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Sample records for decay fungus postia

  1. Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

    SciTech Connect

    Martinez, Diego; Challacombe, Jean; Morgenstern, Ingo; Hibbett, David; Schmoll, Monika; Kubicek, Christian P.; Ferreira, Patricia; Ruiz-Duenas, Francisco; Martinez, Angel T.; Kersten, Phil; Hammel, Ken; Vanden Wymelenberg, Amber; Gaskell, Jill; Lindquist, Erika; Sabat, Gregorz; Splinter Bondurant, Sandra; Larrondo, Luis F.; Canessa, Paulo; Vicuna, Rafael; Yadev, Jagjit; Doddapaneni, Harshavardhan; Subramanian, Venkataramanan; Pisabarro, Antonio; Lavin, Jose L.; Oguiza, Jose A.; Master, Emma; Henrissat, Bernard; Coutinho, Pedro M.; Harris, Paul; Magnuson, Jon K.; Baker, Scott E.; Bruno, Kenneth S.; Kenealy, William; Hoegger, Patrik; Kues, Ursula; Ramaiya, Preethi; Lucas, Susan; Salamov, Asaf; Shapiro, Harris; Tu, Hank; Chee, Christine L.; Misra, Monica; Xie, Gary; Teter, Sarah; Yaver, Debbie; James, Tim; Mokrejs, Martin; Pospisek, Martin; Grigoriev, Igor V.; Brettin, T.; Rokhsar, Daniel S.; Berka, Randy; Cullen, Dan

    2009-02-10

    Brown-rot fungi such as Postia placenta are common inhabitants of forest ecosystems and are also largely responsible for the destructive decay of wooden structures. Rapid depolymerization of cellulose is a distinguishing feature of brown-rot, but the biochemical mechanisms and underlying genetics are poorly understood. Systematic examination of the P. placenta genome, transcriptome, and secretome revealed unique extracellular enzyme systems, including an unusual repertoire of extracellular glycoside hydrolases. Genes encoding exocellobiohydrolases and cellulose-binding domains, typical of cellulolytic microbes, are absent in this efficient cellulose-degrading fungus. When P. placenta was grown in media containing cellulose as sole carbon source, transcripts corresponding to many hemicellulases and to a single putative β-1-4 endoglucanase were expressed at high levels relative to glucose grown cultures. These transcript profiles were confirmed by direct identification of peptides by liquid chromatography-tandem mass spectrometry (LC-MS/MS). Also upregulated under cellulolytic culture conditions were putative iron reductases, quinone reductase, and structurally divergent oxidases potentially involved in extracellular generation of Fe(II) and H2O2. These observations are consistent with a biodegradative role for Fenton chemistry in which Fe(II) and H2O2 react to form hydroxyl radicals, highly reactive oxidants capable of depolymerizing cellulose. The P. placenta genome resources provide unparalleled opportunities for investigating such unusual mechanisms of cellulose conversion. More broadly, the genome offers insight into the diversification of lignocellulose degrading mechanisms in fungi. In particular, comparisons between P. placenta and the closely related white-rot fungus, Phanerochaete chrysosporium support an evolutionary shift from white-rot to brown-rot during which efficient depolymerization of lignin was lost.

  2. Genome, transcriptome, and secretome analysis of wood decay fungus postia placenta supports unique mechanisms of lignocellulose conversion

    SciTech Connect

    Martinez, Diego; Challacombe, Jean F; Misra, Monica; Xie, Gary; Brettin, Thomas; Morgenstern, Ingo; Hibbett, David; Schmoll, Monika; Kubicek, Christian P; Ferreira, Patricia; Ruiz - Duenase, Francisco J; Martinez, Angel T; Kersten, Phil; Hammel, Kenneth E; Vanden Wymelenberg, Amber; Gaskell, Jill; Lindquist, Erika; Sabati, Grzegorz; Bondurant, Sandra S; Larrondo, Luis F; Canessa, Paulo; Vicunna, Rafael; Yadavk, Jagiit; Doddapaneni, Harshavardhan; Subramaniank, Venkataramanan; Pisabarro, Antonio G; Lavin, Jose L; Oguiza, Jose A; Master, Emma; Henrissat, Bernard; Coutinho, Pedro M; Harris, Paul; Magnuson, Jon K; Baker, Scott; Bruno, Kenneth; Kenealy, William; Hoegger, Patrik J; Kues, Ursula; Ramaiva, Preethi; Lucas, Susan; Salamov, Asaf; Shapiro, Harris; Tuh, Hank; Chee, Christine L; Teter, Sarah; Yaver, Debbie; James, Tim; Mokrejs, Martin; Pospisek, Martin; Grigoriev, Igor; Rokhsar, Dan; Berka, Randy; Cullen, Dan

    2008-01-01

    Brown-rot fungi such as Postia placenta are common inhabitants of forest ecosystems and are also largely responsible for the destructive decay of wooden structures. Rapid depolymerization of cellulose is a distinguishing feature of brown-rot, but the biochemical mechanisms and underlying genetics are poorly understood. Systematic examination of the P. placenta genome, transcriptome and secretome revealed unique extracellular enzyme systems, including an unusual repertoire of extracellular glycoside hydrolases. Genes encoding exocellobiohydrolases and cellulose-binding domains, typical of cellulolytic microbes, are absent in this efficient cellulose-degrading fungus. When P. placenta was grown in medium containing cellulose as sole carbon source, transcripts corresponding to many hemicellulases and to a single putative {beta}-1-4 endoglucanase were expressed at high levels relative to glucose grown cultures. These transcript profiles were confirmed by direct identification of peptides by liquid chromatography-tandem mass spectrometry (LC{center_dot}MSIMS). Also upregulated during growth on cellulose medium were putative iron reductases, quinone reductase, and structurally divergent oxidases potentially involved in extracellular generation of Fe(II) and H202. These observations are consistent with a biodegradative role for Fenton chemistry in which Fe(II) and H202 react to form hydroxyl radicals, highly reactive oxidants capable of depolymerizing cellulose. The P. placenta genome resources provide unparalleled opportunities for investigating such unusual mechanisms of cellulose conversion. More broadly, the genome offers insight into the diversification of lignocellulose degrading mechanisms in fungi. Comparisons to the closely related white-rot fungus Phanerochaete chrysosporium support an evolutionary shift from white-rot to brown-rot during which the capacity for efficient depolymerization of lignin was lost.

  3. Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta

    PubMed Central

    Zhang, Jiwei; Presley, Gerald N.; Ryu, Jae-San; Menke, Jon R.; Figueroa, Melania; Orr, Galya; Schilling, Jonathan S.

    2016-01-01

    Wood-degrading brown rot fungi are essential recyclers of plant biomass in forest ecosystems. Their efficient cellulolytic systems, which have potential biotechnological applications, apparently depend on a combination of two mechanisms: lignocellulose oxidation (LOX) by reactive oxygen species (ROS) and polysaccharide hydrolysis by a limited set of glycoside hydrolases (GHs). Given that ROS are strongly oxidizing and nonselective, these two steps are likely segregated. A common hypothesis has been that brown rot fungi use a concentration gradient of chelated metal ions to confine ROS generation inside wood cell walls before enzymes can infiltrate. We examined an alternative: that LOX components involved in ROS production are differentially expressed by brown rot fungi ahead of GH components. We used spatial mapping to resolve a temporal sequence in Postia placenta, sectioning thin wood wafers colonized directionally. Among sections, we measured gene expression by whole-transcriptome shotgun sequencing (RNA-seq) and assayed relevant enzyme activities. We found a marked pattern of LOX up-regulation in a narrow (5-mm, 48-h) zone at the hyphal front, which included many genes likely involved in ROS generation. Up-regulation of GH5 endoglucanases and many other GHs clearly occurred later, behind the hyphal front, with the notable exceptions of two likely expansins and a GH28 pectinase. Our results support a staggered mechanism for brown rot that is controlled by differential expression rather than microenvironmental gradients. This mechanism likely results in an oxidative pretreatment of lignocellulose, possibly facilitated by expansin- and pectinase-assisted cell wall swelling, before cellulases and hemicellulases are deployed for polysaccharide depolymerization. PMID:27621450

  4. Localizing gene regulation reveals a staggered wood decay mechanism for the brown rot fungus Postia placenta.

    PubMed

    Zhang, Jiwei; Presley, Gerald N; Hammel, Kenneth E; Ryu, Jae-San; Menke, Jon R; Figueroa, Melania; Hu, Dehong; Orr, Galya; Schilling, Jonathan S

    2016-09-27

    Wood-degrading brown rot fungi are essential recyclers of plant biomass in forest ecosystems. Their efficient cellulolytic systems, which have potential biotechnological applications, apparently depend on a combination of two mechanisms: lignocellulose oxidation (LOX) by reactive oxygen species (ROS) and polysaccharide hydrolysis by a limited set of glycoside hydrolases (GHs). Given that ROS are strongly oxidizing and nonselective, these two steps are likely segregated. A common hypothesis has been that brown rot fungi use a concentration gradient of chelated metal ions to confine ROS generation inside wood cell walls before enzymes can infiltrate. We examined an alternative: that LOX components involved in ROS production are differentially expressed by brown rot fungi ahead of GH components. We used spatial mapping to resolve a temporal sequence in Postia placenta, sectioning thin wood wafers colonized directionally. Among sections, we measured gene expression by whole-transcriptome shotgun sequencing (RNA-seq) and assayed relevant enzyme activities. We found a marked pattern of LOX up-regulation in a narrow (5-mm, 48-h) zone at the hyphal front, which included many genes likely involved in ROS generation. Up-regulation of GH5 endoglucanases and many other GHs clearly occurred later, behind the hyphal front, with the notable exceptions of two likely expansins and a GH28 pectinase. Our results support a staggered mechanism for brown rot that is controlled by differential expression rather than microenvironmental gradients. This mechanism likely results in an oxidative pretreatment of lignocellulose, possibly facilitated by expansin- and pectinase-assisted cell wall swelling, before cellulases and hemicellulases are deployed for polysaccharide depolymerization. PMID:27621450

  5. Morphological Characterization and Quantification of the Mycelial Growth of the Brown-Rot Fungus Postia placenta for Modeling Purposes.

    PubMed

    Du, Huan; Lv, Pin; Ayouz, Mehdi; Besserer, Arnaud; Perré, Patrick

    2016-01-01

    Continuous observation was performed using confocal laser scanning microscopy to visualize the three-dimensional microscopic growth of the brown-rot fungus, Postia placenta, for seventeen days. The morphological characterization of Postia placenta was quantitatively determined, including the tip extension rate, branch angle and branching length, (hyphal length between two adjacent branch sites). A voxel method has been developed to measure the growth of the biomass. Additionally, the tip extension rate distribution, the branch angle distribution and the branching length distribution, which quantified the hyphal growth characteristics, were evaluated. Statistical analysis revealed that the extension rate of tips was randomly distributed in space. The branch angle distribution did not change with the development of the colony, however, the branching length distribution did vary with the development of the colony. The experimental data will be incorporated into a lattice-based model simulating the growth of Postia placenta. PMID:27602575

  6. Morphological Characterization and Quantification of the Mycelial Growth of the Brown-Rot Fungus Postia placenta for Modeling Purposes

    PubMed Central

    Lv, Pin; Ayouz, Mehdi; Besserer, Arnaud; Perré, Patrick

    2016-01-01

    Continuous observation was performed using confocal laser scanning microscopy to visualize the three-dimensional microscopic growth of the brown-rot fungus, Postia placenta, for seventeen days. The morphological characterization of Postia placenta was quantitatively determined, including the tip extension rate, branch angle and branching length, (hyphal length between two adjacent branch sites). A voxel method has been developed to measure the growth of the biomass. Additionally, the tip extension rate distribution, the branch angle distribution and the branching length distribution, which quantified the hyphal growth characteristics, were evaluated. Statistical analysis revealed that the extension rate of tips was randomly distributed in space. The branch angle distribution did not change with the development of the colony, however, the branching length distribution did vary with the development of the colony. The experimental data will be incorporated into a lattice-based model simulating the growth of Postia placenta. PMID:27602575

  7. Identification and functional characterization of a novel fungal immunomodulatory protein from Postia placenta.

    PubMed

    Li, Shu Ying; Shi, Li Jun; Ding, Yang; Nie, Ying; Tang, Xuan Ming

    2015-04-01

    In this study, a previously unknown fungal immunomodulatory protein (FIP), here called FIP-ppl, was identified from the basidiomycete fungus Postia placenta by searching its genome sequence database using known FIPs as baits, which was the first basidiomycete FIP to be identified outside the order of edible macro fungi. The gene FIP-ppl was synthesized and expressed in Escherichia coli to produce a glutathione S-transferase (GST) fusion protein. The fusion protein was purified on a GST affinity column and the protein tag was removed using in situ thrombin cleavage. The purified recombinant protein (rFIP-ppl) displayed hemagglutination activity toward rabbit red blood cells but not against human red blood cells. RFIP-ppl stimulated mouse splenocyte cell proliferation and enhanced interleukin-2 (IL-2) release. Antitumor assays indicated that rFIP-ppl had significant cell proliferation inhibitory activity and apoptotic effects in human tumor cells with more pronounced inhibiting proliferation and inducing apoptotic effects on gastric tumor cells (MGC823) than against hepatoma (HepG2) cells. This study confirms an alternative means of identifying, producing, and isolating new FIPs. It may provide convenient access to FIP-ppl with potential human therapeutic applications.

  8. Inferring outcrossing in the homothallic fungus Sclerotinia sclerotiorum using linkage disequilibrium decay

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The occurrence and frequency of outcrossing in homothallic fungal species in nature is an unresolved question. Here we report detection of frequent outcrossing in the homothallic fungus Sclerotinia sclerotiorum. In using multilocus linkage disequilibrium (LD) to infer recombination among microsatell...

  9. Report of wood decay fungus Inonotus tropicalis (phylum Basidiomycota) from a dog with a granulomatous mediastinal mass.

    PubMed

    Sheppard, Barbara J; McGrath, Elizabeth; Giuffrida, Michelle; Craft, Serena L M; Kung, Chung Yee; Smith, Matthew E

    2013-09-01

    A 75.9-kg, 3.5-year-old male Irish Wolfhound dog with a 2-3-week history of gagging and eating difficulties was referred to the University of Florida Veterinary Medical Hospital (Gainesville, Florida) for evaluation of a large cranial mediastinal mass suspected to be a thymoma or lymphosarcoma. The patient had 4 months of nearly 10 kg progressive weight loss with severe flank sensitivity and radiographically apparent lumbar vertebral changes interpreted as discospondylitis. Lab work revealed hyperglobulinemia, mild proteinuria, normal T4, negative Brucella canis titer, and negative blood and urine bacterial cultures. A thoracotomy revealed a nonresectable, destructive, space-occupying mediastinal mass resulting in euthanasia without surgical recovery. Biopsies from the mass were collected during surgery for histology. Microscopic examination revealed extensive granulomatous cellulitis and lymphadenitis characterized by central cavitated necrotic areas containing debris and degenerate neutrophils, intermediate zones of fibrovascular proliferation with marked mixed inflammation, peripheral fibrosis, frequent multinucleated macrophages, and scattered mineralization. The necrotic material contained dense mats of 2 µm wide by 8-15 µm long fungal hyphae with parallel walls, acute angle branching, frequent septae, and occasional bulb-like dilations. DNA sequencing and phylogenetic analysis of the internal transcribed spacer region confirmed the presence of a fungus in the Inonotus tropicalis group. Inonotus tropicalis is primarily a wood decay fungus that is found on dead wood from angiosperms in tropical and subtropical habitats. Isolates of the I. tropicalis group have been detected a few times from immunosuppressed human beings with X-linked granulomatous disease. PMID:23929678

  10. Influence of Populus genotype on gene expression by the wood decay fungus Phanerochaete chrysosporium.

    PubMed

    Gaskell, Jill; Marty, Amber; Mozuch, Michael; Kersten, Philip J; Splinter BonDurant, Sandra; Sabat, Grzegorz; Azarpira, Ali; Ralph, John; Skyba, Oleksandr; Mansfield, Shawn D; Blanchette, Robert A; Cullen, Dan

    2014-09-01

    We examined gene expression patterns in the lignin-degrading fungus Phanerochaete chrysosporium when it colonizes hybrid poplar (Populus alba × tremula) and syringyl (S)-rich transgenic derivatives. A combination of microarrays and liquid chromatography-tandem mass spectrometry (LC-MS/MS) allowed detection of a total of 9,959 transcripts and 793 proteins. Comparisons of P. chrysosporium transcript abundance in medium containing poplar or glucose as a sole carbon source showed 113 regulated genes, 11 of which were significantly higher (>2-fold, P < 0.05) in transgenic line 64 relative to the parental line. Possibly related to the very large amounts of syringyl (S) units in this transgenic tree (94 mol% S), several oxidoreductases were among the upregulated genes. Peptides corresponding to a total of 18 oxidoreductases were identified in medium consisting of biomass from line 64 or 82 (85 mol% S) but not in the parental clone (65 mol% S). These results demonstrate that P. chrysosporium gene expression patterns are substantially influenced by lignin composition.

  11. Draft Genome Sequence of Phomopsis longicolla Type Strain TWH P74, a Fungus Causing Phomopsis Seed Decay in Soybean

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Phomopsis longicolla T.W. Hobbs is the primary cause of Phomopsis seed decay in soybean. We report the de novo assembled draft genome sequence of P. longicolla type strain TWH P74. The resulting draft genome was estimated to be approximately 64 Mb in size with an overall G+C content of 48.1%. The dr...

  12. Fungus Amongus

    ERIC Educational Resources Information Center

    Wakeley, Deidra

    2005-01-01

    This role-playing simulation is designed to help teach middle level students about the typical lifecycle of a fungus. In this interactive simulation, students assume the roles of fungi, spores, living and dead organisms, bacteria, and rain. As they move around a playing field collecting food and water chips, they discover how the organisms…

  13. Proteomic and Functional Analysis of the Cellulase System Expressed by Postia placenta during Brown Rot of Solid Wood▿†

    PubMed Central

    Ryu, Jae San; Shary, Semarjit; Houtman, Carl J.; Panisko, Ellen A.; Korripally, Premsagar; St. John, Franz J.; Crooks, Casey; Siika-aho, Matti; Magnuson, Jon K.; Hammel, Kenneth E.

    2011-01-01

    Brown rot basidiomycetes have an important ecological role in lignocellulose recycling and are notable for their rapid degradation of wood polymers via oxidative and hydrolytic mechanisms. However, most of these fungi apparently lack processive (exo-acting) cellulases, such as cellobiohydrolases, which are generally required for efficient cellulolysis. The recent sequencing of the Postia placenta genome now permits a proteomic approach to this longstanding conundrum. We grew P. placenta on solid aspen wood, extracted proteins from the biodegrading substrate, and analyzed tryptic digests by shotgun liquid chromatography-tandem mass spectrometry. Comparison of the data with the predicted P. placenta proteome revealed the presence of 34 likely glycoside hydrolases, but only four of these—two in glycoside hydrolase family 5, one in family 10, and one in family 12—have sequences that suggested possible activity on cellulose. We expressed these enzymes heterologously and determined that they all exhibited endoglucanase activity on phosphoric acid-swollen cellulose. They also slowly hydrolyzed filter paper, a more crystalline substrate, but the soluble/insoluble reducing sugar ratios they produced classify them as nonprocessive. Computer simulations indicated that these enzymes produced soluble/insoluble ratios on reduced phosphoric acid-swollen cellulose that were higher than expected for random hydrolysis, which suggests that they could possess limited exo activity, but they are at best 10-fold less processive than cellobiohydrolases. It appears likely that P. placenta employs a combination of oxidative mechanisms and endo-acting cellulases to degrade cellulose efficiently in the absence of a significant processive component. PMID:21948841

  14. Proteomic and Functional Analysis of the Cellulase System Expressed by Postia placenta during Brown Rot of Solid Wood

    SciTech Connect

    Ryu, Jae San; Shary, Semarjit; Houtman, Carl J.; Panisko, Ellen A.; Korripally, Premsagar; St John, Franz J.; Crooks, Casey; Siika-aho, Matti; Magnuson, Jon K.; Hammel, Ken

    2011-11-01

    Abstract Brown rot basidiomycetes have an important ecological role in lignocellulose recycling and are notable for their rapid degradation of wood polymers via oxidative and hydrolytic mechanisms. However, most of these fungi apparently lack processive (exo-acting) cellulases, such as cellobiohydrolases, which are generally required for efficient cellulolysis. The recent sequencing of the Postia placenta genome now permits a proteomic approach to this longstanding conundrum. We grew P. placenta on solid aspen wood, extracted proteins from the biodegrading substrate, and analyzed tryptic digests by shotgun liquid chromatography-tandem mass spectrometry. Comparison of the data with the predicted P. placenta proteome revealed the presence of 34 likely glycoside hydrolases, but only four of these-two in glycoside hydrolase family 5, one in family 10, and one in family 12-have sequences that suggested possible activity on cellulose. We expressed these enzymes heterologously and determined that they all exhibited endoglucanase activity on phosphoric acid-swollen cellulose. They also slowly hydrolyzed filter paper, a more crystalline substrate, but the soluble/insoluble reducing sugar ratios they produced classify them as nonprocessive. Computer simulations indicated that these enzymes produced soluble/insoluble ratios on reduced phosphoric acid-swollen cellulose that were higher than expected for random hydrolysis, which suggests that they could possess limited exo activity, but they are at best 10-fold less processive than cellobiohydrolases. It appears likely that P. placenta employs a combination of oxidative mechanisms and endo-acting cellulases to degrade cellulose efficiently in the absence of a significant processive component.

  15. High Incidence of Preharvest Colonization of Huanglongbing-Symptomatic Citrus sinensis Fruit by Lasiodiplodia theobromae (Diplodia natalensis) and Exacerbation of Postharvest Fruit Decay by That Fungus

    PubMed Central

    Zhao, Wei; Bai, Jinhe; McCollum, Greg

    2014-01-01

    Huanglongbing (HLB), presumably caused by the bacterium “Candidatus Liberibacter asiaticus,” is a devastating citrus disease associated with excessive preharvest fruit drop. Lasiodiplodia theobromae (diplodia) is the causal organism of citrus stem end rot (SER). The pathogen infects citrus fruit under the calyx abscission zone (AZ-C) and is associated with cell wall hydrolytic enzymes similar to plant enzymes involved in abscission. By means of DNA sequencing, diplodia was found in “Ca. Liberibacter asiaticus”-positive juice from HLB-symptomatic fruit (S) but not in “Ca. Liberibacter asiaticus”-negative juice. Therefore, the incidence of diplodia in fruit tissues, the impact on HLB-related postharvest decay, and the implications for HLB-related preharvest fruit drop were investigated in Hamlin and Valencia oranges. Quantitative PCR results (qPCR) revealed a significantly (P < 0.001) greater incidence of diplodia in the AZ-C of HLB-symptomatic (S; “Ca. Liberibacter asiaticus” threshold cycle [CT] of <30) than in the AZ-C of in asymptomatic (AS; “Ca. Liberibacter asiaticus” CT of ≥30) fruit. In agreement with the qPCR results, 2 weeks after exposure to ethylene, the incidences of SER in S fruit were 66.7% (Hamlin) and 58.7% (Valencia), whereas for AS fruit the decay rates were 6.7% (Hamlin) and 5.3% (Valencia). Diplodia colonization of S fruit AZ-C was observed by scanning electron microscopy and confirmed by PCR test and morphology of conidia in isolates from the AZ-C after surface sterilization. Diplodia CT values were negatively correlated with ethylene production (R = −0.838 for Hamlin; R = −0.858 for Valencia) in S fruit, and positively correlated with fruit detachment force (R = 0.855 for Hamlin; R = 0.850 for Valencia), suggesting that diplodia colonization in AZ-C may exacerbate HLB-associated preharvest fruit drop. PMID:25344245

  16. High incidence of preharvest colonization of huanglongbing-symptomatic citrus sinensis fruit by Lasiodiplodia theobromae (Diplodia natalensis) and exacerbation of postharvest fruit decay by that fungus.

    PubMed

    Zhao, Wei; Bai, Jinhe; McCollum, Greg; Baldwin, Elizabeth

    2015-01-01

    Huanglongbing (HLB), presumably caused by the bacterium "Candidatus Liberibacter asiaticus," is a devastating citrus disease associated with excessive preharvest fruit drop. Lasiodiplodia theobromae (diplodia) is the causal organism of citrus stem end rot (SER). The pathogen infects citrus fruit under the calyx abscission zone (AZ-C) and is associated with cell wall hydrolytic enzymes similar to plant enzymes involved in abscission. By means of DNA sequencing, diplodia was found in "Ca. Liberibacter asiaticus"-positive juice from HLB-symptomatic fruit (S) but not in "Ca. Liberibacter asiaticus"-negative juice. Therefore, the incidence of diplodia in fruit tissues, the impact on HLB-related postharvest decay, and the implications for HLB-related preharvest fruit drop were investigated in Hamlin and Valencia oranges. Quantitative PCR results (qPCR) revealed a significantly (P < 0.001) greater incidence of diplodia in the AZ-C of HLB-symptomatic (S; "Ca. Liberibacter asiaticus" threshold cycle [CT] of <30) than in the AZ-C of in asymptomatic (AS; "Ca. Liberibacter asiaticus" CT of ≥30) fruit. In agreement with the qPCR results, 2 weeks after exposure to ethylene, the incidences of SER in S fruit were 66.7% (Hamlin) and 58.7% (Valencia), whereas for AS fruit the decay rates were 6.7% (Hamlin) and 5.3% (Valencia). Diplodia colonization of S fruit AZ-C was observed by scanning electron microscopy and confirmed by PCR test and morphology of conidia in isolates from the AZ-C after surface sterilization. Diplodia CT values were negatively correlated with ethylene production (R = -0.838 for Hamlin; R = -0.858 for Valencia) in S fruit, and positively correlated with fruit detachment force (R = 0.855 for Hamlin; R = 0.850 for Valencia), suggesting that diplodia colonization in AZ-C may exacerbate HLB-associated preharvest fruit drop.

  17. High incidence of preharvest colonization of huanglongbing-symptomatic citrus sinensis fruit by Lasiodiplodia theobromae (Diplodia natalensis) and exacerbation of postharvest fruit decay by that fungus.

    PubMed

    Zhao, Wei; Bai, Jinhe; McCollum, Greg; Baldwin, Elizabeth

    2015-01-01

    Huanglongbing (HLB), presumably caused by the bacterium "Candidatus Liberibacter asiaticus," is a devastating citrus disease associated with excessive preharvest fruit drop. Lasiodiplodia theobromae (diplodia) is the causal organism of citrus stem end rot (SER). The pathogen infects citrus fruit under the calyx abscission zone (AZ-C) and is associated with cell wall hydrolytic enzymes similar to plant enzymes involved in abscission. By means of DNA sequencing, diplodia was found in "Ca. Liberibacter asiaticus"-positive juice from HLB-symptomatic fruit (S) but not in "Ca. Liberibacter asiaticus"-negative juice. Therefore, the incidence of diplodia in fruit tissues, the impact on HLB-related postharvest decay, and the implications for HLB-related preharvest fruit drop were investigated in Hamlin and Valencia oranges. Quantitative PCR results (qPCR) revealed a significantly (P < 0.001) greater incidence of diplodia in the AZ-C of HLB-symptomatic (S; "Ca. Liberibacter asiaticus" threshold cycle [CT] of <30) than in the AZ-C of in asymptomatic (AS; "Ca. Liberibacter asiaticus" CT of ≥30) fruit. In agreement with the qPCR results, 2 weeks after exposure to ethylene, the incidences of SER in S fruit were 66.7% (Hamlin) and 58.7% (Valencia), whereas for AS fruit the decay rates were 6.7% (Hamlin) and 5.3% (Valencia). Diplodia colonization of S fruit AZ-C was observed by scanning electron microscopy and confirmed by PCR test and morphology of conidia in isolates from the AZ-C after surface sterilization. Diplodia CT values were negatively correlated with ethylene production (R = -0.838 for Hamlin; R = -0.858 for Valencia) in S fruit, and positively correlated with fruit detachment force (R = 0.855 for Hamlin; R = 0.850 for Valencia), suggesting that diplodia colonization in AZ-C may exacerbate HLB-associated preharvest fruit drop. PMID:25344245

  18. Decay resistance of wood treated with boric acid and tall oil derivates.

    PubMed

    Temiz, Ali; Alfredsen, Gry; Eikenes, Morten; Terziev, Nasko

    2008-05-01

    In this study, the effect of two boric acid concentrations (1% and 2%) and four derivates of tall oil with varying chemical composition were tested separately and in combination. The tall oil derivates were chosen in a way that they consist of different amounts of free fatty, resin acids and neutral compounds. Decay tests using two brown rot fungi (Postia placenta and Coniophora puteana) were performed on both unleached and leached test samples. Boric acid showed a low weight loss in test samples when exposed to fungal decay before leaching, but no effect after leaching. The tall oil derivates gave better efficacy against decay fungi compared to control, but are not within the range of the efficacy needed for a wood preservative. Double impregnation with boric acid and tall oil derivates gave synergistic effects for several of the double treatments both in unleached and leached samples. In the unleached samples the double treatment gave a better efficacy against decay fungi than tall oil alone. In leached samples a better efficacy against brown rot fungi were achieved than in samples with boron alone and a nearly similar or better efficacy than for tall oil alone. Boric acid at 2% concentration combined with the tall oil derivate consisting of 90% free resin acids (TO-III) showed the best performance against the two decay fungi with a weight loss less than 3% after a modified pure culture test.

  19. Fungus-growing ants.

    PubMed

    Weber, N A

    1966-08-01

    Fungus-growing ants (Attini) are in reality unique fungus-culturing insects.There are several hundred species in some dozen genera, of which Acromyrmex and Atta are the conspicuous leaf-cutters. The center of their activities is the fungus garden, which is also the site of the queen and brood. The garden, in most species, is made from fresh green leaves or other vegetal material. The ants forage for this, forming distinct trails to the vegetation that is being harvested. The cut leaves or other substrate are brought into the nest and prepared for the fungus. Fresh leaves and flowers are cut into pieces a millimeter or two in diameter; the ants form them into a pulpy mass by pinching them with the mandibles and adding saliva. Anal droplets are deposited on the pieces, which are then forced into place in the garden. Planting of the fungus is accomplished by an ant's picking up tufts of the adjacent mycelium and dotting the surface of the new substrate with it. The combination of salivary and anal secretions, together with the constant care given by the ants, facilitates the growth of the ant fungus only, despite constant possibilities for contamination. When the ants are removed, alien fungi and other organisms flourish. A mature nest of Atta Sexdens may consist of 2000 chambers, some temporarily empty, some with refuse, and the remainder with fungus gardens. Thousands of kilograms of fresh leaves will have been used. A young laboratory colony of Atta cephalotes will use 1 kilogram of fresh leaves for one garden. The attines are the chief agents for introducing organic matter into the soil in tropical rain forests; this matter becomes the nucleus for a host of other organisms, including nematodes and arthropods, after it is discarded by the ants. One ant species cultures a yeast; all others grow a mycelium. In the higher species the mycelium forms clusters of inflated hyphae. Mycologists accept as valid two names for confirmed fruiting stages: Leucocoprinus ( or

  20. Evidence of Subterranean Termite Feeding Deterrent Produced by Brown Rot Fungus Fibroporia radiculosa (Peck) Parmasto 1968 (Polyporales, Fomitopsidaceae).

    PubMed

    Kamaluddin, Nadia Nuraniya; Nakagawa-Izumi, Akiko; Nishizawa, Shota; Fukunaga, Ayuko; Doi, Shuichi; Yoshimura, Tsuyoshi; Horisawa, Sakae

    2016-08-18

    We found that decayed wood stakes with no termite damage collected from a termite-infested field exhibited a deterrent effect against the termite Reticulitermes speratus, Kolbe, 1885. The effect was observed to be lost or reduced by drying. After identification, it was found that the decayed stakes were infected by brown rot fungus Fibroporia radiculosa (Peck) Parmasto, 1968. In a no-choice feeding test, wood blocks decayed by this fungus under laboratory condition deterred R. speratus feeding and n-hexane extract from the decayed stake and blocks induced termite mortality. These data provided an insight into the interaction between wood-rot fungi and wood-feeding termites.

  1. Evidence of Subterranean Termite Feeding Deterrent Produced by Brown Rot Fungus Fibroporia radiculosa (Peck) Parmasto 1968 (Polyporales, Fomitopsidaceae)

    PubMed Central

    Kamaluddin, Nadia Nuraniya; Nakagawa-Izumi, Akiko; Nishizawa, Shota; Fukunaga, Ayuko; Doi, Shuichi; Yoshimura, Tsuyoshi; Horisawa, Sakae

    2016-01-01

    We found that decayed wood stakes with no termite damage collected from a termite-infested field exhibited a deterrent effect against the termite Reticulitermes speratus, Kolbe, 1885. The effect was observed to be lost or reduced by drying. After identification, it was found that the decayed stakes were infected by brown rot fungus Fibroporia radiculosa (Peck) Parmasto, 1968. In a no-choice feeding test, wood blocks decayed by this fungus under laboratory condition deterred R. speratus feeding and n-hexane extract from the decayed stake and blocks induced termite mortality. These data provided an insight into the interaction between wood-rot fungi and wood-feeding termites. PMID:27548231

  2. Evidence of Subterranean Termite Feeding Deterrent Produced by Brown Rot Fungus Fibroporia radiculosa (Peck) Parmasto 1968 (Polyporales, Fomitopsidaceae).

    PubMed

    Kamaluddin, Nadia Nuraniya; Nakagawa-Izumi, Akiko; Nishizawa, Shota; Fukunaga, Ayuko; Doi, Shuichi; Yoshimura, Tsuyoshi; Horisawa, Sakae

    2016-01-01

    We found that decayed wood stakes with no termite damage collected from a termite-infested field exhibited a deterrent effect against the termite Reticulitermes speratus, Kolbe, 1885. The effect was observed to be lost or reduced by drying. After identification, it was found that the decayed stakes were infected by brown rot fungus Fibroporia radiculosa (Peck) Parmasto, 1968. In a no-choice feeding test, wood blocks decayed by this fungus under laboratory condition deterred R. speratus feeding and n-hexane extract from the decayed stake and blocks induced termite mortality. These data provided an insight into the interaction between wood-rot fungi and wood-feeding termites. PMID:27548231

  3. Tooth Decay

    MedlinePlus

    ... in your mouth made up mostly of germs. Tooth decay starts in the outer layer, called the enamel. Without a filling, the decay can get deep into the tooth and its nerves and cause a toothache or ...

  4. Radioactive decay.

    PubMed

    Groch, M W

    1998-01-01

    When a parent radionuclide decays to its daughter radionuclide by means of alpha, beta, or isomeric transition, the decay follows an exponential form, which is characterized by the decay constant lambda. The decay constant represents the probability per unit time that a single radioatom will decay. The decay equation can be used to provide a useful expression for radionuclide decay, the half-life, the time when 50% of the radioatoms present will have decayed. Radiotracer half-life has direct implications in nuclear imaging, radiation therapy, and radiation safety because radionuclide half-life affects the ability to evaluate tracer kinetics and create appropriate nuclear images and also affects organ, tumor, and whole-body radiation dose. The number of radioatoms present in a sample is equal to the activity, defined as the number of transitions per unit time, divided by the decay constant; the mass of radioatoms present in a sample can be calculated to determine the specific activity (activity per unit mass). The dynamic relationship between the number of parent and daughter atoms present over time may lead to radioactive equilibrium, which takes two forms--secular and transient--and has direct relevance to generator-produced radionuclides.

  5. A pulmonary fungus ball produced by Cladosporium cladosporioides.

    PubMed

    Kwon-Chung, K J; Schwartz, I S; Rybak, B J

    1975-10-01

    A case of pulmonary fungus ball produced by Cladosporium cladosporioides is reported. The fungus occupied a cavity in the upper lobe of right lung. Invasion of the cavitary wall or adjacent pulmonary tissue by the fungus was not observed.

  6. Aggregation and feeding behavior of the formosan subterranean termite (Isoptera: Rhinotermitidae) on wood decayed by three species of wood rot fungi

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Aggregation and feeding behavior of the Formosan subterranean termite, Coptotermes formosanus Shiraki, was evaluated on wood decayed by three species of fungus that use different enzymatic pathways to degrade lignocellulose, the brown rot fungus, Gloeophyllum trabeum and two white rot fungi, Phanero...

  7. Seal Out Tooth Decay

    MedlinePlus

    ... Topics > Tooth Decay (Caries) > Seal Out Tooth Decay Seal Out Tooth Decay Main Content What are dental ... back teeth decay so easily? Who should get seal​ants? Should sealants be put on baby teeth? ...

  8. Entomology: A Bee Farming a Fungus.

    PubMed

    Oldroyd, Benjamin P; Aanen, Duur K

    2015-11-16

    Farming is done not only by humans, but also by some ant, beetle and termite species. With the discovery of a stingless bee farming a fungus that provides benefits to its larvae, bees can be added to this list.

  9. Cytochemical localization of cellulases in decayed and nondecayed wood

    SciTech Connect

    Murmanis, L.; Highley, T.L.; Palmer, J.G.

    1987-01-01

    Sawdust from undecayed western hemlock wood and from wood previously decayed by the brown-rot fungus Poria placenta or by the white-rot fungus Ganoderma applanatum was incubated with commercial cellulase from Trichoderma viride. Samples were treated cytochemically to locate cellulase activity and examined by TEM. Results showed that cellulase degraded undecayed wood extensively, with the attack starting on the outer border of a cell wall and progressing inside. Wood decayed by P. placenta, with or without cellulase incubation, and treated by the cytochemical test showed uniform distribution of electron dense particles throughout the cell walls. In wood decayed by G. applanatum, cellulase degradation was similar to that in undecayed wood. From measurements of particle diameter it is suggested that electron dense particles are cellulase. It is concluded that brown-rot and white-rot fungi have different effects on the microstructure of wood. The brown-rot fungus appears to open the wood microstructure so that cellulase can diffuse throughout the degraded tracheid wall.

  10. Fungus-insect gall of Phlebopus portentosus.

    PubMed

    Zhang, Chun-Xia; He, Ming-Xia; Cao, Yang; Liu, Jing; Gao, Feng; Wang, Wen-Bing; Ji, Kai-Ping; Shao, Shi-Cheng; Wang, Yun

    2015-01-01

    Phlebopus portentosus is a popular edible wild mushroom found in the tropical Yunnan, China, and northern Thailand. In its natural habitats, a gall often has been found on some plant roots, around which fungal fruiting bodies are produced. The galls are different from common insect galls in that their cavity walls are not made from plant tissue but rather from the hyphae of P. portentosus. Therefore we have termed this phenomenon "fungus-insect gall". Thus far six root mealy bug species in the family Pseudococcidae that form fungus-insect galls with P. portentosus have been identified: Formicococcus polysperes, Geococcus satellitum, Planococcus minor, Pseudococcus cryptus, Paraputo banzigeri and Rastrococcus invadens. Fungus-insect galls were found on the roots of more than 21 plant species, including Delonix regia, Citrus maxima, Coffea arabica and Artocarpus heterophyllus. Greenhouse inoculation trials showed that fungus-insect galls were found on the roots of A. heterophyllus 1 mo after inoculation. The galls were subglobose to globose, fulvous when young and became dark brown at maturation. Each gall harbored one or more mealy bugs and had a chimney-like vent for ventilation and access to the gall. The cavity wall had three layers. Various shaped mealy bug wax deposits were found inside the wall. Fungal hyphae invaded the epidermis of plant roots and sometimes even the cortical cells during the late stage of gall development. The identity of the fungus inside the cavity was confirmed by molecular methods. PMID:25344264

  11. Fungus-insect gall of Phlebopus portentosus.

    PubMed

    Zhang, Chun-Xia; He, Ming-Xia; Cao, Yang; Liu, Jing; Gao, Feng; Wang, Wen-Bing; Ji, Kai-Ping; Shao, Shi-Cheng; Wang, Yun

    2015-01-01

    Phlebopus portentosus is a popular edible wild mushroom found in the tropical Yunnan, China, and northern Thailand. In its natural habitats, a gall often has been found on some plant roots, around which fungal fruiting bodies are produced. The galls are different from common insect galls in that their cavity walls are not made from plant tissue but rather from the hyphae of P. portentosus. Therefore we have termed this phenomenon "fungus-insect gall". Thus far six root mealy bug species in the family Pseudococcidae that form fungus-insect galls with P. portentosus have been identified: Formicococcus polysperes, Geococcus satellitum, Planococcus minor, Pseudococcus cryptus, Paraputo banzigeri and Rastrococcus invadens. Fungus-insect galls were found on the roots of more than 21 plant species, including Delonix regia, Citrus maxima, Coffea arabica and Artocarpus heterophyllus. Greenhouse inoculation trials showed that fungus-insect galls were found on the roots of A. heterophyllus 1 mo after inoculation. The galls were subglobose to globose, fulvous when young and became dark brown at maturation. Each gall harbored one or more mealy bugs and had a chimney-like vent for ventilation and access to the gall. The cavity wall had three layers. Various shaped mealy bug wax deposits were found inside the wall. Fungal hyphae invaded the epidermis of plant roots and sometimes even the cortical cells during the late stage of gall development. The identity of the fungus inside the cavity was confirmed by molecular methods.

  12. Genetic diversity in Tetrachaetum elegans, a mitosporic aquatic fungus.

    PubMed

    Laitung, Beryl; Chauvet, Eric; Feau, Nicolas; Fève, Katia; Chikhi, Lounès; Gardes, Monique

    2004-06-01

    Tetrachaetum elegans Ingold is a saprobic aquatic hyphomycete for which no sexual stage has yet been described. It occurs most commonly during the initial decay of tree leaves in temperate freshwater habitats and typically sporulates under water. Dispersal of the aquatic fungus takes place primarily in the water column and has a large passive component. Differences in substrate composition (e.g. quality of leaf litter) may also play a role in the distribution of different species or genotypes. The population genetic structure of T. elegans was studied using amplified fragment length polymorphism (AFLP) multilocus fingerprints. The populations were isolated from the leaf litter of three different tree genera, sampled in nine streams distributed throughout a mixed deciduous forest. Molecular markers were developed for 97 monosporic isolates using four selective primer pairs. A total of 247 fragments were scored, of which only 32 were polymorphic. Significant stream differentiation was detected for the isolates considered in this study. Analysis of molecular variance revealed that 20% of the genetic variation observed was the result of differences between streams. No correlation between genetic and geographical distances was found but a few multilocus genotypes were observed in different locations. Altogether these results suggest that environmental barriers play a role in the population structure of this aquatic fungus. No clear-cut effect of leaf litter composition on genetic variation could be demonstrated. Finally, tests of linkage disequilibrium between the 32 polymorphic AFLP loci as well as simulations did not provide a final answer regarding clonality in T. elegans. Indeed, it was possible to reject linkage equilibrium at different sampling levels and show that full linkage was unlikely.

  13. Open-Ended Experimentation with the Fungus Pilobolus.

    ERIC Educational Resources Information Center

    Coble, Charles R.; Bland, Charles E.

    This paper describes open-ended experimentation with the fungus Pilobolus for laboratory work by high school students. The fungus structure and reproduction is described and sources of the fungus are suggested. Four areas for investigation are suggested: the effect of a diffuse light source, the effect of a point light source, the effect of light…

  14. White-nose syndrome fungus (Geomyces destructans) in bat, France.

    PubMed

    Puechmaille, Sebastien J; Verdeyroux, Pascal; Fuller, Hubert; Gouilh, Meriadeg Ar; Bekaert, Michael; Teeling, Emma C

    2010-02-01

    White-nose syndrome is caused by the fungus Geomyces destructans and is responsible for the deaths of >1,000,000 bats since 2006. This disease and fungus had been restricted to the northeastern United States. We detected this fungus in a bat in France and assessed the implications of this finding. PMID:20113562

  15. Evidence for the decay

    NASA Astrophysics Data System (ADS)

    Aaij, R.; Adeva, B.; Adinolfi, M.; Affolder, A.; Ajaltouni, Z.; Albrecht, J.; Alessio, F.; Alexander, M.; Ali, S.; Alkhazov, G.; Cartelle, P. Alvarez; Alves, A. A.; Amato, S.; Amerio, S.; Amhis, Y.; An, L.; Anderlini, L.; Anderson, J.; Andreassen, R.; Andreotti, M.; Andrews, J. E.; Appleby, R. B.; Gutierrez, O. Aquines; Archilli, F.; Artamonov, A.; Artuso, M.; Aslanides, E.; Auriemma, G.; Baalouch, M.; Bachmann, S.; Back, J. J.; Badalov, A.; Balagura, V.; Baldini, W.; Barlow, R. J.; Barschel, C.; Barsuk, S.; Barter, W.; Batozskaya, V.; Bauer, Th.; Bay, A.; Beddow, J.; Bedeschi, F.; Bediaga, I.; Belogurov, S.; Belous, K.; Belyaev, I.; Ben-Haim, E.; Bencivenni, G.; Benson, S.; Benton, J.; Berezhnoy, A.; Bernet, R.; Bettler, M.-O.; van Beuzekom, M.; Bien, A.; Bifani, S.; Bird, T.; Bizzeti, A.; Bjørnstad, P. M.; Blake, T.; Blanc, F.; Blouw, J.; Blusk, S.; Bocci, V.; Bondar, A.; Bondar, N.; Bonivento, W.; Borghi, S.; Borgia, A.; Borsato, M.; Bowcock, T. J. V.; Bowen, E.; Bozzi, C.; Brambach, T.; van den Brand, J.; Bressieux, J.; Brett, D.; Britsch, M.; Britton, T.; Brook, N. H.; Brown, H.; Bursche, A.; Busetto, G.; Buytaert, J.; Cadeddu, S.; Calabrese, R.; Callot, O.; Calvi, M.; Gomez, M. Calvo; Camboni, A.; Campana, P.; Perez, D. Campora; Caponio, F.; Carbone, A.; Carboni, G.; Cardinale, R.; Cardini, A.; Carranza-Mejia, H.; Carson, L.; Akiba, K. Carvalho; Casse, G.; Cassina, L.; Garcia, L. Castillo; Cattaneo, M.; Cauet, Ch.; Cenci, R.; Charles, M.; Charpentier, Ph.; Cheung, S.-F.; Chiapolini, N.; Chrzaszcz, M.; Ciba, K.; Vidal, X. Cid; Ciezarek, G.; Clarke, P. E. L.; Clemencic, M.; Cliff, H. V.; Closier, J.; Coca, C.; Coco, V.; Cogan, J.; Cogneras, E.; Collins, P.; Comerma-Montells, A.; Contu, A.; Cook, A.; Coombes, M.; Coquereau, S.; Corti, G.; Counts, I.; Couturier, B.; Cowan, G. A.; Craik, D. C.; Torres, M. Cruz; Cunliffe, S.; Currie, R.; D'Ambrosio, C.; Dalseno, J.; David, P.; David, P. N. Y.; Davis, A.; De Bruyn, K.; De Capua, S.; De Cian, M.; De Miranda, J. M.; De Paula, L.; De Silva, W.; De Simone, P.; Decamp, D.; Deckenhoff, M.; Del Buono, L.; Déléage, N.; Derkach, D.; Deschamps, O.; Dettori, F.; Di Canto, A.; Dijkstra, H.; Donleavy, S.; Dordei, F.; Dorigo, M.; Suárez, A. Dosil; Dossett, D.; Dovbnya, A.; Dupertuis, F.; Durante, P.; Dzhelyadin, R.; Dziurda, A.; Dzyuba, A.; Easo, S.; Egede, U.; Egorychev, V.; Eidelman, S.; Eisenhardt, S.; Eitschberger, U.; Ekelhof, R.; Eklund, L.; El Rifai, I.; Elsasser, Ch.; Esen, S.; Falabella, A.; Färber, C.; Farinelli, C.; Farley, N.; Farry, S.; Ferguson, D.; Albor, V. Fernandez; Rodrigues, F. Ferreira; Ferro-Luzzi, M.; Filippov, S.; Fiore, M.; Fiorini, M.; Firlej, M.; Fitzpatrick, C.; Fiutowski, T.; Fontana, M.; Fontanelli, F.; Forty, R.; Francisco, O.; Frank, M.; Frei, C.; Frosini, M.; Fu, J.; Furfaro, E.; Torreira, A. Gallas; Galli, D.; Gallorini, S.; Gambetta, S.; Gandelman, M.; Gandini, P.; Gao, Y.; Garofoli, J.; Tico, J. Garra; Garrido, L.; Gaspar, C.; Gauld, R.; Gavardi, L.; Gersabeck, E.; Gersabeck, M.; Gershon, T.; Ghez, Ph.; Gianelle, A.; Giani', S.; Gibson, V.; Giubega, L.; Gligorov, V. V.; Göbel, C.; Golubkov, D.; Golutvin, A.; Gomes, A.; Gordon, H.; Gotti, C.; Gándara, M. Grabalosa; Diaz, R. Graciani; Cardoso, L. A. Granado; Graugés, E.; Graziani, G.; Grecu, A.; Greening, E.; Gregson, S.; Griffith, P.; Grillo, L.; Grünberg, O.; Gui, B.; Gushchin, E.; Guz, Yu.; Gys, T.; Hadjivasiliou, C.; Haefeli, G.; Haen, C.; Hafkenscheid, T. W.; Haines, S. C.; Hall, S.; Hamilton, B.; Hampson, T.; Han, X.; Hansmann-Menzemer, S.; Harnew, N.; Harnew, S. T.; Harrison, J.; Hartmann, T.; He, J.; Head, T.; Heijne, V.; Hennessy, K.; Henrard, P.; Henry, L.; Morata, J. A. Hernando; van Herwijnen, E.; Heß, M.; Hicheur, A.; Hill, D.; Hoballah, M.; Hombach, C.; Hulsbergen, W.; Hunt, P.; Hussain, N.; Hutchcroft, D.; Hynds, D.; Idzik, M.; Ilten, P.; Jacobsson, R.; Jaeger, A.; Jans, E.; Jaton, P.; Jawahery, A.; Jezabek, M.; Jing, F.; John, M.; Johnson, D.; Jones, C. R.; Joram, C.; Jost, B.; Jurik, N.; Kaballo, M.; Kandybei, S.; Kanso, W.; Karacson, M.; Karbach, T. M.; Kelsey, M.; Kenyon, I. R.; Ketel, T.; Khanji, B.; Khurewathanakul, C.; Klaver, S.; Kochebina, O.; Kolpin, M.; Komarov, I.; Koopman, R. F.; Koppenburg, P.; Korolev, M.; Kozlinskiy, A.; Kravchuk, L.; Kreplin, K.; Kreps, M.; Krocker, G.; Krokovny, P.; Kruse, F.; Kucharczyk, M.; Kudryavtsev, V.; Kurek, K.; Kvaratskheliya, T.; La Thi, V. N.; Lacarrere, D.; Lafferty, G.; Lai, A.; Lambert, D.; Lambert, R. W.; Lanciotti, E.; Lanfranchi, G.; Langenbruch, C.; Langhans, B.; Latham, T.; Lazzeroni, C.; Le Gac, R.; van Leerdam, J.; Lees, J.-P.; Lefèvre, R.; Leflat, A.; Lefrançois, J.; Leo, S.; Leroy, O.; Lesiak, T.; Leverington, B.; Li, Y.; Liles, M.; Lindner, R.; Linn, C.; Lionetto, F.; Liu, B.; Liu, G.; Lohn, S.; Longstaff, I.; Lopes, J. H.; Lopez-March, N.; Lowdon, P.; Lu, H.; Lucchesi, D.; Luo, H.; Luppi, E.; Lupton, O.; Machefert, F.; Machikhiliyan, I. V.; Maciuc, F.; Maev, O.; Malde, S.; Manca, G.; Mancinelli, G.; Manzali, M.; Maratas, J.; Marchand, J. F.; Marconi, U.; Benito, C. Marin; Marino, P.; Märki, R.; Marks, J.; Martellotti, G.; Martens, A.; Sánchez, A. Martín; Martinelli, M.; Santos, D. Martinez; Vidal, F. Martinez; Tostes, D. Martins; Massafferri, A.; Matev, R.; Mathe, Z.; Matteuzzi, C.; Mazurov, A.; McCann, M.; McCarthy, J.; McNab, A.; McNulty, R.; McSkelly, B.; Meadows, B.; Meier, F.; Meissner, M.; Merk, M.; Milanes, D. A.; Minard, M.-N.; Rodriguez, J. Molina; Monteil, S.; Moran, D.; Morandin, M.; Morawski, P.; Mordà, A.; Morello, M. J.; Moron, J.; Mountain, R.; Muheim, F.; Müller, K.; Muresan, R.; Muster, B.; Naik, P.; Nakada, T.; Nandakumar, R.; Nasteva, I.; Needham, M.; Neri, N.; Neubert, S.; Neufeld, N.; Neuner, M.; Nguyen, A. D.; Nguyen, T. D.; Nguyen-Mau, C.; Nicol, M.; Niess, V.; Niet, R.; Nikitin, N.; Nikodem, T.; Novoselov, A.; Oblakowska-Mucha, A.; Obraztsov, V.; Oggero, S.; Ogilvy, S.; Okhrimenko, O.; Oldeman, R.; Onderwater, G.; Orlandea, M.; Goicochea, J. M. Otalora; Owen, P.; Oyanguren, A.; Pal, B. K.; Palano, A.; Palombo, F.; Palutan, M.; Panman, J.; Papanestis, A.; Pappagallo, M.; Pappalardo, L.; Parkes, C.; Parkinson, C. J.; Passaleva, G.; Patel, G. D.; Patel, M.; Patrignani, C.; Alvarez, A. Pazos; Pearce, A.; Pellegrino, A.; Altarelli, M. Pepe; Perazzini, S.; Trigo, E. Perez; Perret, P.; Perrin-Terrin, M.; Pescatore, L.; Pesen, E.; Petridis, K.; Petrolini, A.; Olloqui, E. Picatoste; Pietrzyk, B.; Pilař, T.; Pinci, D.; Pistone, A.; Playfer, S.; Casasus, M. Plo; Polci, F.; Poluektov, A.; Polycarpo, E.; Popov, A.; Popov, D.; Popovici, B.; Potterat, C.; Powell, A.; Prisciandaro, J.; Pritchard, A.; Prouve, C.; Pugatch, V.; Navarro, A. Puig; Punzi, G.; Qian, W.; Rachwal, B.; Rademacker, J. H.; Rakotomiaramanana, B.; Rama, M.; Rangel, M. S.; Raniuk, I.; Rauschmayr, N.; Raven, G.; Reichert, S.; Reid, M. M.; dos Reis, A. C.; Ricciardi, S.; Richards, A.; Rinnert, K.; Molina, V. Rives; Romero, D. A. Roa; Robbe, P.; Roberts, D. A.; Rodrigues, A. B.; Rodrigues, E.; Perez, P. Rodriguez; Roiser, S.; Romanovsky, V.; Vidal, A. Romero; Rotondo, M.; Rouvinet, J.; Ruf, T.; Ruffini, F.; Ruiz, H.; Valls, P. Ruiz; Sabatino, G.; Silva, J. J. Saborido; Sagidova, N.; Sail, P.; Saitta, B.; Guimaraes, V. Salustino; Sedes, B. Sanmartin; Santacesaria, R.; Rios, C. Santamarina; Santovetti, E.; Sapunov, M.; Sarti, A.; Satriano, C.; Satta, A.; Savrie, M.; Savrina, D.; Schiller, M.; Schindler, H.; Schlupp, M.; Schmelling, M.; Schmidt, B.; Schneider, O.; Schopper, A.; Schune, M.-H.; Schwemmer, R.; Sciascia, B.; Sciubba, A.; Seco, M.; Semennikov, A.; Senderowska, K.; Sepp, I.; Serra, N.; Serrano, J.; Seyfert, P.; Shapkin, M.; Shapoval, I.; Shcheglov, Y.; Shears, T.; Shekhtman, L.; Shevchenko, O.; Shevchenko, V.; Shires, A.; Sidorov, F.; Coutinho, R. Silva; Simi, G.; Sirendi, M.; Skidmore, N.; Skwarnicki, T.; Smith, N. A.; Smith, E.; Smith, E.; Smith, J.; Smith, M.; Snoek, H.; Sokoloff, M. D.; Soler, F. J. P.; Soomro, F.; Souza, D.; De Paula, B. Souza; Spaan, B.; Sparkes, A.; Spinella, F.; Spradlin, P.; Stagni, F.; Stahl, S.; Steinkamp, O.; Stevenson, S.; Stoica, S.; Stone, S.; Storaci, B.; Stracka, S.; Straticiuc, M.; Straumann, U.; Stroili, R.; Subbiah, V. K.; Sun, L.; Sutcliffe, W.; Swientek, K.; Swientek, S.; Syropoulos, V.; Szczekowski, M.; Szczypka, P.; Szilard, D.; Szumlak, T.; T'Jampens, S.; Teklishyn, M.; Tellarini, G.; Teubert, F.; Thomas, C.; Thomas, E.; van Tilburg, J.; Tisserand, V.; Tobin, M.; Tolk, S.; Tomassetti, L.; Tonelli, D.; Topp-Joergensen, S.; Torr, N.; Tournefier, E.; Tourneur, S.; Tran, M. T.; Tresch, M.; Tsaregorodtsev, A.; Tsopelas, P.; Tuning, N.; Garcia, M. Ubeda; Ukleja, A.; Ustyuzhanin, A.; Uwer, U.; Vagnoni, V.; Valenti, G.; Vallier, A.; Gomez, R. Vazquez; Regueiro, P. Vazquez; Sierra, C. Vázquez; Vecchi, S.; Velthuis, J. J.; Veltri, M.; Veneziano, G.; Vesterinen, M.; Viaud, B.; Vieira, D.; Vilasis-Cardona, X.; Vollhardt, A.; Volyanskyy, D.; Voong, D.; Vorobyev, A.; Vorobyev, V.; Voß, C.; Voss, H.; de Vries, J. A.; Waldi, R.; Wallace, C.; Wallace, R.; Wandernoth, S.; Wang, J.; Ward, D. R.; Watson, N. K.; Websdale, D.; Whitehead, M.; Wicht, J.; Wiedner, D.; Wilkinson, G.; Williams, M. P.; Williams, M.; Wilson, F. F.; Wimberley, J.; Wishahi, J.; Wislicki, W.; Witek, M.; Wormser, G.; Wotton, S. A.; Wright, S.; Wu, S.; Wyllie, K.; Xie, Y.; Xing, Z.; Yang, Z.; Yuan, X.; Yushchenko, O.; Zangoli, M.; Zavertyaev, M.; Zhang, F.; Zhang, L.; Zhang, W. C.; Zhang, Y.; Zhelezov, A.; Zhokhov, A.; Zhong, L.; Zvyagin, A.

