed, where classifications are mainly carried out with algorithms suitable for automatization. A Digital Elevation Model (ArcticDEM) was applied allowing examination of topographic and geological structures and 3D visualizing. Information on topographic features and lithology was extracted based on analysis of spectral characteristics from different multispectral data sources (Landsat 8, ASTER, WorldView-3) partly combined with the DEM. A first product is completed, and validation was carried out by field surveys. Field and remotely sensed data were integrated into a GIS database, and derived data will be freely available providing a valuable tool for planning and carrying out mineral exploration and other field activities. This study offers a method for generating up-to-date, low-cost and high quality mapping products suitable for Arctic regions, where accessibility is restricted due to remoteness and lack of infrastructure.

Statistical density modification using local pattern matching

DOEpatents

Terwilliger, Thomas C.

2007-01-23

A computer implemented method modifies an experimental electron density map. A set of selected known experimental and model electron density maps is provided and standard templates of electron density are created from the selected experimental and model electron density maps by clustering and averaging values of electron density in a spherical region about each point in a grid that defines each selected known experimental and model electron density maps. Histograms are also created from the selected experimental and model electron density maps that relate the value of electron density at the center of each of the spherical regions to a correlation coefficient of a density surrounding each corresponding grid point in each one of the standard templates. The standard templates and the histograms are applied to grid points on the experimental electron density map to form new estimates of electron density at each grid point in the experimental electron density map.

76 FR 14284 - Domestic Shipping Services Product Launch of Parcel Select Regional Ground

Federal Register 2010, 2011, 2012, 2013, 2014

2011-03-16

... POSTAL SERVICE 39 CFR Part 111 Domestic Shipping Services Product Launch of Parcel Select Regional... competitive shipping option, Parcel Select Regional Ground \\TM\\ service. DATES: Effective Date: April 17, 2011... classification changes outlined by USPS[supreg] on the introduction of Parcel Select Regional Ground service...

77 FR 71702 - Possession, Use, and Transfer of Select Agents and Toxins; Biennial Review

Federal Register 2010, 2011, 2012, 2013, 2014

2012-12-04

... of Select Agents and Toxins; Biennial Review AGENCY: Centers for Disease Control and Prevention (CDC... designated certain select agents and toxins as Tier 1 agents. DATES: Effective Date: Effective December 4, 2012. FOR FURTHER INFORMATION CONTACT: Robbin Weyant, Director, Division of Select Agents and Toxins...

Detection of changes in semi-natural grasslands by cross correlation analysis with WorldView-2 images and new Landsat 8 data.

PubMed

Tarantino, Cristina; Adamo, Maria; Lucas, Richard; Blonda, Palma

2016-03-15

Focusing on a Mediterranean Natura 2000 site in Italy, the effectiveness of the cross correlation analysis (CCA) technique for quantifying change in the area of semi-natural grasslands at different spatial resolutions (grain) was evaluated. In a fine scale analysis (2 m), inputs to the CCA were a) a semi-natural grasslands layer extracted from an existing validated land cover/land use (LC/LU) map (1:5000, time T 1 ) and b) a more recent single date very high resolution (VHR) WorldView-2 image (time T 2 ), with T 2  > T 1 . The changes identified through the CCA were compared against those detected by applying a traditional post-classification comparison (PCC) technique to the same reference T 1 map and an updated T 2 map obtained by a knowledge driven classification of four multi-seasonal Worldview-2 input images. Specific changes observed were those associated with agricultural intensification and fires. The study concluded that prior knowledge (spectral class signatures, awareness of local agricultural practices and pressures) was needed for the selection of the most appropriate image (in terms of seasonality) to be acquired at T 2 . CCA was also applied to the comparison of the existing T 1 map with recent high resolution (HR) Landsat 8 OLS images. The areas of change detected at VHR and HR were broadly similar with larger error values in HR change images.

The National Map - geographic names

USGS Publications Warehouse

Yost, Lou; Carswell, William J.

2009-01-01

The Geographic Names Information System (GNIS), developed by the U.S. Geological Survey (USGS) in cooperation with the U.S. Board on Geographic Names (BGN), contains information about the official names for places, features, and areas in the 50 States, the District of Columbia, the territories and outlying areas of the United States, including Antarctica. It is the geographic names component of The National Map. The BGN maintains working relationships with State names authorities to cooperate in achieving the standardization of geographic names. The GNIS contains records on more than 2 million geographic names in the United States - from populated places, schools, reservoirs, and parks to streams, valleys, springs, ridges, and every feature type except roads and highways. Entries include information such as the federally-recognized name and variant names and spellings for the feature; former names; the status of the name as determined by the BGN; county or counties in which each named feature is located; geographic coordinates that locate the approximate center of an aerial feature or the mouth and source of a linear feature, such as a stream; name of the cell of the USGS topographic map or maps on which the feature may appear; elevation figures derived from the National Elevation Dataset; bibliographic code for the source of the name; BGN decision dates and historical information are available for some features. Data from the GNIS are used for emergency preparedness, mapmaking, local and regional planning, service delivery routing, marketing, site selection, environmental analysis, genealogical research, and other applications.

Planetary Cartography and Mapping: where we are Today, and where we are Heading For?

NASA Astrophysics Data System (ADS)

Naß, A.; Di, K.; Elgner, S.; van Gasselt, S.; Hare, T.; Hargitai, H.; Karachevtseva, I.; Kersten, E.; Manaud, N.; Roatsch, T.; Rossi, A. P.; Skinner, J., Jr.; Wählisch, M.

2017-07-01

Planetary Cartography does not only provides the basis to support planning (e.g., landing-site selection, orbital observations, traverse planning) and to facilitate mission conduct during the lifetime of a mission (e.g., observation tracking and hazard avoidance). It also provides the means to create science products after successful termination of a planetary mission by distilling data into maps. After a mission's lifetime, data and higher level products like mosaics and digital terrain models (DTMs) are stored in archives - and eventually into maps and higher-level data products - to form a basis for research and for new scientific and engineering studies. The complexity of such tasks increases with every new dataset that has been put on this stack of information, and in the same way as the complexity of autonomous probes increases, also tools that support these challenges require new levels of sophistication. In planetary science, cartography and mapping have a history dating back to the roots of telescopic space exploration and are now facing new technological and organizational challenges with the rise of new missions, new global initiatives, organizations and opening research markets. The focus of this contribution is to summarize recent activities in Planetary Cartography, highlighting current issues the community is facing to derive the future opportunities in this field. By this we would like to invite cartographers/researchers to join this community and to start thinking about how we can jointly solve some of these challenges.

A Map of Clinical Dermatology Research Centers in Spain: Results of the MaIND Study.

PubMed

Molina-Leyva, A; Descalzo, M A; García-Doval, I

2017-11-01

Bibliometric indicators and analyses of clinical research articles can help to quantify the scientific production of hospitals and institutions and identify their main areas of research. The aim of this study was to draw up a bibliometric map of clinical research in dermatology by Spanish hospitals and institutions through an analysis of quantitative, qualitative, and topic-based variables. Bibliometric study of clinical research articles that met the inclusion criteria and had a definitive publication date between 2005 and 2014 in PubMed or Embase in which the corresponding author's affiliation was a Spanish dermatology department or institution. Barcelona and Madrid were the provinces with the highest number of articles and citations. The centers with the most articles and citations were Hospital Clínic and Instituto Valenciano de Oncología. Those 2 hospitals also produced the highest number of articles on the most common research topic identified: melanoma. Because the articles were selected on the basis of the affiliation of the corresponding author to a Spanish dermatology center, this analysis does not include collaborative studies or clinical research studies led by nondermatology centers. We have created a bibliometric map of clinical dermatology research in Spain that shows the distribution of scientific production and the main areas of research by province and hospital/institution. This map could be useful for education and research purposes. Copyright © 2017 AEDV. Publicado por Elsevier España, S.L.U. All rights reserved.

Mapping the literature of rehabilitation nursing

PubMed Central

Spasser, Mark A.; Weismantel, Arlene

2006-01-01

Objective: This paper describes a citation analysis of the literature of rehabilitation nursing, conducted as part of the Medical Library Association's Nursing and Allied Health Section's the “Mapping the Literature of Nursing Project.” Methods: One core journal, Rehabilitation Nursing, was selected, being both the official journal of the Association of Rehabilitation Nurses and the only journal devoted exclusively to rehabilitation nursing. Citations were analyzed according to format and date and stratified according to Bradford's Law of Scattering. Results: The nineteen journals that constitute Zone 1 contribute the same number of citations as the eighty-six journals that make up Zone 2. OCLC ArticleFirst, PubMed/MEDLINE, and CINAHL provide the most inclusive coverage of the rehabilitation literature. The source journal, Rehabilitation Nursing, is the most important journal in Zone 1 and thus the most influential rehabilitation nursing journal. Relative degrees of database coverage do not change between Zones 1 and 2. Conclusion: The journals in Zones 1 and 2 collectively represent most of the important subspecialties of rehabilitation nursing, such as the physiological, sociopsychological, and community reintegration issues involved in the long-term rehabilitation process. PMID:16710460

Mapping the literature of rehabilitation nursing.

PubMed

Spasser, Mark A; Weismantel, Arlene

2006-04-01

This paper describes a citation analysis of the literature of rehabilitation nursing, conducted as part of the Medical Library Association's Nursing and Allied Health Section's the "Mapping the Literature of Nursing Project." One core journal, Rehabilitation Nursing, was selected, being both the official journal of the Association of Rehabilitation Nurses and the only journal devoted exclusively to rehabilitation nursing. Citations were analyzed according to format and date and stratified according to Bradford's Law of Scattering. The nineteen journals that constitute Zone 1 contribute the same number of citations as the eighty-six journals that make up Zone 2. OCLC ArticleFirst, PubMed/MEDLINE, and CINAHL provide the most inclusive coverage of the rehabilitation literature. The source journal, Rehabilitation Nursing, is the most important journal in Zone 1 and thus the most influential rehabilitation nursing journal. Relative degrees of database coverage do not change between Zones 1 and 2. The journals in Zones 1 and 2 collectively represent most of the important subspecialties of rehabilitation nursing, such as the physiological, sociopsychological, and community reintegration issues involved in the long-term rehabilitation process.

41 CFR Appendix E to Chapter 301 - Suggested Guidance for Conference Planning

Code of Federal Regulations, 2013 CFR

2013-07-01

..., and logistics, e.g., schedule, exhibits, speaker. • Making suggestions as to who should attend...). • Registration instructions. • Registration deadline date. • Detailed area map and driving instructions.... • Identify designated smoking areas. • Special events. • Message center information. • Area map. • Other...

41 CFR Appendix E to Chapter 301 - Suggested Guidance for Conference Planning

Code of Federal Regulations, 2012 CFR

2012-07-01

..., and logistics, e.g., schedule, exhibits, speaker. • Making suggestions as to who should attend...). • Registration instructions. • Registration deadline date. • Detailed area map and driving instructions.... • Identify designated smoking areas. • Special events. • Message center information. • Area map. • Other...

Historical Perspectives and Recommendations for revision of the Agricultural Handbook 296

USDA-ARS?s Scientific Manuscript database

While the most recent edition of Agriculture Handbook 296 was released in 2006, many of the geographic boundaries consistently mimic historic map products of generalized regional and national soil-survey maps (some dating back to the 1930s). Furthermore, the underlying concepts and technologies used...

30 CFR 57.11053 - Escape and evacuation plans.

Code of Federal Regulations, 2013 CFR

2013-07-01

... from the date of the last review. The plan shall include: (a) Mine maps or diagrams showing directions of principal air flow, location of escape routes and locations of existing telephones, primary fans... maps or diagrams shall be posted at all shaft stations and in underground shops, lunchrooms, and...

30 CFR 57.11053 - Escape and evacuation plans.

Code of Federal Regulations, 2014 CFR

2014-07-01

... from the date of the last review. The plan shall include: (a) Mine maps or diagrams showing directions of principal air flow, location of escape routes and locations of existing telephones, primary fans... maps or diagrams shall be posted at all shaft stations and in underground shops, lunchrooms, and...

30 CFR 57.11053 - Escape and evacuation plans.

Code of Federal Regulations, 2011 CFR

2011-07-01

... from the date of the last review. The plan shall include: (a) Mine maps or diagrams showing directions of principal air flow, location of escape routes and locations of existing telephones, primary fans... maps or diagrams shall be posted at all shaft stations and in underground shops, lunchrooms, and...

30 CFR 57.11053 - Escape and evacuation plans.

Code of Federal Regulations, 2012 CFR

2012-07-01

... from the date of the last review. The plan shall include: (a) Mine maps or diagrams showing directions of principal air flow, location of escape routes and locations of existing telephones, primary fans... maps or diagrams shall be posted at all shaft stations and in underground shops, lunchrooms, and...

30 CFR 57.11053 - Escape and evacuation plans.

Code of Federal Regulations, 2010 CFR

2010-07-01

... from the date of the last review. The plan shall include: (a) Mine maps or diagrams showing directions of principal air flow, location of escape routes and locations of existing telephones, primary fans... maps or diagrams shall be posted at all shaft stations and in underground shops, lunchrooms, and...

IntegratedMap: a Web interface for integrating genetic map data.

PubMed

Yang, Hongyu; Wang, Hongyu; Gingle, Alan R

2005-05-01

IntegratedMap is a Web application and database schema for storing and interactively displaying genetic map data. Its Web interface includes a menu for direct chromosome/linkage group selection, a search form for selection based on mapped object location and linkage group displays. An overview display provides convenient access to the full range of mapped and anchored object types with genetic locus details, such as numbers, types and names of mapped/anchored objects displayed in a compact scrollable list box that automatically updates based on selected map location and object type. Also, multilinkage group and localized map views are available along with links that can be configured for integration with other Web resources. IntegratedMap is implemented in C#/ASP.NET and the package, including a MySQL schema creation script, is available from http://cggc.agtec.uga.edu/Data/download.asp

Isotopic ages of rocks in the northern Front Range, Colorado

USGS Publications Warehouse

Wilson, Anna B.; Bryant, Bruce

2006-01-01

These maps, and the tables that accompany them, are a compilation of isotopic age determinations of rocks and minerals in four 1:100,000 quadrangles in the northern and central Front Range, Colorado. Phanerozoic (primarily Tertiary and Cretaceous) age data are shown on one map; Proterozoic data are on the other. A sample location map is included for ease of matching specific localities and data in the tables to the maps. Several records in the tables were not included in the maps because either there were ambiguous dates or lack of location precluded accurate plotting.

Geovisualization in the HydroProg web map service

NASA Astrophysics Data System (ADS)

Spallek, Waldemar; Wieczorek, Malgorzata; Szymanowski, Mariusz; Niedzielski, Tomasz; Swierczynska, Malgorzata

2016-04-01

The HydroProg system, built at the University of Wroclaw (Poland) in frame of the research project no. 2011/01/D/ST10/04171 financed by the National Science Centre of Poland, has been designed for computing predictions of river stages in real time on a basis of multimodelling. This experimental system works on the upper Nysa Klodzka basin (SW Poland) above the gauge in the town of Bardo, with the catchment area of 1744 square kilometres. The system operates in association with the Local System for Flood Monitoring of Klodzko County (LSOP), and produces hydrograph prognoses as well as inundation predictions. For presenting the up-to-date predictions and their statistics in the online mode, the dedicated real-time web map service has been designed. Geovisualisation in the HydroProg map service concerns: interactive maps of study area, interactive spaghetti hydrograms of water level forecasts along with observed river stages, animated images of inundation. The LSOP network offers a high spatial and temporal resolution of observations, as the length of the sampling interval is equal to 15 minutes. The main environmental elements related to hydrological modelling are shown on the main map. This includes elevation data (hillshading and hypsometric tints), rivers and reservoirs as well as catchment boundaries. Furthermore, we added main towns, roads as well as political and administrative boundaries for better map understanding. The web map was designed as a multi-scale representation, with levels of detail and zooming according to scales: 1:100 000, 1:250 000 and 1:500 000. Observations of water level in LSOP are shown on interactive hydrographs for each gauge. Additionally, predictions and some of their statistical characteristics (like prediction errors and Nash-Sutcliffe efficiency) are shown for selected gauges. Finally, predictions of inundation are presented on animated maps which have been added for four experimental sites. The HydroProg system is a strictly scientific project, but the web map service has been designed for all web users. The main objective of the paper is to present the design process of the web map service, following the cartographic and graphic principles.

24 CFR 983.3 - PBV definitions.

Code of Federal Regulations, 2010 CFR

2010-04-01

... following criteria: (1) The facility is licensed and regulated as an assisted living facility by the state... selection date. Excepted units (units in a multifamily building not counted against the 25 percent per... selection date and that substantially comply with the HQS on that date. (The units must fully comply with...

STK Integrated Message Production List Editor (SIMPLE) for CEO Operations

NASA Technical Reports Server (NTRS)

Trenchard, Mike; Heydorn, James

2014-01-01

Late in fiscal year 2011, the Crew Earth Observations (CEO) team was tasked to upgrade and replace its mission planning and mission operations software systems, which were developed in the Space Shuttle era of the 1980s and 1990s. The impetuses for this change were the planned transition of all workstations to the Windows 7 64-bit operating system and the desire for more efficient and effective use of Satellite Tool Kit (STK) software required for reliable International Space Station (ISS) Earth location tracking. An additional requirement of this new system was the use of the same SQL database of CEO science sites from the SMMS, which was also being developed. STK Integrated Message Production List Editor (SIMPLE) is the essential, all-in-one tool now used by CEO staff to perform daily ISS mission planning to meet its requirement to acquire astronaut photography of specific sites on Earth. The sites are part of a managed, long-term database that has been defined and developed for scientific, educational, and public interest. SIMPLE's end product is a set of basic time and location data computed for an operator-selected set of targets that the ISS crew will be asked to photograph (photography is typically planned 12 to 36 hours out). The CEO operator uses SIMPLE to (a) specify a payload operations planning period; (b) acquire and validate the best available ephemeris data (vectors) for the ISS during the planning period; (c) ingest and display mission-specific site information from the CEO database; (d) identify and display potential current dynamic event targets as map features; (e) compute and display time and location information for each target; (f) screen and select targets based on known crew availability constraints, obliquity constraints, and real-time evaluated constraints to target visibility due to illumination (sun elevation) and atmospheric conditions (weather); and finally (g) incorporate basic, computed time and location information for each selected target into the daily CEO Target List product (message) for submission to ISS payload planning and integration teams for their review and approval prior to uplink. SIMPLE requires and uses the following resources: an ISS mission planning period Greenwich Mean Time start date/time and end date/time), the best available ISS mission ephemeris data (vectors) for that planning period, the STK software package configured for the ISS, and an ISS mission-specific subset of the CEO sites database. The primary advantages realized by the development and implementation of SIMPLE into the CEO payload operations support activity are a smooth transition to the Windows 7 operating system upon scheduled workstation refresh; streamlining of the input and verification of the current ISS ephemeris (vector data); seamless incorporation of selected contents of the SQL database of science sites; the ability to tag and display potential dynamic event opportunities on orbit track maps; simplification of the display and selection of encountered sites based on crew availability, illumination, obliquity, and weather constraints; the incorporation of high-quality mapping of the Earth with various satellite-based datasets for use in describing targets; and the ability to encapsulate and export the essential selected target elements in XML format for use by onboard Earth-location systems, such as Worldmap. SIMPLE is a carefully designed and crafted in-house software package that includes detailed help files for the user and meticulous internal documentation for future modifications. It was delivered in February 2012 for test and evaluation. Following acceptance, it was implemented for CEO mission operations support in May 2012.

Multi-Sensor Characterization of the Boreal Forest: Initial Findings

NASA Technical Reports Server (NTRS)

Reith, Ernest; Roberts, Dar A.; Prentiss, Dylan

2001-01-01

Results are presented in an initial apriori knowledge approach toward using complementary multi-sensor multi-temporal imagery in characterizing vegetated landscapes over a site in the Boreal Ecosystem-Atmosphere Study (BOREAS). Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Airborne Synthetic Aperture Radar (AIRSAR) data were segmented using multiple endmember spectral mixture analysis and binary decision tree approaches. Individual date/sensor land cover maps had overall accuracies between 55.0% - 69.8%. The best eight land cover layers from all dates and sensors correctly characterized 79.3% of the cover types. An overlay approach was used to create a final land cover map. An overall accuracy of 71.3% was achieved in this multi-sensor approach, a 1.5% improvement over our most accurate single scene technique, but 8% less than the original input. Black spruce was evaluated to be particularly undermapped in the final map possibly because it was also contained within jack pine and muskeg land coverages.

DTM-based automatic mapping and fractal clustering of putative mud volcanoes in Arabia Terra craters

NASA Astrophysics Data System (ADS)

Pozzobon, R. P.; Mazzarini, F. M.; Massironi, M. M.; Cremonese, G. C.; Rossi, A. P. R.; Pondrelli, M. P.; Marinangeli, L. M.

2017-09-01

Arabia Terra is a region of Mars where occurrence of past-water manifests at surface and subsurface. To date, several landforms associated with this activity were recognized and mapped, directly influencing the models of fluid circulation. In particular, within several craters such as Firsoff and an unnamed southern crater, putative mud volcanoes were described by several authors. In fact, numerous mounds (from 30 m of diameter in the case of monogenic cones, up to 3-400 m in the case of coalescing mounds) present an apical vent-like depression, resembling subaerial Azerbaijan mud volcanoes and gryphons. To this date, landform analysis through topographic position index and curvatures based on topography was never attempted. We hereby present a landform classification method suitable for mounds automatic mapping. Their resulting spatial distribution is then studied in terms of self-similar clustering.

Land-Cover Trends of the Sierra Nevada Ecoregion, 1973-2000

USGS Publications Warehouse

Raumann, Christian G.; Soulard, Christopher E.

2007-01-01

The U.S. Geological Survey has developed and is implementing the Land Cover Trends project to estimate and describe the temporal and spatial distribution and variability of contemporary land-use and land-cover change in the United States. As part of the Land Cover Trends project, the purpose of this study was to assess land-use/land-cover change in the Sierra Nevada ecoregion for the period 1973 to 2000 using a probability sampling technique and satellite imagery. We randomly selected 36 100-km2 sample blocks to derive thematic images of land-use/land-cover for five dates of Landsat imagery (1973, 1980, 1986, 1992, 2000). We visually interpreted as many as 11 land-use/land-cover classes using a 60-meter minimum mapping unit from the five dates of imagery yielding four periods for analysis. Change-detection results from post-classification comparison of our mapped data showed that landscape disturbance from fire was the dominant change from 1973-2000. The second most-common change was forest disturbance resulting from harvest of timber resources by way of clear-cutting. The rates of forest regeneration from temporary fire and harvest disturbances coincided with the rates of disturbance from the previous period. Relatively minor landscape changes were caused by new development and reservoir drawdown. Multiple linear regression analysis suggests that land ownership and the proportion of forest and developed cover types were significant determinants of the likelihood of direct human-induced change occurring in sampling units. Driving forces of change include land ownership, land management such as fire suppression policy, and demand for natural resources.

Natural selection and genetic variation for reproductive reaction norms in a wild bird population.

PubMed

Brommer, Jon E; Merilä, Juha; Sheldon, Ben C; Gustafsson, Lars

2005-06-01

Many morphological and life-history traits show phenotypic plasticity that can be described by reaction norms, but few studies have attempted individual-level analyses of reaction norms in the wild. We analyzed variation in individual reaction norms between laying date and three climatic variables (local temperature, local rainfall, and North Atlantic Oscillation) of 1126 female collared flycatchers (Ficedula albicollis) with a restricted maximum likehood linear mixed model approach using random-effect best linear unbiased predictor estimates for the elevation (i.e., expected laying date in the average environment) and slope (i.e., adjustment in laying date as a function of environment) of females' reaction norms. Variation in laying date was best explained by local temperature, and individual females differed in both the elevation and the slope of their laying date-temperature reaction norms. As revealed by animal model analyses, there was weak evidence for additive genetic variance of elevation (h2 +/- SE = 0.09 +/- 0.09), whereas there was no evidence for heritability of slope (h2 +/- SE = 0.00 +/- 0.01). Selection analysis, using a female's lifetime production of fledglings or recruits as an estimate of her fitness, revealed significant selection for a lower phenotypic value and breeding value for elevation (i.e., earlier laying date at the average temperature). There was selection for steeper phenotypic values of slope (i.e., greater plasticity in the adjustment of laying date to temperature), but no significant selection on the breeding values of slope. Although these results suggest that phenotypic laying date is influenced by additive genetic factors, as well as by an interaction with the environment, selection on plasticity would not produce an evolutionary response.

Willingness to date across race: differences among gay and heterosexual men and women.

PubMed

McIntosh, William D; Scott, Alison J; Dawson, Bryan L; Locker, Lawrence

2011-06-01

Willingness to date members of other races was examined among 200 men with same-sex dating preference (n = 100) and opposite-sex dating preference (n = 100), and 200 women with same-sex dating preference (n = 100) and opposite-sex dating preference (n = 100) who were randomly selected from an Internet dating web site. Overall, results indicated a greater willingness among gay participants than heterosexual participants to date people of other races. A 2 (Sex) x 2 (Sexual Orientation) analysis of variance showed an interaction, with lesbian women more willing to date other races than gay men, while among heterosexual participants men were more willing than women to date other races. The role of mate selection theory, and the importance of the status afforded various races in U.S. society, were applied to interpret people's willingness to date other races.

Can Single Crystal (U-Th)/He Zircon Ages from Nördlinger Ries Suevite be Linked to Impact-Related Shock Effects?

NASA Astrophysics Data System (ADS)

van Soest, M. C.; Cooper, F. J.; Wartho, J.; Hodges, K.; Buchner, E.; Schmieder, M.; Koeberl, C.

2010-12-01

Dating of impact-related material is difficult especially when pristine impact melt is unavailable. In the absence of such melts, most geochronometers in shocked basement or melt-poor impact rocks yield only partially reset or non-reset ages. In such cases, application of the low closure temperature apatite and zircon (U-Th)/He geochronometers can be successful, since impact-related physical and thermal shock should reset the He systematics in both minerals in most materials affected by the impact. For a proof of concept study on the well-studied Ries impact structure, we (U-Th)/He dated apatites (14.08 ± 0.26 Ma 2σ, n = 5) and zircons (14.26 ± 0.31 Ma 2σ, n = 10) from two Aumühle quarry suevite samples and one Polsingen quarry impact melt rock, which was dated at 14.37 ± 0.30 Ma (2σ) using Ar-Ar stepwise heating of recrystallized K-feldspar melt (Buchner et al., 2010). The (U-Th)/He ages agree well with the 14.37 Ma age, but are slightly younger than the suggested age of 14.59 ± 0.20 Ma (2σ - based on recent, post 1995, Ar-Ar data, Buchner et al., 2010) for the impact structure. However, among the 27 zircons dated, 6 were partially reset (>16Ma), and 11 zircons yielded younger dates (<13.5 Ma).The younger dates are problematic for successful (U-Th)/He dating of impact structures of unknown age, as they would be identified incorrectly as the age of the impact event. The cause for these younger dates may be: a) partial He loss due to a post-impact thermal event, which at Ries is unlikely as there is no geological evidence for such an event; b) compromised He retention due to metamictization by progressive radiation damage; or c) compromised He retention due to impact shock-related effects. The latter two causes can produce similar visual effects on zircon and the He loss mechanism is also similar, i.e. changes in the zircon crystal structure on a micro scale. However, the effects of these processes on zircon have been documented extensively by non-destructive analytical methods such as Raman spectroscopy, single crystal XRD, and SEM. These techniques have provided a means to distinguish shock from radiation damage effects, based on the presence of the high pressure zircon polymorph reidite, at shock levels >20 GPa (Wittmann et al., 2006). In order to establish if these effects can be identified in individual zircons before undertaking (U-Th)/He dating, and thus if these analytical methods can be used to pre-select suitable zircons for dating, 30 Ries zircons have been picked, based on euhedral shape and size, from two suevite samples for non-destructive geochemical and crystal structure studies prior to (U-Th)/He dating. Initial results from Raman spectroscopy indicate reidite is present in >80% of the grains, providing clear evidence for shock, while other grains show extensive amorphization likely due to extreme shock or radiation damage. References: Buchner et al. (2010) MAPS 45, 5: 662-674; Wittman et al. (2006) MAPS 41, 3: 433-454.

MAP Markers: Research and Evaluation of the Mutual Agreement Program. Resource Document No. 5.

ERIC Educational Resources Information Center

Robison, James O.

This report is an evaluation, using randomized experimental/control design, of a program involving negotiated contractual agreements (MAP) between prisoners and parole boards for specific parole dates contingent on performance in work, training and treatment activities. Contracts were generally for less than six months. Both feasibility and…

Reusable Ada Software for Command and Control Workstation Map Manipulation

DTIC Science & Technology

1992-06-18

h-.. I.. b 1 .. hm . T.... ~ N -k.L A..-bt ... ~ 4.g -np ft. Figure 15. The Main Display Storyboard (final iteration) are other panels not shown which...Defense, October 1988. 18. Defense Mapping Agency, Products Catalog, Digitizing The Future, 3d ed., Department of Defense, No Date. 183 19. Deitel , H

Construct Maps for the Road Ahead

ERIC Educational Resources Information Center

Bunch, Michael B.

2013-01-01

In this issue of "Measurement: Interdisciplinary Research and Perspectives," Adam E. Wyse provides a thorough review of research to date on the use of construct maps in standard setting. He juxtaposes concepts and methods in ways that make their connections to one another clearer and more obvious than they might otherwise have been. In…

41 CFR Appendix E to Chapter 301 - Suggested Guidance for Conference Planning

Code of Federal Regulations, 2014 CFR

2014-07-01

... logistics, e.g., schedule, exhibits, speaker. • Making suggestions as to who should attend. • Serving as... date. • Detailed area map and driving instructions. • Information on traffic patterns to avoid rush... designated smoking areas. • Special events. • Message center information. • Area map. • Other pertinent...

28. MAP SHOWING LOCATION OF ARVFS FACILITY AS BUILT. SHOWS ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

28. MAP SHOWING LOCATION OF ARVFS FACILITY AS BUILT. SHOWS LINCOLN BOULEVARD, BIG LOST RIVER, AND NAVAL REACTORS FACILITY. F.C. TORKELSON DRAWING NUMBER 842-ARVFS-101-2. DATED OCTOBER 12, 1965. INEL INDEX CODE NUMBER: 075 0101 851 151969. - Idaho National Engineering Laboratory, Advanced Reentry Vehicle Fusing System, Scoville, Butte County, ID

78 FR 37651 - Agency Information Collection Activities: Request for Comments for a New Information Collection

Federal Register 2010, 2011, 2012, 2013, 2014

2013-06-21

...- 493-3064, Nondestructive Evaluation Research Program, Federal Highway Administration, Department of... date of enactment of MAP-21. Additionally, MAP-21 included a requirement for a study on the benefits... NHS. The goal of this project shall be to complete a study of the benefits, cost- effectiveness, and...

43 CFR 3582.2-1 - Boundary maps.

Code of Federal Regulations, 2013 CFR

2013-10-01

... Recreation Area,” numbered GLC—91,006, dated August 1972. [51 FR 15213, Apr. 22, 1986; 51 FR 25204, July 11..., DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL LEASING AREAS National Park Service Areas § 3582.2-1 Boundary maps. The areas subject to the regulations in this subpart are those areas of lands...

43 CFR 3582.2-1 - Boundary maps.

Code of Federal Regulations, 2011 CFR

2011-10-01

... Recreation Area,” numbered GLC—91,006, dated August 1972. [51 FR 15213, Apr. 22, 1986; 51 FR 25204, July 11..., DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL LEASING AREAS National Park Service Areas § 3582.2-1 Boundary maps. The areas subject to the regulations in this subpart are those areas of lands...

43 CFR 3582.2-1 - Boundary maps.

Code of Federal Regulations, 2012 CFR

2012-10-01

... Recreation Area,” numbered GLC—91,006, dated August 1972. [51 FR 15213, Apr. 22, 1986; 51 FR 25204, July 11..., DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL LEASING AREAS National Park Service Areas § 3582.2-1 Boundary maps. The areas subject to the regulations in this subpart are those areas of lands...

43 CFR 3582.2-1 - Boundary maps.

Code of Federal Regulations, 2014 CFR

2014-10-01

... Recreation Area,” numbered GLC—91,006, dated August 1972. [51 FR 15213, Apr. 22, 1986; 51 FR 25204, July 11..., DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) SPECIAL LEASING AREAS National Park Service Areas § 3582.2-1 Boundary maps. The areas subject to the regulations in this subpart are those areas of lands...

Publications - RI 2000-1C | Alaska Division of Geological & Geophysical

Science.gov Websites

Sagavanirktok B-1 Quadrangle, eastern North Slope, Alaska Authors: Pinney, D.S. Publication Date: 2000 Publisher Bibliographic Reference Pinney, D.S., 2000, Reconnaissance surficial-geologic map of the Sagavanirktok B-1 Sheets Sheet 1 Reconnaissance surficial-geologic map of the Sagavanirktok B-1 Quadrangle, eastern North

High hunting pressure selects for earlier birth date: Wild boar as a case study

USGS Publications Warehouse

Gamelon, M.; Besnard, A.; Gaillard, J.-M.; Servanty, S.; Baubet, E.; Brandt, S.; Gimenez, O.

2011-01-01

Exploitation by humans affects the size and structure of populations. This has evolutionary and demographic consequences that have typically being studied independent of one another. We here applied a framework recently developed applying quantitative tools from population ecology and selection gradient analysis to quantify the selection on a quantitative trait-birth date-through its association with multiple fitness components. From the long-term monitoring (22 years) of a wild boar (Sus scrofa scrofa) population subject to markedly increasing hunting pressure, we found that birth dates have advanced by up to 12 days throughout the study period. During the period of low hunting pressure, there was no detectable selection. However, during the period of high hunting pressure, the selection gradient linking breeding probability in the first year of life to birth date was negative, supporting current life-history theory predicting selection for early births to reproduce within the first year of life with increasing adult mortality. ?? 2011 The Author(s). Evolution?? 2011 The Society for the Study of Evolution..

Mapping Crop Yield and Sow Date Using High Resolution Imagery

NASA Astrophysics Data System (ADS)

Royal, K.

2015-12-01

Keitasha Royal, Meha Jain, Ph.D., David Lobell, Ph.D Mapping Crop Yield and Sow Date Using High Resolution ImageryThe use of satellite imagery in agriculture is becoming increasingly more significant and valuable. Due to the emergence of new satellites, such as Skybox, these satellites provide higher resolution imagery (e.g 1m) therefore improving the ability to map smallholder agriculture. For the smallholder farm dominated area of northern India, Skybox high-resolution satellite imagery can aid in understanding how to improve farm yields. In particular, we are interested in mapping winter wheat in India, as this region produces approximately 80% of the country's wheat crop, which is important given that wheat is a staple crop that provides approximately 20% of household calories. In northeast India, the combination of increased heat stress, limited irrigation access, and the difficulty for farmers to access advanced farming technologies results in farmers only producing about 50% of their potential crop yield. The use of satellite imagery can aid in understanding wheat yields through time and help identify ways to increase crop yields in the wheat belt of India. To translate Skybox satellite data into meaningful information about wheat fields, we examine vegetation indices, such as the normalized difference vegetation index (NDVI), to measure the "greenness" of plants to help determine the health of the crops. We test our ability to predict crop characteristics, like sow date and yield, using vegetation indices of 59 fields for which we have field data in Bihar, India.

National Atlas of the United States Maps

USGS Publications Warehouse

,

2001-01-01

The "National Atlas of the United States of America®", published by the U.S. Geological Survey (USGS) in 1970, is out of print, but many of its maps can be purchased separately. Maps that span facing pages in the atlas are printed on one sheet. Maps dated after 1970 and before 1997 are either revisions of original atlas maps or new maps published in the original atlas format. The USGS and its partners in government and industry began work on a new "National Atlas" in 1997. Though most new atlas products are designed for the World Wide Web, we are continuing our tradition of printing high-quality maps of America. In 1998, the first completely redesigned maps of the "National Atlas of the United States®" were published.

Analysing Relationships Between Urban Land Use Fragmentation Metrics and Socio-Economic Variables

NASA Astrophysics Data System (ADS)

Sapena, M.; Ruiz, L. A.; Goerlich, F. J.

2016-06-01

Analysing urban regions is essential for their correct monitoring and planning. This is mainly accounted for the sharp increase of people living in urban areas, and consequently, the need to manage them. At the same time there has been a rise in the use of spatial and statistical datasets, such as the Urban Atlas, which offers high-resolution urban land use maps obtained from satellite imagery, and the Urban Audit, which provides statistics of European cities and their surroundings. In this study, we analyse the relations between urban fragmentation metrics derived from Land Use and Land Cover (LULC) data from the Urban Atlas dataset, and socio-economic data from the Urban Audit for the reference years 2006 and 2012. We conducted the analysis on a sample of sixty-eight Functional Urban Areas (FUAs). One-date and two-date based fragmentation indices were computed for each FUA, land use class and date. Correlation tests and principal component analysis were then applied to select the most representative indices. Finally, multiple regression models were tested to explore the prediction of socio-economic variables, using different combinations of land use metrics as explanatory variables, both at a given date and in a dynamic context. The outcomes show that demography, living conditions, labour, and transportation variables have a clear relation with the morphology of the FUAs. This methodology allows us to compare European FUAs in terms of the spatial distribution of the land use classes, their complexity, and their structural changes, as well as to preview and model different growth patterns and socio-economic indicators.

Mapping lichen color-groups in western Arctic Alaska using seasonal Landsat composites

NASA Astrophysics Data System (ADS)

Nelson, P.; Macander, M. J.; Swingley, C. S.

2016-12-01

Mapping lichens at a landscape scale has received increased recent interest due to fears that terricolous lichen mats, primary winter caribou forage, may be decreasing across the arctic and boreal zones. However, previous efforts have produced taxonomically coarse, total lichen cover maps or have covered relatively small spatial extents. Here we attempt to map lichens of differing colors as species proxies across northwestern Alaska to produce the finest taxonomic and spatial- grained lichen maps covering the largest spatial extent to date. Lichen community sampling in five western Alaskan National Parks and Preserves from 2007-2012 generated 328 FIA-style 34.7 m radius plots on which species-level macrolichen community structure and abundance was estimated. Species were coded by color and plot lichen cover was aggregated by plot as the sum of the cover of each species in a color group. Ten different lichen color groupings were used for modeling to deduce which colors were most detectable. Reflectance signatures of each plot were extracted from a series of Landsat composites (circa 2000-2010) partitioned into two-week intervals from June 1 to Sept. 15. Median reflectance values for each band in each pixel were selected based on filtering criteria to reduce likelihood of snow cover. Lichen color group cover was regressed against plot reflectance plus additional abiotic predictors in two different data mining algorithms. Brown and grey lichens had the best models explaining approximately 40% of lichen cover in those color groups. Both data mining techniques produced similarly good fitting models. Spatial patterns of lichen color-group cover show distinctly different ecological patterns of these color-group species proxies.

Dynamic Digital Maps as Vehicles for Distributing Digital Geologic Maps and Embedded Analytical Data and Multimedia

NASA Astrophysics Data System (ADS)

Condit, C. D.; Mninch, M.

2012-12-01

The Dynamic Digital Map (DDM) is an ideal vehicle for the professional geologist to use to describe the geologic setting of key sites to the public in a format that integrates and presents maps and associated analytical data and multimedia without the need for an ArcGIS interface. Maps with field trip guide stops that include photographs, movies and figures and animations, showing, for example, how the features seen in the field formed, or how data might be best visualized in "time-frame" sequences are ideally included in DDMs. DDMs distribute geologic maps, images, movies, analytical data, and text such as field guides, in an integrated cross-platform, web enabled format that are intuitive to use, easily and quickly searchable, and require no additional proprietary software to operate. Maps, photos, movies and animations are stored outside the program, which acts as an organizational framework and index to present these data. Once created, the DDM can be downloaded from the web site hosting it in the flavor matching the user's operating system (e.g. Linux, Windows and Macintosh) as zip, dmg or tar files (and soon as iOS and Android tablet apps). When decompressed, the DDM can then access its associated data directly from that site with no browser needed. Alternatively, the entire package can be distributed and used from CD, DVD, or flash-memory storage. The intent of this presentation is to introduce the variety of geology that can be accessed from the over 25 DDMs created to date, concentrating on the DDM of the Springerville Volcanic Field. We will highlight selected features of some of them, introduce a simplified interface to the original DDM (that we renamed DDMC for Classic) and give a brief look at a the recently (2010-2011) completed geologic maps of the Springerville Volcanic field to see examples of each of the features discussed above, and a display of the integrated analytical data set. We will also highlight the differences between the classic or DDMCs and the new Dynamic Digital Map Extended (DDME) designed from the ground up to take advantage of the expanded connectedness this redesigned program will accommodate.

The Dunhuang Chinese sky: A comprehensive study of the oldest known star atlas

NASA Astrophysics Data System (ADS)

Bonnet-Bidaud, Jean-Marc; Praderie, Françoise; Whitfield, Susan

2009-03-01

This paper presents an analysis of the star atlas included in the medieval Chinese manuscript Or.8210/S.3326 discovered in 1907 by the archaeologist Aurel Stein at the Silk Road town of Dunhuang and now housed in the British Library. Although partially studied by a few Chinese scholars, it has never been fully displayed and discussed in the Western world. This set of sky maps (12 hour-angle maps in quasi-cylindrical projection and a circumpolar map in azimuthal projection), displaying the full sky visible from the Northern Hemisphere, is up to now the oldest complete preserved star atlas known from any civilisation. It is also the earliest known pictorial representation of the quasi-totality of Chinese constellations. This paper describes the history of the physical object - a roll of thin paper drawn with ink. We analyse the stellar content of each map (1,339 stars, 257 asterisms) and the texts associated with the maps. We establish the precision with which the maps were drawn (1.5-4° for the brightest stars) and examine the type of projections used. We conclude that precise mathematical methods were used to produce the Atlas. We also discuss the dating of the manuscript and its possible author, and we confirm the date +649-684 (early Tang Dynasty) as most probable based on the available evidence. This is at variance with a prior estimate of around +940. Finally, we present a brief comparison with later sky maps, both from China and Europe.

Open Geoscience Database

NASA Astrophysics Data System (ADS)

Bashev, A.

2012-04-01

Currently there is an enormous amount of various geoscience databases. Unfortunately the only users of the majority of the databases are their elaborators. There are several reasons for that: incompaitability, specificity of tasks and objects and so on. However the main obstacles for wide usage of geoscience databases are complexity for elaborators and complication for users. The complexity of architecture leads to high costs that block the public access. The complication prevents users from understanding when and how to use the database. Only databases, associated with GoogleMaps don't have these drawbacks, but they could be hardly named "geoscience" Nevertheless, open and simple geoscience database is necessary at least for educational purposes (see our abstract for ESSI20/EOS12). We developed a database and web interface to work with them and now it is accessible at maps.sch192.ru. In this database a result is a value of a parameter (no matter which) in a station with a certain position, associated with metadata: the date when the result was obtained; the type of a station (lake, soil etc); the contributor that sent the result. Each contributor has its own profile, that allows to estimate the reliability of the data. The results can be represented on GoogleMaps space image as a point in a certain position, coloured according to the value of the parameter. There are default colour scales and each registered user can create the own scale. The results can be also extracted in *.csv file. For both types of representation one could select the data by date, object type, parameter type, area and contributor. The data are uploaded in *.csv format: Name of the station; Lattitude(dd.dddddd); Longitude(ddd.dddddd); Station type; Parameter type; Parameter value; Date(yyyy-mm-dd). The contributor is recognised while entering. This is the minimal set of features that is required to connect a value of a parameter with a position and see the results. All the complicated data treatment could be conducted in other programs after extraction the filtered data into *.csv file. It makes the database understandable for non-experts. The database employs open data format (*.csv) and wide spread tools: PHP as the program language, MySQL as database management system, JavaScript for interaction with GoogleMaps and JQueryUI for create user interface. The database is multilingual: there are association tables, which connect with elements of the database. In total the development required about 150 hours. The database still has several problems. The main problem is the reliability of the data. Actually it needs an expert system for estimation the reliability, but the elaboration of such a system would take more resources than the database itself. The second problem is the problem of stream selection - how to select the stations that are connected with each other (for example, belong to one water stream) and indicate their sequence. Currently the interface is English and Russian. However it can be easily translated to your language. But some problems we decided. For example problem "the problem of the same station" (sometimes the distance between stations is smaller, than the error of position): when you adding new station to the database our application automatically find station near this place. Also we decided problem of object and parameter type (how to regard "EC" and "electrical conductivity" as the same parameter). This problem has been solved using "associative tables". If you would like to see the interface on your language, just contact us. We should send you the list of terms and phrases for translation on your language. The main advantage of the database is that it is totally open: everybody can see, extract the data from the database and use them for non-commercial purposes with no charge. Registered users can contribute to the database without getting paid. We hope, that it will be widely used first of all for education purposes, but professional scientists could use it also.