    2014-05-01

    Evidence is presented for the decay using proton-proton collision data, corresponding to an integrated luminosity of 3 fb-1, collected with the LHCb detector. A signal yield of 32 ± 8 decays is found with a significance of 4.5 standard deviations. The ratio of the branching fraction of the decay to that of the decay is measured to be where the first uncertainty is statistical and the second is systematic. [Figure not available: see fulltext.

  16. Ant-fungus species combinations engineer physiological activity of fungus gardens.

    PubMed

    Seal, J N; Schiøtt, M; Mueller, U G

    2014-07-15

    Fungus-gardening insects are among the most complex organisms because of their extensive co-evolutionary histories with obligate fungal symbionts and other microbes. Some fungus-gardening insect lineages share fungal symbionts with other members of their lineage and thus exhibit diffuse co-evolutionary relationships, while others exhibit little or no symbiont sharing, resulting in host-fungus fidelity. The mechanisms that maintain this symbiont fidelity are currently unknown. Prior work suggested that derived leaf-cutting ants in the genus Atta interact synergistically with leaf-cutter fungi (Attamyces) by exhibiting higher fungal growth rates and enzymatic activities than when growing a fungus from the sister-clade to Attamyces (so-called 'Trachymyces'), grown primarily by the non-leaf cutting Trachymyrmex ants that form, correspondingly, the sister-clade to leaf-cutting ants. To elucidate the enzymatic bases of host-fungus specialization in leaf-cutting ants, we conducted a reciprocal fungus-switch experiment between the ant Atta texana and the ant Trachymyrmex arizonensis and report measured enzymatic activities of switched and sham-switched fungus gardens to digest starch, pectin, xylan, cellulose and casein. Gardens exhibited higher amylase and pectinase activities when A. texana ants cultivated Attamyces compared with Trachymyces fungi, consistent with enzymatic specialization. In contrast, gardens showed comparable amylase and pectinase activities when T. arizonensis cultivated either fungal species. Although gardens of leaf-cutting ants are not known to be significant metabolizers of cellulose, T. arizonensis were able to maintain gardens with significant cellulase activity when growing either fungal species. In contrast to carbohydrate metabolism, protease activity was significantly higher in Attamyces than in Trachymyces, regardless of the ant host. Activity of some enzymes employed by this symbiosis therefore arises from complex interactions between the

  17. Identification of naphthalene metabolism by white rot fungus Pleurotus eryngii.

    PubMed

    Hadibarata, Tony; Teh, Zee Chuang; Rubiyatno; Zubir, Meor Mohd Fikri Ahmad; Khudhair, Ameer Badr; Yusoff, Abdull Rahim Mohd; Salim, Mohd Razman; Hidayat, Topik

    2013-10-01

    The use of biomaterials or microorganisms in PAHs degradation had presented an eye-catching performance. Pleurotus eryngii is a white rot fungus, which is easily isolated from the decayed woods in the tropical rain forest, used to determine the capability to utilize naphthalene, a two-ring polycyclic aromatic hydrocarbon as source of carbon and energy. In the meantime, biotransformation of naphthalene to intermediates and other by-products during degradation was investigated in this study. Pleurotus eryngii had been incubated in liquid medium formulated with naphthalene for 14 days. The presence of metabolites of naphthalene suggests that Pleurotus eryngii begin the ring cleavage by dioxygenation on C1 and C4 position to give 1,4-naphthaquinone. 1,4-Naphthaquinone was further degraded to benzoic acid, where the proposed terepthalic acid is absent in the cultured extract. Further degradation of benzoic acid by Pleurotus eryngii shows the existence of catechol as a result of the combination of decarboxylation and hydroxylation process. Unfortunately, phthalic acid was not detected in this study. Several enzymes, including manganese peroxidase, lignin peroxidase, laccase, 1,2-dioxygenase and 2,3-dioxygenase are enzymes responsible for naphthalene degradation. Reduction of naphthalene and the presence of metabolites in liquid medium showed the ability of Pleurotus eryngii to utilize naphthalene as carbon source instead of a limited glucose amount. PMID:23334282

  18. Identification of naphthalene metabolism by white rot fungus Pleurotus eryngii.

    PubMed

    Hadibarata, Tony; Teh, Zee Chuang; Rubiyatno; Zubir, Meor Mohd Fikri Ahmad; Khudhair, Ameer Badr; Yusoff, Abdull Rahim Mohd; Salim, Mohd Razman; Hidayat, Topik

    2013-10-01

    The use of biomaterials or microorganisms in PAHs degradation had presented an eye-catching performance. Pleurotus eryngii is a white rot fungus, which is easily isolated from the decayed woods in the tropical rain forest, used to determine the capability to utilize naphthalene, a two-ring polycyclic aromatic hydrocarbon as source of carbon and energy. In the meantime, biotransformation of naphthalene to intermediates and other by-products during degradation was investigated in this study. Pleurotus eryngii had been incubated in liquid medium formulated with naphthalene for 14 days. The presence of metabolites of naphthalene suggests that Pleurotus eryngii begin the ring cleavage by dioxygenation on C1 and C4 position to give 1,4-naphthaquinone. 1,4-Naphthaquinone was further degraded to benzoic acid, where the proposed terepthalic acid is absent in the cultured extract. Further degradation of benzoic acid by Pleurotus eryngii shows the existence of catechol as a result of the combination of decarboxylation and hydroxylation process. Unfortunately, phthalic acid was not detected in this study. Several enzymes, including manganese peroxidase, lignin peroxidase, laccase, 1,2-dioxygenase and 2,3-dioxygenase are enzymes responsible for naphthalene degradation. Reduction of naphthalene and the presence of metabolites in liquid medium showed the ability of Pleurotus eryngii to utilize naphthalene as carbon source instead of a limited glucose amount.

  19. [Report on a fungus parasitizing Entamoeba histolytica].

    PubMed

    Cao, C Q; Feng, Y S

    1989-01-01

    Infection of Entamoeba histolytica with chytridiaceous fungus Sphaerita was observed in some specimens obtained from a farmer and stained with iron-haematoxylin. The fungi were found in 78% of the cysts, mostly immature ones. Within the amoebae this parasite occurred singly, in groups, or in the form of a sporangium. It was located in the cytoplasm, the glycogen mass or the chromatoidal bars. In the same specimen, the parasitic fungus was also found in 18% of E. coli cysts; in 11% of E. nana cysts; while only one of 16 E. hartmanni cysts was parasitized. It is an interesting case of superimposed parasitism so far reported in China as well as a rare case of several species of amoebae being heavily involved with the same in the scientific literature. PMID:2548767

  20. New tricycloalternarenes from fungus Alternaria sp.

    PubMed

    Shi, Xiu; Wei, Wei; Zhang, Wen-Jing; Hua, Cheng-Pin; Chen, Chao-Jun; Ge, Hui-Ming; Tan, Ren-Xiang; Jiao, Rui-Hua

    2015-01-01

    Two new tricycloalternarenes I (1) and J (2), together with five known derivatives (3-7), were isolated from the culture of marine fungus Alternaria sp. The structures were elucidated by a combination of spectroscopic approach ((1)H, (13)C NMR, HMBC, COSY, and NOESY) and the low-temperature (100 K) single-crystal X-ray crystallography analysis. The antimicrobial assays of tricycloalternarenes I (1) and J (2) were tested.

  1. Comparison of effectiveness of wood decay fungi maintained by annual subculture on agar and stored in sterile water for 18 years.

    PubMed

    Richter, Dana L; Kangas, Laura C; Smith, Jill K; Laks, Peter E

    2010-03-01

    Fourteen isolates of basidiomycete decay fungi (12 species) were maintained for 18 years on agar slants transferred annually and also stored as mycelium-agar cores under cold sterile water without subculture. Isolates stored by each method were evaluated for decay effectiveness using a standard laboratory accelerated soil-block decay test. Effectiveness was measured by mean percent mass loss of wood blocks. There was no significant difference (p < or = 0.05) in decay effectiveness between storage methods for 12 of the fungus isolates tested. For the 2 fungi that showed a significant difference in the amount of decay with respect to storage method, 1 fungus (Fomitopsis lilacinogilva) produced more decay by the strain maintained as an agar slant, while the other fungus (Trametes versicolor) produced more decay by the strain stored in sterile water. Results suggested that storage under sterile water is an easy and effective method to store isolates of decay fungi for long periods, but as with any microbial storage method, careful monitoring of isolates upon revival is necessary.

  2. Rare Decays at LHCb

    NASA Astrophysics Data System (ADS)

    Hall, Sam

    2014-04-01

    Rare decays of beauty and charm hadrons provide an effective method of testing the Standard Model and probing possible new physics scenarios. The LHCb experiment has published a variety of interesting results in this field, some of which are presented here. In particular the measurements of the branching fractions of B(s)0 → μ+μ- which, in combination with CMS, resulted in the first observation of the Bs0 → μ+μ- decay. Other topics include searches for the rare decay D0 → μ+μ-, the lepton flavour violating decays B(s)0 → e±μ∓, and the observation of the ψ(4160) resonance in the region of low recoil in B+ → K+μ+μ- decay. New results on the angular analysis of the decay B0 → K*0μ+μ- with form factor independent observables are also shown.

  3. Effective Majorana neutrino decay

    NASA Astrophysics Data System (ADS)

    Duarte, Lucía; Romero, Ismael; Peressutti, Javier; Sampayo, Oscar A.

    2016-08-01

    We study the decay of heavy sterile Majorana neutrinos according to the interactions obtained from an effective general theory. We describe the two- and three-body decays for a wide range of neutrino masses. The results obtained and presented in this work could be useful for the study of the production and detection of these particles in a variety of high energy physics experiments and astrophysical observations. We show in different figures the dominant branching ratios and the total decay width.

  4. Symbiotic Fungi Produce Laccases Potentially Involved in Phenol Degradation in Fungus Combs of Fungus-Growing Termites in Thailand†

    PubMed Central

    Taprab, Yaovapa; Johjima, Toru; Maeda, Yoshimasa; Moriya, Shigeharu; Trakulnaleamsai, Savitr; Noparatnaraporn, Napavarn; Ohkuma, Moriya; Kudo, Toshiaki

    2005-01-01

    Fungus-growing termites efficiently decompose plant litter through their symbiotic relationship with basidiomycete fungi of the genus Termitomyces. Here, we investigated phenol-oxidizing enzymes in symbiotic fungi and fungus combs (a substrate used to cultivate symbiotic fungi) from termites belonging to the genera Macrotermes, Odontotermes, and Microtermes in Thailand, because these enzymes are potentially involved in the degradation of phenolic compounds during fungus comb aging. Laccase activity was detected in all the fungus combs examined as well as in the culture supernatants of isolated symbiotic fungi. Conversely, no peroxidase activity was detected in any of the fungus combs or the symbiotic fungal cultures. The laccase cDNA fragments were amplified directly from RNA extracted from fungus combs of five termite species and a fungal isolate using degenerate primers targeting conserved copper binding domains of basidiomycete laccases, resulting in a total of 13 putative laccase cDNA sequences being identified. The full-length sequences of the laccase cDNA and the corresponding gene, lcc1-2, were identified from the fungus comb of Macrotermes gilvus and a Termitomyces strain isolated from the same fungus comb, respectively. Partial purification of laccase from the fungus comb showed that the lcc1-2 gene product was a dominant laccase in the fungus comb. These findings indicate that the symbiotic fungus secretes laccase to the fungus comb. In addition to laccase, we report novel genes that showed a significant similarity with fungal laccases, but the gene product lacked laccase activity. Interestingly, these genes were highly expressed in symbiotic fungi of all the termite hosts examined. PMID:16332742

  5. Tuning fork decay.

    PubMed

    Miller, G W

    1979-03-01

    Tuning fork tests are used routinely by many otologists. A different group of otologists find the tests inconsistent and unreliable. This controversy has probably developed because the audiometer has replaced the tuning fork in hearing measurement. As a result, the art of use of the tuning fork is poorly learned. This study examines decay, one of the physical parameters of tuning forks. Measurements of acoustic (sound wave) and vibration (stem movement) decay were made. Alteration in decay due to pressure changes on the fork stem were studied. Acoustic signals were generated in an anechoic chamber. Vibration measurements were obtained using an artificial mastoid. Analysis of the signals was accomplished by a system of amplifiers, filters, tape recorders, and a graphic recorder. Tuning fork sound decay is a property of the instrument which occurs every time the fork is struck. The decay is a constant in decibels per second. The acoustic mode and the vibration mode decay at similar rates for the same fork. The strike frequency (a higher frequency than the fundamental produced when the fork is struck) also has a constant decay rate in decibels per second, and it is reported here for the first time. Force of 800 gm. and less applied to the bottom of the stem in vibration measurement caused minimal decay constant changes. When the physical parameters of the tuning fork (including this information on damping) are fully studied, tuning fork testing should become more of a science and less of an art.

  6. Radioactive Decay - An Analog.

    ERIC Educational Resources Information Center

    McGeachy, Frank

    1988-01-01

    Presents an analog of radioactive decay that allows the student to grasp the concept of half life and the exponential nature of the decay process. The analog is devised to use small, colored, plastic poker chips or counters. Provides the typical data and a graph which supports the analog. (YP)

  7. Expanding Distribution of Lethal Amphibian Fungus Batrachochytrium salamandrivorans in Europe.

    PubMed

    Spitzen-van der Sluijs, Annemarieke; Martel, An; Asselberghs, Johan; Bales, Emma K; Beukema, Wouter; Bletz, Molly C; Dalbeck, Lutz; Goverse, Edo; Kerres, Alexander; Kinet, Thierry; Kirst, Kai; Laudelout, Arnaud; Marin da Fonte, Luis F; Nöllert, Andreas; Ohlhoff, Dagmar; Sabino-Pinto, Joana; Schmidt, Benedikt R; Speybroeck, Jeroen; Spikmans, Frank; Steinfartz, Sebastian; Veith, Michael; Vences, Miguel; Wagner, Norman; Pasmans, Frank; Lötters, Stefan

    2016-07-01

    Emerging fungal diseases can drive amphibian species to local extinction. During 2010-2016, we examined 1,921 urodeles in 3 European countries. Presence of the chytrid fungus Batrachochytrium salamandrivorans at new locations and in urodeles of different species expands the known geographic and host range of the fungus and underpins its imminent threat to biodiversity.

  8. Phomalactone from a phytopathogenic fungus infecting Zinnia elegans (Asteraceae) leaves

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Zinnia elegans plants are infected by a fungus that causes necrosis with dark red spots particularly in late spring to the middle of summer in the Mid-South part of the United States. This fungal disease when untreated causes the leaves to wilt and eventually kills the plant. The fungus was isolated...

  9. Genome Sequence of the Pathogenic Fungus Sporothrix schenckii (ATCC 58251).

    PubMed

    Cuomo, Christina A; Rodriguez-Del Valle, Nuri; Perez-Sanchez, Lizaida; Abouelleil, Amr; Goldberg, Jonathan; Young, Sarah; Zeng, Qiandong; Birren, Bruce W

    2014-05-22

    Sporothrix schenckii is a pathogenic dimorphic fungus that grows as a yeast and as mycelia. This species is the causative agent of sporotrichosis, typically a skin infection. We report the genome sequence of S. schenckii, which will facilitate the study of this fungus and of the Sporothrix schenckii group.

  10. Expanding Distribution of Lethal Amphibian Fungus Batrachochytrium salamandrivorans in Europe

    PubMed Central

    Spitzen-van der Sluijs, Annemarieke; Martel, An; Asselberghs, Johan; Bales, Emma K.; Beukema, Wouter; Bletz, Molly C.; Dalbeck, Lutz; Goverse, Edo; Kerres, Alexander; Kinet, Thierry; Kirst, Kai; Laudelout, Arnaud; Marin da Fonte, Luis F.; Nöllert, Andreas; Ohlhoff, Dagmar; Sabino-Pinto, Joana; Schmidt, Benedikt R.; Speybroeck, Jeroen; Spikmans, Frank; Steinfartz, Sebastian; Veith, Michael; Vences, Miguel; Wagner, Norman; Pasmans, Frank

    2016-01-01

    Emerging fungal diseases can drive amphibian species to local extinction. During 2010–2016, we examined 1,921 urodeles in 3 European countries. Presence of the chytrid fungus Batrachochytrium salamandrivorans at new locations and in urodeles of different species expands the known geographic and host range of the fungus and underpins its imminent threat to biodiversity. PMID:27070102

  11. Expanding Distribution of Lethal Amphibian Fungus Batrachochytrium salamandrivorans in Europe.

    PubMed

    Spitzen-van der Sluijs, Annemarieke; Martel, An; Asselberghs, Johan; Bales, Emma K; Beukema, Wouter; Bletz, Molly C; Dalbeck, Lutz; Goverse, Edo; Kerres, Alexander; Kinet, Thierry; Kirst, Kai; Laudelout, Arnaud; Marin da Fonte, Luis F; Nöllert, Andreas; Ohlhoff, Dagmar; Sabino-Pinto, Joana; Schmidt, Benedikt R; Speybroeck, Jeroen; Spikmans, Frank; Steinfartz, Sebastian; Veith, Michael; Vences, Miguel; Wagner, Norman; Pasmans, Frank; Lötters, Stefan

    2016-07-01

    Emerging fungal diseases can drive amphibian species to local extinction. During 2010-2016, we examined 1,921 urodeles in 3 European countries. Presence of the chytrid fungus Batrachochytrium salamandrivorans at new locations and in urodeles of different species expands the known geographic and host range of the fungus and underpins its imminent threat to biodiversity. PMID:27070102

  12. Hypernuclear Weak Decays

    NASA Astrophysics Data System (ADS)

    Itonaga, K.; Motoba, T.

    The recent theoretical studies of Lambda-hypernuclear weak decaysof the nonmesonic and pi-mesonic ones are developed with the aim to disclose the link between the experimental decay observables and the underlying basic weak decay interactions and the weak decay mechanisms. The expressions of the nonmesonic decay rates Gamma_{nm} and the decay asymmetry parameter alpha_1 of protons from the polarized hypernuclei are presented in the shell model framework. We then introduce the meson theoretical Lambda N -> NN interactions which include the one-meson exchanges, the correlated-2pi exchanges, and the chiral-pair-meson exchanges. The features of meson exchange potentials and their roles on the nonmesonic decays are discussed. With the adoption of the pi + 2pi/rho + 2pi/sigma + omega + K + rhopi/a_1 + sigmapi/a_1 exchange potentials, we have carried out the systematic calculations of the nonmesonic decay observables for light-to-heavy hypernuclei. The present model can account for the available experimental data of the decay rates, Gamma_n/Gamma_p ratios, and the intrinsic asymmetry parameters alpha_Lambda (alpha_Lambda is related to alpha_1) of emitted protons well and consistently within the error bars. The hypernuclear lifetimes are evaluated by converting the total weak decay rates Gamma_{tot} = Gamma_pi + Gamma_{nm} to tau, which exhibit saturation property for the hypernuclear mass A ≥ 30 and agree grossly well with experimental data for the mass range from light to heavy hypernuclei except for the very light ones. Future extensions of the model and the remaining problems are also mentioned. The pi-mesonic weak processes are briefly surveyed, and the calculations and predictions are compared and confirmed by the recent high precision FINUDA pi-mesonic decay data. This shows that the theoretical basis seems to be firmly grounded.

  13. Assembly of complex plant–fungus networks

    PubMed Central

    Toju, Hirokazu; Guimarães, Paulo R.; Olesen, Jens M.; Thompson, John N.

    2014-01-01

    Species in ecological communities build complex webs of interaction. Although revealing the architecture of these networks is fundamental to understanding ecological and evolutionary dynamics in nature, it has been difficult to characterize the structure of most species-rich ecological systems. By overcoming this limitation through next-generation sequencing technology, we herein uncover the network architecture of below-ground plant–fungus symbioses, which are ubiquitous to terrestrial ecosystems. The examined symbiotic network of a temperate forest in Japan includes 33 plant species and 387 functionally and phylogenetically diverse fungal taxa, and the overall network architecture differs fundamentally from that of other ecological networks. In contrast to results for other ecological networks and theoretical predictions for symbiotic networks, the plant–fungus network shows moderate or relatively low levels of interaction specialization and modularity and an unusual pattern of ‘nested’ network architecture. These results suggest that species-rich ecological networks are more architecturally diverse than previously recognized. PMID:25327887

  14. Bacterial farming by the fungus Morchella crassipes

    PubMed Central

    Pion, Martin; Spangenberg, Jorge E.; Simon, Anaele; Bindschedler, Saskia; Flury, Coralie; Chatelain, Auriel; Bshary, Redouan; Job, Daniel; Junier, Pilar

    2013-01-01

    The interactions between bacteria and fungi, the main actors of the soil microbiome, remain poorly studied. Here, we show that the saprotrophic and ectomycorrhizal soil fungus Morchella crassipes acts as a bacterial farmer of Pseudomonas putida, which serves as a model soil bacterium. Farming by M. crassipes consists of bacterial dispersal, bacterial rearing with fungal exudates, as well as harvesting and translocation of bacterial carbon. The different phases were confirmed experimentally using cell counting and 13C probing. Common criteria met by other non-human farming systems are also valid for M. crassipes farming, including habitual planting, cultivation and harvesting. Specific traits include delocalization of food production and consumption and separation of roles in the colony (source versus sink areas), which are also found in human agriculture. Our study evidences a hitherto unknown mutualistic association in which bacteria gain through dispersal and rearing, while the fungus gains through the harvesting of an additional carbon source and increased stress resistance of the mycelium. This type of interaction between fungi and bacteria may play a key role in soils. PMID:24174111

  15. Assessing fungus prevalence in domestic interiors.

    PubMed

    Solomon, W R

    1975-09-01

    Single-plate, Andersen sampler collections of mesonphilic imperfect fungi were made at three points in and immediately outside a series of midwestern homes. During frost-free periods, emanations of dark-spored form genera predominated at both points with indoor levels averaging 25% of those in outside air. At these times, volumetric recoveries and those by 30-min exposure of open culture plates have correlated tenuously (r = 0.29) in bedroom air of 20 homes. During winter, form species of Penicillium, Aspergillus, Oospora, Sporothrix, yeasts, etc. predominated indoors, with levels exceeding 1,000 particles/M3 noted in over 18% of homes; outdoor concentrations never exceeded 230 particles/M3. Comparisons of volumetric and open-plate recoveries from 50 homes during winter have revealed an almost random relationship (r = 0.06). These findings reflect the case with which outdoor spore clouds may penetrate structures and obscure evidence of internal fungus cources. The data also imply that, because of size-related undersampling, open plates often seriously misrepresent prevalence levels and occasionally can exclude abundant types from recovery. The fungus flora of enclosed spaces merits further critical study by volumetric techniques of calculable efficiency in a setting that minimizes contamination from without.

  16. Hazardous waste treatment using fungus enters marketplace

    SciTech Connect

    Illman, D.L.

    1993-07-01

    When the announcement was made eight years ago that a common fungus had been found that could degrade a variety of environmental pollutants, the news stirred interest in the scientific community, the private sector, and the general public. Here was the promise of a new technology that might be effective and economical in treating hazardous waste, especially the most recalcitrant of toxic pollutants. Today, commercialization is beginning amid a mixture of optimism and skepticism. The organism in question is white rot fungus, or Phanerochaete chrysosporium, and it belongs to a family of woodrotting fungi common all over North America. The fungi secrete enzymes that break down lignin in wood to carbon dioxide and water--a process called mineralization. These lignin-degrading enzymes are not very discriminating, however. The white rot fungi have been shown to degrade such materials as DDT, the herbicide (2,4,5-trichlorophenoxy)acetic acid (2,4,5-T), 2,4,6-trinitrotoluene (TNT), pentachlorophenol (PCP), creosote, coal tars, and heavy fuels, in many cases mineralizing these pollutants to a significant extent.

  17. Bacterial farming by the fungus Morchella crassipes.

    PubMed

    Pion, Martin; Spangenberg, Jorge E; Simon, Anaele; Bindschedler, Saskia; Flury, Coralie; Chatelain, Auriel; Bshary, Redouan; Job, Daniel; Junier, Pilar

    2013-12-22

    The interactions between bacteria and fungi, the main actors of the soil microbiome, remain poorly studied. Here, we show that the saprotrophic and ectomycorrhizal soil fungus Morchella crassipes acts as a bacterial farmer of Pseudomonas putida, which serves as a model soil bacterium. Farming by M. crassipes consists of bacterial dispersal, bacterial rearing with fungal exudates, as well as harvesting and translocation of bacterial carbon. The different phases were confirmed experimentally using cell counting and (13)C probing. Common criteria met by other non-human farming systems are also valid for M. crassipes farming, including habitual planting, cultivation and harvesting. Specific traits include delocalization of food production and consumption and separation of roles in the colony (source versus sink areas), which are also found in human agriculture. Our study evidences a hitherto unknown mutualistic association in which bacteria gain through dispersal and rearing, while the fungus gains through the harvesting of an additional carbon source and increased stress resistance of the mycelium. This type of interaction between fungi and bacteria may play a key role in soils. PMID:24174111

  18. General metabolism of the dimorphic and pathogenic fungus Paracoccidioides brasiliensis.

    PubMed

    Arraes, Fabrício B M; Benoliel, Bruno; Burtet, Rafael T; Costa, Patrícia L N; Galdino, Alexandro S; Lima, Luanne H A; Marinho-Silva, Camila; Oliveira-Pereira, Luciana; Pfrimer, Pollyanna; Procópio-Silva, Luciano; Reis, Viviane Castelo-Branco; Felipe, Maria Sueli S

    2005-06-30

    Annotation of the transcriptome of the dimorphic fungus Paracoccidioides brasiliensis has set the grounds for a global understanding of its metabolism in both mycelium and yeast forms. This fungus is able to use the main carbohydrate sources, including starch, and it can store reduced carbons in the form of glycogen and trehalose; these provide energy reserves that are relevant for metabolic adaptation, protection against stress and infectivity mechanisms. The glyoxylate cycle, which is also involved in pathogenicity, is present in this fungus. Classical pathways of lipid biosynthesis and degradation, including those of ketone body and sterol production, are well represented in the database of P. brasiliensis. It is able to synthesize de novo all nucleotides and amino acids, with the sole exception of asparagine, which was confirmed by the fungus growth in minimal medium. Sulfur metabolism, as well as the accessory synthetic pathways of vitamins and co-factors, are likely to exist in this fungus.

  19. Fungi associated with decay in treated Douglas-fir transmission poles. [Poria carbonica and Poria placenta

    SciTech Connect

    Zabel, R.A.; Lombard, F.F.; Kenderes, A.M.

    1980-01-01

    Decay was detected by cultural methods in 190 of 952 (approximately 20%) treated Douglas-fir transmission poles installed for up to 10 years in the north-eastern United States. Preservative systems and treatments for the poles sampled were penta in petroleum oil, penta in liquefied petroluem gas, chromated copper arsenate, and ammoniacal copper arsenate. Isolations were made from various radial positions on several incrememt cores selected from the groundline zone and deep check vicinity for each pole. The decay was in early stages, often localized, and in many cases, detectable only by cultural means. The decay fungi, representing 19 identified species, were isolated primarily from untreated inner pole sections and at the groundline. Poria carbonica, a decay fungus known primarily from the western United States, and Poria placenta were the two species isolated most frequently. Six of the nineteen species were in the monocaryon nuclear condition and identified by cross matching with known monocaryon isolates and subsequent formation of clamp connections. Decay frequency in the poles generally increased with check depth. The time of occurrence and location of the decay in many poles suggests that in some cases early decay may escape preservative treatment or becomes established shortly thereafter in the storage yard. Decay may also start shortly after installation and be associated with check development into untreated wood. The data suggest that pole preparation or treatment practices that would increase preservative penetration and reduce check development would minimize decay development. (Refs. 11).

  20. Axions from wall decay

    SciTech Connect

    Chang, S; Hagmann, C; Sikivie, P

    2001-01-08

    The authors discuss the decay of axion walls bounded by strings and present numerical simulations of the decay process. In these simulations, the decay happens immediately, in a time scale of order the light travel time, and the average energy of the radiated axions is {approx_equal} 7m{sub a} for v{sub a}/m{sub a} {approx_equal} 500. is found to increase approximately linearly with ln(v{sub a}/m{sub a}). Extrapolation of this behavior yields {approx_equal} 60 m{sub a} in axion models of interest.

  1. Modulated curvaton decay

    SciTech Connect

    Assadullahi, Hooshyar; Wands, David; Firouzjahi, Hassan; Namjoo, Mohammad Hossein E-mail: firouz@mail.ipm.ir E-mail: david.wands@port.ac.uk

    2013-03-01

    We study primordial density perturbations generated by the late decay of a curvaton field whose decay rate may be modulated by the local value of another isocurvature field, analogous to models of modulated reheating at the end of inflation. We calculate the primordial density perturbation and its local-type non-Gaussianity using the sudden-decay approximation for the curvaton field, recovering standard curvaton and modulated reheating results as limiting cases. We verify the Suyama-Yamaguchi inequality between bispectrum and trispectrum parameters for the primordial density field generated by multiple field fluctuations, and find conditions for the bound to be saturated.

  2. Chaetochromones A and B, two new polyketides from the fungus Chaetomium indicum (CBS.860.68).

    PubMed

    Lu, Keyang; Zhang, Yisheng; Li, Li; Wang, Xuewei; Ding, Gang

    2013-01-01

    Chaetochromones A (1) and B (2), two novel polyketides, were isolated from the crude extract of fungus Chaetomium indicum (CBS.860.68) together with three known analogues PI-3(3), PI-4 (4) and SB236050 (5). The structures of these compounds were determined by HRESI-MS and NMR experiments. Chaetochromones A (1) and B (2) are a member of the polyketides family, which might originate from a similar biogenetic pathway as the known compounds PI-3 (3), PI-4 (4) and SB236050 (5). The biological activities of these secondary metabolites were evaluated against eight plant pathogens, including Alternaria alternata, Ilyonectria radicicola, Trichoderma viride pers, Aspergillus niger, Fusarium verticillioide, Irpex lacteus (Fr.), Poria placenta (Fr.) Cooke and Coriolus versicolor (L.) Quél. Compound 1 displayed moderate inhibitory rate (>60%) against the brown rot fungus Poria placenta (Fr.) Cooke, which causes significant wood decay. In addition, the cytotoxic activities against three cancer cell lines A549, MDA-MB-231, PANC-1 were also tested, without any inhibitory activities being detected. PMID:24013408

  3. RARE KAON DECAYS.

    SciTech Connect

    LITTENBERG, L.

    2005-07-19

    Lepton flavor violation (LFV) experiments have probed sensitivities corresponding to mass scales of well over 100 TeV, making life difficult for models predicting accessible LFV in kaon decay and discouraging new dedicated experiments of this type.

  4. Radiative B Decays

    SciTech Connect

    Bard, D.; /Imperial Coll., London

    2011-11-23

    I discuss recent results in radiative B decays from the Belle and BaBar collaborations. I report new measurements of the decay rate and CP asymmetries in b {yields} s{gamma} and b {yields} d{gamma} decays, and measurements of the photon spectrum in b {yields} s{gamma}. Radiative penguin decays are flavour changing neutral currents which do not occur at tree level in the standard model (SM), but must proceed via one loop or higher order diagrams. These transitions are therefore suppressed in the SM, but offer access to poorlyknown SM parameters and are also a sensitive probe of new physics. In the SM, the rate is dominated by the top quark contribution to the loop, but non-SM particles could also contribute with a size comparable to leading SM contributions. The new physics effects are potentially large which makes them theoretically very interesting, but due to their small branching fractions they are typically experimentally challenging.

  5. Charmless B Decays

    SciTech Connect

    Gradl, Wolfgang; /Edinburgh U.

    2007-03-06

    Rare charmless hadronic B decays are a good testing ground for the standard model. The dominant amplitudes contributing to this class of B decays are CKM suppressed tree diagrams and b {yields} s or b {yields} d loop diagrams (''penguins''). These decays can be used to study interfering standard model (SM) amplitudes and CP violation. They are sensitive to the presence of new particles in the loops, and they provide valuable information to constrain theoretical models of B decays. The B factories BABAR at SLAC and Belle at KEK produce B mesons in the reaction e{sup +}e{sup -} {yields} {Upsilon}(4S) {yields} B{bar B}. So far they have collected integrated luminosities of about 406 fb{sup -1} and 600 fb{sup -1}, respectively. The results presented here are based on subsets of about 200-500 fb{sup -1} and are preliminary unless a journal reference is given.

  6. Comparative Study of Nest Architecture and Colony Structure of the Fungus-Growing Ants, Mycocepurus goeldii and M. smithii

    PubMed Central

    Rabeling, C.; Verhaagh, M.; Engels, W.

    2007-01-01

    Nest architecture and demography of the non leaf-cutting fungus-growing ant species Mycocepurus goeldii and M. smithii (Attini: Formicidae) were studied in an agroforest habitat near Manaus, Brazil during the excavation of 13 nests. Both species built their nests in two different ways. The first type possessed a “tree-like” architecture, in which a vertical tunnel led downwards and lateral tunnels branched off at 90° angles from the main tunnel, with a chamber at the end of each side branch. Alternatively, other nests displayed a “necklace-like” architecture, where the main tunnel also led down vertically, but entered each chamber from the top and exited it at the bottom, resulting in an architecture where chambers appeared like pearls on a necklace. The nest systems of M. goeldii and M. smithii consisted of 1–21 or 1–15 chambers, respectively. Of 199 excavated chambers, 57 % contained fungus-gardens. Chambers not containing fungus gardens were filled with organic matter from decaying fungus gardens or earthworm feces. Only M. smithii workers deposited loose soil in abandoned chambers during the construction of new nest chambers. Workers of M. smithii constructed significantly smaller chambers than those of M. goeldii. In both species, fungus garden-containing chambers were larger than non-garden chambers and were homogenously distributed in the soil between 17 cm and 105 cm depth. Neither fungus gardens nor abandoned chambers were encountered more frequently in deeper or shallower soil strata indicating that ants of both species did not abandon shallower versus deeper chambers, or move the colony to deeper soil layers with increasing colony age. Fungus gardens were suspended from the ceiling of the subterranean chambers and originated as small mycelial tufts. Through continual addition of organic debris, the tufts first grew vertically to strands before they expanded laterally until most of the chamber volume was filled with fungus garden curtains

  7. Comparative study of nest architecture and colony structure of the fungus-growing ants, Mycocepurus goeldii and M. smithii.

    PubMed

    Rabeling, C; Verhaagh, M; Engels, W

    2007-01-01

    Nest architecture and demography of the non leaf-cutting fungus-growing ant species Mycocepurus goeldii and M. smithii (Attini: Formicidae) were studied in an agroforest habitat near Manaus, Brazil during the excavation of 13 nests. Both species built their nests in two different ways. The first type possessed a "tree-like" architecture, in which a vertical tunnel led downwards and lateral tunnels branched off at 90 degrees angles from the main tunnel, with a chamber at the end of each side branch. Alternatively, other nests displayed a "necklace-like" architecture, where the main tunnel also led down vertically, but entered each chamber from the top and exited it at the bottom, resulting in an architecture where chambers appeared like pearls on a necklace. The nest systems of M. goeldii and M. smithii consisted of 1-21 or 1-15 chambers, respectively. Of 199 excavated chambers, 57 % contained fungus-gardens. Chambers not containing fungus gardens were filled with organic matter from decaying fungus gardens or earthworm feces. Only M. smithii workers deposited loose soil in abandoned chambers during the construction of new nest chambers. Workers of M. smithii constructed significantly smaller chambers than those of M. goeldii. In both species, fungus garden-containing chambers were larger than non-garden chambers and were homogenously distributed in the soil between 17 cm and 105 cm depth. Neither fungus gardens nor abandoned chambers were encountered more frequently in deeper or shallower soil strata indicating that ants of both species did not abandon shallower versus deeper chambers, or move the colony to deeper soil layers with increasing colony age. Fungus gardens were suspended from the ceiling of the subterranean chambers and originated as small mycelial tufts. Through continual addition of organic debris, the tufts first grew vertically to strands before they expanded laterally until most of the chamber volume was filled with fungus garden curtains. New

  8. Open Flavor Strong Decays

    NASA Astrophysics Data System (ADS)

    García-Tecocoatzi, H.; Bijker, R.; Ferretti, J.; Galatà, G.; Santopinto, E.

    2016-10-01

    In this contribution, we discuss the results of a QM calculation of the open-flavor strong decays of **** light nucleon resonances. These are the results of a recent calculation, where we used a modified ^3P_0 model for the amplitudes and the U(7) algebraic model and the hypercentral quark model to predict the baryon spectrum. The decay amplitudes are compared with the existing experimental data.

  9. Beta-decay rates

    NASA Astrophysics Data System (ADS)

    Borzov, I. N.

    2006-10-01

    Major astrophysical applications involve a huge number of exotic nuclei. Their beta-decay properties play a crucial role in stellar explosive events. An important effort has been developed in last decades to measure the masses and β-decay properties of very neutron-rich nuclei at radioactive nuclear beam facilities. However, most of them cannot be synthesized in terrestrial laboratories and only theoretical predictions can fill the gap. We will concentrate mainly on the β-decay rates needed for stellar r-process modeling and for performing the RNB experiments. An overview of the microscopic approaches to the β-decay strength function is given. The continuum QRPA approach based on the self-consistent ground state description in the framework of the density functional theory is outlined. For the first time, a systematic study of the total β-decay half-lives and delayed neutron emission probabilities takes into account the Gamow Teller and first-forbidden transitions. Due to the shell configuration effects, the first-forbidden decays have a strong impact on the β-decay characteristics of the r-process relevant nuclei at Z≈28, N>50; Z⩾50, N>82 and Z=60 70, N≈126. Suppression of the delayed neutron emission probability is found in nuclei with the neutron excess bigger than one major shell. The effect originates from the high-energy first-forbidden transitions to the states outside the (Q-B)-window in the daughter nuclei. The performance of existing global models for the nuclides near the r-process paths is critically analyzed and confronted with the recent RIB experiments in the regions of 78Ni, 132Sn and “east” of 208Pb.

  10. The role of mites in insect-fungus associations.

    PubMed

    Hofstetter, R W; Moser, J C

    2014-01-01

    The interactions among insects, mites, and fungi are diverse and complex but poorly understood in most cases. Associations among insects, mites, and fungi span an almost incomprehensible array of ecological interactions and evolutionary histories. Insects and mites often share habitats and resources and thus interact within communities. Many mites and insects rely on fungi for nutrients, and fungi benefit from them with regard to spore dispersal, habitat provision, or nutrient resources. Mites have important impacts on community dynamics, ecosystem processes, and biodiversity within many insect-fungus systems. Given that mites are understudied but highly abundant, they likely have bigger, more important, and more widespread impacts on communities than previously recognized. We describe mutualistic and antagonistic effects of mites on insect-fungus associations, explore the processes that underpin ecological and evolutionary patterns of these multipartite communities, review well-researched examples of the effects of mites on insect-fungus associations, and discuss approaches for studying mites within insect-fungus communities.

  11. An insect parasitoid carrying an ochratoxin producing fungus

    NASA Astrophysics Data System (ADS)

    Vega, Fernando E.; Posada, Francisco; Gianfagna, Thomas J.; Chaves, Fabio C.; Peterson, Stephen W.

    2006-06-01

    The insect parasitoid Prorops nasuta has been introduced from Africa to many coffee-producing countries in an attempt to control the coffee berry borer. In this paper, we report on the sequencing of the ITS LSU-rDNA and beta-tubulin loci used to identify a fungus isolated from the cuticle of a P. nasuta that emerged from coffee berries infected with the coffee berry borer. The sequences were compared with deposits in GenBank and the fungus was identified as Aspergillus westerdijkiae. The fungus tested positive for ochratoxin A production, with varying levels depending on the media in which it was grown. These results raise the possibility that an insect parasitoid might be disseminating an ochratoxin-producing fungus in coffee plantations.

  12. HALF-LIVES OF LONG-LIVED ALPHA DECAY, BETA DECAY, ELECTRON CAPTURE DECAY, BETA BETA-DECAY, PROTON DECAY AND SPONTANEOUS FISSION DECAY NUCLIDES.

    SciTech Connect

    HOLDEN, H.E.

    2003-08-08

    In his review of radionuclides for dating purposes, Roth noted that there were a large number of nuclides, normally considered ''stable'' but which are radioactive with a very long half-life. Roth suggested that I review the data on the half-life values of these long-lived nuclides for the 2001 Atomic Weights Commission meeting in Brisbane. I provided a report, BNL-NCS-68377, to fulfill Roth's request. Peiser has now made a similar suggestion that I review these data for our next Commission meeting in Ottawa for their possible inclusion in our Tables. These half-life values for long-lived nuclides include those due to various decay modes, {alpha}-decay, {beta}-decay, electron capture decay, {beta}{beta}-decay, proton decay and spontaneous fission decay. This data review (post Brisbane) provides an update to the recommendation of the 2001 review.

  13. The efficacy of six elite isolates of the fungus Chondrostereum purpureum against the sprouting of European aspen.

    PubMed

    Hamberg, Leena; Hantula, Jarkko

    2016-04-15

    The sprouting of broad-leaved trees after cutting is problematic in forest regeneration areas, along roads and railways, under electric power and above gas pipe lines. In Finland, one of the most difficult species to control in these areas is the European aspen (Populus tremula), which produces both stump sprouts and root suckers after saplings have been cut. In this study, we investigated whether a decay fungus of broad-leaved trees, Chondrostereum purpureum, could be used as a biological control agent against aspen sprouting. The efficacy of six elite strains of C. purpureum (improved earlier in a breeding process) was investigated on aspen for three years. The most efficient C. purpureum strain, R53, tested earlier on birch (Betula pendula and B. pubescens), was efficient in causing mortality of aspen stumps and preventing the development of root suckers. With this strain, stump mortality was 78%, while significantly lower in control stumps which were cut only (47%). Aspen trees in the vicinity of the treatments (within a 10 m radius around each sapling) decreased the efficacy of C. purpureum. This study shows that the decay fungus C. purpureum can successfully be used in the sprout control of aspen saplings.

  14. Biological control of Ascaris suum eggs by Pochonia chlamydosporia fungus.

    PubMed

    Ferreira, Sebastião Rodrigo; de Araújo, Jackson Victor; Braga, Fábio Ribeiro; Araujo, Juliana Milani; Frassy, Luiza Neme; Ferreira, Aloízio Soares

    2011-12-01

    Ascaris suum is a gastrointestinal nematode parasite of swines. The aim of this study was to observe Pochonia chlamydosporia fungus on biological control of A. suum eggs after fungus passage through swines gastrointestinal tract. Eighteen pigs, previously dewormed, were randomly divided into three groups: group 1, treated with the fungus isolate VC4; group 2, treated with the fungus isolate VC1 and group 3 did not receive fungus (control). In the treated groups, each animal received a 9 g single dose of mycelium mass containing P. chlamydosporia (VC1 or VC4). Thereafter, animal fecal samples were collected at the following intervals: 8, 12, 24, 36, 48, 72 and 96 h after treatment beginning and these were poured in Petri dishes containing 2% water-agar culture medium. Then, 1,000 A. suum eggs were poured into each dish and kept in an incubator at 26 °C and in the dark for 30 days. After this period, approximately 100 eggs were removed from each Petri dish and morphologically analyzed under light microscopy following the ovicidal activity parameters. The higher percentage observed for isolated VC4 eggs destruction was 57.5% (36 h) after fungus administration and for isolate VC1 this percentage was 45.8% (24 h and 72 h) (p > 0.01). P. chlamydosporia remained viable after passing through the gastrointestinal tract of swines, maintaining its ability of destroying A. suum eggs.

  15. Biological control of Ascaris suum eggs by Pochonia chlamydosporia fungus.

    PubMed

    Ferreira, Sebastião Rodrigo; de Araújo, Jackson Victor; Braga, Fábio Ribeiro; Araujo, Juliana Milani; Frassy, Luiza Neme; Ferreira, Aloízio Soares

    2011-12-01

    Ascaris suum is a gastrointestinal nematode parasite of swines. The aim of this study was to observe Pochonia chlamydosporia fungus on biological control of A. suum eggs after fungus passage through swines gastrointestinal tract. Eighteen pigs, previously dewormed, were randomly divided into three groups: group 1, treated with the fungus isolate VC4; group 2, treated with the fungus isolate VC1 and group 3 did not receive fungus (control). In the treated groups, each animal received a 9 g single dose of mycelium mass containing P. chlamydosporia (VC1 or VC4). Thereafter, animal fecal samples were collected at the following intervals: 8, 12, 24, 36, 48, 72 and 96 h after treatment beginning and these were poured in Petri dishes containing 2% water-agar culture medium. Then, 1,000 A. suum eggs were poured into each dish and kept in an incubator at 26 °C and in the dark for 30 days. After this period, approximately 100 eggs were removed from each Petri dish and morphologically analyzed under light microscopy following the ovicidal activity parameters. The higher percentage observed for isolated VC4 eggs destruction was 57.5% (36 h) after fungus administration and for isolate VC1 this percentage was 45.8% (24 h and 72 h) (p > 0.01). P. chlamydosporia remained viable after passing through the gastrointestinal tract of swines, maintaining its ability of destroying A. suum eggs. PMID:21796329

  16. Suppressed Charmed B Decay

    SciTech Connect

    Snoek, Hella Leonie

    2009-06-02

    This thesis describes the measurement of the branching fractions of the suppressed charmed B0 → D*- a0+ decays and the non-resonant B0 → D*- ηπ+ decays in approximately 230 million Υ(4S) → B$\\bar{B}$ events. The data have been collected with the BABAR detector at the PEP-II B factory at the Stanford Linear Accelerator Center in California. Theoretical predictions of the branching fraction of the B0 → D*- a{sub 0}+ decays show large QCD model dependent uncertainties. Non-factorizing terms, in the naive factorization model, that can be calculated by QCD factorizing models have a large impact on the branching fraction of these decay modes. The predictions of the branching fractions are of the order of 10-6. The measurement of the branching fraction gives more insight into the theoretical models. In general a better understanding of QCD models will be necessary to conduct weak interaction physics at the next level. The presence of CP violation in electroweak interactions allows the differentiation between matter and antimatter in the laws of physics. In the Standard Model, CP violation is incorporated in the CKM matrix that describes the weak interaction between quarks. Relations amongst the CKM matrix elements are used to present the two relevant parameters as the apex of a triangle (Unitarity Triangle) in a complex plane. The over-constraining of the CKM triangle by experimental measurements is an important test of the Standard Model. At this moment no stringent direct measurements of the CKM angle γ, one of the interior angles of the Unitarity Triangle, are available. The measurement of the angle γ can be performed using the decays of neutral B mesons. The B0 → D*- a0+ decay is sensitive to the angle γ and, in comparison to the current decays that are being employed, could significantly

  17. Decay of superdeformed bands

    SciTech Connect

    Carpenter, M.P.; Khoo, T.L.; Lauritsen, T.

    1995-12-31

    One of the major challenges in the study of superdeformation is to directly connect the large number of superdeformed bands now known to the yrast states. In this way, excitation energies, spins and parities can be assigned to the levels in the second well which is essential to establish the collective and single-particle components of these bands. This paper will review some of the progress which has been made to understand the decay of superdeformed bands using the new arrays including the measurement of the total decay spectrum and the establishment of direct one-step decays from the superdeformed band to the yrast line in {sup 194}Hg. 42 refs., 5 figs.

  18. Kinetics of Radioactive Decay

    NASA Astrophysics Data System (ADS)

    Nagy, S.

    At present there are over 3,000 known nuclides (see the Appendix in Vol. 2 on the “Table of the Nuclides”), 265 of which are stable, while the rest, i.e., more than 90% of them, are radioactive. The chemical applications of the specific isotopes of chemical elements are mostly connected with the latter group, including quite a number of metastable nuclear isomers, making the kinetics of radioactive decay an important chapter of nuclear chemistry. After giving a phenomenological and then a statistical interpretation of the exponential law, the various combinations of individual decay processes as well as the cases of equilibrium and nonequilibrium will be discussed. Half-life systematics of the different decay modes detailed in Chaps. 2 and 4 of this volume are also summarized.

  19. Weak decay of hypernuclei

    SciTech Connect

    Grace, R.

    1983-01-01

    The Moby Dick spectrometer (at BNL) in coincidence with a range spectrometer and a TOF neutron detector will be used to study the weak decay modes of /sup 12/C. The Moby Dick spectrometer will be used to reconstruct and tag events in which specific hypernuclear states are formed in the reaction K/sup -/ + /sup 12/C ..-->.. ..pi../sup -/ + /sup 12/C. Subsequent emission of decay products (pions, protons and neutrons) in coincidence with the fast forward pion will be detected in a time and range spectrometer, and a neutron detector.

  20. Search for the decay

    NASA Astrophysics Data System (ADS)

    Aaij, R.; Adeva, B.; Adinolfi, M.; Affolder, A.; Ajaltouni, Z.; Akar, S.; Albrecht, J.; Alessio, F.; Alexander, M.; Ali, S.; Alkhazov, G.; Alvarez Cartelle, P.; Alves, A. A.; Amato, S.; Amerio, S.; Amhis, Y.; An, L.; Anderlini, L.; Anderson, J.; Andreotti, M.; Andrews, J. E.; Appleby, R. B.; Aquines Gutierrez, O.; Archilli, F.; d'Argent, P.; Artamonov, A.; Artuso, M.; Aslanides, E.; Auriemma, G.; Baalouch, M.; Bachmann, S.; Back, J. J.; Badalov, A.; Baesso, C.; Baldini, W.; Barlow, R. J.; Barschel, C.; Barsuk, S.; Barter, W.; Batozskaya, V.; Battista, V.; Bay, A.; Beaucourt, L.; Beddow, J.; Bedeschi, F.; Bediaga, I.; Bel, L. J.; Belyaev, I.; Ben-Haim, E.; Bencivenni, G.; Benson, S.; Benton, J.; Berezhnoy, A.; Bernet, R.; Bertolin, A.; Bettler, M.-O.; van Beuzekom, M.; Bien, A.; Bifani, S.; Bird, T.; Birnkraut, A.; Bizzeti, A.; Blake, T.; Blanc, F.; Blouw, J.; Blusk, S.; Bocci, V.; Bondar, A.; Bondar, N.; Bonivento, W.; Borghi, S.; Borsato, M.; Bowcock, T. J. V.; Bowen, E.; Bozzi, C.; Braun, S.; Brett, D.; Britsch, M.; Britton, T.; Brodzicka, J.; Brook, N. H.; Bursche, A.; Buytaert, J.; Cadeddu, S.; Calabrese, R.; Calvi, M.; Calvo Gomez, M.; Campana, P.; Campora Perez, D.; Capriotti, L.; Carbone, A.; Carboni, G.; Cardinale, R.; Cardini, A.; Carniti, P.; Carson, L.; Carvalho Akiba, K.; Casanova Mohr, R.; Casse, G.; Cassina, L.; Castillo Garcia, L.; Cattaneo, M.; Cauet, Ch.; Cavallero, G.; Cenci, R.; Charles, M.; Charpentier, Ph.; Chefdeville, M.; Chen, S.; Cheung, S.-F.; Chiapolini, N.; Chrzaszcz, M.; Cid Vidal, X.; Ciezarek, G.; Clarke, P. E. L.; Clemencic, M.; Cliff, H. V.; Closier, J.; Coco, V.; Cogan, J.; Cogneras, E.; Cogoni, V.; Cojocariu, L.; Collazuol, G.; Collins, P.; Comerma-Montells, A.; Contu, A.; Cook, A.; Coombes, M.; Coquereau, S.; Corti, G.; Corvo, M.; Couturier, B.; Cowan, G. A.; Craik, D. C.; Crocombe, A.; Cruz Torres, M.; Cunliffe, S.; Currie, R.; D'Ambrosio, C.; Dalseno, J.; David, P. N. Y.; Davis, A.; De Bruyn, K.; De Capua, S.; De Cian, M.; De Miranda, J. M.; De Paula, L.; De Silva, W.; De Simone, P.; Dean, C.-T.; Decamp, D.; Deckenhoff, M.; Del Buono, L.; Déléage, N.; Derkach, D.; Deschamps, O.; Dettori, F.; Dey, B.; Di Canto, A.; Di Ruscio, F.; Dijkstra, H.; Donleavy, S.; Dordei, F.; Dorigo, M.; Dosil Suárez, A.; Dossett, D.; Dovbnya, A.; Dreimanis, K.; Dujany, G.; Dupertuis, F.; Durante, P.; Dzhelyadin, R.; Dziurda, A.; Dzyuba, A.; Easo, S.; Egede, U.; Egorychev, V.; Eidelman, S.; Eisenhardt, S.; Eitschberger, U.; Ekelhof, R.; Eklund, L.; El Rifai, I.; Elsasser, Ch.; Ely, S.; Esen, S.; Evans, H. M.; Evans, T.; Falabella, A.; Färber, C.; Farinelli, C.; Farley, N.; Farry, S.; Fay, R.; Ferguson, D.; Fernandez Albor, V.; Ferrari, F.; Ferreira Rodrigues, F.; Ferro-Luzzi, M.; Filippov, S.; Fiore, M.; Fiorini, M.; Firlej, M.; Fitzpatrick, C.; Fiutowski, T.; Fol, P.; Fontana, M.; Fontanelli, F.; Forty, R.; Francisco, O.; Frank, M.; Frei, C.; Frosini, M.; Fu, J.; Furfaro, E.; Gallas Torreira, A.; Galli, D.; Gallorini, S.; Gambetta, S.; Gandelman, M.; Gandini, P.; Gao, Y.; García Pardiñas, J.; Garofoli, J.; Garra Tico, J.; Garrido, L.; Gascon, D.; Gaspar, C.; Gastaldi, U.; Gauld, R.; Gavardi, L.; Gazzoni, G.; Geraci, A.; Gerick, D.; Gersabeck, E.; Gersabeck, M.; Gershon, T.; Ghez, Ph.; Gianelle, A.; Gianì, S.; Gibson, V.; Giubega, L.; Gligorov, V. V.; Göbel, C.; Golubkov, D.; Golutvin, A.; Gomes, A.; Gotti, C.; Grabalosa Gándara, M.; Graciani Diaz, R.; Granado Cardoso, L. A.; Graugés, E.; Graverini, E.; Graziani, G.; Grecu, A.; Greening, E.; Gregson, S.; Griffith, P.; Grillo, L.; Grünberg, O.; Gui, B.; Gushchin, E.; Guz, Yu.; Gys, T.; Hadjivasiliou, C.; Haefeli, G.; Haen, C.; Haines, S. C.; Hall, S.; Hamilton, B.; Hampson, T.; Han, X.; Hansmann-Menzemer, S.; Harnew, N.; Harnew, S. T.; Harrison, J.; He, J.; Head, T.; Heijne, V.; Hennessy, K.; Henrard, P.; Henry, L.; Hernando Morata, J. A.; van Herwijnen, E.; Heß, M.; Hicheur, A.; Hill, D.; Hoballah, M.; Hombach, C.; Hulsbergen, W.; Humair, T.; Hussain, N.; Hutchcroft, D.; Hynds, D.; Idzik, M.; Ilten, P.; Jacobsson, R.; Jaeger, A.; Jalocha, J.; Jans, E.; Jawahery, A.; Jing, F.; John, M.; Johnson, D.; Jones, C. R.; Joram, C.; Jost, B.; Jurik, N.; Kandybei, S.; Kanso, W.; Karacson, M.; Karbach, T. M.; Karodia, S.; Kelsey, M.; Kenyon, I. R.; Kenzie, M.; Ketel, T.; Khanji, B.; Khurewathanakul, C.; Klaver, S.; Klimaszewski, K.; Kochebina, O.; Kolpin, M.; Komarov, I.; Koopman, R. F.; Koppenburg, P.; Korolev, M.; Kravchuk, L.; Kreplin, K.; Kreps, M.; Krocker, G.; Krokovny, P.; Kruse, F.; Kucewicz, W.; Kucharczyk, M.; Kudryavtsev, V.; Kurek, K.; Kvaratskheliya, T.; La Thi, V. N.; Lacarrere, D.; Lafferty, G.; Lai, A.; Lambert, D.; Lambert, R. W.; Lanfranchi, G.; Langenbruch, C.; Langhans, B.; Latham, T.; Lazzeroni, C.; Le Gac, R.; van Leerdam, J.; Lees, J.-P.; Lefèvre, R.; Leflat, A.; Lefrançois, J.; Leroy, O.; Lesiak, T.; Leverington, B.; Li, Y.; Likhomanenko, T.; Liles, M.; Lindner, R.; Linn, C.; Lionetto, F.; Liu, B.; Lohn, S.; Longstaff, I.; Lopes, J. H.; Lucchesi, D.; Lucio Martinez, M.; Luo, H.; Lupato, A.; Luppi, E.; Lupton, O.; Machefert, F.; Maciuc, F.; Maev, O.; Malde, S.; Malinin, A.; Manca, G.; Mancinelli, G.; Manning, P.; Mapelli, A.; Maratas, J.; Marchand, J. F.; Marconi, U.; Marin Benito, C.; Marino, P.; Märki, R.; Marks, J.; Martellotti, G.; Martinelli, M.; Martinez Santos, D.; Martinez Vidal, F.; Martins Tostes, D.; Massafferri, A.; Matev, R.; Mathad, A.; Mathe, Z.; Matteuzzi, C.; Matthieu, K.; Mauri, A.; Maurin, B.; Mazurov, A.; McCann, M.; McCarthy, J.; McNab, A.; McNulty, R.; Meadows, B.; Meier, F.; Meissner, M.; Merk, M.; Milanes, D. A.; Minard, M.-N.; Mitzel, D. S.; Molina Rodriguez, J.; Monteil, S.; Morandin, M.; Morawski, P.; Mordà, A.; Morello, M. J.; Moron, J.; Morris, A. B.; Mountain, R.; Muheim, F.; Müller, J.; Müller, K.; Müller, V.; Mussini, M.; Muster, B.; Naik, P.; Nakada, T.; Nandakumar, R.; Nasteva, I.; Needham, M.; Neri, N.; Neubert, S.; Neufeld, N.; Neuner, M.; Nguyen, A. D.; Nguyen, T. D.; Nguyen-Mau, C.; Niess, V.; Niet, R.; Nikitin, N.; Nikodem, T.; Ninci, D.; Novoselov, A.; O'Hanlon, D. P.; Oblakowska-Mucha, A.; Obraztsov, V.; Ogilvy, S.; Okhrimenko, O.; Oldeman, R.; Onderwater, C. J. G.; Osorio Rodrigues, B.; Otalora Goicochea, J. M.; Otto, A.; Owen, P.; Oyanguren, A.; Palano, A.; Palombo, F.; Palutan, M.; Panman, J.; Papanestis, A.; Pappagallo, M.; Pappalardo, L. L.; Parkes, C.; Passaleva, G.; Patel, G. D.; Patel, M.; Patrignani, C.; Pearce, A.; Pellegrino, A.; Penso, G.; Pepe Altarelli, M.; Perazzini, S.; Perret, P.; Pescatore, L.; Petridis, K.; Petrolini, A.; Petruzzo, M.; Picatoste Olloqui, E.; Pietrzyk, B.; Pilař, T.; Pinci, D.; Pistone, A.; Playfer, S.; Plo Casasus, M.; Poikela, T.; Polci, F.; Poluektov, A.; Polyakov, I.; Polycarpo, E.; Popov, A.; Popov, D.; Popovici, B.; Potterat, C.; Price, E.; Price, J. D.; Prisciandaro, J.; Pritchard, A.; Prouve, C.; Pugatch, V.; Puig Navarro, A.; Punzi, G.; Qian, W.; Quagliani, R.; Rachwal, B.; Rademacker, J. H.; Rakotomiaramanana, B.; Rama, M.; Rangel, M. S.; Raniuk, I.; Rauschmayr, N.; Raven, G.; Redi, F.; Reichert, S.; Reid, M. M.; dos Reis, A. C.; Ricciardi, S.; Richards, S.; Rihl, M.; Rinnert, K.; Rives Molina, V.; Robbe, P.; Rodrigues, A. B.; Rodrigues, E.; Rodriguez Lopez, J. A.; Rodriguez Perez, P.; Roiser, S.; Romanovsky, V.; Romero Vidal, A.; Rotondo, M.; Rouvinet, J.; Ruf, T.; Ruiz, H.; Ruiz Valls, P.; Saborido Silva, J. J.; Sagidova, N.; Sail, P.; Saitta, B.; Salustino Guimaraes, V.; Sanchez Mayordomo, C.; Sanmartin Sedes, B.; Santacesaria, R.; Santamarina Rios, C.; Santovetti, E.; Sarti, A.; Satriano, C.; Satta, A.; Saunders, D. M.; Savrina, D.; Schiller, M.; Schindler, H.; Schlupp, M.; Schmelling, M.; Schmelzer, T.; Schmidt, B.; Schneider, O.; Schopper, A.; Schune, M.-H.; Schwemmer, R.; Sciascia, B.; Sciubba, A.; Semennikov, A.; Sepp, I.; Serra, N.; Serrano, J.; Sestini, L.; Seyfert, P.; Shapkin, M.; Shapoval, I.; Shcheglov, Y.; Shears, T.; Shekhtman, L.; Shevchenko, V.; Shires, A.; Silva Coutinho, R.; Simi, G.; Sirendi, M.; Skidmore, N.; Skillicorn, I.; Skwarnicki, T.; Smith, E.; Smith, E.; Smith, J.; Smith, M.; Snoek, H.; Sokoloff, M. D.; Soler, F. J. P.; Soomro, F.; Souza, D.; Souza De Paula, B.; Spaan, B.; Spradlin, P.; Sridharan, S.; Stagni, F.; Stahl, M.; Stahl, S.; Steinkamp, O.; Stenyakin, O.; Sterpka, F.; Stevenson, S.; Stoica, S.; Stone, S.; Storaci, B.; Stracka, S.; Straticiuc, M.; Straumann, U.; Stroili, R.; Sun, L.; Sutcliffe, W.; Swientek, K.; Swientek, S.; Syropoulos, V.; Szczekowski, M.; Szczypka, P.; Szumlak, T.; T'Jampens, S.; Tekampe, T.; Teklishyn, M.; Tellarini, G.; Teubert, F.; Thomas, C.; Thomas, E.; van Tilburg, J.; Tisserand, V.; Tobin, M.; Todd, J.; Tolk, S.; Tomassetti, L.; Tonelli, D.; Topp-Joergensen, S.; Torr, N.; Tournefier, E.; Tourneur, S.; Trabelsi, K.; Tran, M. T.; Tresch, M.; Trisovic, A.; Tsaregorodtsev, A.; Tsopelas, P.; Tuning, N.; Ukleja, A.; Ustyuzhanin, A.; Uwer, U.; Vacca, C.; Vagnoni, V.; Valenti, G.; Vallier, A.; Vazquez Gomez, R.; Vazquez Regueiro, P.; Vázquez Sierra, C.; Vecchi, S.; Velthuis, J. J.; Veltri, M.; Veneziano, G.; Vesterinen, M.; Viaud, B.; Vieira, D.; Vieites Diaz, M.; Vilasis-Cardona, X.; Vollhardt, A.; Volyanskyy, D.; Voong, D.; Vorobyev, A.; Vorobyev, V.; Voß, C.; de Vries, J. A.; Waldi, R.; Wallace, C.; Wallace, R.; Walsh, J.; Wandernoth, S.; Wang, J.; Ward, D. R.; Watson, N. K.; Websdale, D.; Weiden, A.; Whitehead, M.; Wiedner, D.; Wilkinson, G.; Wilkinson, M.; Williams, M.; Williams, M. P.; Williams, M.; Wilson, F. F.; Wimberley, J.; Wishahi, J.; Wislicki, W.; Witek, M.; Wormser, G.; Wotton, S. A.; Wright, S.; Wyllie, K.; Xie, Y.; Xu, Z.; Yang, Z.; Yuan, X.; Yushchenko, O.; Zangoli, M.; Zavertyaev, M.; Zhang, L.; Zhang, Y.; Zhelezov, A.; Zhokhov, A.; Zhong, L.

    2015-08-01

    A search for decays is performed using 3 .0 fb1- of pp collision data recorded by the LHCb experiment during 2011 and 2012. The f 0(980) meson is reconstructed through its decay to the π + π - final state in the mass window 900 MeV /c 2 < m( π + π -) < 1080 MeV /c 2. No significant signal is observed. The first upper limits on the branching fraction of are set at 90 % (95 %) confidence level. [Figure not available: see fulltext.

  1. Iron competition in fungus-plant interactions

    PubMed Central

    López-Berges, Manuel S.; Turrà, David; Capilla, Javier; Schafferer, Lukas; Matthijs, Sandra; Jöchl, Christoph; Cornelis, Pierre; Guarro, Josep; Haas, Hubertus; Di Pietro, Antonio

    2013-01-01

    Soilborne fungal pathogens are highly persistent and provoke important crop losses. During saprophytic and infectious stages in the soil, these organisms face situations of nutrient limitation and lack of essential elements, such as iron. We investigated the role of the bZIP transcription factor HapX as a central regulator of iron homeostasis and virulence in the vascular wilt fungus Fusarium oxysporum. This root-infecting plant pathogen attacks more than hundred different crops and is an emerging human opportunistic invader. Although iron uptake remains unaffected in a strain lacking HapX, de-repression of genes implicated in iron-consuming processes such as respiration, amino acid metabolism, TCA cycle and heme biosynthesis lead to severely impaired growth under iron-limiting conditions. HapX is required for full virulence of F. oxysporum in tomato plants and essential for infection in immunodepressed mice. Virulence attenuation of the ΔhapX strain on tomato plants is more pronounced by co-inoculation of roots with the biocontrol strain Pseudomonas putida KT2440, but not with a mutant deficient in siderophores production. These results demonstrate that HapX is required for iron competition of F. oxysporum in the tomato rhizosphere and establish a conserved role for HapX-mediated iron homeostasis in fungal infection of plants and mammals. PMID:23299422

  2. Malaria mosquitoes attracted by fatal fungus.

    PubMed

    George, Justin; Jenkins, Nina E; Blanford, Simon; Thomas, Matthew B; Baker, Thomas C

    2013-01-01

    Insect-killing fungi such as Beauveria bassiana are being evaluated as possible active ingredients for use in novel biopesticides against mosquito vectors that transmit malaria. Fungal pathogens infect through contact and so applications of spores to surfaces such as walls, nets, or other resting sites provide possible routes to infect mosquitoes in and around domestic dwellings. However, some insects can detect and actively avoid fungal spores to reduce infection risk. If true for mosquitoes, such behavior could render the biopesticide approach ineffective. Here we find that the spores of B. bassiana are highly attractive to females of Anopheles stephensi, a major anopheline mosquito vector of human malaria in Asia. We further find that An. stephensi females are preferentially attracted to dead and dying caterpillars infected with B. bassiana, landing on them and subsequently becoming infected with the fungus. Females are also preferentially attracted to cloth sprayed with oil-formulated B. bassiana spores, with 95% of the attracted females becoming infected after a one-minute visit on the cloth. This is the first report of an insect being attracted to a lethal fungal pathogen. The exact mechanisms involved in this behavior remain unclear. Nonetheless, our results indicate that biopesticidal formulations comprising B. bassiana spores will be conducive to attraction and on-source visitation by malaria vectors. PMID:23658757

  3. The role of the symbiotic fungus in the digestive metabolism of two species of fungus-growing ants.

    PubMed

    D'Ettorre, P; Mora, P; Dibangou, V; Rouland, C; Errard, C

    2002-02-01

    Leaf-cutting ants live in an obligatory symbiosis with a fungus which they grow on fresh leaves harvested by workers. This study attempts to clarify the respective role of ants and fungus in the degradation of plant material, in order to highlight the evolutionary basis of this mutualistic association. The symbiotic system of two ant species, Acromyrmex subterraneus subterraneus and Acromyrmex crassispinus, was investigated. To identify the digestive carbohydrases, a total of 19 specific and synthetic plant material substrates were tested on workers from different castes (major and minor), larvae and fungus. Extracts of A. subterraneus and A. crassispinus workers showed high enzymatic activity particularly on starch, maltose, sucrose and alpha-1,4 glucoside. Larvae degraded starch, sucrose, maltose but also laminarin, and all the detected activities were higher than those found for workers. The symbiotic fungus of A. subterraneus was mostly active on laminarin, xylan and cellulose, while the symbiotic fungus of A. crassispinus was mostly active on laminarin, starch, maltose and sucrose. The enzymatic activities of ants and fungus belonging to the same symbiotic system tended not to overlap, suggesting that the association is highly evolved and of an ancient origin.

  4. The first fossil fungus gardens of Isoptera: oldest evidence of symbiotic termite fungiculture (Miocene, Chad basin)

    NASA Astrophysics Data System (ADS)

    Duringer, Philippe; Schuster, Mathieu; Genise, Jorge F.; Likius, Andossa; Mackaye, Hassan Taisso; Vignaud, Patrick; Brunet, Michel

    2006-12-01

    Higher termites of the subfamily Macrotermitinae (fungus-growing termites) are known to build fungus gardens where a symbiotic fungus ( Termitomyces sp.) is cultivated. The fungus grows on a substrate called fungus comb, a structure built with the termites’ own faeces. Here we present the first fossil fungus combs ever found in the world. They were extracted from 7-million-year-old continental sandstone (Chad basin). Fossilized fungus combs have an ovoid morphology with a more or less flattened concave base and a characteristic general alveolar aspect. Under lens, they display a typical millimetre-scale pelletal structure. The latter, as well as the general shape and alveolar aspect, are similar to the morphology of fungus combs from extant fungus-growing termites.

  5. BABAR B Decay Results

    SciTech Connect

    MacFarlane, David B

    2002-03-14

    Data from the first run of the BABAR detector at the PEP II accelerator are presented. Measurements of many rare B decay modes are now possible using the large data sets currently being collected by BABAR. An overview of analysis techniques and results on data collected in 2000 are described.

  6. Cosmology with decaying particles

    SciTech Connect

    Turner, M.S.

    1984-09-01

    We consider a cosmological model in which an unstable massive relic particle species (denoted by X) has an initial mass density relative to baryons ..beta../sup -1/ identically equal rho/sub X//rho/sub B/ >> 1, and then decays recently (redshift z less than or equal to 1000) into particles which are still relativistic today (denoted by R). We write down and solve the coupled equations for the cosmic scale factor a(t), the energy density in the various components (rho/sub X/, rho/sub R/, rho/sub B/), and the growth of linear density perturbations (delta rho/rho). The solutions form a one parameter (..beta..) family of solutions; physically ..beta../sup -1/ approx. = (..cap omega../sub R//..cap omega../sub NR/) x (1 + z/sub D/) = (ratio today of energy density of relativistic to nonrelativistic particles) x (1 + redshift of (decay)). We discuss the observational implications of such a cosmological model and compare our results to earlier results computed in the simultaneous decay approximation. In an appendix we briefly consider the case where one of the decay products of the X is massive and becomes nonrelativistic by the present epoch. 21 references.

  7. Semileptonic B Meson Decays

    SciTech Connect

    Luth, Vera G.; /SLAC

    2012-01-03

    Semileptonic decays of B mesons play a critical role in the determination of the magnitude of the Cabibbo-Kobayashi-Maskawa (CKM) matrix elements V{sub cb} and V{sub ub}. These two quantities are fundamental parameters of the Standard Model and have to be determined experimentally. Over the past decade, the vast samples of B mesons recorded at the B factories at LEP at Cornell University, KEK at Tsukuba, and SLAC at Stanford University have allowed for detailed studies of semileptonic B decays. These decays proceed via first-order weak interactions; thus, they are expected to be free of non-Standard Model contributions and therefore are well suited for the extraction of the quark-mixing parameters. Differential decay rates are combined with theoretical calculations of hadronization effects, leading to a substantially improved knowledge of |V{sub cb}| and |V{sub ub}|. The results are used to constrain the parameters of the CKM matrix and to test the Standard Model predictions for CP-violating effects.

  8. Decay Time of Cathodoluminescence

    ERIC Educational Resources Information Center

    Kraftmakher, Yaakov

    2009-01-01

    Simple measurements of the decay time of cathodoluminescence are described. Cathodoluminescence is used in many devices, including computer monitors, oscilloscopes, radar displays and television tubes. The experimental setup is simple and easy to build. Two oscilloscopes, a function generator, and a fast photodiode are needed for the experiments.…

  9. Tooth decay - early childhood

    MedlinePlus

    Bottle mouth; Bottle carries; Baby bottle tooth decay; Early childhood caries (ECC) ... Your child needs strong, healthy baby teeth to chew food and to talk. Baby teeth also make space in children's jaws for their adult teeth to grow in straight. ...

  10. Extracellular oxidative metabolism of wood decay fungi

    SciTech Connect

    Daniel Cullen

    2010-04-21

    Substantial progress has been made toward understanding the fundamental physiology and genetics of wood decay fungi, microbes that are capable of degrading all major components of plant cell walls. Efficient utilization of lignocellulosic biomass has been hampered in part by limitations in our understanding of enzymatic mechanisms of plant cell wall degradation. This is particularly true of woody substrates where accessibility and high lignin content substantially complicate enzymatic 'deconstruction'. The interdisciplinary research has illuminated enzymatic mechanisms essential for the conversion of lignocellulosics to simple carbohydrates and other small molecular weight products. Progress was in large part dependent on substantial collaborations with the Department of Energy's Joint Genome Institute (JGI) in Walnut Creek and Los Alamos, as well as the Catholic University, Santiago, Chile, the Royal Institute of Technology, Stockholm, the University of Minnesota, St. Paul, and colleagues at the University of Wisconsin and the Forest Products Laboratory. Early accomplishments focused on the development of experimental tools (2, 7, 22, 24-26, 32) and characterization of individual genes and enzymes (1, 3-5, 8, 9, 11, 14, 15, 17, 18, 23, 27, 33). In 2004, the genome of the most intensively studied lignin-degrading fungus, Phanerochaete chrysosporium, was published (21). This milestone lead to additional progress on this important model system (6, 10, 12, 13, 16, 28-31) and was further complemented by genome analysis of other important cellulose-degrading fungi (19, 20). These accomplishments have been highly cited and have paved the way for whole new research areas.

  11. Anatomy of decays

    NASA Astrophysics Data System (ADS)

    Bel, Lennaert; De Bruyn, Kristof; Fleischer, Robert; Mulder, Mick; Tuning, Niels

    2015-07-01

    The decays B {/d 0} → D {/d -} D {/d +} and B {/s 0} → D {/s -} D {/s +} probe the CP-violating mixing phases ϕ d and ϕ s , respectively. The theoretical uncertainty of the corresponding determinations is limited by contributions from penguin topologies, which can be included with the help of the U-spin symmetry of the strong interaction. We analyse the currently available data for B {/d, s 0} → D {/d, s -} D {/d, s +} decays and those with similar dynamics to constrain the involved non-perturbative parameters. Using further information from semileptonic B {/d 0} → D {/d -} ℓ + ν ℓ decays, we perform a test of the factorisation approximation and take non-factorisable SU(3)-breaking corrections into account. The branching ratios of the B {/d 0} → D {/d -} D {/d +}, B {/s 0} → D {/s -} D {/d +} and B {/s 0} → D {/s -} D {/s +}, B {/d 0} → D {/d -} D {/s +} decays show an interesting pattern which can be accommodated through significantly enhanced exchange and penguin annihilation topologies. This feature is also supported by data for the B {/s 0} → D {/d -} D {/d +} channel. Moreover, there are indications of potentially enhanced penguin contributions in the B {/d 0} → D {/d -} D {/d +} and B {/s 0} → D {/s -} D {/s +} decays, which would make it mandatory to control these effects in the future measurements of ϕ d and ϕ s . We discuss scenarios for high-precision measurements in the era of Belle II and the LHCb upgrade.

  12. Isolated Polynucleotides and Methods of Promoting a Morphology in a Fungus

    DOEpatents

    Lasure, Linda L [Fall City, WA; Dai, Ziyu [Richland, WA

    2008-10-21

    The invention includes isolated polynucleotide molecules that are differentially expressed in a native fungus exhibiting a first morphology relative to the native fungus exhibiting a second morphology. The invention includes a method of enhancing a bioprocess utilizing a fungus. A transformed fungus is produced by transforming a fungus with a recombinant polynucleotide molecule. The recombinant polynucleotide molecule contains an isolated polynucleotide sequence linked operably to a promoter. The polynucleotide sequence is expressed to promote a first morphology. The first morphology of the transformed fungus enhances a bioprocess relative to the bioprocess utilizing a second morphology.

  13. Allergens of the entomopathogenic fungus Beauveria bassiana

    PubMed Central

    Westwood, Greg S; Huang, Shih-Wen; Keyhani, Nemat O

    2005-01-01

    Background Beauveria bassiana is an important entomopathogenic fungus currently under development as a bio-control agent for a variety of insect pests. Although reported to be non-toxic to vertebrates, the potential allergenicity of Beauveria species has not been widely studied. Methods IgE-reactivity studies were performed using sera from patients displaying mould hypersensitivity by immunoblot and immunoblot inhibition. Skin reactivity to B. bassiana extracts was measured using intradermal skin testing. Results Immunoblots of fungal extracts with pooled as well as individual sera showed a distribution of IgE reactive proteins present in B. bassiana crude extracts. Proteinase K digestion of extracts resulted in loss of IgE reactive epitopes, whereas EndoH and PNGaseF (glycosidase) treatments resulted in minor changes in IgE reactive banding patterns as determined by Western blots. Immunoblot inhibitions experiments showed complete loss of IgE-binding using self protein, and partial inhibition using extracts from common allergenic fungi including; Alternaria alternata, Aspergillus fumigatus, Cladosporium herbarum, Candida albicans, Epicoccum purpurascens, and Penicillium notatum. Several proteins including a strongly reactive band with an approximate molecular mass of 35 kDa was uninhibited by any of the tested extracts, and may represent B. bassiana specific allergens. Intradermal skin testing confirmed the in vitro results, demonstrating allergenic reactions in a number of individuals, including those who have had occupational exposure to B. bassiana. Conclusions Beauveria bassiana possesses numerous IgE reactive proteins, some of which are cross-reactive among allergens from other fungi. A strongly reactive potential B. bassiana specific allergen (35 kDa) was identified. Intradermal skin testing confirmed the allergenic potential of B. bassiana. PMID:15644142

  14. B Decays Involving Light Mesons

    NASA Astrophysics Data System (ADS)

    Eschrich, Ivo Gough

    Recent BABAR results for decays of B-mesons to combinations of non-charm mesons are presented. This includes B decays to two vector mesons, B → η‧(π, K, ρ) modes, and a comprehensive Dalitz Plot analysis of B → KKK decays.

  15. B Decays Involving Light Mesons

    SciTech Connect

    Eschrich, Ivo Gough; /UC, Irvine

    2007-01-09

    Recent BABAR results for decays of B-mesons to combinations of non-charm mesons are presented. This includes B decays to two vector mesons, B {yields} {eta}{prime}({pi}, K, {rho}) modes, and a comprehensive Dalitz Plot analysis of B {yields} KKK decays.

  16. Decay Dynamics of Tumors

    PubMed Central

    2016-01-01

    The fractional cell kill is a mathematical expression describing the rate at which a certain population of cells is reduced to a fraction of itself. We investigate the mathematical function that governs the rate at which a solid tumor is lysed by a cell population of cytotoxic lymphocytes. We do it in the context of enzyme kinetics, using geometrical and analytical arguments. We derive the equations governing the decay of a tumor in the limit in which it is plainly surrounded by immune cells. A cellular automaton is used to test such decay, confirming its validity. Finally, we introduce a modification in the fractional cell kill so that the expected dynamics is attained in the mentioned limit. We also discuss the potential of this new function for non-solid and solid tumors which are infiltrated with lymphocytes. PMID:27310010

  17. Radioactive decay data tables

    SciTech Connect

    Kocher, D.C.

    1981-01-01

    The estimation of radiation dose to man from either external or internal exposure to radionuclides requires a knowledge of the energies and intensities of the atomic and nuclear radiations emitted during the radioactive decay process. The availability of evaluated decay data for the large number of radionuclides of interest is thus of fundamental importance for radiation dosimetry. This handbook contains a compilation of decay data for approximately 500 radionuclides. These data constitute an evaluated data file constructed for use in the radiological assessment activities of the Technology Assessments Section of the Health and Safety Research Division at Oak Ridge National Laboratory. The radionuclides selected for this handbook include those occurring naturally in the environment, those of potential importance in routine or accidental releases from the nuclear fuel cycle, those of current interest in nuclear medicine and fusion reactor technology, and some of those of interest to Committee 2 of the International Commission on Radiological Protection for the estimation of annual limits on intake via inhalation and ingestion for occupationally exposed individuals.

  18. RADIATIVE PENGUIN DECAYS FROM BABAR

    SciTech Connect

    Eigen, Gerald

    2003-08-28

    Electroweak penguin decays provide a promising hunting ground for Physics beyond the Standard Model (SM). The decay B {yields} X{sub s}{gamma}, which proceeds through an electromagnetic penguin loop, already provides stringent constraints on the supersymmetric (SUSY) parameter space. The present data samples of {approx}1 x 10{sup 8} B{bar B} events allow to explore radiative penguin decays with branching fractions of the order of 10{sup -6} or less. In this brief report they discuss a study of B {yields} K*{ell}{sup +}{ell}{sup -} decay modes and a search for B {yields} {rho}({omega}){gamma} decays.

  19. Charmless b decays at CDF

    SciTech Connect

    Donega, Mauro; /Geneva U.

    2005-07-01

    The authors report on the charmless B decays measurements performed on 180 pb{sup -1} of data collected with the CDF II detector at the Fermilab Tevatron collider. This paper describes: the first observation of the decay mode B{sub s} {yields} K{sup +}K{sup -} and the measurement of the direct Cp asymmetry in the ({bar B}){sub d} {yields} K{sup {+-}}{pi}{sup {-+}} decay; the first evidence of the decay mode B{sub s} {yields} {phi}{phi} and the branching ratio and Cp asymmetry for the B{sup {+-}} {yields} {phi}K{sup {+-}} decay.

  20. A thermostable metal-tolerant laccase with bioremediation potential from a marine-derived fungus.

    PubMed

    D'Souza-Ticlo, Donna; Sharma, Deepak; Raghukumar, Chandralata

    2009-01-01

    Laccase, an oxidoreductive enzyme, is important in bioremediation. Although marine fungi are potential sources of enzymes for industrial applications, they have been inadequately explored. The fungus MTCC 5159, isolated from decaying mangrove wood and identified as Cerrena unicolor based on the D1/D2 region of 28S and the 18S ribosomal DNA sequence, decolorized several synthetic dyes. Partially purified laccase reduced lignin content from sugarcane bagasse pulp by 36% within 24 h at 30 degrees C. Laccase was the major lignin-degrading enzyme (approximately 24,000 U L(-1)) produced when grown in low-nitrogen medium with half-strength seawater. Three laccases, Lac I, Lac II, and Lac III, of differing molecular masses were produced. Each of these, further resolved into four isozymes by anion exchange chromatography. The N-terminal amino acid sequence of the major isozyme, Lac IId showed 70-85% homology to laccases from basidiomycetes. It contained an N-linked glycan content of 17%. The optimum pH and temperature for Lac IId were 3 and 70 degrees C, respectively, the half-life at 70 degrees C being 90 min. The enzyme was most stable at pH 9 and retained >60% of its activity up to 180 min at 50 degrees C and 60 degrees C. The enzyme was not inhibited by Pb, Fe, Ni, Li, Co, and Cd at 1 mmol. This is the first report on the characterization of thermostable metal-tolerant laccase from a marine-derived fungus with a potential for industrial application. PMID:19283431

  1. [Isolation of wood-decaying fungi and evaluation of their enzymatic activity (Quindío, Colombia)].

    PubMed

    Chaparro, Deisy Fernanda; Rosas, Diana Carolina; Varela, Amanda

    2009-12-31

    White rot fungi (Ascomycota and Basidiomycota) were collected on fallen trunks with different decay stages, in a subandean forest (La Montaña del Ocaso nature reserve), and it was evaluated their ligninolitic activity. They were cultured on malt extract agar. Then it was performed semiquantitative tests for laccase and cellobiose dehydrogenase (CDH) activity using ABTS and DCPIP as enzymatic inducers. Based on the results of these tests, the fungi with higher activities from trunks with different decay stages were selected: Cookeina sulcipes (for stage 1), a fungus from the family Corticiaceae (for stage 2), Xylaria polymorpha (for stage 3) and Earliella sp. (for stage 4). A fermentation was performed at 28 degrees C, during 11 days, in a rotatory shaker at 150 rpm. Biomass, glucose, proteins and enzyme activities measurements were performed daily. The fungi that were in the trunks with decay states from 1 to 3, showed higher laccase activity as the state of decay increased. A higher DCH activity was also associated with a higher. Also, there was a positive relationship between both enzymes' activities. Erliella was the fungus which presented the highest biomass production (1140,19 g/l), laccase activity (157 UL(-1)) and CDH activity (43,50 UL(-1)). This work is the first report of laccase and CDH activity for Cookeina sulcipes and Earliella sp. Moreover, it gives basis for the use of these native fungi in biotechnological applications and the acknowledgment of their function in the wood decay process in native forest.

  2. [Isolation of wood-decaying fungi and evaluation of their enzymatic activity (Quindío, Colombia)].

    PubMed

    Chaparro, Deisy Fernanda; Rosas, Diana Carolina; Varela, Amanda

    2009-12-31

    White rot fungi (Ascomycota and Basidiomycota) were collected on fallen trunks with different decay stages, in a subandean forest (La Montaña del Ocaso nature reserve), and it was evaluated their ligninolitic activity. They were cultured on malt extract agar. Then it was performed semiquantitative tests for laccase and cellobiose dehydrogenase (CDH) activity using ABTS and DCPIP as enzymatic inducers. Based on the results of these tests, the fungi with higher activities from trunks with different decay stages were selected: Cookeina sulcipes (for stage 1), a fungus from the family Corticiaceae (for stage 2), Xylaria polymorpha (for stage 3) and Earliella sp. (for stage 4). A fermentation was performed at 28 degrees C, during 11 days, in a rotatory shaker at 150 rpm. Biomass, glucose, proteins and enzyme activities measurements were performed daily. The fungi that were in the trunks with decay states from 1 to 3, showed higher laccase activity as the state of decay increased. A higher DCH activity was also associated with a higher. Also, there was a positive relationship between both enzymes' activities. Erliella was the fungus which presented the highest biomass production (1140,19 g/l), laccase activity (157 UL(-1)) and CDH activity (43,50 UL(-1)). This work is the first report of laccase and CDH activity for Cookeina sulcipes and Earliella sp. Moreover, it gives basis for the use of these native fungi in biotechnological applications and the acknowledgment of their function in the wood decay process in native forest. PMID:19796977

  3. The soil fungus Chaetomium in the human paranasal sinuses.

    PubMed

    Aru, A; Munk-Nielsen, L; Federspiel, B H

    1997-01-01

    Chaetomium is a soil fungus of which more than 180 species are now known. Most species cause degradation of cellulose-rich substrates, such as components in soil, straw or wood. Growth of Chaetomium globosum is often stimulated in the presence of Aspergillus fumigatus, which excretes such compounds as sugar phosphates and phospho-glyceric acid. A 73-year-old woman, with long-standing pain and secretion from her left maxillary sinus, was admitted to hospital where an infundibulectomy was performed. Histological examination showed necrotic material with hyphae of A. fumigatus and perithecia of Chaetomium sp. The latter fungus is rarely pathogenic to man. PMID:9298672

  4. Roles of Peroxisomes in the Rice Blast Fungus

    PubMed Central

    Liu, Caiyun

    2016-01-01

    The rice blast fungus, Magnaporthe oryzae, is a model plant pathogenic fungus and is a severe threat to global rice production. Over the past two decades, it has been found that the peroxisomes play indispensable roles during M. oryzae infection. Given the importance of the peroxisomes for virulence, we review recent advances of the peroxisomes roles during M. oryzae infection processes. We firstly introduce the molecular mechanisms and life cycles of the peroxisomes. And then, metabolic functions related to the peroxisomes are also discussed. Finally, we provide an overview of the relationship between peroxisomes and pathogenicity. PMID:27610388

  5. A new cytosporone derivative from the endophytic fungus Cytospora sp.

    PubMed

    Takano, Tomoya; Koseki, Takuya; Koyama, Hiromasa; Shiono, Yoshihito

    2014-07-01

    Japanese oak wilt (JOW) is a tree disease caused by the fungus Raffaelea quercivora, which is vectored by the ambrosia beetle, Platypus quercivorus. In a screening study of the inhibitory active compounds from fungi, a new cytosporone analogue, compound 1, was isolated from the endophytic fungus Cytospora sp. TT-10 isolated from Japanese oak, together with the known compounds, integracin A (2), cytosporones N (3) and A (4). Their structures were determined by extensive 1D- and 2D-NMR spectroscopic and mass spectral analyses. Compound 1 was identified as 4,5-dihydroxy-3-heptylphthalide and named cytosporone E. Compounds 2 and 3 showed antimicrobial activity against Raffaelea quercivora. PMID:25230507

  6. Patterns of functional enzyme activity in fungus farming ambrosia beetles

    PubMed Central

    2012-01-01

    Introduction In wood-dwelling fungus-farming weevils, the so-called ambrosia beetles (Curculionidae: Scolytinae and Platypodinae), wood in the excavated tunnels is used as a medium for cultivating fungi by the combined action of digging larvae (which create more space for the fungi to grow) and of adults sowing and pruning the fungus. The beetles are obligately dependent on the fungus that provides essential vitamins, amino acids and sterols. However, to what extent microbial enzymes support fungus farming in ambrosia beetles is unknown. Here we measure (i) 13 plant cell-wall degrading enzymes in the fungus garden microbial consortium of the ambrosia beetle Xyleborinus saxesenii, including its primary fungal symbionts, in three compartments of laboratory maintained nests, at different time points after gallery foundation and (ii) four specific enzymes that may be either insect or microbially derived in X. saxesenii adult and larval individuals. Results We discovered that the activity of cellulases in ambrosia fungus gardens is relatively small compared to the activities of other cellulolytic enzymes. Enzyme activity in all compartments of the garden was mainly directed towards hemicellulose carbohydrates such as xylan, glucomannan and callose. Hemicellulolytic enzyme activity within the brood chamber increased with gallery age, whereas irrespective of the age of the gallery, the highest overall enzyme activity were detected in the gallery dump material expelled by the beetles. Interestingly endo-β-1,3(4)-glucanase activity capable of callose degradation was identified in whole-body extracts of both larvae and adult X. saxesenii, whereas endo-β-1,4-xylanase activity was exclusively detected in larvae. Conclusion Similar to closely related fungi associated with bark beetles in phloem, the microbial symbionts of ambrosia beetles hardly degrade cellulose. Instead, their enzyme activity is directed mainly towards comparatively more easily accessible hemicellulose

  7. Roles of Peroxisomes in the Rice Blast Fungus

    PubMed Central

    Liu, Caiyun

    2016-01-01

    The rice blast fungus, Magnaporthe oryzae, is a model plant pathogenic fungus and is a severe threat to global rice production. Over the past two decades, it has been found that the peroxisomes play indispensable roles during M. oryzae infection. Given the importance of the peroxisomes for virulence, we review recent advances of the peroxisomes roles during M. oryzae infection processes. We firstly introduce the molecular mechanisms and life cycles of the peroxisomes. And then, metabolic functions related to the peroxisomes are also discussed. Finally, we provide an overview of the relationship between peroxisomes and pathogenicity.

  8. Source of fungus contamination of hydrophilic soft contact lenses.

    PubMed

    Gasset, A R; Mattingly, T P; Hood, I

    1979-09-01

    Fungus infiltration within hydrophilic lenses has been a rare finding. This case report confirms previous findings that fungal contamination of hydrophilic contact lens is possible. The present report, to our knowledge, is the first demonstration of the association of fungus from contaminated cosmetics with hydrophilic contact lenses. It is important to be aware of the possibility of fungal invasion of hydrophilic lenses, as well as to be able to differentiate this from the more common harmless spot formation. On the basis of this study, good lid hygiene, strict adherence to the sterilization procedure, and discontinuance of any soft hydrophilic contact lenses with spot formation seems appropriate. PMID:556154

  9. Two New Cyclic Depsipeptides from the Endophytic Fungus Fusarium sp.

    PubMed

    Lv, Fang; Daletos, Georgios; Lin, Wenhan; Proksch, Peter

    2015-10-01

    Two new cyclic depsipeptides, W493 C (1) and D (2), along with two known derivatives W493 A (3) and B (4) were obtained from the endophytic fungus Fusarium sp. isolated from the Mangrove plant Ceriops tagal. The structures of the new compounds were determined on the basis of one- and two dimensional NMR and high-resolution mass spectroscopic data. The absolute configurations of the amino acid residues of 1 and 2 were confirmed by application of Marfey's method. W493 A (3) and B (4) exhibited moderate activity against the fungus Cladosporium cladosporiodes and weak antitumor activity against the human ovarian cancer cell line A2780. PMID:26669100

  10. Roles of Peroxisomes in the Rice Blast Fungus.

    PubMed

    Chen, Xiao-Lin; Wang, Zhao; Liu, Caiyun

    2016-01-01

    The rice blast fungus, Magnaporthe oryzae, is a model plant pathogenic fungus and is a severe threat to global rice production. Over the past two decades, it has been found that the peroxisomes play indispensable roles during M. oryzae infection. Given the importance of the peroxisomes for virulence, we review recent advances of the peroxisomes roles during M. oryzae infection processes. We firstly introduce the molecular mechanisms and life cycles of the peroxisomes. And then, metabolic functions related to the peroxisomes are also discussed. Finally, we provide an overview of the relationship between peroxisomes and pathogenicity. PMID:27610388

  11. Population genomics reveals that within-fungus polymorphism is common and maintained in populations of the mycorrhizal fungus Rhizophagus irregularis

    PubMed Central

    Wyss, Tania; Masclaux, Frédéric G; Rosikiewicz, Pawel; Pagni, Marco; Sanders, Ian R

    2016-01-01

    Arbuscular mycorrhizal (AM) fungi are symbionts of most plants, increasing plant growth and diversity. The model AM fungus Rhizophagus irregularis (isolate DAOM 197198) exhibits low within-fungus polymorphism. In contrast, another study reported high within-fungus variability. Experiments with other R. irregularis isolates suggest that within-fungus genetic variation can affect the fungal phenotype and plant growth, highlighting the biological importance of such variation. We investigated whether there is evidence of differing levels of within-fungus polymorphism in an R. irregularis population. We genotyped 20 isolates using restriction site-associated DNA sequencing and developed novel approaches for characterizing polymorphism among haploid nuclei. All isolates exhibited higher within-isolate poly-allelic single-nucleotide polymorphism (SNP) densities than DAOM 197198 in repeated and non-repeated sites mapped to the reference genome. Poly-allelic SNPs were independently confirmed. Allele frequencies within isolates deviated from diploids or tetraploids, or that expected for a strict dikaryote. Phylogeny based on poly-allelic sites was robust and mirrored the standard phylogeny. This indicates that within-fungus genetic variation is maintained in AM fungal populations. Our results predict a heterokaryotic state in the population, considerable differences in copy number variation among isolates and divergence among the copies, or aneuploidy in some isolates. The variation may be a combination of all of these hypotheses. Within-isolate genetic variation in R. irregularis leads to large differences in plant growth. Therefore, characterizing genomic variation within AM fungal populations is of major ecological importance. PMID:26953600

  12. Population genomics reveals that within-fungus polymorphism is common and maintained in populations of the mycorrhizal fungus Rhizophagus irregularis.

    PubMed

    Wyss, Tania; Masclaux, Frédéric G; Rosikiewicz, Pawel; Pagni, Marco; Sanders, Ian R

    2016-10-01

    Arbuscular mycorrhizal (AM) fungi are symbionts of most plants, increasing plant growth and diversity. The model AM fungus Rhizophagus irregularis (isolate DAOM 197198) exhibits low within-fungus polymorphism. In contrast, another study reported high within-fungus variability. Experiments with other R. irregularis isolates suggest that within-fungus genetic variation can affect the fungal phenotype and plant growth, highlighting the biological importance of such variation. We investigated whether there is evidence of differing levels of within-fungus polymorphism in an R. irregularis population. We genotyped 20 isolates using restriction site-associated DNA sequencing and developed novel approaches for characterizing polymorphism among haploid nuclei. All isolates exhibited higher within-isolate poly-allelic single-nucleotide polymorphism (SNP) densities than DAOM 197198 in repeated and non-repeated sites mapped to the reference genome. Poly-allelic SNPs were independently confirmed. Allele frequencies within isolates deviated from diploids or tetraploids, or that expected for a strict dikaryote. Phylogeny based on poly-allelic sites was robust and mirrored the standard phylogeny. This indicates that within-fungus genetic variation is maintained in AM fungal populations. Our results predict a heterokaryotic state in the population, considerable differences in copy number variation among isolates and divergence among the copies, or aneuploidy in some isolates. The variation may be a combination of all of these hypotheses. Within-isolate genetic variation in R. irregularis leads to large differences in plant growth. Therefore, characterizing genomic variation within AM fungal populations is of major ecological importance. PMID:26953600

  13. Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii.

    PubMed

    Floudas, Dimitrios; Held, Benjamin W; Riley, Robert; Nagy, Laszlo G; Koehler, Gage; Ransdell, Anthony S; Younus, Hina; Chow, Julianna; Chiniquy, Jennifer; Lipzen, Anna; Tritt, Andrew; Sun, Hui; Haridas, Sajeet; LaButti, Kurt; Ohm, Robin A; Kües, Ursula; Blanchette, Robert A; Grigoriev, Igor V; Minto, Robert E; Hibbett, David S

    2015-03-01

    Wood decay mechanisms in Agaricomycotina have been traditionally separated in two categories termed white and brown rot. Recently the accuracy of such a dichotomy has been questioned. Here, we present the genome sequences of the white-rot fungus Cylindrobasidium torrendii and the brown-rot fungus Fistulina hepatica both members of Agaricales, combining comparative genomics and wood decay experiments. C. torrendii is closely related to the white-rot root pathogen Armillaria mellea, while F. hepatica is related to Schizophyllum commune, which has been reported to cause white rot. Our results suggest that C. torrendii and S. commune are intermediate between white-rot and brown-rot fungi, but at the same time they show characteristics of decay that resembles soft rot. Both species cause weak wood decay and degrade all wood components but leave the middle lamella intact. Their gene content related to lignin degradation is reduced, similar to brown-rot fungi, but both have maintained a rich array of genes related to carbohydrate degradation, similar to white-rot fungi. These characteristics appear to have evolved from white-rot ancestors with stronger ligninolytic ability. F. hepatica shows characteristics of brown rot both in terms of wood decay genes found in its genome and the decay that it causes. However, genes related to cellulose degradation are still present, which is a plesiomorphic characteristic shared with its white-rot ancestors. Four wood degradation-related genes, homologs of which are frequently lost in brown-rot fungi, show signs of pseudogenization in the genome of F. hepatica. These results suggest that transition toward a brown-rot lifestyle could be an ongoing process in F. hepatica. Our results reinforce the idea that wood decay mechanisms are more diverse than initially thought and that the dichotomous separation of wood decay mechanisms in Agaricomycotina into white rot and brown rot should be revisited.

  14. Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii

    PubMed Central

    Floudas, Dimitrios; Held, Benjamin W.; Riley, Robert; Nagy, Laszlo G.; Koehler, Gage; Ransdell, Anthony S.; Younus, Hina; Chow, Julianna; Chiniquy, Jennifer; Lipzen, Anna; Tritt, Andrew; Sun, Hui; Haridas, Sajeet; LaButti, Kurt; Ohm, Robin A.; Kües, Ursula; Blanchette, Robert A.; Grigoriev, Igor V.; Minto, Robert E.; Hibbett, David S.

    2015-01-01

    Wood decay mechanisms in Agaricomycotina have been traditionally separated in two categories termed white and brown rot. Recently the accuracy of such a dichotomy has been questioned. Here, we present the genome sequences of the white rot fungus Cylindrobasidium torrendii and the brown rot fungus Fistulina hepatica both members of Agaricales, combining comparative genomics and wood decay experiments. Cylindrobasidium torrendii is closely related to the white-rot root pathogen Armillaria mellea, while F. hepatica is related to Schizophyllum commune, which has been reported to cause white rot. Our results suggest that C. torrendii and S. commune are intermediate between white-rot and brown-rot fungi, but at the same time they show characteristics of decay that resembles soft rot. Both species cause weak wood decay and degrade all wood components but leave the middle lamella intact. Their gene content related to lignin degradation is reduced, similar to brown-rot fungi, but both have maintained a rich array of genes related to carbohydrate degradation, similar to white-rot fungi. These characteristics appear to have evolved from white-rot ancestors with stronger ligninolytic ability. Fistulina hepatica shows characteristics of brown rot both in terms of wood decay genes found in its genome and the decay that it causes. However, genes related to cellulose degradation are still present, which is a plesiomorphic characteristic shared with its white-rot ancestors. Four wood degradation-related genes, homologs of which are frequently lost in brown-rot fungi, show signs of pseudogenization in the genome of F. hepatica. These results suggest that transition towards a brown rot lifestyle could be an ongoing process in F. hepatica. Our results reinforce the idea that wood decay mechanisms are more diverse than initially thought and that the dichotomous separation of wood decay mechanisms in Agaricomycotina into white rot and brown rot should be revisited. PMID:25683379

  15. The plant cell wall decomposing machinery underlies the functional diversity of forest fungi

    SciTech Connect

    Eastwood, Daniel C.; Floudas, Dimitrios; Binder, Manfred; Majcherczyk, Andrzej; Schneider, Patrick; Aerts, Andrea; Asiegbu, Fred O.; Baker, Scott E.; Barry, Kerrie; Bendiksby, Mika; Blumentritt, Melanie; Coutinho, Pedro M.; Cullen, Dan; Vries, Ronald P. de; Gathman, Allen; Goodell, Barry; Henrissat, Bernard; Ihrmark, Katarina; Kauserud, Hä; vard,; Kohler, Annegret; LaButti, Kurt; Lapidus, Alla; Lavin, José; L.; Lee, Yong-Hwan; Lindquist, Erika; Lilly, Walt; Lucas, Susan; Morin, Emmanuelle; Murat, Claude; Oguiza, José; A.; Park, Jongsun; Pisabarro, Antonio G.; Riley, Robert; Rosling, Anna; Salamov, Asaf; Schmidt, Olaf; Schmutz, Jeremy; Skrede, Inger; Stenlid, Jan; Wiebenga, Ad; Xie, Xinfeng; Kü; es, Ursula; Hibbett, David S.; Hoffmeister, Dirk; Hö; gberg, Nils; Martin, Francis; Grigoriev, Igor V.; Watkinson, Sarah C.

    2011-05-01

    Brown rot decay removes cellulose and hemicellulose from wood?residual lignin contributing up to 30percent of forest soil carbon?and is derived from an ancestral white rot saprotrophy in which both lignin and cellulose are decomposed. Comparative and functional genomics of the ?dry rot? fungus Serpula lacrymans, derived from forest ancestors, demonstrated that the evolution of both ectomycorrhizal biotrophy and brown rot saprotrophy were accompanied by reductions and losses in specific protein families, suggesting adaptation to an intercellular interaction with plant tissue. Transcriptome and proteome analysis also identified differences in wood decomposition in S. lacrymans relative to the brown rot Postia placenta. Furthermore, fungal nutritional mode diversification suggests that the boreal forest biome originated via genetic coevolution of above- and below-ground biota

  16. E6 Gamma Decay

    SciTech Connect

    Brown, B. Alex; Rae, W. D. M.

    2011-05-06

    Rare electric hexacontatetrapole (E6) transitions are studied in the full (f{sub 7/2},f{sub 5/2},p{sub 3/2},p{sub 1/2}) shell-model basis. Comparison of theory to the results from the gamma decay in {sup 53}Fe and from inelastic electron scattering on {sup 52}Cr provides unique and interesting tests of the valence wavefunctions, the models used for energy density functionals and into the origin of effective charge.

  17. The observation of decay

    NASA Astrophysics Data System (ADS)

    Sudbery, A.

    1984-10-01

    It is argued that the usual formulation of quantum mechanics does not satisfactorily describe physical change: the standard formula for a transition probability does not follow from the postulates. Instead, these yield the paradox that a watched pot never bolls (sometimes called "Zeno's paradox"). The paradox is reviewed and the possibility of avoiding it is discussed. A simple model of a decaying system is analysed; the system is then considered in continuous interaction with an apparatus designed to observe the time development of the system. In the light of this analysis, the possibility is considered of replacing the usual (diserete) projection postulate by a continuous projection postulate.

  18. Rare B Decays

    SciTech Connect

    Jackson, P.D.; /Victoria U.

    2006-02-24

    Recent results from Belle and BaBar on rare B decays involving flavor-changing neutral currents or purely leptonic final states are presented. Measurements of the CP asymmetries in B {yields} K*{gamma} and b {yields} s{gamma} are reported. Also reported are updated limits on B{sup +} {yields} K{sup +}{nu}{bar {nu}}, B{sup +} {yields} {tau}{sup +}{nu}, B{sup +} {yields} {mu}{sup +}{nu} and the recent measurement of B {yields} X{sub s}{ell}{sup +}{ell}{sup -}.

  19. Rare decays and CP asymmetries in charged B decays

    SciTech Connect

    Deshpande, N.G.

    1991-01-01

    The theory of loop induced rare decays and the rate asymmetry due to CP violation in charged B Decays in reviewed. After considering b {yields} s{gamma} and b {yields} se{sup +}e{sup {minus}} decays, the asymmetries for pure penguin process are estimated first. A larger asymmetry can result in those modes where a tree diagram and a penguin diagram interfere, however these estimates are necessarily model dependent. Estimates of Cabbibo suppressed penguins are also considered.

  20. Volatile antimicrobials from Muscodor crispans, a novel endophytic fungus.

    PubMed

    Mitchell, Angela M; Strobel, Gary A; Moore, Emily; Robison, Richard; Sears, Joe

    2010-01-01

    Muscodor crispans is a recently described novel endophytic fungus of Ananas ananassoides (wild pineapple) growing in the Bolivian Amazon Basin. The fungus produces a mixture of volatile organic compounds (VOCs); some of the major components of this mixture, as determined by GC/MS, are propanoic acid, 2-methyl-, methyl ester; propanoic acid, 2-methyl-; 1-butanol, 3-methyl-;1-butanol, 3-methyl-, acetate; propanoic acid, 2-methyl-, 2-methylbutyl ester; and ethanol. The fungus does not, however, produce naphthalene or azulene derivatives as has been observed with many other members of the genus Muscodor. The mixture of VOCs produced by M. crispans cultures possesses antibiotic properties, as does an artificial mixture of a majority of the components. The VOCs of the fungus are effective against a wide range of plant pathogens, including the fungi Pythium ultimum, Phytophthora cinnamomi, Sclerotinia sclerotiorum and Mycosphaerella fijiensis (the black sigatoka pathogen of bananas), and the serious bacterial pathogen of citrus, Xanthomonas axonopodis pv. citri. In addition, the VOCs of M. crispans killed several human pathogens, including Yersinia pestis, Mycobacterium tuberculosis and Staphylococcus aureus. Artificial mixtures of the fungal VOCs were both inhibitory and lethal to a number of human and plant pathogens, including three drug-resistant strains of Mycobacterium tuberculosis. The gaseous products of Muscodor crispans potentially could prove to be beneficial in the fields of medicine, agriculture, and industry.

  1. Controlling fungus on channel catfish eggs with peracetic acid

    Technology Transfer Automated Retrieval System (TEKTRAN)

    There is much interest in the use of peracetic acid (PAA) to treat pathogens in aquaculture. It is a relatively new compound and is approved for use in Europe, but not in the United States. This study determined the effectiveness of PAA for fungus control on channel catfish Ictalurus punctatus egg...

  2. Fun Microbiology: How To Measure Growth of a Fungus.

    ERIC Educational Resources Information Center

    Mitchell, James K.; And Others

    1997-01-01

    Describes an experiment to demonstrate a simple method for measuring fungus growth by monitoring the effect of temperature on the growth of Trichoderma viride. Among the advantages that this experimental model provides is introducing students to the importance of using the computer as a scientific tool for analyzing and presenting data. (AIM)

  3. [Sphenoid sinusitis with intracranial extension produced by an emergent fungus].

    PubMed

    Escamilla Carpintero, Yolanda; Espasa Soley, Mateu; Bella Cueto, M Rosa; Prenafeta Moreno, Mario

    2011-01-01

    This is a case of fungal sphenoid sinusitis in a diabetic patient with non-specific symptoms and bone erosion radiological findings in the superior and posterior sphenoid walls. Surgical treatment was performed by transnasal endoscopic approach and voriconazole orally thereafter. The histopathological study found fungus hyphal without mucosa invasion and the molecular study determined DNA to be Phialemonium curvatum, an unusual pathogen.