Natural selection and inheritance of breeding time and clutch size in the collared flycatcher.

PubMed

Sheldon, B C; Kruuk, L E B; Merilä, J

2003-02-01

Many characteristics of organisms in free-living populations appear to be under directional selection, possess additive genetic variance, and yet show no evolutionary response to selection. Avian breeding time and clutch size are often-cited examples of such characters. We report analyses of inheritance of, and selection on, these traits in a long-term study of a wild population of the collared flycatcher Ficedula albicollis. We used mixed model analysis with REML estimation ("animal models") to make full use of the information in complex multigenerational pedigrees. Heritability of laying date, but not clutch size, was lower than that estimated previously using parent-offspring regressions, although for both traits there was evidence of substantial additive genetic variance (h2 = 0.19 and 0.29, respectively). Laying date and clutch size were negatively genetically correlated (rA = -0.41 +/- 0.09), implying that selection on one of the traits would cause a correlated response in the other, but there was little evidence to suggest that evolution of either trait would be constrained by correlations with other phenotypic characters. Analysis of selection on these traits in females revealed consistent strong directional fecundity selection for earlier breeding at the level of the phenotype (beta = -0.28 +/- 0.03), but little evidence for stabilising selection on breeding time. We found no evidence that clutch size was independently under selection. Analysis of fecundity selection on breeding values for laying date, estimated from an animal model, indicated that selection acts directly on additive genetic variance underlying breeding time (beta = -0.20 +/- 0.04), but not on clutch size (beta = 0.03 +/- 0.05). In contrast, selection on laying date via adult female survival fluctuated in sign between years, and was opposite in sign for selection on phenotypes (negative) and breeding values (positive). Our data thus suggest that any evolutionary response to selection on laying date is partially constrained by underlying life-history trade-offs, and illustrate the difficulties in using purely phenotypic measures and incomplete fitness estimates to assess evolution of life-history trade-offs. We discuss some of the difficulties associated with understanding the evolution of laying date and clutch size in natural populations.

Understanding the spatial distribution of eroded areas in the former rural homelands of South Africa: Comparative evidence from two new non-commercial multispectral sensors

NASA Astrophysics Data System (ADS)

Sepuru, Terrence Koena; Dube, Timothy

2018-07-01

In this study, we determine the most suitable multispectral sensor that can accurately detect and map eroded areas from other land cover types in Sekhukhune rural district, Limpopo Province, South Africa. Specifically, the study tested the ability of multi-date (wet and dry season) Landsat 8 OLI and Sentinel-2 MSI images in detecting and mapping eroded areas. The implementation was done, using a robust non-parametric classification ensemble: Discriminant Analysis (DA). Three sets of analysis were applied (Analysis 1: Spectral bands as independent dataset; Analysis 2: Spectral vegetation indices as independent and Analysis 3: Combined spectral bands and spectral vegetation indices). Overall classification accuracies ranging between 80% to 81.90% for MSI and 75.71%-80.95% for OLI were derived for the wet and dry season, respectively. The integration of spectral bands and spectral vegetation indices showed that Sentinel-2 (OA = 83, 81%), slightly performed better than Landsat 8, with 82, 86%. The use of bands and vegetation indices as independent dataset resulted in slightly weaker results for both sensors. Sentinel-2 MSI bands located in the NIR (0.785-0.900 μm), red edge (0.698-0.785 μm) and SWIR (1.565-2.280 μm) regions were selected as the most optimal for discriminating degraded soils from other land cover types. However, for Landsat 8OLI, only the SWIR (1.560-2.300 μm), NIR (0.845-0.885 μm) region were selected as the best regions. Of the eighteen spectral vegetation indices computed, NDVI and SAVI and SAVI and Global Environmental Monitoring Index (GEMI) were ranked selected as the most suitable for detecting and mapping soil erosion. Additionally, SRTM DEM derived information illustrates that for both sensors eroded areas occur on sites that are 600 m and 900 m of altitude with similar trends observed in both dry and wet season maps. Findings of this work emphasize the importance of free and readily available new generation sensors in continuous landscape-scale soil erosion monitoring. Besides, such information can help to identify hotspots and potentially vulnerable areas, as well as aid in developing possible control and mitigation measures.

30 CFR 580.12 - What must I include in my application or notification?

Code of Federal Regulations, 2012 CFR

2012-07-01

... permit application form (Form BOEM-0134) at least 30 days before the startup date for activities in the... type, location, purpose, and dates of activity; and environmental and other information. A... type of research and a brief description of how you will conduct it; (4) A map, plat, or chart, that...

30 CFR 580.12 - What must I include in my application or notification?

Code of Federal Regulations, 2014 CFR

2014-07-01

... permit application form (Form BOEM-0134) at least 30 days before the startup date for activities in the... type, location, purpose, and dates of activity; and environmental and other information. A... type of research and a brief description of how you will conduct it; (4) A map, plat, or chart, that...

30 CFR 580.12 - What must I include in my application or notification?

Code of Federal Regulations, 2013 CFR

2013-07-01

... permit application form (Form BOEM-0134) at least 30 days before the startup date for activities in the... type, location, purpose, and dates of activity; and environmental and other information. A... type of research and a brief description of how you will conduct it; (4) A map, plat, or chart, that...

The Dating Game: An Exercise Illustrating the Concepts of Homogamy, Heterogamy, Hyperogamy, and Hypogamy.

ERIC Educational Resources Information Center

O'Brien, Eileen; Foley, Lara

1999-01-01

Describes the "Dating Game," an exercise for use in marriage and family courses that enables students to learn about the theories of mate selection by simulating random mating. States that the dating game helps make mate selection concepts relevant to the students' lives. Discusses the students' reaction to the exercise. (CMK)

32 CFR 1624.1 - Random selection procedures for induction.

Code of Federal Regulations, 2010 CFR

2010-07-01

..., during the specified calendar year(s) attain their 18th year of birth. The drawing, commencing with the... date of birth of the registrant that appears on his Selective Service Registration Record on the day... date of birth in all matters pertaining to his relations with the Selective Service System. ...

Data mining of mental health issues of non-bone marrow donor siblings.

PubMed

Takita, Morihito; Tanaka, Yuji; Kodama, Yuko; Murashige, Naoko; Hatanaka, Nobuyo; Kishi, Yukiko; Matsumura, Tomoko; Ohsawa, Yukio; Kami, Masahiro

2011-07-20

Allogenic hematopoietic stem cell transplantation is a curative treatment for patients with advanced hematologic malignancies. However, the long-term mental health issues of siblings who were not selected as donors (non-donor siblings, NDS) in the transplantation have not been well assessed. Data mining is useful in discovering new findings from a large, multidisciplinary data set and the Scenario Map analysis is a novel approach which allows extracting keywords linking different conditions/events from text data of interviews even when the keywords appeared infrequently. The aim of this study is to assess mental health issues on NDSs and to find helpful keywords for the clinical follow-up using a Scenario Map analysis. A 47-year-old woman whose younger sister had undergone allogenic hematopoietic stem cell transplantation 20 years earlier was interviewed as a NDS. The text data from the interview transcriptions was analyzed using Scenario Mapping. Four clusters of words and six keywords were identified. Upon review of the word clusters and keywords, both the subject and researchers noticed that the subject has had mental health issues since the disease onset to date with being a NDS. The issues have been alleviated by her family. This single subject study suggested the advantages of data mining in clinical follow-up for mental health issues of patients and/or their families.

Genetic analysis and fine mapping of LH1 and LH2, a set of complementary genes controlling late heading in rice (Oryza sativa L.)

PubMed Central

Liu, Shuang; Wang, Feng; Gao, Li Jun; Li, Jin Hua; Li, Rong Bai; Gao, Han Liang; Deng, Guo Fu; Yang, Jin Shui; Luo, Xiao Jin

2012-01-01

Heading date in rice (Oryza sativa L.) is a critical agronomic trait with a complex inheritance. To investigate the genetic basis and mechanism of gene interaction in heading date, we conducted genetic analysis on segregation populations derived from crosses among the indica cultivars Bo B, Yuefeng B and Baoxuan 2. A set of dominant complementary genes controlling late heading, designated LH1 and LH2, were detected by molecular marker mapping. Genetic analysis revealed that Baoxuan 2 contains both dominant genes, while Bo B and Yuefeng B each possess either LH1 or LH2. Using larger populations with segregant ratios of 3 : 1, we fine-mapped LH1 to a 63-kb region near the centromere of chromosome 7 flanked by markers RM5436 and RM8034, and LH2 to a 177-kb region on the short arm of chromosome 8 between flanking markers Indel22468-3 and RM25. Some candidate genes were identified through sequencing of Bo B and Yuefeng B in these target regions. Our work provides a solid foundation for further study on gene interaction in heading date and has application in marker-assisted breeding of photosensitive hybrid rice in China. PMID:23341744

Genetic analysis and fine mapping of LH1 and LH2, a set of complementary genes controlling late heading in rice (Oryza sativa L.).

PubMed

Liu, Shuang; Wang, Feng; Gao, Li Jun; Li, Jin Hua; Li, Rong Bai; Gao, Han Liang; Deng, Guo Fu; Yang, Jin Shui; Luo, Xiao Jin

2012-12-01

Heading date in rice (Oryza sativa L.) is a critical agronomic trait with a complex inheritance. To investigate the genetic basis and mechanism of gene interaction in heading date, we conducted genetic analysis on segregation populations derived from crosses among the indica cultivars Bo B, Yuefeng B and Baoxuan 2. A set of dominant complementary genes controlling late heading, designated LH1 and LH2, were detected by molecular marker mapping. Genetic analysis revealed that Baoxuan 2 contains both dominant genes, while Bo B and Yuefeng B each possess either LH1 or LH2. Using larger populations with segregant ratios of 3 : 1, we fine-mapped LH1 to a 63-kb region near the centromere of chromosome 7 flanked by markers RM5436 and RM8034, and LH2 to a 177-kb region on the short arm of chromosome 8 between flanking markers Indel22468-3 and RM25. Some candidate genes were identified through sequencing of Bo B and Yuefeng B in these target regions. Our work provides a solid foundation for further study on gene interaction in heading date and has application in marker-assisted breeding of photosensitive hybrid rice in China.

Fast Mapping in Healthy Young Adults: The Influence of Metamemory

ERIC Educational Resources Information Center

Ramachandra, Vijayachandra; Rickenbach, Bryna; Ruda, Marissa; LeCureux, Bethanie; Pope, Moira

2010-01-01

Several research studies suggest the significant role played by metamemory in lexical abilities of both adults and children. To our knowledge, there have been no studies to date that have explored the role of metamemory (Judgments of Learning) in fast mapping of novel words by adults. One hundred and twelve undergraduate students were given tasks…

A Bibliometric Mapping of Open Educational Resources

ERIC Educational Resources Information Center

Zancanaro, Airton; Todesco, José Leomar; Ramos, Fernando

2015-01-01

Open educational resources (OER) is a topic that has aroused increasing interest by researchers as a powerful contribution to improve the educational system quality and openness, both in face to face and distance education. The goal of this research is to map publications related to OER, dating from 2002 to 2013, and available through the Web of…

76 FR 56215 - John H. Chafee Coastal Barrier Resources System; Baldwin and Mobile Counties, AL; Availability of...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-09-12

... aquatic habitat. These areas are depicted on a series of maps entitled ``John H. Chafee Coastal Barrier...] John H. Chafee Coastal Barrier Resources System; Baldwin and Mobile Counties, AL; Availability of Draft... availability of a John H. Chafee Coastal Barrier Resources System (CBRS) draft revised map, dated September 22...

78 FR 56650 - Boundary Description and Final Map for Sandy Wild and Scenic River, Upper Portion, Mount Hood...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-09-13

... DEPARTMENT OF AGRICULTURE Forest Service Boundary Description and Final Map for Sandy Wild and...: Notice of availability. SUMMARY: In accordance with section 3(b) of the Wild and Scenic Rivers Act, the... Sandy Wild and Scenic River, Upper Portion, to Congress. DATES: The boundaries and classification of the...

Development and Characterization of Novel SSR Markers in Carrot (Daucus Carota L.) and Their Application for Mapping and Diversity Analysis in Apiaceae

USDA-ARS?s Scientific Manuscript database

Genomic resources in carrot and other Apiaceae are relatively underdeveloped. The availability of a large set of pcr-based codominant markers, such as simple sequence repeats (SSR), would allow integration of the different carrot genetic maps constructed to date (mainly using anonymous dominant mark...

106. Air defense command "master plan", base map," RCA Service ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

106. Air defense command "master plan", base map," RCA Service Company tab no. F-1, sheet 1 of 2, dated 22 October, 1965. - Clear Air Force Station, Ballistic Missile Early Warning System Site II, One mile west of mile marker 293.5 on Parks Highway, 5 miles southwest of Anderson, Anderson, Denali Borough, AK

Fine mapping and identification of candidate genes for a QTL affecting Meloidogyne incognita reproduction in Upland cotton

USDA-ARS?s Scientific Manuscript database

The resistant line Auburn 623RNR and a number of elite breeding lines derived from it remain the most important source of root-knot nematode (RKN) resistance because they exhibit the highest level of resistance to RKN known to date in Upland cotton (Gossypium hirsutum L). Prior genetic mapping analy...

A major QTL corresponding to the Rk locus for resistance to root-knot nematodes in cowpea (Vigna unguiculata L. Walp.).

PubMed

Huynh, Bao-Lam; Matthews, William C; Ehlers, Jeffrey D; Lucas, Mitchell R; Santos, Jansen R P; Ndeve, Arsenio; Close, Timothy J; Roberts, Philip A

2016-01-01

Genome resolution of a major QTL associated with the Rk locus in cowpea for resistance to root-knot nematodes has significance for plant breeding programs and R gene characterization. Cowpea (Vigna unguiculata L. Walp.) is a susceptible host of root-knot nematodes (Meloidogyne spp.) (RKN), major plant-parasitic pests in global agriculture. To date, breeding for host resistance in cowpea has relied on phenotypic selection which requires time-consuming and expensive controlled infection assays. To facilitate marker-based selection, we aimed to identify and map quantitative trait loci (QTL) conferring the resistance trait. One recombinant inbred line (RIL) and two F2:3 populations, each derived from a cross between a susceptible and a resistant parent, were genotyped with genome-wide single nucleotide polymorphism (SNP) markers. The populations were screened in the field for root-galling symptoms and/or under growth-chamber conditions for nematode reproduction levels using M. incognita and M. javanica biotypes. One major QTL was mapped consistently on linkage group VuLG11 of each population. By genotyping additional cowpea lines and near-isogenic lines derived from conventional backcrossing, we confirmed that the detected QTL co-localized with the genome region associated with the Rk locus for RKN resistance that has been used in conventional breeding for many decades. This chromosomal location defined with flanking markers will be a valuable target in marker-assisted breeding and for positional cloning of genes controlling RKN resistance.

Influence of whitebark pine decline on fall habitat use and movements of grizzly bears in the Greater Yellowstone Ecosystem

USGS Publications Warehouse

Costello, Cecily M.; van Manen, Frank T.; Haroldson, Mark A.; Ebinger, Michael R.; Cain, Steven L.; Gunther, Kerry A.; Bjornlie, Daniel D.

2014-01-01

When abundant, seeds of the high-elevation whitebark pine (WBP; Pinus albicaulis) are an important fall food for grizzly bears (Ursus arctos) in the Greater Yellowstone Ecosystem. Rates of bear mortality and bear/human conflicts have been inversely associated with WBP productivity. Recently, mountain pine beetles (Dendroctonus ponderosae) have killed many cone-producing WBP trees. We used fall (15 August–30 September) Global Positioning System locations from 89 bear years to investigate temporal changes in habitat use and movements during 2000–2011. We calculated Manly–Chesson (MC) indices for selectivity of WBP habitat and secure habitat (≥500 m from roads and human developments), determined dates of WBP use, and documented net daily movement distances and activity radii. To evaluate temporal trends, we used regression, model selection, and candidate model sets consisting of annual WBP production, sex, and year. One-third of sampled grizzly bears had fall ranges with little or no mapped WBP habitat. Most other bears (72%) had a MC index above 0.5, indicating selection for WBP habitats. From 2000 to 2011, mean MC index decreased and median date of WBP use shifted about 1 week later. We detected no trends in movement indices over time. Outside of national parks, there was no correlation between the MC indices for WBP habitat and secure habitat, and most bears (78%) selected for secure habitat. Nonetheless, mean MC index for secure habitat decreased over the study period during years of good WBP productivity. The wide diet breadth and foraging plasticity of grizzly bears likely allowed them to adjust to declining WBP. Bears reduced use of WBP stands without increasing movement rates, suggesting they obtained alternative fall foods within their local surroundings. However, the reduction in mortality risk historically associated with use of secure, high-elevation WBP habitat may be diminishing for bears residing in multiple-use areas.

Influence of whitebark pine decline on fall habitat use and movements of grizzly bears in the Greater Yellowstone Ecosystem

PubMed Central

Costello, Cecily M; van Manen, Frank T; Haroldson, Mark A; Ebinger, Michael R; Cain, Steven L; Gunther, Kerry A; Bjornlie, Daniel D

2014-01-01

When abundant, seeds of the high-elevation whitebark pine (WBP; Pinus albicaulis) are an important fall food for grizzly bears (Ursus arctos) in the Greater Yellowstone Ecosystem. Rates of bear mortality and bear/human conflicts have been inversely associated with WBP productivity. Recently, mountain pine beetles (Dendroctonus ponderosae) have killed many cone-producing WBP trees. We used fall (15 August–30 September) Global Positioning System locations from 89 bear years to investigate temporal changes in habitat use and movements during 2000–2011. We calculated Manly–Chesson (MC) indices for selectivity of WBP habitat and secure habitat (≥500 m from roads and human developments), determined dates of WBP use, and documented net daily movement distances and activity radii. To evaluate temporal trends, we used regression, model selection, and candidate model sets consisting of annual WBP production, sex, and year. One-third of sampled grizzly bears had fall ranges with little or no mapped WBP habitat. Most other bears (72%) had a MC index above 0.5, indicating selection for WBP habitats. From 2000 to 2011, mean MC index decreased and median date of WBP use shifted about 1 week later. We detected no trends in movement indices over time. Outside of national parks, there was no correlation between the MC indices for WBP habitat and secure habitat, and most bears (78%) selected for secure habitat. Nonetheless, mean MC index for secure habitat decreased over the study period during years of good WBP productivity. The wide diet breadth and foraging plasticity of grizzly bears likely allowed them to adjust to declining WBP. Bears reduced use of WBP stands without increasing movement rates, suggesting they obtained alternative fall foods within their local surroundings. However, the reduction in mortality risk historically associated with use of secure, high-elevation WBP habitat may be diminishing for bears residing in multiple-use areas. PMID:24963393

Influence of whitebark pine decline on fall habitat use and movements of grizzly bears in the Greater Yellowstone Ecosystem.

PubMed

Costello, Cecily M; van Manen, Frank T; Haroldson, Mark A; Ebinger, Michael R; Cain, Steven L; Gunther, Kerry A; Bjornlie, Daniel D

2014-05-01

When abundant, seeds of the high-elevation whitebark pine (WBP; Pinus albicaulis) are an important fall food for grizzly bears (Ursus arctos) in the Greater Yellowstone Ecosystem. Rates of bear mortality and bear/human conflicts have been inversely associated with WBP productivity. Recently, mountain pine beetles (Dendroctonus ponderosae) have killed many cone-producing WBP trees. We used fall (15 August-30 September) Global Positioning System locations from 89 bear years to investigate temporal changes in habitat use and movements during 2000-2011. We calculated Manly-Chesson (MC) indices for selectivity of WBP habitat and secure habitat (≥500 m from roads and human developments), determined dates of WBP use, and documented net daily movement distances and activity radii. To evaluate temporal trends, we used regression, model selection, and candidate model sets consisting of annual WBP production, sex, and year. One-third of sampled grizzly bears had fall ranges with little or no mapped WBP habitat. Most other bears (72%) had a MC index above 0.5, indicating selection for WBP habitats. From 2000 to 2011, mean MC index decreased and median date of WBP use shifted about 1 week later. We detected no trends in movement indices over time. Outside of national parks, there was no correlation between the MC indices for WBP habitat and secure habitat, and most bears (78%) selected for secure habitat. Nonetheless, mean MC index for secure habitat decreased over the study period during years of good WBP productivity. The wide diet breadth and foraging plasticity of grizzly bears likely allowed them to adjust to declining WBP. Bears reduced use of WBP stands without increasing movement rates, suggesting they obtained alternative fall foods within their local surroundings. However, the reduction in mortality risk historically associated with use of secure, high-elevation WBP habitat may be diminishing for bears residing in multiple-use areas.

Evaluating methods to detect bark beetle-caused tree mortality using single-date and multi-date Landsat imagery

Treesearch

Arjan J. H. Meddens; Jeffrey A. Hicke; Lee A. Vierling; Andrew T. Hudak

2013-01-01

Bark beetles cause significant tree mortality in coniferous forests across North America. Mapping beetle-caused tree mortality is therefore important for gauging impacts to forest ecosystems and assessing trends. Remote sensing offers the potential for accurate, repeatable estimates of tree mortality in outbreak areas. With the advancement of multi-temporal disturbance...

A map of single nucleotide polymorphisms of the date palm (Phoenix dactylifera) based on whole genome sequencing of 62 varieties

USDA-ARS?s Scientific Manuscript database

Date palm is one of the few crop species that thrive in arid environments and are the most significant fruit crop in the Middle East and North Africa, but lacks genomic resources that can accelerate breeding efforts. Here, we present the first comprehensive catalogue of ~12 million common single nuc...

Can a Forest/Nonforest Change Map Improve the Precision of Forest Area, Volume, Growth, Removals, and Mortality Estimates?

Treesearch

Dale D. Gormanson; Mark H. Hansen; Ronald E. McRoberts

2005-01-01

In an extensive forest inventory, stratifications that use dual-date forest/nonforest classifications of Landsat Thematic Mapper data approximately 10 years apart are tested against similar classifications that use data from only one date. Alternative stratifications that further define edge strata as pixels adjacent to a forest/nonforest boundary are included in the...

Reconstructing spatial and temporal patterns of paleoglaciation along the Tian Shan

NASA Astrophysics Data System (ADS)

Harbor, J.; Stroeven, A. P.; Beel, C.; Blomdin, R.; Caffee, M. W.; Chen, Y.; Codilean, A.; Gribenski, N.; Hattestrand, C.; Heyman, J.; Ivanov, M.; Kassab, C.; Li, Y.; Lifton, N. A.; Liu, G.; Petrakov, D.; Rogozhina, I.; Usubaliev, R.

2012-12-01

Testing and calibrating global climate models require well-constrained information on past climates of key regions around the world. Particularly important are transitional regions that provide a sensitive record of past climate change. Central Asia is an extreme continental location with glaciers and rivers that respond sensitively to temporal variations in the dominance of several major climate systems. As an international team initiative, we are reconstructing the glacial history of the Kyrgyz and Chinese Tian Shan, based on mapping and dating of key localities along the range. Remote-sensing-based geomorphological mapping, building on previous maps produced by Kyrgyz, Russian, Chinese and German scholars, is being augmented with field observations of glacial geomorphology and the maximum distribution of erratics. We are using cosmogenic nuclide (CN) 10Be dating of moraines and other landforms that constrain the former maximum extents of glaciers. Study sites include the Ala-Archa, Ak-Shyrak and Inylchek/Sary-Dzaz areas in Kyrgyzstan and the Urumqi valley (as well as its upland and southern slopes), and the Tumur and Bogeda peak areas in China. Comparing consistently dated glacial histories along and across the range will allow us to examine potential shifts in the dominance patterns of climate systems over time in Central Asia. We are also comparing ages based on CN with optically stimulated luminescence (OSL) and electron spin resonance (ESR) dates. The final stage of this project will use intermediate complexity glacier flow models to examine paleoclimatic implications of the observed spatial and temporal patterns of glacier changes across Central Asia and eastern Tibet, focused in particular on the last glacial cycle.

A compilation of K-Ar-ages for southern California

USGS Publications Warehouse

Miller, Fred K.; Morton, Douglas M.; Morton, Janet L.; Miller, David M.

2014-01-01

The purpose of this report is to make available a large body of conventional K-Ar ages for granitic, volcanic, and metamorphic rocks collected in southern California. Although one interpretive map is included, the report consists primarily of a systematic listing, without discussion or interpretation, of published and unpublished ages that may be of value in future regional and other geologic studies. From 1973 to 1979, 468 rock samples from southern California were collected for conventional K-Ar dating under a regional geologic mapping project of Southern California (predecessor of the Southern California Areal Mapping Project). Most samples were collected and dated between 1974 and 1977. For 61 samples (13 percent of those collected), either they were discarded for varying reasons, or the original collection data were lost. For the remaining samples, 518 conventional K-Ar ages are reported here; coexisting mineral pairs were dated from many samples. Of these K-Ar ages, 225 are previously unpublished, and identified as such in table 1. All K-Ar ages are by conventional K-Ar analysis; no 40Ar/39Ar dating was done. Subsequent to the rock samples collected in the 1970s and reported here, 33 samples were collected and 38 conventional K-Ar ages determined under projects directed at (1) characterization of the Mesozoic and Cenozoic igneous rocks in and on both sides of the Transverse Ranges and (2) clarifying the Mesozoic and Cenozoic tectonics of the eastern Mojave Desert. Although previously published (Beckerman et al., 1982), another eight samples and 11 conventional K-Ar ages are included here, because they augment those completed under the previous two projects.

Part 1: The geomorphic evolution of Eastern Margaritifer Sinus, Mars

NASA Technical Reports Server (NTRS)

Grant, John A., III

1987-01-01

Geomorphic mapping, crater counts on selected surfaces, and a detailed study of drainage basins, were used to trace the geologic evolution of Margaritifer Sinus Quandrangle. The oldest dated surface covering these basins evolved during the period of intense bombardment. Since that time four resurfacing events have occurred. The first three were all of regional extent, while the fourth, occurred locally, filling basins. Valley networks, incised in the third event unit, are always buried by the fourth event unit when present. A peak in geomorphic activity occurred from 10,000 to 5000. Events during this period included the formation of Uzboi/Ladon Valles with deposition in Ladon Basin, and the formation of Samara and Parana/Loire Valles in MC19SE. Flow out of Ladon Basin and to a lesser extent Samara and Parana/Loire Valles created etched terrain at their confluence that was synchronous with initiation of Margaritifer and Iani Chaos. The range of dates for the chaos may be due to periodic collapse. The extensive, well integrted nature of Samara and Parana/Loire Valles requires the existence of a long period of favorable climatic conditions to allow their formation. Development of these two systems was probably through sapping processes.

KIDFamMap: a database of kinase-inhibitor-disease family maps for kinase inhibitor selectivity and binding mechanisms

PubMed Central

Chiu, Yi-Yuan; Lin, Chih-Ta; Huang, Jhang-Wei; Hsu, Kai-Cheng; Tseng, Jen-Hu; You, Syuan-Ren; Yang, Jinn-Moon

2013-01-01

Kinases play central roles in signaling pathways and are promising therapeutic targets for many diseases. Designing selective kinase inhibitors is an emergent and challenging task, because kinases share an evolutionary conserved ATP-binding site. KIDFamMap (http://gemdock.life.nctu.edu.tw/KIDFamMap/) is the first database to explore kinase-inhibitor families (KIFs) and kinase-inhibitor-disease (KID) relationships for kinase inhibitor selectivity and mechanisms. This database includes 1208 KIFs, 962 KIDs, 55 603 kinase-inhibitor interactions (KIIs), 35 788 kinase inhibitors, 399 human protein kinases, 339 diseases and 638 disease allelic variants. Here, a KIF can be defined as follows: (i) the kinases in the KIF with significant sequence similarity, (ii) the inhibitors in the KIF with significant topology similarity and (iii) the KIIs in the KIF with significant interaction similarity. The KIIs within a KIF are often conserved on some consensus KIDFamMap anchors, which represent conserved interactions between the kinase subsites and consensus moieties of their inhibitors. Our experimental results reveal that the members of a KIF often possess similar inhibition profiles. The KIDFamMap anchors can reflect kinase conformations types, kinase functions and kinase inhibitor selectivity. We believe that KIDFamMap provides biological insights into kinase inhibitor selectivity and binding mechanisms. PMID:23193279

Geologic interpretation of gravity data from the Date Creek basin and adjacent areas, west-central Arizona

USGS Publications Warehouse

Otton, James K.; Wynn, Jeffrey C.

1978-01-01

A gravity survey of the Date Creek Basin and adjacent areas was conducted in June 1977 to provide information for the interpretation of basin geology. A comparison of facies relations in the locally uraniferous Chapin Wash Formation and the position of the Anderson mine gravity anomaly in the Date Creek Basin suggested that a relationship between gravity lows and the development of thick lacustrine sections in the region might exist. A second-order residual gravity map derived from the complete Bouguer gravity map for the survey area (derived from survey data and pre-existing U.S. Department of Defense data) shows an excellent correspondence between gravity lows and sediment-filled basins and suggests considerable variation in basin-fill thickness. Using the Anderson mine anomaly as a model, gravity data and facies relations suggest that the southeastern flank of the Aguila Valley gravity low and the gravity low at the western end of the Hassayampa Plain are likely areas for finding thick sections of tuffaceous lacustrine rocks.

Spatiotemporal distribution of Holocene populations in North America

PubMed Central

Chaput, Michelle A.; Kriesche, Björn; Betts, Matthew; Martindale, Andrew; Kulik, Rafal; Schmidt, Volker; Gajewski, Konrad

2015-01-01

As the Cordilleran and Laurentide Ice Sheets retreated, North America was colonized by human populations; however, the spatial patterns of subsequent population growth are unclear. Temporal frequency distributions of aggregated radiocarbon (14C) dates are used as a proxy of population size and can be used to track this expansion. The Canadian Archaeological Radiocarbon Database contains more than 35,000 14C dates and is used in this study to map the spatiotemporal demographic changes of Holocene populations in North America at a continental scale for the past 13,000 y. We use the kernel method, which converts the spatial distribution of 14C dates into estimates of population density at 500-y intervals. The resulting maps reveal temporally distinct, dynamic patterns associated with paleodemographic trends that correspond well to genetic, archaeological, and ethnohistoric evidence of human occupation. These results have implications for hypothesizing and testing migration routes into and across North America as well as the relative influence of North American populations on the evolution of the North American ecosystem. PMID:26351683

A Genetic Linkage Map for Cattle

PubMed Central

Bishop, M. D.; Kappes, S. M.; Keele, J. W.; Stone, R. T.; Sunden, SLF.; Hawkins, G. A.; Toldo, S. S.; Fries, R.; Grosz, M. D.; Yoo, J.; Beattie, C. W.

1994-01-01

We report the most extensive physically anchored linkage map for cattle produced to date. Three-hundred thirteen genetic markers ordered in 30 linkage groups, anchored to 24 autosomal chromosomes (n = 29), the X and Y chromosomes, four unanchored syntenic groups and two unassigned linkage groups spanning 2464 cM of the bovine genome are summarized. The map also assigns 19 type I loci to specific chromosomes and/or syntenic groups and four cosmid clones containing informative microsatellites to chromosomes 13, 25 and 29 anchoring syntenic groups U11, U7 and U8, respectively. This map provides the skeletal framework prerequisite to development of a comprehensive genetic map for cattle and analysis of economic trait loci (ETL). PMID:7908653

The Irish Seabed Mapping Programme: INFOMAR - Integrated Mapping Survey for the Sustainable Developments of Ireland's Marine Resources. Progress to Date.

NASA Astrophysics Data System (ADS)

Sacchetti, F.; Benetti, S.; Fitzpatrick, F.

2006-12-01

During the last six years, the Geological Survey of Ireland and the Marine Institute of Ireland worked together on the multimillion Irish National Seabed Survey project with the purpose of mapping the Irish marine territory using a suite of remote sensing equipment, from multibeam to seismic, achieving 87% coverage of the marine zone. Ireland was the first country in the world to carry out an extensive mapping project of their extended Exclusive Economic Zone. The Irish National Seabed Survey is now succeeded by the multiyear INFOMAR Programme. INFOMAR will concentrate initially on mapping twenty-six selected priority bays, three sea areas and the fisheries-protection "Biologically Sensitive Area", and then will complete 100% mapping of the remainder of the EEZ. Designed to incorporate all elements of an integrated mapping programme, the key data acquisition will include hydrography, oceanographic, geological and heritage data. These data sets discharge Ireland's obligations under international treaties to which she is signatory and the uses of these data are vast and multipurpose: from management plans for inshore fishing, aquaculture, coastal protection and engineering works, to environmental impact assessments related to licensing activity and support to the evolving needs of integrated coastal zone management. INFOMAR also includes a data management, exchange and integration programme for the establishment of a National Marine Data Discovery and Exchange Service; providing improved dissemination of information to researchers, policy makers, the public and private sector and the adoption of standard operating procedures in data management to facilitate inter-agency data integration. During the first year of activity, INFOMAR carried out an integrated survey from the national research vessel, the RV Celtic Explorer, acquiring hydrographic, geophysical and groundtruthing data from Bantry and Dunmanus Bays, located off the South West coast of Ireland. Airborne LiDAR (Light Detection And Ranging) and small-vessel mapping surveys have also been carried out, giving detailed bathymetric, topographic and habitat information for the shoaler waters and inshore areas. This presentation will focus both on the general framework and scope of INFOMAR and the initial results and experiences of this year's survey.

Distribution and density of bird species hazardous to aircraft

USGS Publications Warehouse

Robbins, C.S.; Gauthreaux, Sidney A.

1975-01-01

Only in the past 5 years has it become feasible to map the relative abundance of North American birds. Two programs presently under way and a third that is in the experimental phase are making possible the up-to-date mapping of abundance as well as distribution. A fourth program that has been used successfully in Europe and on a small scale in parts of North America yields detailed information on breeding distribution. The Breeding Bird Survey, sponsored by the U.S. Bureau of Sport Fisheries and Wildlife and the Canadian Wildlife Service, involves 2,000 randomly distributed roadside counts that are conducted during the height of the breeding season in all U.S. States and Canadian Provinces. Observations of approximately 1.4 million birds per year are entered on magnetic tape and subsequently used both for statistical analysis of population trends and for computer mapping of distribution and abundance. The National Audubon Society's Christmas Bird Count is conducted in about 1,000 circles, each 15 miles (24 km) in diameter, in the latter half of December. Raw data for past years have been published in voluminous reports, but not in a form for ready analysis. Under a contract between the U.S. Air Force and the U. S. Bureau of Sport Fisheries and Wildlife (in cooperation with the National Audubon Society), preliminary maps showing distribution and abundance of selected species that are potential hazards to aircraft are presently being mapped and prepared for publication. The Winter Bird Survey, which is in its fifth season of experimental study in a limited area in Central Maryland, may ultimately replace the Christmas Bird Count source. This Survey consists of a standardized 8-kilometer (5-mile) route covered uniformly once a year during midwinter. Bird Atlas programs, which map distribution but not abundance, are well established in Europe and are gaining interest in America

Fusiform gyrus face selectivity relates to individual differences in facial recognition ability.

PubMed

Furl, Nicholas; Garrido, Lúcia; Dolan, Raymond J; Driver, Jon; Duchaine, Bradley

2011-07-01

Regions of the occipital and temporal lobes, including a region in the fusiform gyrus (FG), have been proposed to constitute a "core" visual representation system for faces, in part because they show face selectivity and face repetition suppression. But recent fMRI studies of developmental prosopagnosics (DPs) raise questions about whether these measures relate to face processing skills. Although DPs manifest deficient face processing, most studies to date have not shown unequivocal reductions of functional responses in the proposed core regions. We scanned 15 DPs and 15 non-DP control participants with fMRI while employing factor analysis to derive behavioral components related to face identification or other processes. Repetition suppression specific to facial identities in FG or to expression in FG and STS did not show compelling relationships with face identification ability. However, we identified robust relationships between face selectivity and face identification ability in FG across our sample for several convergent measures, including voxel-wise statistical parametric mapping, peak face selectivity in individually defined "fusiform face areas" (FFAs), and anatomical extents (cluster sizes) of those FFAs. None of these measures showed associations with behavioral expression or object recognition ability. As a group, DPs had reduced face-selective responses in bilateral FFA when compared with non-DPs. Individual DPs were also more likely than non-DPs to lack expected face-selective activity in core regions. These findings associate individual differences in face processing ability with selectivity in core face processing regions. This confirms that face selectivity can provide a valid marker for neural mechanisms that contribute to face identification ability.

Selecting PPE for the Workplace (Personal Protective Equipment for the Eyes and Face)

MedlinePlus

... Additional References Site Map Credits Selecting Personal Protective Equipment (PPE) for the Workplace Impact Heat Chemicals Dust Optical Radiation OSHA Requirements Home | Selecting Personal Protective Equipment (PPE) for the Workplace | OSHA Requirements Site Map | ...

Comparing Selections of Environmental Variables for Ecological Studies: A Focus on Terrain Attributes.

PubMed

Lecours, Vincent; Brown, Craig J; Devillers, Rodolphe; Lucieer, Vanessa L; Edinger, Evan N

2016-01-01

Selecting appropriate environmental variables is a key step in ecology. Terrain attributes (e.g. slope, rugosity) are routinely used as abiotic surrogates of species distribution and to produce habitat maps that can be used in decision-making for conservation or management. Selecting appropriate terrain attributes for ecological studies may be a challenging process that can lead users to select a subjective, potentially sub-optimal combination of attributes for their applications. The objective of this paper is to assess the impacts of subjectively selecting terrain attributes for ecological applications by comparing the performance of different combinations of terrain attributes in the production of habitat maps and species distribution models. Seven different selections of terrain attributes, alone or in combination with other environmental variables, were used to map benthic habitats of German Bank (off Nova Scotia, Canada). 29 maps of potential habitats based on unsupervised classifications of biophysical characteristics of German Bank were produced, and 29 species distribution models of sea scallops were generated using MaxEnt. The performances of the 58 maps were quantified and compared to evaluate the effectiveness of the various combinations of environmental variables. One of the combinations of terrain attributes-recommended in a related study and that includes a measure of relative position, slope, two measures of orientation, topographic mean and a measure of rugosity-yielded better results than the other selections for both methodologies, confirming that they together best describe terrain properties. Important differences in performance (up to 47% in accuracy measurement) and spatial outputs (up to 58% in spatial distribution of habitats) highlighted the importance of carefully selecting variables for ecological applications. This paper demonstrates that making a subjective choice of variables may reduce map accuracy and produce maps that do not adequately represent habitats and species distributions, thus having important implications when these maps are used for decision-making.

Ubiquitin-coated nanodiamonds bind to autophagy receptors for entry into the selective autophagy pathway.

PubMed

Liu, Kuang-Kai; Qiu, Wei-Ru; Naveen Raj, Emmanuel; Liu, Huei-Fang; Huang, Hou-Syun; Lin, Yu-Wei; Chang, Chien-Jen; Chen, Ting-Hua; Chen, Chinpiao; Chang, Huan-Cheng; Hwang, Jenn-Kang; Chao, Jui-I

2017-01-02

Selective macroautophagy/autophagy plays a pivotal role in the processing of foreign pathogens and cellular components to maintain homeostasis in human cells. To date, numerous studies have demonstrated the uptake of nanoparticles by cells, but their intracellular processing through selective autophagy remains unclear. Here we show that carbon-based nanodiamonds (NDs) coated with ubiquitin (Ub) bind to autophagy receptors (SQSTM1 [sequestosome 1], OPTN [optineurin], and CALCOCO2/NDP52 [calcium binding and coiled-coil domain 2]) and are then linked to MAP1LC3/LC3 (microtubule-associated protein 1 light chain 3) for entry into the selective autophagy pathway. NDs are ultimately delivered to lysosomes. Ectopically expressed SQSTM1-green fluorescence protein (GFP) could bind to the Ub-coated NDs. By contrast, the Ub-associated domain mutant of SQSTM1 (ΔUBA)-GFP did not bind to the Ub-coated NDs. Chloroquine, an autophagy inhibitor, prevented the ND-containing autophagosomes from fusing with lysosomes. Furthermore, autophagy receptors OPTN and CALCOCO2/NDP52, involved in the processing of bacteria, were found to be involved in the selective autophagy of NDs. However, ND particles located in the lysosomes of cells did not induce mitotic blockage, senescence, or cell death. Single ND clusters in the lysosomes of cells were observed in the xenografted human lung tumors of nude mice. This study demonstrated for the first time that Ub-coated nanoparticles bind to autophagy receptors for entry into the selective autophagy pathway, facilitating their delivery to lysosomes.

Genetic, metabolite and developmental determinism of fruit friction discolouration in pear.

PubMed

Saeed, Munazza; Brewer, Lester; Johnston, Jason; McGhie, Tony K; Gardiner, Susan E; Heyes, Julian A; Chagné, David

2014-09-16

The unattractive appearance of the surface of pear fruit caused by the postharvest disorder friction discolouration (FD) is responsible for significant consumer dissatisfaction in markets, leading to lower returns to growers. Developing an understanding of the genetic control of FD is essential to enable the full application of genomics-informed breeding for the development of new pear cultivars. Biochemical constituents [phenolic compounds and ascorbic acid (AsA)], polyphenol oxidase (PPO) activity, as well as skin anatomy, have been proposed to play important roles in FD susceptibility in studies on a limited number of cultivars. However, to date there has been no investigation on the biochemical and genetic control of FD, employing segregating populations. In this study, we used 250 seedlings from two segregating populations (POP369 and POP356) derived from interspecific crosses between Asian (Pyrus pyrifolia Nakai and P. bretschneideri Rehd.) and European (P. communis) pears to identify genetic factors associated with susceptibility to FD. Single nucleotide polymorphism (SNP)-based linkage maps suitable for QTL analysis were developed for the parents of both populations. The maps for population POP369 comprised 174 and 265 SNP markers for the male and female parent, respectively, while POP356 maps comprised 353 and 398 SNP markers for the male and female parent, respectively. Phenotypic data for 22 variables were measured over two successive years (2011 and 2012) for POP369 and one year (2011) only for POP356. A total of 221 QTLs were identified that were linked to 22 phenotyped variables, including QTLs associated with FD for both populations that were stable over the successive years. In addition, clear evidence of the influence of developmental factors (fruit maturity) on FD and other variables was also recorded. The QTLs associated with fruit firmness, PPO activity, AsA concentration and concentration of polyphenol compounds as well as FD are the first reported for pear. We conclude that the postharvest disorder FD is controlled by multiple small effect QTLs and that it will be very challenging to apply marker-assisted selection based on these QTLs. However, genomic selection could be employed to select elite genotypes with lower or no susceptibility to FD early in the breeding cycle.

Probabilistic Hazards Outlook

Science.gov Websites

Home Site Map News Organization Search: Go www.nws.noaa.gov Search the CPC Go Download KML Day 3-7 . See static maps below this for the most up to date graphics. Categorical Outlooks Day 3-7 Day 8-14 EDT May 25 2018 Synopsis: The summer season is expected to move in quickly for much of the contiguous

Mapping, Awareness, And Virtualization Network Administrator Training Tool Virtualization Module

DTIC Science & Technology

2016-03-01

AND VIRTUALIZATION NETWORK ADMINISTRATOR TRAINING TOOL VIRTUALIZATION MODULE by Erik W. Berndt March 2016 Thesis Advisor: John Gibson...REPORT TYPE AND DATES COVERED Master’s thesis 4. TITLE AND SUBTITLE MAPPING, AWARENESS, AND VIRTUALIZATION NETWORK ADMINISTRATOR TRAINING TOOL... VIRTUALIZATION MODULE 5. FUNDING NUMBERS 6. AUTHOR(S) Erik W. Berndt 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) Naval Postgraduate School

Differential gene expression in loblolly pine (Pinus taeda L.) challenged with the fusiform rust fungus, Cronartium quercuum f.sp. fusiforme

Treesearch

Henrietta Myburg; Alison M. Morse; Henry V. Amerson; Thomas L. Kubisiak; Dudley Huber; Jason A. Osborne; Saul A. Garcia; C. Dana Nelson; John M. Davis; Sarah F. Covert; Leonel M. van Zyle

2006-01-01

Cronartium quercuum f.sp. fusiforme is the pathogen that incites fusiform rust disease of southern pine species. To date, a number of host resistance genes have been mapped. Although genomic mapping studies have provided valuable information on the genetic basis of disease interactions in this pine-rust pathosystem, the interaction...

Guide to Canadian Aerospace Related Industries,

DTIC Science & Technology

1983-01-01

Research and Development (US). Digital Radar - Contract with Fundacao Educacional Data Processing de Bauru, Brazil. Satellite/Radar - Contract with Canadian... especially suitable for cartography and thematic mapping. The principal applications to date have been to Vehicle Mobility mapping for the Canadian Forces...This latter capability is especially applied to the repair and rebuilding of sawmill and pulpmill machinery, and mining equipment. Ebco is

A proto-architecture for innate directionally selective visual maps.