  4. Draft Genome Sequence of the Fungus Trametes hirsuta 072

    PubMed Central

    Tyazhelova, Tatiana V.; Moiseenko, Konstantin V.; Vasina, Daria V.; Mosunova, Olga V.; Fedorova, Tatiana V.; Maloshenok, Lilya G.; Landesman, Elena O.; Bruskin, Sergei A.; Psurtseva, Nadezhda V.; Slesarev, Alexei I.; Kozyavkin, Sergei A.; Koroleva, Olga V.

    2015-01-01

    A standard draft genome sequence of the white rot saprotrophic fungus Trametes hirsuta 072 (Basidiomycota, Polyporales) is presented. The genome sequence contains about 33.6 Mb assembled in 141 scaffolds with a G+C content of ~57.6%. The draft genome annotation predicts 14,598 putative protein-coding open reading frames (ORFs). PMID:26586872

  5. OXIDATION OF PERSISTANT ENVIRONMENTAL POLLUTANTS BY A WHITE ROT FUNGUS

    EPA Science Inventory

    The white rot fungus Phanerochaete chrysosporium degraded DDT [1,1,-bis(4-chlorophenyl)-2,2,2-trichloroethane], 3,4,3',4'-tetrachlorobiphenyl, 2,4,5,2',-4',5'-hexachlorobiphenyl, 2,3,7,8-tetrachlorodibenzo-p-dioxin, lindane (1,2,3,4,5,6-hexachlorocylohexane), and benzo[a]pyrene t...

  6. A Brazilian social bee must cultivate fungus to survive.

    PubMed

    Menezes, Cristiano; Vollet-Neto, Ayrton; Marsaioli, Anita Jocelyne; Zampieri, Davila; Fontoura, Isabela Cardoso; Luchessi, Augusto Ducati; Imperatriz-Fonseca, Vera Lucia

    2015-11-01

    The nests of social insects provide suitable microenvironments for many microorganisms as they offer stable environmental conditions and a rich source of food [1-4]. Microorganisms in turn may provide several benefits to their hosts, such as nutrients and protection against pathogens [1, 4-6]. Several examples of symbiosis between social insects and microorganisms have been found in ants and termites. These symbioses have driven the evolution of complex behaviors and nest structures associated with the culturing of the symbiotic microorganisms [5, 7, 8]. However, while much is known about these relationships in many species of ants and termites, symbiotic relationships between microorganisms and social bees have been poorly explored [3, 4, 9, 10]. Here, we report the first case of an obligatory relationship between the Brazilian stingless bee Scaptotrigona depilis and a fungus of the genus Monascus (Ascomycotina). Fungal mycelia growing on the provisioned food inside the brood cell are eaten by the larva. Larvae reared in vitro on sterilized larval food supplemented with fungal mycelia had a much higher survival rate (76%) compared to larvae reared under identical conditions but without fungal mycelia (8% survival). The fungus was found to originate from the material from which the brood cells are made. Since the bees recycle and transport this material between nests, fungus would be transferred to newly built cells and also to newly founded nests. This is the first report of a fungus cultivation mutualism in a social bee. PMID:26592344

  7. Two new steroids from sclerotia of the fungus Omphalia lapidescens.

    PubMed

    Yan, He; Rong, Xu; Chen, Pi-Ting; Zhang, Xing; Ma, Zhi-Qing

    2014-01-01

    Two new steroids, leiwansterols A and B, along with three known ones (3-5), were isolated from the sclerotia of the fungus Omphalia lapidescen. Their structures were elucidated on the basis of spectral data. The isolated compounds showed weak anti-tobacco mosaic virus activity. PMID:24392639

  8. Wood decay at sea

    NASA Astrophysics Data System (ADS)

    Charles, François; Coston-Guarini, Jennifer; Guarini, Jean-Marc; Fanfard, Sandrine

    2016-08-01

    The oceans and seas receive coarse woody debris since the Devonian, but the kinetics of wood degradation remains one of many unanswered questions about the fate of driftwood in the marine environment. A simple gravimetric experiment was carried out at a monitoring station located at the exit of a steep, forested Mediterranean watershed in the Eastern Pyrenees. The objective was to describe and quantify, with standardized logs (in shape, structure and constitution), natural degradation of wood in the sea. Results show that the mass decrease of wood logs over time can be described by a sigmoidal curve. The primary process of wood decay observed at the monitoring station was due to the arrival and installation of wood-boring species that consumed more than half of the total wood mass in six months. Surprisingly, in a region where there is little remaining wood marine infrastructure, "shipworms", i.e. xylophagous bivalves, are responsible for an important part of this wood decay. This suggests that these communities are maintained probably by a frequent supply of a large quantity of riparian wood entering the marine environment adjacent to the watershed. By exploring this direct link between terrestrial and marine ecosystems, our long term objective is to determine how these supplies of terrestrial organic carbon can sustain wood-based marine communities as it is observed in the Mediterranean Sea.

  9. Soudan nucleon decay program

    SciTech Connect

    Ayres, D.S.

    1981-01-01

    The Soudan nucleon decay program is being carried out in the Soudan iron mine in northeastern Minnesota, at a depth of 2000 m of water equivalent. A 30-ton prototype experiment, Soudan 1, has been built and is now being operated by a University of Minnesota - Argonne National Laboratory collaboration. The detector is a block of iron-loaded concrete instrumented with 3456 gas proportional tubes. It can detect nucleon decay at the 2 x 10/sup 30/ year level, and will measure cosmic-ray induced backgrounds. Soudan 1 is also obtaining data on very high energy cosmic-ray interactions. Monte-Carlo predictions of performance have been checked by calibration of a detector module in a charged-particle test beam. A proposal to build a 1000-ton experiment, Soudan 2, has been submitted to funding agencies in the USA and the UK by a Minnesota - Argonne - Oxford University collaboration. The proposed detector utilizes drift chambers with 50-cm drifts to obtain very fine-grained ionization and tracking information at low cost. This tracking-calorimeter detector has a fiducial mass of 650 tons, and could be operating in 1985. A drifting scheme utilizing 50 cm x 5 m x 1 cm planar chambers has been shown feasible, and prototypes of alternate drifting structures are also being studied. A plan to provide expandability to an eventual 5000 tons has been developed.

  10. New Fungus-Insect Symbiosis: Culturing, Molecular, and Histological Methods Determine Saprophytic Polyporales Mutualists of Ambrosiodmus Ambrosia Beetles.

    PubMed

    Li, You; You, Li; Simmons, David Rabern; Bateman, Craig C; Short, Dylan P G; Kasson, Matthew T; Rabaglia, Robert J; Hulcr, Jiri

    2015-01-01

    Ambrosia symbiosis is an obligate, farming-like mutualism between wood-boring beetles and fungi. It evolved at least 11 times and includes many notorious invasive pests. All ambrosia beetles studied to date cultivate ascomycotan fungi: early colonizers of recently killed trees with poor wood digestion. Beetles in the widespread genus Ambrosiodmus, however, colonize decayed wood. We characterized the mycosymbionts of three Ambrosiodmus species using quantitative culturing, high-throughput metabarcoding, and histology. We determined the fungi to be within the Polyporales, closely related to Flavodon flavus. Culture-independent sequencing of Ambrosiodmus minor mycangia revealed a single operational taxonomic unit identical to the sequences from the cultured Flavodon. Histological sectioning confirmed that Ambrosiodmus possessed preoral mycangia containing dimitic hyphae similar to cultured F. cf. flavus. The Ambrosiodmus-Flavodon symbiosis is unique in several aspects: it is the first reported association between an ambrosia beetle and a basidiomycotan fungus; the mycosymbiont grows as hyphae in the mycangia, not as budding pseudo-mycelium; and the mycosymbiont is a white-rot saprophyte rather than an early colonizer: a previously undocumented wood borer niche. Few fungi are capable of turning rotten wood into complete animal nutrition. Several thousand beetle-fungus symbioses remain unstudied and promise unknown and unexpected mycological diversity and enzymatic innovations. PMID:26367271

  11. New Fungus-Insect Symbiosis: Culturing, Molecular, and Histological Methods Determine Saprophytic Polyporales Mutualists of Ambrosiodmus Ambrosia Beetles

    PubMed Central

    Bateman, Craig C.; Short, Dylan P. G.; Kasson, Matthew T.; Rabaglia, Robert J.; Hulcr, Jiri

    2015-01-01

    Ambrosia symbiosis is an obligate, farming-like mutualism between wood-boring beetles and fungi. It evolved at least 11 times and includes many notorious invasive pests. All ambrosia beetles studied to date cultivate ascomycotan fungi: early colonizers of recently killed trees with poor wood digestion. Beetles in the widespread genus Ambrosiodmus, however, colonize decayed wood. We characterized the mycosymbionts of three Ambrosiodmus species using quantitative culturing, high-throughput metabarcoding, and histology. We determined the fungi to be within the Polyporales, closely related to Flavodon flavus. Culture-independent sequencing of Ambrosiodmus minor mycangia revealed a single operational taxonomic unit identical to the sequences from the cultured Flavodon. Histological sectioning confirmed that Ambrosiodmus possessed preoral mycangia containing dimitic hyphae similar to cultured F. cf. flavus. The Ambrosiodmus-Flavodon symbiosis is unique in several aspects: it is the first reported association between an ambrosia beetle and a basidiomycotan fungus; the mycosymbiont grows as hyphae in the mycangia, not as budding pseudo-mycelium; and the mycosymbiont is a white-rot saprophyte rather than an early colonizer: a previously undocumented wood borer niche. Few fungi are capable of turning rotten wood into complete animal nutrition. Several thousand beetle-fungus symbioses remain unstudied and promise unknown and unexpected mycological diversity and enzymatic innovations. PMID:26367271

  12. Alpha decay in electron surrounding

    SciTech Connect

    Igashov, S. Yu.; Tchuvil’sky, Yu. M.

    2013-12-15

    The influence of atomic electron shells on the constant of alpha decay of heavy and mediummass nuclei was considered in detail. A method for simultaneously taking into account the change in the potential-barrier shape and the effect of reflection of a diverging Coulomb wave in the classically allowed region was developed. The ratios of decay probabilities per unit time for a bare nucleus and the respective neutral atom were found for some alpha-decaying isotopes.

  13. Review of semileptonic charm decays

    SciTech Connect

    Potter, D.M.

    1991-01-01

    The experimental status of D{sup 0} and D{sup +} semileptonic decays is reviewed and compared to model predictions. Topics covered are the form factor pole mass and decay rate for D {yields} Klv, the decay rate and form factor ratios for D {yields} K*lv, and, finally, the issue of modes other than Klv and K*lv. 4 refs., 5 tabs.

  14. Beta decay of polarized neutrons

    SciTech Connect

    Bopp, P.; Dubbers, D.; Hornig, L.; Klemt, E.; Last, J.; Schuetze, H.; Freedman, S.J.; Schaerpf, O.

    1985-01-15

    Beta decay of polarized neutrons has been studied with the superconductive spectrometer PERKEO at the Institut Laue-Langevin. The energy spectrum of the ..beta..-decay asymmetry has been measured for the first time; from the absolute value of the asymmetry we obtain a new value for the ratio of weak coupling constants g/sub A//g/sub V/, which is compared to similar data from hyperon decays. The measurement of further weak interaction parameters from neutron decay is in progress.

  15. Rare B Decays at Babar

    SciTech Connect

    Palombo, Fernando; Collaboration, for the BABAR

    2009-01-12

    The author presents some of the most recent BABAR measurements for rare B decays. These include rate asymmetries in the B decays to K{sup (*)}l{sup +}l{sup -} and K{sup +}{pi}{sup -} and branching fractions in the B decays to l{sup +}{nu}{sub l}, K{sub 1}(1270){sup +}{pi}{sup -} and K{sub 1}(1400){sup +}{pi}{sup -}. The author also reports a search for the B{sup +} decay to K{sub S}{sup 0}K{sub S}{sup 0}{pi}{sup +}.

  16. An enigmatic fossil fungus from the 410 Ma Rhynie chert that resembles Macrochytrium (Chytridiomycota) and Blastocladiella (Blastocladiomycota).

    PubMed

    Krings, Michael; Taylor, Thomas N; Martin, Helmut

    2016-01-01

    Litter layers in the Lower Devonian (~ 410 Ma) Rhynie chert were inhabited by a wide variety of saprotrophic fungi, however, only a few of these organisms have been described formally. A new microfungus, Trewinomyces annulifer gen. et sp. nov., occurs as tufts on decaying land plant axes from the Rhynie chert. The fungus consists of an intramatrical rhizoidal system and an erect extramatrical hypha (stalk) that bears a single, terminal sporangium. One or two successive rings often are present in the stalk immediately below the sporangium base. Overall morphology of T. annulifer resembles the extant genera Macrochytrium (Chytridiomycota) and Blastocladiella (Blastocladiomycota). However, the rhizoids are septate or pseudoseptate, a feature not known in extant zoosporic fungi, and thus render the systematic affinities of T. annulifer unresolved. Trewinomyces annulifer offers a rare view of the morphology of a distinctive Early Devonian saprotrophic microfungus. PMID:26740543

  17. Decay of oscillating universes

    NASA Astrophysics Data System (ADS)

    Mithani, Audrey Todhunter

    It has been suggested by Ellis et al that the universe could be eternal in the past, without beginning. In their model, the "emergent universe'' exists forever in the past, in an "eternal'' phase before inflation begins. We will show that in general, such an "eternal'' phase is not possible, because of an instability due to quantum tunneling. One candidate model, the "simple harmonic universe'' has been shown by Graham et al to be perturbatively stable; we find that it is unstable with respect to quantum tunneling. We also investigate the stability of a distinct oscillating model in loop quantum cosmology with respect to small perturbations and to quantum collapse. We find that the model has perturbatively stable and unstable solutions, with both types of solutions occupying significant regions of the parameter space. All solutions are unstable with respect to collapse by quantum tunneling to zero size. In addition, we investigate the effect of vacuum corrections, due to the trace anomaly and the Casimir effect, on the stability of an oscillating universe with respect to decay by tunneling to the singularity. We find that these corrections do not generally stabilize an oscillating universe. Finally, we determine the decay rate of the oscillating universe. Although the wave function of the universe lacks explicit time dependence in canonical quantum cosmology, time evolution may be present implicitly through the semiclassical superspace variables, which themselves depend on time in classical dynamics. Here, we apply this approach to the simple harmonic universe, by extending the model to include a massless, minimally coupled scalar field φ which has little effect on the dynamics but can play the role of a "clock''.

  18. Penicillium solitum produces a polygalacturonase isozyme in decayed Anjou pear fruit capable of macerating host tissue in vitro.

    PubMed

    Jurick, Wayne M; Vico, Ivana; Gaskins, Verneta L; Whitaker, Bruce D; Garrett, Wesley M; Janisiewicz, Wojciech J; Conway, William S

    2012-01-01

    A polygalacturonase (PG) isozyme was isolated from Penicillium solitum-decayed Anjou pear fruit and purified to homogeneity with a multistep process. Both gel filtration and cation exchange chromatography revealed a single PG activity peak, and analysis of the purified protein showed a single band with a molecular mass of 43 kDa, which is of fungal origin. The purified enzyme was active from pH 3.5-6, with an optimum at pH 4.5. PG activity was detectable 0-70 C with 50 C maximum. The purified isozyme was inhibited by the divalent cations Ca(2+), Mg(2+), Mn(2+) and Fe(2+) and analysis of enzymatic hydrolysis products revealed polygalacturonic acid monomers and oligomers. The purified enzyme has an isoelectric point of 5.3 and is not associated with a glycosylated protein. The PG isozyme macerated fruit tissue plugs in vitro and produced ~1.2-fold more soluble polyuronides from pear than from apple tissue, which further substantiates the role of PG in postharvest decay. Data from this study show for the first time that the purified PG produced in decayed Anjou pear by P. solitum, a weakly virulent fungus, is different from that PG produced by the same fungus in decayed apple.

  19. Counterflow driven by swirl decay

    NASA Astrophysics Data System (ADS)

    Shtern, Vladimir N.; Borissov, Anatoli A.

    2010-06-01

    The global meridional circulation of a viscous fluid, caused by swirl decay in a cylindrical container, is studied. To this end, a new solution to the Navier-Stokes equations is obtained, and simple experiments are performed to verify the predictions of the theory. The swirl decay mechanism explains elongated counterflows in hydrocyclones and vortex tubes sometimes extending over a hundred diameters.

  20. Status of rare decay experiments

    SciTech Connect

    Littenberg, L.S.

    1984-01-01

    Some results are given for rare muon decay experiments currently running. Also, plans are discussed for rare kaon decay experiments. Some of the events sought come from processes which violate lepton flavor conservation. Several apparatuses used in the search are described. 35 references. (LEW)

  1. Particle decay in inflationary cosmology

    SciTech Connect

    Boyanovsky, D.; Vega, H.J. de

    2004-09-15

    We investigate the relaxation and decay of a particle during inflation by implementing the dynamical renormalization group. This investigation allows us to give a meaningful definition for the decay rate in an expanding universe. As a prelude to a more general scenario, the method is applied here to study the decay of a particle in de Sitter inflation via a trilinear coupling to massless conformally coupled particles, both for wavelengths much larger and much smaller than the Hubble radius. For superhorizon modes we find that the decay is of the form {eta}{sup {gamma}{sub 1}} with {eta} being conformal time and we give an explicit expression for {gamma}{sub 1} to leading order in the coupling which has a noteworthy interpretation in terms of the Hawking temperature of de Sitter space-time. We show that if the mass M of the decaying field is <decay rate during inflation is enhanced over the Minkowski space-time result by a factor 2H/{pi}M. For wavelengths much smaller than the Hubble radius we find that the decay law is e with C({eta}) the scale factor and {alpha} determined by the strength of the trilinear coupling. In all cases we find a substantial enhancement in the decay law as compared to Minkowski space-time. These results suggest potential implications for the spectrum of scalar density fluctuations as well as non-Gaussianities.

  2. Kretzschmaria quercicola sp. nov., an Undescribed Fungus from Living Oak in Mt. Daeryong, Korea

    PubMed Central

    Yun, Ji Ho; Jo, Jong Won; Lee, Jin Heung; Han, Sang Kuk

    2016-01-01

    We encountered an unfamiliar ascomycete fruiting body, fitting characteristics of the genus Kretzschmaria, which features in a stipitate ascigerous stroma with carbonaceous interior and disintegrating perithecia. In this study, we report and characterize a new species of the decaying fungus. Compared to other species, one of the notable features of this specimen (TPML150908-046) is its stromatal size (up to 15 cm). Although TPML150908-046 is morphologically similar to K. milleri and K. sandvicensis, it differs sharply from both species in apical ring size (TPML150908-046, 6.5~10.5 µm; K. milleri, 11~16 µm) and ascospore width (TPML150908-046, 10.5~17 µm; K. sandvicensis, 8.5~11.5 µm). Phylogenetic trees based on β-tubulin, ITS, and RPB2 sequences showed that our collection clustered with K. sandvicensis, with the respective similarities for these sequences being 95.6%, 91.3%, and 97.7%, signifying it as another species. With these results, we report it as a new species, which we call Kretzschmaria quercicola sp. nov. PMID:27433122

  3. Production and Partial Characterization of an Alkaline Xylanase from a Novel Fungus Cladosporium oxysporum.

    PubMed

    Guan, Guo-Qiang; Zhao, Peng-Xiang; Zhao, Jin; Wang, Mei-Juan; Huo, Shu-Hao; Cui, Feng-Jie; Jiang, Jian-Xin

    2016-01-01

    A new fungus Cladosporium oxysporum GQ-3 producing extracellular xylanase was isolated from decaying agricultural waste and identified based on the morphology and comparison of internal transcribed spacer (ITS) rDNA gene sequence. C. oxysporum produced maximum xylanase activity of 55.92 U/mL with wheat bran as a substrate and NH4Cl as a nitrogen source. Mg(2+) improved C. oxysporum xylanase production. Partially purified xylanase exhibited maximum activity at 50°C and pH 8.0, respectively, and showed the stable activity after 2-h treatment in pH 7.0-8.5 or below 55°C. Mg(2+) enhanced the xylanase activity by 2% while Cu(2+) had the highest inhibition ratio of 57.9%. Furthermore, C. oxysporum xylanase was resistant to most of tested neutral and alkaline proteases. Our findings indicated that Cladosporium oxysporum GQ-3 was a novel xylanase producer, which could be used in the textile processes or paper/feed industries. PMID:27213150

  4. Production and Partial Characterization of an Alkaline Xylanase from a Novel Fungus Cladosporium oxysporum

    PubMed Central

    Guan, Guo-Qiang; Zhao, Peng-Xiang; Zhao, Jin; Wang, Mei-Juan; Huo, Shu-Hao; Cui, Feng-Jie; Jiang, Jian-Xin

    2016-01-01

    A new fungus Cladosporium oxysporum GQ-3 producing extracellular xylanase was isolated from decaying agricultural waste and identified based on the morphology and comparison of internal transcribed spacer (ITS) rDNA gene sequence. C. oxysporum produced maximum xylanase activity of 55.92 U/mL with wheat bran as a substrate and NH4Cl as a nitrogen source. Mg2+ improved C. oxysporum xylanase production. Partially purified xylanase exhibited maximum activity at 50°C and pH 8.0, respectively, and showed the stable activity after 2-h treatment in pH 7.0–8.5 or below 55°C. Mg2+ enhanced the xylanase activity by 2% while Cu2+ had the highest inhibition ratio of 57.9%. Furthermore, C. oxysporum xylanase was resistant to most of tested neutral and alkaline proteases. Our findings indicated that Cladosporium oxysporum GQ-3 was a novel xylanase producer, which could be used in the textile processes or paper/feed industries. PMID:27213150

  5. Top decays in extended models

    SciTech Connect

    Gaitan, R.; Miranda, O. G.; Cabral-Rosetti, L. G.

    2009-04-20

    Top quark decays are interesting as a mean to test the Standard Model (SM) predictions. The Cabbibo-Kobayashi-Maskawa (CKM)-suppressed process t{yields}cWW, and the rare decays t{yields}cZ, t{yields}H{sup 0}+c, and t{yields}c{gamma} an excellent window to probe the predictions of theories beyond the SM. We evaluate the flavor changing neutral currents (FCNC) decay t{yields}H{sup 0}+c in the context of Alternative Left-Right symmetric Models (ALRM) with extra isosinglet heavy fermions; the FCNC decays may place at tree level and are only supressed by the mixing between ordinary top and charm quarks. We also comment on the decay process t{yields}c+{gamma}, which involves radiative corrections.

  6. Spectral decomposition of phosphorescence decays.

    PubMed

    Fuhrmann, N; Brübach, J; Dreizler, A

    2013-11-01

    In phosphor thermometry, the fitting of decay curves is a key task in the robust and precise determination of temperatures. These decays are generally assumed to be mono-exponential in certain temporal boundaries, where fitting is performed. The present study suggests a multi-exponential method to determine the spectral distribution in terms of decay times in order to analyze phosphorescence decays and thereby complement the mono-exponential analysis. Therefore, two methods of choice are compared and verified using simulated data in the presence of noise. Addtionally, this spectral decomposition is applied to the thermographic phosphor Mg4FGeO6 : Mn and reveals changes in the exponential distributions of decay times upon a change of the excitation laser energy.

  7. Fine structure of cluster decays

    SciTech Connect

    Dumitrescu, O.

    1994-03-01

    Within the one level {ital R}-matrix approach, expressions are derived for the hindrance factors of cluster radioactive decays in which {ital y} {ital the} {ital shell} {ital model} {ital with} {ital effective} {ital residual} {ital interactions} [{ital e}.{ital g}.,{ital thelar} in the Michigan State University version for nearly spherical nuclei, or the enlarged superfluid model (ESM) recently proposed for deformed nuclei]. The exterior wave functions are calculated from a cluster-nucleus double-folding model potential obtained with the M3Y interaction. As examples of the cluster decay fine structure we analyzed the particular cases of {alpha} decay of {sup 241}Am and {sup 243}Cm, {sup 14}C decay of {sup 223}Ra, and {sup 34}Si decay of {sup 243}Cm. Good agreement with the experimental data is obtained.

  8. Engineering a filamentous fungus for L-rhamnose extraction.

    PubMed

    Kuivanen, Joosu; Richard, Peter

    2016-03-01

    L-Rhamnose is a high value rare sugar that is used as such or after chemical conversions. It is enriched in several biomass fractions such as the pectic polysaccharides rhamnogalacturonan I and II and in naringin, hesperidin, rutin, quercitrin and ulvan. We engineered the filamentous fungus Aspergillus niger to not consume L-rhamnose, while it is still able to produce the enzymes for the hydrolysis of L-rhamnose rich biomass. As a result we present a strain that can be used for the extraction of L-rhamnose in a consolidated process. In the process the biomass is hydrolysed to the monomeric sugars which are consumed by the fungus leaving the L-rhamnose. PMID:27033543

  9. Functional genome of the human pathogenic fungus Paracoccidioides brasiliensis.

    PubMed

    Felipe, Maria Sueli S; Torres, Fernando A G; Maranhão, Andrea Q; Silva-Pereira, Ildinete; Poças-Fonseca, Marcio J; Campos, Elida G; Moraes, Lídia M P; Arraes, Fabrício B M; Carvalho, Maria José A; Andrade, Rosângela V; Nicola, André M; Teixeira, Marcus M; Jesuíno, Rosália S A; Pereira, Maristela; Soares, Célia M A; Brígido, Marcelo M

    2005-09-01

    Paracoccidioides brasiliensis is a dimorphic and thermo-regulated fungus which is the causative agent of paracoccidioidomycosis, an endemic disease widespread in Latin America. Pathogenicity is assumed to be a consequence of the cellular differentiation process that this fungus undergoes from mycelium to yeast cells during human infection. In an effort to elucidate the molecular mechanisms involved in this process a network of Brazilian laboratories carried out a transcriptome project for both cell types. This review focuses on the data analysis yielding a comprehensive view of the fungal metabolism and the molecular adaptations during dimorphism in P. brasiliensis from analysis of 6022 groups, related to expressed genes, which were generated from both mycelium and yeast phases.

  10. White-nose syndrome fungus (Geomyces destructans) in bats, Europe

    USGS Publications Warehouse

    Wibbelt, G.; Kurth, A.; Hellmann, D.; Weishaar, M.; Barlow, A.; Veith, M.; Pruger, J.; Gorfol, T.; Grosche, T.; Bontadina, F.; Zophel, U.; Seidl, Hans-Peter; Cryan, P.M.; Blehert, D.S.

    2010-01-01

    White-nose syndrome is an emerging disease in North America that has caused substantial declines in hibernating bats. A recently identified fungus (Geomyces destructans) causes skin lesions that are characteristic of this disease. Typical signs of this infection were not observed in bats in North America before white-nose syndrome was detected. However, unconfirmed reports from Europe indicated white fungal growth on hibernating bats without associated deaths. To investigate these differences, hibernating bats were sampled in Germany, Switzerland, and Hungary to determine whether G. destructans is present in Europe. Microscopic observations, fungal culture, and genetic analyses of 43 samples from 23 bats indicated that 21 bats of 5 species in 3 countries were colonized by G. destructans. We hypothesize that G. destructans is present throughout Europe and that bats in Europe may be more immunologically or behaviorally resistant to G. destructans than their congeners in North America because they potentially coevolved with the fungus.

  11. Extracellular biosynthesis of silver nanoparticles using the fungus Fusarium semitectum

    SciTech Connect

    Basavaraja, S.; Balaji, S.D.; Lagashetty, Arunkumar; Rajasab, A.H.; Venkataraman, A.

    2008-05-06

    Development of environmental friendly procedures for the synthesis of metal nanoparticles through biological processes is evolving into an important branch of nanobiotechnology. In this paper, we report on the use of fungus 'Fusarium semitectum' for the extracellular synthesis of silver nanoparticles from silver nitrate solution (i.e. through the reduction of Ag{sup +} to Ag{sup 0}). Highly stable and crystalline silver nanoparticles are produced in solution by treating the filtrate of the fungus F. semitectum with the aqueous silver nitrate solution. The formations of nanoparticles are understood from the UV-vis and X-ray diffraction studies. Transmission electron microscopy of the silver particles indicated that they ranged in size from 10 to 60 nm and are mostly spherical in shape. Interestingly the colloidal suspensions of silver nanoparticles are stable for many weeks. Possible medicinal applications of these silver nanoparticles are envisaged.

  12. Mutualistic fungi control crop diversity in fungus-growing ants.

    PubMed

    Poulsen, Michael; Boomsma, Jacobus J

    2005-02-01

    Leaf-cutting ants rear clonal fungi for food and transmit the fungi from mother to daughter colonies so that symbiont mixing and conflict, which result from competition between genetically different clones, are avoided. Here we show that despite millions of years of predominantly vertical transmission, the domesticated fungi actively reject mycelial fragments from neighboring colonies, and that the strength of these reactions are in proportion to the overall genetic difference between these symbionts. Fungal incompatibility compounds remain intact during ant digestion, so that fecal droplets, which are used for manuring newly grown fungus, elicit similar hostile reactions when applied to symbionts from other colonies. Symbiont control over new mycelial growth by manurial imprinting prevents the rearing of multiple crops in fungus gardens belonging to the same colony. PMID:15692054

  13. A new alternariol glucoside from fungus Alternaria alternate cib-137.

    PubMed

    Xu, Guo-Bo; Pu, Xiang; Bai, Huan-Huan; Chen, Xiao-Zhen; Li, Guo-You

    2015-01-01

    A new secondary metabolite, 2-O-methylalternariol 4-O-β-[4-methoxyl-glucopyranoside] (1), together with four known compounds alternariol methyl ether (2), altenuene (3), isoaltenuene (4) and 2-(2'S-hydroxypropyl)-5-methyl-7-hydroxychromone (5), was isolated from the fungus Alternaria alternate cib-137. Its structure was elucidated on the basis of spectroscopic data. Compounds 3 and 4 demonstrated moderate activity against Staphylococcus aureus.

  14. Fungus mediated synthesis of biomedically important cerium oxide nanoparticles

    SciTech Connect

    Khan, Shadab Ali; Ahmad, Absar

    2013-10-15

    Graphical abstract: - Highlights: • First time biological synthesis of cerium oxide oxide nanoparticles using fungus Humicola sp. • Complete characterization of cerium oxide nanoparticles. • Biosynthesis of naturally protein capped, luminescent and water dispersible CeO{sub 2} nanoparticles. • Biosynthesized CeO{sub 2} nanoparticles can be used for many biomedical applications. - Abstract: Nanomaterials can be synthesized by chemical, physical and the more recently discovered biological routes. The biological routes are advantageous over the chemical and physical ones as unlike these, the biological synthesis protocols occur at ambient conditions, are cheap, non-toxic and eco-friendly. Although purely biological and bioinspired methods for the synthesis of nanomaterials are environmentally benign and energy conserving processes, their true potential has not been explored yet and attempts are being made to extend the formation of technologically important nanoparticles using microorganisms like fungi. Though there have been reports on the biosynthesis of oxide nanoparticles by our group in the past, no attempts have been made to employ fungi for the synthesis of nanoparticles of rare earth metals or lanthanides. Here we report for the first time, the bio-inspired synthesis of biomedically important cerium oxide (CeO{sub 2}) nanoparticles using the thermophilic fungus Humicola sp. The fungus Humicola sp. when exposed to aqueous solutions of oxide precursor cerium (III) nitrate hexahydrate (CeN{sub 3}O{sub 9}·6H{sub 2}O) results in the extracellular formation of CeO{sub 2} nanoparticles containing Ce (III) and Ce (IV) mixed oxidation states, confirmed by X-ray Photoemission Spectroscopy (XPS). The formed nanoparticles are naturally capped by proteins secreted by the fungus and thus do not agglomerate, are highly stable, water dispersible and are highly fluorescent as well. The biosynthesized nanoparticles were characterized by UV–vis spectroscopy

  15. Biotransformation of Malachite Green by the Fungus Cunninghamella elegans

    PubMed Central

    Cha, Chang-Jun; Doerge, Daniel R.; Cerniglia, Carl E.

    2001-01-01

    The filamentous fungus Cunninghamella elegans ATCC 36112 metabolized the triphenylmethane dye malachite green with a first-order rate constant of 0.029 μmol h−1 (mg of cells)−1. Malachite green was enzymatically reduced to leucomalachite green and also converted to N-demethylated and N-oxidized metabolites, including primary and secondary arylamines. Inhibition studies suggested that the cytochrome P450 system mediated both the reduction and the N-demethylation reactions. PMID:11526047

  16. The Kinome of Edible and Medicinal Fungus Wolfiporia cocos

    PubMed Central

    Wei, Wei; Shu, Shaohua; Zhu, Wenjun; Xiong, Ying; Peng, Fang

    2016-01-01

    Wolfiporia cocos is an edible and medicinal fungus that grows in association with pine trees, and its dried sclerotium, known as Fuling in China, has been used as a traditional medicine in East Asian countries for centuries. Nearly 10% of the traditional Chinese medicinal preparations contain W. cocos. Currently, the commercial production of Fuling is limited because of the lack of pine-based substrate and paucity of knowledge about the sclerotial development of the fungus. Since protein kinase (PKs) play significant roles in the regulation of growth, development, reproduction, and environmental responses in filamentous fungi, the kinome of W. cocos was analyzed by identifying the PKs genes, studying transcript profiles and assigning PKs to orthologous groups. Of the 10 putative PKs, 11 encode atypical PKs, and 13, 10, 2, 22, and 11 could encoded PKs from the AGC, CAMK, CK, CMGC, STE, and TLK Groups, respectively. The level of transcripts from PK genes associated with sclerotia formation in the mycelium and sclerotium stages were analyzed by qRT-PCR. Based on the functions of the orthologs in Sclerotinia sclerotiorum (a sclerotia-formation fungus) and Saccharomyces cerevisiae, the potential roles of these W. cocos PKs were assigned. To the best of our knowledge, our study is the first identification and functional discussion of the kinome in the edible and medicinal fungus W. cocos. Our study systematically suggests potential roles of W. cocos PKs and provide comprehensive and novel insights into W. cocos sclerotial development and other economically important traits. Additionally, based on our result, genetic engineering can be employed for over expression or interference of some significant PKs genes to promote sclerotial growth and the accumulation of active compounds. PMID:27708635

  17. Biotransformation of fluorene by the fungus Cunninghamella elegans

    SciTech Connect

    Pothuluri, J.V.; Freeman, J.P.; Evans, F.E.; Cerniglia, C.E. )

    1993-06-01

    Fluorene, a tricyclic aromatic hydrocarbon, is formed during the combustion of fossil fuels and is an important pollutant of aquatic ecosystems where it is highly toxic to fish and algae. Few studies on microbial biodegradation of fluorene have been reported. This investigation describes the metabolism of fluorene by the fungus Cunninghamella elegans ATCC 36112 and the identification of major metabolites. 26 refs., 2 figs., 1 tab.

  18. Lasiodiplodins from mangrove endophytic fungus Lasiodiplodia sp. 318.

    PubMed

    Li, Jing; Xue, Yanyu; Yuan, Jie; Lu, Yongjun; Zhu, Xun; Lin, Yongcheng; Liu, Lan

    2016-01-01

    Four new lasiodiplodins (1-4), together with three known analogues, have been isolated from a mangrove endophytic fungus, Lasiodiplodia sp. 318#. Their structures were elucidated by spectroscopic techniques. Cytotoxic activities of compounds 1-7 were evaluated in vitro against human cancer lines THP1, MDA-MB-435, A549, HepG2 and HCT-116. Compound 4 exhibited moderate cytotoxic activities. PMID:26222141

  19. Primordial nucleosynthesis with decaying particles. I - Entropy-producing decays. II - Inert decays

    NASA Technical Reports Server (NTRS)

    Scherrer, Robert J.; Turner, Michael S.

    1988-01-01

    The effect of a nonrelativistic particle X, which decays out of equilibrium, on primordial nucleosynthesis is investigated, including both the energy density of the X particle and the electromagnetic entropy production from its decay. The results are parametrized in terms of the X particle lifetime and the density parameter rm(X), where m(X) is the X particle mass and r is the ratio of X number density to photon number density prior to nucleosynthesis. The results rule out particle lifetimes greater than 1-10 s for large values of rm(X). The question of a decaying particle which produces no electromagnetic entropy in the course of its decay is addressed, and particles which produce both entropy and an inert component in their decay are discussed.

  20. Bioluminescence characteristics of a tropical terrestrial fungus (Basidiomycetes).

    PubMed

    Deheyn, Dimitri D; Latz, Michael I

    2007-01-01

    Freshly collected samples of luminous mycelium of a terrestrial fungus from Panama were investigated for their bioluminescence characteristics. Taxonomic identification of fungal species could not be determined because of the lack of fruiting bodies. Fluorescence excited by 380 nm illumination had an emission spectrum with a main peak at 480 nm and additional chlorophyll peaks related to the wood substrate. Bioluminescence appeared as a continuous glow that did not show any diel variation. The light production was sensitive to temperature and decreased with temperatures higher or lower than ambient. Bioluminescence intensity was sensitive to hydration, increasing by a factor of 400 immediately after exposure to water and increasing by a factor of 1 million after several hours. This increase may have occurred through dilution of superoxide dismutase, which is a suppressive factor of bioluminescence in fungus tissue. The mycelium typically transports nutritive substances back to the fruiting body. The function of luminescent mycelium may be to increase the intensity of light from the fungus and more effectively attract nocturnal insects and other animals that serve as disseminating vectors for fungal spores. PMID:17610297

  1. Solubilization of lignin by the ruminal anaerobic fungus Neocallimastix patriciarum.

    PubMed Central

    McSweeney, C S; Dulieu, A; Katayama, Y; Lowry, J B

    1994-01-01

    The ability of the ruminal anaerobic phycomycete Neocallimastix patriciarum to digest model lignin compounds and lignified structures in plant material was studied in batch culture. The fungus did not degrade or transform model lignin compounds that were representative of the predominant intermonomer linkages in lignin, nor did it solubilize acid detergent lignin that had been isolated from spear grass. In a stem fraction of sorghum, 33.6% of lignin was apparently solubilized by the fungus. Solubilization of ester- and either-linked phenolics accounted for 9.2% of the lignin released. The amounts of free phenolic acids detected in culture fluid were equivalent to the apparent loss of ester-linked phenolics from the sorghum substrate. However, the fungus was unable to cleave the ether bond in hydroxycinnamic acid bridges that cross-link lignin and polysaccharide. It is suggested that the majority of the solubilized lignin fraction was a lignin carbohydrate complex containing ether-linked hydroxycinnamic acids. The lignin carbohydrate complex was probably solubilized through dissolution of xylan in the lignin-xylan matrix rather than by lignin depolymerization. PMID:8085834

  2. Efficient xylose fermentation by the brown rot fungus Neolentinus lepideus.

    PubMed

    Okamoto, Kenji; Kanawaku, Ryuichi; Masumoto, Masaru; Yanase, Hideshi

    2012-02-10

    The efficient production of bioethanol on an industrial scale requires the use of renewable lignocellulosic biomass as a starting material. A limiting factor in developing efficient processes is identifying microorganisms that are able to effectively ferment xylose, the major pentose sugar found in hemicellulose, and break down carbohydrate polymers without pre-treatment steps. Here, a basidiomycete brown rot fungus was isolated as a new biocatalyst with unprecedented fermentability, as it was capable of converting not only the 6-carbon sugars constituting cellulose, but also the major 5-carbon sugar xylose in hemicelluloses, to ethanol. The fungus was identified as Neolentinus lepideus and was capable of assimilating and fermenting xylose to ethanol in yields of 0.30, 0.33, and 0.34 g of ethanol per g of xylose consumed under aerobic, oxygen-limited, and anaerobic conditions, respectively. A small amount of xylitol was detected as the major by-product of xylose metabolism. N. lepideus produced ethanol from glucose, mannose, galactose, cellobiose, maltose, and lactose with yields ranging from 0.34 to 0.38 g ethanol per g sugar consumed, and also exhibited relatively favorable conversion of non-pretreated starch, xylan, and wheat bran. These results suggest that N. lepideus is a promising candidate for cost-effective and environmentally friendly ethanol production from lignocellulosic biomass. To our knowledge, this is the first report on efficient ethanol fermentation from various carbohydrates, including xylose, by a naturally occurring brown rot fungus.

  3. Long-term priority effects among insects and fungi colonizing decaying wood

    PubMed Central

    Weslien, Jan; Djupström, Line B; Schroeder, Martin; Widenfalk, Olof

    2011-01-01

    1. Priority effects have been hypothesized to have long-lasting impact on community structure in natural ecosystems. Long-term studies of priority effects in natural ecosystems are however sparse, especially in terrestrial ecosystems. 2. Wood decay is a slow process involving a high diversity of insect and fungus species. Species interactions that drive change in communities of insects and fungi during wood decay are poorly understood because of a lack of sufficient long-term studies. 3. In this paper, we followed the colonization and succession of wood-living insects and fungi on cut trees during 15 years, from tree death and onwards, in a boreal forest landscape. We test the long-term priority effects hypothesis that the identity and abundance of species that colonize first affect the colonization success of later-arriving species. We also hypothesize that species interact in both facilitative and inhibitory ways, which ultimately affect habitat quality for a red-listed late-succession beetle species. 4. Possible causal associations between species were explored by path analysis. The results indicate that one bark beetle species, Hylurgops palliatus, and one wood-borer species, Monochamus sutor, which colonized the wood during the first year after cutting, influenced the occurrence of a rare, wood-living beetle, Peltis grossa, that started to emerge from the stumps about 10 years later. The positive effects of Hylurgops palliatus and negative effects of M. sutor were largely mediated through the wood-decaying fungus species Fomitopsis pinicola. 5. The study shows that variable priority effects may have long-lasting impact on community assembly in decaying wood. The study also exemplifies new possibilities for managing populations of threatened species by exploring links between early, well-understood species guilds and late, more poorly understood species guilds. PMID:21569031

  4. Long-term priority effects among insects and fungi colonizing decaying wood.

    PubMed

    Weslien, Jan; Djupström, Line B; Schroeder, Martin; Widenfalk, Olof

    2011-11-01

    1. Priority effects have been hypothesized to have long-lasting impact on community structure in natural ecosystems. Long-term studies of priority effects in natural ecosystems are however sparse, especially in terrestrial ecosystems. 2. Wood decay is a slow process involving a high diversity of insect and fungus species. Species interactions that drive change in communities of insects and fungi during wood decay are poorly understood because of a lack of sufficient long-term studies. 3. In this paper, we followed the colonization and succession of wood-living insects and fungi on cut trees during 15 years, from tree death and onwards, in a boreal forest landscape. We test the long-term priority effects hypothesis that the identity and abundance of species that colonize first affect the colonization success of later-arriving species. We also hypothesize that species interact in both facilitative and inhibitory ways, which ultimately affect habitat quality for a red-listed late-succession beetle species. 4. Possible causal associations between species were explored by path analysis. The results indicate that one bark beetle species, Hylurgops palliatus, and one wood-borer species, Monochamus sutor, which colonized the wood during the first year after cutting, influenced the occurrence of a rare, wood-living beetle, Peltis grossa, that started to emerge from the stumps about 10 years later. The positive effects of Hylurgops palliatus and negative effects of M. sutor were largely mediated through the wood-decaying fungus species Fomitopsis pinicola. 5. The study shows that variable priority effects may have long-lasting impact on community assembly in decaying wood. The study also exemplifies new possibilities for managing populations of threatened species by exploring links between early, well-understood species guilds and late, more poorly understood species guilds. PMID:21569031

  5. Optimizing VANDLE for Decay Spectroscopy

    NASA Astrophysics Data System (ADS)

    Brewer, N. T.; Taylor, S. Z.; Grzywacz, R.; Madurga, M.; Paulauskas, S. V.; Cizewski, J. A.; Peters, W. A.; Vandle Collaboration

    2013-10-01

    Understanding the decay properties of neutron rich isotopes has well established importance to the path of the r-process and to the total decay heat for reactor physics. Specifically, the half-life, branching ratio and spectra for β-n decay is of particular interest. With that in mind, we have continued attempts to improve upon the Versatile Array of Neutron Detectors at Low Energy (VANDLE) in terms of efficiency and TOF resolution through the use of new and larger scintillators. Details of the new implementation, design and characterization of the array will be shown and compared to previous results.

  6. Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood.

    PubMed

    Hervé, Vincent; Ketter, Elodie; Pierrat, Jean-Claude; Gelhaye, Eric; Frey-Klett, Pascale

    2016-01-01

    Bacteria and fungi naturally coexist in various environments including forest ecosystems. While the role of saprotrophic basidiomycetes in wood decomposition is well established, the influence of these fungi on the functional diversity of the wood-associated bacterial communities has received much less attention. Based on a microcosm experiment, we tested the hypothesis that both the presence of the white-rot fungus Phanerochaete chrysosporium and the wood, as a growth substrate, impacted the functional diversity of these bacterial communities. Microcosms containing sterile sawdust were inoculated with a microbial inoculum extracted from a forest soil, in presence or in absence of P. chrysosporium and subsequently, three enrichment steps were performed. First, bacterial strains were isolated from different microcosms previously analyzed by 16S rRNA gene-based pyrosequencing. Strains isolated from P. chrysosporium mycosphere showed less antagonism against this fungus compared to the strains isolated from the initial forest soil inoculum, suggesting a selection by the fungus of less inhibitory bacterial communities. Moreover, the presence of the fungus in wood resulted in a selection of cellulolytic and xylanolytic bacterial strains, highlighting the role of mycospheric bacteria in wood decomposition. Additionally, the proportion of siderophore-producing bacteria increased along the enrichment steps, suggesting an important role of bacteria in iron mobilization in decaying-wood. Finally, taxonomic identification of 311 bacterial isolates revealed, at the family level, strong similarities with the high-throughput sequencing data as well as with other studies in terms of taxonomic composition of the wood-associated bacterial community, highlighting that the isolated strains are representative of the wood-associated bacterial communities.

  7. Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood

    PubMed Central

    Hervé, Vincent; Ketter, Elodie; Pierrat, Jean-Claude; Gelhaye, Eric; Frey-Klett, Pascale

    2016-01-01

    Bacteria and fungi naturally coexist in various environments including forest ecosystems. While the role of saprotrophic basidiomycetes in wood decomposition is well established, the influence of these fungi on the functional diversity of the wood-associated bacterial communities has received much less attention. Based on a microcosm experiment, we tested the hypothesis that both the presence of the white-rot fungus Phanerochaete chrysosporium and the wood, as a growth substrate, impacted the functional diversity of these bacterial communities. Microcosms containing sterile sawdust were inoculated with a microbial inoculum extracted from a forest soil, in presence or in absence of P. chrysosporium and subsequently, three enrichment steps were performed. First, bacterial strains were isolated from different microcosms previously analyzed by 16S rRNA gene-based pyrosequencing. Strains isolated from P. chrysosporium mycosphere showed less antagonism against this fungus compared to the strains isolated from the initial forest soil inoculum, suggesting a selection by the fungus of less inhibitory bacterial communities. Moreover, the presence of the fungus in wood resulted in a selection of cellulolytic and xylanolytic bacterial strains, highlighting the role of mycospheric bacteria in wood decomposition. Additionally, the proportion of siderophore-producing bacteria increased along the enrichment steps, suggesting an important role of bacteria in iron mobilization in decaying-wood. Finally, taxonomic identification of 311 bacterial isolates revealed, at the family level, strong similarities with the high-throughput sequencing data as well as with other studies in terms of taxonomic composition of the wood-associated bacterial community, highlighting that the isolated strains are representative of the wood-associated bacterial communities. PMID:26824755

  8. Impact of Phanerochaete chrysosporium on the Functional Diversity of Bacterial Communities Associated with Decaying Wood.

    PubMed

    Hervé, Vincent; Ketter, Elodie; Pierrat, Jean-Claude; Gelhaye, Eric; Frey-Klett, Pascale

    2016-01-01

    Bacteria and fungi naturally coexist in various environments including forest ecosystems. While the role of saprotrophic basidiomycetes in wood decomposition is well established, the influence of these fungi on the functional diversity of the wood-associated bacterial communities has received much less attention. Based on a microcosm experiment, we tested the hypothesis that both the presence of the white-rot fungus Phanerochaete chrysosporium and the wood, as a growth substrate, impacted the functional diversity of these bacterial communities. Microcosms containing sterile sawdust were inoculated with a microbial inoculum extracted from a forest soil, in presence or in absence of P. chrysosporium and subsequently, three enrichment steps were performed. First, bacterial strains were isolated from different microcosms previously analyzed by 16S rRNA gene-based pyrosequencing. Strains isolated from P. chrysosporium mycosphere showed less antagonism against this fungus compared to the strains isolated from the initial forest soil inoculum, suggesting a selection by the fungus of less inhibitory bacterial communities. Moreover, the presence of the fungus in wood resulted in a selection of cellulolytic and xylanolytic bacterial strains, highlighting the role of mycospheric bacteria in wood decomposition. Additionally, the proportion of siderophore-producing bacteria increased along the enrichment steps, suggesting an important role of bacteria in iron mobilization in decaying-wood. Finally, taxonomic identification of 311 bacterial isolates revealed, at the family level, strong similarities with the high-throughput sequencing data as well as with other studies in terms of taxonomic composition of the wood-associated bacterial community, highlighting that the isolated strains are representative of the wood-associated bacterial communities. PMID:26824755

  9. Radiative Leptonic B Decays

    SciTech Connect

    Chen, Edward Tann

    2007-01-01

    We present the results of a search for B+ meson decays into γℓ+v, where ℓ = e,μ. We use a sample of 232 million B$\\bar{B}$ meson pairs recorded at the Υ(4S) resonance with the BABAR detector at the PEP-II B factory. We measure a partial branching fraction Δβ in a restricted region of phase space that reduces the effect of theoretical uncertainties, requiring the lepton energy to be in the range 1.875 and 2.850 GeV, the photon energy to be in the range 0.45 and 2.35 GeV, and the cosine of the angle between the lepton and photon momenta to be less than -0.36, with all quantities computed in the Υ(4S) center-of-mass frame. We find Δβ(B+ → γℓ+v) = (-0.31.5+1.3(statistical) -0.6+0.6(systematic) ± 0.1(theoretical)) x 10-6, under the assumption of lepton universality. Interpreted as a 90% confidence-level Bayesian upper limit, the result corresponds to 1.7 x 10-6 for a prior at in amplitude, and 2.3 x 10-6 for a prior at in branching fraction.

  10. RARE DECAYS INCLUDING PENGUINS

    SciTech Connect

    Eigen, G

    2003-12-04

    The authors present a preliminary measurement of the exclusive charmless semileptonic B decays, B {yields} {rho}{ell}{nu}, and the extraction of the CKM parameters V{sub ub}. IN a data sample of 55 x 10{sup 6} B{bar B} events they measure a branching fraction of {Beta}(B {yields} {rho}{ell}{nu}) = (3.39 {+-} 0.44{sub stat} {+-} 0.52{sub sys} {+-} 0.60{sub th}) x 10{sup -4} yielding |V{sub ub}| = (3.69 {+-} 0.23{sub stat} {+-} 0.27{sub sys -0.59th}{sup +0.40}) x 10{sup -3}. Next, they report on a preliminary study of the radiative penguin modes B {yields} K{ell}{sup +}{ell}{sup -} and B {yields} K*{ell}{sup +}{ell}{sup -}. In a data sample of 84 x 10{sup 6} B{bar B} events they observe a significant signal (4.4{sigma}) in B {yields} K{ell}{sup +}{ell}{sup -}, yielding a branching fraction of {Beta}(B {yields} K{ell}{sup +}{ell}{sup -}) = (0.78{sub -0.20-0.18}{sup +0.24+0.11}) x 10{sup -6}. In B {yields} K*{ell}{sup +}{ell}{sup -} the observed yield is not yet significant (2.8{sigma}), yielding an upper limit of the branching fraction of {Beta}(B {yields} K*{ell}{sup +}{ell}{sup -}) 3.0 x 10{sup -6} {at} 90% confidence level. Finally, they summarize preliminary results of searches for B {yields} {rho}({omega}){gamma}, B{sup +} {yields} K{sup +} {nu}{bar {nu}} and B{sup 0} {yields} {ell}{sup +}{ell}{sup -}.

  11. The origin of the attine ant-fungus mutualism.

    PubMed

    Mueller, U G; Schultz, T R; Currie, C R; Adams, R M; Malloch, D

    2001-06-01

    Cultivation of fungus for food originated about 45-65 million years ago in the ancestor of fungus-growing ants (Formicidae, tribe Attini), representing an evolutionary transition from the life of a hunter-gatherer of arthropod prey, nectar, and other plant juices, to the life of a farmer subsisting on cultivated fungi. Seven hypotheses have been suggested for the origin of attine fungiculture, each differing with respect to the substrate used by the ancestral attine ants for fungal cultivation. Phylogenetic information on the cultivated fungi, in conjunction with information on the nesting biology of extant attine ants and their presumed closest relatives, reveal that the attine ancestors probably did not encounter their cultivars-to-be in seed stores (von Ihering 1894), in rotting wood (Forel 1902), as mycorrhizae (Garling 1979), on arthropod corpses (von Ihering 1894) or ant faeces in nest middens (Wheeler 1907). Rather, the attine ant-fungus mutualism probably arose from adventitious interactions with fungi that grew on walls of nests built in leaf litter (Emery 1899), or from a system of fungal myrmecochory in which specialized fungi relied on ants for dispersal (Bailey 1920) and in which the ants fortuitously vectored these fungi from parent to offspring nests prior to a true fungicultural stage. Reliance on fungi as a dominant food source has evolved only twice in ants: first in the attine ants, and second in some ant species in the solenopsidine genus Megalomyrmex that either coexist as trophic parasites in gardens of attine hosts or aggressively usurp gardens from them. All other known ant-fungus associations are either adventitious or have nonnutritional functions (e.g., strengthening of carton-walls in ant nests). There exist no unambiguous reports of facultative mycophagy in ants, but such trophic ant-fungus interactions would most likely occur underground or in leaf litter and thus escape easy observation. Indirect evidence of fungivory can be deduced

  12. CP violation in K decays

    SciTech Connect

    Gilman, F.J.

    1989-05-01

    Recent theoretical and experimental progress on the manifestation of CP violation in K decays, and toward understanding whether CP violation originates in a phase, or phases, in the weak mixing matrix of quarks is reviewed. 23 refs., 10 figs.

  13. The Search for Proton Decay.

    ERIC Educational Resources Information Center

    Marshak, Marvin L.

    1984-01-01

    Provides the rationale for and examples of experiments designed to test the stability of protons and bound neutrons. Also considers the unification question, cosmological implications, current and future detectors, and current status of knowledge on proton decay. (JN)

  14. Questions Students Ask: Beta Decay.

    ERIC Educational Resources Information Center

    Koss, Jordan; Hartt, Kenneth

    1988-01-01

    Answers a student's question about the emission of a positron from a nucleus. Discusses the problem from the aspects of the uncertainty principle, beta decay, the Fermi Theory, and modern physics. (YP)

  15. Lorentz violation and {alpha} decay

    SciTech Connect

    Altschul, Brett

    2009-01-01

    Relating the effective Lorentz violation coefficients for composite particles to the coefficients for their constituent fields is a challenging problem. We calculate the Lorentz violation coefficients relevant to the dynamics of an {alpha} particle in terms of proton and neutron coefficients. The {alpha}-particle coefficients would lead to anisotropies in the {alpha} decays of nuclei, and because the decay process involves quantum tunneling, the effects of any Lorentz violations could be exponentially enhanced.

  16. Reionization and dark matter decay

    NASA Astrophysics Data System (ADS)

    Oldengott, Isabel M.; Boriero, Daniel; Schwarz, Dominik J.