PubMed

Adams, Samantha V; Harris, Chris M

2014-01-01

Self-organizing artificial neural networks are a popular tool for studying visual system development, in particular the cortical feature maps present in real systems that represent properties such as ocular dominance (OD), orientation-selectivity (OR) and direction selectivity (DS). They are also potentially useful in artificial systems, for example robotics, where the ability to extract and learn features from the environment in an unsupervised way is important. In this computational study we explore a DS map that is already latent in a simple artificial network. This latent selectivity arises purely from the cortical architecture without any explicit coding for DS and prior to any self-organising process facilitated by spontaneous activity or training. We find DS maps with local patchy regions that exhibit features similar to maps derived experimentally and from previous modeling studies. We explore the consequences of changes to the afferent and lateral connectivity to establish the key features of this proto-architecture that support DS.

Developing Depositional Models for Mercury Contaminated Floodplain Deposits Using Geomorphic Mapping and GIS in South River, Virginia

NASA Astrophysics Data System (ADS)

Barbieri, A.; Pizzuto, J.; O'Neal, M. A.; Rhoades, E.

2007-12-01

Mercury was introduced into the South River from the 1930s to the 1950s from an industrial plant in Waynesboro, Virginia. Mercury contamination in fish tissue continues to exceed acceptable levels. The contaminated sediments in the river's floodplains are probably the present source of mercury to the South River ecosystem. Locating and determining the extent and depositional history of these deposits are important for understanding the mercury cycle in the river as well as for remediation plans. The South River is a sinuous, single thread alluvial river with frequent bedrock exposures along its bed and banks. Overbank deposits are discontinuous and thin. Rates of lateral migration by the South River are extremely low, averaging 0.02 m/yr, and the river has been influenced by mill dams along a 19 km study reach. This 19 km section of the 37 km river reach was selected for the study because of its high concentration of Hg. Six different categories of floodplain deposits dating from 1937-2005 have been identified throughout the river using studies of historical aerial photographs in a GIS framework, field mapping, dendro- and radionuclide dating, grain size and Hg analysis. Not surprisingly, traditional depositional models of meandering rivers do not apply. Floodplain depositional units include mill dam deposits, point bar/bench deposits, concave bank bench deposits, islands, cattle deposits, and tributary confluences deposits. The most important deposits for sequestering historic mercury are those that also store the most silt and clay. These include mill dam deposits, point bar/bench deposits, concave bank deposits, and tributary confluence deposits. Many of these deposits represent reservoirs of mercury-contaminated sediments that could supply significant amounts of mercury into the river presently and in the future.

A prototype for automation of land-cover products from Landsat Surface Reflectance Data Records

NASA Astrophysics Data System (ADS)

Rover, J.; Goldhaber, M. B.; Steinwand, D.; Nelson, K.; Coan, M.; Wylie, B. K.; Dahal, D.; Wika, S.; Quenzer, R.

2014-12-01

Landsat data records of surface reflectance provide a three-decade history of land surface processes. Due to the vast number of these archived records, development of innovative approaches for automated data mining and information retrieval were necessary. Recently, we created a prototype utilizing open source software libraries for automatically generating annual Anderson Level 1 land cover maps and information products from data acquired by the Landsat Mission for the years 1984 to 2013. The automated prototype was applied to two target areas in northwestern and east-central North Dakota, USA. The approach required the National Land Cover Database (NLCD) and two user-input target acquisition year-days. The Landsat archive was mined for scenes acquired within a 100-day window surrounding these target dates, and then cloud-free pixels where chosen closest to the specified target acquisition dates. The selected pixels were then composited before completing an unsupervised classification using the NLCD. Pixels unchanged in pairs of the NLCD were used for training decision tree models in an iterative process refined with model confidence measures. The decision tree models were applied to the Landsat composites to generate a yearly land cover map and related information products. Results for the target areas captured changes associated with the recent expansion of oil shale production and agriculture driven by economics and policy, such as the increase in biofuel production and reduction in Conservation Reserve Program. Changes in agriculture, grasslands, and surface water reflect the local hydrological conditions that occurred during the 29-year span. Future enhancements considered for this prototype include a web-based client, ancillary spatial datasets, trends and clustering algorithms, and the forecasting of future land cover.

Seismic hazards in Thailand: a compilation and updated probabilistic analysis

NASA Astrophysics Data System (ADS)

Pailoplee, Santi; Charusiri, Punya

2016-06-01

A probabilistic seismic hazard analysis (PSHA) for Thailand was performed and compared to those of previous works. This PSHA was based upon (1) the most up-to-date paleoseismological data (slip rates), (2) the seismic source zones, (3) the seismicity parameters ( a and b values), and (4) the strong ground-motion attenuation models suggested as being suitable models for Thailand. For the PSHA mapping, both the ground shaking and probability of exceedance (POE) were analyzed and mapped using various methods of presentation. In addition, site-specific PSHAs were demonstrated for ten major provinces within Thailand. For instance, a 2 and 10 % POE in the next 50 years of a 0.1-0.4 g and 0.1-0.2 g ground shaking, respectively, was found for western Thailand, defining this area as the most earthquake-prone region evaluated in Thailand. In a comparison between the ten selected specific provinces within Thailand, the Kanchanaburi and Tak provinces had comparatively high seismic hazards, and therefore, effective mitigation plans for these areas should be made. Although Bangkok was defined as being within a low seismic hazard in this PSHA, a further study of seismic wave amplification due to the soft soil beneath Bangkok is required.

Searching for cluster magnetic fields in the cooling flows of 0745-191, A2029, and A4059

NASA Technical Reports Server (NTRS)

Taylor, Gregory B.; Barton, Elizabeth J.; Ge, Jingping

1994-01-01

We have performed sensitive polarimetric radio observations with the Very Large Array (VLA) of three galaxies: PKS 0745-191, PKS 1508+059, and PKS 2354-350, embedded in x-ray cooling flow clusters. High sensitivity, multifrequency maps of all three, along with spectral index and Faraday rotation measure (RM) maps of PKS 1508+059 and PKS 2354-350 are presented. For PKS 1508+059 and PKS 2354-350 models of the electron density of the intracluster medium (ICM) have been used to set lower limits of 0.1 and 2.7 microG, respectively, on the magnetic field in the ICM based on the observed RMs. In an x-ray selected sample of cooling flow clusters with an associated radio source, 57% (8/14) are found to have absolute RMs in excess of 800 radians/sq m. This sample includes the three sources of this study and all the other high RM sources found to date at zeta less than 0.4. These facts are consistent with the high RM phenomenon being produced by magnetic fields associated with the relatively dense, hot x-ray gas in cooling flow clusters.

Examining a Half Century of Northwestern North American Glacier Behavior

NASA Astrophysics Data System (ADS)

Molnia, B. F.; Fahey, M. J.; Friesen, B.; Josberger, E. G.

2015-12-01

In 1957, as part of the United States' contribution to the International Geophysical Year (IGY), the American Geographical Society (AGS) initiated a multi-institutional mapping project to produce 1:10,000-scale topographic maps of nine northwestern North American glaciers. The project's goal was to prepare precise maps at large scales of selected small glaciers to form a permanent record of the condition of these glaciers so that at a future date they could be resurveyed and compared. Continued surveys would give the history of wastage and accumulation, and more accurate interpretation of the response of these glaciers to meteorological and other factors. The resulting maps and a descriptive summary brochure were published in 1960 by the American Geographical Society. The USGS Global Fiducials Program (GFP) began to systematically image the same nine glaciers approximately half-century after its IGY mapping. The results of the GFP analyses would permit the types of comparisons that were envisioned by the IGY project. Imagery of each of these nine glaciers has been collected from multiple sources, including Next View licensed commercial imagery, vertical and oblique aerial photography, Landsat, and US National Imagery Systems. Exploitation of the imagery has resulted in the production of new 21st century maps that can be compared and contrasted with the vintage AGS map set. Comparison will permit the calculation of a number of parameters which will provide a direct insight into the changes that northwestern North American glaciers have been experiencing during the past half century. Specifically, these comparisons will permit the calculation of changes in glacier length, area, thickness, and volume; computation of rates of glacier advance and/or retreat, rates of glacier thickening and/or thinning, and rates of volume change; production of digital elevation models (DEMs); and generation of velocity fields from crevasse migration. The subsequent re-mapping and comparison to the 1950s maps will provide a unique survey of glacier change across western North America from Alaska to northwestern Washington. Each pair of glacier maps will be accompanied with a summary document describing the changes that have occurred at that glacier. From north to south, the nine IGY glaciers span a distance of more than 2,600 km.

World Map Showing Surface and Subsurface Distribution, and Lithologic Character of Middle and Late Neoproterozoic Rocks

USGS Publications Warehouse

Stewart, John H.

2007-01-01

INTRODUCTION The map was prepared to outline the basic information on where Neoproterozoic rocks are present in the World, and of the lithologic character of these rocks. The information provides a better understanding of major Neoproterozoic tectonic subdivisions useful in paleogeographic and plate tectonic reconstructions. The time frame of the map is within the middle and late Neoproterozoic from approximately 870 to 540 Ma and is after widespread Mesoproterozoic Grenville-age collisional events that are considered to have formed the hypothetical supercontinent of Rodinia. Much of the time represented by the map is interpreted to be during the fragmentation of Rodinia. The recognition of Neoproterozoic rocks is commonly difficult because of limited isotopic or paloeontological dating. Thus, some rocks shown on the map could be older or younger than the age indicated. However, at the scale of the map the the problem may be minor. Enough information seems to be available to indicate the general age of the rocks. Many of the successions contain diamictite deposits considered to be glaciogenic and dated as middle or late Neoproterozoic. These deposits thus show a rough correlation of middle and late Neoproterozoic rocks of the world. The map is a Richardson map projection, except for Antarctica which is a polar projection. The map was prepared from about 650 references, shown in the text linked below under 'Sources of Information', used to outline distribution patterns, determine rock types, and provide information on the regional and local geologic framework of the rocks. The focus of the references is on the geologic information needed to prepare the map. Other information, such as plate tectonic reconstructions or paleomagnetic studies is generally not included. The 'Sources of Information' lists references alphabetically for each of 14 regions. In brackets is a code for each area. These codes provide help in locating the specific regions in the references.

Southwest Exotic Mapping Program 2007: Occurrence summary and maps of select invasive, non-native plants in Arizona

USGS Publications Warehouse

Thomas, Kathryn A.; Guertin, Patricia

2007-01-01

An important aspect of management of invasive, non-native plants (invasive plants) is information on the type, location, and magnitude of infestations. Regional development of this information requires an integrated program of data collection, management, and delivery. The Southwest Exotic Plant Mapping Program (SWEMP), coordinated through the U.S. Geological Survey’s Southwest Biological Science Center, annually compiles occurrence records for infestations of invasive plants. Operating since 1998, the SWEMP team has accepted occurrence records contributed voluntarily by federal, tribal, state, and private collaborators and has compiled these contributions accumulatively with previous versions of SWEMP. The SWEMP 2007 regional database update, SWEMP07, contains 62,000 records for 221 plant species with records dating as far back as 1911 and up to December, 2006. Records include invasive plants in Arizona, eastern California, Colorado, New Mexico, and Utah. SWEMP07 is available through the Southwest Exotic Plant Information Clearinghouse (http://sbsc.wr.usgs.gov/research/projects/swepic/swepic.asp, click SWEMP).Not all invasive plants are non-native and not all invasive plants are even invasive. The Arizona Invasive Species Advisory Council (2006) defined an invasive species as “a species that is (1) non-native to the ecosystem under consideration and, (2) whose introduction causes or is likely to cause economic or environmental harm, or harm to human health”. SWEMP uses the U.S. Department of Agriculture PLANTS database (http://plants.usda.gov/) to determine if a plant is native or not to Arizona. As SWEMP does not independently assess the current or potential impact of invasive plants, we include most non-native plant records contributed. We have not included agricultural crops that are non-native, for example apples, oranges, etc.In this open-file-report, we use the SWEMP07 update to summarize the occurrence of invasive plants in Arizona and present distribution maps for a select invasive plants in Arizona. We use the word occurrence purposefully instead of the word distribution. The SWEMP07 database only provides an estimate of the actual distribution of invasive plants in Arizona. The information provided is a first approximation of the state-wide extent of invasive plant distribution.

AVHRR composite period selection for land cover classification

USGS Publications Warehouse

Maxwell, S.K.; Hoffer, R.M.; Chapman, P.L.

2002-01-01

Multitemporal satellite image datasets provide valuable information on the phenological characteristics of vegetation, thereby significantly increasing the accuracy of cover type classifications compared to single date classifications. However, the processing of these datasets can become very complex when dealing with multitemporal data combined with multispectral data. Advanced Very High Resolution Radiometer (AVHRR) biweekly composite data are commonly used to classify land cover over large regions. Selecting a subset of these biweekly composite periods may be required to reduce the complexity and cost of land cover mapping. The objective of our research was to evaluate the effect of reducing the number of composite periods and altering the spacing of those composite periods on classification accuracy. Because inter-annual variability can have a major impact on classification results, 5 years of AVHRR data were evaluated. AVHRR biweekly composite images for spectral channels 1-4 (visible, near-infrared and two thermal bands) covering the entire growing season were used to classify 14 cover types over the entire state of Colorado for each of five different years. A supervised classification method was applied to maintain consistent procedures for each case tested. Results indicate that the number of composite periods can be halved-reduced from 14 composite dates to seven composite dates-without significantly reducing overall classification accuracy (80.4% Kappa accuracy for the 14-composite data-set as compared to 80.0% for a seven-composite dataset). At least seven composite periods were required to ensure the classification accuracy was not affected by inter-annual variability due to climate fluctuations. Concentrating more composites near the beginning and end of the growing season, as compared to using evenly spaced time periods, consistently produced slightly higher classification values over the 5 years tested (average Kappa) of 80.3% for the heavy early/late case as compared to 79.0% for the alternate dataset case).

Large Scale Meteorological Pattern of Extreme Rainfall in Indonesia

NASA Astrophysics Data System (ADS)

Kuswanto, Heri; Grotjahn, Richard; Rachmi, Arinda; Suhermi, Novri; Oktania, Erma; Wijaya, Yosep

2014-05-01

Extreme Weather Events (EWEs) cause negative impacts socially, economically, and environmentally. Considering these facts, forecasting EWEs is crucial work. Indonesia has been identified as being among the countries most vulnerable to the risk of natural disasters, such as floods, heat waves, and droughts. Current forecasting of extreme events in Indonesia is carried out by interpreting synoptic maps for several fields without taking into account the link between the observed events in the 'target' area with remote conditions. This situation may cause misidentification of the event leading to an inaccurate prediction. Grotjahn and Faure (2008) compute composite maps from extreme events (including heat waves and intense rainfall) to help forecasters identify such events in model output. The composite maps show large scale meteorological patterns (LSMP) that occurred during historical EWEs. Some vital information about the EWEs can be acquired from studying such maps, in addition to providing forecaster guidance. Such maps have robust mid-latitude meteorological patterns (for Sacramento and California Central Valley, USA EWEs). We study the performance of the composite approach for tropical weather condition such as Indonesia. Initially, the composite maps are developed to identify and forecast the extreme weather events in Indramayu district- West Java, the main producer of rice in Indonesia and contributes to about 60% of the national total rice production. Studying extreme weather events happening in Indramayu is important since EWEs there affect national agricultural and fisheries activities. During a recent EWE more than a thousand houses in Indramayu suffered from serious flooding with each home more than one meter underwater. The flood also destroyed a thousand hectares of rice plantings in 5 regencies. Identifying the dates of extreme events is one of the most important steps and has to be carried out carefully. An approach has been applied to identify the dates involving observations from multiple sites (rain gauges). The approach combines the POT (Peaks Over Threshold) with 'declustering' of the data to approximate independence based on the autocorrelation structure of each rainfall series. The cross correlation among sites is considered also to develop the event's criteria yielding a rational choice of the extreme dates given the 'spotty' nature of the intense convection. Based on the identified dates, we are developing a supporting tool for forecasting extreme rainfall based on the corresponding large-scale meteorological patterns (LSMPs). The LSMPs methodology focuses on the larger-scale patterns that the model are better able to forecast, as those larger-scale patterns create the conditions fostering the local EWE. Bootstrap resampling method is applied to highlight the key features that statistically significant with the extreme events. Grotjahn, R., and G. Faure. 2008: Composite Predictor Maps of Extraordinary Weather Events in the Sacramento California Region. Weather and Forecasting. 23: 313-335.

Late glacial and Holocene history of the Greenland Ice Sheet margin, Nunatarssuaq, Northwestern Greenland

NASA Astrophysics Data System (ADS)

Farnsworth, L. B.; Kelly, M. A.; Axford, Y.; Bromley, G. R.; Osterberg, E. C.; Howley, J. A.; Zimmerman, S. R. H.; Jackson, M. S.; Lasher, G. E.; McFarlin, J. M.

2015-12-01

Defining the late glacial and Holocene fluctuations of the Greenland Ice Sheet (GrIS) margin, particularly during periods that were as warm or warmer than present, provides a longer-term perspective on present ice margin fluctuations and informs how the GrIS may respond to future climate conditions. We focus on mapping and dating past GrIS extents in the Nunatarssuaq region of northwestern Greenland. During the summer of 2014, we conducted geomorphic mapping and collected rock samples for 10Be surface exposure dating as well as subfossil plant samples for 14C dating. We also obtained sediment cores from an ice-proximal lake. Preliminary 10Be ages of boulders deposited during deglaciation of the GrIS subsequent to the Last Glacial Maximum range from ~30-15 ka. The apparently older ages of some samples indicate the presence of 10Be inherited from prior periods of exposure. These ages suggest deglaciation occurred by ~15 ka however further data are needed to test this hypothesis. Subfossil plants exposed at the GrIS margin on shear planes date to ~ 4.6-4.8 cal. ka BP and indicate less extensive ice during middle Holocene time. Additional radiocarbon ages from in situ subfossil plants on a nunatak date to ~3.1 cal. ka BP. Geomorphic mapping of glacial landforms near Nordsø, a large proglacial lake, including grounding lines, moraines, paleo-shorelines, and deltas, indicate the existence of a higher lake level that resulted from a more extensive GrIS margin likely during Holocene time. A fresh drift limit, characterized by unweathered, lichen-free clasts approximately 30-50 m distal to the modern GrIS margin, is estimated to be late Holocene in age. 10Be dating of samples from these geomorphic features is in progress. Radiocarbon ages of subfossil plants exposed by recent retreat of the GrIS margin suggest that the GrIS was at or behind its present location at AD ~1650-1800 and ~1816-1889. Results thus far indicate that the GrIS margin in northwestern Greenland responded sensitively to Holocene climate changes. Ongoing research will improve the chronological constraints on these fluctuations.

Technical Report: Algorithm and Implementation for Quasispecies Abundance Inference with Confidence Intervals from Metagenomic Sequence Data

DOE Office of Scientific and Technical Information (OSTI.GOV)

McLoughlin, Kevin

2016-01-11

This report describes the design and implementation of an algorithm for estimating relative microbial abundances, together with confidence limits, using data from metagenomic DNA sequencing. For the background behind this project and a detailed discussion of our modeling approach for metagenomic data, we refer the reader to our earlier technical report, dated March 4, 2014. Briefly, we described a fully Bayesian generative model for paired-end sequence read data, incorporating the effects of the relative abundances, the distribution of sequence fragment lengths, fragment position bias, sequencing errors and variations between the sampled genomes and the nearest reference genomes. A distinctive featuremore » of our modeling approach is the use of a Chinese restaurant process (CRP) to describe the selection of genomes to be sampled, and thus the relative abundances. The CRP component is desirable for fitting abundances to reads that may map ambiguously to multiple targets, because it naturally leads to sparse solutions that select the best representative from each set of nearly equivalent genomes.« less

Reconstructing spatial and temporal patterns of paleoglaciation across Central Asia

NASA Astrophysics Data System (ADS)

Stroeven, Arjen P.

2014-05-01

Understanding the behaviour of mountain glaciers and ice caps, the evolution of mountain landscapes, and testing global climate models all require well-constrained information on past spatial and temporal patterns of glacier change. Particularly important are transitional regions that have high spatial and temporal variation in glacier activity and that can provide a sensitive record of past climate change. Central Asia is an extreme continental location with glaciers that have responded sensitively to variations in major regional climate systems. As an international team, we are reconstructing glacial histories of several areas of the Tibetan Plateau as well as along the Tian Shan, Altai and Kunlun Mountains. Building on previous work, we are using remote sensing-based geomorphological mapping augmented with field observations to map out glacial landforms and the maximum distributions of erratics. We then use cosmogenic nuclide Be-10 and Al-26, optically stimulated luminescence, and electron spin resonance dating of moraines and other landforms to compare dating techniques and to constrain the ages of defined extents of paleo-glaciers and ice caps. Comparing consistently dated glacial histories across central Asia provides an opportunity to examine shifts in the dominance patterns of climate systems over time in the region. Results to date show significant variations in the timing and extent of glaciation, including areas in the southeast Tibetan Plateau and Tian Shan with extensive valley and small polythermal ice cap glaciation during the global last glacial maximum in contrast to areas in central and northeast Tibetan Plateau that had very limited valley glacier expansion then. Initial numerical modelling attempting to simulate mapped and dated paleoglacial extents indicates that relatively limited cooling is sufficient to produce observed past expansions of glaciers across the Tibetan Plateau, and predicts complex basal thermal regimes in some locations that match patterns of past glacial erosion inferred from landform patterns and ages. Future modelling will examine glacier behaviour along major mountain ranges across central Asia.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yuan, Jiangye

Up-to-date maps of installed solar photovoltaic panels are a critical input for policy and financial assessment of solar distributed generation. However, such maps for large areas are not available. With high coverage and low cost, aerial images enable large-scale mapping, bit it is highly difficult to automatically identify solar panels from images, which are small objects with varying appearances dispersed in complex scenes. We introduce a new approach based on deep convolutional networks, which effectively learns to delineate solar panels in aerial scenes. The approach has successfully mapped solar panels in imagery covering 200 square kilometers in two cities, usingmore » only 12 square kilometers of training data that are manually labeled.« less

Subsurface site conditions and geology in the San Fernando earthquake area

DOE Office of Scientific and Technical Information (OSTI.GOV)

Duke, C.M.; Johnson, J.A.; Kharraz, Y.

1971-12-01

The report presents the progress to date in establishing the facts about dynamic subsurface properties and geological features in the area affected by the San Fernando earthquake of February 9, 1971. Special emphasis is given to the locations of accelerographs, seismoscopes and Seismological Field Survey aftershock instruments. Thirty shallow geophysical surveys were made for determination of S and P velocities, with damping measured at some sites. Deep velocity data were obtained from geophysical surveys by others. Soil Mechanics and water well borings by others were utilized. Published and ongoing geological studies were applied. Results are presented in the form ofmore » five geological cross-sections, nine subsurface exploration models extending through basement complex to depths of 14,000 feet, a general geologic map, the shallow geophysical surveys, and selected data on damping.« less

KSC-2009-2804

NASA Image and Video Library

2009-04-19

CAPE CANAVERAL, Fla. –– At Astrotech Space Operations in Titusville, Fla., a technician prepares for the installation of the solar array panel on the Lunar Reconnaissance Orbiter, or LRO. He stands in front of the fairing that will encapsulate the spacecraft at a later date. The orbiter will carry seven instruments to provide scientists with detailed maps of the lunar surface and enhance our understanding of the moon's topography, lighting conditions, mineralogical composition and natural resources. Information gleaned from LRO will be used to select safe landing sites, determine locations for future lunar outposts and help mitigate radiation dangers to astronauts. The polar regions of the moon are the main focus of the mission because continuous access to sunlight may be possible and water ice may exist in permanently shadowed areas of the poles. Launch of LRO is targeted for June 2. Photo credit: NASA/Jim Grossmann

Understanding RNA modifications: the promises and technological bottlenecks of the ‘epitranscriptome’

PubMed Central

Kapoor, Utkarsh

2017-01-01

The discovery of mechanisms that alter genetic information via RNA editing or introducing covalent RNA modifications points towards a complexity in gene expression that challenges long-standing concepts. Understanding the biology of RNA modifications represents one of the next frontiers in molecular biology. To this date, over 130 different RNA modifications have been identified, and improved mass spectrometry approaches are still adding to this list. However, only recently has it been possible to map selected RNA modifications at single-nucleotide resolution, which has created a number of exciting hypotheses about the biological function of RNA modifications, culminating in the proposition of the ‘epitranscriptome’. Here, we review some of the technological advances in this rapidly developing field, identify the conceptual challenges and discuss approaches that are needed to rigorously test the biological function of specific RNA modifications. PMID:28566301

Oasis desert farming selects environment-specific date palm root endophytic communities and cultivable bacteria that promote resistance to drought.

PubMed

Cherif, Hanene; Marasco, Ramona; Rolli, Eleonora; Ferjani, Raoudha; Fusi, Marco; Soussi, Asma; Mapelli, Francesca; Blilou, Ikram; Borin, Sara; Boudabous, Abdellatif; Cherif, Ameur; Daffonchio, Daniele; Ouzari, Hadda

2015-08-01

Oases are desert-farming agro-ecosystems, where date palm (Phoenix dactylifera L.) plays a keystone role in offsetting the effects of drought and maintaining a suitable microclimate for agriculture. At present, abundance, diversity and plant growth promotion (PGP) of date palm root-associated bacteria remain unknown. Considering the environmental pressure determined by the water scarcity in the desert environments, we hypothesized that bacteria associated with date palm roots improve plant resistance to drought. Here, the ecology of date palm root endophytes from oases in the Tunisian Sahara was studied with emphasis on their capacity to promote growth under drought. Endophytic communities segregated along a north-south gradient in correlation with geo-climatic parameters. Screening of 120 endophytes indicated that date palm roots select for bacteria with multiple PGP traits. Bacteria rapidly cross-colonized the root tissues of different species of plants, including the original Tunisian date palm cultivar, Saudi Arabian cultivars and Arabidopsis. Selected endophytes significantly increased the biomass of date palms exposed to repeated drought stress periods during a 9-month greenhouse experiment. Overall, results indicate that date palm roots shape endophytic communities that are capable to promote plant growth under drought conditions, thereby contributing an essential ecological service to the entire oasis ecosystem. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

Characterization of Mitogen-Activated Protein Kinase Expression in Nucleus Accumbens and Hippocampus of Rats Subjected to Food Selection in the Cafeteria Diet Protocol.

PubMed

Sarro-Ramírez, Andrea; Sánchez, Daniel; Tejeda-Padrón, Alma; Buenfil-Canto, Linda Vianey; Valladares-García, Jorge; Pacheco-Pantoja, Elda; Arias-Carrión, Oscar; Murillo-Rodríguez, Eric

2016-01-01

Obesity is a world-wide health problem that requires different experimental perspectives to understand the onset of this disease, including the neurobiological basis of food selection. From a molecular perspective, obesity has been related with activity of several endogenous molecules, including the mitogenactivated protein kinases (MAP-K). The aim of this study was to characterize MAP-K expression in hedonic and learning and memory brain-associated areas such as nucleus accumbens (AcbC) and hippocampus (HIPP) after food selection. We show that animals fed with cafeteria diet during 14 days displayed an increase in p38 MAP-K activity in AcbC if chose cheese. Conversely, a diminution was observed in animals that preferred chocolate in AcbC. Also, a decrease of p38 MAP-K phosphorylation was found in HIPP in rats that selected either cheese or chocolate. Our data demonstrate a putative role of MAP-K expression in food selection. These findings advance our understanding of neuromolecular basis engaged in obesity.

Radiocarbon dating of plant macrofossils from tidal-marsh sediment

USGS Publications Warehouse

Kemp, A.C.; Nelson, Alan R.; Horton, B.P.

2013-01-01

Tidal-marsh sediment is an archive of Holocene environmental changes, including movements of sea and land levels, and extreme events such as hurricanes, earthquakes, and tsunamis. Accurate and precise radiocarbon dating of environmental changes is necessary to estimate rates of change and the recurrence interval (frequency) of events. Plant macrofossils preserved in growth position (or deposited soon after death) in tidal-marsh sediment are ideal samples for dating such changes. In this chapter, we focus on the selection of plant macrofossils for radiocarbon dating and the application of ages from different types of macrofossils to varied research projects, and make recommendations for selection and preparation of tidal-marsh samples for dating.

Structure-contour maps on the top of the Mississippian carbonates and on top of the upper Cambrian and lower Ordovician Arbuckle Group, Joplin 1 degree by 2 degrees Quadrangle, Kansas and Missouri

USGS Publications Warehouse

Blair, Kevin P.; Berendsen, Pieter; Seeger, Cheryl M.

1992-01-01

This publication is a part of the folio of maps of the Joplin 1° X 2° quadrangle, Kansas and Missouri, which was prepared under the Conterminuous United States Mineral Assessment Program. Other publications in this folio to date include the U.S. Geological Survey Miscellaneous Field Studies Maps MF-2125-A and B (Erickson and others, 1990; Grisafe and Rueff, 1992). Additional maps showing other geologic aspects of the Joplin quadrangle will be published as U.S. Geological Survey maps bearing this same serial number with different letter suffixes (MF-2125-D, -E, and so forth).

Assessment of the Joplin 1 degree by 2 degrees Quadrangle, Kansas and Missouri, for Mississippi Valley-type deposits and other minerals

USGS Publications Warehouse

Pratt, Walden P.; Hayes, Timothy S.; Erickson, Ralph L.; Kisvarsanyi, Eva B.

1993-01-01

This map is a part of the folio of maps of the Joplin 1° X 2° quadrangle, Kansas and Missouri, which was prepared under the Conterminuous United States Mineral Assessment Program. Other publications in this folio to date include the U.S. Geological Survey Miscellaneous Field Studies Maps MF-2125-A through D (Erickson and others, 1990; Grisafe and Rueff, 1992; Blair and others, 1992; McCafferty and Cordell, 1992). Additional maps showing other geologic aspects of the Joplin quadrangle will be published as U.S. Geological Survey maps bearing this same serial number with different letter suffixes (MF-2125-F, -G, and so on).

Multidate mapping of mosquito habitat. [Nebraska, South Dakota

NASA Technical Reports Server (NTRS)

Woodzick, T. L.; Maxwell, E. L.

1977-01-01

LANDSAT data from three overpasses formed the data base for a multidate classification of 15 ground cover categories in the margins of Lewis and Clark Lake, a fresh water impoundment between South Dakota and Nebraska. When scaled to match topographic maps of the area, the ground cover classification maps were used as a general indicator of potential mosquito-breeding habitat by distinguishing productive wetlands areas from nonproductive nonwetlands areas. The 12 channel multidate classification was found to have an accuracy 23% higher than the average of the three single date 4 channel classifications.

Local Free Space Mapping and Path Guidance,

DTIC Science & Technology

1987-03-01

Free Space Mapping and Path Guidance 12. PERSONIAL UTI4OFS) William T. Cex and Nancy L. Campbell 1s. TYPE OF REPORT 13b. iME COVERED 14. DATE OF REPORT...84 JAN 52 A" 1OMON MAYBOfUSED NMlLEMIAUSTEO UNCLASSIFIED ALL OTHE EDTIN A’.SL Y2.7cesson For 7 *5~ IT D, TA ........... iCL ... . LOCAL FREE SPACE ... MAPPING AND PATH GUIDANCE By Distribuition/ Availabiliuy C0e William T. Gex and Nancy L. Campbell I Avail and/or Naval Ocean Systems Center ist speci1 l

Indexing, screening, coding and cataloging of earth resources aircraft mission data

NASA Technical Reports Server (NTRS)

1977-01-01

Tasks completed are as follows: (1) preparation of large Area Crop Inventory experiment for data base entry;(2) preparation of Earth Observations Aircraft Flight summary reports for publication; (3) updating of the aircraft mission index coverage map and Ames aircraft flight map; (4) Prepared of Earth Observation Helicopter Flight reports for publication; and (5) indexing of LANDSAT imagery. (6) formulation of phase 3 biowindows 1, 2, 3, and 4 listings by country, footprint, and acqusition dates; (7) preparation of flight summary reports; and (8) preparation of an Alaska state index coverage map.

77 FR 74266 - Review of National Environmental Policy Act Categorical Exclusion Survey Posted on DOT/FHWA Web Site

Federal Register 2010, 2011, 2012, 2013, 2014

2012-12-13

... of National Environmental Policy Act Categorical Exclusion Survey Posted on DOT/FHWA Web Site AGENCY... review is now available on the FHWA Web site, http://www.fhwa.dot.gov/map21 , and FTA Web site, http://www.fta.dot.gov/map21 . DATES: These reports were posted on the Web site on December 7, 2012...

Riparian habitat on the Humboldt River, Deeth to Elko, Nevada

NASA Technical Reports Server (NTRS)

Price, K. P.; Ridd, M. K.

1983-01-01

A map inventory of the major habitat types existing along the Humbolt River riparian zone in Nevada is described. Through aerialphotography, 16 riparian habitats are mapped that describe the ecological relationships between soil and vegetation types, flooding and soil erosion, and the various management practices employed to date. The specific land and water management techniques and their impact on the environment are considered.

3. Photographic copy of map. San Carlos Project, Arizona. Irrigation ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

3. Photographic copy of map. San Carlos Project, Arizona. Irrigation System. Department of the Interior. United States Indian Service. No date. Circa 1939. (Source: Henderson, Paul. U.S. Indian Irrigation Service. Supplemental Storage Reservoir, Gila River. November 10, 1939, RG 115, San Carlos Project, National Archives, Rocky Mountain Region, Denver, CO.) - San Carlos Irrigation Project, Lands North & South of Gila River, Coolidge, Pinal County, AZ

Z-Selective Metathesis Homocoupling of 1,3-Dienes by Molybdenum and Tungsten Monoaryloxide Pyrrolide (MAP) Complexes

PubMed Central

Townsend, Erik M.; Schrock, Richard R.; Hoveyda, Amir H.

2012-01-01

Molybdenum or tungsten MAP complexes that contain OHIPT as the aryloxide (hexaisopropylterphenoxide) are effective catalysts for homocoupling of simple (E)-1,3-dienes to give (E,Z,E)-trienes in high yield and with high Z selectivities. A vinylalkylidene MAP species was shown to have the expected syn structure in an X-ray study. MAP catalysts that contain OHMT (hexamethylterphenoxide) are relatively inefficient. PMID:22734508

OxfordGrid: a web interface for pairwise comparative map views.

PubMed

Yang, Hongyu; Gingle, Alan R

2005-12-01

OxfordGrid is a web application and database schema for storing and interactively displaying genetic map data in a comparative, dot-plot, fashion. Its display is composed of a matrix of cells, each representing a pairwise comparison of mapped probe data for two linkage groups or chromosomes. These are arranged along the axes with one forming grid columns and the other grid rows with the degree and pattern of synteny/colinearity between the two linkage groups manifested in the cell's dot density and structure. A mouse click over the selected grid cell launches an image map-based display for the selected cell. Both individual and linear groups of mapped probes can be selected and displayed. Also, configurable links can be used to access other web resources for mapped probe information. OxfordGrid is implemented in C#/ASP.NET and the package, including MySQL schema creation scripts, is available at ftp://cggc.agtec.uga.edu/OxfordGrid/.

Dating Violence among High School Students in Southeastern North Carolina

ERIC Educational Resources Information Center

Kim-Godwin, Yeoun Soo; Clements, Carrie; McCuiston, Ashley M.; Fox, Jane A.

2009-01-01

Adolescents are a high-risk group for dating violence. Using the Youth Risk Behavior Survey data, this study examined the associations among dating violence (including physical dating violence [PDV] and sexual dating violence [SDV]) and selected health risk behaviors among 375 and 372 high school students, in 2005 and 2007, respectively, in…

The relative age effect in soccer: a match-related perspective.

PubMed

Vaeyens, Roel; Philippaerts, Renaat M; Malina, Robert M

2005-07-01

Asymmetries in the distributions of birth dates in senior professional and youth soccer players have been interpreted as evidence for systematic discrimination against individuals born shortly before the cut-off date in assigning youth to specific age groups. This concept is known as the "relative age effect". The results of a longitudinal study of birth date distritubions of 2757 semi-professional and amateur senior soccer players in Belgium are presented. Records for competitive games were available in official statistics provided by the Royal Belgian Football Association. The chi-square statistic was used to examine differences between observed and expected birth date distributions. Regression analyses indicated a shift of bias when two different start dates were compared. Players born in the early part of the new age band (January to March) were over-represented compared with players born late in the new selection period (October to December). However, players with birthdays at the start of the old selection year (August) were still represented. In a retrospective analysis of 2138 players, variables indicative of match involvement, number of selections for matches, and time played were examined in relation to the relative age effect. The group of semi-professional and amateur senior soccer players born in the first quarter of the selected age band received more playing opportunities. Comparisons of birth date distributions (traditional approach to relative age effect) with match-related variables gave similar, though not entirely consistent, results. However, there were no differences for the mean number of selections and for playing minutes between players born at the start or the end of the selection year. Our findings suggest that match-based variables may provide a more reliable indication of the relative age effect in soccer.

Multicriteria analysis using open-source data and software for the implementation of a centralized biomedical waste management system in a developing country (Guinea, Conakry).

NASA Astrophysics Data System (ADS)

Pérez Peña, José Vicente; Baldó, Mane; Acosta, Yarci; Verschueren, Laurent; Thibaud, Kenmognie; Bilivogui, Pépé; Jean-Paul Ngandu, Alain; Beavogui, Maoro

2017-04-01

In the last decade the increasing interest for public health has promoted specific regulations for the transport, storage, transformation and/or elimination of potentially toxic waste. A special concern should focus on the effective management of biomedical waste, due to the environmental and health risk associated with them. The first stage for the effective management these waste includes the selection of the best sites for the location of facilities for its storage and/or elimination. Best-site selection is accomplished by means of multi-criteria decision analyses (MCDA) that aim to minimize the social and environmental impact, and to maximize management efficiency. In this work we presented a methodology that uses open-source software and data to analyze the best location for the implantation of a centralized waste management system in a developing country (Guinea, Conakry). We applied an analytical hierarchy process (AHP) using different thematic layers such as land use (derived from up-to-date Sentinel 2 remote sensing images), soil type, distance and type of roads, hydrography, distance to dense populated areas, etc. Land-use data were derived from up-to-date Sentinel 2 remote sensing images, whereas roads and hydrography were obtained from the Open Street Map database and latter validated with administrative data. We performed the AHP analysis with the aid of QGIS open-software Geospatial Information System. This methodology is very effective for developing countries as it uses open-source software and data for the MCDA analysis, thus reducing costs in these first stages of the integrated analysis.

Development of an occupational advice intervention for patients undergoing lower limb arthroplasty (the OPAL study).

PubMed

Baker, Paul; Coole, Carol; Drummond, Avril; McDaid, Catriona; Khan, Sayeed; Thomson, Louise; Hewitt, Catherine; McNamara, Iain; McDonald, David; Fitch, Judith; Rangan, Amar

2018-06-28

There are an increasing number of patients of working age undergoing hip and knee replacements. Currently there is variation in the advice and support given about sickness absence, recovery to usual activities and return to work after these procedures. Earlier, sustainable, return to work improves the health of patients and benefits their employers and society. An intervention that encourages and supports early recovery to usual activities, including work, has the potential to reduce the health and socioeconomic burden of hip and knee replacements. A two-phase research programme delivered over 27 months will be used to develop and subsequently test the feasibility of an occupational advice intervention to facilitate return to work and usual activities in patients undergoing lower limb arthroplasty. The 2 phases will incorporate a six-stage intervention mapping process: Phase 1: Intervention mapping stages 1-3: 1 Needs assessment (including rapid evidence synthesis, prospective cohort analysis and structured stakeholder interviews) 2 Identification of intended outcomes and performance objectives 3 Selection of theory-based methods and practical strategies Phase 2: Intervention mapping stages 4-6: 4 Development of components and materials for the occupational advice intervention using a modified Delphi process 5 Adoption and implementation of the intervention 6 Evaluation and feasibility testing The study will be undertaken in four National Health Service (NHS) hospitals in the United Kingdom and two Higher Education Institutions. OPAL (Occupational advice for Patients undergoing Arthroplasty of the Lower limb) aims to develop an occupational advice intervention to support early recovery to usual activities including work, which is tailored to the requirements of patients undergoing hip and knee replacements. The developed intervention will then be assessed with a specific focus on evaluating its feasibility as a potential trial intervention to improve speed of recovery to usual activities including work. The study was registered retrospectively with the International Standard Randomised Controlled Trials Number (ISRCTN): 27426982 (Date 20/12/2016) and the International prospective register of systematic reviews (PROSPERO): CRD42016045235 (Date 04/08/2016).

Cholera

MedlinePlus

... from cholera. WHO 2016. www.who.int/cholera/technical/en/ . Accessed March 18, 2016. Review Date 3/ ... Duplication for commercial use must be authorized in writing by ADAM Health Solutions. About MedlinePlus Site Map ...

50 CFR 222.403 - Duration of selection; effective date.

Code of Federal Regulations, 2011 CFR

2011-10-01

... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Duration of selection; effective date. 222.403 Section 222.403 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS GENERAL ENDANGERED AND THREATENED MARINE...

50 CFR 222.403 - Duration of selection; effective date.

Code of Federal Regulations, 2012 CFR

2012-10-01

... 50 Wildlife and Fisheries 10 2012-10-01 2012-10-01 false Duration of selection; effective date. 222.403 Section 222.403 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS GENERAL ENDANGERED AND THREATENED MARINE...

Use of radar remote sensing (RADARSAT) to map winter wetland habitat for shorebirds in an agricultural landscape.

PubMed

Taft, Oriane W; Haig, Susan M; Kiilsgaard, Chris

2004-05-01

Many of today's agricultural landscapes once held vast amounts of wetland habitat for waterbirds and other wildlife. Successful restoration of these landscapes relies on access to accurate maps of the wetlands that remain. We used C-band (5.6-cm-wavelength), HH-polarized radar remote sensing (RADARSAT) at a 38 degrees incidence angle (8-m resolution) to map the distribution of winter shorebird (Charadriiformes) habitat on agricultural lands in the Willamette Valley of western Oregon. We acquired imagery on three dates (10 December 1999, 27 January 2000, and 15 March 2000) and simultaneously collected ground reference data to classify radar signatures and evaluate map accuracy of four habitat classes: (1) wet with < or = 50% vegetation (considered optimal shorebird habitat), (2) wet with > 50% vegetation, (3) dry with < or = 50% vegetation, and (4) dry with > 50% vegetation. Overall accuracy varied from 45 to 60% among the three images, but the accuracy of focal class 1 was greater, ranging from 72 to 80%. Class 4 coverage was stable and dominated maps (40% of mapped study area) for all three dates, while coverage of class 3 decreased slightly throughout the study period. Among wet classes, class 1 was most abundant (about 30% coverage) in December and January, decreasing in March to approximately 15%. Conversely, class 2 increased dramatically from January to March, likely due to transition from class 1 as vegetation grew. This approach was successful in detecting optimal habitat for shorebirds on agricultural lands. For modest classification schemes, radar remote sensing is a valuable option for wetland mapping in areas where cloud cover is persistent.

Relevance of ERTS-1 to the state of Ohio

NASA Technical Reports Server (NTRS)

Sweet, D. C. (Principal Investigator); Wells, T. L.; Wukelic, G. E.

1973-01-01

The author has identified the following significant results. To date, only one significant result has been reported for the Ohio ERTS program. This result relates to the proven usefulness of ERTS-1 imagery for mapping and inventorying strip-mined areas in southeastern Ohio. ERTS provides a tool for rapidly and economically acquiring an up-to-date inventory of strip-mined lands for state planning purposes which was not previously possible.

Quantifying efficacy and limits of unmanned aerial vehicle (UAV) technology for weed seedling detection as affected by sensor resolution.

PubMed

Peña, José M; Torres-Sánchez, Jorge; Serrano-Pérez, Angélica; de Castro, Ana I; López-Granados, Francisca

2015-03-06

In order to optimize the application of herbicides in weed-crop systems, accurate and timely weed maps of the crop-field are required. In this context, this investigation quantified the efficacy and limitations of remote images collected with an unmanned aerial vehicle (UAV) for early detection of weed seedlings. The ability to discriminate weeds was significantly affected by the imagery spectral (type of camera), spatial (flight altitude) and temporal (the date of the study) resolutions. The colour-infrared images captured at 40 m and 50 days after sowing (date 2), when plants had 5-6 true leaves, had the highest weed detection accuracy (up to 91%). At this flight altitude, the images captured before date 2 had slightly better results than the images captured later. However, this trend changed in the visible-light images captured at 60 m and higher, which had notably better results on date 3 (57 days after sowing) because of the larger size of the weed plants. Our results showed the requirements on spectral and spatial resolutions needed to generate a suitable weed map early in the growing season, as well as the best moment for the UAV image acquisition, with the ultimate objective of applying site-specific weed management operations.