    2016-08-01

    Cosmic reionization and dark matter decay can impact observations of the cosmic microwave sky in a similar way. A simultaneous study of both effects is required to constrain unstable dark matter from cosmic microwave background observations. We compare two reionization models with and without dark matter decay. We find that a reionization model that fits also data from quasars and star forming galaxies results in tighter constraints on the reionization optical depth τreio, but weaker constraints on the spectral index ns than the conventional parametrization. We use the Planck 2015 data to constrain the effective decay rate of dark matter to Γeff < 2.9 × 10-25/s at 95% C.L. This limit is robust and model independent. It holds for any type of decaying dark matter and it depends only weakly on the chosen parametrization of astrophysical reionization. For light dark matter particles that decay exclusively into electromagnetic components this implies a limit of Γ < 5.3 × 10-26/s at 95% C.L. Specifying the decay channels, we apply our result to the case of keV-mass sterile neutrinos as dark matter candidates and obtain constraints on their mixing angle and mass, which are comparable to the ones from the diffuse X-ray background.

  17. Reionization and dark matter decay

    NASA Astrophysics Data System (ADS)

    Oldengott, Isabel M.; Boriero, Daniel; Schwarz, Dominik J.

    2016-08-01

    Cosmic reionization and dark matter decay can impact observations of the cosmic microwave sky in a similar way. A simultaneous study of both effects is required to constrain unstable dark matter from cosmic microwave background observations. We compare two reionization models with and without dark matter decay. We find that a reionization model that fits also data from quasars and star forming galaxies results in tighter constraints on the reionization optical depth τreio, but weaker constraints on the spectral index ns than the conventional parametrization. We use the Planck 2015 data to constrain the effective decay rate of dark matter to Γeff < 2.9 × 10‑25/s at 95% C.L. This limit is robust and model independent. It holds for any type of decaying dark matter and it depends only weakly on the chosen parametrization of astrophysical reionization. For light dark matter particles that decay exclusively into electromagnetic components this implies a limit of Γ < 5.3 × 10‑26/s at 95% C.L. Specifying the decay channels, we apply our result to the case of keV-mass sterile neutrinos as dark matter candidates and obtain constraints on their mixing angle and mass, which are comparable to the ones from the diffuse X-ray background.

  18. Ultrastructural analysis of the behavior of the dimorphic fungus Microbotryum violaceum in fungus-induced anthers of female Silene latifolia flowers.

    PubMed

    Uchida, Wakana; Matsunaga, Sachihiro; Kawano, Shigeyuki

    2005-12-01

    The development of male organs is induced in female flowers of the dioecious plant Silene latifolia by infection with the fungus Microbotryum violaceum. Stamens in a healthy female flower grow only to stage 6, whereas those in an infected female flower develop to the mature stage (stage 12), at which the stamens are filled with fungal teliospores instead of pollen grains. To investigate these host-parasite interactions, young floral buds and fungus-induced anthers of infected female flowers were examined by electron microscopy following fixation by a high-pressure freezing method. Using this approach, we found that parasitic hyphae of this fungus contain several extracellular vesicles and have a consistent appearance up to stage 8. At that stage, parasitic hyphae are observed adjacent to dying sporogenous cells in the infected female anther. At stage 9, an increased number of dead and dying sporogenous cells is observed, among which the sporogenous hyphae of the fungus develop and form initial teliospores. Several types of electron-dense material are present in proximity to some fungi at this stage. The initial teliospores contain two types of vacuoles, and the fungus cell wall contains abundant carbohydrate, as revealed by silver protein staining. The sporogenous cell is probably sensitive to infection by the fungus, resulting in disruption. In addition, the fungus accelerates cell death in the anther and utilizes constituents of the dead host cell to form the mature teliospore. PMID:16333578

  19. Isolated fungal promoters and gene transcription terminators and methods of protein and chemical production in a fungus

    DOEpatents

    Dai, Ziyu; Lasure, Linda L; Magnuson, Jon K

    2014-05-27

    The present invention encompasses isolated gene regulatory elements and gene transcription terminators that are differentially expressed in a native fungus exhibiting a first morphology relative to the native fungus exhibiting a second morphology. The invention also encompasses a method of utilizing a fungus for protein or chemical production. A transformed fungus is produced by transforming a fungus with a recombinant polynucleotide molecule. The recombinant polynucleotide molecule contains an isolated polynucleotide sequence linked operably to another molecule comprising a coding region of a gene of interest. The gene regulatory element and gene transcription terminator may temporally and spatially regulate expression of particular genes for optimum production of compounds of interest in a transgenic fungus.

  20. Isolated fungal promoters and gene transcription terminators and methods of protein and chemical production in a fungus

    DOEpatents

    Dai, Ziyu; Lasure, Linda L.; Magnuson, Jon K.

    2008-11-11

    The present invention encompasses isolated gene regulatory elements and gene transcription terminators that are differentially expressed in a native fungus exhibiting a first morphology relative to the native fungus exhibiting a second morphology. The invention also encompasses a method of utilizing a fungus for protein or chemical production. A transformed fungus is produced by transforming a fungus with a recombinant polynucleotide molecule. The recombinant polynucleotide molecule contains an isolated polynucleotide sequence linked operably to another molecule comprising a coding region of a gene of interest. The gene regulatory element and gene transcription terminator may temporally and spatially regulate expression of particular genes for optimum production of compounds of interest in a transgenic fungus.

  1. Isolated Fungal Promoters and Gene Transcription Terminators and Methods of Protein and Chemical Production in a Fungus

    DOEpatents

    Dai, Ziyu; Lasure, Linda L.; Magnuson, Jon K.

    2008-11-11

    The present invention encompasses isolated gene regulatory elements and gene transcription terminators that are differentially expressed in a native fungus exhibiting a first morphology relative to the native fungus exhibiting a second morphology. The invention also encompasses a method of utilizing a fungus for protein or chemical production. A transformed fungus is produced by transforming a fungus with a recombinant polynucleotide molecule. The recombinant polynucleotide molecule contains an isolated polynucleotide sequence linked operably to another molecule comprising a coding region of a gene of interest. The gene regulatory element and gene transcription terminator may temporally and spatially regulate expression of particular genes for optimum production of compounds of interest in a transgenic fungus.

  2. A comparative genomic analysis of the oxidative enzymes potentially involved in lignin degradation by Agaricus bisporus.

    PubMed

    Doddapaneni, Harshavardhan; Subramanian, Venkataramanan; Fu, Bolei; Cullen, Dan

    2013-06-01

    The oxidative enzymatic machinery for degradation of organic substrates in Agaricus bisporus (Ab) is at the core of the carbon recycling mechanisms in this fungus. To date, 156 genes have been tentatively identified as part of this oxidative enzymatic machinery, which includes 26 peroxidase encoding genes, nine copper radical oxidase [including three putative glyoxal oxidase-encoding genes (GLXs)], 12 laccases sensu stricto and 109 cytochrome P450 monooxygenases. Comparative analyses of these enzymes in Ab with those of the white-rot fungus, Phanerochaete chrysosporium, the brown-rot fungus, Postia placenta, the coprophilic litter fungus, Coprinopsis cinerea and the ectomychorizal fungus, Laccaria bicolor, revealed enzyme diversity consistent with adaptation to substrates rich in humic substances and partially degraded plant material. For instance, relative to wood decay fungi, Ab cytochrome P450 genes were less numerous (109 gene models), distributed among distinctive families, and lacked extensive duplication and clustering. Viewed together with P450 transcript accumulation patterns in three tested growth conditions, these observations were consistent with the unique Ab lifestyle. Based on tandem gene arrangements, a certain degree of gene duplication seems to have occurred in this fungus in the copper radical oxidase (CRO) and the laccase gene families. In Ab, high transcript levels and regulation of the heme-thiolate peroxidases, two manganese peroxidases and the three GLX-like genes are likely in response to complex natural substrates, including lignocellulose and its derivatives, thereby suggesting an important role in lignin degradation. On the other hand, the expression patterns of the related CROs suggest a developmental role in this fungus. Based on these observations, a brief comparative genomic overview of the Ab oxidative enzyme machinery is presented. PMID:23583597

  3. Orchid-fungus fidelity: a marriage meant to last?

    PubMed

    McCormick, Melissa K; Whigham, Dennis F; Sloan, Dan; O'Malley, Kelly; Hodkinson, Brendan

    2006-04-01

    The characteristics of plant-mycorrhizae associations are known to vary in both time and space, but the ecological consequences of variation in the dynamics of plant-fungus interactions are poorly understood. For example, do plants associate with single fungi or multiple fungi simultaneously, and do the associations persist through a plant's lifetime or do plants support a succession of different fungi? We investigated these and other questions related to plant-fungus interactions in Goodyera pubescens, an evergreen terrestrial orchid of the eastern United States, that interacts with closely related fungi in the genus Tulasnella. Unlike the mycorrhizal associations of other plants, orchid-mycorrhizal associations only benefit the orchid, based on current evidence. Many terrestrial orchids have been found to associate with specific groups of fungi. This characteristic could potentially limit orchids to relatively narrow ranges of environmental conditions and may be a contributing factor in the decline of many orchids in the face of changing environmental conditions. We found that G. pubescens protocorms (developing embryos prior to leaf production) and adults associated with only one fungal individual at a time. The orchid-fungus association persists for years, but during a drought period that was associated with the death of many plants, surviving plants were able to switch to new fungal individuals. These results suggest that G. pubescens interacts with the same fungal partner during periods of modest environmental variation but is able to switch to a different fungal partner. We hypothesize that the ability to switch fungi allows G. pubescens to survive more extreme environmental perturbations. However, laboratory experiments suggest that switching fungi has potential costs, as it increases the risk of mortality, especially for smaller individuals. Our findings indicate that it is unlikely that switching fungi is a common way to improve tolerance of less severe

  4. Secretome analysis of the fungus Trichoderma harzianum grown on cellulose.

    PubMed

    Do Vale, Luis H F; Gómez-Mendoza, Diana P; Kim, Min-Sik; Pandey, Akhilesh; Ricart, Carlos A O; Ximenes F Filho, Edivaldo; Sousa, Marcelo V

    2012-08-01

    Trichoderma harzianum is a mycoparasitic filamentous fungus that produces and secretes a wide range of extracellular hydrolytic enzymes used in cell wall degradation. Due to its potential in biomass conversion, T. harzianum draws great attention from biofuel and biocontrol industries and research. Here, we report an extensive secretome analysis of T. harzianum. The fungus was grown on cellulose medium, and its secretome was analyzed by a combination of enzymology, 2DE, MALDI-MS and -MS/MS (Autoflex II), and LC-MS/MS (LTQ-Orbitrap XL). A total of 56 proteins were identified using high-resolution MS. Interestingly, although cellulases were found, the major hydrolytic enzymes secreted in the cellulose medium were chitinases and endochitinases, which may reflect the biocontrol feature of T. harzianum. The glycoside hydrolase family, including chitinases (EC 3.2.1.14), endo-N-acetylglucosaminidases (EC 3.2.1.96), hexosaminidases (EC 3.2.1.52), galactosidases (EC 3.2.1.23), xylanases (EC 3.2.1.8), exo-1,3-glucanases (EC 3.2.1.58), endoglucanases (EC 3.2.1.4), xylosidases (EC 3.2.1.37), α-L-arabinofuranosidase (EC 3.2.1.55), N-acetylhexosaminidases (EC 3.2.1.52), and other enzymes represented 51.36% of the total secretome. Few representatives were classified in the protease family (8.90%). Others (17.60%) are mostly intracellular proteins. A considerable part of the secretome was composed of hypothetical proteins (22.14%), probably because of the absence of an annotated T. harzianum genome. The T. harzianum secretome composition highlights the importance of this fungus as a rich source of hydrolytic enzymes for bioconversion and biocontrol applications.

  5. MUON DECAY ASYMMETRIES FROM KOL YIELDS POM+M-DECAYS.

    SciTech Connect

    DIWAN, M.V.; MA, H.; TRUEMAN, T.L.

    2001-06-12

    We have examined the decay K{sub L}{sup 0} {yields} {pi}{sup 0} {mu}{sup +} {mu}{sup -} in which the branching ratio, the muon energy asymmetry and the muon decay asymmetry could be measured. In particular, we find that within the Standard Model the longitudinal polarization (PL) of the muon is proportional to the direct CP violating amplitude. On the other hand the energy asymmetry and the out-of-plane polarization (P{sub N}) depend on both indirect and direct CP violating amplitudes. Although the branching ratio is small and difficult to measure because of background, the asymmetries could be large {Omicron}(1) in the Standard Model. A combined analysis of the energy asymmetry, P{sub L} and P{sub N} could be used to separate indirect, CPV, direct CPV, and CP conserving contributions to the decay.

  6. Bioactive isocoumarins isolated from the endophytic fungus Microdochium bolleyi.

    PubMed

    Zhang, Wen; Krohn, Karsten; Draeger, Siegfried; Schulz, Barbara

    2008-06-01

    Three new isocoumarin derivatives ( 2- 4) were isolated together with monocerin ( 1) from Microdochium bolleyi, an endophytic fungus from Fagonia cretica, a herbaceous plant of the semiarid coastal regions of Gomera. Compounds 2 and 3 are both 12-oxo epimers of 1, and 4 is a ring-opened derivative of 1. The structures were elucidated by detailed spectroscopic analysis and comparison with reported data. The absolute configurations were determined by a modified Mosher's method. Compounds 1, 3, and 4 showed good antifungal, antibacterial, and antialgal activities against Microbotryum violaceum, Escherichia coli, Bacillus megaterium, and Chlorella fusca. Compound 2 was moderately antifungal and antialgal. PMID:18510362

  7. Elemental variations in the germinating fungus Phytophthora palmivora

    NASA Astrophysics Data System (ADS)

    Mazzolini, A. P.; Grant, B. R.; Sealock, R. M.; Legge, G. J. F.

    1991-03-01

    We have measured the elemental variations between zoospores and germinating cystospores of the fungus Phytophthora palmivora, using a scanning proton microprobe. Averaged over a number of individual cells, our results indicate that the level of Ca is much lower in germinating cystospores than in zoospores. The levels of S, Cl, and Zn also appear to be lower, and the level of K appears to be higher. The spatial distribution of elements within the germinating cystospore is very similar for P, S, Cl, K, Mn, Fe, and Cu, but significantly different for Ca and Zn.

  8. Bioactive compounds from the endophytic fungus Fusarium proliferatum.

    PubMed

    Dame, Zerihun T; Silima, Beauty; Gryzenhout, Marieka; van Ree, Teunis

    2016-06-01

    The crude extract of an endophytic fungus isolated from Syzygium cordatum and identified as Fusarium proliferatum showed 100% cytotoxicity against the brine shrimp Artemia salina at 100 μg/mL. Seven coloured, biologically active metabolites - including ergosta-5,7,22-trien-3β-ol, nectriafurone-8-methyl ether, 9-O-methyl fusarubin, bostrycoidin, bostrycoidin-9-methyl ether and 8-hydroxy-5,6-dimethoxy-2-methyl-3-(2-oxo-propyl)-1,4-naphthoquinone- were isolated from the extract. PMID:26158312

  9. Dihydroisocoumarins from the Mangrove-Derived Fungus Penicillium citrinum

    PubMed Central

    Huang, Guo-Lei; Zhou, Xue-Ming; Bai, Meng; Liu, Yu-Xin; Zhao, Yan-Lei; Luo, You-Ping; Niu, Yan-Yan; Zheng, Cai-Juan; Chen, Guang-Ying

    2016-01-01

    Three new dihydroisocoumarin penicimarins G–I (1–3), together with one known dihydroisocoumarin (4) and three known meroterpenoids (5–7), were obtained from a fungus Penicillium citrinum isolated from the mangrove Bruguiera sexangula var. rhynchopetala collected in the South China Sea. Their structures were elucidated by the detailed analysis of spectroscopic data. The absolute configuration of 1 was determined by the X-ray diffraction analysis using Cu Kα radiation. The absolute configurations of 2 and 3 were determined by comparison of their circular dichroism (CD) spectra with the literature. All compounds were evaluated for their antibacterial activities and cytotoxic activities. PMID:27735855

  10. Cepstrum based feature extraction method for fungus detection

    NASA Astrophysics Data System (ADS)

    Yorulmaz, Onur; Pearson, Tom C.; Çetin, A. Enis

    2011-06-01

    In this paper, a method for detection of popcorn kernels infected by a fungus is developed using image processing. The method is based on two dimensional (2D) mel and Mellin-cepstrum computation from popcorn kernel images. Cepstral features that were extracted from popcorn images are classified using Support Vector Machines (SVM). Experimental results show that high recognition rates of up to 93.93% can be achieved for both damaged and healthy popcorn kernels using 2D mel-cepstrum. The success rate for healthy popcorn kernels was found to be 97.41% and the recognition rate for damaged kernels was found to be 89.43%.

  11. Asteltoxins from the Entomopathogenic Fungus Pochonia bulbillosa 8-H-28.

    PubMed

    Adachi, Hayamitsu; Doi, Hiroyasu; Kasahara, Yuichi; Sawa, Ryuichi; Nakajima, Kaori; Kubota, Yumiko; Hosokawa, Nobuo; Tateishi, Ken; Nomoto, Akio

    2015-07-24

    New asteltoxins C (3) and D (4) were found in the extract of the entomopathogenic fungus Pochonia bulbillosa 8-H-28. Compound 2, which was spectroscopically identical with the known asteltoxin B, was isolated, and structural analysis led to a revision of the structure of asteltoxin B. Compounds 2 and 4 have a novel tricyclic ring system connected to a dienyl α-pyrone structure. Compound 3 has a 2,8-dioxabicyclo[3.3.0]octane ring similar to that of asteltoxin (1). Compound 3 showed potent antiproliferative activity against NIAS-SL64 cells derived from the fat body of Spodoptera litura larvae, while 2 and 4 were inactive.

  12. Double-stranded RNA in the entomopathogenic fungus metarhizium flavoviride.

    PubMed

    Martins, M K; Furlaneto, M C; Sosa-Gomez, D R; Faria, M R; Fungaro, M H

    1999-08-01

    Bands of dsRNA were detected in five out of seven isolates of the entomopathogenic fungus Metarhizium flavoviride. The identity of these bands was proven by RNase and S1-nuclease treatments. The transference of dsRNA between isolates (from CG291 to CG442) was successfully carried out through forced heterokaryons. Isogenic strains, with or without dsRNA, were submitted to virulence tests against the grasshopper Rhammatocerus schistocercoides. In contrast to what has been found in some phytopathogenic fungi, these dsRNA fragments did not cause hypovirulence to M. flavoviride.

  13. Extracellular oxidases of the lignin-degrading fungus Panus tigrinus.

    PubMed

    Cadimaliev, D A; Revin, V V; Atykyan, N A; Samuilov, V D

    2005-06-01

    Two extracellular oxidases (laccases) were isolated from the extracellular fluid of the fungus Panus (Lentinus) tigrinus cultivated in low-nitrogen medium supplemented with birch sawdust. The enzymes were purified by successive chromatography on columns with TEAE-cellulose and DEAE-Toyopearl 650M. Both oxidases catalyze oxidation of pyrocatechol and ABTS. Moreover, oxidase 1 also catalyzes oxidation of guaiacol, o-phenylenediamine, and syringaldazine. The enzymes have identical pH (7.0) and temperature (60-65 degrees C) optimums. Absorption spectra of the oxidases differ from the spectra of typical "blue" laccases and are similar to the spectrum of yellow oxidase. PMID:16038613

  14. Two new antimicrobial metabolites from the endophytic fungus, Seimatosporium sp.

    PubMed

    Hussain, Hidayat; Krohn, Karsten; Schulz, Barbara; Draeger, Siegfried; Nazir, Mamona; Saleem, Muhammad

    2012-03-01

    Two new acaranoic acids, named seimatoporic acid A and B (1, and 2), together with six known compounds, R-(-)-mellein (3), cis-4-hydroxymellein (4), trans-4-hydroxymellein (5), 4R-hydroxy-5-methylmellein (6), (-)-5-hydroxymethylmellein (7), and ergosterol (8) were isolated from an endophytic fungus, Seimatosporium sp, by a bioassay-guided procedure. The structures of the new compounds have been assigned from analysis of the 1H and 13C NMR spectra, DEPT, and by 2D COSY, HMQC, HMBC and NOESY experiments. A mixture of compounds 1 and 2 showed strong antifungal activity against Botrytis cinerea, Septoria tritici, and Pyricularia oryzae. PMID:22545398

  15. Nucleoside derivatives from the marine-derived fungus Aspergillus versicolor.

    PubMed

    Chen, Min; Fu, Xiu-Mei; Kong, Chui-Jian; Wang, Chang-Yun

    2014-01-01

    Four nucleoside derivatives (1-4) were isolated from the fungus Aspergillus versicolor derived from the gorgonian Dichotella gemmacea collected in the South China Sea. Their structures were elucidated by comprehensive spectroscopic method of NMR and MS analysis. All isolated metabolites were evaluated for their cytotoxicity, antibacterial activity and lethality towards brine shrimp Artemia salina. Compounds 1/2 exhibited selective antibacterial activity against Staphylococcus epidermidis with an MIC value of 12.5 μM. It should be noted that 1 and 2, whose structures were listed in SciFinder Scholar, had no associated reference. This is the first report about their isolation, structure elucidation and biological activities.

  16. Cytotoxic cytochalasins from marine-derived fungus Arthrinium arundinis.

    PubMed

    Wang, Junfeng; Wang, Zhen; Ju, Zhiran; Wan, Junting; Liao, Shengrong; Lin, Xiuping; Zhang, Tianyu; Zhou, Xuefeng; Chen, Hao; Tu, Zhengchao; Liu, Yonghong

    2015-01-01

    Four new cytochalasins, arthriniumnins A-D (1-4), a new natural product, ketocytochalasin (5), as well as five known cytochalasin analogues (6-10) were isolated and identified from the fungus Arthrinium arundinis ZSDS1-F3 from the sponge Phakellia fusca. Their structures were elucidated by NMR spectroscopic and mass spectrometric analyses, as well as single crystal X-ray diffraction. Compounds 6 and 9 showed cytotoxicity against K562, A549, Huh-7, H1975, MCF-7, U937, BGC823, HL60, Hela, and MOLT-4 cell lines, with IC50 values ranging from 1.13 to 47.4 µM.

  17. Unsolved problems in hadronic charm decay

    SciTech Connect

    Browder, T.E.

    1989-08-01

    This paper describes several outstanding problems in the study of hadronic decays of charmed mesons where further experimental work and theoretical understanding is needed. Four topics are stressed: double Cabibbo suppressed decays (DCSD) of D/sup +/ mesons, hadronic D/sub s/ decays, weak hadronic quasi-two-body decays to pairs of vector mesons, and penguin decays of D mesons. 24 refs., 10 figs., 5 tabs.

  18. Decay curve study in a standard electron capture decay

    SciTech Connect

    Nishimura, D.; Fukuda, M.; Kisamori, K.; Kuwada, Y.; Makisaka, K.; Matsumiya, R.; Matsuta, K.; Mihara, M.; Takagi, A.; Yokoyama, R.; Izumikawa, T.; Ohtsubo, T.; Suzuki, T.; Yamaguchi, T.

    2010-05-12

    We have searched for a time-modulated decay in a standard electron capture experiment for {sup 140}Pr, in order to confirm a report from GSI, where an oscillatory decay has been observed for hydrogen-like {sup 140}Pr and {sup 142}Pm ions in the cooler storage ring. {sup 140}Pr has been produced with the {sup 140}Ce(p, n) reaction by a pulsed proton beam accelerated from the Van de Graaff accelerator at Osaka University. Resultant time dependence of the K{sub a}lpha and K{sub b}eta X-ray intensities from the daughter shows no oscillatory behavior.

  19. Biological activities of ophiobolin K and 6-epi-ophiobolin K produced by the endophytic fungus Aspergillus calidoustus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The endophytic fungus, Aspergillus calidoustus, was isolated from the plant species Acanthospermum australe (Asteraceae). A dichloromethane extract of the fungus displayed antifungal, antiprotozoal, and cytotoxic activities. Aspergillus calidoustus was identified using molecular, physiological and m...

  20. Fun Microbiology: Using a Plant Pathogenic Fungus To Demonstrate Koch's Postulates.

    ERIC Educational Resources Information Center

    Mitchell, James K.; Orsted, Kathy M.; Warnes, Carl E.

    1997-01-01

    Describes an experiment using a plant pathogenic fungus in which students learn to follow aseptic techniques, grow and produce spores of a fungus, use a hemacytometer for enumerating spores, prepare serial dilutions, grow and inoculate plants, isolate a pure culture using agar streak plates, and demonstrate the four steps of Koch's postulates.…

  1. Microsatellite variability in the entomopathogenic fungus Paeciolomyces fumosoroseus: genetic diversity and population structure

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The hyphomycete Paecilomyces fumosoroseus (Pfr) is a geographically widespread fungus capable of infecting various insect hosts. The fungus has been used for the biological control of several important insect pests of agriculture. However knowledge of the fungus’ genetic diversity and population str...

  2. Nigrosphaerin A., a new isachromene derivative from the endophytic fungus Nigrospora sphaerica

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Nigrosphaerin A, a new isochromene derivative (1) was isolated from the endophytic fungus Nigrospora sphaerica and chemically identified as 3-(3,4-dihydroxyphenyl)-4,6,8-trihydroxy-1H-isochromen-1-one-6-O-ß-D- glucopyranoside. In addition nineteen known compounds (2-20) isolated from the same fungus...

  3. Genome Sequence of the Mucoromycotina Fungus Umbelopsis isabellina, an Effective Producer of Lipids

    SciTech Connect

    Takeda, Itaru; Tamano, Koichi; Yamane, Noriko; Ishii, Tomoko; Miura, Ai; Umemura, Myco; Terai, Goro; Baker, Scott E.; Koike, Hideaki; Machida, Masayuki

    2014-02-27

    Umbelopsis isabellina is a fungus in the subdivision Mucoromycotina, many members of which have been shown to be oleaginous and have become important organisms for producing oil because of their high level of intracellular lipid accumulation from various feedstocks. The genome sequence of U. isabellina NBRC 7884 was determined and annotated, and this information might provide insights into the oleaginous properties of this fungus.

  4. Specificity in the symbiotic association between fungus-growing ants and protective Pseudonocardia bacteria.

    PubMed

    Cafaro, Matías J; Poulsen, Michael; Little, Ainslie E F; Price, Shauna L; Gerardo, Nicole M; Wong, Bess; Stuart, Alison E; Larget, Bret; Abbot, Patrick; Currie, Cameron R

    2011-06-22

    Fungus-growing ants (tribe Attini) engage in a mutualism with a fungus that serves as the ants' primary food source, but successful fungus cultivation is threatened by microfungal parasites (genus Escovopsis). Actinobacteria (genus Pseudonocardia) associate with most of the phylogenetic diversity of fungus-growing ants; are typically maintained on the cuticle of workers; and infection experiments, bioassay challenges and chemical analyses support a role of Pseudonocardia in defence against Escovopsis through antibiotic production. Here we generate a two-gene phylogeny for Pseudonocardia associated with 124 fungus-growing ant colonies, evaluate patterns of ant-Pseudonocardia specificity and test Pseudonocardia antibiotic activity towards Escovopsis. We show that Pseudonocardia associated with fungus-growing ants are not monophyletic: the ants have acquired free-living strains over the evolutionary history of the association. Nevertheless, our analysis reveals a significant pattern of specificity between clades of Pseudonocardia and groups of related fungus-growing ants. Furthermore, antibiotic assays suggest that despite Escovopsis being generally susceptible to inhibition by diverse Actinobacteria, the ant-derived Pseudonocardia inhibit Escovopsis more strongly than they inhibit other fungi, and are better at inhibiting this pathogen than most environmental Pseudonocardia strains tested. Our findings support a model that many fungus-growing ants maintain specialized Pseudonocardia symbionts that help with garden defence.

  5. Using copper sulfate to control egg fungus at Keo Fish Farm

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Keo Fish Farm is the biggest producer of hybrid striped bass fry in the world. The hatchery manager asked about treatments to control fungus on eggs which occurred fairly often. Our lab has been working on gaining FDA-approval to use copper sulfate to control fungus on catfish eggs, so we were con...

  6. Draft Genome Sequence and Gene Annotation of the Entomopathogenic Fungus Verticillium hemipterigenum

    PubMed Central

    Horn, Fabian; Habel, Andreas; Scharf, Daniel H.; Dworschak, Jan; Brakhage, Axel A.; Guthke, Reinhard

    2015-01-01

    Verticillium hemipterigenum (anamorph Torrubiella hemipterigena) is an entomopathogenic fungus and produces a broad range of secondary metabolites. Here, we present the draft genome sequence of the fungus, including gene structure and functional annotation. Genes were predicted incorporating RNA-Seq data and functionally annotated to provide the basis for further genome studies. PMID:25614560

  7. Differential response by Melaleuca quinquenervia trees to attack by the rust fungus Puccinia psidii in Florida

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Melaleuca quinquenervia (melaleuca, paperbark tree) is an exotic invasive tree in Florida, Hawaii, and some Caribbean islands. Puccinia psidii (guava rust-fungus) is a Neotropical rust fungus, reported to attack many species in the Myrtaceae and one genus in the Heteropyxidaceae, both members of the...

  8. Draft Genome Sequence of the Ant-Associated Fungus Phialophora attae (CBS 131958)

    PubMed Central

    Moreno, Leandro F.; Stielow, J. Benjamin; de Vries, Michel; Weiss, Vinicius A.; Vicente, Vania A.

    2015-01-01

    The black yeast Phialophora attae was isolated from the cuticle of tropical ant gynes. The ant-fungus association is sustained due to symbiotic evolutionary adaptations that allow fungal assimilation and tolerance of toxic compounds produced by the ant. The genome sequence of the first ant-associated fungus, P. attae, is presented here. PMID:26586868

  9. Mating and Progeny Isolation in The Corn Smut Fungus Ustilago maydis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The corn smut pathogen, Ustilago maydis (U. maydis) (DC.) Corda, is a semi-obligate plant pathogenic fungus in the phylum Basidiomycota (Alexopoulos, Mims and Blackwell, 1996). The fungus can be easily cultured in its haploid yeast phase on common laboratory media. However, to complete its sexual cy...

  10. Bioproducts and morphological features of diverse isolates of the fungus Aureobasidium pullulans

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Aureobasidium pullulans is a fungus included among the “black yeasts.” Although many strains are predominantly yeast-like, the species is actually polymorphic, exhibiting a variety of complex forms. The fungus is ubiquitous, routinely found on the surface of leaves, wood, painted walls, etc. We rece...

  11. Heavy quark spectroscopy and decay

    SciTech Connect

    Schindler, R.H.

    1987-01-01

    The understanding of q anti q systems containing heavy, charmed, and bottom quarks has progressed rapidly in recent years, through steady improvements in experimental techniques for production and detection of their decays. These lectures are meant to be an experimentalist's review of the subject. In the first of two lectures, the existing data on the spectroscopy of the bound c anti c and b anti b systems will be discussed. Emphasis is placed on comparisons with the theoretical models. The second lecture covers the rapidly changing subject of the decays of heavy mesons (c anti q and b anti q), and their excited states. In combination, the spectroscopy and decays of heavy quarks are shown to provide interesting insights into both the strong and electroweak interactions of the heavy quarks. 103 refs., 39 figs.

  12. Decay of capillary wave turbulence.

    PubMed

    Deike, Luc; Berhanu, Michael; Falcon, Eric

    2012-06-01

    We report on the observation of freely decaying capillary wave turbulence on the surface of a fluid. The capillary wave turbulence spectrum decay is found to be self-similar in time with the same power law exponent as the one found in the stationary regime, in agreement with weak turbulence predictions. The amplitude of all Fourier modes are found to decrease exponentially with time at the same damping rate. The longest wavelengths involved in the system are shown to be damped by a viscous surface boundary layer. These long waves play the role of an energy source during the decay that sustains nonlinear interactions to keep capillary waves in a wave turbulent state.

  13. No sex in fungus-farming ants or their crops.

    PubMed

    Himler, Anna G; Caldera, Eric J; Baer, Boris C; Fernández-Marín, Hermógenes; Mueller, Ulrich G

    2009-07-22

    Asexual reproduction imposes evolutionary handicaps on asexual species, rendering them prone to extinction, because asexual reproduction generates novel genotypes and purges deleterious mutations at lower rates than sexual reproduction. Here, we report the first case of complete asexuality in ants, the fungus-growing ant Mycocepurus smithii, where queens reproduce asexually but workers are sterile, which is doubly enigmatic because the clonal colonies of M. smithii also depend on clonal fungi for food. Degenerate female mating anatomy, extensive field and laboratory surveys, and DNA fingerprinting implicate complete asexuality in this widespread ant species. Maternally inherited bacteria (e.g. Wolbachia, Cardinium) and the fungal cultivars can be ruled out as agents inducing asexuality. M. smithii societies of clonal females provide a unique system to test theories of parent-offspring conflict and reproductive policing in social insects. Asexuality of both ant farmer and fungal crop challenges traditional views proposing that sexual farmer ants outpace coevolving sexual crop pathogens, and thus compensate for vulnerabilities of their asexual crops. Either the double asexuality of both farmer and crop may permit the host to fully exploit advantages of asexuality for unknown reasons or frequent switching between crops (symbiont reassociation) generates novel ant-fungus combinations, which may compensate for any evolutionary handicaps of asexuality in M. smithii.

  14. Reciprocal genomic evolution in the ant–fungus agricultural symbiosis

    PubMed Central

    Nygaard, Sanne; Hu, Haofu; Li, Cai; Schiøtt, Morten; Chen, Zhensheng; Yang, Zhikai; Xie, Qiaolin; Ma, Chunyu; Deng, Yuan; Dikow, Rebecca B.; Rabeling, Christian; Nash, David R.; Wcislo, William T.; Brady, Seán G.; Schultz, Ted R.; Zhang, Guojie; Boomsma, Jacobus J.

    2016-01-01

    The attine ant–fungus agricultural symbiosis evolved over tens of millions of years, producing complex societies with industrial-scale farming analogous to that of humans. Here we document reciprocal shifts in the genomes and transcriptomes of seven fungus-farming ant species and their fungal cultivars. We show that ant subsistence farming probably originated in the early Tertiary (55–60 MYA), followed by further transitions to the farming of fully domesticated cultivars and leaf-cutting, both arising earlier than previously estimated. Evolutionary modifications in the ants include unprecedented rates of genome-wide structural rearrangement, early loss of arginine biosynthesis and positive selection on chitinase pathways. Modifications of fungal cultivars include loss of a key ligninase domain, changes in chitin synthesis and a reduction in carbohydrate-degrading enzymes as the ants gradually transitioned to functional herbivory. In contrast to human farming, increasing dependence on a single cultivar lineage appears to have been essential to the origin of industrial-scale ant agriculture. PMID:27436133

  15. Reciprocal genomic evolution in the ant-fungus agricultural symbiosis.

    PubMed

    Nygaard, Sanne; Hu, Haofu; Li, Cai; Schiøtt, Morten; Chen, Zhensheng; Yang, Zhikai; Xie, Qiaolin; Ma, Chunyu; Deng, Yuan; Dikow, Rebecca B; Rabeling, Christian; Nash, David R; Wcislo, William T; Brady, Seán G; Schultz, Ted R; Zhang, Guojie; Boomsma, Jacobus J

    2016-01-01

    The attine ant-fungus agricultural symbiosis evolved over tens of millions of years, producing complex societies with industrial-scale farming analogous to that of humans. Here we document reciprocal shifts in the genomes and transcriptomes of seven fungus-farming ant species and their fungal cultivars. We show that ant subsistence farming probably originated in the early Tertiary (55-60 MYA), followed by further transitions to the farming of fully domesticated cultivars and leaf-cutting, both arising earlier than previously estimated. Evolutionary modifications in the ants include unprecedented rates of genome-wide structural rearrangement, early loss of arginine biosynthesis and positive selection on chitinase pathways. Modifications of fungal cultivars include loss of a key ligninase domain, changes in chitin synthesis and a reduction in carbohydrate-degrading enzymes as the ants gradually transitioned to functional herbivory. In contrast to human farming, increasing dependence on a single cultivar lineage appears to have been essential to the origin of industrial-scale ant agriculture. PMID:27436133

  16. Dibutyl phthalate biodegradation by the white rot fungus, Polyporus brumalis.

    PubMed

    Lee, Soo-Min; Lee, Jae-Won; Koo, Bon-Wook; Kim, Myung-Kil; Choi, Don-Ha; Choi, In-Gyu

    2007-08-15

    In this study, white rot fungus, Polyporus brumalis, was applied to degrade dibutyl phthalate (DBP), a major environmental pollutant. The degradation potential and resulting products were evaluated with HPLC and GC/MS. As DBP concentration increased to 250, 750, and 1,250 microM, the mycelial growth of P. brumalis was inhibited. However, growth was still observed in the 1,250 microM concentration. DBP was nearly eliminated from culture medium of P. brumalis within 12 days, with 50% of DBP adsorbed by the mycelium. Diethyl phthalate (DEP) and monobutyl phthalate (MBP) were detected as intermediate degradation products of DBP. In culture medium, the concentration of DEP was higher than that of MBP during the incubation period. After 12-15 days, the concentrations of both decreased rapidly in the culture medium. The primary final degradation product of DBP in culture medium was phthalic acid anhydride, as well as trace amounts of aromatic compounds, such as alpha-hydroxyphenylacetic acid, benzyl alcohol, and O-hydroxyphenylacetic acid. According to these results, the degradation of DBP in culture medium by the white rot fungus, P. brumalis, may be completed through two pathways-transesterification and de-esterification-which successively combine into an intracellular degradation pathway.

  17. Modulation of antimicrobial metabolites production by the fungus Aspergillus parasiticus

    PubMed Central

    Bracarense, Adriana A.P.; Takahashi, Jacqueline A.

    2014-01-01

    Biosynthesis of active secondary metabolites by fungi occurs as a specific response to the different growing environments. Changes in this environment alter the chemical and biological profiles leading to metabolites diversification and consequently to novel pharmacological applications. In this work, it was studied the influence of three parameters (fermentation length, medium composition and aeration) in the biosyntheses of antimicrobial metabolites by the fungus Aspergillus parasiticus in 10 distinct fermentation periods. Metabolism modulation in two culturing media, CYA and YES was evaluated by a 22 full factorial planning (ANOVA) and on a 23 factorial planning, role of aeration, medium composition and carbohydrate concentration were also evaluated. In overall, 120 different extracts were prepared, their HPLC profiles were obtained and the antimicrobial activity against A. flavus, C. albicans, E. coli and S. aureus of all extracts was evaluated by microdilution bioassay. Yield of kojic acid, a fine chemical produced by the fungus A. parasiticus was determined in all extracts. Statistical analyses pointed thirteen conditions able to modulate the production of bioactive metabolites by A. parasiticus. Effect of carbon source in metabolites diversification was significant as shown by the changes in the HPLC profiles of the extracts. Most of the extracts presented inhibition rates higher than that of kojic acid as for the extract obtained after 6 days of fermentation in YES medium under stirring. Kojic acid was not the only metabolite responsible for the activity since some highly active extracts showed to possess low amounts of this compound, as determined by HPLC. PMID:24948950

  18. β decay of Na32

    NASA Astrophysics Data System (ADS)

    Mattoon, C. M.; Sarazin, F.; Hackman, G.; Cunningham, E. S.; Austin, R. A. E.; Ball, G. C.; Chakrawarthy, R. S.; Finlay, P.; Garrett, P. E.; Grinyer, G. F.; Hyland, B.; Koopmans, K. A.; Leslie, J. R.; Phillips, A. A.; Schumaker, M. A.; Scraggs, H. C.; Schwarzenberg, J.; Smith, M. B.; Svensson, C. E.; Waddington, J. C.; Walker, P. M.; Washbrook, B.; Zganjar, E.

    2007-01-01

    The β-decay of Na32 has been studied using β-γ coincidences. New transitions and levels are tentatively placed in the level scheme of Mg32 from an analysis of γ-γ and β-γ-γ coincidences. The observation of the indirect feeding of the 2321 keV state in Mg32 removes some restrictions previously placed on the spin assignment for this state. No evidence of a state at 2117 keV in Mg32 is found. Previously unobserved weak transitions up to 5.4 MeV were recorded but could not be placed in the decay scheme of Na32.

  19. Laser-Assisted Muon Decay

    SciTech Connect

    Liu Aihua; Li Shumin; Berakdar, Jamal

    2007-06-22

    We show theoretically that the muon lifetime can be changed dramatically by embedding the decaying muon in a strong linearly polarized laser field. Evaluating the S-matrix elements taking all electronic multiphoton processes into account we find that a CO{sub 2} laser with an electric field amplitude of 10{sup 6} V cm{sup -1} results in an order of magnitude shorter lifetime of the muon. We also analyze the dependencies of the decay rate on the laser frequency and intensity.

  20. Resonant Auger decay driving intermolecular Coulombic decay in molecular dimers

    NASA Astrophysics Data System (ADS)

    Trinter, F.; Schöffler, M. S.; Kim, H.-K.; Sturm, F. P.; Cole, K.; Neumann, N.; Vredenborg, A.; Williams, J.; Bocharova, I.; Guillemin, R.; Simon, M.; Belkacem, A.; Landers, A. L.; Weber, Th.; Schmidt-Böcking, H.; Dörner, R.; Jahnke, T.

    2014-01-01

    In 1997, it was predicted that an electronically excited atom or molecule placed in a loosely bound chemical system (such as a hydrogen-bonded or van-der-Waals-bonded cluster) could efficiently decay by transferring its excess energy to a neighbouring species that would then emit a low-energy electron. This intermolecular Coulombic decay (ICD) process has since been shown to be a common phenomenon, raising questions about its role in DNA damage induced by ionizing radiation, in which low-energy electrons are known to play an important part. It was recently suggested that ICD can be triggered efficiently and site-selectively by resonantly core-exciting a target atom, which then transforms through Auger decay into an ionic species with sufficiently high excitation energy to permit ICD to occur. Here we show experimentally that resonant Auger decay can indeed trigger ICD in dimers of both molecular nitrogen and carbon monoxide. By using ion and electron momentum spectroscopy to measure simultaneously the charged species created in the resonant-Auger-driven ICD cascade, we find that ICD occurs in less time than the 20femtoseconds it would take for individual molecules to undergo dissociation. Our experimental confirmation of this process and its efficiency may trigger renewed efforts to develop resonant X-ray excitation schemes for more localized and targeted cancer radiation therapy.

  1. Accumulation and chemical states of radiocesium by fungus Saccharomyces cerevisiae

    NASA Astrophysics Data System (ADS)

    Ohnuki, Toshihiko; Sakamoto, Fuminori; Kozai, Naofumi; Yamasaki, Shinya; Yu, Qianqian

    2014-05-01

    After accident of Fukushima Daiichi Nuclear Power Plant, the fall-out radiocesium was deposited on the ground. Filamentous fungus is known to accumulate radiocesium in environment, even though many minerals are involved in soil. These facts suggest that fungus affect the migration behavior of radiocesium in the environment. However, accumulation mechanism of radiocesium by fungus is not understood. In the present study, accumulation and chemical states change of Cs by unicellular fungus of Saccharomyces cerevisiae have been studied to elucidate the role of microorganisms in the migration of radiocesium in the environment. Two different experimental conditions were employed; one is the accumulation experiments of radiocesium by S. cerevisiae from the agar medium containing 137Cs and a mineral of zeolite, vermiculite, smectite, mica, or illite. The other is the experiments using stable cesium to examine the chemical states change of Cs. In the former experiment, the cells were grown on membrane filter of 0.45 μm installed on the agar medium. After the grown cells were weighed, radioactivity in the cells was measured by an autoradiography technique. The mineral weight contents were changed from 0.1% to 1% of the medium. In the latter experiment, the cells were grown in the medium containing stable Cs between 1 mM and 10mM. The Cs accumulated cells were analyzed by SEM-EDS and EXAFS. The adsorption experiments of cesium by the cells under resting condition were also conducted to test the effect of cells metabolic activity. Without mineral in the medium, cells of S. cerevisiae accumulated 1.5x103 Bq/g from the medium containing 137Cs of 2.6x102 Bq/g. When mineral was added in the medium, concentration of 137Cs in the cells decreased. The concentration of 137Cs in the cells from the medium containing different minerals were in the following order; smectite, illite, mica > vermiculite > zeolite. This order was nearly the same as the inverse of distribution coefficient of

  2. Decay Data Evaluation Project (DDEP): evaluation of the main 233Pa decay characteristics.

    PubMed

    Chechev, Valery P; Kuzmenko, Nikolay K

    2006-01-01

    The results of a decay data evaluation are presented for 233Pa (beta-) decay to nuclear levels in 233U. These evaluated data have been obtained within the Decay Data Evaluation Project using information published up to 2005.

  3. Decay Data Evaluation Project (DDEP): evaluation of the main 233Pa decay characteristics.

    PubMed

    Chechev, Valery P; Kuzmenko, Nikolay K

    2006-01-01

    The results of a decay data evaluation are presented for 233Pa (beta-) decay to nuclear levels in 233U. These evaluated data have been obtained within the Decay Data Evaluation Project using information published up to 2005. PMID:16574422

  4. Defending against parasites: fungus-growing ants combine specialized behaviours and microbial symbionts to protect their fungus gardens

    PubMed Central

    Little, Ainslie E.F; Murakami, Takahiro; Mueller, Ulrich G; Currie, Cameron R

    2005-01-01

    Parasites influence host biology and population structure, and thus shape the evolution of their hosts. Parasites often accelerate the evolution of host defences, including direct defences such as evasion and sanitation and indirect defences such as the management of beneficial microbes that aid in the suppression or removal of pathogens. Fungus-growing ants are doubly burdened by parasites, needing to protect their crops as well as themselves from infection. We show that parasite removal from fungus gardens is more complex than previously realized. In response to infection of their fungal gardens by a specialized virulent parasite, ants gather and compress parasitic spores and hyphae in their infrabuccal pockets, then deposit the resulting pellet in piles near their gardens. We reveal that the ants' infrabuccal pocket functions as a specialized sterilization device, killing spores of the garden parasite Escovopsis. This is apparently achieved through a symbiotic association with actinomycetous bacteria in the infrabuccal pocket that produce antibiotics which inhibit Escovopsis. The use of the infrabuccal pocket as a receptacle to sequester Escovopsis, and as a location for antibiotic administration by the ants' bacterial mutualist, illustrates how the combination of behaviour and microbial symbionts can be a successful defence strategy for hosts. PMID:17148313

  5. Towards an integrated understanding of the consequences of fungus domestication on the fungus-growing termite gut microbiota.

    PubMed

    Poulsen, Michael

    2015-08-01

    Approximately 30 million years ago (MYA), the subfamily of higher termites Macrotermitinae domesticated a fungus, Termitomyces, as the main plant decomposer and food source for the termite host. The origin of fungiculture shifted the composition of the termite gut microbiota, and some of the functional implications of this shift have recently been established. I review reports on the composition of the Macrotermitinae gut microbiota, evidence for a subfamily core gut microbiota, and the first insight into functional complementarity between fungal and gut symbionts. In addition, I argue that we need to explore the capacities of all members of the symbiotic communities, including better solidifying Termitomyces role(s) in order to understand putative complementary gut bacterial contributions. Approaches that integrate natural history and sequencing data to elucidate symbiont functions will be powerful, particularly if executed in comparative analyses across the well-established congruent termite-fungus phylogenies. This will allow for testing if gut communities have evolved in parallel with their hosts, with implications for our general understanding of the evolution of gut symbiont communities with hosts. PMID:25581852

  6. Multiple photon emission in heavy particle decays

    NASA Technical Reports Server (NTRS)

    Asakimori, K.; Burnett, T. H.; Cherry, M. L.; Christl, M. J.; Dake, S.; Derrickson, J. H.; Fountain, W. F.; Fuki, M.; Gregory, J. C.; Hayashi, T.

    1994-01-01

    Cosmic ray interactions, at energies above 1 TeV/nucleon, in emulsion chambers flown on high altitude balloons have yielded two events showing apparent decays of a heavy particle into one charged particle and four photons. The photons converted into electron pairs very close to the decay vertex. Attempts to explain this decay topology with known particle decays are presented. Unless both events represent a b yields u transition, which is statistically unlikely, then other known decay modes for charmed or bottom particles do not account satisfactorily for these observations. This could indicate, possibly, a new decay channel.

  7. CP violation and rare decays

    SciTech Connect

    Quigg, C.

    2000-01-24

    After a brief essay on the current state of particle physics and possible approaches to the opportunities that have presented themselves, the author summarizes the contributions to the Third Workshop on Physics and Detectors for DA{Phi}NE that deal with CP Violation and Rare Decays.

  8. Rare decays at the Tevatron

    SciTech Connect

    Farrington, S.M.; /Liverpool U.

    2006-01-01

    The confidence level limits of the CDF and D0 searches for the B{sub s}{sup 0}, B{sub d}{sup 0} {yields} {mu}{sup +}{mu}{sup -} and B{sub s}{sup 0} {yields} {mu}{sup +}{mu}{sup -}{phi} rare decays are presented.

  9. First observation of the decay

    NASA Astrophysics Data System (ADS)

    Aaij, R.; Abellan Beteta, C.; Adeva, B.; Adinolfi, M.; Adrover, C.; Affolder, A.; Ajaltouni, Z.; Albrecht, J.; Alessio, F.; Alexander, M.; Ali, S.; Alkhazov, G.; Alvarez Cartelle, P.; Alves, A. A.; Amato, S.; Amerio, S.; Amhis, Y.; Anderlini, L.; Anderson, J.; Andreassen, R.; Appleby, R. B.; Aquines Gutierrez, O.; Archilli, F.; Artamonov, A.; Artuso, M.; Aslanides, E.; Auriemma, G.; Bachmann, S.; Back, J. J.; Baesso, C.; Balagura, V.; Baldini, W.; Barlow, R. J.; Barschel, C.; Barsuk, S.; Barter, W.; Bauer, Th.; Bay, A.; Beddow, J.; Bedeschi, F.; Bediaga, I.; Belogurov, S.; Belous, K.; Belyaev, I.; Ben-Haim, E.; Benayoun, M.; Bencivenni, G.; Benson, S.; Benton, J.; Berezhnoy, A.; Bernet, R.; Bettler, M.-O.; van Beuzekom, M.; Bien, A.; Bifani, S.; Bird, T.; Bizzeti, A.; Bjørnstad, P. M.; Blake, T.; Blanc, F.; Blouw, J.; Blusk, S.; Bocci, V.; Bondar, A.; Bondar, N.; Bonivento, W.; Borghi, S.; Borgia, A.; Bowcock, T. J. V.; Bowen, E.; Bozzi, C.; Brambach, T.; van den Brand, J.; Bressieux, J.; Brett, D.; Britsch, M.; Britton, T.; Brook, N. H.; Brown, H.; Burducea, I.; Bursche, A.; Busetto, G.; Buytaert, J.; Cadeddu, S.; Callot, O.; Calvi, M.; Calvo Gomez, M.; Camboni, A.; Campana, P.; Campora Perez, D.; Carbone, A.; Carboni, G.; Cardinale, R.; Cardini, A.; Carranza-Mejia, H.; Carson, L.; Carvalho Akiba, K.; Casse, G.; Castillo Garcia, L.; Cattaneo, M.; Cauet, Ch.; Charles, M.; Charpentier, Ph.; Chen, P.; Chiapolini, N.; Chrzaszcz, M.; Ciba, K.; Cid Vidal, X.; Ciezarek, G.; Clarke, P. E. L.; Clemencic, M.; Cliff, H. V.; Closier, J.; Coca, C.; Coco, V.; Cogan, J.; Cogneras, E.; Collins, P.; Comerma-Montells, A.; Contu, A.; Cook, A.; Coombes, M.; Coquereau, S.; Corti, G.; Couturier, B.; Cowan, G. A.; Craik, D. C.; Cunliffe, S.; Currie, R.; D'Ambrosio, C.; David, P.; David, P. N. Y.; Davis, A.; De Bonis, I.; De Bruyn, K.; De Capua, S.; De Cian, M.; De Miranda, J. M.; De Paula, L.; De Silva, W.; De Simone, P.; Decamp, D.; Deckenhoff, M.; Del Buono, L.; Derkach, D.; Deschamps, O.; Dettori, F.; Di Canto, A.; Dijkstra, H.; Dogaru, M.; Donleavy, S.; Dordei, F.; Dosil Suárez, A.; Dossett, D.; Dovbnya, A.; Dupertuis, F.; Dzhelyadin, R.; Dziurda, A.; Dzyuba, A.; Easo, S.; Egede, U.; Egorychev, V.; Eidelman, S.; van Eijk, D.; Eisenhardt, S.; Eitschberger, U.; Ekelhof, R.; Eklund, L.; El Rifai, I.; Elsasser, Ch.; Elsby, D.; Falabella, A.; Färber, C.; Fardell, G.; Farinelli, C.; Farry, S.; Fave, V.; Ferguson, D.; Fernandez Albor, V.; Ferreira Rodrigues, F.; Ferro-Luzzi, M.; Filippov, S.; Fiore, M.; Fitzpatrick, C.; Fontana, M.; Fontanelli, F.; Forty, R.; Francisco, O.; Frank, M.; Frei, C.; Frosini, M.; Furcas, S.; Furfaro, E.; Gallas Torreira, A.; Galli, D.; Gandelman, M.; Gandini, P.; Gao, Y.; Garofoli, J.; Garosi, P.; Garra Tico, J.; Garrido, L.; Gaspar, C.; Gauld, R.; Gersabeck, E.; Gersabeck, M.; Gershon, T.; Ghez, Ph.; Gibson, V.; Gligorov, V. V.; Göbel, C.; Golubkov, D.; Golutvin, A.; Gomes, A.; Gordon, H.; Grabalosa Gándara, M.; Graciani Diaz, R.; Granado Cardoso, L. A.; Graugés, E.; Graziani, G.; Grecu, A.; Greening, E.; Gregson, S.; Grünberg, O.; Gui, B.; Gushchin, E.; Guz, Yu.; Gys, T.; Hadjivasiliou, C.; Haefeli, G.; Haen, C.; Haines, S. C.; Hall, S.; Hampson, T.; Hansmann-Menzemer, S.; Harnew, N.; Harnew, S. T.; Harrison, J.; Hartmann, T.; He, J.; Heijne, V.; Hennessy, K.; Henrard, P.; Hernando Morata, J. A.; van Herwijnen, E.; Hicheur, A.; Hicks, E.; Hill, D.; Hoballah, M.; Holtrop, M.; Hombach, C.; Hopchev, P.; Hulsbergen, W.; Hunt, P.; Huse, T.; Hussain, N.; Hutchcroft, D.; Hynds, D.; Iakovenko, V.; Idzik, M.; Ilten, P.; Jacobsson, R.; Jaeger, A.; Jans, E.; Jaton, P.; Jing, F.; John, M.; Johnson, D.; Jones, C. R.; Joram, C.; Jost, B.; Kaballo, M.; Kandybei, S.; Karacson, M.; Karbach, T. M.; Kenyon, I. R.; Kerzel, U.; Ketel, T.; Keune, A.; Khanji, B.; Kochebina, O.; Komarov, I.; Koopman, R. F.; Koppenburg, P.; Korolev, M.; Kozlinskiy, A.; Kravchuk, L.; Kreplin, K.; Kreps, M.; Krocker, G.; Krokovny, P.; Kruse, F.; Kucharczyk, M.; Kudryavtsev, V.; Kvaratskheliya, T.; La Thi, V. N.; Lacarrere, D.; Lafferty, G.; Lai, A.; Lambert, D.; Lambert, R. W.; Lanciotti, E.; Lanfranchi, G.; Langenbruch, C.; Latham, T.; Lazzeroni, C.; Le Gac, R.; van Leerdam, J.; Lees, J.-P.; Lefèvre, R.; Leflat, A.; Lefrançois, J.; Leo, S.; Leroy, O.; Lesiak, T.; Leverington, B.; Li, Y.; Li Gioi, L.; Liles, M.; Lindner, R.; Linn, C.; Liu, B.; Liu, G.; Lohn, S.; Longstaff, I.; Lopes, J. H.; Lopez Asamar, E.; Lopez-March, N.; Lu, H.; Lucchesi, D.; Luisier, J.; Luo, H.; Machefert, F.; Machikhiliyan, I. V.; Maciuc, F.; Maev, O.; Malde, S.; Manca, G.; Mancinelli, G.; Marconi, U.; Märki, R.; Marks, J.; Martellotti, G.; Martens, A.; Martín Sánchez, A.; Martinelli, M.; Martinez Santos, D.; Martins Tostes, D.; Massafferri, A.; Matev, R.; Mathe, Z.; Matteuzzi, C.; Maurice, E.; Mazurov, A.; McCarthy, J.; McNab, A.; McNulty, R.; Meadows, B.; Meier, F.; Meissner, M.; Merk, M.; Milanes, D. A.; Minard, M.-N.; Molina Rodriguez, J.; Monteil, S.; Moran, D.; Morawski, P.; Morello, M. J.; Mountain, R.; Mous, I.; Muheim, F.; Müller, K.; Muresan, R.; Muryn, B.; Muster, B.; Naik, P.; Nakada, T.; Nandakumar, R.; Nasteva, I.; Needham, M.; Neufeld, N.; Nguyen, A. D.; Nguyen, T. D.; Nguyen-Mau, C.; Nicol, M.; Niess, V.; Niet, R.; Nikitin, N.; Nikodem, T.; Nomerotski, A.; Novoselov, A.; Oblakowska-Mucha, A.; Obraztsov, V.; Oggero, S.; Ogilvy, S.; Okhrimenko, O.; Oldeman, R.; Orlandea, M.; Otalora Goicochea, J. M.; Owen, P.; Oyanguren, A.; Pal, B. K.; Palano, A.; Palutan, M.; Panman, J.; Papanestis, A.; Pappagallo, M.; Parkes, C.; Parkinson, C. J.; Passaleva, G.; Patel, G. D.; Patel, M.; Patrick, G. N.; Patrignani, C.; Pavel-Nicorescu, C.; Pazos Alvarez, A.; Pellegrino, A.; Penso, G.; Pepe Altarelli, M.; Perazzini, S.; Perego, D. L.; Perez Trigo, E.; Pérez-Calero Yzquierdo, A.; Perret, P.; Perrin-Terrin, M.; Pessina, G.; Petridis, K.; Petrolini, A.; Phan, A.; Picatoste Olloqui, E.; Pietrzyk, B.; Pilař, T.; Pinci, D.; Playfer, S.; Plo Casasus, M.; Polci, F.; Polok, G.; Poluektov, A.; Polycarpo, E.; Popov, D.; Popovici, B.; Potterat, C.; Powell, A.; Prisciandaro, J.; Pritchard, A.; Prouve, C.; Pugatch, V.; Puig Navarro, A.; Punzi, G.; Qian, W.; Rademacker, J. H.; Rakotomiaramanana, B.; Rangel, M. S.; Raniuk, I.; Rauschmayr, N.; Raven, G.; Redford, S.; Reid, M. M.; dos Reis, A. C.; Ricciardi, S.; Richards, A.; Rinnert, K.; Rives Molina, V.; Roa Romero, D. A.; Robbe, P.; Rodrigues, E.; Rodriguez Perez, P.; Roiser, S.; Romanovsky, V.; Romero Vidal, A.; Rouvinet, J.; Ruf, T.; Ruffini, F.; Ruiz, H.; Ruiz Valls, P.; Sabatino, G.; Saborido Silva, J. J.; Sagidova, N.; Sail, P.; Saitta, B.; Salzmann, C.; Sanmartin Sedes, B.; Sannino, M.; Santacesaria, R.; Santamarina Rios, C.; Santovetti, E.; Sapunov, M.; Sarti, A.; Satriano, C.; Satta, A.; Savrie, M.; Savrina, D.; Schaack, P.; Schiller, M.; Schindler, H.; Schlupp, M.; Schmelling, M.; Schmidt, B.; Schneider, O.; Schopper, A.; Schune, M.-H.; Schwemmer, R.; Sciascia, B.; Sciubba, A.; Seco, M.; Semennikov, A.; Sepp, I.; Serra, N.; Serrano, J.; Seyfert, P.; Shapkin, M.; Shapoval, I.; Shatalov, P.; Shcheglov, Y.; Shears, T.; Shekhtman, L.; Shevchenko, O.; Shevchenko, V.; Shires, A.; Silva Coutinho, R.; Skwarnicki, T.; Smith, N. A.; Smith, E.; Smith, M.; Sokoloff, M. D.; Soler, F. J. P.; Soomro, F.; Souza, D.; De Paula, B. Souza; Spaan, B.; Sparkes, A.; Spradlin, P.; Stagni, F.; Stahl, S.; Steinkamp, O.; Stoica, S.; Stone, S.; Storaci, B.; Straticiuc, M.; Straumann, U.; Subbiah, V. K.; Swientek, S.; Syropoulos, V.; Szczekowski, M.; Szczypka, P.; Szumlak, T.; T'Jampens, S.; Teklishyn, M.; Teodorescu, E.; Teubert, F.; Thomas, C.; Thomas, E.; van Tilburg, J.; Tisserand, V.; Tobin, M.; Tolk, S.; Tonelli, D.; Topp-Joergensen, S.; Torr, N.; Tournefier, E.; Tourneur, S.; Tran, M. T.; Tresch, M.; Tsaregorodtsev, A.; Tsopelas, P.; Tuning, N.; Ubeda Garcia, M.; Ukleja, A.; Urner, D.; Uwer, U.; Vagnoni, V.; Valenti, G.; Vazquez Gomez, R.; Vazquez Regueiro, P.; Vecchi, S.; Velthuis, J. J.; Veltri, M.; Veneziano, G.; Vesterinen, M.; Viaud, B.; Vieira, D.; Vilasis-Cardona, X.; Vollhardt, A.; Volyanskyy, D.; Voong, D.; Vorobyev, A.; Vorobyev, V.; Voß, C.; Voss, H.; Waldi, R.; Wallace, R.; Wandernoth, S.; Wang, J.; Ward, D. R.; Watson, N. K.; Webber, A. D.; Websdale, D.; Whitehead, M.; Wicht, J.; Wiechczynski, J.; Wiedner, D.; Wiggers, L.; Wilkinson, G.; Williams, M. P.; Williams, M.; Wilson, F. F.; Wishahi, J.; Witek, M.; Wotton, S. A.; Wright, S.; Wu, S.; Wyllie, K.; Xie, Y.; Xing, Z.; Yang, Z.; Young, R.; Yuan, X.; Yushchenko, O.; Zangoli, M.; Zavertyaev, M.; Zhang, F.; Zhang, L.; Zhang, W. C.; Zhang, Y.; Zhelezov, A.; Zhokhov, A.; Zhong, L.; Zvyagin, A.