Archaeological investigations at a toolstone source area and temporary camp: Sample Unit 19-25, Nevada Test Site, Nye County, Nevada. Technical report No. 77

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jones, R.C.; DuBarton, A.; Edwards, S.

1993-12-31

Archaeological investigations were initiated at Sample Unit 19--25 to retrieve information concerning settlement and subsistence data on the aboriginal hunter and gatherers in the area. Studies included collection and mapping of 35.4 acres at site 26NY1408 and excavation and mapping of 0.02 acres at site 26NY7847. Cultural resources include two rock and brush structures and associated caches and a large lithic toolstone source area and lithic artifact scatter. Temporally diagnostic artifacts indicate periodic use throughout the last 12,000 years; however dates associated with projectile points indicate most use was in the Middle and Late Archaic. Radiocarbon dates from the rockmore » and brush structures at site 26NY7847 indicate a construction date of A.D. 1640 and repair between A.D. 1800 and 1950 for feature 1 and between A.D. 1330 and 1390 and repair at A.D. 1410 for feature 2. The dates associated with feature 2 place its construction significantly earlier than similar structures found elsewhere on Pahute Mesa. Activity areas appear to reflect temporary use of the area for procurement of available lithic and faunal resources and the manufacture of tools.« less

Quantifying Efficacy and Limits of Unmanned Aerial Vehicle (UAV) Technology for Weed Seedling Detection as Affected by Sensor Resolution

PubMed Central

Peña, José M.; Torres-Sánchez, Jorge; Serrano-Pérez, Angélica; de Castro, Ana I.; López-Granados, Francisca

2015-01-01

In order to optimize the application of herbicides in weed-crop systems, accurate and timely weed maps of the crop-field are required. In this context, this investigation quantified the efficacy and limitations of remote images collected with an unmanned aerial vehicle (UAV) for early detection of weed seedlings. The ability to discriminate weeds was significantly affected by the imagery spectral (type of camera), spatial (flight altitude) and temporal (the date of the study) resolutions. The colour-infrared images captured at 40 m and 50 days after sowing (date 2), when plants had 5–6 true leaves, had the highest weed detection accuracy (up to 91%). At this flight altitude, the images captured before date 2 had slightly better results than the images captured later. However, this trend changed in the visible-light images captured at 60 m and higher, which had notably better results on date 3 (57 days after sowing) because of the larger size of the weed plants. Our results showed the requirements on spectral and spatial resolutions needed to generate a suitable weed map early in the growing season, as well as the best moment for the UAV image acquisition, with the ultimate objective of applying site-specific weed management operations. PMID:25756867

Increased variability of watershed areas in patients with high-grade carotid stenosis.

PubMed

Kaczmarz, Stephan; Griese, Vanessa; Preibisch, Christine; Kallmayer, Michael; Helle, Michael; Wustrow, Isabel; Petersen, Esben Thade; Eckstein, Hans-Henning; Zimmer, Claus; Sorg, Christian; Göttler, Jens

2018-03-01

Watershed areas (WSAs) of the brain are most susceptible to acute hypoperfusion due to their peripheral location between vascular territories. Additionally, chronic WSA-related vascular processes underlie cognitive decline especially in patients with cerebral hemodynamic compromise. Despite of high relevance for both clinical diagnostics and research, individual in vivo WSA definition is fairly limited to date. Thus, this study proposes a standardized segmentation approach to delineate individual WSAs by use of time-to-peak (TTP) maps and investigates spatial variability of individual WSAs. We defined individual watershed masks based on relative TTP increases in 30 healthy elderly persons and 28 patients with unilateral, high-grade carotid stenosis, being at risk for watershed-related hemodynamic impairment. Determined WSA location was confirmed by an arterial transit time atlas and individual super-selective arterial spin labeling. We compared spatial variability of WSA probability maps between groups and assessed TTP differences between hemispheres in individual and group-average watershed locations. Patients showed significantly higher spatial variability of WSAs than healthy controls. Perfusion on the side of the stenosis was delayed within individual watershed masks as compared to a watershed template derived from controls, being independent from the grade of the stenosis and collateralization status of the circle of Willis. Results demonstrate feasibility of individual WSA delineation by TTP maps in healthy elderly and carotid stenosis patients. Data indicate necessity of individual segmentation approaches especially in patients with hemodynamic compromise to detect critical regions of impaired hemodynamics.

Assessing Potential Conservation and Restoration Areas of Freshwater Fish Fauna in the Indian River Basins

NASA Astrophysics Data System (ADS)

Bhatt, Jay P.; Manish, Kumar; Mehta, Rajender; Pandit, Maharaj K.

2016-05-01

Conservation efforts globally are skewed toward terrestrial ecosystems. To date, conservation of aquatic ecosystems, in particular fish fauna, is largely neglected. We provide a country-wide assessment of Indian river ecosystems in order to identify and prioritize areas for protection and restoration of freshwater fish fauna. Using various biodiversity and anthropogenic attributes, coupled with tools of ecological modeling, we delineated areas for fish fauna conservation and restoration in the 20 major river basins of India. To do this, we used prioritization analyses and reserve selection algorithms to derive conservation value index (CVI) and vulnerability index (VI) of the river basins. CVI was estimated using endemicity, rarity, conservation value, and taxonomic singularity, while VI was estimated using a disturbance index derived from percent geographic area of the basin under human settlements, human population density, predominant land use, and total number of exotic fish species in each basin. The two indices, CVI and VI, were converted into geo-referenced maps, and each map was super-imposed onto species richness and forest cover maps, respectively. After superimposition, areas with high CVI and low VI shade intensities were delineated for conservation, while areas with high CVI and high VI shade intensities were demarcated for restoration. In view of the importance of freshwater fish for human livelihoods and consumption, and ecosystems of India's rivers, we call for urgent attention to the conservation of their fish fauna along with restoration of their degraded habitats.

Mapping contacts between gRNA and mRNA in trypanosome RNA editing.

PubMed

Leung, S S; Koslowsky, D J

1999-02-01

All guide RNAs (gRNAs) identified to date have defined 5' anchor sequences, guiding sequences and a non-encoded 3' uridylate tail. The 5' anchor is required for in vitro editing and is thought to be responsible for selection and binding to the pre-edited mRNA. Little is known, however, about how the gRNAs are used to direct RNA editing. Utilizing the photo-reactive crosslinking agent, azidophenacyl (APA), attached to the 5'- or 3'-terminus of the gRNA, we have begun to map the structural relationships between the different defined regions of the gRNA with the pre-edited mRNA. Analyses of crosslinked conjugates produced with a 5'-terminal APA group confirm that the anchor of the gRNA is correctly positioning the interacting molecules. 3' Crosslinks (X-linker placed at the 3'-end of a U10tail) have also been mapped for three different gRNA/mRNA pairs. In all cases, analyses indicate that the U-tail can interact with a range of nucleotides located upstream of the first edited site. It appears that the U-tail prefers purine-rich sites, close to the first few editing sites. These results suggest that the U-tail may act in concert with the anchor to melt out secondary structure in the mRNA in the immediate editing domain, possibly increasing the accessibility of the editing complex to the proper editing sites.

Assessing Potential Conservation and Restoration Areas of Freshwater Fish Fauna in the Indian River Basins.

PubMed

Bhatt, Jay P; Manish, Kumar; Mehta, Rajender; Pandit, Maharaj K

2016-05-01

Conservation efforts globally are skewed toward terrestrial ecosystems. To date, conservation of aquatic ecosystems, in particular fish fauna, is largely neglected. We provide a country-wide assessment of Indian river ecosystems in order to identify and prioritize areas for protection and restoration of freshwater fish fauna. Using various biodiversity and anthropogenic attributes, coupled with tools of ecological modeling, we delineated areas for fish fauna conservation and restoration in the 20 major river basins of India. To do this, we used prioritization analyses and reserve selection algorithms to derive conservation value index (CVI) and vulnerability index (VI) of the river basins. CVI was estimated using endemicity, rarity, conservation value, and taxonomic singularity, while VI was estimated using a disturbance index derived from percent geographic area of the basin under human settlements, human population density, predominant land use, and total number of exotic fish species in each basin. The two indices, CVI and VI, were converted into geo-referenced maps, and each map was super-imposed onto species richness and forest cover maps, respectively. After superimposition, areas with high CVI and low VI shade intensities were delineated for conservation, while areas with high CVI and high VI shade intensities were demarcated for restoration. In view of the importance of freshwater fish for human livelihoods and consumption, and ecosystems of India's rivers, we call for urgent attention to the conservation of their fish fauna along with restoration of their degraded habitats.

Drawing out the Resistance Narrative via Mapping in "The Selected Works of T. S. Spivet"

ERIC Educational Resources Information Center

Hameed, Alya

2017-01-01

Though many children's texts include maps that visually demarcate their journeys, modern texts rarely involve active mapping by child characters themselves, suggesting that children cannot (or should not) conceptualise the world for themselves, but require an adult's guidance to traverse it. Reif Larsen's "The Selected Works of T. S.…

The research of selection model based on LOD in multi-scale display of electronic map

NASA Astrophysics Data System (ADS)

Zhang, Jinming; You, Xiong; Liu, Yingzhen

2008-10-01

This paper proposes a selection model based on LOD to aid the display of electronic map. The ratio of display scale to map scale is regarded as a LOD operator. The categorization rule, classification rule, elementary rule and spatial geometry character rule of LOD operator setting are also concluded.

Near coast sedimentary stratigraphy as a proxy for climatic instability

NASA Astrophysics Data System (ADS)

McLivenny, J.

2009-04-01

Several studies have indicated a link between climatic deterioration and dune stability (Wilson 2002, Issar 2003, Dawson et al 2004). The frequency and magnitude of storms have been cited as a key variable in the stability of large dune systems. For the stratigraphy of dune systems to act as a regional climatic proxy there must be a good regional relationship between known climatic events and regionally correlated stratigraphic changes. Dunnet Bay in Caithness, Northern Scotland was chosen as a study site to look at the relationship between dune stability and climatic change during the late Holocene in Northern Scotland. Dunnet Bay was chosen for its physical attributes which make it an excellent natural sediment trap. Tucked in between headlands which act as barriers to long-shore transport the predominant movement of sediment there is straight onshore, with only minor amounts being lost to the sea. The immediate back-dune stratigraphy, colloquially known as "links", provided evidence of peat formation and dune stability. Stratigraphy was mapped using traditional field techniques and ground penetrating radar. The cores consisted mostly of massive layers of sand interleaved with peat. Sand layers were dated with optically stimulated luminescence (OSL) and interpreted as reflecting high wind energy regimes transporting sand inland. Peat layers were C14 dated and taken as representing climatic stability. Stratigraphy was mapped using hand auguring, percussion coring, and open sections. Ground penetrating radar was also used to look at the continuity of key layers. OSL dating in two open sections showed dates obtained from the first section (1790 AD ±70, 53 BC ± 100, 300 BC ± 100, 400 BC ± 100) mapped to the top of the second section (1800 AD ± 100, 1500 BC ± 200, 2900 BC ± 300) which was consistent with stratigraphy increasing sediment thickness towards the centre of the bay. The results were consistent with acquired C14 dates from selected peat layers. Taken collectively the results are consistent with some known episodes of climatic instability which occurred during the mid Holocene with instability phases occurring in Dunnet from approximately 6300- 4250 yrs BP, associated with climatic deterioration between 6000 - 5,200 Yrs BP (Lamb 1995) and dune instability between 2560 - 3900 Yrs BP, associated with an abrupt change of climate (Anderson 1995) In addition to the luminescence dates, 31 luminescence profiling dates were acquired in order to look at the continuity of the age vs. depth profile. Luminescence profile dates are small samples that require less preparation prior to luminescence measurement than full luminescence dating. Although larger errors are associated with luminescence profiling, it offered means of identifying at lesser cost the possible occurrence of mixing between eroded layers. The stratigraphic chronology was compared to other local and regional dune studies and periods of climatic deterioration found in other proxies. The GISP2 ice core (Greenland Ice Sheet Project) was found to provide chemical proxies for North Atlantic storminess which partially explained our observed stratigraphy (O`brien et al 1995). It is concluded that changes in dune stability at a regional scale are also influenced by local variables, so that one should be careful when attempting to draw stratigraphy to climate change. Key References: Issar, A. (2003) Climate changes during the Holocene and their impact on hydrological systems. Published by the Cambridge University Press 2003. Wilson, P. (2002) Holocene coastal dune development on the South Erridale peninsula, Wester Ross, Scotland. Scottish Journal of Geology, 38, 1, 5-13. Dawson, S., smith, D., Jordan, J., and Dawson D. G. (2004) Late Holocene coastal sand movements in the outer Hebrides N. W. Scotland. Marine Geology 210, 281-306 O`Brien, S. M. Mayewski, P.A. Meeker, L. D., Meese, D. A., Twickler, M. S. & Whitlow, S. I. (1995) Complexity of the Holocene Climate as reconstructed from a Greenland ice core. Science 270, pp 1962-1964 Lamb, H. (1995) Climate, History and the Modern World. Published by Routledge ISBN 0415127343, 9780415127349 2nd ed. Anderson, D. E. (1995) An abrupt mid-Holocene decline of pinus sylvestris in Glen Torridon, north west Scotland: Implications for paleoclimatic change. School of Geography and the Environment Research papers, Oxford

Using Temporal Modulation Sensitivity to Select Stimulation Sites for Processor MAPs in Cochlear Implant Listeners

PubMed Central

Garadat, Soha N.; Zwolan, Teresa A.; Pfingst, Bryan E.

2013-01-01

Previous studies in our laboratory showed that temporal acuity as assessed by modulation detection thresholds (MDTs) varied across activation sites and that this site-to-site variability was subject specific. Using two 10-channel MAPs, the previous experiments showed that processor MAPs that had better across-site mean (ASM) MDTs yielded better speech recognition than MAPs with poorer ASM MDTs tested in the same subject. The current study extends our earlier work on developing more optimal fitting strategies to test the feasibility of using a site-selection approach in the clinical domain. This study examined the hypothesis that revising the clinical speech processor MAP for cochlear implant (CI) recipients by turning off selected sites that have poorer temporal acuity and reallocating frequencies to the remaining electrodes would lead to improved speech recognition. Twelve CI recipients participated in the experiments. We found that site selection procedure based on MDTs in the presence of a masker resulted in improved performance on consonant recognition and recognition of sentences in noise. In contrast, vowel recognition was poorer with the experimental MAP than with the clinical MAP, possibly due to reduced spectral resolution when sites were removed from the experimental MAP. Overall, these results suggest a promising path for improving recipient outcomes using personalized processor-fitting strategies based on a psychophysical measure of temporal acuity. PMID:23881208

Regional snow-avalanche detection using object-based image analysis of near-infrared aerial imagery

NASA Astrophysics Data System (ADS)

Korzeniowska, Karolina; Bühler, Yves; Marty, Mauro; Korup, Oliver

2017-10-01

Snow avalanches are destructive mass movements in mountain regions that continue to claim lives and cause infrastructural damage and traffic detours. Given that avalanches often occur in remote and poorly accessible steep terrain, their detection and mapping is extensive and time consuming. Nonetheless, systematic avalanche detection over large areas could help to generate more complete and up-to-date inventories (cadastres) necessary for validating avalanche forecasting and hazard mapping. In this study, we focused on automatically detecting avalanches and classifying them into release zones, tracks, and run-out zones based on 0.25 m near-infrared (NIR) ADS80-SH92 aerial imagery using an object-based image analysis (OBIA) approach. Our algorithm takes into account the brightness, the normalised difference vegetation index (NDVI), the normalised difference water index (NDWI), and its standard deviation (SDNDWI) to distinguish avalanches from other land-surface elements. Using normalised parameters allows applying this method across large areas. We trained the method by analysing the properties of snow avalanches at three 4 km-2 areas near Davos, Switzerland. We compared the results with manually mapped avalanche polygons and obtained a user's accuracy of > 0.9 and a Cohen's kappa of 0.79-0.85. Testing the method for a larger area of 226.3 km-2, we estimated producer's and user's accuracies of 0.61 and 0.78, respectively, with a Cohen's kappa of 0.67. Detected avalanches that overlapped with reference data by > 80 % occurred randomly throughout the testing area, showing that our method avoids overfitting. Our method has potential for large-scale avalanche mapping, although further investigations into other regions are desirable to verify the robustness of our selected thresholds and the transferability of the method.

Land area change and fractional water maps in the Chenier Plain, Louisiana, following hurricane Rita

NASA Astrophysics Data System (ADS)

Palaseanu-Lovejoy, M.; Kranenburg, C.; Brock, J. C.

2009-12-01

The objective of this study is to develop a fractional water map at 30-m resolution scale using QuickBird and/or IKONOS high-resolution imagery as dependent variable to investigate the impact of hurricane Rita in the Chenier Plain, Louisiana. Eleven different indices were tested to obtain a high-resolution land / water classification on QuickBird (acquired on 05/23/2003) and IKONOS (acquired on 03/25/2006) images. The percent area covered by water in the high resolution images varied from 22 to 26% depending on the index used , with the simple ratio index (red band / NIR band) accounting for the lowest percent and the blue ratio index (blue band / sum(all bands)) for the highest percent. Using the ERDAS NLCD (National Land Cover Data) Mapping tool module, 100, 000 stratified random sample points with minimum 1000 points per stratum were selected from the high resolution dependent variable as training information for the independent variable layers. The rules for the regression tree were created using the data mining software Rulequest Cubist v. 2.05. This information was used to generate a fractional water map for the entire Landsat scene. The increase in water areas of about 10 - 15% between 2003 to 2006, as well as temporary changes in the water - land configurations are attributed to remnant flooding and removal of aquatic vegetation caused by hurricane Rita, and water level variations caused by tidal and / or meteorological variations between the acquisition dates of the satellite images. This analysis can assist in monitoring post-hurricane wetland recovery and assess trends in land loss due to extreme storm events, although estimation of permanent land loss cannot be made until wetland areas have the opportunity to recover from hurricane impacts.

Using perceptual rules in interactive visualization

NASA Astrophysics Data System (ADS)

Rogowitz, Bernice E.; Treinish, Lloyd A.

1994-05-01

In visualization, data are represented as variations in grayscale, hue, shape, and texture. They can be mapped to lines, surfaces, and glyphs, and can be represented statically or in animation. In modem visualization systems, the choices for representing data seem unlimited. This is both a blessing and a curse, however, since the visual impression created by the visualization depends critically on which dimensions are selected for representing the data (Bertin, 1967; Tufte, 1983; Cleveland, 1991). In modem visualization systems, the user can interactively select many different mapping and representation operations, and can interactively select processing operations (e.g., applying a color map), realization operations (e.g., generating geometric structures such as contours or streamlines), and rendering operations (e.g., shading or ray-tracing). The user can, for example, map data to a color map, then apply contour lines, then shift the viewing angle, then change the color map again, etc. In many systems, the user can vary the choices for each operation, selecting, for example, particular color maps, contour characteristics, and shading techniques. The hope is that this process will eventually converge on a visual representation which expresses the structure of the data and effectively communicates its message in a way that meets the user's goals. Sometimes, however, it results in visual representations which are confusing, misleading, and garish.

Increased detection of precancerous cervical lesions with adjunctive dynamic spectral imaging.

PubMed

DeNardis, Sara A; Lavin, Philip T; Livingston, Jeff; Salter, William R; James-Patrick, Nanette; Papagiannakis, Emmanouil; Olson, Christopher G; Weinberg, Lori

2017-01-01

To validate, in US community-based colposcopy clinics, previous reports of increased detection of high-grade cervical intraepithelial neoplasia (CIN2+) with biopsies selected using dynamic spectral imaging (DSI) mapping after standard colposcopy. Cross-sectional observational study of 26 colposcopists across nine clinics recruiting consecutive colposcopy patients. Standard assessment with biopsy selections was completed before seeing the DSI map which was subsequently interpreted and used for additional biopsies per clinical judgment. Primary measure was the number of women with CIN2+ detected by DSI-assisted biopsies, over those detected by standard colposcopy biopsies. A total of 887 women were recruited. After exclusions, 881 women and 1,189 biopsies were analyzed. Standard biopsy detected 78 women with CIN2+ and DSI-assisted biopsies another 34, increasing the detection rate from 8.85% to 12.71% ( p =0.00016). This was achieved with 16.16% of DSI-assisted biopsies finding CIN2+ compared to 13.24% for the preceding standard biopsies. For secondary specificity analysis, 431 women had only

Inferring the evolution of the major histocompatibility complex of wild pigs and peccaries using hybridisation DNA capture-based sequencing.

PubMed

Lee, Carol; Moroldo, Marco; Perdomo-Sabogal, Alvaro; Mach, Núria; Marthey, Sylvain; Lecardonnel, Jérôme; Wahlberg, Per; Chong, Amanda Y; Estellé, Jordi; Ho, Simon Y W; Rogel-Gaillard, Claire; Gongora, Jaime

2018-06-01

The major histocompatibility complex (MHC) is a key genomic model region for understanding the evolution of gene families and the co-evolution between host and pathogen. To date, MHC studies have mostly focused on species from major vertebrate lineages. The evolution of MHC classical (Ia) and non-classical (Ib) genes in pigs has attracted interest because of their antigen presentation roles as part of the adaptive immune system. The pig family Suidae comprises over 18 extant species (mostly wild), but only the domestic pig has been extensively sequenced and annotated. To address this, we used a DNA-capture approach, with probes designed from the domestic pig genome, to generate MHC data for 11 wild species of pigs and their closest living family, Tayassuidae. The approach showed good efficiency for wild pigs (~80% reads mapped, ~87× coverage), compared to tayassuids (~12% reads mapped, ~4× coverage). We retrieved 145 MHC loci across both families. Phylogenetic analyses show that the class Ia and Ib genes underwent multiple duplications and diversifications before suids and tayassuids diverged from their common ancestor. The histocompatibility genes mostly form orthologous groups and there is genetic differentiation for most of these genes between Eurasian and sub-Saharan African wild pigs. Tests of selection showed that the peptide-binding region of class Ib genes was under positive selection. These findings contribute to better understanding of the evolutionary history of the MHC, specifically, the class I genes, and provide useful data for investigating the immune response of wild populations against pathogens.

Increased detection of precancerous cervical lesions with adjunctive dynamic spectral imaging

PubMed Central

DeNardis, Sara A; Lavin, Philip T; Livingston, Jeff; Salter, William R; James-Patrick, Nanette; Papagiannakis, Emmanouil; Olson, Christopher G; Weinberg, Lori

2017-01-01

Objective To validate, in US community-based colposcopy clinics, previous reports of increased detection of high-grade cervical intraepithelial neoplasia (CIN2+) with biopsies selected using dynamic spectral imaging (DSI) mapping after standard colposcopy. Study design Cross-sectional observational study of 26 colposcopists across nine clinics recruiting consecutive colposcopy patients. Standard assessment with biopsy selections was completed before seeing the DSI map which was subsequently interpreted and used for additional biopsies per clinical judgment. Primary measure was the number of women with CIN2+ detected by DSI-assisted biopsies, over those detected by standard colposcopy biopsies. Results A total of 887 women were recruited. After exclusions, 881 women and 1,189 biopsies were analyzed. Standard biopsy detected 78 women with CIN2+ and DSI-assisted biopsies another 34, increasing the detection rate from 8.85% to 12.71% (p=0.00016). This was achieved with 16.16% of DSI-assisted biopsies finding CIN2+ compared to 13.24% for the preceding standard biopsies. For secondary specificity analysis, 431 women had only

Diversity of the dominant bacterial species on sliced cooked pork products at expiration date in the Belgian retail.

PubMed

Geeraerts, Wim; Pothakos, Vasileios; De Vuyst, Luc; Leroy, Frédéric

2017-08-01

Pork-based cooked products, such as cooked hams, are economically valuable foods that are vulnerable to bacterial spoilage, even when applying cooling and modified atmosphere packaging (MAP). Besides a common presence of Brochothrix thermosphacta, their microbiota are usually dominated by lactic acid bacteria (LAB). Yet, the exact LAB species diversity can differ considerably among products. In this study, 42 sliced cooked pork samples were acquired from three different Belgian supermarkets to map their bacterial heterogeneity. The community compositions of the dominant bacterial species were established by analysing a total of 702 isolates from selective agar media by (GTG) 5 -PCR fingerprinting followed by gene sequencing. Most of the isolates belonged to the genera Carnobacterium, Lactobacillus, and Leuconostoc, with Leuconostoc carnosum and Leuconostoc gelidum subsp. gelidum being the most dominant members. The diversity of the dominant bacterial species varied when comparing samples from different production facilities and, in some cases, even within the same product types. Although LAB consistently dominated the microbiota of sliced cooked pork products in the Belgian market, results indicated that bacterial diversity needs to be addressed on the level of product composition and batch variation. Dedicated studies will be needed to substantiate potential links between such variability and microbial composition. For instance, the fact that higher levels of lactobacilli were associated with the presence of potassium lactate (E326) may be suggestive of selective pressure but needs to be validated, as this finding referred to a single product only. Copyright © 2017 Elsevier Ltd. All rights reserved.

Q-nexus: a comprehensive and efficient analysis pipeline designed for ChIP-nexus.

PubMed

Hansen, Peter; Hecht, Jochen; Ibn-Salem, Jonas; Menkuec, Benjamin S; Roskosch, Sebastian; Truss, Matthias; Robinson, Peter N

2016-11-04

ChIP-nexus, an extension of the ChIP-exo protocol, can be used to map the borders of protein-bound DNA sequences at nucleotide resolution, requires less input DNA and enables selective PCR duplicate removal using random barcodes. However, the use of random barcodes requires additional preprocessing of the mapping data, which complicates the computational analysis. To date, only a very limited number of software packages are available for the analysis of ChIP-exo data, which have not yet been systematically tested and compared on ChIP-nexus data. Here, we present a comprehensive software package for ChIP-nexus data that exploits the random barcodes for selective removal of PCR duplicates and for quality control. Furthermore, we developed bespoke methods to estimate the width of the protected region resulting from protein-DNA binding and to infer binding positions from ChIP-nexus data. Finally, we applied our peak calling method as well as the two other methods MACE and MACS2 to the available ChIP-nexus data. The Q-nexus software is efficient and easy to use. Novel statistics about duplication rates in consideration of random barcodes are calculated. Our method for the estimation of the width of the protected region yields unbiased signatures that are highly reproducible for biological replicates and at the same time very specific for the respective factors analyzed. As judged by the irreproducible discovery rate (IDR), our peak calling algorithm shows a substantially better reproducibility. An implementation of Q-nexus is available at http://charite.github.io/Q/ .

Geochemical mapping in polluted floodplains using handheld XRF, geophysical imaging, and geostatistics

NASA Astrophysics Data System (ADS)

Hošek, Michal; Matys Grygar, Tomáš; Popelka, Jan; Kiss, Timea; Elznicová, Jitka; Faměra, Martin

2017-04-01

In the recent years researchers have enjoyed noticeable improvements of portable analytical and geophysical methods, which allow studying floodplain architecture and deciphering pollutant distribution more easily than ever before. Our area of interest was floodplain of the Ploučnice River, particularly a pollution hotspot in Boreček, severely impacted by U mining between the 1970s and late 1980s, in particular a "radioactive flood" in 1981. In the area, we used hand drill coring and in situ (field) analysis of so acquired sediments by handheld X-ray fluorescence spectrometer (XRF), which gave us information about depth profiles of pollutants (Ba, U, Zn) and the Al/Si and Zr/Rb ratios, i.e., proxies for sediment lithology. We found that spatial distribution of pollutants (control by depth and position in the floodplain) is apparently complex and discontinuous. In some places, contamination is buried by a couple decimetres of less polluted sediments, while in other places the peak pollution is near surface, apparently without a straightforward connection with the surface topography and the distance to the river channel. We thus examined the floodplain architecture, the internal structure of the floodplain using two geophysical methods. First of them, dipole electromagnetic profiling (DEMP, also denoted EMP, MP, or Slingram) quickly acquires average electric resistivity in top strata in selected areas, which was actually top 3 m with our particular instrument. Second, electric resistivity tomography (ERT) produces much more detailed information on resistivity with depth resolution of ca 0.5 m to the depth of ca 5 m in selected lines. ERT thus allows identifying boundaries of electric resistivity domains (sediment bodies) and DEMP their spatial distribution. Based on the obtained data, we divided the floodplain to five segments with specific topography, pollution characteristics, and electric resistivity. We suppose that those segments are lithogenetic floodplain units. Those findings must, however, be checked by sediment examination and analysis in selected points. We processed the crucial characteristics obtained by geochemical mapping, namely depth of maximum pollution, amount of contamination, and lithology (Al/Si and Zr/Rb ratios), using geostatistics. Moreover, some parts of floodplain were dated by optically stimulated luminescence (OSL) which revealed, that recycling of top decimetres of floodplain fine fill (silts) in Boreček site has proceeded relatively recently (in decades and centuries) as compared to deeper lying coarser (sandy) strata (millennia). The results of geochemical mapping show complexity of pollution hotspots and need of their integrated interpretation. Key words: Dipole electromagneting profilling, electric resistivity tomography, floodplain contamination, geochemical mapping

Dominant, open nonverbal displays are attractive at zero-acquaintance

PubMed Central

Vacharkulksemsuk, Tanya; Reit, Emily; Khambatta, Poruz; Eastwick, Paul W.; Finkel, Eli J.; Carney, Dana R.

2016-01-01

Across two field studies of romantic attraction, we demonstrate that postural expansiveness makes humans more romantically appealing. In a field study (n = 144 speed-dates), we coded nonverbal behaviors associated with liking, love, and dominance. Postural expansiveness—expanding the body in physical space—was most predictive of attraction, with each one-unit increase in coded behavior from the video recordings nearly doubling a person’s odds of getting a “yes” response from one’s speed-dating partner. In a subsequent field experiment (n = 3,000), we tested the causality of postural expansion (vs. contraction) on attraction using a popular Global Positioning System-based online-dating application. Mate-seekers rapidly flipped through photographs of potential sexual/date partners, selecting those they desired to meet for a date. Mate-seekers were significantly more likely to select partners displaying an expansive (vs. contractive) nonverbal posture. Mediation analyses demonstrate one plausible mechanism through which expansiveness is appealing: Expansiveness makes the dating candidate appear more dominant. In a dating world in which success sometimes is determined by a split-second decision rendered after a brief interaction or exposure to a static photograph, single persons have very little time to make a good impression. Our research suggests that a nonverbal dominance display increases a person’s chances of being selected as a potential mate. PMID:27035937

Dominant, open nonverbal displays are attractive at zero-acquaintance.

PubMed

Vacharkulksemsuk, Tanya; Reit, Emily; Khambatta, Poruz; Eastwick, Paul W; Finkel, Eli J; Carney, Dana R

2016-04-12

Across two field studies of romantic attraction, we demonstrate that postural expansiveness makes humans more romantically appealing. In a field study (n = 144 speed-dates), we coded nonverbal behaviors associated with liking, love, and dominance. Postural expansiveness-expanding the body in physical space-was most predictive of attraction, with each one-unit increase in coded behavior from the video recordings nearly doubling a person's odds of getting a "yes" response from one's speed-dating partner. In a subsequent field experiment (n = 3,000), we tested the causality of postural expansion (vs. contraction) on attraction using a popular Global Positioning System-based online-dating application. Mate-seekers rapidly flipped through photographs of potential sexual/date partners, selecting those they desired to meet for a date. Mate-seekers were significantly more likely to select partners displaying an expansive (vs. contractive) nonverbal posture. Mediation analyses demonstrate one plausible mechanism through which expansiveness is appealing: Expansiveness makes the dating candidate appear more dominant. In a dating world in which success sometimes is determined by a split-second decision rendered after a brief interaction or exposure to a static photograph, single persons have very little time to make a good impression. Our research suggests that a nonverbal dominance display increases a person's chances of being selected as a potential mate.

130. ARAII Administration building (ARA613) vicinity map and plot plan ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

130. ARA-II Administration building (ARA-613) vicinity map and plot plan showing relationship to other existing buildings on site and to ARA-602, to which this building was attached. F.C. Torkelson Comapny 842-area/SL-1-101-U-1. Date: October 1959. Ineel index code no. 070-0101-65-851-150053. - Idaho National Engineering Laboratory, Army Reactors Experimental Area, Scoville, Butte County, ID

Rethinking Chlorophyll Responses To Stress: Fluorescence and Flectance Remote Sensing in a Coastal Environment

DTIC Science & Technology

2010-11-15

fluorescence emission of vegetation for mapping vegetation stress as chlorophyll content and/or carotenoid content changes. 1. REPORT DATE (DD-MM-YYYY...that estimate fluorescence emission of vegetation for mapping vegetation stress as chlorophyll content and/or carotenoid content changes...not related to changes in chlorophyll content or the carotenoids /chlorophyll ratio. PRI is an indicator of chronic salinity stress and may be used as

Evaluation of remote sensing in control of pink bollworm in cotton

NASA Technical Reports Server (NTRS)

Coleman, V. B.; Johnson, C. W.; Lewis, L. N.

1973-01-01

The use of satellite data from the ERTS-1 satellite for mapping the cotton acreage in the southern deserts of California is discussed. The differences between a growing, a defoliated, and a plowed down field can be identified using an optical color combiner. The specific application of the land use maps is to control the spread of the pink bollworms by establishing planting and plowdown dates.

Maps showing abundance and distribution of mercury in rock samples, Medford 1 degree by 2 degrees Quadrangle, Oregon-California

USGS Publications Warehouse

Whittington, Charles L.; Grimes, David J.; Leinz, Reinhard W.

1985-01-01

This map presents data on the abundance and distribution of mercury in 3,146 rock samples from the Medford quadrangle. Most of the rock samples were collected incidental to geologic, geochemical, and mineral resources studies in the period from 1974 to 1980, but about 6 percent date from earlier investigations (Wells, 1940; 1956; Wells and others 1949). 

Aggregation of Sentinel-2 time series classifications as a solution for multitemporal analysis

NASA Astrophysics Data System (ADS)

Lewiński, Stanislaw; Nowakowski, Artur; Malinowski, Radek; Rybicki, Marcin; Kukawska, Ewa; Krupiński, Michał

2017-10-01

The general aim of this work was to elaborate efficient and reliable aggregation method that could be used for creating a land cover map at a global scale from multitemporal satellite imagery. The study described in this paper presents methods for combining results of land cover/land use classifications performed on single-date Sentinel-2 images acquired at different time periods. For that purpose different aggregation methods were proposed and tested on study sites spread on different continents. The initial classifications were performed with Random Forest classifier on individual Sentinel-2 images from a time series. In the following step the resulting land cover maps were aggregated pixel by pixel using three different combinations of information on the number of occurrences of a certain land cover class within a time series and the posterior probability of particular classes resulting from the Random Forest classification. From the proposed methods two are shown superior and in most cases were able to reach or outperform the accuracy of the best individual classifications of single-date images. Moreover, the aggregations results are very stable when used on data with varying cloudiness. They also enable to reduce considerably the number of cloudy pixels in the resulting land cover map what is significant advantage for mapping areas with frequent cloud coverage.

Ubiquitin-coated nanodiamonds bind to autophagy receptors for entry into the selective autophagy pathway

PubMed Central

Liu, Kuang-Kai; Qiu, Wei-Ru; Naveen Raj, Emmanuel; Liu, Huei-Fang; Huang, Hou-Syun; Lin, Yu-Wei; Chang, Chien-Jen; Chen, Ting-Hua; Chen, Chinpiao; Chang, Huan-Cheng; Hwang, Jenn-Kang; Chao, Jui-I

2017-01-01

ABSTRACT Selective macroautophagy/autophagy plays a pivotal role in the processing of foreign pathogens and cellular components to maintain homeostasis in human cells. To date, numerous studies have demonstrated the uptake of nanoparticles by cells, but their intracellular processing through selective autophagy remains unclear. Here we show that carbon-based nanodiamonds (NDs) coated with ubiquitin (Ub) bind to autophagy receptors (SQSTM1 [sequestosome 1], OPTN [optineurin], and CALCOCO2/NDP52 [calcium binding and coiled-coil domain 2]) and are then linked to MAP1LC3/LC3 (microtubule-associated protein 1 light chain 3) for entry into the selective autophagy pathway. NDs are ultimately delivered to lysosomes. Ectopically expressed SQSTM1-green fluorescence protein (GFP) could bind to the Ub-coated NDs. By contrast, the Ub-associated domain mutant of SQSTM1 (ΔUBA)-GFP did not bind to the Ub-coated NDs. Chloroquine, an autophagy inhibitor, prevented the ND-containing autophagosomes from fusing with lysosomes. Furthermore, autophagy receptors OPTN and CALCOCO2/NDP52, involved in the processing of bacteria, were found to be involved in the selective autophagy of NDs. However, ND particles located in the lysosomes of cells did not induce mitotic blockage, senescence, or cell death. Single ND clusters in the lysosomes of cells were observed in the xenografted human lung tumors of nude mice. This study demonstrated for the first time that Ub-coated nanoparticles bind to autophagy receptors for entry into the selective autophagy pathway, facilitating their delivery to lysosomes. PMID:27846374

Feasibility of Multispectral Airborne Laser Scanning for Land Cover Classification, Road Mapping and Map Updating

NASA Astrophysics Data System (ADS)

Matikainen, L.; Karila, K.; Hyyppä, J.; Puttonen, E.; Litkey, P.; Ahokas, E.

2017-10-01

This article summarises our first results and experiences on the use of multispectral airborne laser scanner (ALS) data. Optech Titan multispectral ALS data over a large suburban area in Finland were acquired on three different dates in 2015-2016. We investigated the feasibility of the data from the first date for land cover classification and road mapping. Object-based analyses with segmentation and random forests classification were used. The potential of the data for change detection of buildings and roads was also demonstrated. The overall accuracy of land cover classification results with six classes was 96 % compared with validation points. The data also showed high potential for road detection, road surface classification and change detection. The multispectral intensity information appeared to be very important for automated classifications. Compared to passive aerial images, the intensity images have interesting advantages, such as the lack of shadows. Currently, we focus on analyses and applications with the multitemporal multispectral data. Important questions include, for example, the potential and challenges of the multitemporal data for change detection.

Market Research: Better Documentation Needed to Inform Future Procurements at Selected Agencies

DTIC Science & Technology

2014-10-01

MARKET RESEARCH Better Documentation Needed to Inform Future Procurements at Selected Agencies Report to the...currently valid OMB control number. 1. REPORT DATE OCT 2014 2. REPORT TYPE 3. DATES COVERED 00-00-2014 to 00-00-2014 4. TITLE AND SUBTITLE Market ...2014 MARKET RESEARCH Better Documentation Needed to Inform Future Procurements at Selected Agencies is Why GAO Did This Study The federal

Reconnaissance geologic map of part of the San Isidro Quadrangle, Baja California Sur, Mexico

USGS Publications Warehouse

McLean, Hugh; Hausback, B.P.; Knapp, J.H.

1985-01-01

Mapping was done on aerial photographs and transferred, where possible, to 1:50,000-scale topographic base maps. Areas with roads were field checked; however, in the northeast part of the map area, lack of roads prevented field checks. Previous geologic surveys of parts of the map area were made by horseback in the early 1920's; reports were published by Darton (1921), Heim (1922), and Beal (1948). Subsurface data from petroleum exploration and a geologic map were incorporated in a regional study by Mina (1957). The first radiometric ages of rocks from the map area were published by Gastil and others (1979). Recently determined radiometric ages and chemical analysis of volcanic rocks were reported by Hausback (1984) and by Sawlan and Smith (1984). Our study incorporates geologic mapping with age control based on new radiometric ages as well as paleontology, Flows and tuffs were dated by the K-Ar method. Fossil ages are based on diatom and mollusk assemblages.

Mapping Resource Selection Functions in Wildlife Studies: Concerns and Recommendations

PubMed Central

Morris, Lillian R.; Proffitt, Kelly M.; Blackburn, Jason K.

2018-01-01

Predicting the spatial distribution of animals is an important and widely used tool with applications in wildlife management, conservation, and population health. Wildlife telemetry technology coupled with the availability of spatial data and GIS software have facilitated advancements in species distribution modeling. There are also challenges related to these advancements including the accurate and appropriate implementation of species distribution modeling methodology. Resource Selection Function (RSF) modeling is a commonly used approach for understanding species distributions and habitat usage, and mapping the RSF results can enhance study findings and make them more accessible to researchers and wildlife managers. Currently, there is no consensus in the literature on the most appropriate method for mapping RSF results, methods are frequently not described, and mapping approaches are not always related to accuracy metrics. We conducted a systematic review of the RSF literature to summarize the methods used to map RSF outputs, discuss the relationship between mapping approaches and accuracy metrics, performed a case study on the implications of employing different mapping methods, and provide recommendations as to appropriate mapping techniques for RSF studies. We found extensive variability in methodology for mapping RSF results. Our case study revealed that the most commonly used approaches for mapping RSF results led to notable differences in the visual interpretation of RSF results, and there is a concerning disconnect between accuracy metrics and mapping methods. We make 5 recommendations for researchers mapping the results of RSF studies, which are focused on carefully selecting and describing the method used to map RSF studies, and relating mapping approaches to accuracy metrics. PMID:29887652

Dark Energy Survey Year 1 results: curved-sky weak lensing mass map

NASA Astrophysics Data System (ADS)

Chang, C.; Pujol, A.; Mawdsley, B.; Bacon, D.; Elvin-Poole, J.; Melchior, P.; Kovács, A.; Jain, B.; Leistedt, B.; Giannantonio, T.; Alarcon, A.; Baxter, E.; Bechtol, K.; Becker, M. R.; Benoit-Lévy, A.; Bernstein, G. M.; Bonnett, C.; Busha, M. T.; Rosell, A. Carnero; Castander, F. J.; Cawthon, R.; da Costa, L. N.; Davis, C.; De Vicente, J.; DeRose, J.; Drlica-Wagner, A.; Fosalba, P.; Gatti, M.; Gaztanaga, E.; Gruen, D.; Gschwend, J.; Hartley, W. G.; Hoyle, B.; Huff, E. M.; Jarvis, M.; Jeffrey, N.; Kacprzak, T.; Lin, H.; MacCrann, N.; Maia, M. A. G.; Ogando, R. L. C.; Prat, J.; Rau, M. M.; Rollins, R. P.; Roodman, A.; Rozo, E.; Rykoff, E. S.; Samuroff, S.; Sánchez, C.; Sevilla-Noarbe, I.; Sheldon, E.; Troxel, M. A.; Varga, T. N.; Vielzeuf, P.; Vikram, V.; Wechsler, R. H.; Zuntz, J.; Abbott, T. M. C.; Abdalla, F. B.; Allam, S.; Annis, J.; Bertin, E.; Brooks, D.; Buckley-Geer, E.; Burke, D. L.; Kind, M. Carrasco; Carretero, J.; Crocce, M.; Cunha, C. E.; D'Andrea, C. B.; Desai, S.; Diehl, H. T.; Dietrich, J. P.; Doel, P.; Estrada, J.; Neto, A. Fausti; Fernandez, E.; Flaugher, B.; Frieman, J.; García-Bellido, J.; Gruendl, R. A.; Gutierrez, G.; Honscheid, K.; James, D. J.; Jeltema, T.; Johnson, M. W. G.; Johnson, M. D.; Kent, S.; Kirk, D.; Krause, E.; Kuehn, K.; Kuhlmann, S.; Lahav, O.; Li, T. S.; Lima, M.; March, M.; Martini, P.; Menanteau, F.; Miquel, R.; Mohr, J. J.; Neilsen, E.; Nichol, R. C.; Petravick, D.; Plazas, A. A.; Romer, A. K.; Sako, M.; Sanchez, E.; Scarpine, V.; Schubnell, M.; Smith, M.; Smith, R. C.; Soares-Santos, M.; Sobreira, F.; Suchyta, E.; Tarle, G.; Thomas, D.; Tucker, D. L.; Walker, A. R.; Wester, W.; Zhang, Y.

2018-04-01

We construct the largest curved-sky galaxy weak lensing mass map to date from the DES first-year (DES Y1) data. The map, about 10 times larger than the previous work, is constructed over a contiguous ≈1500 deg2, covering a comoving volume of ≈10 Gpc3. The effects of masking, sampling, and noise are tested using simulations. We generate weak lensing maps from two DES Y1 shear catalogues, METACALIBRATION and IM3SHAPE, with sources at redshift 0.2 < z < 1.3, and in each of four bins in this range. In the highest signal-to-noise map, the ratio between the mean signal to noise in the E-mode map and the B-mode map is ˜1.5 (˜2) when smoothed with a Gaussian filter of σG = 30 (80) arcmin. The second and third moments of the convergence κ in the maps are in agreement with simulations. We also find no significant correlation of κ with maps of potential systematic contaminants. Finally, we demonstrate two applications of the mass maps: (1) cross-correlation

Automating the selection of standard parallels for conic map projections

NASA Astrophysics Data System (ADS)

Šavriǒ, Bojan; Jenny, Bernhard

2016-05-01

Conic map projections are appropriate for mapping regions at medium and large scales with east-west extents at intermediate latitudes. Conic projections are appropriate for these cases because they show the mapped area with less distortion than other projections. In order to minimize the distortion of the mapped area, the two standard parallels of conic projections need to be selected carefully. Rules of thumb exist for placing the standard parallels based on the width-to-height ratio of the map. These rules of thumb are simple to apply, but do not result in maps with minimum distortion. There also exist more sophisticated methods that determine standard parallels such that distortion in the mapped area is minimized. These methods are computationally expensive and cannot be used for real-time web mapping and GIS applications where the projection is adjusted automatically to the displayed area. This article presents a polynomial model that quickly provides the standard parallels for the three most common conic map projections: the Albers equal-area, the Lambert conformal, and the equidistant conic projection. The model defines the standard parallels with polynomial expressions based on the spatial extent of the mapped area. The spatial extent is defined by the length of the mapped central meridian segment, the central latitude of the displayed area, and the width-to-height ratio of the map. The polynomial model was derived from 3825 maps-each with a different spatial extent and computationally determined standard parallels that minimize the mean scale distortion index. The resulting model is computationally simple and can be used for the automatic selection of the standard parallels of conic map projections in GIS software and web mapping applications.