    2013-11-01

    The first observation of the decay is reported. The analysis is based on a data sample corresponding to an integrated luminosity of 1.0 fb-1 of pp collisions at TeV, collected with the LHCb detector. A yield of 30 ± 6 decays is found in the mass windows 1012.5 < M ( K + K -) < 1026.5 MeV/ c 2 and 746 < M( K - π +) < 1046 MeV/ c 2. The signal yield is found to be dominated by decays, and the corresponding branching fraction is measured to be = (1.10 ± 0.24 (stat) ± 0.14 (syst) ± 0.08 ( f d / f s )) × 10-6, where the uncertainties are statistical, systematic and from the ratio of fragmentation fractions f d / f s which accounts for the different production rate of B 0 and mesons. The significance of signal is 6.1 standard deviations. The fraction of longitudinal polarization in decays is found to be f 0 = 0.51 ± 0.15 (stat) ± 0.07 (syst). [Figure not available: see fulltext.

  10. Nuclear structure from radioactive decay

    SciTech Connect

    Wood, J.L.

    1990-09-30

    This report discusses the nuclear structure of the following isotopes as a result of radioactive decays: neutron-deficient iridium isotopes; neutron-deficient platinum isotopes; neutron-deficient gold isotopes; neutron-deficient mercury isotopes; neutron-deficient thallium isotopes; neutron-deficient lead isotopes; neutron-deficient promethium isotopes; and neutron-deficient samarium isotopes.

  11. Interatomic Coulombic decay in nanodroplets

    NASA Astrophysics Data System (ADS)

    Sisourat, Nicolas

    2014-05-01

    Interatomic (molecular) Coulombic decay (ICD) is an ultrafast non-radiative electronic decay process for excited atoms or molecules embedded in a chemical environment. Via ICD, the excited system can get rid of the excess energy, which is transferred to one of the neighbors and ionize it. ICD produces two charged particles next to each other and thus leads to Coulomb explosion. Kinetic energy distribution of the ionic fragments gives information on the dynamics of the decay process. From the theoretical point of view general quantum mechanical equations for describing the decay processes and the subsequent fragmentations are known but are only applicable for rather small systems. During the presentation, a semiclassical approach for modeling ICD and the subsequent fragmentations will be presented. This approach involves a classical treatment for the nuclear motion while retaining a quantum description for the electron dynamics. Such approach has low computational costs and can be used to study much larger systems. Comparison of the results from semiclassical and from quantum mechanical calculations will be shown for simple systems, demonstrating the good performance of the semiclassical method. Results on ICD in nanodroplets will finally be reported.

  12. Rare B decays at CDF

    SciTech Connect

    Farrington, Sinead M.; /Liverpool U.

    2006-10-01

    The confidence level limits of the CDF search for the B{sub s}{sup 0} and B{sub d}{sup 0} {yields} {mu}{sup +}{mu}{sup -} rare decays and the branching ratio measurement of B{sub s}{sup 0} {yields} D{sub s}{sup +} D{sub s}{sup -} are presented.

  13. Review of tau lepton decays

    SciTech Connect

    Stoker, D.P.

    1991-07-01

    Measurements of the {tau} decay modes are reviewed and compared with the predictions of the Standard Model. While the agreement is generally good, the status of the 1-prong puzzle'' remains controversial and a discrepancy between the measured leptonic branching fractions and the {tau} lifetime persists. Prospects for precision measurements at a Tau-Charm Factory are also reviewed. 20 refs., 2 tabs.

  14. Fermi's β-DECAY Theory

    NASA Astrophysics Data System (ADS)

    Yang, Chen Ning

    2013-05-01

    Throughout his lifetime Enrico Fermi (1901-1954) had considered his 1934 β-decay theory as his most important contribution to theoretical physics. E. Segrè (1905-1989) had vividly written about an episode at the inception of that paper:1...

  15. FDCSUSYDecay: An MSSM decay package

    NASA Astrophysics Data System (ADS)

    Qi, Wei; Wang, Jian-xiong

    2007-08-01

    FDCSUSYDecay is a FORTRAN program package generated by FDC (Feynman Diagram Calculation) system fully automatically. It is dedicated to calculate at tree-level all the possible 2-body decays of SUSY and Higgs particles in the Minimal Supersymmetric extension of the Standard Model (MSSM). The format of its output files complies with SUSY Les Houches Accord and can be easily imported by other packages. Program summaryManuscript title:FDCSUSYDecay: An MSSM decay package Authors:Wei Qi, Jian-xiong Wang Program title:FDCSUSYDecay (Version 1.00) Catalogue identifier:ADYV_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/ADYV_v1_0.html Program obtainable from:CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions:Standard CPC licence, http://cpc.cs.qub.ac.uk/licence/licence.html No. of lines in distributed program, including test data, etc.:22 008 No. of bytes in distributed program, including test data, etc.:622 751 Distribution format:tar.gz Programming language:FORTRAN 77 Operating system:Linux Keywords:SUSY decay, MSSM, FDC PACS:02.70.-c, 12.60.Jv Classification:11.1, 11.6 External routines:CERNLIB 2003 (or up) Nature of problem: This package can calculate all the possible SUSY particle and Higgs 2-body decay width and branch ratio at tree-level in the MSSM model. Solution method: By running FDC, the Feynman rules for the MSSM model are generated, all the decay widths are calculated analytically and corresponding FORTRAN codes are generated for this package. Running time: Less than 1 second for both high-scale and low-scale modes on a Pentium IV 2.4 GHz machine (512 MB memory).

  16. Maxillary fungus ball: zinc-oxide endodontic materials as a risk factor.

    PubMed

    Nicolai, P; Mensi, M; Marsili, F; Piccioni, M; Salgarello, S; Gilberti, E; Apostoli, P

    2015-04-01

    The objective of this study was to demonstrate the correlation between endodontic treatment on maxillary teeth and fungus ball with inductively coupled plasma mass spectrometry measurement of zinc and other metals (barium, lead and copper) in fungus ball samples. Samples of normal maxillary mucosa were used as comparison. Metal concentration was also measured in several endodontic materials. A significant difference was found between the concentration of zinc and copper in fungus ball compared to normal mucosa. Metal distribution was more similar in fungus ball and in the endodontic materials tested than normal mucosa. The similar metal concentration in the endodontic materials and fungus ball suggests that endodontic materials play a role in the pathogenesis of fungus ball. Endodontic materials accidentally pushed into the maxillary sinus during endodontic treatments may play a crucial role. Dentists should be as careful as possible when treating maxillary teeth to avoid perforating the maxillary sinus floor; the use of zinc-free endodontic materials, as zinc is a metal that plays a pivotal role in fungus growth, should be encouraged.

  17. A role for antioxidants in acclimation of marine derived pathogenic fungus (NIOCC 1) to salt stress.

    PubMed

    Ravindran, Chinnarajan; Varatharajan, Govindaswamy R; Rajasabapathy, Raju; Vijayakanth, S; Kumar, Alagu Harish; Meena, Ram M

    2012-09-01

    Salinity tolerance a key factor helps in understanding the ionic homeostasis in general, which is a fundamental cellular phenomenon in all living cells. Here, a marine derived pathogenic fungus was examined for its adaptation under salt stress using antioxidant properties. The aqueous extracts of halophilic fungus exhibited different levels of antioxidant activity in all the in vitro tests such as α,α-diphenyl-β-picrylhydrazyl (DPPH(·)), Hydroxyl Radical Scavenging Assay (HRSA), Metal chelating assay and β-carotene-linoleic acid model system. The antioxidant capacity of marine fungus exposed to high salt condition showed an increase in activity. In addition, the production of intra and extracellular antioxidant enzymes of the fungus at various salt stresses were analyzed and discussed for their possible role in the stress mechanism. The marine derived fungus was identified as Phialosimplex genus, which is associated with infections in dogs. Thus the present study elucidates that the scavenging activity is one of the protective mechanisms developed in the fungus to avoid the deleterious effect of salt stress. In addition, the study also helps in understanding how the pathogenic fungus tackles the oxidative burst i.e. hypersensitivity reaction performed by host to kill the pathogens. PMID:22809619

  18. The invasive chytrid fungus of amphibians paralyzes lymphocyte responses.

    PubMed

    Fites, J Scott; Ramsey, Jeremy P; Holden, Whitney M; Collier, Sarah P; Sutherland, Danica M; Reinert, Laura K; Gayek, A Sophia; Dermody, Terence S; Aune, Thomas M; Oswald-Richter, Kyra; Rollins-Smith, Louise A

    2013-10-18

    The chytrid fungus, Batrachochytrium dendrobatidis, causes chytridiomycosis and is a major contributor to global amphibian declines. Although amphibians have robust immune defenses, clearance of this pathogen is impaired. Because inhibition of host immunity is a common survival strategy of pathogenic fungi, we hypothesized that B. dendrobatidis evades clearance by inhibiting immune functions. We found that B. dendrobatidis cells and supernatants impaired lymphocyte proliferation and induced apoptosis; however, fungal recognition and phagocytosis by macrophages and neutrophils was not impaired. Fungal inhibitory factors were resistant to heat, acid, and protease. Their production was absent in zoospores and reduced by nikkomycin Z, suggesting that they may be components of the cell wall. Evasion of host immunity may explain why this pathogen has devastated amphibian populations worldwide.

  19. A new cytotoxic cytochalasin from the endophytic fungus Trichoderma harzianum.

    PubMed

    Chen, Huiqin; Daletos, Georgios; Okoye, Festus; Lai, Daowan; Dai, Haofu; Proksch, Peter

    2015-04-01

    The new natural product 4]-hydroxy-deacetyl-18-deoxycytochalasin H (1), together with the known deacetyl-18-deoxycytochalasin H (2) and 18-deoxycytochalasin H (3) were obtained from the endophytic fungus Trichoderma harzianum isolated from leaves of Cola nitida. The structure of the new compound was unambiguously determined by 1D and 2D NMR spectroscopy, and by HRESIMS measurements, as well as by comparison with the literature. Compounds 1-3 showed potent cytotoxic activity against the murine lymphoma (L5178Y) cell line and against human ovarian cancer (A2780 sens and A2780 CisR) cell lines (IC50 0.19-6.97 µM). The A2780 cell lines included cisplatin-sensitive (sens) and -resistant (R) cells. PMID:25973482

  20. Molecular Karyotype of the White Rot Fungus Pleurotus ostreatus

    PubMed Central

    Larraya, Luis M.; Pérez, Gumer; Peñas, María M.; Baars, Johan J. P.; Mikosch, Thomas S. P.; Pisabarro, Antonio G.; Ramírez, Lucía

    1999-01-01

    The white rot fungus Pleurotus ostreatus is an edible basidiomycete with increasing agricultural and biotechnological importance. Genetic manipulation and breeding of this organism are restricted because of the lack of knowledge about its genomic structure. In this study, we analyzed the genomic constitution of P. ostreatus by using pulsed-field gel electrophoresis optimized for the separation of its chromosomes. We have determined that it contains 11 pairs of chromosomes with sizes ranging from 1.4 to 4.7 Mbp. In addition to chromosome separation, the use of single-copy DNA probes allowed us to resolve the ambiguities caused by chromosome comigration. When the two nuclei present in the dikaryon were separated by protoplasting, analysis of their karyotypes revealed length polymorphisms affecting various chromosomes. This is, to our knowledge, the clearest chromosome separation available for this species. PMID:10427028

  1. Amphibian chytrid fungus Batrachochytrium dendrobatidis in Cusuco National Park, Honduras.

    PubMed

    Kolby, Jonathan E; Padgett-Flohr, Gretchen E; Field, Richard

    2010-11-01

    Amphibian population declines in Honduras have long been attributed to habitat degradation and pollution, but an increasing number of declines are now being observed from within the boundaries of national parks in pristine montane environments. The amphibian chytrid fungus Batrachochytrium dendrobatidis has been implicated in these declines and was recently documented in Honduras from samples collected in Pico Bonito National Park in 2003. This report now confirms Cusuco National Park, a protected cloud forest reserve with reported amphibian declines, to be the second known site of infection for Honduras. B. dendrobatidis infection was detected in 5 amphibian species: Craugastor rostralis, Duellmanohyla soralia, Lithobates maculata, Plectrohyla dasypus, and Ptychohyla hypomykter. D. soralia, P. dasypus, and P. hypomykter are listed as critically endangered in the IUCN Red List of Threatened Species and have severely fragmented or restricted distributions. Further investigations are necessary to determine whether observed infection levels indicate an active B. dendrobatidis epizootic with the potential to cause further population declines and extinction.

  2. Cadmium-responsive thiols in the ectomycorrhizal fungus Paxillus involutus.

    PubMed

    Courbot, Mikael; Diez, Laurent; Ruotolo, Roberta; Chalot, Michel; Leroy, Pierre

    2004-12-01

    Molecular and cellular mechanisms underlying the sustained metal tolerance of ectomycorrhizal fungi are largely unknown. Some of the main mechanisms involved in metal detoxification appear to involve the chelation of metal ions in the cytosol with thiol-containing compounds, such as glutathione, phytochelatins, or metallothioneins. We used an improved high-performance liquid chromatography method for the simultaneous measurement of thiol-containing compounds from cysteine and its derivatives (gamma-glutamylcysteine, glutathione) to higher-molecular-mass compounds (phytochelatins). We found that glutathione and gamma-glutamylcysteine contents increased when the ectomycorrhizal fungus Paxillus involutus was exposed to cadmium. An additional compound with a 3-kDa molecular mass, most probably related to a metallothionein, increased drastically in mycelia exposed to cadmium. The relative lack of phytochelatins and the presence of a putative metallothionein suggest that ectomycorrhizal fungi may use a different means to tolerate heavy metals, such as Cd, than do their plant hosts. PMID:15574943

  3. Steroids and Sesquiterpenes From Cultures of the Fungus Phellinus igniarius.

    PubMed

    Yin, Rong-Hua; Zhao, Zhen-Zhu; Ji, Xu; Dong, Ze-Jun; Li, Zheng-Hui; Feng, Tao; Liu, Ji-Kai

    2014-11-29

    Two new steroids, 3α,17α,19,20-tetrahydroxy-4α-methylpregn-8-ene (1) and 3α,12α,17α,20-tetrahydroxy-4α-methylpregn-8-ene (2) and three new sesquiterpenoids, 12-hydroxy-α-cadinol (3), 3α,12-dihydroxy-δ-cadinol (4), and 3α,6α-dihydroxyspiroax-4-ene (5), have been isolated from cultures of the fungus Phellinus igniarius. Their structures were characterized based on extensive spectroscopic data. In preliminary in vitro assays, compounds 3 and 4 exhibited the vascular-activities against phenylephrine-induced vasoconstriction with the relaxing rates of 11.0 % and 7.0 % at 3 × 10(-4) M, respectively. PMID:25432445

  4. Identification of Oxaphenalenone Ketals from the Ascomycete Fungus Neonectria sp.

    PubMed

    Ren, Jinwei; Niu, Shubing; Li, Li; Geng, Zhufeng; Liu, Xingzhong; Che, Yongsheng

    2015-06-26

    Neonectrolides B-E (4-7), four new oxaphenalenone ketals incorporating the new furo[2,3-b]isochromeno[3,4,5-def]chromen-11(6aH)-one skeleton, were isolated from the fermentation extract of the ascomycete fungus Neonectria sp. in an in-depth investigation guided by HPLC fingerprint and a cytotoxicity assay. The previously identified oxaphenalenone spiroketal neonectrolide A (1) and its putative biosynthetic precursors (2 and 3) were also reisolated in the current work. The structures of 4-7 were primarily elucidated by interpretation of NMR spectroscopic data, and the absolute configurations were deduced by electronic circular dichroism calculations. Compound 6 showed cytotoxic effects against four of the six human tumor cell lines tested. Biosynthetically, compounds 4-7 could be derived via the Diels-Alder reaction cascades starting from derivatives of the co-isolated metabolites 2 and 3. PMID:25978132

  5. Butenolide derivatives from the plant endophytic fungus Aspergillus terreus.

    PubMed

    Guo, Feng; Li, Zhanlin; Xu, Xiangwei; Wang, Kaibo; Shao, Meili; Zhao, Feng; Wang, Haifeng; Hua, Huiming; Pei, Yuehu; Bai, Jiao

    2016-09-01

    Three new butenolides containing 5-hydroxyfuran-2(5H)-one core, asperteretal A (1), asperteretal B (2), and asperteretal C (3), together with seven known butenolides (4-10), were obtained from an endophytic fungus Aspergillus terreus PR-P-2 isolated from the plant Camellia sinensis var. assamica. The structures of compounds 1-3 were elucidated on the basis of detailed spectroscopic analysis including UV, IR, HRESIMS, 1D and 2D NMR, and ECD spectra. Compounds 1, 3, 5 and 6-8 showed potent inhibitory effects on NO production in RAW 264.7 lipopolysaccharide-induced macrophages, and compounds 5 and 8 also exhibited moderate cytotoxicity against HL-60 cell line. PMID:27370101

  6. Garden sharing and garden stealing in fungus-growing ants

    NASA Astrophysics Data System (ADS)

    Adams, Rachelle M. M.; Mueller, U. G.; Holloway, Alisha K.; Green, Abigail M.; Narozniak, Joanie

    Fungi cultivated by fungus-growing ants (Attini: Formicidae) are passed on between generations by transfer from maternal to offspring nest (vertical transmission within ant species). However, recent phylogenetic analyses revealed that cultivars are occasionally also transferred between attine species. The reasons for such lateral cultivar transfers are unknown. To investigate whether garden loss may induce ants to obtain a replacement cultivar from a neighboring colony (lateral cultivar transfer), pairs of queenright colonies of two Cyphomyrmex species were set up in two conjoined chambers; the garden of one colony was then removed to simulate the total crop loss that occurs naturally when pathogens devastate gardens. Garden-deprived colonies regained cultivars through one of three mechanisms: joining of a neighboring colony and cooperation in a common garden; stealing of a neighbor's garden; or aggressive usurpation of a neighbor's garden. Because pathogens frequently devastate attine gardens under natural conditions, garden joining, stealing and usurpation emerge as critical behavioral adaptations to survive garden catastrophes.

  7. [Extracellular proteinases from the phytopathogenic fungus Fusarium culmorum].

    PubMed

    Ievleva, E V; Revina, T A; Kudriavtseva, N N; Sof'in, A V; Valueva, T A

    2006-01-01

    The growth of Fusarium culmorum fungus on a medium containing thermostable proteins from potato tubers was accompanied by the production of proteinases, exhibiting activity over a broad pH range (from 6.0-10.0). When studied by SDS-PAGE in the presence of beta-mercaptoethanol, extracellular proteinases were represented by at least five species with a molecular weight of 30-60 kDa. Inhibitor analysis and studies of enzyme activities with synthetic substrates demonstrated that the culture liquid of Fusarium culmorum contained serine proteinases of various classes. The amount of subtilisin-like proteinases was the highest. A near-complete inhibition of the enzymes was caused by proteinaceous proteinase inhibitors from potato tubers. These data suggest that proteinases of the phytopathogen Fusarium culmorum serve as a metabolic target for natural inhibitors of potato proteinases.

  8. Developmental modulation of DNA methylation in the fungus Phycomyces blakesleeanus.

    PubMed Central

    Antequera, F; Tamame, M; Vilanueva, J R; Santos, T

    1985-01-01

    DNA methylation is a rather sparse event among fungi. Phycomyces blakesleeanus seems to be one of the few exceptions in this context. 5-Methylcytosine represents 2.9% of the total cytosine in spore DNA and is located in approximately the same amount at any of the four CA, CT, CC or CG dinucleotides. A progressive and gradual drop in total 5-methylcytosine parallels the development of the fungus. This demethylation is non random but sequence specific and is not accounted for equally by the four different methylated dinucleotides, CG being much less affected (20% demethylated) than CA, CT and CC (more than 90% demethylated at the same time). "De novo" methylation to restore the initial pattern probably takes place during spore maturation. By using specific hybridization probes we have been able to show that the rRNA genes are not significantly methylated at any stage of development, regardless of their transcription status. Images PMID:2997714

  9. Three oxygenated cyclohexenone derivatives produced by an endophytic fungus.

    PubMed

    Shiono, Yoshihito; Murayama, Tetsuya; Takahashi, Koetsu; Okada, Katsuhide; Katohda, Shigeyoshi; Ikeda, Michimasa

    2005-02-01

    Three cyclohexenone derivatives, (4S,5S,6S)-5,6-epoxy-4-hydroxy-3-methoxy-5-methyl-cyclohex-2-en-1-one (1), (4R,5R)-4,5-dihydroxy-3-methoxy-5-methyl-cyclohex-2-en-1-one (2), and (4R,5S,6R)-4,5,6-trihydroxy-3-methoxy-5-methyl-cyclohex-2-en-1-one (3), were isolated from unpolished rice fermented with an xylariaceous endophytic fungus (strain YUA-026). The structures of three compounds were established on the basis of spectroscopic analyses and chemical conversion. The minimum inhibitory concentrations of 1 and 3 were 100 microg/ml and 400 microg/ml against Staphylococcus aureus, 100 microg/ml and 200 microg/ml against Pseudomonas aeruginosa, and 200 microg/ml and >400 microg/ml against Candida albicans, respectively. In addition, 1 and 3 exhibited phytotoxic activity against lettuce. PMID:15725652

  10. Two new triterpenoids from fruiting bodies of fungus Ganoderma lucidum.

    PubMed

    Zhao, Zhen-Zhu; Yin, Rong-Hua; Chen, He-Ping; Feng, Tao; Li, Zheng-Hui; Dong, Ze-Jun; Cui, Bao-Kai; Liu, Ji-Kai

    2015-01-01

    Two new triterpenoids, (24E)-9α,11α-epoxy-3β-hydroxylanosta-7,24-dien-26-al (1) and (22Z,24Z)-13-hydroxy-3-oxo-14(13 → 12)abeo-lanosta-8,22,24-trien-26,23-olide (2) were isolated from dried fruiting bodies of fungus Ganoderma lucidum. The structures of these two new compounds were elucidated on the basis of extensive spectroscopic analyses. Compound 1 possessed a lanostane skeleton, while compound 2 was based on a rare 14 (13 → 12)abeo-lanostane skeleton with a 26,23-olide moiety. Both of them were evaluated for their antifungal and cytotoxic activities. Neither of them displayed obvious inhibition on Candida albicans and five human cancer cell lines.

  11. Two new compounds from gorgonian-associated fungus Aspergillus sp.

    PubMed

    Xu, Xin-Ya; Zhang, Xiao-Yong; He, Fei; Peng, Jiang; Nong, Xu-Hua; Qi, Shu-Hua

    2013-08-01

    One new gamma-lactone derivative 5-hydroxy-3-isopropyl-4-methoxyfuranone (1) and one new lactam derivative dehydrated-marinamide (2), along with two known compounds marinamide (3) and marinamide methyl ester (4) were isolated from the fermentation broth of the marine gorgonian-associated fungus Aspergillus sp. SCSGAF0093. Their structures were elucidated on the basis of spectroscopic and spectrometric analysis. Compound 1 showed significant toxicity to brine shrimp (Artemia salina) with a median lethal concentration (LC50) of 1.25 microM, and 3 inhibited protein tyrosine phosphatase 1B (PTP1B) with a half maximal inhibitory concentration (IC50) of 23.3 microg/mL.

  12. A new diketopiperazine heterodimer from an endophytic fungus Aspergillus niger.

    PubMed

    Li, Xiao-Bin; Li, Yue-Lan; Zhou, Jin-Chuan; Yuan, Hui-Qing; Wang, Xiao-Ning; Lou, Hong-Xiang

    2015-01-01

    One new diketopiperazine heterodimer, asperazine A (1), and eight known compounds, asperazine (2), cyclo(d-Phe-l-Trp) (3), cyclo(l-Trp-l-Trp) (4), 4-(hydroxymethyl)-5,6-dihydro-pyran-2-one (5), walterolactone A (6), and campyrones A-C (7-9), were isolated from an endophytic fungus Aspergillus niger. Their structures were determined unequivocally on the basis of extensive spectroscopic data analysis. This is the first report of the presence of compound 3 as a natural product. Cytotoxicity test against human cancer cell lines PC3, A2780, K562, MBA-MD-231, and NCI-H1688 revealed that compounds 1 and 2 had weak activities.

  13. Chemically armed mercenary ants protect fungus-farming societies.

    PubMed

    Adams, Rachelle M M; Liberti, Joanito; Illum, Anders A; Jones, Tappey H; Nash, David R; Boomsma, Jacobus J

    2013-09-24

    The ants are extraordinary in having evolved many lineages that exploit closely related ant societies as social parasites, but social parasitism by distantly related ants is rare. Here we document the interaction dynamics among a Sericomyrmex fungus-growing ant host, a permanently associated parasitic guest ant of the genus Megalomyrmex, and a raiding agro-predator of the genus Gnamptogenys. We show experimentally that the guest ants protect their host colonies against agro-predator raids using alkaloid venom that is much more potent than the biting defenses of the host ants. Relatively few guest ants are sufficient to kill raiders that invariably exterminate host nests without a cohabiting guest ant colony. We also show that the odor of guest ants discourages raider scouts from recruiting nestmates to host colonies. Our results imply that Sericomyrmex fungus-growers obtain a net benefit from their costly guest ants behaving as a functional soldier caste to meet lethal threats from agro-predator raiders. The fundamentally different life histories of the agro-predators and guest ants appear to facilitate their coexistence in a negative frequency-dependent manner. Because a guest ant colony is committed for life to a single host colony, the guests would harm their own interests by not defending the host that they continue to exploit. This conditional mutualism is analogous to chronic sickle cell anemia enhancing the resistance to malaria and to episodes in human history when mercenary city defenders offered either net benefits or imposed net costs, depending on the level of threat from invading armies.

  14. Gaussian Confinement in a Jkj Decay Model

    NASA Astrophysics Data System (ADS)

    da Silva, Mario L. L.; Hadjimichef, Dimiter; Vasconcellos, Cesar A. Z.

    In microscopic decay models, one attempts to describe hadron strong decays in terms of quark and gluon degrees of freedom. We begin by assuming that strong decays are driven by the same interquark Hamiltonian which determines the spectrum, and that it incorporates gaussian confinement. An A → BC decay matrix element of the JKJ Hamiltonian involves a pair-production current matrix elements times a scatering matrix element. Diagrammatically this corresponds to an interaction between an initial line and produced pair.

  15. Review of J//psi/ decays

    SciTech Connect

    Toki, W.H.

    1988-11-01

    Recent results from the Mark III collaboration in radiative J//psi/ decays are presented. This includes a study of iota/E decays in J//psi/ el/eta/ and elelp, two pseudoscalar decays near threshold in J//psi/ el and el /bar K/K and two vector decays in J//psi/ el /bar K//sup o/*K/sup o/*. 20 refs., 9 figs.

  16. Double beta decay: A theoretical overview

    SciTech Connect

    Rosen, S.P.

    1988-01-01

    This paper reviews the theoretical possibility of double beta decay. The titles of the main sections of this paper are: Nuclear physics setting; Particle physics requirements; Kinematical features of the decay modes; Nuclear matrix elements; the Shell model and two-neutrino decay; Quasi-particle random phase approximation; and Future considerations. 18 refs., 7 tabs. (LSP)

  17. Weak radiative baryonic decays of B mesons

    SciTech Connect

    Kohara, Yoji

    2004-11-01

    Weak radiative baryonic B decays B{yields}B{sub 1}B{sub 2}-bar{gamma} are studied under the assumption of the short-distance b{yields}s{gamma} electromagnetic penguin transition dominance. The relations among the decay rates of various decay modes are derived.

  18. Penguin and rare decays in BABAR

    NASA Astrophysics Data System (ADS)

    Akar, Simon; Babar Collaboration

    2014-11-01

    We present recent results from the BABAR Collaboration on radiative decays. These include searches for new physics via measurements of several observables such as the time- dependent CP asymmetry in B0 → K0Sπ-π+γ exclusive decays, as well as direct CP asymmetries and branching fractions in B → Xsγ and B → Xsl+l- inclusive decays.

  19. Beauty baryon decays: a theoretical overview

    NASA Astrophysics Data System (ADS)

    Wang, Yu-Ming

    2014-11-01

    I overview the theoretical status and recent progress on the calculations of beauty baryon decays focusing on the QCD aspects of the exclusive semi-leptonic Λb → plμ decay at large recoil and theoretical challenges of radiative and electro-weak penguin decays Λb → Λγ,Λl+l-.

  20. Recent results on semileptonic decays at BABAR

    NASA Astrophysics Data System (ADS)

    Serrano, J.; Babar Collaboration

    2009-01-01

    Some recent BABAR results on semileptonic decays are presented. They focus on the determination of the CKM matrix elements |V| and |V| in inclusive and exclusive b→uℓν and b→cℓν decays, and on form factors measurement in exclusive c→sℓν decays.

  1. Review of B and Bs decays

    NASA Astrophysics Data System (ADS)

    Bozzi, Concezio

    2014-05-01

    A review of B and Bs decays is presented. Emphasis is given to processes most sensitive to physics beyond the Standard Model, such as radiative, electroweak and "Higgs" penguin decays, and tree-level decays involving tau leptons in the final state. An outlook on future perspectives is also given.

  2. [Scytalidium dimidiatum an opportunistic fungus for both man and Mangifera indica trees in Venezuela].

    PubMed

    Padin, Carmiña; Fernández-Zeppenfeldt, Guillermo; Yegres, Francisco; Richard-Yegres, Nicole

    2005-09-01

    The purpose of this study was to confirm the presence of Scytalidium dimidiatum on Mangifera indica (mango) trees, in a plantation managed by a diabetic patient with a white grain mycetoma of the foot caused by the same fungus. Samples from necrotic apices, roots, burned leaves and rotten stems from eight trees were processed by the Smith and Furcolow's mineral oil technique (modified). Several isolates from the apex material and clinical samples from the diabetic patient isolated in pure culture a fungus with the macroscopic and microscopic characteristics of that in S. dimidiatum. This fungus should be considered as an opportunistic microorganism for both humans and M. indica.

  3. Bioremediation with white rot fungus. (Latest citations from Pollution Abstracts database). Published Search

    SciTech Connect

    Not Available

    1993-10-01

    The bibliography contains citations concerning the use of white rot fungus to degrade a variety of hazardous materials. The citations examine the application of the fungus to the remediation of petroleum hydrocarbons, polychlorinated biphenyls, 2,4,6-trinitrotoluene (TNT), pentachlorophenol, herbicides, insecticides, and other environmentally persistent organic compounds. The results of laboratory and field studies are presented. The use of white rot fungus in biological pulping and delignification is also discussed. (Contains a minimum of 50 citations and includes a subject term index and title list.)

  4. Biological Control of Yellow Nutsedge with the Indigenous Rust Fungus Puccinia canaliculata.

    PubMed

    Phatak, S C; Sumner, D R; Wells, H D; Bell, D K; Glaze, N C

    1983-03-25

    Yellow nutsedge (Cyperus esculentus L.) is a serious weed problem in the United States and other countries. An indigenous rust fungus [Puccinia canaliculata (Schw.) Lagerh.], pathogenic on yellow nutsedge, was released in early spring as a potential biological control agent. The fungus inhibited nutsedge flowering and new tuber formation. The fungus also dehydrated and killed nutsedge plants. The successful control of yellow nutsedge by a rust epiphytotic under experimental conditions demonstrates the potential use of the rust in an integrated weed management system. PMID:17735196

  5. Involutin Is an Fe3+ Reductant Secreted by the Ectomycorrhizal Fungus Paxillus involutus during Fenton-Based Decomposition of Organic Matter

    PubMed Central

    Schwenk, Daniel; Nicolás, César; Persson, Per; Hoffmeister, Dirk; Tunlid, Anders

    2015-01-01

    Ectomycorrhizal fungi play a key role in mobilizing nutrients embedded in recalcitrant organic matter complexes, thereby increasing nutrient accessibility to the host plant. Recent studies have shown that during the assimilation of nutrients, the ectomycorrhizal fungus Paxillus involutus decomposes organic matter using an oxidative mechanism involving Fenton chemistry (Fe2+ + H2O2 + H+ → Fe3+ + ˙OH + H2O), similar to that of brown rot wood-decaying fungi. In such fungi, secreted metabolites are one of the components that drive one-electron reductions of Fe3+ and O2, generating Fenton chemistry reagents. Here we investigated whether such a mechanism is also implemented by P. involutus during organic matter decomposition. Activity-guided purification was performed to isolate the Fe3+-reducing principle secreted by P. involutus during growth on a maize compost extract. The Fe3+-reducing activity correlated with the presence of one compound. Mass spectrometry and nuclear magnetic resonance (NMR) identified this compound as the diarylcyclopentenone involutin. A major part of the involutin produced by P. involutus during organic matter decomposition was secreted into the medium, and the metabolite was not detected when the fungus was grown on a mineral nutrient medium. We also demonstrated that in the presence of H2O2, involutin has the capacity to drive an in vitro Fenton reaction via Fe3+ reduction. Our results show that the mechanism for the reduction of Fe3+ and the generation of hydroxyl radicals via Fenton chemistry by ectomycorrhizal fungi during organic matter decomposition is similar to that employed by the evolutionarily related brown rot saprotrophs during wood decay. PMID:26431968

  6. Decay data evaluation project (DDEP): updated evaluations of the 233Th and 241Am decay characteristics.

    PubMed

    Chechev, Valery P; Kuzmenko, Nikolay K

    2010-01-01

    The results of new decay data evaluations are presented for (233)Th (beta(-)) decay to nuclear levels in (233)Pa and (241)Am (alpha) decay to nuclear levels in (237)Np. These evaluated data have been obtained within the Decay Data Evaluation Project using information published up to 2009.

  7. Decay Data Evaluation Project (DDEP): evaluation of the main 243Cm and 245Cm decay characteristics.

    PubMed

    Chechev, Valery P

    2012-09-01

    The results of new decay data evaluations are presented for (243)Cm (α) decay to nuclear levels in (239)Pu and (245)Cm (α) decay to nuclear levels in (241)Pu. These evaluated data have been obtained within the Decay Data Evaluation Project using information published up to 2011.

  8. Form factors and decay rate of Bc * Dsl+l- decays in the QCD sum rules

    NASA Astrophysics Data System (ADS)

    Zeynali, K.; Bashiry, V.; Zolfagharpour, F.

    2014-08-01

    Rare exclusive decays are analyzed in the framework of the three-point QCD sum rules approach. The two-gluon condensate corrections to the correlation function are included and the form factors of this transition are evaluated. Using the form factors, the decay width and integrated decay rate for these decays are also calculated.

  9. Lyapunov decay in quantum irreversibility.

    PubMed

    García-Mata, Ignacio; Roncaglia, Augusto J; Wisniacki, Diego A

    2016-06-13

    The Loschmidt echo--also known as fidelity--is a very useful tool to study irreversibility in quantum mechanics due to perturbations or imperfections. Many different regimes, as a function of time and strength of the perturbation, have been identified. For chaotic systems, there is a range of perturbation strengths where the decay of the Loschmidt echo is perturbation independent, and given by the classical Lyapunov exponent. But observation of the Lyapunov decay depends strongly on the type of initial state upon which an average is carried out. This dependence can be removed by averaging the fidelity over the Haar measure, and the Lyapunov regime is recovered, as has been shown for quantum maps. In this work, we introduce an analogous quantity for systems with infinite dimensional Hilbert space, in particular the quantum stadium billiard, and we show clearly the universality of the Lyapunov regime. PMID:27140966

  10. Decays of the tau lepton

    SciTech Connect

    Burchat, P.R.

    1986-02-01

    Previous measurements of the branching fractions of the tau lepton result in a discrepancy between the inclusive branching fraction and the sum of the exclusive branching fractions to final states containing one charged particle. The sum of the exclusive branching fractions is significantly smaller than the inclusive branching fraction. In this analysis, the branching fractions for all the major decay modes are measured simultaneously with the sum of the branching fractions constrained to be one. The branching fractions are measured using an unbiased sample of tau decays, with little background, selected from 207 pb/sup -1/ of data accumulated with the Mark II detector at the PEP e/sup +/e/sup -/ storage ring. The sample is selected using the decay products of one member of the ..gamma../sup +/..gamma../sup -/ pair produced in e/sup +/e/sup -/ annihilation to identify the event and then including the opposite member of the pair in the sample. The sample is divided into subgroups according to charged and neutral particle multiplicity, and charged particle identification. The branching fractions are simultaneously measured using an unfold technique and a maximum likelihood fit. The results of this analysis indicate that the discrepancy found in previous experiments is possibly due to two sources. First, the leptonic branching fractions measured in this analysis are about one standard deviation higher than the world average. The measured leptonic branching fractions correspond to a tau lifetime of (3.0 +- 0.2) x 10/sup -13/ s. Secondly, the total branching fraction to one charged hadron plus at least one neutral particle is measured to be (7 +- 3)% higher than the branching fraction expected from a combination of previous measurements and theoretical predictions. It is shown that decay modes involving the eta are not expected to contribute more than 3% to this excess.

  11. Optical spectroscopy and tooth decay

    NASA Astrophysics Data System (ADS)

    Misra, P.; De, T.; Singh, R.

    2005-11-01

    Optical spectroscopy in the ultraviolet, visible and mid-infrared spectral regions has been used to discriminate between healthy and diseased teeth of patients in the age range 15-75 years. Spectral scans of absorbance versus wavenumber and fluorescence intensity versus wavelength have been recorded and investigated for caries and periodontal disease. Such optical diagnostics can prove very useful in the early detection and treatment of tooth decay.

  12. Nuclear structure from radioactive decay

    SciTech Connect

    Wood, J.L.

    1991-09-30

    This report discusses nuclear structure from radioactive decay of the following: Neutron-Deficient Iridium Isotopes; Neutron-Deficient Platinum Isotopes; Neutron-Deficient Gold Isotopes; Neutron-Deficient Mercury Isotopes; Neutron-Deficient Thallium Isotopes; Neutron-Deficient Lead Isotopes; Neutron-Deficient Samarium Isotopes; Neutron-Deficient Promethium Isotopes; Neutron-Deficient Neodymium Isotopes; and Neutron-Deficient Praseodymium Isotopes. Also discussed are Nuclear Systematics and Models.

  13. Nuclear Decay Data: On-going Studies to Address and Improve Radionuclide Decay Characteristics

    NASA Astrophysics Data System (ADS)

    Nichols, Alan L.

    2005-05-01

    Representative decay data studies are described and reviewed, ranging from various measurement programmes to the maintenance of evaluated decay-data libraries. Gross beta-decay measurements are essential to address the decay-data requirements for short-lived fission products, well-defined half-lives are required in assessments of the storage of long-lived radionuclides in waste depositories, and improved decay data continue to be demanded in safeguards, to improve detector-calibration standards, and for medical and analytical applications. Such needs require the measurement of good quality decay data, along with multinational evaluations of decay schemes by means of agreed procedures.

  14. Radiative decay of nonstationary system.

    PubMed

    Banerjee, Sumana; Gangopadhyay, Gautam

    2004-04-01

    When a finite quantum system, say a fluorescent molecule is attached to a bulk surface and excited by a short laser pulse, the decay dynamics of the system is modulated by the surface and the signal is enhanced due to the bulk surface. We have considered the decay dynamics of a model of displaced distorted molecule whose excited potential surface is coupled to a continuum and then this first continuum is in turn coupled to a second continuum. In the short time scale there is a coherent exchange of energy between the system molecule and the first continuum states. In the long time scale the energy of the whole system plus first continuum drains out to the final continuum states. A dendrimer nanocomposite with the gold surface shows an enhanced light emission. This can be qualitatively understood from the model we proposed here. We have numerically studied the various potential parameters of the molecule which can affect the signal. When the potential surfaces are flat, the band structure of the first continuum states along with its initial excitation has some nontrivial effect on the profile of the radiative decay. PMID:15267501

  15. Diversity and structure of bacterial communities associated with Phanerochaete chrysosporium during wood decay.

    PubMed

    Hervé, Vincent; Le Roux, Xavier; Uroz, Stéphane; Gelhaye, Eric; Frey-Klett, Pascale

    2014-07-01

    Wood recycling is key to forest biogeochemical cycles, largely driven by microorganisms such as white-rot fungi which naturally coexist with bacteria in the environment. We have tested whether and to what extent the diversity of the bacterial community associated with wood decay is determined by wood and/or by white-rot fungus Phanerochaete chrysosporium. We combined a microcosm approach with an enrichment procedure, using beech sawdust inoculated with or without P.chrysosporium. During 18 weeks, we used 16S rRNA gene-based pyrosequencing to monitor the forest bacterial community inoculated into these microcosms. We found bacterial communities associated with wood to be substantially less diverse than the initial forest soil inoculum. The presence of most bacterial operational taxonomic units (OTUs) varied over time and between replicates, regardless of their treatment, suggestive of the stochastic processes. However, we observed two OTUs belonging to Xanthomonadaceae and Rhizobium, together representing 50% of the relative bacterial abundance, as consistently associated with the wood substrate, regardless of fungal presence. Moreover, after 12 weeks, the bacterial community composition based on relative abundance was significantly modified by the presence of the white-rot fungus. Effectively, members of the Burkholderia genus were always associated with P.chrysosporium, representing potential taxonomic bioindicators of the white-rot mycosphere. PMID:24286477

  16. Virus community dynamics in the conifer pathogenic fungus Heterobasidion parviporum following an artificial introduction of a partitivirus.

    PubMed

    Vainio, Eeva J; Piri, Tuula; Hantula, Jarkko

    2013-01-01

    Viruses infecting the conifer pathogenic fungus Heterobasidion annosum sensu lato are intracellular and spread via anastomosis contacts. In the laboratory, these viruses transmit readily even between somatically incompatible isolates, but their dispersal capacity in natural conditions has not been previously studied. We introduced a mycovirus to a heavily diseased forest site by inoculating Norway spruce stumps with heartrot decay using a mycelial suspension of Heterobasidion parviporum strain RT3.49C hosting the partitivirus strain HetRV4-pa1. The Heterobasidion population at the sample plot was screened for mycoviruses prior to and after the inoculation. Based on sequence analysis, the resident H. parviporum strains harbored six different strains of the virus species Heterobasidion RNA virus 6 (HetRV6) and one strain of HetRV4 prior to the inoculation. After three growth seasons, the inoculated H. parviporum host strain was not detected, but the introduced virus had infected two resident H. parviporum genets. The presence of a preexisting HetRV6 infection did not hinder spread of the introduced partitivirus but resulted in coinfections instead. The resident HetRV6 virus population seemed to be highly stable during the incubation period, while the single indigenous HetRV4 infection was not detected after the inoculation. In laboratory infection experiments, the introduced virus could be transmitted successfully into all of the resident H. parviporum genets. This study shows for the first time transmission of a Heterobasidion virus between somatically incompatible hosts in natural conditions.

  17. Three Native Cellulose-Depolymerizing Endoglucanases from Solid-Substrate Cultures of the Brown Rot Fungus Meruliporia (Serpula) incrassata

    PubMed Central

    Kleman-Leyer, Karen M.; Kirk, T. Kent

    1994-01-01

    Three extracellular cellulose-depolymerizing enzymes from cotton undergoing decay by the brown rot fungus Meruliporia (Serpula) incrassata were isolated by anion-exchange and hydrophobic interaction chromatographies. Depolymerization was detected by analyzing the changes in the molecular size distribution of cotton cellulose by high-performance size-exclusion chromatography. The average degree of polymerization (DP; number of glucosyl residues per cellulose chain) was calculated from the size-exclusion chromatography data. The very acidic purified endoglucanases, Cel 25, Cel 49, and Cel 57, were glycosylated and had molecular weights of 25,200, 48,500, and 57,100, respectively. Two, Cel 25 and Cel 49, depolymerized cotton cellulose and were also very active on carboxymethyl cellulose (CMC). Cel 57, by contrast, significantly depolymerized cotton cellulose but did not release reducing sugars from CMC and only very slightly reduced the viscosity of CMC solutions. Molecular size distributions of cotton cellulose attacked by the three endoglucanases revealed single major peaks that shifted to lower DP positions. A second smaller peak (DP, 10 to 20) was also observed in the size-exclusion chromatograms of cotton attacked by Cel 49 and Cel 57. Under the reaction conditions used, Cel 25, the most active of the cellulases, reduced the weight average DP from 3,438 to 315, solubilizing approximately 20% of the cellulose. The weight average DP values of cotton attacked under the same conditions by Cel 49 and Cel 57 were 814 and 534; weight losses were 9 and 11% respectively. Images PMID:16349351

  18. Peniamidienone and penidilamine, plant growth regulators produced by the fungus Penicillium sp. No. 13.

    PubMed

    Kimura, Y; Mizuno, T; Kawano, T; Okada, K; Shimada, A

    2000-04-01

    Peniamidienone and penidilamine were isolated from cultures of the fungus Penicillium sp. No. 13 as new plant growth regulators and their structures were established by NMR spectroscopic studies. Peniamidienone showed weak inhibition of lettuce seedling growth.

  19. Limited transmission of the ectoparasitic fungus Hesperomyces virescens between lady beetles

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The ectoparasitic fungus Hesperomyces virescens Thaxter (Ascomycota: Laboulbeniales) commonly infects the invasive lady beetle Harmonia axyridis (Pallas) and several other aphidophagous lady beetles in North America and Europe. We tested the hypothesis that bodily contact between adults of differen...

  20. Investigating the biology of plant infection by the rice blast fungus Magnaporthe oryzae.

    PubMed

    Martin-Urdiroz, Magdalena; Oses-Ruiz, Miriam; Ryder, Lauren S; Talbot, Nicholas J

    2016-05-01

    The rice blast fungus, Magnaporthe oryzae, is responsible for the most serious disease of rice and is a continuing threat to ensuring global food security. The fungus has also, however, emerged as a model experimental organism for understanding plant infection processes by pathogenic fungi. This is largely due to its amenability to both classical and molecular genetics, coupled with the efforts of a very large international research community. This review, which is based on a plenary presentation at the 28th Fungal Genetics Conference in Asilomar, California in March 2015, describes recent progress in understanding how M. oryzae uses specialised cell called appressoria to bring about plant infection and the underlying biology of this developmental process. We also review how the fungus is then able to proliferate within rice tissue, deploying effector proteins to facilitate its spread by suppressing plant immunity and promoting growth and development of the fungus.

  1. [Alkaloid metabolites of mangrove endophytic fungus ZZF42 from the South China Sea].

    PubMed

    Huang, Zhong-jing; Guo, Zhi-yong; Yang, Rui-yun; She, Zhi-gang; Lin, Yong-cheng

    2007-08-01

    Four compounds, apicidin (1), N-methylharman (2), cylo (Phe-Tyr) (3) and indole-3-acetic acid (4) were isolated from the mangrove endophytic fungus ZZF42 from the South China Sea. Their structures were elucidated by spectral data. Compound 1 was first isolated from the marine fungus. Compound 2 was firstly isolated from marine microorganism. Compound 1 exhibited selective in vitro cytotoxicity towards KB ahd KBv200 with IC50 values of less than 0.78 microg/ml.

  2. Dense fouling in acid transfer pipelines by an acidophilic rubber degrading fungus.

    PubMed

    Joshi, M Hiren; Balamurugan, P; Venugopalan, V P; Rao, T S

    2011-07-01

    An unique case of dense fouling by an acidophilic, hard rubber (polymerized rubber) degrading fungus in the acid transfer pipelines of a boron enrichment plant located at Kalpakkam, India is reported. In spite of a highly adverse environment for survival (pH 1.5, no dissolved nutrients), the fungus thrived and clogged the pipeline used for transferring 0.1N hydrochloric acid (HCl). Detailed investigations were carried out to isolate and identify the fungus and examine the nutrient source for such profuse growth inside the system. Microscopic observation showed the presence of a thick filamentous fungal biomass. Molecular characterization by 18S rRNA gene sequencing showed 98% similarity of the isolate with the acidophilic fungus Bispora sp. In laboratory studies the fungus showed luxuriant growth (specific growth rate of 13 mg day⁻¹) when scrapings of the hard rubber were used as the sole source of carbon. Scanning electron microscopy revealed extensive incursion of the fungus into the hard rubber matrix. In the laboratory, fungal growth was completely inhibited by the antifungal agent sodium omadine. The study illustrates an interesting example of biofouling under extreme conditions and demonstrates that organisms can physiologically adapt to grow under unfavourable conditions, provided that a nutrient source is available and competition is low. The use of this fungal strain in biodegradation and in development of environmentally compatible processes for disposal of rubber wastes is envisaged. PMID:21722066

  3. The fungus gardens of leaf-cutter ants undergo a distinct physiological transition during biomass degradation

    SciTech Connect

    Huang, Eric L.; Aylward, Frank O.; Kim, Young-Mo; Webb-Robertson, Bobbie-Jo M.; Nicora, Carrie D.; Hu, Zeping; Metz, Thomas O.; Lipton, Mary S.; Smith, Richard D.; Currie, Cameron R.; Burnum-Johnson, Kristin E.

    2014-08-01

    Leaf-cutter ants are dominant herbivores in ecosystems throughout the Neotropics. Rather than directly consuming the fresh foliar biomass they harvest, these ants use it to cultivate specialized fungus gardens. Although recent investigations have shed light on how plant biomass is degraded in fungus gardens, the cycling of nutrients that takes place in these specialized microbial ecosystems is still not well understood. Here, using metametabolomics and metaproteomics techniques, we examine the dynamics of nutrient turnover and biosynthesis in these gardens. Our results reveal that numerous free amino acids and sugars are depleted throughout the process of biomass degradation, indicating that easily accessible nutrients from plant material are readily consumed by microbes in these ecosystems. Accumulation of cellobiose and lignin derivatives near the end of the degradation process is consistent with previous findings of cellulases and laccases produced by Leucoagaricus gongylophorus, the fungus cultivated by leaf-cutter ants. Our results also suggest that ureides may be an important source of nitrogen in fungus gardens, especially during nitrogen-limiting conditions. No free arginine was detected in our metametabolomics experiments despite evidence that the host ants cannot produce this amino acid, suggesting that biosynthesis of this metabolite may be tightly regulated in the fungus garden. These results provide new insights into the dynamics of nutrient cycling that underlie this important ant-fungus symbiosis.

  4. The Dynamics of Plant Cell-Wall Polysaccharide Decomposition in Leaf-Cutting Ant Fungus Gardens

    PubMed Central

    Harholt, Jesper; Willats, William G. T.; Boomsma, Jacobus J.

    2011-01-01

    The degradation of live plant biomass in fungus gardens of leaf-cutting ants is poorly characterised but fundamental for understanding the mutual advantages and efficiency of this obligate nutritional symbiosis. Controversies about the extent to which the garden-symbiont Leucocoprinus gongylophorus degrades cellulose have hampered our understanding of the selection forces that induced large scale herbivory and of the ensuing ecological footprint of these ants. Here we use a recently established technique, based on polysaccharide microarrays probed with antibodies and carbohydrate binding modules, to map the occurrence of cell wall polymers in consecutive sections of the fungus garden of the leaf-cutting ant Acromyrmex echinatior. We show that pectin, xyloglucan and some xylan epitopes are degraded, whereas more highly substituted xylan and cellulose epitopes remain as residuals in the waste material that the ants remove from their fungus garden. These results demonstrate that biomass entering leaf-cutting ant fungus gardens is only partially utilized and explain why disproportionally large amounts of plant material are needed to sustain colony growth. They also explain why substantial communities of microbial and invertebrate symbionts have evolved associations with the dump material from leaf-cutting ant nests, to exploit decomposition niches that the ant garden-fungus does not utilize. Our approach thus provides detailed insight into the nutritional benefits and shortcomings associated with fungus-farming in ants. PMID:21423735

  5. Fungal garden making inside bamboos by a non-social fungus-growing beetle.

    PubMed

    Toki, Wataru; Takahashi, Yukiko; Togashi, Katsumi

    2013-01-01

    In fungus-growing mutualism, it is indispensable for host animals to establish gardens of the symbiotic fungus as rapidly as possible. How to establish fungal gardens has been well-documented in social fungus-farming insects, whereas poorly documented in non-social fungus-farming insects. Here we report that the non-social, fungus-growing lizard beetle Doubledaya bucculenta (Coleoptera: Erotylidae: Languriinae) transmits the symbiotic yeast Wickerhamomyces anomalus from the ovipositor-associated mycangium into bamboo internode cavities and disperses the yeast in the cavities to make gardens. Microbial isolation and cryo-scanning electron microscopy observation revealed that W. anomalus was constantly located on the posterior ends of eggs, where larvae came out, and on the inner openings of oviposition holes. Direct observation of oviposition behavior inside internodes revealed that the distal parts of ovipositors showed a peristaltic movement when they were in contact with the posterior ends of eggs. Rearing experiments showed that W. anomalus was spread much more rapidly and widely on culture media and internodes in the presence of the larvae than in the absence. These results suggest that the ovipositors play a critical role in vertical transmission of W. anomalus and that the larvae contribute actively to the garden establishment, providing a novel case of fungal garden founding in non-social insect-fungus mutualism. PMID:24223958

  6. Starch metabolism in Leucoagaricus gongylophorus, the symbiotic fungus of leaf-cutting ants.

    PubMed

    Silva, A; Bacci, M; Pagnocca, F C; Bueno, O C; Hebling, M J A

    2006-01-01

    Leucoagaricus gongylophorus, the symbiotic fungus of the leaf-cutting ants, degrades starch, this degradation being supposed to occur in the plant material which leafcutters forage to the nests, generating most of the glucose which the ants utilize for food. In the present investigation, we show that laboratory cultures of L. gongylophorus produce extracellular alpha-amylase and maltase which degrade starch to glucose, reinforcing that the ants can obtain glucose from starch through the symbiotic fungus. Glucose was found to repress alpha-amylase and, more severely, maltase activity, thus repressing starch degradation by L. gongylophorus, so that we hypothesize that: (1) glucose down-regulation of starch degradation also occurs in the Atta sexdens fungus garden; (2) glucose consumption from the fungus garden by A. sexdens stimulates degradation of starch from plant material by L. gongylophorus, which may represent a mechanism by which leafcutters can control enzyme production by the symbiotic fungus. Since glucose is found in the fungus garden inside the nests, down-regulation of starch degradation by glucose is supposed to occur in the nest and play a part in the control of fungal enzyme production by leafcutters.

  7. Microalgae harvesting via co-culture with filamentous fungus

    NASA Astrophysics Data System (ADS)

    Gultom, Sarman Oktovianus

    Microalgae harvesting is a labor- and energy-intensive process. For instance, classical harvesting technologies such as chemical addition and mechanical separation are economically prohibiting for biofuel production. Newer approaches to harvest microalgae have been developed in order to decrease costs. Among these new methods, fungal co-pelletization seems to be a promising technology. By co-culturing filamentous fungi with microalgae, it is possible to form pellets, which can easily be separated. In this study, different parameters for the cultivation of filamentous fungus (Aspergillus niger) and microalgae (Chlorella vulgaris) to efficiently form cell pellets were evaluated under heterotrophic and phototrophic conditions, including organic carbon source (glucose, glycerol and sodium acetate) concentration, pH, initial concentration of fungal spores, initial concentration of microalgal cells, concentration of ionic strength (Calcium and Magnesium) and concentration of salinity (NaCl). In addition, zeta-potential measurements were carried out in order to get a better understanding of the mechanism of attraction. It was found that 2 g/L of glucose, a fungus to microalgae ratio of 1:300, and uncontrolled pH (around 7) are the best culturing conditions for co-pelletization. Under these conditions, it was possible to achieve a high harvesting performance (>90%). In addition, it was observed that most pellets formed in the co-culture were spherical with an average diameter of 3.5 mm and in concentrations of about 5 pellets per mL of culture media. Under phototrophic conditions, co-pelletization required the addition of glucose as organic carbon source to sustain the growth of fungi and to allow the harvesting of microalgae. Zeta-potential measurements indicated that (i) both microalgae and fungi have low zeta-potential values regardless of the pH on the bulk (i.e. <-10 mV) (ii) fungi can have a positive electric charge at low pH (ie. pH=3). These values suggest that it

  8. HALF-LIVES OF LONG-LIVED A-DECAY, B-DECAY, BB-DECAY AND SPONTANEOUS FISSION NUCLIDES.

    SciTech Connect

    HOLDEN,N.E.

    2001-06-29

    In his review of radionuclides for dating purposes, Roth noted that there were a large number of nuclides, normally considered ''stable'' but which are radioactive with a very long half-life. Roth suggested that I review the data on the half-life values of these long-lived nuclides for a discussion session at the next meeting. These half-life values for long-lived nuclides include those due to various decay modes, {alpha}-decay, {beta}-decay, electron capture decay, {beta}{beta}-decay and spontaneous fission decay. This report is preliminary but will provide a quick overview of the extensive table of data on the recommendations from that review.

  9. Exploring the simplest purely baryonic decay processes

    NASA Astrophysics Data System (ADS)

    Geng, C. Q.; Hsiao, Y. K.; Rodrigues, Eduardo

    2016-07-01

    Though not considered in general, purely baryonic decays could shed light on the puzzle of the baryon number asymmetry in the universe by means of a better understanding of the baryonic nature of our matter world. As such, they constitute a yet unexplored class of decay processes worth investigating. We propose to search for purely baryonic decay processes at the LHCb experiment. No such type of decay has ever been observed. In particular, we concentrate on the decay Λb0→p p ¯n , which is the simplest purely baryonic decay mode, with solely spin-1 /2 baryons involved. We predict its decay branching ratio to be B (Λb0→p p ¯ n )=(2. 0-0.2+0.3)×10-6 , which is sufficiently large to make the decay mode accessible to LHCb. Our study can be extended to other purely baryonic decays such as Λb0→p p ¯ Λ , Λb0→Λ p ¯ Λ , and Λb0→Λ Λ ¯Λ , as well as to similar decays of antitriplet b baryons such as Ξb0 ,-.

  10. Bremsstrahlung in {alpha} Decay Reexamined

    SciTech Connect

    Boie, H.; Scheit, H.; Jentschura, U. D.; Koeck, F.; Lauer, M.; Schwalm, D.; Milstein, A. I.; Terekhov, I. S.

    2007-07-13

    A high-statistics measurement of bremsstrahlung emitted in the {alpha} decay of {sup 210}Po has been performed, which allows us to follow the photon spectra up to energies of {approx}500 keV. The measured differential emission probability is in good agreement with our theoretical results obtained within the quasiclassical approximation as well as with the exact quantum mechanical calculation. It is shown that, due to the small effective electric dipole charge of the radiating system, a significant interference between the electric dipole and quadrupole contributions occurs, which is altering substantially the angular correlation between the {alpha} particle and the emitted photon.

  11. Bremsstrahlung in alpha decay reexamined.

    PubMed

    Boie, H; Scheit, H; Jentschura, U D; Köck, F; Lauer, M; Milstein, A I; Terekhov, I S; Schwalm, D

    2007-07-13

    A high-statistics measurement of bremsstrahlung emitted in the alpha decay of (210)Po has been performed, which allows us to follow the photon spectra up to energies of approximately 500 keV. The measured differential emission probability is in good agreement with our theoretical results obtained within the quasiclassical approximation as well as with the exact quantum mechanical calculation. It is shown that, due to the small effective electric dipole charge of the radiating system, a significant interference between the electric dipole and quadrupole contributions occurs, which is altering substantially the angular correlation between the alpha particle and the emitted photon.

  12. Gravitational effects on inflaton decay

    SciTech Connect

    Ema, Yohei; Jinno, Ryusuke; Mukaida, Kyohei; Nakayama, Kazunori

    2015-05-22

    We point out that the inflaton inevitably couples to all non-conformally coupled matters gravitationally through an oscillation in the Hubble parameter or the cosmic scale factor. It leads to particle production during the inflaton oscillation regime, which is most efficient just after inflation. Moreover, the analysis is extended to the model with non-minimal inflaton couplings to gravity, in which the Hubble parameter oscillates more violently. We apply our results to the graviton production by the inflaton: gravitons are also produced just after inflation, but the non-minimal coupling does not induce inflaton decay into the graviton pair.

  13. Vacuum Decay via Lorentzian Wormholes

    NASA Astrophysics Data System (ADS)

    Rosales, J. L.

    We speculate about the space-time description due to the presence of Lorentzian worm-holes (handles in space-time joining two distant regions or other universes) in quantum gravity. The semiclassical rate of production of these Lorentzian wormholes in Reissner-Nordström space-times is calculated as a result of the spontaneous decay of vacuum due to a real tunneling configuration. In the magnetic case it only depends on the value of the field theoretical fine structure constant. We predict that the quantum probability corresponding to the nucleation of such geodesically complete space-times should be acutally negligible in our physical Universe.

  14. Proton decay studies at HRIBF

    SciTech Connect

    Batchelder, J.C.; Bingham, C.R.; Rykaczewski, K.; Toth, K.S.; Mas, J.F.; McConnell, J.W.; Yu, C.; Bingham, C.R.; Grzywacz, R.; Kim, S.H.; Weintraub, W.; Rykaczewski, K.; Janas, Z.; Karny, M.; Davinson, T.; Slinger, R.C.; Woods, P.J.; Ginter, T.N.; Gross, C.J.; MacDonald, B.D.; Piechaczek, A.; Zganjar, E.F.; Ressler, J.J.; Walters, W.B.; Szerypo, J.

    1998-12-01

    A double-sided Si-strip detector system has been installed and commissioned at the focal plane of the Recoil Mass Spectrometer at the Holifield Radioactive Ion Beam Facility. The system can be used for heavy charged particle emission studies with half-lives as low as a few {mu}sec. In this paper we present identification and study of the decay properties of the five new proton emitters: {sup 140}Ho, {sup 141m}Ho, {sup 145}Tm, {sup 150m}Lu and {sup 151m}Lu. {copyright} {ital 1998 American Institute of Physics.}

  15. Classical picture of postexponential decay

    SciTech Connect

    Torrontegui, E.; Muga, J. G.; Martorell, J.; Sprung, D. W. L.

    2010-04-15

    Postexponential decay of the probability density of a quantum particle leaving a trap can be reproduced accurately, except for interference oscillations at the transition to the postexponential regime, by means of an ensemble of classical particles emitted with constant probability per unit time and the same half-life as the quantum system. The energy distribution of the ensemble is chosen to be identical to the quantum distribution, and the classical point source is located at the scattering length of the corresponding quantum system. A one-dimensional example is provided to illustrate the general argument.

  16. Genes involved in virulence of the entomopathogenic fungus Beauveria bassiana.

    PubMed

    Valero-Jiménez, Claudio A; Wiegers, Harm; Zwaan, Bas J; Koenraadt, Constantianus J M; van Kan, Jan A L

    2016-01-01

    Pest insects cause severe damage to global crop production and pose a threat to human health by transmitting diseases. Traditionally, chemical pesticides (insecticides) have been used to control such pests and have proven to be effective only for a limited amount of time because of the rapid spread of genetic insecticide resistance. The basis of this resistance is mostly caused by (co)dominant mutations in single genes, which explains why insecticide use alone is an unsustainable solution. Therefore, robust solutions for insect pest control need to be sought in alternative methods such as biological control agents for which single-gene resistance is less likely to evolve. The entomopathogenic fungus Beauveria bassiana has shown potential as a biological control agent of insects, and insight into the mechanisms of virulence is essential to show the robustness of its use. With the recent availability of the whole genome sequence of B. bassiana, progress in understanding the genetics that constitute virulence toward insects can be made more quickly. In this review we divide the infection process into distinct steps and provide an overview of what is currently known about genes and mechanisms influencing virulence in B. bassiana. We also discuss the need for novel strategies and experimental methods to better understand the infection mechanisms deployed by entomopathogenic fungi. Such knowledge can help improve biocontrol agents, not only by selecting the most virulent genotypes, but also by selecting the genotypes that use combinations of virulence mechanisms for which resistance in the insect host is least likely to develop.

  17. ENTOMOPATHOGENIC FUNGUS ENTOMOPHAGA MAIMAIGA AND INTEGRATED PEST MANAGEMENT IN SERBIA.

    PubMed

    Tabaković-Tosić, Mara

    2015-01-01

    During the latest outbreak of the gypsy moth in Serbia (2009-2014), some areas of Central Serbia were particularly endangered, and one of them was Krusevac region, where the forests give way to orchards in the pattern resembling the tiger's skin. Since the number of the laid egg masses in the autumn 2013 guaranteed the defoliation of both forest tree species and agricultural crops, and the presence of E. maimaigo, in Central Serbia had already been determined, at 30 selected plots the assisted spread of it was performed, through the introduction of the infectious inoculum in the beech and oak forests which border the orchards. Since there was dealt with the living organism--fungus, which is particularly susceptible to the weather conditions (temperature and air humidity, as well as the precipitation), and under the conditions of the global warming and great drought, the special recipe for the preparation of inoculum was made. In the following year the mass epizootic of the gypsy moth caterpillars, of the younger instars (L2 and L3), occurred, which implies that E. maimaiga caused the crash of the outbreak of this most harmful species of the defoliating insects of the forests and orchards.

  18. Bioactive metabolites from the endophytic fungus Alternaria alternata.

    PubMed

    Wang, Ying; Yang, Ming-Hua; Wang, Xiao-Bing; Li, Tian-Xiao; Kong, Ling-Yi

    2014-12-01

    Two altenuene derivatives (1-2) and one isocoumarin (3), together with six known compounds (4-9) were isolated from solid cultures of an endophytic fungus Alternaria alternata, obtained from the fresh branches of Camellia sinensis. Chiral analysis revealed the racemic nature of 1 and 2, which were subsequently resolved into two pairs of enantiomers [(+)-1 and (-)-1, (+)-2 and (-)-2]. Structures of all the isolates were identified through spectroscopic data. Absolute configurations of the two pairs of enantiomers were determined by electronic circular dichroism (ECD) calculation and the chiral center of C-10 in 3 was deduced via [Rh2(OCOCF₃)₄]-induced CD experiment. All the isolates were evaluated for their antimicrobial abilities against the pathogenic bacteria and fungi as well as cytotoxic activities against two human tumor cell lines. Compound 5 was the most active against Bacillus subtilis with MIC₈₀ of 8.6 μg/ml, and compounds 1-3, 6-7 and 9 exhibited moderate to weak inhibition towards the test pathogenic microorganism. Compound 4 showed mild cytotoxic activity against human osteosarcoma cells U2OS with IC₅₀ of 28.3 μM.

  19. Structural analysis of fungus-derived FAD glucose dehydrogenase

    PubMed Central

    Yoshida, Hiromi; Sakai, Genki; Mori, Kazushige; Kojima, Katsuhiro; Kamitori, Shigehiro; Sode, Koji

    2015-01-01

    We report the first three-dimensional structure of fungus-derived glucose dehydrogenase using flavin adenine dinucleotide (FAD) as the cofactor. This is currently the most advanced and popular enzyme used in glucose sensor strips manufactured for glycemic control by diabetic patients. We prepared recombinant nonglycosylated FAD-dependent glucose dehydrogenase (FADGDH) derived from Aspergillus flavus (AfGDH) and obtained the X-ray structures of the binary complex of enzyme and reduced FAD at a resolution of 1.78 Å and the ternary complex with reduced FAD and D-glucono-1,5-lactone (LGC) at a resolution of 1.57 Å. The overall structure is similar to that of fungal glucose oxidases (GOxs) reported till date. The ternary complex with reduced FAD and LGC revealed the residues recognizing the substrate. His505 and His548 were subjected for site-directed mutagenesis studies, and these two residues were revealed to form the catalytic pair, as those conserved in GOxs. The absence of residues that recognize the sixth hydroxyl group of the glucose of AfGDH, and the presence of significant cavity around the active site may account for this enzyme activity toward xylose. The structural information will contribute to the further engineering of FADGDH for use in more reliable and economical biosensing technology for diabetes management. PMID:26311535

  20. [Furfural degradation by filamentous fungus Amorphotheca resinae ZN1].

    PubMed

    Wang, Xiaofeng; Zhang, Jian; Xin, Xiujuan; Bao, Jie

    2012-09-01

    Some degradation products from lignocellulose pretreatment strongly inhibit the activities of cellulolytic enzymes and ethanol fermentation strains, thus the efficient removal of the inhibitor substances ("detoxification") is the inevitable step for the biotransformation processes. In this study, the biological detoxification of furfural by a newly isolated fungus, Amorphotheca resinae ZN1, was studied and the metabolic pathways of furfural degradation was analyzed. The metabolic pathway of furfural degradation in A. resinae ZN1 was described as follows: first, furfural was quickly converted into the low toxic furfuryl alcohol; then the furfuryl alcohol was gradually converted into furfural again but under the low concentration under aerobic condition, which was not lethal to the growth of the fungi; furfural continued to be oxidized to furoic acid by A. resinae ZN1. It is likely that furoic acid was further degraded in the TCA cycle to complete the biological degradation of furfural. The present study provided the important experimental basis for speeding up the biodetoxification of furfural by A. resinae ZN1 and the rate-limiting step in the lignocellulose biotransformation to ethanol.

  1. Acrophialophora, a Poorly Known Fungus with Clinical Significance

    PubMed Central

    Sandoval-Denis, Marcelo; Sutton, Deanna A.; Wiederhold, Nathan P.; Guarro, Josep

    2015-01-01

    Acrophialophora fusispora is an emerging opportunistic fungus capable of causing human infections. The taxonomy of the genus is not yet resolved and, in order to facilitate identification of clinical specimens, we have studied a set of clinical and environmental Acrophialophora isolates by morphological and molecular analyses. This set included the available type strains of Acrophialophora species and similar fungi, some of which were considered by various authors to be synonyms of A. fusispora. Sequence analysis of the large subunit (LSU) and internal transcribed spacer (ITS) regions of the nuclear ribosomal DNA and a fragment of the β-tubulin (Tub) gene revealed that Acrophialophora belongs in the family Chaetomiaceae and comprises three different species, i.e., A. fusispora, Acrophialophora levis, and Acrophialophora seudatica; the latter was previously included in the genus Ampullifera. The most prevalent species among clinical isolates was A. levis (72.7%), followed by A. fusispora (27.3%), both of which were isolated mostly from respiratory specimens (72.7%), as well as subcutaneous and corneal tissue samples. In general, of the eight antifungal drugs tested, voriconazole had the greatest in vitro activity, while all other agents showed poor in vitro activity against these fungi. PMID:25716450

  2. Fungus mediated biosynthesis and characterization of zinc oxide nanorods

    NASA Astrophysics Data System (ADS)

    Venkatesh, K. S.; Palani, N. S.; Krishnamoorthi, S. R.; Thirumal, V.; Ilangovan, R.

    2013-06-01

    Recently nanomaterials have been synthesized through biological approach due to its biocompatibility, inexpensive, eco friendly and it offers easiest experimental protocol and so on. ZnO can be potentially used in various applications. This present study reports the fungus mediated extra-cellular bio synthesis of ZnO nanorods using Fusarium Solani. The dried powder was calcined at 350°C for 1 hour in air. The thermal property of the as synthesized ZnO nanopowder was analyzed through Thermo gravimetric /Differential Thermo gravimetric (TGA / DTG) analysis. The structural and morphological properties of the calcined ZnO nanopowder were studied by XRD and SEM analysis respectively. X ray diffraction result revealed that a peak located at 2θ = 36.2° with (101) plane confirms the presence of Zinc oxide with Hexagonal crystal system. The morphology of the calcined ZnO powder was analyzed by Scanning Electron Microscopy and it clearly indicates the presence of ZnO nanorods. The diameter of the nanorods is in the range of 60 to 95 nm.

  3. Clinical Evaluation and Management of Patients with Suspected Fungus Sensitivity.

    PubMed

    Larenas-Linnemann, Desiree; Baxi, Sachin; Phipatanakul, Wanda; Portnoy, Jay M

    2016-01-01

    Fungus-sensitized patients usually present with symptoms that are similar to symptoms presented by those who are sensitized to other aeroallergens. Therefore, diagnosis and management should follow the same pathways used for patients with allergic conditions in general. The physician should consider that a relationship between fungal exposure and symptoms is not necessarily caused by an IgE-mediated mechanism, even when specific fungal IgE is detected. Until recently, IgE-mediated allergy has been documented only for a limited number of fungi. We propose a series of questions to be used to identify symptoms that occur in situations with high fungal exposure and a limited skin-prick-test panel (Alternaria, Cladosporium, Penicillium, Aspergillus, Candida) that can be amplified only in cases of high suspicion of other fungal exposure (eg, postfloods). We also review in vitro testing for fungi-specific IgE. Treatment includes environmental control, medical management, and, when appropriate, specific immunotherapy. Low-quality evidence exists supporting the use of subcutaneous immunotherapy for Alternaria to treat allergic rhinitis and asthma, and very low quality evidence supports the use of subcutaneous immunotherapy for Cladosporium and sublingual immunotherapy for Alternaria. As is the case for many allergens, evidence for immunotherapy with other fungal extracts is lacking. The so-called toxic mold syndrome is also briefly discussed.

  4. Antibacterial Azaphilones from an Endophytic Fungus, Colletotrichum sp. BS4.

    PubMed

    Wang, Wen-Xuan; Kusari, Souvik; Laatsch, Hartmut; Golz, Christopher; Kusari, Parijat; Strohmann, Carsten; Kayser, Oliver; Spiteller, Michael

    2016-04-22

    Three new compounds, colletotrichones A-C (1-3), and one known compound, chermesinone B (4a), were isolated from an endophytic fungus, Colletotrichum sp. BS4, harbored in the leaves of Buxus sinica, a well-known boxwood plant used in traditional Chinese medicine (TCM). Their structures were determined by extensive spectroscopic analyses including 1D and 2D NMR, HRMS, ECD spectra, UV, and IR, as well as single-crystal X-ray diffraction, and shown to be azaphilones sharing a 3,6a-dimethyl-9-(2-methylbutanoyl)-9H-furo[2,3-h]isochromene-6,8-dione scaffold. Owing to the remarkable antibacterial potency of known azaphilones coupled to the usage of the host plant in TCM, we evaluated the antibacterial efficacy of the isolated compounds against two commonly dispersed environmental strains of Escherichia coli and Bacillus subtilis, as well as against two human pathogenic clinical strains of Staphylococcus aureus and Pseudomonas aeruginosa. Compound 1 exhibited marked antibacterial potencies against the environmental strains that were comparable to the standard antibiotics. Compound 3 was also active against E. coli. Finally, compound 2a exhibited the same efficacy as streptomycin against the clinically relevant bacterium S. aureus. The in vitro cytotoxicity of these compounds on a human acute monocytic leukemia cell line (THP-1) was also assessed. Our results provide a scientific rationale for further investigations into endophyte-mediated host chemical defense against specialist and generalist pathogens.

  5. Bioturbation by the Fungus-Gardening Ant, Trachymyrmex septentrionalis

    PubMed Central

    Tschinkel, Walter R.; Seal, Jon N.

    2016-01-01

    Soil invertebrates such as ants are thought to be important manipulators of soils in temperate and tropical ecosystems. The fungus gardening ant, Trachymyrmex septentrionalis, is an important agent of biomantling, that is, of depositing soil excavated from below onto the surface, and has been suggested as an agent of bioturbation (moving soil below ground) as well. The amount of bioturbation by this ant was quantified by planting queenright colonies in sand columns consisting of 5 layers of different colored sand. The amount of each color of sand deposited on the surface was determined from April to November 2015. In November, colonies were excavated and the color and amount of sand deposited below ground (mostly as backfill in chambers) was determined. Extrapolated to one ha, T. septentrionalis deposited 800 kg of sand per annum on the surface, and an additional 200 kg (17% of the total excavated) below ground. On average, this mixes 1.3% of the sand from other layers within the top meter of soil per millennium, but this mixing is unlikely to be homogeneous, and probably occurs as "hotspots" in both horizontal and vertical space. Such mixing is discussed as a challenge to sediment dating by optically stimulated luminescence (OSL). PMID:27391485

  6. Additional disinfectants effective against the amphibian chytrid fungus Batrachochytrium dendrobatidis.

    PubMed

    Webb, R; Mendez, D; Berger, L; Speare, R

    2007-02-01

    Chytridiomycosis, a disease contributing to amphibian declines worldwide, is caused by the fungus Batrachochytrium dendrobatidis. Identifying efficient and practical disinfectants effective against B. dendrobatidis is important to reduce the spread of the disease both in the wild and captivity. Previous studies identified a range of suitable disinfectant strategies. We evaluated the suitability of 3 additional disinfectants: two of these (TriGene Virucidal Disinfectant Cleaner and F10 Super Concentrate Disinfectant) are mixtures of chemicals and one (Betadine Antiseptic Liquid) contains a single active ingredient, povidone iodine. The disinfectants were tested using a range of concentrations for 1,5 and 10 min to determine their ability to kill B. dendrobatidis in vitro. The measure of effectiveness was 100% kill of zoosporangia grown in multiwell plates. All disinfectants had a 100% efficacy at concentrations recommended by the manufacturers. The lowest concentrations capable of 100% kill after exposure for 1 min were 0.1 ml l(-1) for TriGene, 0.33 ml l(-1) for F10 and 100 ml l(-1) for Betadine. TriGene is the most effective disinfectant yet to be found, and both TriGene and F10 are more effective than various disinfectants tested in previous studies. TriGene and F10 are considered suitable for use in the field, as only small amounts of concentrate are needed. PMID:17425259

  7. Bioturbation by the Fungus-Gardening Ant, Trachymyrmex septentrionalis.

    PubMed

    Tschinkel, Walter R; Seal, Jon N

    2016-01-01

    Soil invertebrates such as ants are thought to be important manipulators of soils in temperate and tropical ecosystems. The fungus gardening ant, Trachymyrmex septentrionalis, is an important agent of biomantling, that is, of depositing soil excavated from below onto the surface, and has been suggested as an agent of bioturbation (moving soil below ground) as well. The amount of bioturbation by this ant was quantified by planting queenright colonies in sand columns consisting of 5 layers of different colored sand. The amount of each color of sand deposited on the surface was determined from April to November 2015. In November, colonies were excavated and the color and amount of sand deposited below ground (mostly as backfill in chambers) was determined. Extrapolated to one ha, T. septentrionalis deposited 800 kg of sand per annum on the surface, and an additional 200 kg (17% of the total excavated) below ground. On average, this mixes 1.3% of the sand from other layers within the top meter of soil per millennium, but this mixing is unlikely to be homogeneous, and probably occurs as "hotspots" in both horizontal and vertical space. Such mixing is discussed as a challenge to sediment dating by optically stimulated luminescence (OSL).

  8. Direct electrochemistry of nitrate reductase from the fungus Neurospora crassa.

    PubMed

    Kalimuthu, Palraj; Ringel, Phillip; Kruse, Tobias; Bernhardt, Paul V

    2016-09-01

    We report the first direct (unmediated) catalytic electrochemistry of a eukaryotic nitrate reductase (NR). NR from the filamentous fungus Neurospora crassa, is a member of the mononuclear molybdenum enzyme family and contains a Mo, heme and FAD cofactor which are involved in electron transfer from NAD(P)H to the (Mo) active site where reduction of nitrate to nitrite takes place. NR was adsorbed on an edge plane pyrolytic graphite (EPG) working electrode. Non-turnover redox responses were observed in the absence of nitrate from holo NR and three variants lacking the FAD, heme or Mo cofactor. The FAD response is due to dissociated cofactor in all cases. In the presence of nitrate, NR shows a pronounced cathodic catalytic wave with an apparent Michaelis constant (KM) of 39μM (pH7). The catalytic cathodic current increases with temperature from 5 to 35°C and an activation enthalpy of 26kJmol(-1) was determined. In spite of dissociation of the FAD cofactor, catalytically activity is maintained. PMID:27060250

  9. Garden sharing and garden stealing in fungus-growing ants.

    PubMed

    Adams, R M; Mueller, U G; Holloway, A K; Green, A M; Narozniak, J

    2000-11-01

    Fungi cultivated by fungus-growing ants (Attini: Formicidae) are passed on between generations by transfer from maternal to offspring nest (vertical transmission within ant species). However, recent phylogenetic analyses revealed that cultivars are occasionally also transferred between attine species. The reasons for such lateral cultivar transfers are unknown. To investigate whether garden loss may induce ants to obtain a replacement cultivar from a neighboring colony (lateral cultivar transfer), pairs of queenright colonies of two Cyphomyrmex species were set up in two conjoined chambers; the garden of one colony was then removed to simulate the total crop loss that occurs naturally when pathogens devastate gardens. Garden-deprived colonies regained cultivars through one of three mechanisms: joining of a neighboring colony and cooperation in a common garden; stealing of a neighbor's garden; or aggressive usurpation of a neighbor's garden. Because pathogens frequently devastate attine gardens under natural conditions, garden joining, stealing and usurpation emerge as critical behavioral adaptations to survive garden catastrophes. PMID:11151668

  10. Biosynthesis of sesquiterpenes by the fungus Fusarium verticillioides.

    PubMed

    Dickschat, Jeroen S; Brock, Nelson L; Citron, Christian A; Tudzynski, Bettina

    2011-09-01

    The volatiles of the fungus Fusarium verticillioides were analysed by GC-MS. Sesquiterpenes dominated, with trichodiene as the principle component. Several other sesquiterpenes were detected in low amounts that were unambiguously identified from their mass spectra and retention indices. The absolute configurations of (R)-β-bisabolene, (R)-cuparene, (+)-β-barbatene, (-)-α-cedrene, (+)-β-cedrene, and (+)-α-funebrene originating from different key cationic intermediates, were determined by chiral GC-MS and proved to be related to the trichodiene stereostructure. The unusual compound (E)-iso-γ-bisabolene was also found corroborating a previously suggested mechanism for the cyclisation of the bisabolyl to the cuprenyl cation that is based on quantum mechanical calculations (Y. J. Hong, D. J. Tantillo, Org. Lett. 2006, 8, 4601-4604). These analyses resulted in a revised biosynthesis scheme to trichodiene and the side products of the responsible terpene cyclase, trichodiene synthase, an enzyme that is well characterised from Fusarium sporotrichioides. Feeding studies with several deuterated mevalonolactone isotopomers unravelled stereochemical aspects of the late cyclisations towards trichodiene. PMID:21748838

  11. Clinical Evaluation and Management of Patients with Suspected Fungus Sensitivity.

    PubMed

    Larenas-Linnemann, Desiree; Baxi, Sachin; Phipatanakul, Wanda; Portnoy, Jay M

    2016-01-01

    Fungus-sensitized patients usually present with symptoms that are similar to symptoms presented by those who are sensitized to other aeroallergens. Therefore, diagnosis and management should follow the same pathways used for patients with allergic conditions in general. The physician should consider that a relationship between fungal exposure and symptoms is not necessarily caused by an IgE-mediated mechanism, even when specific fungal IgE is detected. Until recently, IgE-mediated allergy has been documented only for a limited number of fungi. We propose a series of questions to be used to identify symptoms that occur in situations with high fungal exposure and a limited skin-prick-test panel (Alternaria, Cladosporium, Penicillium, Aspergillus, Candida) that can be amplified only in cases of high suspicion of other fungal exposure (eg, postfloods). We also review in vitro testing for fungi-specific IgE. Treatment includes environmental control, medical management, and, when appropriate, specific immunotherapy. Low-quality evidence exists supporting the use of subcutaneous immunotherapy for Alternaria to treat allergic rhinitis and asthma, and very low quality evidence supports the use of subcutaneous immunotherapy for Cladosporium and sublingual immunotherapy for Alternaria. As is the case for many allergens, evidence for immunotherapy with other fungal extracts is lacking. The so-called toxic mold syndrome is also briefly discussed. PMID:26755100

  12. Bioturbation by the Fungus-Gardening Ant, Trachymyrmex septentrionalis.

    PubMed

    Tschinkel, Walter R; Seal, Jon N

    2016-01-01

    Soil invertebrates such as ants are thought to be important manipulators of soils in temperate and tropical ecosystems. The fungus gardening ant, Trachymyrmex septentrionalis, is an important agent of biomantling, that is, of depositing soil excavated from below onto the surface, and has been suggested as an agent of bioturbation (moving soil below ground) as well. The amount of bioturbation by this ant was quantified by planting queenright colonies in sand columns consisting of 5 layers of different colored sand. The amount of each color of sand deposited on the surface was determined from April to November 2015. In November, colonies were excavated and the color and amount of sand deposited below ground (mostly as backfill in chambers) was determined. Extrapolated to one ha, T. septentrionalis deposited 800 kg of sand per annum on the surface, and an additional 200 kg (17% of the total excavated) below ground. On average, this mixes 1.3% of the sand from other layers within the top meter of soil per millennium, but this mixing is unlikely to be homogeneous, and probably occurs as "hotspots" in both horizontal and vertical space. Such mixing is discussed as a challenge to sediment dating by optically stimulated luminescence (OSL). PMID:27391485

  13. ENTOMOPATHOGENIC FUNGUS ENTOMOPHAGA MAIMAIGA AND INTEGRATED PEST MANAGEMENT IN SERBIA.

    PubMed

    Tabaković-Tosić, Mara

    2015-01-01

    During the latest outbreak of the gypsy moth in Serbia (2009-2014), some areas of Central Serbia were particularly endangered, and one of them was Krusevac region, where the forests give way to orchards in the pattern resembling the tiger's skin. Since the number of the laid egg masses in the autumn 2013 guaranteed the defoliation of both forest tree species and agricultural crops, and the presence of E. maimaigo, in Central Serbia had already been determined, at 30 selected plots the assisted spread of it was performed, through the introduction of the infectious inoculum in the beech and oak forests which border the orchards. Since there was dealt with the living organism--fungus, which is particularly susceptible to the weather conditions (temperature and air humidity, as well as the precipitation), and under the conditions of the global warming and great drought, the special recipe for the preparation of inoculum was made. In the following year the mass epizootic of the gypsy moth caterpillars, of the younger instars (L2 and L3), occurred, which implies that E. maimaiga caused the crash of the outbreak of this most harmful species of the defoliating insects of the forests and orchards. PMID:27145580

  14. The genome sequence of the model ascomycete fungus Podospora anserina

    PubMed Central

    Espagne, Eric; Lespinet, Olivier; Malagnac, Fabienne; Da Silva, Corinne; Jaillon, Olivier; Porcel, Betina M; Couloux, Arnaud; Aury, Jean-Marc; Ségurens, Béatrice; Poulain, Julie; Anthouard, Véronique; Grossetete, Sandrine; Khalili, Hamid; Coppin, Evelyne; Déquard-Chablat, Michelle; Picard, Marguerite; Contamine, Véronique; Arnaise, Sylvie; Bourdais, Anne; Berteaux-Lecellier, Véronique; Gautheret, Daniel; de Vries, Ronald P; Battaglia, Evy; Coutinho, Pedro M; Danchin, Etienne GJ; Henrissat, Bernard; Khoury, Riyad EL; Sainsard-Chanet, Annie; Boivin, Antoine; Pinan-Lucarré, Bérangère; Sellem, Carole H; Debuchy, Robert; Wincker, Patrick; Weissenbach, Jean; Silar, Philippe

    2008-01-01

    Background The dung-inhabiting ascomycete fungus Podospora anserina is a model used to study various aspects of eukaryotic and fungal biology, such as ageing, prions and sexual development. Results We present a 10X draft sequence of P. anserina genome, linked to the sequences of a large expressed sequence tag collection. Similar to higher eukaryotes, the P. anserina transcription/splicing machinery generates numerous non-conventional transcripts. Comparison of the P. anserina genome and orthologous gene set with the one of its close relatives, Neurospora crassa, shows that synteny is poorly conserved, the main result of evolution being gene shuffling in the same chromosome. The P. anserina genome contains fewer repeated sequences and has evolved new genes by duplication since its separation from N. crassa, despite the presence of the repeat induced point mutation mechanism that mutates duplicated sequences. We also provide evidence that frequent gene loss took place in the lineages leading to P. anserina and N. crassa. P. anserina contains a large and highly specialized set of genes involved in utilization of natural carbon sources commonly found in its natural biotope. It includes genes potentially involved in lignin degradation and efficient cellulose breakdown. Conclusion The features of the P. anserina genome indicate a highly dynamic evolution since the divergence of P. anserina and N. crassa, leading to the ability of the former to use specific complex carbon sources that match its needs in its natural biotope. PMID:18460219

  15. Bioactive Chaetoglobosins from the Mangrove Endophytic Fungus Penicillium chrysogenum

    PubMed Central

    Huang, Song; Chen, Haiyan; Li, Wensheng; Zhu, Xinwei; Ding, Weijia; Li, Chunyuan

    2016-01-01

    A novel chaetoglobosin named penochalasin I (1) with a unprecedented six-cyclic 6/5/6/5/6/13 fused ring system, and another new chaetoglobosin named penochalasin J (2), along with chaetoglobosins G, F, C, A, E, armochaetoglobosin I, and cytoglobosin C (3–9) were isolated from the culture of Penicillium chrysogenum V11. Their structures were elucidated by 1D, 2D NMR spectroscopic analysis and high resolution mass spectroscopic data. The absolute configuration of compounds 1 and 2 were determined by comparing the theoretical electronic circular dichroism (ECD) calculation with the experimental CD. Compound 1 was the first example, with a six-cyclic fused ring system formed by the connection of C-5 and C-2′ of the chaetoglobosin class. Compounds 5–8 remarkably inhibited the plant pathogenic fungus R. solani (minimum inhibitory concentrations (MICs) = 11.79–23.66 μM), and compounds 2, 6, and 7 greatly inhibited C. gloeosporioides (MICs = 23.58–47.35 μM), showing an antifungal activity higher than that of carbendazim. Compound 1 exhibited marked cytotoxicity against MDA-MB-435 and SGC-7901 cells (IC50 < 10 μM), and compounds 6 and 9 showed potent cytotoxicity against SGC-7901 and A549 cells (IC50 < 10 μM). PMID:27690061

  16. Manganese peroxidases of the white rot fungus Phanerochaete sordida.

    PubMed Central

    Rüttimann-Johnson, C; Cullen, D; Lamar, R T

    1994-01-01

    The ligninolytic enzymes produced by the white rot fungus Phanerochaete sordida in liquid culture were studied. Only manganese peroxidase (MnP) activity could be detected in the supernatant liquid of the cultures. Lignin peroxidase (LiP) and laccase activities were not detected under a variety of different culture conditions. The highest MnP activity levels were obtained in nitrogen-limited cultures grown under an oxygen atmosphere. The enzyme was induced by Mn(II). The initial pH of the culture medium did not significantly affect the MnP production. Three MnP isozymes were identified (MnPI, MnPII, and MnPIII) and purified to homogeneity by anion-exchange chromatography followed by hydrophobic chromatography. The isozymes are glycoproteins with approximately the same molecular mass (around 45 kDa) but have different pIs. The pIs are 5.3, 4.2, and 3.3 for MnPI, MnPII, and MnPIII, respectively. The three isozymes are active in the same range of pHs (pHs 3.0 to 6.0) and have optimal pHs between 4.5 and 5.0. Their amino-terminal sequences, although highly similar, were distinct, suggesting that each is the product of a separate gene. Images PMID:8135519

  17. Five New Cytotoxic Metabolites from the Marine Fungus Neosartorya pseudofischeri.

    PubMed

    Lan, Wen-Jian; Fu, Sheng-Jiao; Xu, Meng-Yang; Liang, Wan-Ling; Lam, Chi-Keung; Zhong, Guo-Hua; Xu, Jun; Yang, De-Po; Li, Hou-Jin

    2016-01-01

    The marine fungus Neosartorya pseudofischeri was isolated from Acanthaster planci from the South China Sea. In a preliminary bioactivity screening, the crude methanol extract of the fungal mycelia showed significant inhibitory activity against the Sf9 cell line from the fall armyworm Spodoptera frugiperda. Five novel compounds, including 5-olefin phenylpyropene A (1), 13-dehydroxylpyripyropene A (4), deacetylsesquiterpene (7), 5-formyl-6-hydroxy-8-isopropyl-2- naphthoic acid (9) and 6,8-dihydroxy-3-((1E,3E)-penta-1,3-dien-1-yl)isochroman-1-one (10), together with eleven known compounds, phenylpyropene A (2) and C (3), pyripyropene A (5), 7-deacetylpyripyropene A (6), (1S,2R,4aR,5R,8R,8aR)-1,8a-dihydroxy-2-acetoxy-3,8-dimethyl-5- (prop-1-en-2-yl)-1,2,4a, 5,6,7,8,8a-octahydronaphthalene (8), isochaetominine C (11), trichodermamide A (12), indolyl-3-acetic acid methyl ester (13), 1-acetyl-β-carboline (14), 1,2,3,4-tetrahydro-6-hydroxyl-2-methyl-l,3,4-trioxopyrazino[l,2-a]-indole (15) and fumiquinazoline F (16), were obtained. The structures of these compounds were determined mainly by MS and NMR data. The absolute configuration of 9 was assigned by the single-crystal X-ray diffraction studies. Compounds 1-11 and 15 showed significant cytotoxicity against the Sf9 cells from S. frugiperda.

  18. Biological control of cyathostomin (Nematoda: Cyathostominae) with nematophagous fungus Monacrosporium thaumasium in tropical southeastern Brazil.

    PubMed

    Tavela, Alexandre de Oliveira; Araújo, Jackson Victor; Braga, Fábio Ribeiro; Silva, André Ricardo; Carvalho, Rogério Oliva; Araujo, Juliana Milani; Ferreira, Sebastião Rodrigo; Carvalho, Giovanni Ribeiro

    2011-01-10

    Horses are hosts to a wide variety of helminthes; the most important are the cyathostomin, or small strongyles. The viability of a fungal formulation (pellets) using the nematode-trapping fungus Monacrosporium thaumasium was assessed in biological control of horse cyathostomin. Two groups (fungus-treated and control) consisted of six mares in each group, crossbred (ages of 2.5 and 3.5 years), were placed in pastures of Cynodon sp. naturally infected with horse cyathostomin larvae. In the treated group, each animal received 1g/10 kg body weight (0.2g/10 kg live weight of fungus) of pellets of sodium alginate matrix containing the fungus M. thaumasium orally, twice a week for 6 months. In the control group, animals received (1g/10 kg body weight) of pellets without fungus. The egg count per gram of feces showed difference (p<0.01) in the animals treated with the fungus in relation to the control animals during all months of the experiment. The EPG percentage decrease were 87.5%, 89.7%, 68.3%, 58.7%, 52.5% and 35.2% during June, July, August, September, October and November, respectively. In faecal cultures, there was difference (p<0.05) among animals treated with fungus was found in relation to the control animals during all the experiment month, with percentage reduction of 67.5%, 61.4% and 31.8% in September, October and November, respectively. Difference (p<0.01) was observed in the recovery of infective larvae from pastures that were collected up to 20 cm from the dung pats in pastures in the group treated with the fungus in relation to the control group with a reduction of 60.9% and between 0-20 and 0-40 cm from the faecal pat reduction (p<0.01) was about 56% in the group treated with the fungus M. thaumasium in relation to the control group pasture. There was no difference (p>0.05) between the average weight gains in both animal groups. The treatment of horses with pellets containing the nematophagous fungus M. thaumasium can be effective in controlling

  19. Cascade decays of hollow ions

    SciTech Connect

    Omar, G. ); Hahn, Y. )

    1991-05-01

    A multiple-electron-emission process for atoms with one or more inner-shell vacancies is treated using the radiative- and Auger-electron-emission cascade model, in which inner-shell holes are assumed to decay by sequentially emitting radiations and/or Auger electrons. Such hollow ions are produced by synchrotron irradiation of atomic targets and in ion-surface interactions with multiple-electron transfers. The final charge-state distribution is determined by the Auger and radiative branching ratios at each stage of the decay sequence. At intermediate stages of cascade, hollow ions with more than one hole in different ionization stages are created. The Ne, Mg, and Fe{sup 14+} ions with the initial 1{ital s}, 2{ital s}, and 2{ital p} vacancies are considered in detail, and the core charge dependence of the maximum charge state is studied. The hollow Mg ion with double initial 1{ital s} holes is analyzed, and the result compared with that for the case of one 1{ital s} hole. The peak is shifted more than two units to a higher degree of ionization. The correlated shake-off and shake-up multiple-electron processes are not considered, but they are expected to cause further shifts.

  20. Baryogenesis from decaying magnetic helicity

    NASA Astrophysics Data System (ADS)

    Kamada, Kohei; Long, Andrew J.

    2016-09-01

    As a result of the Standard Model chiral anomalies, baryon number is violated in the early Universe in the presence of a hypermagnetic field with varying helicity. We investigate whether the matter/antimatter asymmetry of the Universe can be created from the decaying helicity of a primordial (hyper)magnetic field before and after the electroweak phase transition. In this model, baryogenesis occurs without (B -L )-violation, since the (B +L ) asymmetry generated by the hypermagnetic field counteracts the washout by electroweak sphalerons. At the electroweak crossover, the hypermagnetic field becomes an electromagnetic field, which does not source (B +L ). Although the sphalerons remain in equilibrium for a time, washout is avoided since the decaying magnetic helicity sources chirality. The relic baryon asymmetry is fixed when the electroweak sphaleron freezes out. Under reasonable assumptions, a baryon asymmetry of nB/s ≃4 ×10-12 can be generated from a maximally helical, right-handed (hyper)magnetic field that has a field strength of B0≃10-14 Gauss and coherence length of λ0≃1 pc today. Relaxing an assumption that relates λ0 to B0, the model predicts nB/s ≳10-10, which could potentially explain the observed baryon asymmetry of the Universe.

  1. Bs decays at the Tevatron

    SciTech Connect

    Giurgiu, Gavril; /Johns Hopkins U.

    2010-09-01

    The authors present measurements of the branching ratio and of the polarization amplitudes in charmless B{sub s} {yields} {phi}{phi} decays using data corresponding to 2.9 fb{sup -1} of integrated luminosity, collected by the CDF experiment at the Tevatron. The branching ratio in B{sub s} {yields} {phi}{phi} decays is measured relative to the normalization mode B{sub s} {yields} J/{Psi}{phi} be {Beta}(B{sub s} {yields} {phi}{phi})/{Beta}(B{sub s} {yields} J/{Psi}{phi}) = [1.78 {+-} 0.14(stat) {+-} 0.20(syst)] x 10{sup -2}. Using the experimental value of {Beta}(B{sub s} {yields} J/{Psi}{phi}) they determine the B{sub s} {yields} {phi}{phi} branching ratio {Beta}(B{sub s} {yields} {phi}{phi}) = 2.40 {+-} 0.21(stat) {+-} 0.27(syst) {+-} 0.82(BR) x 10{sup -5}. The polarization fractions are measured for the first time in this analysis and found to be: |A{sub 0}|{sup 2} = 0.348 {+-} 0.041(stat) {+-} 0.021(syst); |A{sub {parallel}}|{sup 2} = 0.287 {+-} 0.043(stat) {+-} 0.011(syst); and |A{sub {perpendicular}}|{sup 2} = 0.365 {+-} 0.044(stat) {+-} 0.027(syst).

  2. Dark Decay of the Top Quark

    SciTech Connect

    Kong, Kyoungchul; Lee, Hye-Sung; Park, Myeonghun

    2014-04-01

    We suggest top quark decays as a venue to search for light dark force carriers. The top quark is the heaviest particle in the standard model whose decays are relatively poorly measured, allowing sufficient room for exotic decay modes from new physics. A very light (GeV scale) dark gauge boson (Z') is a recently highlighted hypothetical particle that can address some astrophysical anomalies as well as the 3.6sigma deviation in the muon g-2 measurement. We present and study a possible scenario that top quark decays as t-->bW+Z's. This is the same as the dominant top quark decay (t-->bW) accompanied by one or multiple dark force carriers. The Z' can be easily boosted, and it can decay into highly collimated leptons (lepton-jet) with large branching ratio. We discuss the implications for the Large Hadron Collider experiments including the analysis based on the lepton-jets.

  3. Rare decays at the LHCb experiment

    NASA Astrophysics Data System (ADS)

    Lanfranchi, G.

    2015-01-01

    Rare flavour-changing neutral-current (FCNC) decays of beauty and charm quarks, lepton flavour- and lepton-number-violating decays can provide a powerful probe for as yet unobserved virtual particles. Recent results on these topics from the LHCb experiment are reviewed. Particular attention is paid to the angular distribution of the B^0 → K^{*0}μ^+μ^- decay, where a measurement performed by LHCb shows a local discrepancy of 3.7 standard deviations with respect to the SM prediction. Using the decay B+ → K+ π+π- γ , LHCb have also been able to demonstrate the polarisation of photons produced in b → s transitions. An update for the studies dedicated to decays τ+ → μ+ μ- μ+ and B^0_{(s)} → μ^{±} e^{∓} and to the on-shell Majorana neutrinos coupling to muons in the B+ → π- μ+ μ+ decay channel are also presented.

  4. Dark decay of the top quark

    SciTech Connect

    Kong, Kyoungchul; Lee, Hye -Sung; Park, Myeonghun

    2014-04-01

    We suggest top quark decays as a venue to search for light dark force carriers. Top quark is the heaviest particle in the standard model whose decays are relatively poorly measured, allowing sufficient room for exotic decay modes from new physics. A very light (GeV scale) dark gauge boson (Z') is a recently highlighted hypothetical particle that can address some astrophysical anomalies as well as the 3.6 σ deviation in the muon g-2 measurement. We present and study a possible scenario that top quark decays as t → b W + Z's. This is the same as the dominant top quark decay (t → b W) accompanied by one or multiple dark force carriers. The Z' can be easily boosted, and it can decay into highly collimated leptons (lepton-jet) with large branching ratio. In addition, we discuss the implications for the Large Hadron Collider experiments including the analysis based on the lepton-jets.

  5. The distribution of sunspot decay rates

    NASA Astrophysics Data System (ADS)

    Martinez Pillet, V.; Moreno-Insertis, F.; Vazquez, M.

    1993-07-01

    The distribution of sunspot decay rates is studied using the Greenwich Photoheliographic Results (GPR) for a total of approximately hundred years between 1874 and 1976. The decay rates are seen to be lognormally distributed. The discrepancies between the decay rates given in the past by different authors are shown to originate as a consequence of this asymmetric distribution. It is pointed out that the extended tails shown by the lognormal distributions are associated to spots decaying much faster than suggested by Bumba's (1963) work. A cycle by cycle analysis of the lognormal distributions associated with each sunspot group type and for single spots is presented. The differences between the nine solar cycles involved are studied. As a remarkable property of the decay process, we show that it happens at a nearly constant total to umbral area ratio. This property holds for decaying spots which are still large enough to show a penumbra. We have studied the suitability of a decay law with the instantaneous decay rate proportional to the length of the spot boundary. This law predicts a parabolic decay pattern with some specific characteristics. No definite conclusion in favour of this law is reached, but it is suggested that a linear decay is as weakly supported by the GPR data as a peripheral one. On the other hand, weak non-linearities are seen in the decay of isolated spots with a clear tendency to produce a convex pattern in the area vs. time diagram. The implication is that sunspot decay is braked as time proceeds.

  6. Fungi of Coconut (Cocos nucifera L.)-Their Deteriorative Ability, Quality Stability and the Role of the Fungus-Eating Insects

    NASA Astrophysics Data System (ADS)

    Chuku, E. C.; Ogbalu, O. K.; Osakwe, J. A.

    Studies on the deteriorative ability and quality stability of coconut (Cocos nucifera L.) and the effect of the fungus-eating insects (Necrobia rufipes, Alphitobius diaperinus, Crematogaster sp. and Tenebrio molitor) were carried out in the Post Graduate Entomology and Plant Pathology Laboratories of the Department of Applied and Environmental Biology and also in Food Science Laboratory of the Rivers State University of Science and Technology, Port Harcourt. Results showed Aspergillus niger van Tieghem, Rhizopus stolonifer Lind and Penicillium italiucum Wehmer as the seed-borne fungi of coconut. Frequency of occurrence was 80% for Aspergillus niger and 100% for both Rhizopus stolonifer and Penicillium italicum. On storage stability, heat drying offered significantly higher protection to coconut copra. Percentage consumption of fungal hyphae by the fungus-eating insects varied with Tenebrio molitor consuming 100% of the three aforementioned fungi. A. diaperinius contributed up to 84.1% reduction of A. niger as against 80.3% reduction by Necrobia rufipes of A. niger, Crematogaster sp. offered the least reduction (64.2%).

  7. Spectroscopy of element 115 decay chains

    SciTech Connect

    Rudolph, Dirk; Forsberg, U.; Golubev, P.; Sarmiento, L. G.; Yakushev, A.; Andersson, L.-L.; Di Nitto, A.; Duehllmann, Ch. E.; Gates, J. M.; Gregorich, K. E.; Gross, Carl J; Hessberger, F. P.; Herzberg, R.-D; Khuyagbaatar, J.; Kratz, J. V.; Rykaczewski, Krzysztof Piotr; Schaedel, M.; Aberg, S.; Ackermann, D.; Block, M.; Brand, H.; Carlsson, B. G.; Cox, D.; Derkx, X.; Eberhardt, K.; Even, J.; Fahlander, C.; Gerl, J.; Jaeger, E.; Kindler, B.; Krier, J.; Kojouharov, I.; Kurz, N.; Lommel, B.; Mistry, A.; Mokry, C.; Nitsche, H.; Omtvedt, J. P.; Papadakis, P.; Ragnarsson, I.; Runke, J.; Schaffner, H.; Schausten, B.; Thoerle-Pospiech, P.; Torres, T.; Traut, T.; Trautmann, N.; Tuerler, A.; Ward, A.; Ward, D. E.; Wiehl, N.