Use of multi-date Landsat TM imagery to map eastern hemlock (Tsuga canadensis) decline due to hemlock woolly adelgid (Adelges tsugae) in Shenandoah National Park

Treesearch

David D. Morton; John A. Young; Nissa M. Thomsen

2000-01-01

Hemlock woolly adelgid (HWA) was first observed in Shenandoah National Park (SNP) in the mid-1980s. Since then, this exotic insect has expanded its range throughout the park. Most stands were heavily defoliated within several years of infestation. However, several hemlock stands appear to be not affected or only moderately affected to the present date. To investigate...

New leads for selective GSK-3 inhibition: pharmacophore mapping and virtual screening studies.

PubMed

Patel, Dhilon S; Bharatam, Prasad V

2006-01-01

Glycogen Synthase Kinase-3 is a regulatory serine/threonine kinase, which is being targeted for the treatment of a number of human diseases including type-2 diabetes mellitus, neurodegenerative diseases, cancer and chronic inflammation. Selective GSK-3 inhibition is an important requirement owing to the possibility of side effects arising from other kinases. A pharmacophore mapping strategy is employed in this work to identify new leads for selective GSK-3 inhibition. Ligands known to show selective GSK-3 inhibition were employed in generating a pharmacophore map using distance comparison method (DISCO). The derived pharmacophore map was validated using (i) important interactions involved in selective GSK-3 inhibitions, and (ii) an in-house database containing different classes of GSK-3 selective, non-selective and inactive molecules. New Lead identification was carried out by performing virtual screening using validated pharmacophoric query and three chemical databases namely NCI, Maybridge and Leadquest. Further data reduction was carried out by employing virtual filters based on (i) Lipinski's rule of 5 (ii) van der Waals bumps and (iii) restricting the number of rotatable bonds to seven. Final screening was carried out using FlexX based molecular docking study.

New leads for selective GSK-3 inhibition: pharmacophore mapping and virtual screening studies

NASA Astrophysics Data System (ADS)

Patel, Dhilon S.; Bharatam, Prasad V.

2006-01-01

Glycogen Synthase Kinase-3 is a regulatory serine/threonine kinase, which is being targeted for the treatment of a number of human diseases including type-2 diabetes mellitus, neurodegenerative diseases, cancer and chronic inflammation. Selective GSK-3 inhibition is an important requirement owing to the possibility of side effects arising from other kinases. A pharmacophore mapping strategy is employed in this work to identify new leads for selective GSK-3 inhibition. Ligands known to show selective GSK-3 inhibition were employed in generating a pharmacophore map using distance comparison method (DISCO). The derived pharmacophore map was validated using (i) important interactions involved in selective GSK-3 inhibitions, and (ii) an in-house database containing different classes of GSK-3 selective, non-selective and inactive molecules. New Lead identification was carried out by performing virtual screening using validated pharmacophoric query and three chemical databases namely NCI, Maybridge and Leadquest. Further data reduction was carried out by employing virtual filters based on (i) Lipinski's rule of 5 (ii) van der Waals bumps and (iii) restricting the number of rotatable bonds to seven. Final screening was carried out using FlexX based molecular docking study.

Paleoglaciology of the Tian Shan and Altai Mountains, Central Asia

NASA Astrophysics Data System (ADS)

Blomdin, Robin

Central Asia is home to some of the highest and most spectacular mountain ranges in the world, including the Tian Shan and Altai Mountains, and plays a major role in global and regional climate and hydrology. Understanding the glacial history of this vast region is important for several reasons, but in particular there is a general lack of paleoclimatic data from this highly continental region, at the confluence of major climate systems, and glaciers are sensitive monitors of climate change. This thesis examines the pattern and history of glacial deposition and erosion in the Tian Shan and Altai Mountains using a combined approach including 1) geomorphological mapping, 2) spatial analysis of glacial geomorphology, 3) hypsometry, 4) Equilibrium Line Altitudes (ELA), and 5) 10Be exposure dating of erratic boulders on glacial landforms. Preliminary mapping of the Altai Mountains suggests the area mainly experienced alpine style glaciations, with glacial centers as ice caps and ice fields located around the higher mountainous areas. This is consistent with previous work on the Tian Shan. For the Tian Shan we have new apparent minimum 10Be exposure ages from ~0.2 ka to ~ 180 ka, with large site-specific scatter. Most of our apparent exposure ages come from boulders with an age range between 30 ka to 0.2 ka. Although we recognize that more studies combining mapping, dating and modeling are needed to understand the full history of past glaciation in this region, our conclusions to date include: 1) The oldest recorded glacial event occurred in the Taragay Basin in the Tian Shan, dated to 92.1+/-11.4 ka, and two MIS 2 glacial advances have been recorded on opposite sides of the Ak-Shyrak Range, dated to 16.0+/-3.4 and 17.3+/-4.7 ka respectively. 2) Remote-sensing-based mapping and cosmogenic nuclide dating indicate that Pleistocene glaciations were restricted to the mountains and plateau areas of the Tian Shan. 3) Glaciation ages indicate that glacial events occurred during, MIS 2, 3 and 5. 4) There are no regional spatial trends in changes in ELA (DeltaELA) however, when comparing the distribution of ELAs to the hypsometric signature (area elevation relationship) of individual catchments across the Tian Shan, there is a range of cases from valleys experiencing "typical" or "extensive" modes of glaciation, where paleo ELAs coincide with hypsometric maxima (peaks in area-elevation curves), to valleys with more complicated signatures, either reflecting "dynamic" or "limited" glaciations at H MAX. This suggests that in future work "typical" catchments should be targeted for geochronological studies and paleo-ELA reconstructions. 5) Finally, when comparing deglaciation ages to global and regional climate records we observe both northern hemispheric and monsoonal signatures as potential drivers behind glacial expansions in the Tian Shan.

Detecting and Quantifying Topography in Neural Maps

PubMed Central

Yarrow, Stuart; Razak, Khaleel A.; Seitz, Aaron R.; Seriès, Peggy

2014-01-01

Topographic maps are an often-encountered feature in the brains of many species, yet there are no standard, objective procedures for quantifying topography. Topographic maps are typically identified and described subjectively, but in cases where the scale of the map is close to the resolution limit of the measurement technique, identifying the presence of a topographic map can be a challenging subjective task. In such cases, an objective topography detection test would be advantageous. To address these issues, we assessed seven measures (Pearson distance correlation, Spearman distance correlation, Zrehen's measure, topographic product, topological correlation, path length and wiring length) by quantifying topography in three classes of cortical map model: linear, orientation-like, and clusters. We found that all but one of these measures were effective at detecting statistically significant topography even in weakly-ordered maps, based on simulated noisy measurements of neuronal selectivity and sparse sampling of the maps. We demonstrate the practical applicability of these measures by using them to examine the arrangement of spatial cue selectivity in pallid bat A1. This analysis shows that significantly topographic arrangements of interaural intensity difference and azimuth selectivity exist at the scale of individual binaural clusters. PMID:24505279

Large-Scale, High-Resolution Neurophysiological Maps Underlying fMRI of Macaque Temporal Lobe

PubMed Central

Papanastassiou, Alex M.; DiCarlo, James J.

2013-01-01

Maps obtained by functional magnetic resonance imaging (fMRI) are thought to reflect the underlying spatial layout of neural activity. However, previous studies have not been able to directly compare fMRI maps to high-resolution neurophysiological maps, particularly in higher level visual areas. Here, we used a novel stereo microfocal x-ray system to localize thousands of neural recordings across monkey inferior temporal cortex (IT), construct large-scale maps of neuronal object selectivity at subvoxel resolution, and compare those neurophysiology maps with fMRI maps from the same subjects. While neurophysiology maps contained reliable structure at the sub-millimeter scale, fMRI maps of object selectivity contained information at larger scales (>2.5 mm) and were only partly correlated with raw neurophysiology maps collected in the same subjects. However, spatial smoothing of neurophysiology maps more than doubled that correlation, while a variety of alternative transforms led to no significant improvement. Furthermore, raw spiking signals, once spatially smoothed, were as predictive of fMRI maps as local field potential signals. Thus, fMRI of the inferior temporal lobe reflects a spatially low-passed version of neurophysiology signals. These findings strongly validate the widespread use of fMRI for detecting large (>2.5 mm) neuronal domains of object selectivity but show that a complete understanding of even the most pure domains (e.g., faces vs nonface objects) requires investigation at fine scales that can currently only be obtained with invasive neurophysiological methods. PMID:24048850

Integrating multisource imagery and GIS analysis for mapping Bermuda`s benthic habitats

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vierros, M.K.

1997-06-01

Bermuda is a group of isolated oceanic situated in the northwest Atlantic Ocean and surrounded by the Sargasso Sea. Bermuda possesses the northernmost coral reefs and mangroves in the Atlantic Ocean, and because of its high population density, both the terrestrial and marine environments are under intense human pressure. Although a long record of scientific research exists, this study is the first attempt to comprehensively map the area`s benthic habitats, despite the need for such a map for resource assessment and management purposes. Multi-source and multi-date imagery were used for producing the habitat map due to lack of a completemore » up-to-date image. Classifications were performed with SPOT data, and the results verified from recent aerial photography and current aerial video, along with extensive ground truthing. Stratification of the image into regions prior to classification reduced the confusing effects of varying water depth. Classification accuracy in shallow areas was increased by derivation of a texture pseudo-channel, while bathymetry was used as a classification tool in deeper areas, where local patterns of zonation were well known. Because of seasonal variation in extent of seagrasses, a classification scheme based on density could not be used. Instead, a set of classes based on the seagrass area`s exposure to the open ocean were developed. The resulting habitat map is currently being assessed for accuracy with promising preliminary results, indicating its usefulness as a basis for future resource assessment studies.« less

Locating Sequence on FPC Maps and Selecting a Minimal Tiling Path

PubMed Central

Engler, Friedrich W.; Hatfield, James; Nelson, William; Soderlund, Carol A.

2003-01-01

This study discusses three software tools, the first two aid in integrating sequence with an FPC physical map and the third automatically selects a minimal tiling path given genomic draft sequence and BAC end sequences. The first tool, FSD (FPC Simulated Digest), takes a sequenced clone and adds it back to the map based on a fingerprint generated by an in silico digest of the clone. This allows verification of sequenced clone positions and the integration of sequenced clones that were not originally part of the FPC map. The second tool, BSS (Blast Some Sequence), takes a query sequence and positions it on the map based on sequence associated with the clones in the map. BSS has multiple uses as follows: (1) When the query is a file of marker sequences, they can be added as electronic markers. (2) When the query is draft sequence, the results of BSS can be used to close gaps in a sequenced clone or the physical map. (3) When the query is a sequenced clone and the target is BAC end sequences, one may select the next clone for sequencing using both sequence comparison results and map location. (4) When the query is whole-genome draft sequence and the target is BAC end sequences, the results can be used to select many clones for a minimal tiling path at once. The third tool, pickMTP, automates the majority of this last usage of BSS. Results are presented using the rice FPC map, BAC end sequences, and whole-genome shotgun from Syngenta. PMID:12915486

The Structure Of The Gaia Deployable Sunshield Assembly

NASA Astrophysics Data System (ADS)

Pereira, Carlos; Urgoiti, Eduardo; Pinto, Inaki

2012-07-01

GAIA is an ESA mission with launch date in 2013. Its main objective is to map the stars. After launch it will unfold a 10.2 m diameter sunshield .The structure of this shield consists of twelve 3.5 meter long composite trusses which act as scaffold to two multilayer insulation blankets. Due to thermal stability constraints the planarity of the shield must be better than 1.0 mm. The trusses are therefore lightweight structures capable of withstanding the launch loads and once deployed, the thermal environment of the spacecraft with a minimum of distortion. This paper details: • The material selection for the composite structure • Validation of the chosen materials and truss layout • The modification of manufacturing process in order to lightweight the structure • The extensive structural and thermal stability testing The sunshield has been delivered to the satellite prime after successful mechanical, thermal and deployment tests.

Preliminary Quantification of Image Color Gradient on Genesis Concentrator Silicon Carbine Target 60001

NASA Technical Reports Server (NTRS)

Allton, J. H.; Calaway, M. J.; Rodriquez, M. C.

2008-01-01

The Genesis spacecraft concentrator was a device to focus solar wind ions onto a 6-cm diameter target area, thus concentrating the solar wind by 20X [1]. The target area was comprised of 4 quadrants held in place by a gold-coated stainless steel "cross" (Fig. 1). To date, two SiC and one chemical vapor deposited (CVD) quadrants have been imaged at 5X using a Leica DM-6000M in autoscan mode. Complete imaging of SiC sample 60001 required 1036 images. The mosaic of images is shown in Fig. 2 and position of analyzed areas in Fig. 3. This mosaic imaging is part of the curatorial documentation of surface condition and mapping of contamination. Higher magnification (50X) images of selected areas of the target and individual contaminant particles are compiled into reports which may be requested from the Genesis Curator [2].

Experience real-time climate change: Environmental education at Jamtal glacier.

NASA Astrophysics Data System (ADS)

Fischer, Andrea; Seiser, Bernd; Hartl, Lea; Bendler, Gebhard

2016-04-01

Kids hear about climate change in everyday news, but, unlike grown-ups, they find it much harder to imagine changes over decades, i.e. much longer than their own life span. So how to teach them the issues of climate change? Jamtalferner is an Alpine glacier with an ongoing mass balance monitoring programme started in 1988/89. Surveys of glacier length changes by the Austrian Alpine Club date back even longer, so that the glacier retreat after the Little Ice Age is well documented. As the glacier is easy to access, at just one hour's easy walk from the mountain hut, Jamtalferner was selected to compile materials on climate change for the use in schools and for preparing excursions for a hands-on confrontation with climate change and to give an impression of decadal changes. The materials will be available at www.umweltbildung-jamtal.info and include time series of photographs, maps, tables, background information and exercises.

Laser megajoule 1.06-μm mirror production with very high laser damage threshold

NASA Astrophysics Data System (ADS)

Pinot, B.; Leplan, Herve; Houbre, Francois; Lavastre, Eric; Poncetta, Jean-Christophe; Chabassier, Genevieve

2002-03-01

As part of the LMJ (Laser Megajoule) program, CEA is building the LIL laser with full size optics and LMJ requirements. SAGEM has been selected as the supplier of large optical components and coatings with very high laser- induced damage threshold. Including spare parts, about 100 mirrors 610*430 mm2 with LIDT-3ns>25 J/cm2 have to be produced. Using a 5 m3 vacuum chamber and the 100 J/cm2 mirror coating process developed at CEA-LETI, with Hafnium and SiO2 materials, we are now typically in a serial production phase. To date, about thirty mirrors have been delivered. This paper focuses on the acceptance tests performed after coating, at SAGEM then CEA: LIDT measurement and Raster-Scan on samples; reflectance mapping on CEA automatic photometer; reflected wavefront deformation with \

Existence of Lipschitz selections of the Steiner map

NASA Astrophysics Data System (ADS)

Bednov, B. B.; Borodin, P. A.; Chesnokova, K. V.

2018-02-01

This paper is concerned with the problem of the existence of Lipschitz selections of the Steiner map {St}_n, which associates with n points of a Banach space X the set of their Steiner points. The answer to this problem depends on the geometric properties of the unit sphere S(X) of X, its dimension, and the number n. For n≥slant 4 general conditions are obtained on the space X under which {St}_n admits no Lipschitz selection. When X is finite dimensional it is shown that, if n≥slant 4 is even, the map {St}_n has a Lipschitz selection if and only if S(X) is a finite polytope; this is not true if n≥slant 3 is odd. For n=3 the (single-valued) map {St}_3 is shown to be Lipschitz continuous in any smooth strictly-convex two-dimensional space; this ceases to be true in three-dimensional spaces. Bibliography: 21 titles.

Metabolome based volatiles profiling in 13 date palm fruit varieties from Egypt via SPME GC-MS and chemometrics.

PubMed

Khalil, Mohammed N A; Fekry, Mostafa I; Farag, Mohamed A

2017-02-15

Dates (Phoenix dactylifera L.) are distributed worldwide as major food complement providing a source of sugars and dietary fiber as well as macro- and micronutrients. Although phytochemical analyses of date fruit non-volatile metabolites have been reported, much less is known about the aroma given off by the fruit, which is critical for dissecting sensory properties and quality traits. Volatile constituents from 13 date varieties grown in Egypt were profiled using SPME-GCMS coupled to multivariate data analysis to explore date fruit aroma composition and investigate potential future uses by food industry. A total of 89 volatiles were identified where lipid-derived volatiles and phenylpropanoid derivatives were the major components of date fruit aroma. Multivariate data analyses revealed that 2,3-butanediol, hexanal, hexanol and cinnamaldehyde contributed the most to classification of different varieties. This study provides the most complete map of volatiles in Egyptian date fruit, with Siwi and Sheshi varieties exhibiting the most distinct aroma among studied date varieties. Copyright © 2016 Elsevier Ltd. All rights reserved.

Publications of the Volcano Hazards Program 2014

USGS Publications Warehouse

Nathenson, Manuel

2016-04-08

Only published papers and maps are included here; abstracts presented at scientific meetings are omitted. Publication dates are based on year of issue, with no attempt to assign them to a fiscal year.

Publications of the Volcano Hazards Program 2013

USGS Publications Warehouse

Nathenson, Manuel

2015-01-01

Only published papers and maps are included here; abstracts presented at scientific meetings are omitted. Publication dates are based on year of issue, with no attempt to assign them to a fiscal year.

Remote sensing in Iowa agriculture. [land use, crop identification, and soil mapping

NASA Technical Reports Server (NTRS)

Mahlstede, J. P. (Principal Investigator); Carlson, R. E.; Fenton, T. E.

1974-01-01

The author has identified the following significant results. Analysis of 1972 single-date coverage indicated that a complete crop classification was not attainable at the test sites. Good multi-date coverage during 1973 indicates that many of the problems encountered in 1972 will be minimized. In addition, the compilation of springtime imagery covering the entire state of Iowa has added a new dimension to interpretation of Iowa's natural resources. ERTS-1 has provided data necessary to achieve the broad synoptic view not attainable through other means. This should provide soils and crop researchers and land use planners a base map of Iowa. Granted and due to the resolution of ERTS-1, not all details are observable for many land use planning needs, but this gives a general and current view of Iowa.

Thematic Accuracy Assessment of the 2011 National Land ...

EPA Pesticide Factsheets

Accuracy assessment is a standard protocol of National Land Cover Database (NLCD) mapping. Here we report agreement statistics between map and reference labels for NLCD 2011, which includes land cover for ca. 2001, ca. 2006, and ca. 2011. The two main objectives were assessment of agreement between map and reference labels for the three, single-date NLCD land cover products at Level II and Level I of the classification hierarchy, and agreement for 17 land cover change reporting themes based on Level I classes (e.g., forest loss; forest gain; forest, no change) for three change periods (2001–2006, 2006–2011, and 2001–2011). The single-date overall accuracies were 82%, 83%, and 83% at Level II and 88%, 89%, and 89% at Level I for 2011, 2006, and 2001, respectively. Many class-specific user's accuracies met or exceeded a previously established nominal accuracy benchmark of 85%. Overall accuracies for 2006 and 2001 land cover components of NLCD 2011 were approximately 4% higher (at Level II and Level I) than the overall accuracies for the same components of NLCD 2006. The high Level I overall, user's, and producer's accuracies for the single-date eras in NLCD 2011 did not translate into high class-specific user's and producer's accuracies for many of the 17 change reporting themes. User's accuracies were high for the no change reporting themes, commonly exceeding 85%, but were typically much lower for the reporting themes that represented change. Only forest l

Velocity selection in coupled-map lattices

NASA Astrophysics Data System (ADS)

Parekh, Nita; Puri, Sanjay

1993-02-01

We investigate the phenomenon of velocity selection for traveling wave fronts in a class of coupled-map lattices, derived by discretizations of the Fisher equation [Ann. Eugenics 7, 355 (1937)]. We find that the velocity selection can be understood in terms of a discrete analog of the marginal-stability hypothesis. A perturbative approach also enables us to estimate the selected velocity accurately for small values of the discretization mesh sizes.

A high-density SNP genetic linkage map for the silver-lipped pearl oyster, Pinctada maxima: a valuable resource for gene localisation and marker-assisted selection.

PubMed

Jones, David B; Jerry, Dean R; Khatkar, Mehar S; Raadsma, Herman W; Zenger, Kyall R

2013-11-20

The silver-lipped pearl oyster, Pinctada maxima, is an important tropical aquaculture species extensively farmed for the highly sought "South Sea" pearls. Traditional breeding programs have been initiated for this species in order to select for improved pearl quality, but many economic traits under selection are complex, polygenic and confounded with environmental factors, limiting the accuracy of selection. The incorporation of a marker-assisted selection (MAS) breeding approach would greatly benefit pearl breeding programs by allowing the direct selection of genes responsible for pearl quality. However, before MAS can be incorporated, substantial genomic resources such as genetic linkage maps need to be generated. The construction of a high-density genetic linkage map for P. maxima is not only essential for unravelling the genomic architecture of complex pearl quality traits, but also provides indispensable information on the genome structure of pearl oysters. A total of 1,189 informative genome-wide single nucleotide polymorphisms (SNPs) were incorporated into linkage map construction. The final linkage map consisted of 887 SNPs in 14 linkage groups, spans a total genetic distance of 831.7 centimorgans (cM), and covers an estimated 96% of the P. maxima genome. Assessment of sex-specific recombination across all linkage groups revealed limited overall heterochiasmy between the sexes (i.e. 1.15:1 F/M map length ratio). However, there were pronounced localised differences throughout the linkage groups, whereby male recombination was suppressed near the centromeres compared to female recombination, but inflated towards telomeric regions. Mean values of LD for adjacent SNP pairs suggest that a higher density of markers will be required for powerful genome-wide association studies. Finally, numerous nacre biomineralization genes were localised providing novel positional information for these genes. This high-density SNP genetic map is the first comprehensive linkage map for any pearl oyster species. It provides an essential genomic tool facilitating studies investigating the genomic architecture of complex trait variation and identifying quantitative trait loci for economically important traits useful in genetic selection programs within the P. maxima pearling industry. Furthermore, this map provides a foundation for further research aiming to improve our understanding of the dynamic process of biomineralization, and pearl oyster evolution and synteny.

National Maps - Pacific - NOAA's National Weather Service

Science.gov Websites

select the go button to submit request City, St Go Sign-up for Email Alerts RSS Feeds RSS Feeds Warnings Skip Navigation Links weather.gov NOAA logo-Select to go to the NOAA homepage National Oceanic and Atmospheric Administration's Select to go to the NWS homepage National Weather Service Site Map News

An evaluation of time-series MODIS 250-meter vegetation index data for crop mapping in the United States Central Great Plains

NASA Astrophysics Data System (ADS)

Wardlow, Brian Douglas

The objectives of this research were to: (1) investigate time-series MODIS (Moderate Resolution Imaging Spectroradiometer) 250-meter EVI (Enhanced Vegetation Index) and NDVI (Normalized Difference Vegetation Index) data for regional-scale crop-related land use/land cover characterization in the U.S. Central Great Plains and (2) develop and test a MODIS-based crop mapping protocol. A pixel-level analysis of the time-series MODIS 250-m VIs for 2,000+ field sites across Kansas found that unique spectral-temporal signatures were detected for the region's major crop types, consistent with the crops' phenology. Intra-class variations were detected in VI data associated with different land use practices, climatic conditions, and planting dates for the crops. The VIs depicted similar seasonal variations and were highly correlated. A pilot study in southwest Kansas found that accurate and detailed cropping patterns could be mapped using the MODIS 250-m VI data. Overall and class-specific accuracies were generally greater than 90% for mapping crop/non-crop, general crops (alfalfa, summer crops, winter wheat, and fallow), summer crops (corn, sorghum, and soybeans), and irrigated/non-irrigated crops using either VI dataset. The classified crop areas also had a high level of agreement (<5% difference) with the USDA reported crop areas. Both VIs produced comparable crop maps with only a 1-2% difference between their classification accuracies and a high level of pixel-level agreement (>90%) between their classified crop patterns. This hierarchical crop mapping protocol was tested for Kansas and produced similar classification results over a larger and more diverse area. Overall and class-specific accuracies were typically between 85% and 95% for the crop maps. At the state level, the maps had a high level of areal agreement (<5% difference) with the USDA crop area figures and their classified patterns were consistent with the state's cropping practices. In general, the protocol's performance was relatively consistent across the state's range of environmental conditions, landscape patterns, and cropping practices. The largest areal differences occurred in eastern Kansas due to the omission of many small cropland areas that were not resolvable at MODIS' 250-m resolution. Notable regional deviations in classified areas also occurred for selected classes due to localized precipitation patterns and specific cropping practices.

The GIS map coloring support decision-making system based on case-based reasoning and simulated annealing algorithm

NASA Astrophysics Data System (ADS)

Deng, Shuang; Xiang, Wenting; Tian, Yangge

2009-10-01

Map coloring is a hard task even to the experienced map experts. In the GIS project, usually need to color map according to the customer, which make the work more complex. With the development of GIS, more and more programmers join the project team, which lack the training of cartology, their coloring map are harder to meet the requirements of customer. From the experience, customers with similar background usually have similar tastes for coloring map. So, we developed a GIS color scheme decision-making system which can select color schemes of similar customers from case base for customers to select and adjust. The system is a BS/CS mixed system, the client side use JSP and make it possible for the system developers to go on remote calling of the colors scheme cases in the database server and communicate with customers. Different with general case-based reasoning, even the customers are very similar, their selection may have difference, it is hard to provide a "best" option. So, we select the Simulated Annealing Algorithm (SAA) to arrange the emergence order of different color schemes. Customers can also dynamically adjust certain features colors based on existing case. The result shows that the system can facilitate the communication between the designers and the customers and improve the quality and efficiency of coloring map.

75 FR 57252 - Designated Transfer Date

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-20

.... Section 1062 of the CFP Act, in relevant part, requires the Secretary to designate a single calendar date... Section 1062(a)(1) requires the Secretary to consult with the heads of the seven ``transferor agencies... 1062(c)(1), select a date between 6 and 12 months after the date of enactment of the CFP Act as the...

Regional mapping of hydrothermally altered igneous rocks along the Urumieh-Dokhtar, Chagai, and Alborz Belts of western Asia using Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) data and Interactive Data Language (IDL) logical operators: a tool for porphyry copper exploration and assessment: Chapter O in Global mineral resource assessment

USGS Publications Warehouse

Mars, John L.; Zientek, M.L.; Hammarstrom, J.M.; Johnson, K.M.; Pierce, F.W.

2014-01-01

The ASTER alteration map and corresponding geologic maps were used to select circular to elliptical patterns of argillic- and phyllic-altered volcanic and intrusive rocks as potential porphyry copper sites. One hundred and seventy eight potential porphyry copper sites were mapped along the UDVB, and 23 sites were mapped along the CVB. The potential sites were selected to assist in further exploration and assessments of undiscovered porphyry copper deposits.

High-density genetic map construction and QTLs identification for plant height in white jute (Corchorus capsularis L.) using specific locus amplified fragment (SLAF) sequencing.

PubMed

Tao, Aifen; Huang, Long; Wu, Guifen; Afshar, Reza Keshavarz; Qi, Jianmin; Xu, Jiantang; Fang, Pingping; Lin, Lihui; Zhang, Liwu; Lin, Peiqing

2017-05-08

Genetic mapping and quantitative trait locus (QTL) detection are powerful methodologies in plant improvement and breeding. White jute (Corchorus capsularis L.) is an important industrial raw material fiber crop because of its elite characteristics. However, construction of a high-density genetic map and identification of QTLs has been limited in white jute due to a lack of sufficient molecular markers. The specific locus amplified fragment sequencing (SLAF-seq) strategy combines locus-specific amplification and high-throughput sequencing to carry out de novo single nuclear polymorphism (SNP) discovery and large-scale genotyping. In this study, SLAF-seq was employed to obtain sufficient markers to construct a high-density genetic map for white jute. Moreover, with the development of abundant markers, genetic dissection of fiber yield traits such as plant height was also possible. Here, we present QTLs associated with plant height that were identified using our newly constructed genetic linkage groups. An F 8 population consisting of 100 lines was developed. In total, 69,446 high-quality SLAFs were detected of which 5,074 SLAFs were polymorphic; 913 polymorphic markers were used for the construction of a genetic map. The average coverage for each SLAF marker was 43-fold in the parents, and 9.8-fold in each F 8 individual. A linkage map was constructed that contained 913 SLAFs on 11 linkage groups (LGs) covering 1621.4 cM with an average density of 1.61 cM per locus. Among the 11 LGs, LG1 was the largest with 210 markers, a length of 406.34 cM, and an average distance of 1.93 cM between adjacent markers. LG11 was the smallest with only 25 markers, a length of 29.66 cM, and an average distance of 1.19 cM between adjacent markers. 'SNP_only' markers accounted for 85.54% and were the predominant markers on the map. QTL mapping based on the F 8 phenotypes detected 11 plant height QTLs including one major effect QTL across two cultivation locations, with each QTL accounting for 4.14-15.63% of the phenotypic variance. To our knowledge, the linkage map constructed here is the densest one available to date for white jute. This analysis also identified the first QTL in white jute. The results will provide an important platform for gene/QTL mapping, sequence assembly, genome comparisons, and marker-assisted selection breeding for white jute.

Semi-automated extraction of landslides in Taiwan based on SPOT imagery and DEMs

NASA Astrophysics Data System (ADS)

Eisank, Clemens; Hölbling, Daniel; Friedl, Barbara; Chen, Yi-Chin; Chang, Kang-Tsung

2014-05-01

The vast availability and improved quality of optical satellite data and digital elevation models (DEMs), as well as the need for complete and up-to-date landslide inventories at various spatial scales have fostered the development of semi-automated landslide recognition systems. Among the tested approaches for designing such systems, object-based image analysis (OBIA) stepped out to be a highly promising methodology. OBIA offers a flexible, spatially enabled framework for effective landslide mapping. Most object-based landslide mapping systems, however, have been tailored to specific, mainly small-scale study areas or even to single landslides only. Even though reported mapping accuracies tend to be higher than for pixel-based approaches, accuracy values are still relatively low and depend on the particular study. There is still room to improve the applicability and objectivity of object-based landslide mapping systems. The presented study aims at developing a knowledge-based landslide mapping system implemented in an OBIA environment, i.e. Trimble eCognition. In comparison to previous knowledge-based approaches, the classification of segmentation-derived multi-scale image objects relies on digital landslide signatures. These signatures hold the common operational knowledge on digital landslide mapping, as reported by 25 Taiwanese landslide experts during personal semi-structured interviews. Specifically, the signatures include information on commonly used data layers, spectral and spatial features, and feature thresholds. The signatures guide the selection and implementation of mapping rules that were finally encoded in Cognition Network Language (CNL). Multi-scale image segmentation is optimized by using the improved Estimation of Scale Parameter (ESP) tool. The approach described above is developed and tested for mapping landslides in a sub-region of the Baichi catchment in Northern Taiwan based on SPOT imagery and a high-resolution DEM. An object-based accuracy assessment is conducted by quantitatively comparing extracted landslide objects with landslide polygons that were visually interpreted by local experts. The applicability and transferability of the mapping system are evaluated by comparing initial accuracies with those achieved for the following two tests: first, usage of a SPOT image from the same year, but for a different area within the Baichi catchment; second, usage of SPOT images from multiple years for the same region. The integration of the common knowledge via digital landslide signatures is new in object-based landslide studies. In combination with strategies to optimize image segmentation this may lead to a more objective, transferable and stable knowledge-based system for the mapping of landslides from optical satellite data and DEMs.

A Map-Based Service Supporting Different Types of Geographic Knowledge for the Public

PubMed Central

Zhou, Mengjie; Wang, Rui; Tian, Jing; Ye, Ning; Mai, Shumin

2016-01-01

The internet enables the rapid and easy creation, storage, and transfer of knowledge; however, services that transfer geographic knowledge and facilitate the public understanding of geographic knowledge are still underdeveloped to date. Existing online maps (or atlases) can support limited types of geographic knowledge. In this study, we propose a framework for map-based services to represent and transfer different types of geographic knowledge to the public. A map-based service provides tools to ensure the effective transfer of geographic knowledge. We discuss the types of geographic knowledge that should be represented and transferred to the public, and we propose guidelines and a method to represent various types of knowledge through a map-based service. To facilitate the effective transfer of geographic knowledge, tools such as auxiliary background knowledge and auxiliary map-reading tools are provided through interactions with maps. An experiment conducted to illustrate our idea and to evaluate the usefulness of the map-based service is described; the results demonstrate that the map-based service is useful for transferring different types of geographic knowledge. PMID:27045314

A Map-Based Service Supporting Different Types of Geographic Knowledge for the Public.

PubMed

Zhou, Mengjie; Wang, Rui; Tian, Jing; Ye, Ning; Mai, Shumin

2016-01-01

The internet enables the rapid and easy creation, storage, and transfer of knowledge; however, services that transfer geographic knowledge and facilitate the public understanding of geographic knowledge are still underdeveloped to date. Existing online maps (or atlases) can support limited types of geographic knowledge. In this study, we propose a framework for map-based services to represent and transfer different types of geographic knowledge to the public. A map-based service provides tools to ensure the effective transfer of geographic knowledge. We discuss the types of geographic knowledge that should be represented and transferred to the public, and we propose guidelines and a method to represent various types of knowledge through a map-based service. To facilitate the effective transfer of geographic knowledge, tools such as auxiliary background knowledge and auxiliary map-reading tools are provided through interactions with maps. An experiment conducted to illustrate our idea and to evaluate the usefulness of the map-based service is described; the results demonstrate that the map-based service is useful for transferring different types of geographic knowledge.

Mapping the distribution of specific antibody interaction forces on individual red blood cells

NASA Astrophysics Data System (ADS)

Yeow, Natasha; Tabor, Rico F.; Garnier, Gil

2017-02-01

Current blood typing methods rely on the agglutination of red blood cells (RBCs) to macroscopically indicate a positive result. An indirect agglutination mechanism is required when blood typing with IgG forms of antibodies. To date, the interaction forces between anti-IgG and IgG antibodies have been poorly quantified, and blood group related antigens have never been quantified with the atomic force microscope (AFM). Instead, the total intensity resulting from fluorescent-tagged antibodies adsorbed on RBC has been measured to calculate an average antigen density on a series of RBCs. In this study we mapped specific antibody interaction forces on the RBC surface. AFM cantilever tips functionalized with anti-IgG were used to probe RBCs incubated with specific IgG antibodies. This work provides unique insight into antibody-antigen interactions in their native cell-bound location, and crucially, on a per-cell basis rather than an ensemble average set of properties. Force profiles obtained from the AFM directly provide not only the anti-IgG - IgG antibody interaction force, but also the spatial distribution and density of antigens over a single cell. This new understanding might be translated into the development of very selective and quantitative interactions that underpin the action of drugs in the treatment of frontier illnesses.

Comparison of sampling strategies for object-based classification of urban vegetation from Very High Resolution satellite images

NASA Astrophysics Data System (ADS)

Rougier, Simon; Puissant, Anne; Stumpf, André; Lachiche, Nicolas

2016-09-01

Vegetation monitoring is becoming a major issue in the urban environment due to the services they procure and necessitates an accurate and up to date mapping. Very High Resolution satellite images enable a detailed mapping of the urban tree and herbaceous vegetation. Several supervised classifications with statistical learning techniques have provided good results for the detection of urban vegetation but necessitate a large amount of training data. In this context, this study proposes to investigate the performances of different sampling strategies in order to reduce the number of examples needed. Two windows based active learning algorithms from state-of-art are compared to a classical stratified random sampling and a third combining active learning and stratified strategies is proposed. The efficiency of these strategies is evaluated on two medium size French cities, Strasbourg and Rennes, associated to different datasets. Results demonstrate that classical stratified random sampling can in some cases be just as effective as active learning methods and that it should be used more frequently to evaluate new active learning methods. Moreover, the active learning strategies proposed in this work enables to reduce the computational runtime by selecting multiple windows at each iteration without increasing the number of windows needed.

A cloud mask methodology for high resolution remote sensing data combining information from high and medium resolution optical sensors

NASA Astrophysics Data System (ADS)

Sedano, Fernando; Kempeneers, Pieter; Strobl, Peter; Kucera, Jan; Vogt, Peter; Seebach, Lucia; San-Miguel-Ayanz, Jesús

2011-09-01

This study presents a novel cloud masking approach for high resolution remote sensing images in the context of land cover mapping. As an advantage to traditional methods, the approach does not rely on thermal bands and it is applicable to images from most high resolution earth observation remote sensing sensors. The methodology couples pixel-based seed identification and object-based region growing. The seed identification stage relies on pixel value comparison between high resolution images and cloud free composites at lower spatial resolution from almost simultaneously acquired dates. The methodology was tested taking SPOT4-HRVIR, SPOT5-HRG and IRS-LISS III as high resolution images and cloud free MODIS composites as reference images. The selected scenes included a wide range of cloud types and surface features. The resulting cloud masks were evaluated through visual comparison. They were also compared with ad-hoc independently generated cloud masks and with the automatic cloud cover assessment algorithm (ACCA). In general the results showed an agreement in detected clouds higher than 95% for clouds larger than 50 ha. The approach produced consistent results identifying and mapping clouds of different type and size over various land surfaces including natural vegetation, agriculture land, built-up areas, water bodies and snow.

Mapping selected general literature of international nursing.

PubMed

Shams, Marie-Lise Antoun; Dixon, Lana S

2007-01-01

This study, part of a wider project to map the literature of nursing, identifies core journals cited in non-US nursing journals and determines the extent of their coverage by indexing services. Four general English-language journals were analyzed for format types and publication dates. Core titles were identified and nine bibliographic databases were scanned for indexing coverage. Findings show that 57.5% (13,391/23,271) of the cited references from the 4 core journals were to journal articles, 27.8% (6,471/23,271) to books, 9.5% (2,208/23,271) to government documents, 4.9% (1,131/23,271) to miscellaneous sources, and less than 1% (70/23,271) to Internet resources. Eleven journals produced one-third of the citations; the next third included 146 journals, followed by a dispersion of 1,622 titles. PubMed received the best database coverage scores, followed by CINAHL and Science Citation Index. None of the databases provided complete coverage of all 11 core titles. The four source journals contain a diverse group of cited references. The currency of citations to government documents makes these journals a good source for regulatory and legislative awareness. Nurses consult nursing and biomedical journals and must search both nursing and biomedical databases to cover the literature.

Mapping Angkor with AIRSAR/TOPSR Data

NASA Technical Reports Server (NTRS)

Freeman, A.; Hensley, S.; Moore, E.

1997-01-01

During last year's AIRSAR Pacific Rim Deployment, data were collected over Angkor in Cambodia. The temples of Angkor date the city to the 9th-13th century AD, but little is known of its prehistoric habitation.

A scalable satellite-based crop yield mapper: Integrating satellites and crop models for field-scale estimation in India

NASA Astrophysics Data System (ADS)

Jain, M.; Singh, B.; Srivastava, A.; Lobell, D. B.

2015-12-01

Food security will be challenged over the upcoming decades due to increased food demand, natural resource degradation, and climate change. In order to identify potential solutions to increase food security in the face of these changes, tools that can rapidly and accurately assess farm productivity are needed. With this aim, we have developed generalizable methods to map crop yields at the field scale using a combination of satellite imagery and crop models, and implement this approach within Google Earth Engine. We use these methods to examine wheat yield trends in Northern India, which provides over 15% of the global wheat supply and where over 80% of farmers rely on wheat as a staple food source. In addition, we identify the extent to which farmers are shifting sow date in response to heat stress, and how well shifting sow date reduces the negative impacts of heat stress on yield. To identify local-level decision-making, we map wheat sow date and yield at a high spatial resolution (30 m) using Landsat satellite imagery from 1980 to the present. This unique dataset allows us to examine sow date decisions at the field scale over 30 years, and by relating these decisions to weather experienced over the same time period, we can identify how farmers learn and adapt cropping decisions based on weather through time.

Phenotypic selection on flowering phenology and pollination efficiency traits between Primula populations with different pollinator assemblages.

PubMed

Wu, Yun; Li, Qing-Jun

2017-10-01

Floral traits have largely been attributed to phenotypic selection in plant-pollinator interactions. However, the strength of this link has rarely been ascertained with real pollinators. We conducted pollinator observations and estimated selection through female fitness on flowering phenology and floral traits between two Primula secundiflora populations. We quantified pollinator-mediated selection by subtracting estimates of selection gradients of plants receiving supplemental hand pollination from those of plants receiving open pollination. There was net directional selection for an earlier flowering start date at populations where the dominant pollinators were syrphid flies, and flowering phenology was also subjected to stabilized quadratic selection. However, a later flowering start date was significantly selected at populations where the dominant pollinators were legitimate (normal pollination through the corolla tube entrance) and illegitimate bumblebees (abnormal pollination through nectar robbing hole which located at the corolla tube), and flowering phenology was subjected to disruptive quadratic selection. Wider corolla tube entrance diameter was selected at both populations. Furthermore, the strength of net directional selection on flowering start date and corolla tube entrance diameter was stronger at the population where the dominant pollinators were syrphid flies. Pollinator-mediated selection explained most of the between-population variations in the net directional selection on flowering phenology and corolla tube entrance diameter. Our results suggested the important influence of pollinator-mediated selection on floral evolution. Variations in pollinator assemblages not only resulted in variation in the direction of selection but also the strength of selection on floral traits.

Geologic Map of the Eaton Reservoir Quadrangle, Larimer County, Colorado and Albany County, Wyoming

USGS Publications Warehouse

Workman, Jeremiah B.

2008-01-01

New geologic mapping of the Eaton Reservoir 7.5' quadrangle defines geologic relationships in the northern Front Range along the Colorado/Wyoming border approximately 35 km south of Laramie, Wyo. Previous mapping within the quadrangle was limited to regional reconnaissance mapping (Tweto, 1979; Camp, 1979; Burch, 1983) and some minor site-specific studies (Carlson and Marsh, 1986; W. Braddock, unpub. mapping, 1982). Braddock and others (1989) mapped the Diamond Peak 7.5' quadrangle to the east, Burch (1983) mapped rocks of the Rawah batholith to the south, W. Braddock (unpub. mapping, 1981) mapped the Sand Creek Pass 7.5' quadrangle to the west, and Ver Ploeg and Boyd (2000) mapped the Laramie 30' x 60' quadrangle to the north. Field work was completed during 2005 and 2006 and the mapping was compiled at a scale of 1:24,000. Minimal petrographic work and isotope dating was done in connection with the present mapping, but detailed petrographic and isotope studies were carried out on correlative map units in surrounding areas as part of a related regional study of the northern Front Range. Classification of Proterozoic rocks is primarily based upon field observation of bulk mineral composition, macroscopic textural features, and field relationships that allow for correlation with rocks studied in greater detail outside of the map area.

Inverse full state hybrid projective synchronization for chaotic maps with different dimensions

NASA Astrophysics Data System (ADS)

Ouannas, Adel; Grassi, Giuseppe

2016-09-01

A new synchronization scheme for chaotic (hyperchaotic) maps with different dimensions is presented. Specifically, given a drive system map with dimension n and a response system with dimension m, the proposed approach enables each drive system state to be synchronized with a linear response combination of the response system states. The method, based on the Lyapunov stability theory and the pole placement technique, presents some useful features: (i) it enables synchronization to be achieved for both cases of n < m and n > m; (ii) it is rigorous, being based on theorems; (iii) it can be readily applied to any chaotic (hyperchaotic) maps defined to date. Finally, the capability of the approach is illustrated by synchronization examples between the two-dimensional Hénon map (as the drive system) and the three-dimensional hyperchaotic Wang map (as the response system), and the three-dimensional Hénon-like map (as the drive system) and the two-dimensional Lorenz discrete-time system (as the response system).

Charting the Development of Portsmouth Harbour, Dockyard and Town in the Tudor Period

NASA Astrophysics Data System (ADS)

Fontana, Dominic

2013-12-01

Portsmouth was crucial to the defence of Tudor England and consequently it was mapped for military planning purposes throughout the Tudor period from 1545. The resulting sequence of maps records much of the town and harbour. The maps offer opportunities for furthering our understanding of Tudor Portsmouth and its population Additionally, images of the urban landscape provided by the "Cowdray Engraving", which depicts the loss of Henry VIII's warship Mary Rose on the 19th July 1545, may also be considered and compared with those presented in the early maps of the town. This paper considers the Portsmouth maps of 1545, 1552, 1584 and the chart of Portsmouth Harbour dating from between 1586 and 1620. These are examined in relation to one another and compared with evidence from the Cowdray Engraving.

Updates to the zoonotic niche map of Ebola virus disease in Africa

PubMed Central

Pigott, David M; Millear, Anoushka I; Earl, Lucas; Morozoff, Chloe; Han, Barbara A; Shearer, Freya M; Weiss, Daniel J; Brady, Oliver J; Kraemer, Moritz UG; Moyes, Catherine L; Bhatt, Samir; Gething, Peter W; Golding, Nick; Hay, Simon I

2016-01-01

As the outbreak of Ebola virus disease (EVD) in West Africa is now contained, attention is turning from control to future outbreak prediction and prevention. Building on a previously published zoonotic niche map (Pigott et al., 2014), this study incorporates new human and animal occurrence data and expands upon the way in which potential bat EVD reservoir species are incorporated. This update demonstrates the potential for incorporating and updating data used to generate the predicted suitability map. A new data portal for sharing such maps is discussed. This output represents the most up-to-date estimate of the extent of EVD zoonotic risk in Africa. These maps can assist in strengthening surveillance and response capacity to contain viral haemorrhagic fevers. DOI: http://dx.doi.org/10.7554/eLife.16412.001 PMID:27414263

Korean coastal water depth/sediment and land cover mapping (1:25,000) by computer analysis of LANDSAT imagery

NASA Technical Reports Server (NTRS)

Park, K. Y.; Miller, L. D.

1978-01-01

Computer analysis was applied to single date LANDSAT MSS imagery of a sample coastal area near Seoul, Korea equivalent to a 1:50,000 topographic map. Supervised image processing yielded a test classification map from this sample image containing 12 classes: 5 water depth/sediment classes, 2 shoreline/tidal classes, and 5 coastal land cover classes at a scale of 1:25,000 and with a training set accuracy of 76%. Unsupervised image classification was applied to a subportion of the site analyzed and produced classification maps comparable in results in a spatial sense. The results of this test indicated that it is feasible to produce such quantitative maps for detailed study of dynamic coastal processes given a LANDSAT image data base at sufficiently frequent time intervals.

Vegetation mapping from ERTS imagery of the Okavango Delta. [Botswana

NASA Technical Reports Server (NTRS)

Willamson, D. T.

1974-01-01

The Okavango is Botswana's major water resource. The present study has been specifically directed at mapping vegetation types within the delta and generally concerned with finding what information of value to plant and animal ecologists could be extracted from the imagery. To date it has been found that. (1) It is possible to map broad vegetation types from the imagery. (2) Imagery of the delta records the state of the system in a manner which will facilitate long-term studies of plant succession. (3) Phenological events can be detected. (4) The imagery can be used to detect and map wild fires. This will be useful in determining the role of fire in the ecology of the region. Using the imagery it is thus possible to map existing vegetation and monitor both short and long-term changes.

Rapid estimation of aquifer salinity structure from oil and gas geophysical logs

NASA Astrophysics Data System (ADS)

Shimabukuro, D.; Stephens, M.; Ducart, A.; Skinner, S. M.

2016-12-01

We describe a workflow for creating aquifer salinity maps using Archie's equation for areas that have geophysical data from oil and gas wells. We apply this method in California, where geophysical logs are available in raster format from the Division of Oil, Gas, and Geothermal Resource (DOGGR) online archive. This method should be applicable to any region where geophysical logs are readily available. Much of the work is controlled by computer code, allowing salinity estimates for new areas to be rapidly generated. For a region of interest, the DOGGR online database is scraped for wells that were logged with multi-tool suites, such as the Platform Express or Triple Combination Logging Tools. Then, well construction metadata, such as measured depth, spud date, and well orientation, is attached. The resultant local database allows a weighted criteria selection of wells that are most likely to have the shallow resistivity, deep resistivity, and density porosity measurements necessary to calculate salinity over the longest depth interval. The algorithm can be adjusted for geophysical log availability for older well fields and density of sampling. Once priority wells are identified, a student researcher team uses Neuralog software to digitize the raster geophysical logs. Total dissolved solid (TDS) concentration is then calculated in clean, wet sand intervals using the resistivity-porosity method, a modified form of Archie's equation. These sand intervals are automatically selected using a combination of spontaneous potential and the difference in shallow resistivity and deep resistivity measurements. Gamma ray logs are not used because arkosic sands common in California make it difficult to distinguish sand and shale. Computer calculation allows easy adjustment of Archie's parameters. The result is a semi-continuous TDS profile for the wells of interest. These profiles are combined and contoured using standard 3-d visualization software to yield preliminary salinity maps for the region of interest. We present results for select well fields in the Southern San Joaquin Valley, California.

Selections from 2017: Computers Help Us Map Our Home

NASA Astrophysics Data System (ADS)

Kohler, Susanna

2017-12-01

Editors note:In these last two weeks of 2017, well be looking at a few selections that we havent yet discussed on AAS Nova from among the most-downloaded paperspublished in AAS journals this year. The usual posting schedule will resume in January.Machine-Learned Identification of RR Lyrae Stars from Sparse, Multi-Band Data: The PS1 SamplePublished April2017Main takeaway:A sample of RR Lyrae variable stars was built from thePan-STARRS1 (PS1) survey by a team led byBranimir Sesar (Max Planck Institute for Astronomy, Germany). The sample of45,000 starsrepresentsthe widest (three-fourthsof the sky) and deepest (reaching 120 kpc) sample of RR Lyrae stars to date.Why its interesting:Its challengingto understand the overall shape and behaviorof our galaxy because were stuck on the inside of it. RR Lyrae stars are a useful tool for this purpose: they can be used as tracers to map out the Milky Ways halo. The authors large sample of RR Lyrae stars from PS1 combined withproper-motion measurements from Gaia and radial-velocity measurements from multi-object spectroscopic surveys could become thepremier source for studying the structure, kinematics, and the gravitational potential of our galaxys outskirts.How they were found:The black dots show the distribution of the 45,000 probable RR Lyrae stars in the authors sample. [Sesar et al. 2017]The 45,000 stars in this sample were selected not by humans, but by computer.The authors used machine-learning algorithms to examine the light curvesin the Pan-STARRS1 sample and identify the characteristic brightness variations of RR Lyrae stars lying in the galactic halo. These techniques resulted in a very pure and complete sample, and the authors suggest that this approachmay translate well to othersparse,multi-band data sets such asthat from the upcomingLarge Synoptic Survey Telescope (LSST) galactic plane sub-survey.CitationBranimir Sesar et al 2017 AJ 153 204. doi:10.3847/1538-3881/aa661b

Genome-wide linkage mapping of yield-related traits in three Chinese bread wheat populations using high-density SNP markers.

PubMed

Li, Faji; Wen, Weie; He, Zhonghu; Liu, Jindong; Jin, Hui; Cao, Shuanghe; Geng, Hongwei; Yan, Jun; Zhang, Pingzhi; Wan, Yingxiu; Xia, Xianchun

2018-06-01

We identified 21 new and stable QTL, and 11 QTL clusters for yield-related traits in three bread wheat populations using the wheat 90 K SNP assay. Identification of quantitative trait loci (QTL) for yield-related traits and closely linked molecular markers is important in order to identify gene/QTL for marker-assisted selection (MAS) in wheat breeding. The objectives of the present study were to identify QTL for yield-related traits and dissect the relationships among different traits in three wheat recombinant inbred line (RIL) populations derived from crosses Doumai × Shi 4185 (D × S), Gaocheng 8901 × Zhoumai 16 (G × Z) and Linmai 2 × Zhong 892 (L × Z). Using the available high-density linkage maps previously constructed with the wheat 90 K iSelect single nucleotide polymorphism (SNP) array, 65, 46 and 53 QTL for 12 traits were identified in the three RIL populations, respectively. Among them, 34, 23 and 27 were likely to be new QTL. Eighteen common QTL were detected across two or three populations. Eleven QTL clusters harboring multiple QTL were detected in different populations, and the interval 15.5-32.3 cM around the Rht-B1 locus on chromosome 4BS harboring 20 QTL is an important region determining grain yield (GY). Thousand-kernel weight (TKW) is significantly affected by kernel width and plant height (PH), whereas flag leaf width can be used to select lines with large kernel number per spike. Eleven candidate genes were identified, including eight cloned genes for kernel, heading date (HD) and PH-related traits as well as predicted genes for TKW, spike length and HD. The closest SNP markers of stable QTL or QTL clusters can be used for MAS in wheat breeding using kompetitive allele-specific PCR or semi-thermal asymmetric reverse PCR assays for improvement of GY.

The efficacy of the 'mind map' study technique.

PubMed

Farrand, Paul; Hussain, Fearzana; Hennessy, Enid

2002-05-01

To examine the effectiveness of using the 'mind map' study technique to improve factual recall from written information. To obtain baseline data, subjects completed a short test based on a 600-word passage of text prior to being randomly allocated to form two groups: 'self-selected study technique' and 'mind map'. After a 30-minute interval the self-selected study technique group were exposed to the same passage of text previously seen and told to apply existing study techniques. Subjects in the mind map group were trained in the mind map technique and told to apply it to the passage of text. Recall was measured after an interfering task and a week later. Measures of motivation were taken. Barts and the London School of Medicine and Dentistry, University of London. 50 second- and third-year medical students. Recall of factual material improved for both the mind map and self-selected study technique groups at immediate test compared with baseline. However this improvement was only robust after a week for those in the mind map group. At 1 week, the factual knowledge in the mind map group was greater by 10% (adjusting for baseline) (95% CI -1% to 22%). However motivation for the technique used was lower in the mind map group; if motivation could have been made equal in the groups, the improvement with mind mapping would have been 15% (95% CI 3% to 27%). Mind maps provide an effective study technique when applied to written material. However before mind maps are generally adopted as a study technique, consideration has to be given towards ways of improving motivation amongst users.

Late emergence of the vibrissa direction selectivity map in the rat barrel cortex.

PubMed

Kremer, Yves; Léger, Jean-François; Goodman, Dan; Brette, Romain; Bourdieu, Laurent

2011-07-20

In the neocortex, neuronal selectivities for multiple sensorimotor modalities are often distributed in topographical maps thought to emerge during a restricted period in early postnatal development. Rodent barrel cortex contains a somatotopic map for vibrissa identity, but the existence of maps representing other tactile features has not been clearly demonstrated. We addressed the issue of the existence in the rat cortex of an intrabarrel map for vibrissa movement direction using in vivo two-photon imaging. We discovered that the emergence of a direction map in rat barrel cortex occurs long after all known critical periods in the somatosensory system. This map is remarkably specific, taking a pinwheel-like form centered near the barrel center and aligned to the barrel cortex somatotopy. We suggest that this map may arise from intracortical mechanisms and demonstrate by simulation that the combination of spike-timing-dependent plasticity at synapses between layer 4 and layer 2/3 and realistic pad stimulation is sufficient to produce such a map. Its late emergence long after other classical maps suggests that experience-dependent map formation and refinement continue throughout adult life.

Chromosome segregation drives division site selection in Streptococcus pneumoniae.

PubMed

van Raaphorst, Renske; Kjos, Morten; Veening, Jan-Willem

2017-07-18

Accurate spatial and temporal positioning of the tubulin-like protein FtsZ is key for proper bacterial cell division. Streptococcus pneumoniae (pneumococcus) is an oval-shaped, symmetrically dividing opportunistic human pathogen lacking the canonical systems for division site control (nucleoid occlusion and the Min-system). Recently, the early division protein MapZ was identified and implicated in pneumococcal division site selection. We show that MapZ is important for proper division plane selection; thus, the question remains as to what drives pneumococcal division site selection. By mapping the cell cycle in detail, we show that directly after replication both chromosomal origin regions localize to the future cell division sites, before FtsZ. Interestingly, Z-ring formation occurs coincidently with initiation of DNA replication. Perturbing the longitudinal chromosomal organization by mutating the condensin SMC, by CRISPR/Cas9-mediated chromosome cutting, or by poisoning DNA decatenation resulted in mistiming of MapZ and FtsZ positioning and subsequent cell elongation. Together, we demonstrate an intimate relationship between DNA replication, chromosome segregation, and division site selection in the pneumococcus, providing a simple way to ensure equally sized daughter cells.

Identification and Evaluation of Fluvial-Dominated Deltaic (Class 1 Oil) Reservoirs in Oklahoma: Yearly technical progress report for January 1-December 31, 1996

DOE Office of Scientific and Technical Information (OSTI.GOV)

Banken, M.K.; Andrews, R.

The Oklahoma Geological Survey (OGS), the Geo Information Systems department, and the School of Petroleum and Geological Engineering at the University of Oklahoma are engaged in a five-year program to identify and address Oklahoma`s oil recovery opportunities in fluvial-dominated deltaic (FDD) reservoirs. This program includes a systematic and comprehensive collection and evaluation of information on all FDD oil reservoirs in Oklahoma and the recovery technologies that have been (or could be) applied to those reservoirs with commercial success. During 1996, three highly successful FDD workshops involving 6 producing formations (4 plays) were completed: (1) Layton and Osage-Layton April 17 (2)more » Prue and Skinner June 19 and 26 (3) Cleveland October 17 (4) Peru October 17 (combined with Cleveland play). Each play was presented individually using the adopted protocol of stratigraphic interpretations, a regional overview, and two or more detailed field studies. The project goal was to have one field study from each play selected for waterflood simulation in order to demonstrate enhanced recovery technologies that can be used to recovery secondary oil. In this effort, software utilized for reservoir simulation included Eclipse and Boast 111. In some cases, because of poor production records and inadequate geologic data, field studies completed in some plays were not suitable for modeling. All of the workshops included regional sandstone trend analysis, updated field boundary identification, a detailed bibliography and author reference map, and detailed field studies. Discussion of general FDD depositional concepts was also given. In addition to the main workshop agenda, the workshops provided computer mapping demonstrations and rock cores with lithologic and facies interpretations. In addition to the workshops, other elements of FDD program were improved during 1996. Most significant was the refinement of NRIS MAPS - a user-friendly computer program designed to access NRIS data and interface with mapping software such as Arc View in order to produce various types of information maps. Most commonly used are well base maps for field studies, lease production maps, and regional maps showing well production codes, formation show codes, well spud dates, and well status codes. These regional maps are valuable in identifying areas of by-passed oil production, field trends, and time periods of development for the various FDD plays in Oklahoma. Besides maps, NRIS MAPS provides data in table format which can be used to generate production decline curves and estimates of cumulative hydrocarbon production for leases and fields. Additionally, many computer-related services were provided by support staff concerning technical training, private consultation, computer mapping, and data acquisition.« less

Development of Maximum Considered Earthquake Ground Motion Maps

USGS Publications Warehouse

Leyendecker, E.V.; Hunt, R.J.; Frankel, A.D.; Rukstales, K.S.

2000-01-01

The 1997 NEHRP Recommended Provisions for Seismic Regulations for New Buildings use a design procedure that is based on spectral response acceleration rather than the traditional peak ground acceleration, peak ground velocity, or zone factors. The spectral response accelerations are obtained from maps prepared following the recommendations of the Building Seismic Safety Council's (BSSC) Seismic Design Procedures Group (SDPG). The SDPG-recommended maps, the Maximum Considered Earthquake (MCE) Ground Motion Maps, are based on the U.S. Geological Survey (USGS) probabilistic hazard maps with additional modifications incorporating deterministic ground motions in selected areas and the application of engineering judgement. The MCE ground motion maps included with the 1997 NEHRP Provisions also serve as the basis for the ground motion maps used in the seismic design portions of the 2000 International Building Code and the 2000 International Residential Code. Additionally the design maps prepared for the 1997 NEHRP Provisions, combined with selected USGS probabilistic maps, are used with the 1997 NEHRP Guidelines for the Seismic Rehabilitation of Buildings.

Quantitative trait nucleotide analysis using Bayesian model selection.

PubMed

Blangero, John; Goring, Harald H H; Kent, Jack W; Williams, Jeff T; Peterson, Charles P; Almasy, Laura; Dyer, Thomas D

2005-10-01

Although much attention has been given to statistical genetic methods for the initial localization and fine mapping of quantitative trait loci (QTLs), little methodological work has been done to date on the problem of statistically identifying the most likely functional polymorphisms using sequence data. In this paper we provide a general statistical genetic framework, called Bayesian quantitative trait nucleotide (BQTN) analysis, for assessing the likely functional status of genetic variants. The approach requires the initial enumeration of all genetic variants in a set of resequenced individuals. These polymorphisms are then typed in a large number of individuals (potentially in families), and marker variation is related to quantitative phenotypic variation using Bayesian model selection and averaging. For each sequence variant a posterior probability of effect is obtained and can be used to prioritize additional molecular functional experiments. An example of this quantitative nucleotide analysis is provided using the GAW12 simulated data. The results show that the BQTN method may be useful for choosing the most likely functional variants within a gene (or set of genes). We also include instructions on how to use our computer program, SOLAR, for association analysis and BQTN analysis.

Toxicophore exploration as a screening technology for drug design and discovery: techniques, scope and limitations.

PubMed

Singh, Pankaj Kumar; Negi, Arvind; Gupta, Pawan Kumar; Chauhan, Monika; Kumar, Raj

2016-08-01

Toxicity is a common drawback of newly designed chemotherapeutic agents. With the exception of pharmacophore-induced toxicity (lack of selectivity at higher concentrations of a drug), the toxicity due to chemotherapeutic agents is based on the toxicophore moiety present in the drug. To date, methodologies implemented to determine toxicophores may be broadly classified into biological, bioanalytical and computational approaches. The biological approach involves analysis of bioactivated metabolites, whereas the computational approach involves a QSAR-based method, mapping techniques, an inverse docking technique and a few toxicophore identification/estimation tools. Being one of the major steps in drug discovery process, toxicophore identification has proven to be an essential screening step in drug design and development. The paper is first of its kind, attempting to cover and compare different methodologies employed in predicting and determining toxicophores with an emphasis on their scope and limitations. Such information may prove vital in the appropriate selection of methodology and can be used as screening technology by researchers to discover the toxicophoric potentials of their designed and synthesized moieties. Additionally, it can be utilized in the manipulation of molecules containing toxicophores in such a manner that their toxicities might be eliminated or removed.

Mapping surface energy balance components by combining Landsat Thematic Mapper and ground-based meteorological data

NASA Technical Reports Server (NTRS)

Moran, M. Susan; Jackson, Ray D.; Raymond, Lee H.; Gay, Lloyd W.; Slater, Philip N.

1989-01-01

Surface energy balance components were evaluated by combining satellite-based spectral data with on-site measurements of solar irradiance, air temperature, wind speed, and vapor pressure. Maps of latent heat flux density and net radiant flux density were produced using Landsat TM data for three dates. The TM-based estimates differed from Bowen-ratio and aircraft-based estimates by less than 12 percent over mature fields of cotton, wheat, and alfalfa.

Ukrainians in America: Contributions to America, Relationship to Homeland, Integration into American Life, Retention of Ethnicity in America. Ethnic Heritage in America: Curriculum Materials in Elementary School Social Studies on Greeks, Jews, Lithuanians, and Ukrainians.

ERIC Educational Resources Information Center

Chicago Consortium for Inter-Ethnic Curriculum Development, IL.

This ethnic heritage unit is about Ukrainians in the United States. The first section presents basic facts, such as a map of Ukraine, map of Eastern Europe, facts about Ukraine, principal dates in Ukrainian history, ten outstanding figures in modern Ukrainian history, milestones of Ukrainian communities in the United States, bibliography about…

EMMMA: A web-based system for environmental mercury mapping, modeling, and analysis

USGS Publications Warehouse

Hearn,, Paul P.; Wente, Stephen P.; Donato, David I.; Aguinaldo, John J.

2006-01-01

tissue, atmospheric emissions and deposition, stream sediments, soils, and coal) and mercuryrelated data (mine locations); 2) Interactively view and access predictions of the National Descriptive Model of Mercury in Fish (NDMMF) at 4,976 sites and 6,829 sampling events (events are unique combinations of site and sampling date) across the United States; and 3) Use interactive mapping and graphing capabilities to visualize spatial and temporal trends and study relationships between mercury and other variables.

Geoscientific Site Evaluation Approach for Canada's Deep Geological Repository for Used Nuclear Fuel

NASA Astrophysics Data System (ADS)

Sanchez-Rico Castejon, M.; Hirschorn, S.; Ben Belfadhel, M.

2015-12-01

The Nuclear Waste Management Organization (NWMO) is responsible for implementing Adaptive Phased Management, the approach selected by the Government of Canada for long-term management of used nuclear fuel generated by Canadian nuclear reactors. The ultimate objective of APM is the centralized containment and isolation of Canada's used nuclear fuel in a Deep Geological Repository in a suitable crystalline or sedimentary rock formation. In May 2010, the NWMO published and initiated a nine-step site selection process to find an informed and willing community to host a deep geological repository for Canada's used nuclear fuel. The site selection process is designed to address a broad range of technical and social, economic and cultural factors. The site evaluation process includes three main technical evaluation steps: Initial Screenings; Preliminary Assessments; and Detailed Site Characterizations, to assess the suitability of candidate areas in a stepwise manner over a period of many years. By the end of 2012, twenty two communities had expressed interest in learning more about the project. As of July 2015, nine communities remain in the site selection process. To date (July 2015), NWMO has completed Initial Screenings for the 22 communities that expressed interest, and has completed the first phase of Preliminary Assessments (desktop) for 20 of the communities. Phase 2 of the Preliminary Assessments has been initiated in a number of communities, with field activities such as high-resolution airborne geophysical surveys and geological mapping. This paper describes the approach, methods and criteria being used to assess the geoscientific suitability of communities currently involved in the site selection process.

Deciphering the evolution of the last Eurasian ice sheets

NASA Astrophysics Data System (ADS)

Hughes, Anna; Gyllencreutz, Richard; Mangerud, Jan; Svendsen, John Inge

2016-04-01

Glacial geologists need ice sheet-scale chronological reconstructions of former ice extent to set individual records in a wider context and compare interpretations of ice sheet response to records of past environmental changes. Ice sheet modellers require empirical reconstructions on size and volume of past ice sheets that are fully documented, specified in time and include uncertainty estimates for model validation or constraints. Motivated by these demands, in 2005 we started a project (Database of the Eurasian Deglaciation, DATED) to compile and archive all published dates relevant to constraining the build-up and retreat of the last Eurasian ice sheets, including the British-Irish, Scandinavian and Svalbard-Barents-Kara Seas ice sheets (BIIS, SIS and SBKIS respectively). Over 5000 dates were assessed for reliability and used together with published ice-sheet margin positions to reconstruct time-slice maps of the ice sheets' extent, with uncertainty bounds, every 1000 years between 25-10 kyr ago and at four additional periods back to 40 kyr ago. Ten years after the idea for a database was conceived, the first version of results (DATED-1) has now been released (Hughes et al. 2016). We observe that: i) both the BIIS and SBKIS achieve maximum extent, and commence retreat earlier than the larger SIS; ii) the eastern terrestrial margin of the SIS reached its maximum extent up to 7000 years later than the westernmost marine margin; iii) the combined maximum ice volume (~24 m sea-level equivalent) was reached c. 21 ka; iv) large uncertainties exist; predominantly across marine sectors (e.g. the timing of coalescence and separation of the SIS and BKIS) but also in well-studied areas due to conflicting yet equally robust data. In just three years since the DATED-1 census (1 January 2013), the volume of new information (from both dates and mapped glacial geomorphology) has grown significantly (~1000 new dates). Here, we present the DATED-1 results in the context of the climatic changes of the last glacial, discuss the implications of emerging post-census data, and describe plans for the next version of the database, DATED-2. Hughes, A. L. C., Gyllencreutz, R., Lohne, Ø. S., Mangerud, J., Svendsen, J. I. 2016: The last Eurasian ice sheets - a chronological database and time-slice reconstruction, DATED-1. Boreas, 45, 1-45. 10.1111/bor.12142

78 FR 23818 - Urbanized Area Formula Program: Proposed Circular

Federal Register 2010, 2011, 2012, 2013, 2014

2013-04-22

... that MAP-21 has had on the State Safety Oversight (SSO) Program and the requirements of 49 CFR 659. Section 5330, which authorizes the SSO Program, will be repealed three years from the effective date of...

24. Photocopy of photograph (from Division of Beaches and Parks, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

24. Photocopy of photograph (from Division of Beaches and Parks, State of California, Department of Natural Resources) Photographer unknown, Date unknown MAP OF SUTTER'S FORT - Sutter's Fort, L & Twenty-Seventh Streets, Sacramento, Sacramento County, CA

Safe Sex Tips for Seniors

MedlinePlus

... day and age — with more open attitudes toward sexuality, better health among older adults, internet dating, and ... problems. Last Updated October 2015 © 2018 Health in Aging. All rights reserved. Feedback • Site Map • Privacy Policy • ...

Mapping surface energy balance components by combining landsat thematic mapper and ground-based meteorological data

USGS Publications Warehouse

Moran, M.S.; Jackson, R. D.; Raymond, L.H.; Gay, L.W.; Slater, P.N.

1989-01-01

Surface energy balance components were evaluated by combining satellite-based spectral data with on-site measurements of solar irradiance, air temperature, wind speed, and vapor pressure. Maps of latent heat flux density (??E) and net radiant flux density (Rn) were produced using Landsat Thematic Mapper (TM) data for three dates: 23 July 1985, 5 April 1986, and 24 June 1986. On each date, a Bowen-ratio apparatus, located in a vegetated field, was used to measure ??E and Rn at a point within the field. Estimates of ??E and Rn were also obtained using radiometers aboard an aircraft flown at 150 m above ground level. The TM-based estimates differed from the Bowen-ratio and aircraft-based estimates by less than 12 % over mature fields of cotton, wheat, and alfalfa, where ??E and Rn ranged from 400 to 700 Wm-2. ?? 1989.

Mapping deforestation and urban expansion in Freetown, Sierra Leone, from pre- to post-war economic recovery.

PubMed

Mansaray, Lamin R; Huang, Jingfeng; Kamara, Alimamy A

2016-08-01

Freetown, the capital of Sierra Leone has experienced vast land-cover changes over the past three decades. In Sierra Leone, however, availability of updated land-cover data is still a problem even for environmental managers. This study was therefore, conducted to provide up-to-date land-cover data for Freetown. Multi-temporal Landsat data at 1986, 2001, and 2015 were obtained, and a maximum likelihood supervised classification was employed. Eight land-cover classes or categories were recognized as follows: water, wetland, built-up, dense forest, sparse forest, grassland, barren, and mangrove. Land-cover changes were mapped via post-classification change detection. The persistence, gain, and loss of each land-cover class, and selected land conversions were also quantified. An overall classification accuracy of 87.3 % and a Kappa statistic of 0.85 were obtained for the 2015 map. From 1986 to 2015, water, built-up, grassland, and barren had net gains, whereas forests, wetlands, and mangrove had net loses. Conversion analyses among forests, grassland, and built-up show that built-up had targeted grassland and avoided forests. This study also revealed that, the overall land-cover change at 2001-2015 was higher (28.5 %) than that recorded at 1986-2001 (20.9 %). This is attributable to the population increase in Freetown and the high economic growth and infrastructural development recorded countrywide after the civil war. In view of the rapid land-cover change and its associated environmental impacts, this study recommends the enactment of policies that would strike a balance between urbanization and environmental sustainability in Freetown.

Execution models for mapping programs onto distributed memory parallel computers

NASA Technical Reports Server (NTRS)

Sussman, Alan

1992-01-01

The problem of exploiting the parallelism available in a program to efficiently employ the resources of the target machine is addressed. The problem is discussed in the context of building a mapping compiler for a distributed memory parallel machine. The paper describes using execution models to drive the process of mapping a program in the most efficient way onto a particular machine. Through analysis of the execution models for several mapping techniques for one class of programs, we show that the selection of the best technique for a particular program instance can make a significant difference in performance. On the other hand, the results of benchmarks from an implementation of a mapping compiler show that our execution models are accurate enough to select the best mapping technique for a given program.

Earthquakes in and near the northeastern United States, 1638-1998

USGS Publications Warehouse

Wheeler, R.L.; Trevor, N.K.; Tarr, A.C.; Crone, A.J.

2000-01-01

The data are those used to make a large-format, colored map of earthquakes in the northeastern United States and adjacent parts of Canada and the Atlantic Ocean (Wheeler, 2000; Wheeler and others, 2001; references in Data_Quality_Information, Lineage). The map shows the locations of 1,069 known earthquakes of magnitude 3.0 or larger, and is designed for a non-technical audience. Colored circles represent earthquake locations, colored and sized by magnitude. Short descriptions, colonial-era woodcuts, newspaper headlines, and photographs summarize the dates, times of day, damage, and other effects of notable earthquakes. The base map shows color-coded elevation, shaded to emphasize relief.

Dark Energy Survey Year 1 Results: Curved-Sky Weak Lensing Mass Map

DOE PAGES

Chang, C.; Sheldon, E.; Pujol, A.; ...

2018-01-04

We construct the largest curved-sky galaxy weak lensing mass map to date from the DES firstyear (DES Y1) data. The map, about 10 times larger than previous work, is constructed over a contiguous ≈1;500 deg 2, covering a comoving volume of ≈10 Gpc 3. The effects of masking, sampling, and noise are tested using simulations. We generate weak lensing maps from two DES Y1 shear catalogs, METACALIBRATION and IM3SHAPE, with sources at redshift 0:2 < z < 1:3; and in each of four bins in this range. In the highest signal-to-noise map, the ratio between the mean signal-to-noise in themore » E-mode and the B-mode map is ~1.5 (~2) when smoothed with a Gaussian filter of sG =30 (80) arcminutes. The second and third moments of the convergence k in the maps are in agreement with simulations. We also find no significant correlation of k with maps of potential systematic contaminants. Finally, we demonstrate two applications of the mass maps: (1) cross-correlation with different foreground tracers of mass and (2) exploration of the largest peaks and voids in the maps.« less

Dark Energy Survey Year 1 Results: Curved-Sky Weak Lensing Mass Map

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chang, C.; Sheldon, E.; Pujol, A.

We construct the largest curved-sky galaxy weak lensing mass map to date from the DES firstyear (DES Y1) data. The map, about 10 times larger than previous work, is constructed over a contiguous ≈1;500 deg 2, covering a comoving volume of ≈10 Gpc 3. The effects of masking, sampling, and noise are tested using simulations. We generate weak lensing maps from two DES Y1 shear catalogs, METACALIBRATION and IM3SHAPE, with sources at redshift 0:2 < z < 1:3; and in each of four bins in this range. In the highest signal-to-noise map, the ratio between the mean signal-to-noise in themore » E-mode and the B-mode map is ~1.5 (~2) when smoothed with a Gaussian filter of sG =30 (80) arcminutes. The second and third moments of the convergence k in the maps are in agreement with simulations. We also find no significant correlation of k with maps of potential systematic contaminants. Finally, we demonstrate two applications of the mass maps: (1) cross-correlation with different foreground tracers of mass and (2) exploration of the largest peaks and voids in the maps.« less

Sinkhole hazard assessment in Lesina Marina area (Apulia, Italy)

NASA Astrophysics Data System (ADS)

Canora, F.; Caporale, F.; D'Angella, A.; Fidelibus, D.; Gutierrez, F.; Pellicani, R.; Spilotro, G.

2012-04-01

In "Lesina Marina" area, located in the north-western part of the Apulia region (Italy), near the Adriatic coast, sinkhole phenomena are particularly widespread and constitute a risk for the built-up area. These phenomena are due to the structure of the evaporitic rocks located in the study area and to the groundwater regime, influenced by the presence of a channel that connects the sea to the lagoon. The complex sea-channel-lagoon system produces an inland flow towards the channel modulated by the tide with a variable width according to the rules of the coastal aquifers. Further studies have been carried out in order to clarify the context and the causes of this instability phenomenon. A procedure for the sinkhole susceptibility and hazard assessment has been performed, in order to evaluate the spatial distribution of the most unstable areas and the potential spatio-temporal evolution of the phenomenon. The sinkhole susceptibility model has been created in GIS by assessing the spatial relationship between the sinkhole inventory map and a series of thematic maps relative to instability factors. The thematic layers selected for the study are nine and cover geometrical features of the surface, of the gypsum rockhead and of the incoherent soil cover, groundwater and daily and seasonal groundwater level variations. Daily groundwater variation in a semiconfined coastal aquifer can be related to the permeability and to the void structures of the evaporitic mass. In the years subsequent to 1980, when the first reports of the presence of sinkholes are dated, the evolution of these instabilities in terms of their number and of their increase of extension has been monitored with repeated surveys. These data were used for susceptibility model validation and to define the hazard model. The selected layers revealed to be very useful in describing and mapping the hazard coming from suffusion sinkholes in the study area. The sinkhole hazard assessment is carried out, according to previous methodologies, by spatio-temporal probability (frequency) of new sinkholes in each susceptibility class. The sinkhole hazard mapping in this area will provide a useful tool for planning, development, management and recovery of areas affected by the instability and constitutes a useful basis to plan sustainable risk mitigation measures.

Preliminary atlas of active shallow tectonic deformation in the Puget Lowland, Washington

USGS Publications Warehouse

Barnett, Elizabeth A.; Haugerud, Ralph A.; Sherrod, Brian L.; Weaver, Craig S.; Pratt, Thomas L.; Blakely, Richard J.

2010-01-01

This atlas presents an up-to-date map compilation of the geological and geophysical observations that underpin interpretations of active, surface-deforming faults in the Puget Lowland, Washington. Shallow lowland faults are mapped where observations of deformation from paleoseismic, seismic-reflection, and potential-field investigations converge. Together, results from these studies strengthen the identification and characterization of regional faults and show that as many as a dozen shallow faults have been active during the Holocene. The suite of maps presented in our atlas identifies sites that have evidence of deformation attributed to these shallow faults. For example, the paleoseismic-investigations map shows where coseismic surface rupture and deformation produced geomorphic scarps and deformed shorelines. Other maps compile results of seismic-reflection and potential-field studies that demonstrate evidence of deformation along suspected fault structures in the subsurface. Summary maps show the fault traces derived from, and draped over, the datasets presented in the preceding maps. Overall, the atlas provides map users with a visual overview of the observations and interpretations that support the existence of active, shallow faults beneath the densely populated Puget Lowland.

Expansive Tidal Marshes on the North American Eastern Seaboard: Relics of Colonial Deforestation?

NASA Astrophysics Data System (ADS)

Murray, A.; Kirwan, M.

2013-12-01

Experiments using a numerical model of tidal marsh ecomorphodynamic evolution suggest that changes in sediment supply (suspended sediment concentrations) reaching tidal marshes can play a role as strong as sea-level-rise rate in determining the extent and elevation of coastal wetlands. Testing a model-generated hypothesis, sediment coring and radiocarbon dating in the Plum Island Estuary marshes, Massachusetts, USA, suggested that marshes prograded rapidly and substantially following colonial deforestation (Kirwan et al., Geology, 2011). This controversial claim has been questioned, in part because historical maps from 1780 and 1830 show that the marsh had already attained most of its modern extent by that time--which is earlier than some of the of the radiocarbon mid-point dates (Priestas et al., Geology Forum, Dec. 2012). However, given the uncertainties in the radiocarbon dates, and in identifying the earliest marsh-derived layers in sediment cores, the maps and the dating are broadly consistent (Kirwan and Murray, Geology Forum, Dec. 2012). In addition, previous studies have shown that considerable land-use change had already occurred in this small coastal watershed by the late 17th Century, with local laws against tree cutting in place by 1660, and evidence for regional deforestation by 1700. Our field evidence, combined with the historical maps, indicates that this early colonial development lead to an expansion of marshes by approximately 50 percent within the studied area. Given the widespread and pervasive nature of subsequent land-use changes on the Eastern Seaboard from colonial through civil war periods, many of the currently expansive marshes on the East Coast may be relict. Numerical modeling suggests that when sediment concentrations fall below the values required to form a marsh, the marsh will be metastable, with vegetation feedbacks able to maintain the relict morphology and ecology, but susceptible to irreversible loss in response to disturbances. Thus, the field investigations in one location may have wide reaching implications for explaining and mitigating observed marsh degradation.

Geodesy and Mapping (Selected Articles),

DTIC Science & Technology

1979-08-16

August 1979 MICROFICHE NR. C-0/O GEODESY AND MAPPING (SELECTED ARTICLES) English pages: 53 Source: Geodezja i Kartograflia, Vol. 27, Nr. 2, 1978, pp. 83...Hausbrandt S., Wyrdwnanie sieci trygonemetryernych z odrzuceniem zalolenia bezbIfdneil pwo- ktdw dowiqzania, Geodezja i Kartografia. T III, z. 1, 1954. [2

Not one extrastriate body area: Using anatomical landmarks, hMT+, and visual field maps to parcellate limb-selective activations in human lateral occipitotemporal cortex

PubMed Central

Weiner, Kevin S.; Grill-Spector, Kalanit

2011-01-01

The prevailing view of human lateral occipitotemporal cortex (LOTC) organization suggests a single area selective for images of the human body (extrastriate body area, EBA) that highly overlaps with the human motion-selective complex (hMT+). Using functional magnetic resonance imaging with higher resolution (1.5mm voxels) than past studies (3–4mm voxels), we examined the fine-scale spatial organization of these activations relative to each other, as well as to visual field maps in LOTC. Rather than one contiguous EBA highly overlapping hMT+, results indicate three limb-selective activations organized in a crescent surrounding hMT+: (1) an activation posterior to hMT+ on the lateral occipital sulcus/middle occipital gyrus (LOS/MOG) overlapping the lower vertical meridian shared between visual field maps LO-2 and TO-1, (2) an activation anterior to hMT+ on the middle temporal gyrus (MTG) consistently overlapping the lower vertical meridian of TO-2 and extending outside presently defined visual field maps, and (3) an activation inferior to hMT+ on the inferotemporal gyrus (ITG) overlapping the parafoveal representation of the TO cluster. This crescent organization of limb-selective activations surrounding hMT+ is reproducible over a span of three years and is consistent across different image types used for localization. Further, these regions exhibit differential position properties: preference for contralateral image presentation decreases and preference for foveal presentation increases from the limb-selective LOS to the MTG. Finally, the relationship between limb-selective activations and visual field maps extends to the dorsal stream where a posterior IPS activation overlaps V7. Overall, our measurements demonstrate a series of LOTC limb-selective activations that 1) have separate anatomical and functional boundaries, 2) overlap distinct visual field maps, and 3) illustrate differential position properties. These findings indicate that category selectivity alone is an insufficient organization principle for defining brain areas. Instead, multiple properties are necessary in order to parcellate and understand the functional organization of high-level visual cortex. PMID:21439386

An Ocean Observing System for Large-Scale Monitoring and Mapping of Noise Throughout the Stellwagen Bank National Marine Sanctuary

DTIC Science & Technology

2011-09-30

sounds. The numbers for fin whales and humpback whale song are still being analyzed. Figure 3 shows the difference in communication masking for one...Three call types were chosen to characterize humpback whale song and social sounds; only one is reported here. Week # Date Start Date End Species...Risch, D., Van Parijs, S. M. (in review).Seasonal variation in the presence of humpback whale song on a north Atlantic foraging ground. Aquatic Biology 11

Optimizing Coverage of Three-Dimensional Wireless Sensor Networks by Means of Photon Mapping

DTIC Science & Technology

2013-12-01

information if it does not display a currently valid OMB control number. 1. REPORT DATE DEC 2013 2. REPORT TYPE 3. DATES COVERED 00-00-2013 to 00-00...information about the monitored space is sensed?” Solving this formulation of the AGP relies upon the creation of a model describing how a set of...simulated photons will propagate in a 3D virtual environment. Furthermore, the photon model requires an efficient data structure with small memory

Clair de lune sur le port de Boulogne: enquête sur un tableau de Manet, traduction d'un article de Donald W. Olson

NASA Astrophysics Data System (ADS)

Borg, Janet

2016-10-01

The 19th-century artist Edouard Manet created a spectacular nocturnal painting showing a full Moon over the harbor of Boulogne. Art historians have dated this work to either 1868 or 1869. Calculations of lunar phases, 19th-century maps and photographs of Boulogne harbor, the correspondence of the artist, and other clues allow us to determine a date and precise time when Manet observed this moonlit scene.

The Coast Artillery Journal. Volume 68, Number 6, June 1928

DTIC Science & Technology

1928-06-01

text book on the Turkish Army, and two guide books. The maps available were not up to date and contained few details. Writing in his diary under date...The moon shone faintly through the clouds and at 1 :00 A. M. the ships stopped, waiting for the moon to set. While lying here, all six men-of-war...against the firing table value of 63 yards. The prohable error of the prohahle error was then determined in the same manner that we ordinarily compute the

Saturation of an Intra-Gene Pool Linkage Map: Towards a Unified Consensus Linkage Map for Fine Mapping and Synteny Analysis in Common Bean

PubMed Central

Galeano, Carlos H.; Fernandez, Andrea C.; Franco-Herrera, Natalia; Cichy, Karen A.; McClean, Phillip E.; Vanderleyden, Jos; Blair, Matthew W.

2011-01-01

Map-based cloning and fine mapping to find genes of interest and marker assisted selection (MAS) requires good genetic maps with reproducible markers. In this study, we saturated the linkage map of the intra-gene pool population of common bean DOR364×BAT477 (DB) by evaluating 2,706 molecular markers including SSR, SNP, and gene-based markers. On average the polymorphism rate was 7.7% due to the narrow genetic base between the parents. The DB linkage map consisted of 291 markers with a total map length of 1,788 cM. A consensus map was built using the core mapping populations derived from inter-gene pool crosses: DOR364×G19833 (DG) and BAT93×JALO EEP558 (BJ). The consensus map consisted of a total of 1,010 markers mapped, with a total map length of 2,041 cM across 11 linkage groups. On average, each linkage group on the consensus map contained 91 markers of which 83% were single copy markers. Finally, a synteny analysis was carried out using our highly saturated consensus maps compared with the soybean pseudo-chromosome assembly. A total of 772 marker sequences were compared with the soybean genome. A total of 44 syntenic blocks were identified. The linkage group Pv6 presented the most diverse pattern of synteny with seven syntenic blocks, and Pv9 showed the most consistent relations with soybean with just two syntenic blocks. Additionally, a co-linear analysis using common bean transcript map information against soybean coding sequences (CDS) revealed the relationship with 787 soybean genes. The common bean consensus map has allowed us to map a larger number of markers, to obtain a more complete coverage of the common bean genome. Our results, combined with synteny relationships provide tools to increase marker density in selected genomic regions to identify closely linked polymorphic markers for indirect selection, fine mapping or for positional cloning. PMID:22174773

14 CFR 1214.1103 - Application cutoff date.

Code of Federal Regulations, 2011 CFR

2011-01-01

... 14 Aeronautics and Space 5 2011-01-01 2010-01-01 true Application cutoff date. 1214.1103 Section 1214.1103 Aeronautics and Space NATIONAL AERONAUTICS AND SPACE ADMINISTRATION SPACE FLIGHT NASA Astronaut Candidate Recruitment and Selection Program § 1214.1103 Application cutoff date. (a) The JSC...

14 CFR 1214.1103 - Application cutoff date.

Code of Federal Regulations, 2010 CFR

2010-01-01

... 14 Aeronautics and Space 5 2010-01-01 2010-01-01 false Application cutoff date. 1214.1103 Section 1214.1103 Aeronautics and Space NATIONAL AERONAUTICS AND SPACE ADMINISTRATION SPACE FLIGHT NASA Astronaut Candidate Recruitment and Selection Program § 1214.1103 Application cutoff date. (a) The JSC...

Commentary: A cautionary tale regarding use of the National Land Cover Dataset 1992

USGS Publications Warehouse

Thogmartin, Wayne E.; Gallant, Alisa L.; Knutson, Melinda G.; Fox, Timothy J.; Suarez, Manuel J.

2004-01-01

Digital land-cover data are among the most popular data sources used in ecological research and natural resource management. However, processes for accurate land-cover classification over large regions are still evolving. We identified inconsistencies in the National Land Cover Dataset 1992, the most current and available representation of land cover for the conterminous United States. We also report means to address these inconsistencies in a bird-habitat model. We used a Geographic Information System (GIS) to position a regular grid (or lattice) over the upper midwestern United States and summarized the proportion of individual land covers in each cell within the lattice. These proportions were then mapped back onto the lattice, and the resultant lattice was compared to satellite paths, state borders, and regional map classification units. We observed mapping inconsistencies at the borders between mapping regions, states, and Thematic Mapper (TM) mapping paths in the upper midwestern United States, particularly related to grass I and-herbaceous, emergent-herbaceous wetland, and small-grain land covers. We attributed these discrepancies to differences in image dates between mapping regions, suboptimal image dates for distinguishing certain land-cover types, lack of suitable ancillary data for improving discrimination for rare land covers, and possibly differences among image interpreters. To overcome these inconsistencies for the purpose of modeling regional populations of birds, we combined grassland-herbaceous and pasture-hay land-cover classes and excluded the use of emergent-herbaceous and small-grain land covers. We recommend that users of digital land-cover data conduct similar assessments for other regions before using these data for habitat evaluation. Further, caution is advised in using these data in the analysis of regional land-cover change because it is not likely that future digital land-cover maps will repeat the same problems, thus resulting in biased estimates of change.

The three-dimensional structure of MAP kinase p38[beta]: different features of the ATP-binding site in p38[beta] compared with p38[alpha

DOE Office of Scientific and Technical Information (OSTI.GOV)

Patel, Sangita B.; Cameron, Patricia M.; O'Keefe, Stephen J.

2010-10-18

The p38 mitogen-activated protein kinases are activated in response to environmental stress and cytokines and play a significant role in transcriptional regulation and inflammatory responses. Of the four p38 isoforms known to date, two (p38{alpha} and p38{beta}) have been identified as targets for cytokine-suppressive anti-inflammatory drugs. Recently, it was reported that specific inhibition of the p38{alpha} isoform is necessary and sufficient for anti-inflammatory efficacy in vivo, while further inhibition of p38{beta} may not provide any additional benefit. In order to aid the development of p38{alpha}-selective compounds, the three-dimensional structure of p38{beta} was determined. To do so, the C162S and C119S,C162Smore » mutants of human MAP kinase p38{beta} were cloned, expressed in Escherichia coli and purified. Initial screening hits in crystallization trials in the presence of an inhibitor led upon optimization to crystals that diffracted to 2.05 {angstrom} resolution and allowed structure determination (PDB codes 3gc8 and 3gc9 for the single and double mutant, respectively). The structure of the p38{alpha} C162S mutant in complex with the same inhibitor is also reported (PDB code 3gc7). A comparison between the structures of the two kinases showed that they are highly similar overall but that there are differences in the relative orientation of the N- and C-terminal domains that causes a reduction in the size of the ATP-binding pocket in p38{beta}. This difference in size between the two pockets could be exploited in order to achieve selectivity.« less

Change in Ice Thaw Dates for Selected U.S. Lakes, 1905-2015

EPA Pesticide Factsheets

This figure shows the change in the ice-off date, or date of ice thawing and breakup, for 14 U.S. lakes during the period from 1905 to 2015. All of the lakes have red circles with negative numbers, which represent earlier thaw dates. Larger circles indicate larger changes. For more information: www.epa.gov/climatechange/science/indicators

Using variable importance measures to identify a small set of single nucleotide polymorphisms capable of predicting heading date in perennial ryegrass

USDA-ARS?s Scientific Manuscript database

Prior knowledge on heading date enables the selection of parents for synthetic cultivars that are well-matched with respect to heading date, which is necessary to ensure plants put together will successfully cross with each other. Heading date of individual plants can be determined directly, which h...

Topsoil organic carbon content of Europe, a new map based on a generalised additive model

NASA Astrophysics Data System (ADS)

de Brogniez, Delphine; Ballabio, Cristiano; Stevens, Antoine; Jones, Robert J. A.; Montanarella, Luca; van Wesemael, Bas

2014-05-01

There is an increasing demand for up-to-date spatially continuous organic carbon (OC) data for global environment and climatic modeling. Whilst the current map of topsoil organic carbon content for Europe (Jones et al., 2005) was produced by applying expert-knowledge based pedo-transfer rules on large soil mapping units, the aim of this study was to replace it by applying digital soil mapping techniques on the first European harmonised geo-referenced topsoil (0-20 cm) database, which arises from the LUCAS (land use/cover area frame statistical survey) survey. A generalized additive model (GAM) was calibrated on 85% of the dataset (ca. 17 000 soil samples) and a backward stepwise approach selected slope, land cover, temperature, net primary productivity, latitude and longitude as environmental covariates (500 m resolution). The validation of the model (applied on 15% of the dataset), gave an R2 of 0.27. We observed that most organic soils were under-predicted by the model and that soils of Scandinavia were also poorly predicted. The model showed an RMSE of 42 g kg-1 for mineral soils and of 287 g kg-1 for organic soils. The map of predicted OC content showed the lowest values in Mediterranean countries and in croplands across Europe, whereas highest OC content were predicted in wetlands, woodlands and in mountainous areas. The map of standard error of the OC model predictions showed high values in northern latitudes, wetlands, moors and heathlands, whereas low uncertainty was mostly found in croplands. A comparison of our results with the map of Jones et al. (2005) showed a general agreement on the prediction of mineral soils' OC content, most probably because the models use some common covariates, namely land cover and temperature. Our model however failed to predict values of OC content greater than 200 g kg-1, which we explain by the imposed unimodal distribution of our model, whose mean is tilted towards the majority of soils, which are mineral. Finally, average OC content predictions for each land cover class compared well between models, with our model always showing smaller standard deviations. We concluded that the chosen model and covariates are appropriate for the prediction of OC content in European mineral soils. We presented in this work the first map of topsoil OC content at European scale based on a harmonised soil dataset. The associated uncertainty map shall support the end-users in a careful use of the predictions.

Thematic accuracy assessment of the 2011 National Land Cover Database (NLCD)

USGS Publications Warehouse

Wickham, James; Stehman, Stephen V.; Gass, Leila; Dewitz, Jon; Sorenson, Daniel G.; Granneman, Brian J.; Poss, Richard V.; Baer, Lori Anne

2017-01-01

Accuracy assessment is a standard protocol of National Land Cover Database (NLCD) mapping. Here we report agreement statistics between map and reference labels for NLCD 2011, which includes land cover for ca. 2001, ca. 2006, and ca. 2011. The two main objectives were assessment of agreement between map and reference labels for the three, single-date NLCD land cover products at Level II and Level I of the classification hierarchy, and agreement for 17 land cover change reporting themes based on Level I classes (e.g., forest loss; forest gain; forest, no change) for three change periods (2001–2006, 2006–2011, and 2001–2011). The single-date overall accuracies were 82%, 83%, and 83% at Level II and 88%, 89%, and 89% at Level I for 2011, 2006, and 2001, respectively. Many class-specific user's accuracies met or exceeded a previously established nominal accuracy benchmark of 85%. Overall accuracies for 2006 and 2001 land cover components of NLCD 2011 were approximately 4% higher (at Level II and Level I) than the overall accuracies for the same components of NLCD 2006. The high Level I overall, user's, and producer's accuracies for the single-date eras in NLCD 2011 did not translate into high class-specific user's and producer's accuracies for many of the 17 change reporting themes. User's accuracies were high for the no change reporting themes, commonly exceeding 85%, but were typically much lower for the reporting themes that represented change. Only forest loss, forest gain, and urban gain had user's accuracies that exceeded 70%. Lower user's accuracies for the other change reporting themes may be attributable to the difficulty in determining the context of grass (e.g., open urban, grassland, agriculture) and between the components of the forest-shrubland-grassland gradient at either the mapping phase, reference label assignment phase, or both. NLCD 2011 user's accuracies for forest loss, forest gain, and urban gain compare favorably with results from other land cover change accuracy assessments.

High-Resolution Sequence-Function Mapping of Full-Length Proteins

PubMed Central

Kowalsky, Caitlin A.; Klesmith, Justin R.; Stapleton, James A.; Kelly, Vince; Reichkitzer, Nolan; Whitehead, Timothy A.

2015-01-01

Comprehensive sequence-function mapping involves detailing the fitness contribution of every possible single mutation to a gene by comparing the abundance of each library variant before and after selection for the phenotype of interest. Deep sequencing of library DNA allows frequency reconstruction for tens of thousands of variants in a single experiment, yet short read lengths of current sequencers makes it challenging to probe genes encoding full-length proteins. Here we extend the scope of sequence-function maps to entire protein sequences with a modular, universal sequence tiling method. We demonstrate the approach with both growth-based selections and FACS screening, offer parameters and best practices that simplify design of experiments, and present analytical solutions to normalize data across independent selections. Using this protocol, sequence-function maps covering full sequences can be obtained in four to six weeks. Best practices introduced in this manuscript are fully compatible with, and complementary to, other recently published sequence-function mapping protocols. PMID:25790064

High Resolution Mapping of Genetic Factors Affecting Abdominal Bristle Number in Drosophila Melanogaster

PubMed Central

Long, A. D.; Mullaney, S. L.; Reid, L. A.; Fry, J. D.; Langley, C. H.; Mackay, TFC.

1995-01-01

Factors responsible for selection response for abdominal bristle number and correlated responses in sternopleural bristle number were mapped to the X and third chromosome of Drosophila melanogaster. Lines divergent for high and low abdominal bristle number were created by 25 generations of artificial selection from a large base population, with an intensity of 25 individuals of each sex selected from 100 individuals of each sex scored per generation. Isogenic chromosome substitution lines in which the high (H) X or third chromosome were placed in an isogenic low (L) background were derived from the selection lines and from the 93 recombinant isogenic (RI) HL X and 67 RI chromosome 3 lines constructed from them. Highly polymorphic neutral r00 transposable elements were hybridized in situ to the polytene chromosomes of the RI lines to create a set of cytogenetic markers. These techniques yielded a dense map with an average spacing of 4 cM between informative markers. Factors affecting bristle number, and relative viability of the chromosome 3 RI lines, were mapped using a multiple regression interval mapping approach, conditioning on all markers >/=10 cM from the tested interval. Two factors with large effects on abdominal bristle number were mapped on the X chromosome and five factors on the third chromosome. One factor with a large effect on sternopleural bristle number was mapped to the X and two were mapped to the third chromosome; all factors with sternopleural effects corresponded to those with effects on abdominal bristle number. Two of the chromosome 3 factors with large effects on abdominal bristle number were also associated with reduced viability. Significant sex-specific effects and epistatic interactions between mapped factors of the same order of magnitude as the additive effects were observed. All factors mapped to the approximate positions of likely candidate loci (ASC, bb, emc, h, mab, Dl and E(spl)), previously characterized by mutations with large effects on bristle number. PMID:7768438

Map and database of Quaternary faults and folds in Colombia and its offshore regions

USGS Publications Warehouse

Paris, Gabriel; Machette, Michael N.; Dart, Richard L.; Haller, Kathleen M.

2000-01-01

As part of the International Lithosphere Program’s “World Map of Major Active Faults,” the U.S. Geological Survey (USGS) is assisting in the compilation of a series of digital maps of Quaternary faults and folds in Western Hemisphere countries. The maps show the locations, ages, and activity rates of major earthquake-related features such as faults and fault-related folds. They are accompanied by databases that describe these features and document current information on their activity in the Quaternary. Top date, the project has published fault and fold maps for Costa Rica (Montero and others, 1998), Panama (Cowan and others, 1998), Venezuela (Audemard and others, 2000), Bolovia/Chile (Lavenu, and others, 2000), and Argentina (Costa and others, 2000). The project is a key part of the Global Seismic Hazards Assessment Program (ILP Project II-0) for the International Decade for Natural Hazard Disaster Reduction.

aMAP is a validated pipeline for registration and segmentation of high-resolution mouse brain data

PubMed Central

Niedworok, Christian J.; Brown, Alexander P. Y.; Jorge Cardoso, M.; Osten, Pavel; Ourselin, Sebastien; Modat, Marc; Margrie, Troy W.

2016-01-01

The validation of automated image registration and segmentation is crucial for accurate and reliable mapping of brain connectivity and function in three-dimensional (3D) data sets. While validation standards are necessarily high and routinely met in the clinical arena, they have to date been lacking for high-resolution microscopy data sets obtained from the rodent brain. Here we present a tool for optimized automated mouse atlas propagation (aMAP) based on clinical registration software (NiftyReg) for anatomical segmentation of high-resolution 3D fluorescence images of the adult mouse brain. We empirically evaluate aMAP as a method for registration and subsequent segmentation by validating it against the performance of expert human raters. This study therefore establishes a benchmark standard for mapping the molecular function and cellular connectivity of the rodent brain. PMID:27384127

High-performance iron oxide nanoparticles for magnetic particle imaging - guided hyperthermia (hMPI)

NASA Astrophysics Data System (ADS)

Bauer, Lisa M.; Situ, Shu F.; Griswold, Mark A.; Samia, Anna Cristina S.

2016-06-01

Magnetic particle imaging (MPI) is an emerging imaging modality that allows the direct and quantitative mapping of iron oxide nanoparticles. In MPI, the development of tailored iron oxide nanoparticle tracers is paramount to achieving high sensitivity and good spatial resolution. To date, most MPI tracers being developed for potential clinical applications are based on spherical undoped magnetite nanoparticles. For the first time, we report on the systematic investigation of the effects of changes in chemical composition and shape anisotropy on the MPI performance of iron oxide nanoparticle tracers. We observed a 2-fold enhancement in MPI signal through selective doping of magnetite nanoparticles with zinc. Moreover, we demonstrated focused magnetic hyperthermia heating by adapting the field gradient used in MPI. By saturating the iron oxide nanoparticles outside of a field free region (FFR) with an external static field, we can selectively heat a target region in our test sample. By comparing zinc-doped magnetite cubic nanoparticles with undoped spherical nanoparticles, we could show a 5-fold improvement in the specific absorption rate (SAR) in magnetic hyperthermia while providing good MPI signal, thereby demonstrating the potential for high-performance focused hyperthermia therapy through an MPI-guided approach (hMPI).Magnetic particle imaging (MPI) is an emerging imaging modality that allows the direct and quantitative mapping of iron oxide nanoparticles. In MPI, the development of tailored iron oxide nanoparticle tracers is paramount to achieving high sensitivity and good spatial resolution. To date, most MPI tracers being developed for potential clinical applications are based on spherical undoped magnetite nanoparticles. For the first time, we report on the systematic investigation of the effects of changes in chemical composition and shape anisotropy on the MPI performance of iron oxide nanoparticle tracers. We observed a 2-fold enhancement in MPI signal through selective doping of magnetite nanoparticles with zinc. Moreover, we demonstrated focused magnetic hyperthermia heating by adapting the field gradient used in MPI. By saturating the iron oxide nanoparticles outside of a field free region (FFR) with an external static field, we can selectively heat a target region in our test sample. By comparing zinc-doped magnetite cubic nanoparticles with undoped spherical nanoparticles, we could show a 5-fold improvement in the specific absorption rate (SAR) in magnetic hyperthermia while providing good MPI signal, thereby demonstrating the potential for high-performance focused hyperthermia therapy through an MPI-guided approach (hMPI). Electronic supplementary information (ESI) available: Detailed IONP synthetic methods, description of magnetic particle relaxometer set-up, TEM of reference IONP (Senior Scientific PrecisionMRX™ 25 nm oleic acid-coated nanoparticles), concentration dependent PSF of all IONP samples, PSF and SAR of Zn-Sph and Zn-Cube mixture sample, upper right quadrant of field-dependent hysteresis curve labelled with static field strengths, and the magnetic hyperthermia temperature profiles with and without the presence of external magnetic fields. See DOI: 10.1039/c6nr01877g

Geochemical maps showing the distribution and abundance of selected elements in stream-sediment samples, Solomon and Bendeleben 1 degree by 3 degree quadrangles, Seward Peninsula, Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Smith, S.C.; King, H.D.; O'Leary, R.M.

Geochemical maps showing the distribution and abundance of selected elements in stream-sediment samples, Solomon and Bendeleben 1{degree} by 3{degree} quadrangles, Seward Peninsula, Alaska is presented.

Artificial-epitope mapping for CK-MB assay.

PubMed

Tai, Dar-Fu; Ho, Yi-Fang; Wu, Cheng-Hsin; Lin, Tzu-Chieh; Lu, Kuo-Hao; Lin, Kun-Shian

2011-06-07

A quantitative method using artificial antibody to detect creatine kinases was developed. Linear epitope sequences were selected based on an artificial-epitope mapping strategy. Nine different MIPs corresponding to the selected peptides were then fabricated on QCM chips. The subtle conformational changes were also recognized by these chips.

Pollen-inferred quantitative reconstructions of Holocene land-cover in NW Europe for the evaluation of past climate-vegetation feedbacks - methods and first maps of the cover of plant functional types at 6000, 3000, 600, 200 and 0 BP.

NASA Astrophysics Data System (ADS)

Trondman, Anna-Kari; Gaillard, Marie-José; Sugita, Shinya; Mazier, Florence; Fyfe, Ralph; Nielsen, Anne-Birgitte; Leydet, Michelle; Members, Landclim

2010-05-01

Quantitative estimates of land-cover changes during the Holocene have become increasingly important for a better understanding of the earth surface-atmosphere feedbacks, and refining climate models. The LANDCLIM project and research network (sponsored by the Swedish [VR] and Nordic [NordForsk] Research Councils) (see Gaillard et al., CL 1.22) have the objective to quantify human-induced changes in regional land-cover in NW Europe during the Holocene, and to evaluate the effects of these changes on the regional climate through altered feedbacks. We use the REVEALS model to estimate the percentage cover of groups of taxa (plant functional types, PFTs) from fossil pollen data. The past cover of PFTs will be compared with the outputs of the LPJ-GUESS, a widely-used dynamic vegetation model, and applied as an alternative to the simulated LPG-GUESS vegetation to run the regional climate model RCA3 for the past. The REVEALS model requires raw pollen counts, site radius, pollen productivity estimates (PPEs), and fall speed of pollen (FS). PPEs and FS are available for 34 taxa in the study area. The study area is divided between four principle investigators within the LANDCLIM project. A protocol was established in order to standardize the strategy and methods applied to prepare the pollen data and run REVEALS. It includes instructions for both data contributors and users on 1) chronologies, 2) pollen taxa and harmonization with the PPEs available, and 3) number of pollen taxa and datasets of PPEs to use in alternative test runs. New age-depth models were performed for several records to ensure consistency in the chronologies. The pollen records are selected from pollen databases, i.e. the European Pollen Database (EPD), the Czech Pollen Database (PALYCZ) and the Alpine Pollen Database (ALPDABA), as well as obtained directly from the authors. Using the pollen records of the Czech Pollen Database, the effect on the REVEALS estimates of 1) basin type (lakes or bogs), 2) number of pollen taxa, 3) PPEs dataset, and 4) number of dates per record used to establish the chronology (≥3 or ≥5) was tested (see Mazier et al. CL 1.21). Following the results of these tests, the first maps are based on REVEALS runs using pollen records from both lakes and bogs with ≥3 dates, 24 taxa (entomophilous taxa excluded), and the mean of all PPEs available in the study area. The maps are produced for 10 PFTs (LPJ-GUESS) and 3 PFTs (RCA3) at a spatial resolution of 1o x 1o for five selected time windows of the Holocene with contrasting human-induced land-cover (0-100 cal BP, 100-350 cal BP, 350-700 cal BP, 2700-3200 cal BP and 5700-6200 cal BP). The maps of PFTs show significant changes in the degree of human-induced vegetation openness through the Holocene over most of the study area. There are large discrepancies between these first quantitative land-cover maps and earlier maps based on pollen data and other methods such as biomization and the modern analogue approach. * The following LANDCLIM members are acknowledged for providing pollen records and for help with pollen databases: Teija Alenius (Espoo), Heather Almquist-Jacobson (Montana, USA), Lena Barnekow and Thomas Persson (Lund), Jonas Bergman (Stockholm), Anne Bjune and John Birks (Bergen), Thomas Giesecke (Göttingen), Rixt de Jong (Bern), Mihkel Kangur and Tiiuu Koff (Tallinn), Malgorzata Latalowa (Gdansk), Ann-Marie Robertsson (Stockholm), Ulf Segerström and Henrik von Stedingk (Umeå), Heikki Seppä (Helsinki). Sugita, S. 2007. The Holocene, 17, 229-241.

Enhancing the resilience of Idaho's transportation system to natural hazards and climate change.

DOT National Transportation Integrated Search

2015-07-01

This research compiled information on past landslides, including date-referencing and geo-locating events; analyzed and mapped variables : contributing to slide susceptibility; demonstrated the conditions of the future climate models that may increas...

Hazards, Disasters, and The National Map

USGS Publications Warehouse

Carswell, William J.; Newell, Mark R.

2009-01-01

Federal, State, and local response and management personnel must have current, reliable, and easily accessible geographic information and maps to prepare for, respond to, or recover from emergency situations. In life-threatening events, such as earthquakes, floods, or wildland fires, geographic information is essential for locating critical infrastructure and carrying out evacuation and rescue operations. The USGS promotes partnerships to ensure that base map data are up to date, readily available, and shareable among local, state, and National users. The National Map enables other government agencies, private industry, and the public to link and share additional data that provide even more information. These efforts with state and local governments have helped standardize the data by reducing data inconsistencies between neighboring jurisdictions and will help fill in the gaps for those places where data are lacking.

Awake surgery between art and science. Part II: language and cognitive mapping

PubMed Central

Talacchi, Andrea; Santini, Barbara; Casartelli, Marilena; Monti, Alessia; Capasso, Rita; Miceli, Gabriele

Summary Direct cortical and subcortical stimulation has been claimed to be the gold standard for exploring brain function. In this field, efforts are now being made to move from intraoperative naming-assisted surgical resection towards the use of other language and cognitive tasks. However, before relying on new protocols and new techniques, we need a multi-staged system of evidence (low and high) relating to each step of functional mapping and its clinical validity. In this article we examine the possibilities and limits of brain mapping with the aid of a visual object naming task and various other tasks used to date. The methodological aspects of intraoperative brain mapping, as well as the clinical and operative settings, were discussed in Part I of this review. PMID:24139658

Comparing Digital Flood Insurance Rate Maps (DFIRMs) to Interferometric Synthetic Aperture Radar (IFSAR) Products

DTIC Science & Technology

2000-09-01

specifications and procedures call for the use of Digital Orthophoto Quarter Quadrangles (DOQs) produced by the USGS to be the default base map if...egm96.html (14 September 2000). USGS. “Digital Orthophoto Quadrangles”, http://www-wmc.wr.usgs.gov/doq (7 November 2000). United States Naval...Technologies Inc. Global Terrain Metadata File (DEM) File Creation date: Wednesday, June 02, 1999 Tile Identifier #: GT1N36W075H8V1.bil Project Area

Beach Point Test Site, Aberdeen Proving Ground, Edgewood Area, Maryland. Focused Feasibility Study, Final Project Work Plan

DTIC Science & Technology

1993-10-01

Disposal Act (SWDA)/Resource Conservation and Recovery Act (RCRA). Jacobs Englnwfng Gmo Inc FINAL PROJECT WORK PLAN Washington Operatvo 8~ Fs 2-551I Date...shaded map of contaminated areas defined by chemical data, more than one map may be consructed f special and grapk cons *tft ame encountered. Results...that a Siophysical c ao p Pro rma down the axis or Beah PointS using geophysic teehnozoglosts that are •vi subsurface hyd&rosAdgraphic cmal beneath

Online selective kernel-based temporal difference learning.

PubMed

Chen, Xingguo; Gao, Yang; Wang, Ruili

2013-12-01

In this paper, an online selective kernel-based temporal difference (OSKTD) learning algorithm is proposed to deal with large scale and/or continuous reinforcement learning problems. OSKTD includes two online procedures: online sparsification and parameter updating for the selective kernel-based value function. A new sparsification method (i.e., a kernel distance-based online sparsification method) is proposed based on selective ensemble learning, which is computationally less complex compared with other sparsification methods. With the proposed sparsification method, the sparsified dictionary of samples is constructed online by checking if a sample needs to be added to the sparsified dictionary. In addition, based on local validity, a selective kernel-based value function is proposed to select the best samples from the sample dictionary for the selective kernel-based value function approximator. The parameters of the selective kernel-based value function are iteratively updated by using the temporal difference (TD) learning algorithm combined with the gradient descent technique. The complexity of the online sparsification procedure in the OSKTD algorithm is O(n). In addition, two typical experiments (Maze and Mountain Car) are used to compare with both traditional and up-to-date O(n) algorithms (GTD, GTD2, and TDC using the kernel-based value function), and the results demonstrate the effectiveness of our proposed algorithm. In the Maze problem, OSKTD converges to an optimal policy and converges faster than both traditional and up-to-date algorithms. In the Mountain Car problem, OSKTD converges, requires less computation time compared with other sparsification methods, gets a better local optima than the traditional algorithms, and converges much faster than the up-to-date algorithms. In addition, OSKTD can reach a competitive ultimate optima compared with the up-to-date algorithms.

Flood inundation map library, Fort Kent, Maine

USGS Publications Warehouse

Lombard, Pamela J.

2012-01-01

Severe flooding occurred in northern Maine from April 28 to May 1, 2008, and damage was extensive in the town of Fort Kent (Lombard, 2010). Aroostook County was declared a Federal disaster area on May 9, 2008. The extent of flooding on both the Fish and St. John Rivers during this event showed that the current Federal Emergency Management Agency (FEMA) Flood Insurance Study (FIS) and Flood Insurance Rate Map (FIRM) (Federal Emergency Management Agency, 1979) were out of date. The U.S. Geological Survey (USGS) conducted a study to develop a flood inundation map library showing the areas and depths for a range of flood stages from bankfull to the flood of record for Fort Kent to complement an updated FIS (Federal Emergency Management Agency, in press). Hydrologic analyses that support the maps include computer models with and without the levee and with various depths of backwater on the Fish River. This fact sheet describes the methods used to develop the maps and describes how the maps can be accessed.

Comparative mapping and rapid karyotypic evolution in the genus helianthus.

PubMed Central

Burke, John M; Lai, Zhao; Salmaso, Marzia; Nakazato, Takuya; Tang, Shunxue; Heesacker, Adam; Knapp, Steven J; Rieseberg, Loren H

2004-01-01

Comparative genetic linkage maps provide a powerful tool for the study of karyotypic evolution. We constructed a joint SSR/RAPD genetic linkage map of the Helianthus petiolaris genome and used it, along with an integrated SSR genetic linkage map derived from four independent H. annuus mapping populations, to examine the evolution of genome structure between these two annual sunflower species. The results of this work indicate the presence of 27 colinear segments resulting from a minimum of eight translocations and three inversions. These 11 rearrangements are more than previously suspected on the basis of either cytological or genetic map-based analyses. Taken together, these rearrangements required a minimum of 20 chromosomal breakages/fusions. On the basis of estimates of the time since divergence of these two species (750,000-1,000,000 years), this translates into an estimated rate of 5.5-7.3 chromosomal rearrangements per million years of evolution, the highest rate reported for any taxonomic group to date. PMID:15166168

Landmarks selection in street map design

NASA Astrophysics Data System (ADS)

Kao, C. J.

2014-02-01

In Taiwan many electrical maps present their landmarks according to the category of the feature, a designer short of knowledge about mental representation of space, can cause the map to lose its communication effects. To resolve this map design problem, in this research through long-term memory recall, navigation and observation, and short-term memory processing 111 participants were asked to select the proper landmark from study area. The results reveal that in Taiwan convenience stores are the most popular local landmark in rural and urban areas. Their commercial signs have a unique design and bright color. Contrasted to their background, this makes the convenience store a salient feature. This study also developed a rule to assess the priority of the landmarks to design them in different scale maps.

PPDMs-a resource for mapping small molecule bioactivities from ChEMBL to Pfam-A protein domains.

PubMed

Kruger, Felix A; Gaulton, Anna; Nowotka, Michal; Overington, John P

2015-03-01

PPDMs is a resource that maps small molecule bioactivities to protein domains from the Pfam-A collection of protein families. Small molecule bioactivities mapped to protein domains add important precision to approaches that use protein sequence searches alignments to assist applications in computational drug discovery and systems and chemical biology. We have previously proposed a mapping heuristic for a subset of bioactivities stored in ChEMBL with the Pfam-A domain most likely to mediate small molecule binding. We have since refined this mapping using a manual procedure. Here, we present a resource that provides up-to-date mappings and the possibility to review assigned mappings as well as to participate in their assignment and curation. We also describe how mappings provided through the PPDMs resource are made accessible through the main schema of the ChEMBL database. The PPDMs resource and curation interface is available at https://www.ebi.ac.uk/chembl/research/ppdms/pfam_maps. The source-code for PPDMs is available under the Apache license at https://github.com/chembl/pfam_maps. Source code is available at https://github.com/chembl/pfam_map_loader to demonstrate the integration process with the main schema of ChEMBL. © The Author 2014. Published by Oxford University Press.

DyKOSMap: A framework for mapping adaptation between biomedical knowledge organization systems.

PubMed

Dos Reis, Julio Cesar; Pruski, Cédric; Da Silveira, Marcos; Reynaud-Delaître, Chantal

2015-06-01

Knowledge Organization Systems (KOS) and their associated mappings play a central role in several decision support systems. However, by virtue of knowledge evolution, KOS entities are modified over time, impacting mappings and potentially turning them invalid. This requires semi-automatic methods to maintain such semantic correspondences up-to-date at KOS evolution time. We define a complete and original framework based on formal heuristics that drives the adaptation of KOS mappings. Our approach takes into account the definition of established mappings, the evolution of KOS and the possible changes that can be applied to mappings. This study experimentally evaluates the proposed heuristics and the entire framework on realistic case studies borrowed from the biomedical domain, using official mappings between several biomedical KOSs. We demonstrate the overall performance of the approach over biomedical datasets of different characteristics and sizes. Our findings reveal the effectiveness in terms of precision, recall and F-measure of the suggested heuristics and methods defining the framework to adapt mappings affected by KOS evolution. The obtained results contribute and improve the quality of mappings over time. The proposed framework can adapt mappings largely automatically, facilitating thus the maintenance task. The implemented algorithms and tools support and minimize the work of users in charge of KOS mapping maintenance. Copyright © 2015 Elsevier Inc. All rights reserved.

Seismic Line Location Map Hot Pot Project, Humboldt County, Nevada 2010

DOE Data Explorer

Lane, Michael

2010-01-01

Seismic Line Location Map Hot Pot Project, Humboldt County, Nevada 2010. ArcGIS map package containing topographic base map, Township and Range layer, Oski BLM and private leases at time of survey, and locations, with selected shot points, of the five seismic lines.

Dating Choices of High School Students

ERIC Educational Resources Information Center

Hansen, Sally L.

1977-01-01

Dating is experienced by most adolescents in our society as a prelude to mate selection. White and black youth (N=354) were studied to measure their dating-mating choices. Implications for teachers and practitioners, based on racial and gender differences, as well as perceived peer group influences are discussed. (Author)

Height as a Basis for Interpersonal Attraction.

ERIC Educational Resources Information Center

Hensley, Wayne E.

1994-01-01

Findings from 594 college students indicated that, although complementary standard may be used in hypothetical date selection, actual height of chosen person was more likely to be made on step function. Found no dating consequences for female in height-related sense; taller males enjoyed dating advantage, although advantage seemed to diminish when…

Radiostratigraphy and age structure of the Greenland Ice Sheet

PubMed Central

MacGregor, Joseph A; Fahnestock, Mark A; Catania, Ginny A; Paden, John D; Prasad Gogineni, S; Young, S Keith; Rybarski, Susan C; Mabrey, Alexandria N; Wagman, Benjamin M; Morlighem, Mathieu

2015-01-01

Several decades of ice-penetrating radar surveys of the Greenland and Antarctic ice sheets have observed numerous widespread internal reflections. Analysis of this radiostratigraphy has produced valuable insights into ice sheet dynamics and motivates additional mapping of these reflections. Here we present a comprehensive deep radiostratigraphy of the Greenland Ice Sheet from airborne deep ice-penetrating radar data collected over Greenland by The University of Kansas between 1993 and 2013. To map this radiostratigraphy efficiently, we developed new techniques for predicting reflection slope from the phase recorded by coherent radars. When integrated along track, these slope fields predict the radiostratigraphy and simplify semiautomatic reflection tracing. Core-intersecting reflections were dated using synchronized depth-age relationships for six deep ice cores. Additional reflections were dated by matching reflections between transects and by extending reflection-inferred depth-age relationships using the local effective vertical strain rate. The oldest reflections, dating to the Eemian period, are found mostly in the northern part of the ice sheet. Within the onset regions of several fast-flowing outlet glaciers and ice streams, reflections typically do not conform to the bed topography. Disrupted radiostratigraphy is also observed in a region north of the Northeast Greenland Ice Stream that is not presently flowing rapidly. Dated reflections are used to generate a gridded age volume for most of the ice sheet and also to determine the depths of key climate transitions that were not observed directly. This radiostratigraphy provides a new constraint on the dynamics and history of the Greenland Ice Sheet. Key Points Phase information predicts reflection slope and simplifies reflection tracing Reflections can be dated away from ice cores using a simple ice flow model Radiostratigraphy is often disrupted near the onset of fast ice flow PMID:26213664

A first generation BAC-based physical map of the rainbow trout genome

PubMed Central

Palti, Yniv; Luo, Ming-Cheng; Hu, Yuqin; Genet, Carine; You, Frank M; Vallejo, Roger L; Thorgaard, Gary H; Wheeler, Paul A; Rexroad, Caird E

2009-01-01

Background Rainbow trout (Oncorhynchus mykiss) are the most-widely cultivated cold freshwater fish in the world and an important model species for many research areas. Coupling great interest in this species as a research model with the need for genetic improvement of aquaculture production efficiency traits justifies the continued development of genomics research resources. Many quantitative trait loci (QTL) have been identified for production and life-history traits in rainbow trout. A bacterial artificial chromosome (BAC) physical map is needed to facilitate fine mapping of QTL and the selection of positional candidate genes for incorporation in marker-assisted selection (MAS) for improving rainbow trout aquaculture production. This resource will also facilitate efforts to obtain and assemble a whole-genome reference sequence for this species. Results The physical map was constructed from DNA fingerprinting of 192,096 BAC clones using the 4-color high-information content fingerprinting (HICF) method. The clones were assembled into physical map contigs using the finger-printing contig (FPC) program. The map is composed of 4,173 contigs and 9,379 singletons. The total number of unique fingerprinting fragments (consensus bands) in contigs is 1,185,157, which corresponds to an estimated physical length of 2.0 Gb. The map assembly was validated by 1) comparison with probe hybridization results and agarose gel fingerprinting contigs; and 2) anchoring large contigs to the microsatellite-based genetic linkage map. Conclusion The production and validation of the first BAC physical map of the rainbow trout genome is described in this paper. We are currently integrating this map with the NCCCWA genetic map using more than 200 microsatellites isolated from BAC end sequences and by identifying BACs that harbor more than 300 previously mapped markers. The availability of an integrated physical and genetic map will enable detailed comparative genome analyses, fine mapping of QTL, positional cloning, selection of positional candidate genes for economically important traits and the incorporation of MAS into rainbow trout breeding programs. PMID:19814815

EPA Guidelines for States Regarding Online Asbestos Model Accreditation Plan (MAP) Annual Refresher Training

EPA Pesticide Factsheets

Memorandum dated July 9, 2007 from the Chief of the Fibers and Organics Branch, National Chemicals Program Division, Office of Prevention, Pesticides and Toxic Substances to EPA Regional Asbestos Coordinators and State Regulatory Stakeholders.

MapA, an iron-regulated, cytoplasmic membrane protein in the cyanobacterium Synechococcus sp. strain PCC7942.

PubMed

Webb, R; Troyan, T; Sherman, D; Sherman, L A

1994-08-01

Growth of Synechococcus sp. strain PCC 7942 in iron-deficient media leads to the accumulation of an approximately 34-kDa protein. The gene encoding this protein, mapA (membrane-associated protein A), has been cloned and sequenced (GenBank accession number, L01621). The mapA transcript is not detectable in normally grown cultures but is stably accumulated by cells grown in iron-deficient media. However, the promoter sequence for this gene does not resemble other bacterial iron-regulated promoters described to date. The carboxyl-terminal region of the derived amino acid sequence of MapA resembles bacterial proteins involved in iron acquisition, whereas the amino-terminal end of MapA has a high degree of amino acid identity with the abundant, chloroplast envelope protein E37. An approach employing improved cellular fractionation techniques as well as electron microscopy and immunocytochemistry was essential in localizing MapA protein to the cytoplasmic membrane of Synechococcus sp. strain PCC 7942. When these cells were grown under iron-deficient conditions, a significant fraction of MapA could also be localized to the thylakoid membranes.

Use of Mapping and Spatial and Space-Time Modeling Approaches in Operational Control of Aedes aegypti and Dengue

PubMed Central

Eisen, Lars; Lozano-Fuentes, Saul

2009-01-01

The aims of this review paper are to 1) provide an overview of how mapping and spatial and space-time modeling approaches have been used to date to visualize and analyze mosquito vector and epidemiologic data for dengue; and 2) discuss the potential for these approaches to be included as routine activities in operational vector and dengue control programs. Geographical information system (GIS) software are becoming more user-friendly and now are complemented by free mapping software that provide access to satellite imagery and basic feature-making tools and have the capacity to generate static maps as well as dynamic time-series maps. Our challenge is now to move beyond the research arena by transferring mapping and GIS technologies and spatial statistical analysis techniques in user-friendly packages to operational vector and dengue control programs. This will enable control programs to, for example, generate risk maps for exposure to dengue virus, develop Priority Area Classifications for vector control, and explore socioeconomic associations with dengue risk. PMID:19399163

ShakeMap manual: technical manual, user's guide, and software guide

USGS Publications Warehouse

Wald, David J.; Worden, Bruce C.; Quitoriano, Vincent; Pankow, Kris L.

2005-01-01

ShakeMap (http://earthquake.usgs.gov/shakemap) --rapidly, automatically generated shaking and intensity maps--combines instrumental measurements of shaking with information about local geology and earthquake location and magnitude to estimate shaking variations throughout a geographic area. The results are rapidly available via the Web through a variety of map formats, including Geographic Information System (GIS) coverages. These maps have become a valuable tool for emergency response, public information, loss estimation, earthquake planning, and post-earthquake engineering and scientific analyses. With the adoption of ShakeMap as a standard tool for a wide array of users and uses came an impressive demand for up-to-date technical documentation and more general guidelines for users and software developers. This manual is meant to address this need. ShakeMap, and associated Web and data products, are rapidly evolving as new advances in communications, earthquake science, and user needs drive improvements. As such, this documentation is organic in nature. We will make every effort to keep it current, but undoubtedly necessary changes in operational systems take precedence over producing and making documentation publishable.

Comparison of peanut gentics and physical maps provided insights on collinearity, reversions and translocations

USDA-ARS?s Scientific Manuscript database

Genetic and physical maps are the valuable resources for peanut research community in understanding genome organization and serving as the basis for map-based cloning and marker-assisted selection. Physical maps of two diploid wild peanut progenitor species, Arachis duranensis (A genome) and A. ipae...

Cognitive Processes in Orienteering: A Review.

ERIC Educational Resources Information Center

Seiler, Roland

1996-01-01

Reviews recent research on information processing and decision making in orienteering. The main cognitive demands investigated were selection of relevant map information for route choice, comparison between map and terrain in map reading and in relocation, and quick awareness of mistakes. Presents a model of map reading based on results. Contains…

Will phenotypic plasticity affecting flowering phenology keep pace with climate change?

PubMed

Richardson, Bryce A; Chaney, Lindsay; Shaw, Nancy L; Still, Shannon M

2017-06-01

Rising temperatures have begun to shift flowering time, but it is unclear whether phenotypic plasticity can accommodate projected temperature change for this century. Evaluating clines in phenological traits and the extent and variation in plasticity can provide key information on assessing risk of maladaptation and developing strategies to mitigate climate change. In this study, flower phenology was examined in 52 populations of big sagebrush (Artemisia tridentata) growing in three common gardens. Flowering date (anthesis) varied 91 days from late July to late November among gardens. Mixed-effects modeling explained 79% of variation in flowering date, of which 46% could be assigned to plasticity and genetic variation in plasticity and 33% to genetics (conditional R 2  = 0.79, marginal R 2  = 0.33). Two environmental variables that explained the genetic variation were photoperiod and the onset of spring, the Julian date of accumulating degree-days >5 °C reaching 100. The genetic variation was mapped for contemporary and future climates (decades 2060 and 2090), showing flower date change varies considerably across the landscape. Plasticity was estimated to accommodate, on average, a ±13-day change in flowering date. However, the examination of genetic variation in plasticity suggests that the magnitude of plasticity could be affected by variation in the sensitivity to photoperiod and temperature. In a warmer common garden, lower-latitude populations have greater plasticity (+16 days) compared to higher-latitude populations (+10 days). Mapped climatypes of flowering date for contemporary and future climates illustrate the wide breadth of plasticity and large geographic overlap. Our research highlights the importance of integrating information on genetic variation, phenotypic plasticity and climatic niche modeling to evaluate plant responses and elucidate vulnerabilities to climate change. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.

A Modified Relative Spectral Mixture Analysis to Extract the Fractions of Major Land Cover Components

NASA Astrophysics Data System (ADS)

Jia, S.

2015-12-01

As an effective method of extracting land cover fractions based on spectral endmembers, spectral mixture analysis (SMA) has been applied using remotely sensed imagery in different spatial, temporal, and spectral resolutions. A number of studies focused on arid/semiarid ecosystem have used SMA to obtain the land cover fractions of GV, NPV/litter, and bare soil (BS) using MODIS reflectance products to understand ecosystem phenology, track vegetation dynamics, and evaluate the impact of major disturbances. However, several challenges remain in the application of SMA in studying ecosystem phenology, including obtaining high quality endmembers and increasing computational efficiency when considering to long time series that cover a broad spatial extent. Okin (2007) proposes a variation of SMA, named as relative spectra mixture analysis (RSMA) to address the latter challenge by calculating the relative change of fraction of GV, NPV/litter, and BS compared with a baseline date. This approach assumes that the baseline image contains the spectral information of the bare soil that can be used as an endmember for spectral mixture analysis though it is mixed with the spectral reflectance of other non-soil land cover types. Using the baseline image, one can obtain the change of fractions of GV, NPV/litter, BS, and snow compared with the baseline image. However, RSMA results depend on the selection of baseline date and the fractional components during this date. In this study, we modified the strategy of implementing RSMA by introducing a step of obtaining a soil map as the baseline image using multiple-endmember SMA (MESMA) before applying RSMA. The fractions of land cover components from this modified RSMA are also validated using the field observations from two study area in semiarid savanna and grassland of Queensland, Australia.

An integrated genetic map based on four mapping populations and quantitative trait loci associated with economically important traits in watermelon (Citrullus lanatus)

PubMed Central

2014-01-01

Background Modern watermelon (Citrullus lanatus L.) cultivars share a narrow genetic base due to many years of selection for desirable horticultural qualities. Wild subspecies within C. lanatus are important potential sources of novel alleles for watermelon breeding, but successful trait introgression into elite cultivars has had limited success. The application of marker assisted selection (MAS) in watermelon is yet to be realized, mainly due to the past lack of high quality genetic maps. Recently, a number of useful maps have become available, however these maps have few common markers, and were constructed using different marker sets, thus, making integration and comparative analysis among maps difficult. The objective of this research was to use single-nucleotide polymorphism (SNP) anchor markers to construct an integrated genetic map for C. lanatus. Results Under the framework of the high density genetic map, an integrated genetic map was constructed by merging data from four independent mapping experiments using a genetically diverse array of parental lines, which included three subspecies of watermelon. The 698 simple sequence repeat (SSR), 219 insertion-deletion (InDel), 36 structure variation (SV) and 386 SNP markers from the four maps were used to construct an integrated map. This integrated map contained 1339 markers, spanning 798 cM with an average marker interval of 0.6 cM. Fifty-eight previously reported quantitative trait loci (QTL) for 12 traits in these populations were also integrated into the map. In addition, new QTL identified for brix, fructose, glucose and sucrose were added. Some QTL associated with economically important traits detected in different genetic backgrounds mapped to similar genomic regions of the integrated map, suggesting that such QTL are responsible for the phenotypic variability observed in a broad array of watermelon germplasm. Conclusions The integrated map described herein enhances the utility of genomic tools over previous watermelon genetic maps. A large proportion of the markers in the integrated map are SSRs, InDels and SNPs, which are easily transferable across laboratories. Moreover, the populations used to construct the integrated map include all three watermelon subspecies, making this integrated map useful for the selection of breeding traits, identification of QTL, MAS, analysis of germplasm and commercial hybrid seed detection. PMID:24443961

QTL mapping and candidate genes for resistance to Fusarium ear rot and fumonisin contamination in maize.

PubMed

Maschietto, Valentina; Colombi, Cinzia; Pirona, Raul; Pea, Giorgio; Strozzi, Francesco; Marocco, Adriano; Rossini, Laura; Lanubile, Alessandra

2017-01-21

Fusarium verticillioides is a common maize pathogen causing ear rot (FER) and contamination of the grains with the fumonisin B1 (FB1) mycotoxin. Resistance to FER and FB1 contamination are quantitative traits, affected by environmental conditions, and completely resistant maize genotypes to the pathogen are so far unknown. In order to uncover genomic regions associated to reduced FER and FB1 contamination and identify molecular markers for assisted selection, an F 2:3 population of 188 progenies was developed crossing CO441 (resistant) and CO354 (susceptible) genotypes. FER severity and FB1 contamination content were evaluated over 2 years and sowing dates (early and late) in ears artificially inoculated with F. verticillioides by the use of either side-needle or toothpick inoculation techniques. Weather conditions significantly changed in the two phenotyping seasons and FER and FB1 content distribution significantly differed in the F 3 progenies according to the year and the sowing time. Significant positive correlations (P < 0.01) were detected between FER and FB1 contamination, ranging from 0.72 to 0.81. A low positive correlation was determined between FB1 contamination and silking time (DTS). A genetic map was generated for the cross, based on 41 microsatellite markers and 342 single nucleotide polymorphisms (SNPs) derived from Genotyping-by-Sequencing (GBS). QTL analyses revealed 15 QTLs for FER, 17 QTLs for FB1 contamination and nine QTLs for DTS. Eight QTLs located on linkage group (LG) 1, 2, 3, 6, 7 and 9 were in common between FER and FB1, making possible the selection of genotypes with both low disease severity and low fumonisin contamination. Moreover, five QTLs on LGs 1, 2, 4, 5 and 9 located close to previously reported QTLs for resistance to other mycotoxigenic fungi. Finally, 24 candidate genes for resistance to F. verticillioides are proposed combining previous transcriptomic data with QTL mapping. This study identified a set of QTLs and candidate genes that could accelerate breeding for resistance of maize lines showing reduced disease severity and low mycotoxin contamination determined by F. verticillioides.

Change detection over Sokolov open-pit mining area, Czech Republic, using multi-temporal HyMAP data (2009-2010)

NASA Astrophysics Data System (ADS)

Adar, S.; Notesco, G.; Brook, A.; Livne, I.; Rojik, P.; Kopacková, V.; Zelenkova, K.; Misurec, J.; Bourguignon, A.; Chevrel, S.; Ehrler, C.; Fisher, C.; Hanus, J.; Shkolnisky, Y.; Ben Dor, E.

2011-11-01

Two HyMap images acquired over the same lignite open-pit mining site in Sokolov, Czech Republic, during the summers of 2009 and 2010 (12 months apart), were investigated in this study. The site selected for this research is one of three test sites (the others being in South Africa and Kyrgyzstan) within the framework of the EO-MINERS FP7 Project (http://www.eo-miners.eu). The goal of EO-MINERS is to "integrate new and existing Earth Observation tools to improve best practice in mining activities and to reduce the mining related environmental and societal footprint". Accordingly, the main objective of the current study was to develop hyperspectral-based means for the detection of small spectral changes and to relate these changes to possible degradation or reclamation indicators of the area under investigation. To ensure significant detection of small spectral changes, the temporal domain was investigated along with careful generation of reflectance information. Thus, intensive spectroradiometric ground measurements were carried out to ensure calibration and validation aspects during both overflights. The performance of these corrections was assessed using the Quality Indicators setup developed under a different FP7 project-EUFAR (http://www.eufar.net), which helped select the highest quality data for further work. This approach allows direct distinction of the real information from noise. The reflectance images were used as input for the application of spectral-based change-detection algorithms and indices to account for small and reliable changes. The related algorithms were then developed and applied on a pixel-by-pixel basis to map spectral changes over the space of a year. Using field spectroscopy and ground truth measurements on both overpass dates, it was possible to explain the results and allocate spatial kinetic processes of the environmental changes during the time elapsed between the flights. It was found, for instance, that significant spectral changes are capable of revealing mineral processes, vegetation status and soil formation long before these are apparent to the naked eye. Further study is being conducted under the above initiative to extend this approach to other mining areas worldwide and to improve the robustness of the developed algorithm.

Advanced concentration analysis of atom probe tomography data: Local proximity histograms and pseudo-2D concentration maps.

PubMed

Felfer, Peter; Cairney, Julie

2018-06-01

Analysing the distribution of selected chemical elements with respect to interfaces is one of the most common tasks in data mining in atom probe tomography. This can be represented by 1D concentration profiles, 2D concentration maps or proximity histograms, which represent concentration, density etc. of selected species as a function of the distance from a reference surface/interface. These are some of the most useful tools for the analysis of solute distributions in atom probe data. In this paper, we present extensions to the proximity histogram in the form of 'local' proximity histograms, calculated for selected parts of a surface, and pseudo-2D concentration maps, which are 2D concentration maps calculated on non-flat surfaces. This way, local concentration changes at interfaces or and other structures can be assessed more effectively. Copyright © 2018 Elsevier B.V. All rights reserved.

Spring temperatures influence selection on breeding date and the potential for phenological mismatch in a migratory bird

PubMed Central

Soukup, Sheryl Swartz; Drilling, Nancy E.; Eckerle, Kevin P.; Sakaluk, Scott K.; Thompson, Charles F.

2016-01-01

Climate change has affected the seasonal phenology of a variety of taxa, including that of migratory birds and their critical food resources. However, whether climate-induced changes in breeding phenology affect individual fitness, and how these changes might, therefore, influence selection on breeding date remain unresolved. Here, we use a 36-year dataset from a long-term, individual-based study of House Wrens (Troglodytes aedon) to test whether the timing of avian breeding seasons is associated with annual changes in temperature, which have increased to a small but significant extent locally since the onset of the study in 1980. Increasing temperature was associated with an advancement of breeding date in the population, as the onset of breeding within years was closely associated with daily spring temperatures. Warmer springs were also associated with a reduced incubation period, but reduced incubation periods were associated with a prolonged duration of nestling provisioning. Nest productivity, in terms of fledgling production, was not associated with temperature, but wetter springs reduced fledging success. Most years were characterized by selection for earlier breeding, but cool and wet years resulted in stabilizing selection on breeding date. Our results indicate that climate change and increasing spring temperatures can affect suites of life-history traits, including selection on breeding date. Increasing temperatures may favor earlier breeding, but the extent to which the phenology of populations might advance may be constrained by reductions in fitness associated with early breeding during cool, wet years. Variability in climatic conditions will, therefore, shape the extent to which seasonal organisms can respond to changes in their environment. PMID:27859132

Relative dating of Hawaiian lava flows using multispectral thermal infrared images - A new tool for geologic mapping of young volcanic terranes

NASA Technical Reports Server (NTRS)

Kahle, Anne B.; Gillespie, Alan R.; Abbott, Elsa A.; Abrams, Michael J.; Walker, Richard E.

1988-01-01

The weathering of Hawaiian basalts in arid and semiarid environments is accompanied by changes in their thermal infrared emittance spectra. The spectral differences can be measured and mapped with multispectral imaging systems. The differences appear to be related to the degree of development, preservation, and alteration of glassy crusts; the oxidation of iron; and the accretion of silica-rich surface veneers. Because the measurements are quantitative and in image format, they are useful for estimating relative ages in geologic mapping of lava flows. In Hawaii this technique is most diagnostic for distinguishing among sparsely vegetated flows less than 1.5 ka in age.

Six easy steps on how to create a lean sigma value stream map for a multidisciplinary clinical operation.

PubMed

Lee, Emily; Grooms, Richard; Mamidala, Soumya; Nagy, Paul

2014-12-01

Value stream mapping (VSM) is a very useful technique to visualize and quantify the complex workflows often seen in clinical environments. VSM brings together multidisciplinary teams to identify parts of processes, collect data, and develop interventional ideas. An example involving pediatric MRI with general anesthesia VSM is outlined. As the process progresses, the map shows a large delay between the fax referral and the date of the scheduled and registered appointment. Ideas for improved efficiency and metrics were identified to measure improvement within a 6-month period, and an intervention package was developed for the department. Copyright © 2014. Published by Elsevier Inc.

Characterization and Amplification of Gene-Based Simple Sequence Repeat (SSR) Markers in Date Palm.

PubMed

Zhao, Yongli; Keremane, Manjunath; Prakash, Channapatna S; He, Guohao

2017-01-01

The paucity of molecular markers limits the application of genetic and genomic research in date palm (Phoenix dactylifera L.). Availability of expressed sequence tag (EST) sequences in date palm may provide a good resource for developing gene-based markers. This study characterizes a substantial fraction of transcriptome sequences containing simple sequence repeats (SSRs) from the EST sequences in date palm. The EST sequences studied are mainly homologous to those of Elaeis guineensis and Musa acuminata. A total of 911 gene-based SSR markers, characterized with functional annotations, have provided a useful basis not only for discovering candidate genes and understanding genetic basis of traits of interest but also for developing genetic and genomic tools for molecular research in date palm, such as diversity study, quantitative trait locus (QTL) mapping, and molecular breeding. The procedures of DNA extraction, polymerase chain reaction (PCR) amplification of these gene-based SSR markers, and gel electrophoresis of PCR products are described in this chapter.

Saturation of an intra-gene pool linkage map: toward unified consensus linkage map in common bean

USDA-ARS?s Scientific Manuscript database

Map-based cloning to find genes of interest and marker assisted selection (MAS) requires good genetic maps with high reproducible markers. In this study, we saturated the linkage map of the intra-gene pool population of common bean DOR364×BAT477 (DB) by evaluating 2,706 molecular markers in includin...

Alternative Fuels Data Center: Maps and Data

Science.gov Websites

Biofuelsatlas BioFuels Atlas is an interactive map for comparing biomass feedstocks and biofuels by location . This tool helps users select from and apply biomass data layers to a map, as well as query and download State Biodiesel-stations View Map Graph E85-stations-map E85 Fueling Station Locations by State E85

Data selection techniques in the interpretation of MAGSAT data over Australia

NASA Technical Reports Server (NTRS)

Johnson, B. D.; Dampney, C. N. G.

1983-01-01

The MAGSAT data require critical selection in order to produce a self-consistent data set suitable for map construction and subsequent interpretation. Interactive data selection techniques are described which involve the use of a special-purpose profile-oriented data base and a colour graphics display. The careful application of these data selection techniques permits validation every data value and ensures that the best possible self-consistent data set is being used to construct the maps of the magnetic field measured at satellite altitudes over Australia.

Global small-scale lunar cartography

NASA Technical Reports Server (NTRS)

Lipskiy, Y. N.; Pskovskiy, Y. P.; Rodionova, Z. F.; Shevchenko, V. V.; Chikmachev, V. I.; Volchkova, L. I.

1972-01-01

The primary sources information for compiling this map were the photographs of the visible hemisphere obtained by earth-based observatories, the Luna 3 and Zond 3 pictures, and a small number of Lunar Orbiter pictures. The primary content of the complete lunar map is the surface relief and its tonal characteristics. In preparing the map, particular attention was devoted to the variety of lunar relief forms. The color spectrum of the map was selected not only for the natural coloring of the lunar surface, but also with the objective of achieving maximum expressiveness. A lunar globe to scale 1:10 million was prepared along with the preparation of the map. The scale of the globe, half that of the map, led to some selection and generalization of the relief forms. The globe permits maintaining simultaneously geometric similarity of contours, exact proportions of areas, and identical scales in all directions. The globe was prepared in both the Latin and Russian languages.

BOREAS TE-23 Map Plot Data

NASA Technical Reports Server (NTRS)

Rich, Paul M.; Fournier, Robert; Hall, Forrest G. (Editor); Papagno, Andrea (Editor)

2000-01-01

The Boreal Ecosystem-Atmospheric Study (BOREAS) TE-23 (Terrestrial Ecology) team collected map plot data in support of its efforts to characterize and interpret information on canopy architecture and understory cover at the BOREAS tower flux sites and selected auxiliary sites from May to August 1994. Mapped plots (typical dimensions 50 m x 60 m) were set up and characterized at all BOREAS forested tower flux and selected auxiliary sites. Detailed measurement of the mapped plots included: (1) stand characteristics (location, density, basal area); (2) map locations diameter at breast height (DBH) of all trees; (3) detailed geometric measures of a subset of trees (height, crown dimensions); and (4) understory cover maps. The data are stored in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

Investigation of selected imagery from SKYLAB/EREP S190 system for medium and small scale mapping

NASA Technical Reports Server (NTRS)

Stewart, R. A.

1975-01-01

Satellite photography provided by the Skylab mission was investigated as a tool in planimetric mapping at medium and small scales over land surface in Canada. The main interest involved the potential usage of Skylab imagery for new and revision line mapping, photomapping possibilities, and the application of this photography as control for conventional high altitude aerial surveys. The results of six independent investigations clearly indicate that certain selected sets of this photography are adequate for planimetric mapping purposes at scales of 1:250,000 and smaller. In limited cases, the NATO planimetric accuracy requirements for Class B 1:50,000 scale mapping were also achieved. Of the S190A photography system, the camera containing the Pan X Aerial Black and White film offers the greatest potential to mapping at small scales. However, the S190B system continually proved to offer more versatility throughout the entire investigation.

The evolution of internet-based map server applications in the United States Department of Agriculture, Veterinary Services.

PubMed

Maroney, Susan A; McCool, Mary Jane; Geter, Kenneth D; James, Angela M

2007-01-01

The internet is used increasingly as an effective means of disseminating information. For the past five years, the United States Department of Agriculture (USDA) Veterinary Services (VS) has published animal health information in internet-based map server applications, each oriented to a specific surveillance or outbreak response need. Using internet-based technology allows users to create dynamic, customised maps and perform basic spatial analysis without the need to buy or learn desktop geographic information systems (GIS) software. At the same time, access can be restricted to authorised users. The VS internet mapping applications to date are as follows: Equine Infectious Anemia Testing 1972-2005, National Tick Survey tick distribution maps, the Emergency Management Response System-Mapping Module for disease investigations and emergency outbreaks, and the Scrapie mapping module to assist with the control and eradication of this disease. These services were created using Environmental Systems Research Institute (ESRI)'s internet map server technology (ArcIMS). Other leading technologies for spatial data dissemination are ArcGIS Server, ArcEngine, and ArcWeb Services. VS is prototyping applications using these technologies, including the VS Atlas of Animal Health Information using ArcGIS Server technology and the Map Kiosk using ArcEngine for automating standard map production in the case of an emergency.

Missouri Assessment Program (MAP), Spring 2000: Elementary Health/Physical Education, Released Items, Grade 5.

ERIC Educational Resources Information Center

Missouri State Dept. of Elementary and Secondary Education, Jefferson City.

This document presents 10 released items from the Health/Physical Education Missouri Assessment Program (MAP) test given in the spring of 2000 to fifth graders. Items from the test sessions include: selected-response (multiple choice), constructed-response, and a performance event. The selected-response items consist of individual questions…

Transcriptome sequencing for high throughput SNP development and genetic mapping in Pea

PubMed Central

2014-01-01

Background Pea has a complex genome of 4.3 Gb for which only limited genomic resources are available to date. Although SNP markers are now highly valuable for research and modern breeding, only a few are described and used in pea for genetic diversity and linkage analysis. Results We developed a large resource by cDNA sequencing of 8 genotypes representative of modern breeding material using the Roche 454 technology, combining both long reads (400 bp) and high coverage (3.8 million reads, reaching a total of 1,369 megabases). Sequencing data were assembled and generated a 68 K unigene set, from which 41 K were annotated from their best blast hit against the model species Medicago truncatula. Annotated contigs showed an even distribution along M. truncatula pseudochromosomes, suggesting a good representation of the pea genome. 10 K pea contigs were found to be polymorphic among the genetic material surveyed, corresponding to 35 K SNPs. We validated a subset of 1538 SNPs through the GoldenGate assay, proving their ability to structure a diversity panel of breeding germplasm. Among them, 1340 were genetically mapped and used to build a new consensus map comprising a total of 2070 markers. Based on blast analysis, we could establish 1252 bridges between our pea consensus map and the pseudochromosomes of M. truncatula, which provides new insight on synteny between the two species. Conclusions Our approach created significant new resources in pea, i.e. the most comprehensive genetic map to date tightly linked to the model species M. truncatula and a large SNP resource for both academic research and breeding. PMID:24521263

Retrieval of Spatio-temporal Evaporation by Integrating Landsat OLI Optical and Thermal Data

NASA Astrophysics Data System (ADS)

Wandera, L. N.; Tol, C. V. D.; Mallick, K.; Bayat, B.; Verbeiren, B.; van Griensven, A.; Verhoef, W.; Suliga, J.; Barrios, J. M.; Chormański, J.; Kleniewska, M.

2017-12-01

Soil-Vegetation-Atmosphere (SVAT) Transfer Models are capable of providing continuous predictions of evapotranspiration (ET). However, providing these models with reliable spatio-temporal information of vegetation and soil properties remains challenging. Thus, combining optical and thermal satellite information might assists to overcome this challenge when using SVAT models. In this study, using a radiative transfer model of solar and sky radiation (RTMo), we simulate Landsat 8 reflectance bands (2-7). We then apply a numerical optimization approach to invert the model and retrieve the corresponding canopy attributes leaf chlorophyll content (Cab), leaf water content (Cw), leaf dry matter content (Cdm), leaf brown material (Cs), Leaf Area Index (LAI) and the leaf angle distribution function in the canopy at overpass time. The retrievals are then directly used as inputs into our SVAT model of choice, Soil Canopy Observations of Photochemistry and Energy Fluxes (SCOPE). Using a model for transfer of thermal radiation emitted by vegetation and soil (RTMt), we proceed to simulate Landsat radiance for the corresponding reflectance data using a lookup table (LUT). These variables were then used to develop a crop factor (Kc) map. A reference ET was generated and applied to the Kc map to obtain actual ET. We proceeded to interpolate the ET between the image acquisition dates to have a complete time series. The retrieval maps for the specific variables captured seasonal variability patterns for the respective variables. The generated KC map showed similar trend with the LAI maps. There was an underestimation of actual ET when the simulation was not constrained to the thermal information. The interpolation of ET between acquisition image dates reflected the seasonal trends. Key Word: SVAT, optical, thermal, remote sensing, evapotranspiration

Imaging Small-scale Seafloor and Sub-seafloor Tectonic Fabric Using Satellite Altimetry

NASA Astrophysics Data System (ADS)

Sandwell, D. T.; Müller, D.; Matthews, K. J.; Smith, W. H. F.

2017-12-01

Marine gravity anomalies derived from satellite radar altimetry now provide an unprecedented resolution of about 7 km for mapping small-scale seafloor and sub-seafloor tectonic fabric. These gravity maps are improving rapidly because three satellite altimeters are currently collecting data with dense track coverage: (1) CryoSat-2 has routinely collected altimetry data over ice, land, and ocean since July 2010. The satellite has a long 369-day repeat cycle resulting in an average ground track spacing of 3.5 km at the equator. To date it has completed more than 7 geodetic mappings of the ocean surface. (2) The SARAL AltiKa altimeter began a non-repeat orbit phase in July 2016. AltiKa has a new Ka-band instrument with a factor of 2 better range precision than all previous altimeters. (3) Jason-2 was placed in a geodetic orbit starting July 2017. It has lower inclination coverage to provide improved gravity recovery for N-S trending anomalies. These data combined with sparse soundings will provide a dramatic improvement in predicted bathymetry and thus help guide future deep ocean surveys. The most recent global marine gravity anomaly map based on these geodetic mission data with 2-pass retracking for optimal range precision has an accuracy that is 2-4 times better than the maps derived from Geosat and ERS-1. The new data reveal the detailed fabric of fracture zones, previously unmapped, now extinct oceanic microplates in the central Pacific, and fault networks buried beneath thick sediments along continental margins. By combining satellite altimetry with marine magnetic anomalies and seafloor age dates from rock samples we are able to pinpoint the geometry and age of major plate reorganizations, particularly the enigmatic 100 Ma event, which occurred during the Cretaceous Magnetic Superchron.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ellis, J.M.

Remote sensing allows the petroleum industry to make better and quicker interpretations of geological and environmental conditions in areas of present and future operations. Often remote sensing (including aerial photographs) is required because existing maps are out-of-date, too small of scale, or provide only limited information. Implementing remote sensing can lead to lower project costs and reduced risk. The same satellite and airborne data can be used effectively for both geological and environmental applications. For example, earth scientists can interpret new lithologic, structural, and geomorphic information from near-infrared and radar imagery in terrains as diverse as barren desert and tropicalmore » jungle. Environmental applications with these and other imagery include establishing baselines, assessing impact by documenting changes through time, and mapping land-use, habitat, and vegetation. Higher resolution sensors provide an up-to-date overview of onshore and offshore petroleum facilities, whereas sensors capable of oblique viewing can be used to generate topographic maps. Geological application in Yemen involved merging Landsat TM and SPOT imagery to obtain exceptional lithologic discrimination. In the Congo, a topographic map to plan field operations was interpreted from the overlapping radar strips. Landsat MSS and TM, SPOT, and Russian satellite images with new aerial photographs are being used in the Tengiz supergiant oil field of Kazakhstan to help establish an environmental baseline, generate a base map, locate wells, plan facilities, and support a geographical information system (GIS). In the Niger delta, Landsat TM and SPOT are being used to plan pipeline routes and seismic lines, and to monitor rapid shoreline changes and population growth. Accurate coastlines, facility locations, and shoreline types are being extracted from satellite images for use in oil spill models.« less

Channels selection using independent component analysis and scalp map projection for EEG-based driver fatigue classification.

PubMed

Rifai Chai; Naik, Ganesh R; Sai Ho Ling; Tran, Yvonne; Craig, Ashley; Nguyen, Hung T

2017-07-01

This paper presents a classification of driver fatigue with electroencephalography (EEG) channels selection analysis. The system employs independent component analysis (ICA) with scalp map back projection to select the dominant of EEG channels. After channel selection, the features of the selected EEG channels were extracted based on power spectral density (PSD), and then classified using a Bayesian neural network. The results of the ICA decomposition with the back-projected scalp map and a threshold showed that the EEG channels can be reduced from 32 channels into 16 dominants channels involved in fatigue assessment as chosen channels, which included AF3, F3, FC1, FC5, T7, CP5, P3, O1, P4, P8, CP6, T8, FC2, F8, AF4, FP2. The result of fatigue vs. alert classification of the selected 16 channels yielded a sensitivity of 76.8%, specificity of 74.3% and an accuracy of 75.5%. Also, the classification results of the selected 16 channels are comparable to those using the original 32 channels. So, the selected 16 channels is preferable for ergonomics improvement of EEG-based fatigue classification system.

Development of a Land Use Mapping and Monitoring Protocol for the High Plains Region: A Multitemporal Remote Sensing Application

NASA Technical Reports Server (NTRS)

Price, Kevin P.; Nellis, M. Duane

1996-01-01

The purpose of this project was to develop a practical protocol that employs multitemporal remotely sensed imagery, integrated with environmental parameters to model and monitor agricultural and natural resources in the High Plains Region of the United States. The value of this project would be extended throughout the region via workshops targeted at carefully selected audiences and designed to transfer remote sensing technology and the methods and applications developed. Implementation of such a protocol using remotely sensed satellite imagery is critical for addressing many issues of regional importance, including: (1) Prediction of rural land use/land cover (LULC) categories within a region; (2) Use of rural LULC maps for successive years to monitor change; (3) Crop types derived from LULC maps as important inputs to water consumption models; (4) Early prediction of crop yields; (5) Multi-date maps of crop types to monitor patterns related to crop change; (6) Knowledge of crop types to monitor condition and improve prediction of crop yield; (7) More precise models of crop types and conditions to improve agricultural economic forecasts; (8;) Prediction of biomass for estimating vegetation production, soil protection from erosion forces, nonpoint source pollution, wildlife habitat quality and other related factors; (9) Crop type and condition information to more accurately predict production of biogeochemicals such as CO2, CH4, and other greenhouse gases that are inputs to global climate models; (10) Provide information regarding limiting factors (i.e., economic constraints of pumping, fertilizing, etc.) used in conjunction with other factors, such as changes in climate for predicting changes in rural LULC; (11) Accurate prediction of rural LULC used to assess the effectiveness of government programs such as the U.S. Soil Conservation Service (SCS) Conservation Reserve Program; and (12) Prediction of water demand based on rural LULC that can be related to rates of draw-down of underground water supplies.

Object-Based Land Use Classification of Agricultural Land by Coupling Multi-Temporal Spectral Characteristics and Phenological Events in Germany

NASA Astrophysics Data System (ADS)

Knoefel, Patrick; Loew, Fabian; Conrad, Christopher

2015-04-01

Crop maps based on classification of remotely sensed data are of increased attendance in agricultural management. This induces a more detailed knowledge about the reliability of such spatial information. However, classification of agricultural land use is often limited by high spectral similarities of the studied crop types. More, spatially and temporally varying agro-ecological conditions can introduce confusion in crop mapping. Classification errors in crop maps in turn may have influence on model outputs, like agricultural production monitoring. One major goal of the PhenoS project ("Phenological structuring to determine optimal acquisition dates for Sentinel-2 data for field crop classification"), is the detection of optimal phenological time windows for land cover classification purposes. Since many crop species are spectrally highly similar, accurate classification requires the right selection of satellite images for a certain classification task. In the course of one growing season, phenological phases exist where crops are separable with higher accuracies. For this purpose, coupling of multi-temporal spectral characteristics and phenological events is promising. The focus of this study is set on the separation of spectrally similar cereal crops like winter wheat, barley, and rye of two test sites in Germany called "Harz/Central German Lowland" and "Demmin". However, this study uses object based random forest (RF) classification to investigate the impact of image acquisition frequency and timing on crop classification uncertainty by permuting all possible combinations of available RapidEye time series recorded on the test sites between 2010 and 2014. The permutations were applied to different segmentation parameters. Then, classification uncertainty was assessed and analysed, based on the probabilistic soft-output from the RF algorithm at the per-field basis. From this soft output, entropy was calculated as a spatial measure of classification uncertainty. The results indicate that uncertainty estimates provide a valuable addition to traditional accuracy assessments and helps the user to allocate error in crop maps.

Berry and phenology-related traits in grapevine (Vitis vinifera L.): From Quantitative Trait Loci to underlying genes

PubMed Central

Costantini, Laura; Battilana, Juri; Lamaj, Flutura; Fanizza, Girolamo; Grando, Maria Stella

2008-01-01

Background The timing of grape ripening initiation, length of maturation period, berry size and seed content are target traits in viticulture. The availability of early and late ripening varieties is desirable for staggering harvest along growing season, expanding production towards periods when the fruit gets a higher value in the market and ensuring an optimal plant adaptation to climatic and geographic conditions. Berry size determines grape productivity; seedlessness is especially demanded in the table grape market and is negatively correlated to fruit size. These traits result from complex developmental processes modified by genetic, physiological and environmental factors. In order to elucidate their genetic determinism we carried out a quantitative analysis in a 163 individuals-F1 segregating progeny obtained by crossing two table grape cultivars. Results Molecular linkage maps covering most of the genome (2n = 38 for Vitis vinifera) were generated for each parent. Eighteen pairs of homologous groups were integrated into a consensus map spanning over 1426 cM with 341 markers (mainly microsatellite, AFLP and EST-derived markers) and an average map distance between loci of 4.2 cM. Segregating traits were evaluated in three growing seasons by recording flowering, veraison and ripening dates and by measuring berry size, seed number and weight. QTL (Quantitative Trait Loci) analysis was carried out based on single marker and interval mapping methods. QTLs were identified for all but one of the studied traits, a number of them steadily over more than one year. Clusters of QTLs for different characters were detected, suggesting linkage or pleiotropic effects of loci, as well as regions affecting specific traits. The most interesting QTLs were investigated at the gene level through a bioinformatic analysis of the underlying Pinot noir genomic sequence. Conclusion Our results revealed novel insights into the genetic control of relevant grapevine features. They provide a basis for performing marker-assisted selection and testing the role of specific genes in trait variation. PMID:18419811

24 CFR 891.610 - Selection and admission of tenants.

Code of Federal Regulations, 2010 CFR

2010-04-01

... occupancy requirements. For cases where domestic violence, dating violence, stalking, or criminal activity directly relating to domestic violence, dating violence, or stalking is involved or claimed to be involved...

An Atlas of ShakeMaps for Landslide and Liquefaction Modeling

NASA Astrophysics Data System (ADS)

Johnson, K. L.; Nowicki, M. A.; Mah, R. T.; Garcia, D.; Harp, E. L.; Godt, J. W.; Lin, K.; Wald, D. J.

2012-12-01

The human consequences of a seismic event are often a result of subsequent hazards induced by the earthquake, such as landslides. While the United States Geological Survey (USGS) ShakeMap and Prompt Assessment of Global Earthquakes for Response (PAGER) systems are, in conjunction, capable of estimating the damage potential of earthquake shaking in near-real time, they do not currently provide estimates for the potential of further damage by secondary processes. We are developing a sound basis for providing estimates of the likelihood and spatial distribution of landslides for any global earthquake under the PAGER system. Here we discuss several important ingredients in this effort. First, we report on the development of a standardized hazard layer from which to calibrate observed landslide distributions; in contrast, prior studies have used a wide variety of means for estimating the hazard input. This layer now takes the form of a ShakeMap, a standardized approach for computing geospatial estimates for a variety of shaking metrics (both peak ground motions and shaking intensity) from any well-recorded earthquake. We have created ShakeMaps for about 20 historical landslide "case history" events, significant in terms of their landslide occurrence, as part of an updated release of the USGS ShakeMap Atlas. We have also collected digitized landslide data from open-source databases for many of the earthquake events of interest. When these are combined with up-to-date topographic and geologic maps, we have the basic ingredients for calibrating landslide probabilities for a significant collection of earthquakes. In terms of modeling, rather than focusing on mechanistic models of landsliding, we adopt a strictly statistical approach to quantify landslide likelihood. We incorporate geology, slope, peak ground acceleration, and landslide data as variables in a logistic regression, selecting the best explanatory variables given the standardized new hazard layers (see Nowicki et al., this meeting, for more detail on the regression). To make the ShakeMap and PAGER systems more comprehensive in terms of secondary losses, we are working to calibrate a similarly constrained regression for liquefaction estimation using a suite of well-studied earthquakes for which detailed, digitized liquefaction datasets are available; here variants of wetness index and soil strength replace geology and slope. We expect that this Atlas of ShakeMaps for landslide and liquefaction case history events, which will soon be publicly available via the internet, will aid in improving the accuracy of loss-modeling systems such as PAGER, as well as allow for a common framework for numerous other mechanistic and empirical studies.

How learning might strengthen existing visual object representations in human object-selective cortex.

PubMed

Brants, Marijke; Bulthé, Jessica; Daniels, Nicky; Wagemans, Johan; Op de Beeck, Hans P

2016-02-15

Visual object perception is an important function in primates which can be fine-tuned by experience, even in adults. Which factors determine the regions and the neurons that are modified by learning is still unclear. Recently, it was proposed that the exact cortical focus and distribution of learning effects might depend upon the pre-learning mapping of relevant functional properties and how this mapping determines the informativeness of neural units for the stimuli and the task to be learned. From this hypothesis we would expect that visual experience would strengthen the pre-learning distributed functional map of the relevant distinctive object properties. Here we present a first test of this prediction in twelve human subjects who were trained in object categorization and differentiation, preceded and followed by a functional magnetic resonance imaging session. Specifically, training increased the distributed multi-voxel pattern information for trained object distinctions in object-selective cortex, resulting in a generalization from pre-training multi-voxel activity patterns to after-training activity patterns. Simulations show that the increased selectivity combined with the inter-session generalization is consistent with a training-induced strengthening of a pre-existing selectivity map. No training-related neural changes were detected in other regions. In sum, training to categorize or individuate objects strengthened pre-existing representations in human object-selective cortex, providing a first indication that the neuroanatomical distribution of learning effects depends upon the pre-learning mapping of visual object properties. Copyright © 2015 Elsevier Inc. All rights reserved.

Predicting "Hot" and "Warm" Spots for Fragment Binding.

PubMed

Rathi, Prakash Chandra; Ludlow, R Frederick; Hall, Richard J; Murray, Christopher W; Mortenson, Paul N; Verdonk, Marcel L

2017-05-11

Computational fragment mapping methods aim to predict hotspots on protein surfaces where small fragments will bind. Such methods are popular for druggability assessment as well as structure-based design. However, to date researchers developing or using such tools have had no clear way of assessing the performance of these methods. Here, we introduce the first diverse, high quality validation set for computational fragment mapping. The set contains 52 diverse examples of fragment binding "hot" and "warm" spots from the Protein Data Bank (PDB). Additionally, we describe PLImap, a novel protocol for fragment mapping based on the Protein-Ligand Informatics force field (PLIff). We evaluate PLImap against the new fragment mapping test set, and compare its performance to that of simple shape-based algorithms and fragment docking using GOLD. PLImap is made publicly available from https://bitbucket.org/AstexUK/pli .

Database for volcanic processes and geology of Augustine Volcano, Alaska

USGS Publications Warehouse

McIntire, Jacqueline; Ramsey, David W.; Thoms, Evan; Waitt, Richard B.; Beget, James E.

2012-01-01

This digital release contains information used to produce the geologic map published as Plate 1 in U.S. Geological Survey Professional Paper 1762 (Waitt and Begét, 2009). The main component of this digital release is a geologic map database prepared using geographic information systems (GIS) applications. This release also contains links to files to view or print the map plate, accompanying measured sections, and main report text from Professional Paper 1762. It should be noted that Augustine Volcano erupted in 2006, after the completion of the geologic mapping shown in Professional Paper 1762 and presented in this database. Information on the 2006 eruption can be found in U.S. Geological Survey Professional Paper 1769. For the most up to date information on the status of Alaska volcanoes, please refer to the U.S. Geological Survey Volcano Hazards Program website.

Hemichordates and the origin of chordates

NASA Technical Reports Server (NTRS)

Gerhart, John; Lowe, Christopher; Kirschner, Marc

2005-01-01

Hemichordates, the phylum of bilateral animals most closely related to chordates, could reveal the evolutionary origins of chordate traits such as the nerve cord, notochord, gill slits and tail. The anteroposterior maps of gene expression domains for 38 genes of chordate neural patterning are highly similar for hemichordates and chordates, even though hemichordates have a diffuse nerve-net. About 40% of the domains are not present in protostome maps. We propose that this map, the gill slits and the tail date to the deuterostome ancestor. The map of dorsoventral expression domains, centered on a Bmp-Chordin axis, differs between the two groups; hemichordates resemble protostomes more than they do chordates. The dorsoventral axis might have undergone extensive modification in the chordate line, including centralization of the nervous system, segregation of epidermis, derivation of the notochord, and an inversion of organization.

HISTORICAL COASTAL WETLANDS OF PRUDENCE ISLAND

EPA Science Inventory

Historical maps are useful tools to assess long-term change. The topographic surveys (T-charts) produced by the U.S. Coast and Geodedetic Survey, predecessor of the U.S.Geologic Survey (USGS), provide a rich source of information on historical environmental features dating back t...

25. Photocopy of photograph (from Division of Beaches and Parks, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

25. Photocopy of photograph (from Division of Beaches and Parks, State of California, Department of Natural REsources) Photographer unknown, Date unknown SUTTER'S MAP OF FORT WITH SUPERIMPOSED OUTLINE OF FORT - Sutter's Fort, L & Twenty-Seventh Streets, Sacramento, Sacramento County, CA

Proteomic Assessment of Poultry Spermatozoa

USDA-ARS?s Scientific Manuscript database

Fully characterizing the protein composition of spermatozoa is the first step in utilizing proteomics to delineate the function of sperm proteins. To date, sperm proteome maps have been partially developed for the human, mouse, rat, bull and several invertebrates. Here we report the first proteomic...

The logic of selecting an appropriate map projection in a Decision Support System (DSS)

USGS Publications Warehouse

Finn, Michael P.; Usery, E. Lynn; Woodard, Laura N.; Yamamoto, Kristina H.

2017-01-01

There are undeniable practical consequences to consider when choosing an appropriate map projection for a specific region. The surface of a globe covered by global, continental, and regional maps are so singular that each type distinctively affects the amount of distortion incurred during a projection transformation because of the an assortment of effects caused by distance, direction, scale , and area. A Decision Support System (DSS) for Map Projections of Small Scale Data was previously developed to help select an appropriate projection. This paper reports on a tutorial to accompany that DSS. The DSS poses questions interactively, allowing the user to decide on the parameters, which in turn determines the logic path to a solution. The objective of including a tutorial to accompany the DSS is achieved by visually representing the path of logic that is taken to a recommended map projection derived from the parameters the user selects. The tutorial informs the DSS user about the pedigree of the projection and provides a basic explanation of the specific projection design. This information is provided by informational pop-ups and other aids.

NASA: Assessments of Selected Large-Scale Projects

DTIC Science & Technology

2011-03-01

REPORT DATE MAR 2011 2. REPORT TYPE 3. DATES COVERED 00-00-2011 to 00-00-2011 4. TITLE AND SUBTITLE Assessments Of Selected Large-Scale Projects...Volatile EvolutioN MEP Mars Exploration Program MIB Mishap Investigation Board MMRTG Multi Mission Radioisotope Thermoelectric Generator MMS Magnetospheric...probes designed to explore the Martian surface, to satellites equipped with advanced sensors to study the earth , to telescopes intended to explore the

Primate occurrence across a human-impacted landscape in Guinea-Bissau and neighbouring regions in West Africa: using a systematic literature review to highlight the next conservation steps

PubMed Central

Bessa, Joana; Frazão-Moreira, Amélia; Biro, Dora; Hockings, Kimberley Jane

2018-01-01

Background West African landscapes are largely characterised by complex agroforest mosaics. Although the West African forests are considered a nonhuman primate hotspot, knowledge on the distribution of many species is often lacking and out-of-date. Considering the fast-changing nature of the landscapes in this region, up-to-date information on primate occurrence is urgently needed, particularly of taxa such as colobines, which may be more sensitive to habitat modification than others. Understanding wildlife occurrence and mechanisms of persistence in these human-dominated landscapes is fundamental for developing effective conservation strategies. Methods In this paper, we aim to review current knowledge on the distribution of three threatened primates in Guinea-Bissau and neighbouring regions, highlighting research gaps and identifying priority research and conservation action. We conducted a systematic literature review of primate studies from 1976 to 2016 in Guinea-Bissau, southern Senegal and western Guinea (Boké Region). We mapped historical observation records of chimpanzee (Pan troglodytes verus), Temminck’s red colobus (Pilicolobus badius temminckii) and king colobus (Colobus polykomos), including our preliminary survey data from Dulombi, a newly established National Park (NP) in Guinea-Bissau. Results We found 151 documents, including 87 journal articles, that contained field data on primates in this region. In Guinea-Bissau, nearly all studies focussed south of the Corubal River, including mainly Cantanhez, Cufada, and Boé NP’s. In Senegal, most of the data came from Fongoli and Niokolo-Koba NP. In Boké (Guinea) studies are few, with the most recent data coming from Sangarédi. In Dulombi NP we recorded eight primate species, including chimpanzees, red colobus and king colobus. Across the selected region, chimpanzees, red colobus and king colobus were reported in eleven, twelve and seven protected areas, respectively. Discussion Our study demonstrates large geographical research gaps particularly for the two colobines. For the first time after more than two decades, we confirm the presence of red colobus and king colobus north of the Corubal River in Guinea-Bissau. The little information available from large parts of the red colobus range raises questions regarding levels of population fragmentation in this species, particularly in Casamance and across northern Guinea-Bissau. There are still no records demonstrating the occurrence of king colobus in Senegal, and the presence of a viable population in north-eastern Guinea-Bissau remains uncertain. While the occurrence of chimpanzees in Guinea-Bissau and Senegal is well documented, data from Boké (Guinea) are sparse and out-of-date. Our approach—the mapping of data gathered from a systematic literature review—allows us to provide recommendations for selecting future geographical survey locations and planning further research and conservation strategies in this region. PMID:29844988

Monitoring strip mining and reclamation with LANDSAT data in Belmont County, Ohio

NASA Technical Reports Server (NTRS)

Witt, R. G.; Schaal, G. M.; Bly, B. G.

1983-01-01

The utility of LANDSAT digital data for mapping and monitoring surface mines in Belmont County, Ohio was investigated. Two data sets from 1976 and 1979 were processed to classify level 1 land covers and three strip mine categories in order to examine change over time and assess reclamation efforts. The two classifications were compared with aerial photographs. Results of the accuracy assessment show that both classifications are approximately 86 per cent correct, and that surface mine change detection (date-to-date comparison) is facilitated by the digital format of LANDSAT data.

Systematic Search for Gene-Gene Interaction Effect on Prostate Cancer Risk

DTIC Science & Technology

2011-07-01

PLEASE DO NOT RETURN YOUR FORM TO THE ABOVE ADDRESS. 1. REPORT DATE (DD-MM-YYYY) 2 . REPORT TYPE 3. DATES COVERED (From - To) 4. TITLE AND SUBTITLE 5a...identify SNPs in the genome that interact to have stronger effects on PCa risk in the CGEMS GWAS data, 2 ) confirm the gene-gene interaction effect on PCa...for pairs of SNPs implicated in Aim 2 among the remaining 1,893 cases and 781 controls in CAPS, and 4) fine map the genomic regions where SNPs have

Generative Topographic Mapping of Conformational Space.

PubMed

Horvath, Dragos; Baskin, Igor; Marcou, Gilles; Varnek, Alexandre

2017-10-01

Herein, Generative Topographic Mapping (GTM) was challenged to produce planar projections of the high-dimensional conformational space of complex molecules (the 1LE1 peptide). GTM is a probability-based mapping strategy, and its capacity to support property prediction models serves to objectively assess map quality (in terms of regression statistics). The properties to predict were total, non-bonded and contact energies, surface area and fingerprint darkness. Map building and selection was controlled by a previously introduced evolutionary strategy allowed to choose the best-suited conformational descriptors, options including classical terms and novel atom-centric autocorrellograms. The latter condensate interatomic distance patterns into descriptors of rather low dimensionality, yet precise enough to differentiate between close favorable contacts and atom clashes. A subset of 20 K conformers of the 1LE1 peptide, randomly selected from a pool of 2 M geometries (generated by the S4MPLE tool) was employed for map building and cross-validation of property regression models. The GTM build-up challenge reached robust three-fold cross-validated determination coefficients of Q 2 =0.7…0.8, for all modeled properties. Mapping of the full 2 M conformer set produced intuitive and information-rich property landscapes. Functional and folding subspaces appear as well-separated zones, even though RMSD with respect to the PDB structure was never used as a selection criterion of the maps. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Flank eruptions of Mt Etna during the Greek-Roman and Early Medieval periods: New data from 226Ra-230Th dating and archaeomagnetism

NASA Astrophysics Data System (ADS)

Branca, Stefano; Condomines, Michel; Tanguy, Jean-Claude

2015-10-01

In this paper, we present new data from 226Ra-230Th dating and archaeomagnetism with the aim of improving the knowledge of the flank eruptions that occurred at Mt Etna during the Greek-Roman and Early Medieval periods, as defined in the new geological map of the volcano. The combination of the two dating techniques demonstrates that three major flank eruptions occurred on the lower north and west flanks during Greek-Roman epochs, producing large scoria cones and extensive lava flows. In particular, the Mt Ruvolo and Mt Minardo events highly impacted the territory of the west flank, notably by damming the Simeto River. The new data of the Millicucco and Due Monti lava flows, on the lower north-east flank, indicate a younger age than their stratigraphic ages quoted in the 2011 geological map, since they occurred around 700 and 500 AD, respectively. None of the large flank eruptions occurring on the lower slopes of Etna during the Early Medieval age are reported in the historical sources. Overall, our paper shows that a comprehensive assessment of eruptions at Mount Etna in the last three millennia can only be achieved through a multidisciplinary approach.

Applications of hydrophilic interaction chromatography to amino acids, peptides, and proteins.

PubMed

Periat, Aurélie; Krull, Ira S; Guillarme, Davy

2015-02-01

This review summarizes the recent advances in the analysis of amino acids, peptides, and proteins using hydrophilic interaction chromatography. Various reports demonstrate the successful analysis of amino acids under such conditions. However, a baseline resolution of the 20 natural amino acids has not yet been published and for this reason, there is often a need to use mass spectrometry for detection to further improve selectivity. Hydrophilic interaction chromatography is also recognized as a powerful technique for peptide analysis, and there are a lot of papers showing its applicability for proteomic applications (peptide mapping). It is expected that its use for peptide mapping will continue to grow in the future, particularly because this analytical strategy can be combined with reversed-phase liquid chromatography, in a two-dimensional setup, to reach very high resolving power. Finally, the interest in hydrophilic interaction chromatography for intact proteins analysis is less evident due to possible solubility issues and a lack of suitable hydrophilic interaction chromatography stationary phases. To date, it has been successfully employed only for the characterization of membrane proteins, histones, and the separation of glycosylated isoforms of an intact glycoprotein. From our point of view, the number of hydrophilic interaction chromatography columns compatible with intact proteins (higher upper temperature limit, large pore size, etc.) is still too limited. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.