    2013-01-01

    A high-resolution a, X-ray and -ray coincidence spectroscopy experiment was conducted at the GSI Helmholtzzentrum fu r Schwerionenforschung. Thirty correlated a-decay chains were detected following the fusion-evaporation reaction 48Ca + 243Am. The observations are consistent with previous assignments of similar decay chains to originate from element Z = 115. The data includes first candidates of fingerprinting the decay step Mt --> Bh with characteristic X rays. For the first time, precise spectroscopy allows the derivation of excitation schemes of isotopes along the decay chains starting with elements Z > 112. Comprehensive Monte-Carlo simulations accompany the data analysis. Nuclear structure models provide a first level interpretation.

  8. 7 CFR 51.898 - Decay.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... FRESH FRUITS, VEGETABLES AND OTHER PRODUCTS 1,2 (INSPECTION, CERTIFICATION, AND STANDARDS) United States.... Slight surface development of green mold (Cladosporium) shall not be considered decay....

  9. Unique forbidden beta decays and neutrino mass

    SciTech Connect

    Dvornický, Rastislav; Šimkovic, Fedor

    2015-10-28

    The measurement of the electron energy spectrum in single β decays close to the endpoint provides a direct determination of the neutrino masses. The most sensitive experiments use β decays with low Q value, e.g. KATRIN (tritium) and MARE (rhenium). We present the theoretical spectral shape of electrons emitted in the first, second, and fourth unique forbidden β decays. Our findings show that the Kurie functions for these unique forbidden β transitions are linear in the limit of massless neutrinos like the Kurie function of the allowed β decay of tritium.

  10. Higgs decays and brane gravi-vectors

    SciTech Connect

    Clark, T. E.; Liu Boyang; Love, S. T.; Xiong, C.; Veldhuis, T. ter

    2008-10-01

    Higgs boson decays in flexible brane world models with stable, massive gravi-vectors are considered. Such vectors couple bilinearly to the standard model fields through either the standard model energy-momentum tensor, the weak hypercharge field strength, or the Higgs scalar. The role of the coupling involving the extrinsic curvature is highlighted. It is found that within the presently allowed parameter space, the decay rate of the Higgs into two gravi-vectors (which would appear as an invisible Higgs decay) can be comparable to the rate for any of the standard model decay modes.

  11. Effects of a decaying cosmological fluctuation.

    PubMed

    Amendola, Luca; Finelli, Fabio

    2005-06-10

    We present the initial conditions for a decaying cosmological perturbation and study its signatures in the cosmic microwave background anisotropies and matter power spectra. An adiabatic decaying mode in the presence of components that are not described as perfect fluids (such as collisionless matter) decays slower than in a perfect-fluid dominated Universe and displays super-Hubble oscillations. Wilkinson Microwave Anisotropy Probe first year data constrain the decaying to growing ratio of scale invariant adiabatic fluctuations at the matter-radiation equality to less than 10%.

  12. Properties of a Decaying Sunspot

    NASA Astrophysics Data System (ADS)

    Balthasar, H.; Beck, C.; Gömöry, P.; Muglach, K.; Puschmann, K. G.; Shimizu, T.; Verma, M.

    A small decaying sunspot was observed with the Vacuum Tower Telescope (VTT) on Tenerife and the Japanese Hinode satellite. We obtained full Stokes scans in several wavelengths covering different heights in the solar atmosphere. Imaging time series from Hinode and the Solar Dynamics Observatory (SDO) complete our data sets. The spot is surrounded by a moat flow, which persists also on that side of the spot where the penumbra already had disappeared. Close to the spot, we find a chromospheric location with downflows of more than 10 km s^{-1} without photospheric counterpart. The height dependence of the vertical component of the magnetic field strength is determined in two different ways that yielded different results in previous investigations. Such a difference still exists in our present data, but it is not as pronounced as in the past.

  13. Protonium decay and phase space

    NASA Astrophysics Data System (ADS)

    Vandermeulen, J.

    1992-09-01

    Nucleon-antinucleon at rest presents a variety of channels, where wide mesons often interfere, as shown by the analysis of protonium decay into three pions by the Asterix and Crystal Barrel experiments. A statistical model for emission of the narrow mesons π, η, η' ω, K, ¯K is presented to account for the general profile of the reaction. It is an alternative to a model based on two-doorway state dominance proposed earlier. It allows direct prediction with phenomenological channels, but deals only with branching ratios, not with the detailed structure of the final states. The initial state interactions do not influence the bulk of predictions, although they matter for two-particle branching ratios, which are small. The model is in reasonable agreement with present experimental data and is offered as a standard for comparison with forthcoming results. Some obvious deviations claim for a dynamical explanation.

  14. Decaying neutrinos in galaxy clusters

    NASA Technical Reports Server (NTRS)

    Melott, Adrian L.; Splinter, Randall J.; Persic, Massimo; Salucci, Paolo

    1994-01-01

    Davidsen et al. (1991) have argued that the failure to detect UV photons from the dark matter (DM) in cluster A665 excludes the decaying neutrino hypothesis. Sciama et al. (1993) argued that because of high central concentration the DM in that cluster must be baryonic. We study the DM profile in clusters of galaxies simulated using the Harrison-Zel'dovich spectrum of density fluctuations, and an amplitude previously derived from numerical simulations (Melott 1984b; Anninos et al. 1991) and in agreement with microwave background fluctuations (Smoot et al. 1992). We find that with this amplitude normalization cluster neutrino DM densities are comparable to observed cluster DM values. We conclude that given this normalization, the cluster DM should be at least largely composed of neutrinos. The constraint of Davidsen et al. can be somewhat weakened by the presence of baryonic DM; but it cannot be eliminated given our assumptions.

  15. Decaying neutrinos in galaxy clusters

    NASA Technical Reports Server (NTRS)

    Melott, Adrian L.; Splinter, Randall J.; Persic, Massimo; Salucci, Paolo

    1993-01-01

    The DM profile in clusters of galaxies was studied and simulated using the Harrison-Zel'dovich spectrum of density fluctuations, and an amplitude previously derived from numerical simulations and in agreement with microwave background fluctuations. Neutrino DM densities, with this amplitude normalization cluster, are comparable to observed cluster DM values. It was concluded that given this normalization, the cluster DM should be al least largely composed of neutrinos. The constraint of Davidson et al., who argued that the failure to detect uv photons from the dark matter (DM) in cluster A665 excludes the decaying neutrino hypothesis, could be somewhat weakened by the presence of baryonic DM; but it cannot be eliminated given our assumptions.

  16. Five New Cytotoxic Metabolites from the Marine Fungus Neosartorya pseudofischeri

    PubMed Central

    Lan, Wen-Jian; Fu, Sheng-Jiao; Xu, Meng-Yang; Liang, Wan-Ling; Lam, Chi-Keung; Zhong, Guo-Hua; Xu, Jun; Yang, De-Po; Li, Hou-Jin

    2016-01-01

    The marine fungus Neosartorya pseudofischeri was isolated from Acanthaster planci from the South China Sea. In a preliminary bioactivity screening, the crude methanol extract of the fungal mycelia showed significant inhibitory activity against the Sf9 cell line from the fall armyworm Spodoptera frugiperda. Five novel compounds, including 5-olefin phenylpyropene A (1), 13-dehydroxylpyripyropene A (4), deacetylsesquiterpene (7), 5-formyl-6-hydroxy-8-isopropyl-2- naphthoic acid (9) and 6,8-dihydroxy-3-((1E,3E)-penta-1,3-dien-1-yl)isochroman-1-one (10), together with eleven known compounds, phenylpyropene A (2) and C (3), pyripyropene A (5), 7-deacetylpyripyropene A (6), (1S,2R,4aR,5R,8R,8aR)-1,8a-dihydroxy-2-acetoxy-3,8-dimethyl-5- (prop-1-en-2-yl)-1,2,4a, 5,6,7,8,8a-octahydronaphthalene (8), isochaetominine C (11), trichodermamide A (12), indolyl-3-acetic acid methyl ester (13), 1-acetyl-β-carboline (14), 1,2,3,4-tetrahydro-6-hydroxyl-2-methyl-l,3,4-trioxopyrazino[l,2-a]-indole (15) and fumiquinazoline F (16), were obtained. The structures of these compounds were determined mainly by MS and NMR data. The absolute configuration of 9 was assigned by the single-crystal X-ray diffraction studies. Compounds 1–11 and 15 showed significant cytotoxicity against the Sf9 cells from S. frugiperda. PMID:26771621

  17. Genome Characterization of the Oleaginous Fungus Mortierella alpina

    PubMed Central

    Feng, Yun; Ren, Yan; Gu, Zhennan; Chen, Haiqin; Wang, Hongchao; Thomas, Michael J.; Zhang, Baixi; Berquin, Isabelle M.; Li, Yang; Wu, Jiansheng; Zhang, Huanxin; Song, Yuanda; Liu, Xiang; Norris, James S.; Wang, Suriguga; Du, Peng; Shen, Junguo; Wang, Na; Yang, Yanlin; Wang, Wei; Feng, Lu; Ratledge, Colin; Zhang, Hao; Chen, Yong Q.

    2011-01-01

    Mortierella alpina is an oleaginous fungus which can produce lipids accounting for up to 50% of its dry weight in the form of triacylglycerols. It is used commercially for the production of arachidonic acid. Using a combination of high throughput sequencing and lipid profiling, we have assembled the M. alpina genome, mapped its lipogenesis pathway and determined its major lipid species. The 38.38 Mb M. alpina genome shows a high degree of gene duplications. Approximately 50% of its 12,796 gene models, and 60% of genes in the predicted lipogenesis pathway, belong to multigene families. Notably, M. alpina has 18 lipase genes, of which 11 contain the class 2 lipase domain and may share a similar function. M. alpina's fatty acid synthase is a single polypeptide containing all of the catalytic domains required for fatty acid synthesis from acetyl-CoA and malonyl-CoA, whereas in many fungi this enzyme is comprised of two polypeptides. Major lipids were profiled to confirm the products predicted in the lipogenesis pathway. M. alpina produces a complex mixture of glycerolipids, glycerophospholipids and sphingolipids. In contrast, only two major sterol lipids, desmosterol and 24(28)-methylene-cholesterol, were detected. Phylogenetic analysis based on genes involved in lipid metabolism suggests that oleaginous fungi may have acquired their lipogenic capacity during evolution after the divergence of Ascomycota, Basidiomycota, Chytridiomycota and Mucoromycota. Our study provides the first draft genome and comprehensive lipid profile for M. alpina, and lays the foundation for possible genetic engineering of M. alpina to produce higher levels and diverse contents of dietary lipids. PMID:22174787

  18. Five New Cytotoxic Metabolites from the Marine Fungus Neosartorya pseudofischeri.

    PubMed

    Lan, Wen-Jian; Fu, Sheng-Jiao; Xu, Meng-Yang; Liang, Wan-Ling; Lam, Chi-Keung; Zhong, Guo-Hua; Xu, Jun; Yang, De-Po; Li, Hou-Jin

    2016-01-01

    The marine fungus Neosartorya pseudofischeri was isolated from Acanthaster planci from the South China Sea. In a preliminary bioactivity screening, the crude methanol extract of the fungal mycelia showed significant inhibitory activity against the Sf9 cell line from the fall armyworm Spodoptera frugiperda. Five novel compounds, including 5-olefin phenylpyropene A (1), 13-dehydroxylpyripyropene A (4), deacetylsesquiterpene (7), 5-formyl-6-hydroxy-8-isopropyl-2- naphthoic acid (9) and 6,8-dihydroxy-3-((1E,3E)-penta-1,3-dien-1-yl)isochroman-1-one (10), together with eleven known compounds, phenylpyropene A (2) and C (3), pyripyropene A (5), 7-deacetylpyripyropene A (6), (1S,2R,4aR,5R,8R,8aR)-1,8a-dihydroxy-2-acetoxy-3,8-dimethyl-5- (prop-1-en-2-yl)-1,2,4a, 5,6,7,8,8a-octahydronaphthalene (8), isochaetominine C (11), trichodermamide A (12), indolyl-3-acetic acid methyl ester (13), 1-acetyl-β-carboline (14), 1,2,3,4-tetrahydro-6-hydroxyl-2-methyl-l,3,4-trioxopyrazino[l,2-a]-indole (15) and fumiquinazoline F (16), were obtained. The structures of these compounds were determined mainly by MS and NMR data. The absolute configuration of 9 was assigned by the single-crystal X-ray diffraction studies. Compounds 1-11 and 15 showed significant cytotoxicity against the Sf9 cells from S. frugiperda. PMID:26771621

  19. Peroxisome dynamics during development of the fungus Podospora anserina.

    PubMed

    Takano-Rojas, Harumi; Zickler, Denise; Peraza-Reyes, Leonardo

    2016-01-01

    Peroxisomes are versatile and dynamic organelles that are required for the development of diverse eukaryotic organisms. We demonstrated previously that in the fungus Podospora anserina different peroxisomal functions are required at distinct stages of sexual development, including the initiation and progression of meiocyte (ascus) development and the differentiation and germination of sexual spores (ascospores). Peroxisome assembly during these processes relies on the differential activity of the protein machinery that drives the import of proteins into the organelle, indicating a complex developmental regulation of peroxisome formation and activity. Here we demonstrate that peroxisome dynamics is also highly regulated during development. We show that peroxisomes in P. anserina are highly dynamic and respond to metabolic and environmental cues by undergoing changes in size, morphology and number. In addition, peroxisomes of vegetative and sexual cell types are structurally different. During sexual development peroxisome number increases at two stages: at early ascus differentiation and during ascospore formation. These processes are accompanied by changes in peroxisome structure and distribution, which include a cell-polarized concentration of peroxisomes at the beginning of ascus development, as well as a morphological transition from predominantly spherical to elongated shapes at the end of the first meiotic division. Further, the mostly tubular peroxisomes present from second meiotic division to early ascospore formation again become rounded during ascospore differentiation. Ultimately the number of peroxisomes dramatically decreases upon ascospore maturation. Our results reveal a precise regulation of peroxisome dynamics during sexual development and suggest that peroxisome constitution and function during development is defined by the coordinated regulation of the proteins that control peroxisome assembly and dynamics.

  20. Pathogenic Fungus Microsporum canis Activates the NLRP3 Inflammasome

    PubMed Central

    Mao, Liming; Zhang, Liping; Li, Hua; Chen, Wei; Wang, Hongbin; Wu, Shuxian; Guo, Caiqin; Lu, Ailing; Yang, Guiwen; An, Liguo

    2014-01-01

    Microsporum canis is a pathogenic fungus with worldwide distribution that causes tinea capitis in animals and humans. M. canis also causes invasive infection in immunocompromised patients. To defy pathogenic fungal infection, the host innate immune system is the first line of defense. As an important arm of innate immunity, the inflammasomes are intracellular multiprotein complexes that control the activation of caspase-1, which cleaves proinflammatory cytokine pro-interleukin-1β (IL-1β) into its mature form. To determine whether the inflammasome is involved in the host defense against M. canis infection, we challenged human monocytic THP-1 cells and mouse dendritic cells with a clinical strain of M. canis isolated from patients with tinea capitis. We found that M. canis infection triggered rapid secretion of IL-1β from both THP-1 cells and mouse dendritic cells. Moreover, by using gene-specific shRNA and competitive inhibitors, we determined that M. canis-induced IL-1β secretion was dependent on NLRP3. The pathways proposed for NLRP3 inflammasome activation, namely, cathepsin B activity, K+ efflux, and reactive oxygen species production, were all required for the inflammasome activation triggered by M. canis. Meanwhile, Syk, Dectin-1, and Card9 were found to be involved in M. canis-induced IL-1β secretion via regulation of pro-IL-1β transcription. More importantly, our data revealed that M. canis-induced production of IL-1β was dependent on the NLRP3 inflammasome in vivo. Together, this study unveils that the NLRP3 inflammasome exerts a critical role in host innate immune responses against M. canis infection, and our data suggest that diseases that result from M. canis infection might be controlled by regulating the activation of inflammasomes. PMID:24478101

  1. New Physics in B decays

    NASA Astrophysics Data System (ADS)

    Crivellin, Andreas

    2016-04-01

    While the LHC did not observe direct evidence for physics beyond the standard model, indirect hints for new physics were uncovered in the flavour sector in the decays B → K*µ+ µ-, B → Kµ+ µ-/B → Ke+e-, Bs → øµ+µ-, B → D(*) τv and h → τ±µ∓. Each observable deviates from the SM predictions at the 2 - 3σ level only, but combining all b → sµ+µ- data via a global fit, one finds 4 - 5 σ difference for NP compared to the SM and combining B → D* τv with B → Dτv one obtains 3:9 σ. While B → D(*) τv and h → τv can be naturally explained by an extended Higgs sector, the b → sµ+µ- anomalies point at a Z' gauge boson. However, it is also possible to explain B → D(*) τv and b → sµ+ µ- simultaneously with leptoquarks while their effect in h → τ±µ∓ is far too small to account for current data. Combining a 2HDM with a gauged Lµ - Lτ symmetry allows for explaining the b → sµ+ µ- anomalies in combination with h → τ±µ∓, predicting interesting correlations with τ → 3µ. In the light of these deviations from the SM we also discuss the possibilities of observing lepton flavour violating B decays (e.g. B → K(*) τ±µ∓ and Bs → τ±µ∓).

  2. Differential growth of the fungus Absidia cylindrospora on 13C/15N-labelled media.

    PubMed

    Crotty, F V; Blackshaw, R P; Murray, P J

    2011-06-15

    Many studies utilise enrichment of stable isotopes as tracers to follow the interactions occurring within soil food webs and methods have been developed to enrich bacteria, soil fauna and plant litter, Here for the first time we attempt to enrich a soil fungus to 99 atom% with (13)C and (15)N stable isotopes. In this study our objectives were to (a) assess whether the saprotrophic zygomycete fungus Absidia cylindrospora could grow on a medium enriched to 99 atom% with (13)C-glucose and (15)N-ammonium chloride, (b) to determine the level of enrichment obtained, and (c) to examine the change in growth rate of this fungus while it was growing on the dually enriched medium. To achieve this, the fungus was grown on agar enriched with (13)C and (15)N to 99 atom% and its growth rate monitored. The results showed that A. cylindrospora would grow on the highly labelled growth medium, but that its rate of growth was affected compared with the rate on either natural abundance media or media highly enriched with a single isotope ((13)C or (15)N). The implications of these results is that although the fungus is able to utilise these heavier isotopes, the biochemical processes involved in growth are affected, and consideration should be given to these differences when using stable isotope tracers in, for example, soil food web studies.

  3. Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens

    SciTech Connect

    Aylward, Frank O.; Burnum, Kristin E.; Scott, Jarrod J.; Suen, Garret; Tringe, Susannah G.; Adams, Sandra M.; Barry, Kerrie W.; Nicora, Carrie D.; Piehowski, Paul D.; Purvine, Samuel O.; Starrett, Gabriel J.; Goodwin, Lynne A.; Smith, Richard D.; Lipton, Mary S.; Currie, Cameron R.

    2012-09-01

    Herbivores gain access to nutrients stored in plant biomass largely by harnessing the metabolic activities of microbes. Leaf-cutter ants of the genus Atta are a hallmark example; these dominant Neotropical herbivores cultivate symbiotic fungus gardens on massive quantities of fresh plant forage. As the external digestive system of the ants, fungus gardens facilitate the production and sustenance of millions of workers in mature Atta colonies. Here we use metagenomic, and metaproteomic techniques to characterize the bacterial diversity and overall physiological potential of fungus gardens from two species of Atta. Our analysis of over 1.2 Gbp of community metagenomic sequence and three 16S pyrotag libraries reveals that, in addition to harboring the dominant fungal crop, these ecosystems contain abundant populations of Enterobacteriaceae, including the genera Enterobacter, Pantoea, Klebsiella, Citrobacter, and Escherichia. We show that these bacterial communities possess genes commonly associated with lignocellulose degradation, and likely participate in the processing of plant biomass. Additionally, we demonstrate that bacteria in these environments encode a diverse suite of biosynthetic pathways, and that they may enrich the nitrogen-poor forage of the ants with B-vitamins, amino acids, and proteins. These results are consistent with the hypothesis that fungus gardens are highly-specialized fungus-bacteria communities that efficiently convert plant material into usable energy for their ant hosts. Together with recent investigations into the microbial symbionts of vertebrates, our work underscores the importance of microbial communities to the ecology and evolution of herbivorous metazoans.

  4. The hidden habit of the entomopathogenic fungus Beauveria bassiana: first demonstration of vertical plant transmission.

    PubMed

    Quesada-Moraga, Enrique; López-Díaz, Cristina; Landa, Blanca Beatriz

    2014-01-01

    Beauveria bassiana strain 04/01-Tip, obtained from a larva of the opium poppy stem gall wasp Iraella luteipes (Hymenoptera; Cynipidae), endophytically colonizes opium poppy (Papaver somniferum L.) plants and protects them against this pest. The goal of this study was to monitor the dynamics of endophytic colonization of opium poppy by B. bassiana after the fungus was applied to the seed and to ascertain whether the fungus is transmitted vertically via seeds. Using a species-specific nested PCR protocol and DNA extracted from surface-sterilised leaf pieces or seeds of B. bassiana-inoculated opium poppy plants, the fungus was detected within the plant beginning at the growth stage of rosette building and them throughout the entire plant growth cycle (about 120-140 days after sowing). The fungus was also detected in seeds from 50% of the capsules sampled. Seeds that showed positive amplification for B. bassiana were planted in sterile soil and the endophyte was again detected in more than 42% of the plants sampled during all plant growth stages. Beauveria bassiana was transmitted to seeds in 25% of the plants from the second generation that formed a mature capsule. These results demonstrate for the first time the vertical transmission of an entomopathogenic fungus from endophytically colonised maternal plants. This information is crucial to better understand the ecological role of entomopathogenic fungi as plant endophytes and may allow development of a sustainable and cost effective strategy for I. luteipes management in P. somniferum.

  5. The Hidden Habit of the Entomopathogenic Fungus Beauveria bassiana: First Demonstration of Vertical Plant Transmission

    PubMed Central

    Quesada-Moraga, Enrique; López-Díaz, Cristina; Landa, Blanca Beatriz

    2014-01-01

    Beauveria bassiana strain 04/01-Tip, obtained from a larva of the opium poppy stem gall wasp Iraella luteipes (Hymenoptera; Cynipidae), endophytically colonizes opium poppy (Papaver somniferum L.) plants and protects them against this pest. The goal of this study was to monitor the dynamics of endophytic colonization of opium poppy by B. bassiana after the fungus was applied to the seed and to ascertain whether the fungus is transmitted vertically via seeds. Using a species-specific nested PCR protocol and DNA extracted from surface-sterilised leaf pieces or seeds of B. bassiana-inoculated opium poppy plants, the fungus was detected within the plant beginning at the growth stage of rosette building and them throughout the entire plant growth cycle (about 120–140 days after sowing). The fungus was also detected in seeds from 50% of the capsules sampled. Seeds that showed positive amplification for B. bassiana were planted in sterile soil and the endophyte was again detected in more than 42% of the plants sampled during all plant growth stages. Beauveria bassiana was transmitted to seeds in 25% of the plants from the second generation that formed a mature capsule. These results demonstrate for the first time the vertical transmission of an entomopathogenic fungus from endophytically colonised maternal plants. This information is crucial to better understand the ecological role of entomopathogenic fungi as plant endophytes and may allow development of a sustainable and cost effective strategy for I. luteipes management in P. somniferum. PMID:24551242

  6. Palaeoanellus dimorphus gen. et sp. nov. (Deuteromycotina): a Cretaceous predatory fungus.

    PubMed

    Schmidt, Alexander R; Dörfelt, Heinrich; Perrichot, Vincent

    2008-10-01

    In habitats where nitrogen is the limiting factor, carnivorous fungi gain an advantage by preying on nematodes and other microorganisms. These fungi are abundant in modern terrestrial ecosystems, but they are not predestined for preservation as fossils. Conclusions on their evolutionary history are therefore mainly based on molecular studies that are generally limited to those taxa that have survived until today. Here we present a fossil dimorphic fungus that was found in Late Albian amber from southwestern France. This fungus possessed unicellular hyphal rings as trapping devices and formed blastospores from which a yeast stage developed. The fossil probably represents an anamorph of an ascomycete and is described as Palaeoanellus dimorphus gen. et sp. nov. Because predatory fungi with regular yeast stages are not known from modern ecosystems, the fungus is assumed to not be related to any Recent carnivorous fungus and to belong to an extinct lineage of carnivorous fungi. The inclusions represent the only record of fossil fungi that developed trapping devices, so far. The fungus lived c. 100 million years ago in a limnetic-terrestrial microhabitat, and it was a part of a highly diverse biocenosis at the forest floor of a Cretaceous coastal amber forest. PMID:21632336

  7. Biodegradation of crystal violet by the white rot fungus Phanerochaete chrysosporium.

    PubMed Central

    Bumpus, J A; Brock, B J

    1988-01-01

    Biodegradation of crystal violet (N,N,N',N',N'',N''-hexamethylpararosaniline) in ligninolytic (nitrogen-limited) cultures of the white rot fungus Phanerochaete chrysosporium was demonstrated by the disappearance of crystal violet and by the identification of three metabolites (N,N,N',N',N''-pentamethylpararosaniline, N,N,N',N''-tetramethylpararosaniline, and N,N',N''-trimethylpararosaniline) formed by sequential N-demethylation of the parent compound. Metabolite formation also occurred when crystal violet was incubated with the extracellular fluid obtained from ligninolytic cultures of this fungus, provided that an H2O2-generating system was supplied. This, as well as the fact that a purified ligninase catalyzed N-demethylation of crystal violet, demonstrated that biodegradation of crystal violet by this fungus is dependent, at least in part, upon its lignin-degrading system. In addition to crystal violet, six other triphenylmethane dyes (pararosaniline, cresol red, bromphenol blue, ethyl violet, malachite green, and brilliant green) were shown to be degraded by the lignin-degrading system of this fungus. An unexpected result was the finding that substantial degradation of crystal violet also occurred in nonligninolytic (nitrogen-sufficient) cultures of P. chrysosporium, suggesting that in addition to the lignin-degrading system, another mechanism exists in this fungus which is also able to degrade crystal violet. PMID:3389809

  8. Appressorium formation in the corn smut fungus Ustilago maydis requires a G2 cell cycle arrest.

    PubMed

    Castanheira, Sónia; Pérez-Martín, José

    2015-01-01

    Many of the most important plant diseases are caused by fungal pathogens that form specialized cell structures to breach the leaf surface as well as to proliferate inside the plant. To initiate pathogenic development, the fungus responds to a set of inductive cues. Some of them are of extracellular nature (environmental signals) while others respond to intracellular conditions (developmental signals). These signals have to be integrated into a single response that has as a major outcome changes in the morphogenesis of the fungus. The cell cycle regulation is pivotal during these cellular differentiations, and we hypothesized that cell cycle regulation would be likely to provide control points for infection development by fungal pathogens. Although efforts have been done in various fungal systems, there is still limited information available regarding the relationship of these processes with the induction of the virulence programs. Hence, the role of fungal cell cycle regulators -which are wide conserved elements- as true virulence factors, has yet to be defined. Here we discuss the recent finding that the formation of the appressorium, a structure required for plant penetration, in the corn smut fungus Ustilago maydis seems to be incompatible with an active cell cycle and, therefore genetic circuits evolved in this fungus to arrest the cell cycle during the growth of this fungus on plant surface, before the appressorium-mediated penetration into the plant tissue.

  9. The fungus gardens of leaf-cutter ants undergo a distinct physiological transition during biomass degradation.

    PubMed

    Huang, Eric L; Aylward, Frank O; Kim, Young-Mo; Webb-Robertson, Bobbie-Jo M; Nicora, Carrie D; Hu, Zeping; Metz, Thomas O; Lipton, Mary S; Smith, Richard D; Currie, Cameron R; Burnum-Johnson, Kristin E

    2014-08-01

    Leaf-cutter ants are dominant herbivores in ecosystems throughout the Neotropics that feed on fungus gardens cultivated on fresh foliar biomass. Although recent investigations have shed light on how plant biomass is degraded in fungus gardens, the cycling of nutrients that takes place in these specialized microbial ecosystems is still not well understood. Here, using metabolomic and metaproteomic techniques, we examine the dynamics of nutrient turnover in these gardens. Our results reveal that numerous free amino acids and sugars are depleted throughout the process of biomass degradation, indicating that easily accessible nutrients from plant material are readily consumed by microbes in these ecosystems. Accumulation of cellobiose and lignin derivatives near the end of the degradation process is consistent with previous characterization of lignocellulases produced by the fungal cultivar of the ants. Our results also suggest that ureides may be an important source of nitrogen in fungus gardens, especially during nitrogen-limiting conditions. No free arginine was detected in our metabolomic experiments despite evidence that the host ants cannot produce this amino acid, suggesting that biosynthesis of this metabolite may be tightly regulated in fungus gardens. These results provide new insights into microbial community-level processes that underlie this important ant-fungus symbiosis.

  10. beta. -decay asymmetry of the free neutron

    SciTech Connect

    Bopp, P.; Dubbers, D.; Klemt, E.; Last, J.; Schuetze, H.; Weibler, W.; Freedman, S.J.; Schaerpf, O.

    1983-01-01

    The ..beta..-decay of polarized neutrons has been studied with the new superconducting spectrometer PERKEO at the ILL. The energy dependence of the ..beta..-decay asymmetry has been measured for the first time. From the measured ..beta..-asymmetry parameter we obtain a new value for the ratio of weak coupling constants g/sub A//g/sub V/. 11 references.

  11. QCD in heavy quark production and decay

    SciTech Connect

    Wiss, J.

    1997-06-01

    The author discusses how QCD is used to understand the physics of heavy quark production and decay dynamics. His discussion of production dynamics primarily concentrates on charm photoproduction data which are compared to perturbative QCD calculations which incorporate fragmentation effects. He begins his discussion of heavy quark decay by reviewing data on charm and beauty lifetimes. Present data on fully leptonic and semileptonic charm decay are then reviewed. Measurements of the hadronic weak current form factors are compared to the nonperturbative QCD-based predictions of Lattice Gauge Theories. He next discusses polarization phenomena present in charmed baryon decay. Heavy Quark Effective Theory predicts that the daughter baryon will recoil from the charmed parent with nearly 100% left-handed polarization, which is in excellent agreement with present data. He concludes by discussing nonleptonic charm decay which is traditionally analyzed in a factorization framework applicable to two-body and quasi-two-body nonleptonic decays. This discussion emphasizes the important role of final state interactions in influencing both the observed decay width of various two-body final states as well as modifying the interference between interfering resonance channels which contribute to specific multibody decays. 50 refs., 77 figs.

  12. Michel parameters in radiative muon decay

    NASA Astrophysics Data System (ADS)

    Arbuzov, A. B.; Kopylova, T. V.

    2016-09-01

    Radiative muon and tau lepton decays are described within the model-independent approach with the help of generalized Michel parameters. The exact dependence on charged lepton masses is taken into account. The results are relevant for modern and future experiments on muon and tau lepton decays.

  13. Spectroscopy and decays of charm and bottom

    SciTech Connect

    Butler, J.N.

    1997-10-01

    After a brief review of the quark model, we discuss our present knowledge of the spectroscopy of charm and bottom mesons and baryons. We go on to review the lifetimes, semileptonic, and purely leptonic decays of these particles. We conclude with a brief discussion B and D mixing and rare decays.

  14. Addressing Tooth Decay in Head Start Children

    ERIC Educational Resources Information Center

    Knowlden, Adam P.; Hill, Lawrence F.; Alles-White, Monica L.; Cottrell, Randall R.

    2012-01-01

    Tooth decay is the most prevalent chronic disease of childhood. Oral health education and dental services are crucial to reducing the number of children afflicted with dental cavities. Due to limited access to preventative care, Head Start children are particularly vulnerable to tooth decay. This article outlines practical implications of a…

  15. Crystal Ball results on tau decays

    SciTech Connect

    Lowe, S.T.

    1987-10-01

    This report reviews measurements and upper limit determinations for a number of exclusive 1-prong tau decay modes using the Crystal Ball detector. These results are important input to the apparent discrepancy between the topological and sum-of-exclusive branching fractions in 1-prong tau decays.

  16. Stick slip, charge separation and decay

    USGS Publications Warehouse

    Lockner, D.A.; Byerlee, J.D.; Kuksenko, V.S.; Ponomarev, A.V.

    1986-01-01

    Measurements of charge separation in rock during stable and unstable deformation give unexpectedly large decay times of 50 sec. Time-domain induced polarization experiments on wet and dry rocks give similar decay times and suggest that the same decay mechanisms operate in the induced polarization response as in the relaxation of charge generated by mechanical deformation. These large decay times are attributed to electrochemical processes in the rocks, and they require low-frequency relative permittivity to be very large, in excess of 105. One consequence of large permittivity, and therefore long decay times, is that a significant portion of any electrical charge generated during an earthquake can persist for tens or hundreds of seconds. As a result, electrical disturbances associated with earthquakes should be observable for these lengths of time rather than for the milliseconds previously suggested. ?? 1986 Birka??user Verlag.

  17. Searching for displaced Higgs boson decays

    NASA Astrophysics Data System (ADS)

    Csáki, Csaba; Kuflik, Eric; Lombardo, Salvator; Slone, Oren

    2015-10-01

    We study a simplified model of the Standard Model (SM) Higgs boson decaying to a degenerate pair of scalars which travel a macroscopic distance before decaying to SM particles. This is the leading signal for many well-motivated solutions to the hierarchy problem that do not propose additional light colored particles. Bounds for displaced Higgs boson decays below 10 cm are found by recasting existing tracker searches from Run I. New tracker search strategies, sensitive to the characteristics of these models and similar decays, are proposed with sensitivities projected for Run II at √{s }=13 TeV . With 20 fb-1 of data, we find that Higgs branching ratios down to 2 ×1 0-4 can be probed for centimeter decay lengths.

  18. Neutron Decay with PERC: a Progress Report

    NASA Astrophysics Data System (ADS)

    Konrad, G.; Abele, H.; Beck, M.; Drescher, C.; Dubbers, D.; Erhart, J.; Fillunger, H.; Gösselsberger, C.; Heil, W.; Horvath, M.; Jericha, E.; Klauser, C.; Klenke, J.; Märkisch, B.; Maix, R. K.; Mest, H.; Nowak, S.; Rebrova, N.; Roick, C.; Sauerzopf, C.; Schmidt, U.; Soldner, T.; Wang, X.; Zimmer, O.; Perc Collaboration

    2012-02-01

    The PERC collaboration will perform high-precision measurements of angular correlations in neutron beta decay at the beam facility MEPHISTO of the Forschungs-Neutronenquelle Heinz Maier-Leibnitz in Munich, Germany. The new beam station PERC, a clean, bright, and versatile source of neutron decay products, is designed to improve the sensitivity of neutron decay studies by one order of magnitude. The charged decay products are collected by a strong longitudinal magnetic field directly from inside a neutron guide. This combination provides the highest phase space density of decay products. A magnetic mirror serves to perform precise cuts in phase space, reducing related systematic errors. The new instrument PERC is under development by an international collaboration. The physics motivation, sensitivity, and applications of PERC as well as the status of the design and preliminary results on uncertainties in proton spectroscopy are presented in this paper.

  19. Radiative decay of the free neutron

    SciTech Connect

    Gentile, T. R.; Dewey, M. S.; Fisher, B. M.; Mumm, H. P.; Nico, J. S.; Thompson, A. K.; Chupp, T. E.; Cooper, R. L.; Kremsky, I.; Wietfeldt, F. E.; Beise, E. J.; Breuer, H.; Hood, J.; Kiriluk, K. G.; McGonagle, M.; Byrne, J.; Coakley, K. J.

    2007-10-26

    The theory of quantum electrodynamics predicts that beta decay of the neutron into a proton, electron, and antineutrino should be accompanied by a continuous spectrum of soft photons. We recently reported the first observation of this radiative decay mode of the neutron, measured by recording photons in coincidence with both the electron and proton emitted in neutron decay. The experiment was performed on the NG-6 Fundamental Physics Beam Line at the National Institute of Standards and Technology (NIST) Center for Neutron Research (NCNR). A new experiment is under development to measure both the branching ratio and energy spectrum for radiative decay with a relative standard uncertainty of a few percent. We briefly review the fundamental neutron physics program at the NCNR and describe the new radiative decay experiment.

  20. Constraining weak annihilation using semileptonic D decays

    SciTech Connect

    Ligeti, Zoltan; Luke, Michael; Manohar, Aneesh V.

    2010-08-01

    The recently measured semileptonic D{sub s} decay rate can be used to constrain weak annihilation (WA) effects in semileptonic D and B decays. We revisit the theoretical predictions for inclusive semileptonic D{sub (s)} decays using a variety of quark mass schemes. The most reliable results are obtained if the fits to B decay distributions are used to eliminate the charm quark mass dependence, without using any specific charm mass scheme. Our fit to the available data shows that WA is smaller than commonly assumed. There is no indication that the WA octet contribution (which is better constrained than the singlet contribution) dominates. The results constrain an important source of uncertainty in the extraction of |V{sub ub}| from inclusive semileptonic B decays.

  1. Leptonic and semileptonic decays of B mesons

    NASA Astrophysics Data System (ADS)

    Dingfelder, Jochen; Mannel, Thomas

    2016-07-01

    Semileptonic decays are ideally suited to study the weak interaction as well as strong interaction effects in B -meson decays. In the last decade, precision studies of semileptonic B decays have been made possible by the large samples of B mesons collected at the B factories KEKB in Japan and PEP-II in the USA. Measurements of the charged-current semileptonic transitions b →q ℓν (q =u , c ) allow for a determination of the magnitude of the Cabibbo-Kobayashi-Maskawa matrix elements Vc b and Vu b and the masses of the b and c quarks, which are fundamental parameters of the standard model of particle physics. The values of |Vc b| and |Vu b| are determined from measurements of inclusive B decays in combination with calculations of partial decay rates or from exclusive decays combined with theoretical predictions of hadronic form factors. Purely leptonic B decays B →ℓν (ℓ=e , μ , τ ) also provide access to |Vu b|. They are theoretically simpler, but the available signal samples are still small. Decays involving a τ lepton, B →τ ν and B →D(*)τ ν , are sensitive to new physics, in particular, to charged Higgs bosons in models with an extended Higgs sector, and provide a window to the physics of the third generation. In this article, the measurements and theoretical descriptions of charged-current leptonic and semileptonic B decays and the status of |Vc b| and |Vu b| determinations are reviewed. An overview of the theoretical approaches and the experimental techniques used in the study of these decays is also provided.

  2. Radiological aspect of fungus ball within a mucocele of the sphenoid sinus.

    PubMed

    Inci, M F; Ozkan, F; Aksoy, A; Kelleş, M

    2013-01-01

    Paranasal sinus fungus ball is within the non-invasive forms and is characterized by the presence of aggregated hyphae that do not invade the sinus mucosa. Mucoceles are benign, expansile, cyst-like lesions of the paranasal sinuses. The mucoid secretions of mucoceles are usually sterile. However, secondary infections, mostly bacterial, may lead to the development of pyocoeles. Although an association between a fungus ball and a mucocele is rare in the paranasal sinuses, this disease entity should be considered in the differential diagnosis of expansile, cystic sinus lesions. In this article, clinical and radiological findings of a 61-year-old male patient with isolated sphenoid sinus fungus ball within a mucocele presented with headache and periorbital pain were discussed with recent literature.

  3. Painful Bladder Syndrome: An Unusual Presentation in a Case of Upper Tract Fungus Balls

    PubMed Central

    Bajic, Petar; Wetterlin, Jessica; Bresler, Larissa

    2016-01-01

    Urinary tract fungus balls are a rare pathologic entity which may be asymptomatic or have variable presentations. To date, there have been no documented cases of fungus balls presenting as painful bladder syndrome. Painful bladder syndrome is a constellation of symptoms which may include pelvic pain, urgency and frequency not explained by other causes. Here, we present the first case of these two entities concurrently. Our patient had a longstanding history of diabetes, nephrolithiasis and recurrent urinary tract infections. He presented with symptoms of painful bladder syndrome and work-up revealed filling defects within the renal collecting system concerning for malignancy. Subsequent ureteroscopy revealed dense white debris consistent with candida fungus balls. Following clearance of the debris and antifungal therapy, our patient has remained asymptomatic. PMID:27390583

  4. Malassezia furfur: a fungus belonging to the physiological skin flora and its relevance in skin disorders.

    PubMed

    Schmidt, A

    1997-01-01

    Malassezia furfur is an anthropophilic fungus that belongs to the physiological skin flora. The fungus can grow in a yeast phase as well as in a mycelial phase; on nonaffected skin the fungus is mainly prevalent in the yeast phase. The organism has complex lipid requirements for growth, which also explains its occurrence on the skin. This also leads to the requirement for specially supplemented media for in vitro cultivation. Malassezia furfur is the causative agent of pityriasis versicolor. It also seems to be associated with seborrheic dermatitis and dandruff formation, folliculitis, confluent and reticulate papillomatosis, and the provocation of psoriatic lesions. Many substances for topical application, such as azole antimycotics, ciclopirox olamine, piroctone-olamine, zinc pyrithione, or sulfur-containing substances are effective in the treatment of these diseases. In recent years rare cases of systemic infections and fungemias caused by Malassezia have been reported. PMID:9013067

  5. Transgenic assessment of CFP-mediated cercosporin export and resistance in a cercosporin-sensitive fungus.

    PubMed

    Upchurch, Robert G; Rose, Mark S; Eweida, Mohamed; Callahan, Terrence M

    2002-04-01

    Cercosporin is a toxic polyketide produced by many phytopathogenic members of the fungal genus Cercospora. Cercospora species, themselves, exhibit the highest level of self-resistance to this almost universally toxic photosensitizer. Although the mechanism of cercosporin self-resistance is multi-faceted, partial resistance does appear to be provided by the encoded product of CFP ( cercosporin facilitator protein), a gene recently isolated from the pathogen of soybean, C. kikuchii. CFP has significant similarity to the major facilitator superfamily of integral membrane transport proteins. We expressed CFP in the cercosporin non-producing, cercosporin-sensitive fungus, Cochliobolus heterostrophus, in order to assess the transport activity of CFP and the contribution of CFP to cercosporin resistance in a fungal species free of endogenous toxin production. Expression of the CFP transgene in this fungus results in increased resistance to cercosporin due, apparently, to its export out of the fungus.

  6. Painful Bladder Syndrome: An Unusual Presentation in a Case of Upper Tract Fungus Balls.

    PubMed

    Bajic, Petar; Wetterlin, Jessica; Bresler, Larissa

    2016-05-01

    Urinary tract fungus balls are a rare pathologic entity which may be asymptomatic or have variable presentations. To date, there have been no documented cases of fungus balls presenting as painful bladder syndrome. Painful bladder syndrome is a constellation of symptoms which may include pelvic pain, urgency and frequency not explained by other causes. Here, we present the first case of these two entities concurrently. Our patient had a longstanding history of diabetes, nephrolithiasis and recurrent urinary tract infections. He presented with symptoms of painful bladder syndrome and work-up revealed filling defects within the renal collecting system concerning for malignancy. Subsequent ureteroscopy revealed dense white debris consistent with candida fungus balls. Following clearance of the debris and antifungal therapy, our patient has remained asymptomatic. PMID:27390583

  7. Interactions between hyphosphere-associated bacteria and the fungus Cladosporium herbarum on aquatic leaf litter.

    PubMed

    Baschien, Christiane; Rode, Georg; Böckelmann, Uta; Götz, Peter; Szewzyk, Ulrich

    2009-10-01

    We investigated microbial interactions of aquatic bacteria associated with hyphae (the hyphosphere) of freshwater fungi on leaf litter. Bacteria were isolated directly from the hyphae of fungi from sedimented leaves of a small stream in the National Park "Lower Oder," Germany. To investigate interactions, bacteria and fungi were pairwise co-cultivated on leaf-extract medium and in microcosms loaded with leaves. The performance of fungi and bacteria was monitored by measuring growth, enzyme production, and respiration of mono- and co-cultures. Growth inhibition of the fungus Cladosporium herbarum by Ralstonia pickettii was detected on leaf extract agar plates. In microcosms, the presence of Chryseobacterium sp. lowered the exocellulase, endocellulase, and cellobiase activity of the fungus. Additionally, the conversion of leaf material into microbial biomass was retarded in co-cultures. The respiration of the fungus was uninfluenced by the presence of the bacterium.

  8. B, D and K Decays

    SciTech Connect

    Artuso, M.; Asner, D.M.; Ball, P.; Baracchini, E.; Bell, G.; Beneke, M.; Berryhill, J.; Bevan, A.; Bigi, I.I.; Blanke, M.; Bobeth, Ch.; Bona, M.; Borzumati, F.; Browder, T.; Buanes, T.; Buchalla, G.; Buchmuller, O.; Buras, A.J.; Burdin, S.; Cassel, D.G.; Cavanaugh, R.; /Syracuse U. /Carleton U. /Durham U., IPPP /Rome U. /INFN, Rome /Karlsruhe U. /RWTH Aachen U. /Fermilab /Queen Mary, U. of London /Notre Dame U. /Munich, Tech. U. /Munich, Max Planck Inst. /Dortmund U. /Annecy, LAPP /ICTP, Trieste /Taiwan, Natl. Central U. /Hawaii U. /Bergen U. /Munich U. /CERN /Liverpool U.

    2008-03-07

    The present report documents the results of Working Group 2: B, D and K decays, of the workshop on Flavor in the Era of the LHC, held at CERN from November 2005 through March 2007. With the advent of the LHC, we will be able to probe New Physics (NP) up to energy scales almost one order of magnitude larger than it has been possible with present accelerator facilities. While direct detection of new particles will be the main avenue to establish the presence of NP at the LHC, indirect searches will provide precious complementary information, since most probably it will not be possible to measure the full spectrum of new particles and their couplings through direct production. In particular, precision measurements and computations in the realm of flavor physics are expected to play a key role in constraining the unknown parameters of the Lagrangian of any NP model emerging from direct searches at the LHC. The aim of Working Group 2 was twofold: on one hand, to provide a coherent, up-to-date picture of the status of flavor physics before the start of the LHC; on the other hand, to initiate activities on the path towards integrating information on NP from high-p{sub T} and flavor data. This report is organized as follows. In Sec. 1, we give an overview of NP models, focusing on a few examples that have been discussed in some detail during the workshop, with a short description of the available computational tools for flavor observables in NP models. Sec. 2 contains a concise discussion of the main theoretical problem in flavor physics: the evaluation of the relevant hadronic matrix elements for weak decays. Sec. 3 contains a detailed discussion of NP effects in a set of flavor observables that we identified as 'benchmark channels' for NP searches. The experimental prospects for flavor physics at future facilities are discussed in Sec. 4. Finally, Sec. 5 contains some assessments on the work done at the workshop and the prospects for future developments.

  9. Temperature Modulates the Secretome of the Phytopathogenic Fungus Lasiodiplodia theobromae

    PubMed Central

    Félix, Carina; Duarte, Ana S.; Vitorino, Rui; Guerreiro, Ana C. L.; Domingues, Pedro; Correia, António C. M.; Alves, Artur; Esteves, Ana C.

    2016-01-01

    Environmental alterations modulate host–microorganism interactions. Little is known about how climate changes can trigger pathogenic features on symbiont or mutualistic microorganisms. Current climate models predict increased environmental temperatures. The exposing of phytopathogens to these changing conditions can have particularly relevant consequences for economically important species and for humans. The impact on pathogen/host interaction and the shift on their biogeographical range can induce different levels of virulence in new hosts, allowing massive losses in agricultural and health fields. Lasiodiplodia theobromae is a phytopathogenic fungus responsible for a number of diseases in various plants. It has also been described as an opportunist pathogen in humans, causing infections with different levels of severity. L. theobromae has a high capacity of adaptation to different environments, such as woody plants, moist argillaceous soils, or even humans, being able to grow and infect hosts in a wide range of temperatures (9–39°C). Nonetheless, the effect of an increase of temperature, as predicted in climate change models, on L. theobromae is unknown. Here we explore the effect of temperature on two strains of L. theobromae – an environmental strain, CAA019, and a clinical strain, CBS339.90. We show that both strains are cytotoxic to mammalian cells but while the environmental strain is cytotoxic mainly at 25°C, the clinical strain is cytotoxic mainly at 30 and 37°C. Extracellular gelatinolytic, xylanolytic, amylolytic, and cellulolytic activities at 25 and 37°C were characterized by zymography and the secretome of both strains grown at 25, 30, and 37°C were characterized by electrophoresis and by Orbitrap LC-MS/MS. More than 75% of the proteins were identified, mostly enzymes (glycosyl hydrolases and proteases). The strains showed different protein profiles, which were affected by growth temperature. Also, strain specific proteins were identified

  10. Extraction of DNA from plant and fungus tissues in situ

    PubMed Central

    2012-01-01

    Background When samples are collected in the field and transported to the lab, degradation of the nucleic acids contained in the samples is frequently observed. Immediate extraction and precipitation of the nucleic acids reduces degradation to a minimum, thus preserving accurate sequence information. An extraction method to obtain high quality DNA in field studies is described. Findings DNA extracted immediately after sampling was compared to DNA extracted after allowing the sampled tissues to air dry at 21°C for 48 or 72 hours. While DNA extracted from fresh tissues exhibited little degradation, DNA extracted from all tissues exposed to 21°C air for 48 or 72 hours exhibited varying degrees of degradation. Yield was higher for extractions from fresh tissues in most cases. Four microcentrifuges were compared for DNA yield: one standard electric laboratory microcentrifuge (max rcf = 16,000×g), two battery-operated microcentrifuges (max rcf = 5,000 and 3,000 ×g), and one manually-operated microcentrifuge (max rcf = 120×g). Yields for all centrifuges were similar. DNA extracted under simulated field conditions was similar in yield and quality to DNA extracted in the laboratory using the same equipment. Conclusions This CTAB (cetyltrimethylammonium bromide) DNA extraction method employs battery-operated and manually-operated equipment to isolate high quality DNA in the field. The method was tested on plant and fungus tissues, and may be adapted for other types of organisms. The method produced high quality DNA in laboratory tests and under simulated field conditions. The field extraction method should prove useful for working in remote sites, where ice, dry ice, and liquid nitrogen are unavailable; where degradation is likely to occur due to the long distances between the sample site and the laboratory; and in instances where other DNA preservation and transportation methods have been unsuccessful. It may be possible to adapt this method for genomic

  11. Temperature Modulates the Secretome of the Phytopathogenic Fungus Lasiodiplodia theobromae.

    PubMed

    Félix, Carina; Duarte, Ana S; Vitorino, Rui; Guerreiro, Ana C L; Domingues, Pedro; Correia, António C M; Alves, Artur; Esteves, Ana C

    2016-01-01

    Environmental alterations modulate host-microorganism interactions. Little is known about how climate changes can trigger pathogenic features on symbiont or mutualistic microorganisms. Current climate models predict increased environmental temperatures. The exposing of phytopathogens to these changing conditions can have particularly relevant consequences for economically important species and for humans. The impact on pathogen/host interaction and the shift on their biogeographical range can induce different levels of virulence in new hosts, allowing massive losses in agricultural and health fields. Lasiodiplodia theobromae is a phytopathogenic fungus responsible for a number of diseases in various plants. It has also been described as an opportunist pathogen in humans, causing infections with different levels of severity. L. theobromae has a high capacity of adaptation to different environments, such as woody plants, moist argillaceous soils, or even humans, being able to grow and infect hosts in a wide range of temperatures (9-39°C). Nonetheless, the effect of an increase of temperature, as predicted in climate change models, on L. theobromae is unknown. Here we explore the effect of temperature on two strains of L. theobromae - an environmental strain, CAA019, and a clinical strain, CBS339.90. We show that both strains are cytotoxic to mammalian cells but while the environmental strain is cytotoxic mainly at 25°C, the clinical strain is cytotoxic mainly at 30 and 37°C. Extracellular gelatinolytic, xylanolytic, amylolytic, and cellulolytic activities at 25 and 37°C were characterized by zymography and the secretome of both strains grown at 25, 30, and 37°C were characterized by electrophoresis and by Orbitrap LC-MS/MS. More than 75% of the proteins were identified, mostly enzymes (glycosyl hydrolases and proteases). The strains showed different protein profiles, which were affected by growth temperature. Also, strain specific proteins were identified, such

  12. Biological control of horse cyathostomin (Nematoda: Cyathostominae) using the nematophagous fungus Duddingtonia flagrans in tropical southeastern Brazil.

    PubMed

    Braga, Fabio Ribeiro; Araújo, Jackson Victor; Silva, André Ricardo; Araujo, Juliana Milani; Carvalho, Rogério Oliva; Tavela, Alexandre Oliveira; Campos, Artur Kanadani; Carvalho, Giovanni Ribeiro

    2009-08-26

    The viability of a fungal formulation using the nematode-trapping fungus Duddingtonia flagrans was assessed for the biological control of horse cyathostomin. Two groups (fungus-treated and control without fungus treatment), consisting of eight crossbred mares (3-18 years of age) were fed on Cynodon sp. pasture naturally infected with equine cyathostome larvae. Each animal of the treated group received oral doses of sodium alginate mycelial pellets (1g/(10 kg live weight week)), during 6 months. Significant reduction (p<0.01) in the number of eggs per gram of feces and coprocultures was found for animals of the fungus-treated group compared with the control group. There was difference (p<0.01) of 78.5% reduction in herbage samples collected up to (0-20 cm) between the fungus-treated group and the control group, during the experimental period (May-October). Difference of 82.5% (p<0.01) was found between the fungus-treated group and the control group in the sampling distance (20-40 cm) from fecal pats. During the last 3 months of the experimental period (August, September and October), fungus-treated mares had significant weight gain (p<0.01) compared with the control group, an increment of 38 kg. The treatment with sodium alginate pellets containing the nematode-trapping fungus D. flagrans reduced cyathostomin in tropical southeastern Brazil and could be an effective tool for biological control of this parasitic nematode in horses.

  13. Draft Genome Sequence of Two Monosporidial Lines of the Karnal Bunt Fungus Tilletia indica Mitra (PSWKBGH-1 and PSWKBGH-2).

    PubMed

    Sharma, Pradeep; Tiwari, Ratan; Saharan, M S; Sharma, Indu; Kumar, Jitender; Mishra, Shefali; Muthusamy, Senthilkumar K; Gupta, R K; Jaiswal, Sarika; Iquebal, M A; Angadi, U B; Kumar, Neeraj; Fatma, Samar; Rai, Anil; Kumar, Dinesh

    2016-01-01

    Karnal bunt disease caused by the fungus Tilletia indica Mitra is a serious concern due to strict quarantines affecting international trade of wheat. We announce here the first draft assembly of two monosporidial lines, PSWKBGH-1 and -2, of this fungus, having approximate sizes of 37.46 and 37.21 Mbp, respectively. PMID:27634992

  14. Structures of flagranones A, B and C, cyclohexenoxide antibiotics from the nematode-trapping fungus Duddingtonia flagrans.

    PubMed

    Anderson, M G; Rickards, R W; Lacey, E

    1999-11-01

    Spectroscopic data define the structures of the flagranones A (2), B (3) and C (4) from the nematode-trapping fungus Duddingtonia flagrans. These antibiotics are structurally related to the farnesylated cyclohexenoxides of the oligosporon group recently isolated from the nematode-trapping fungus Arthrobotrys oligospora, and show similar antimicrobial activity.

  15. Effect of fungus gnat Bradysia impatiens (Diptera: Sciaridae) feeding on subsequent Pythium aphanidermatum infection of geranium seedlings (Pelargonium x hortorum)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dark-winged fungus gnats in the genus Bradysia (Diptera: Sciaridae) and root rot pathogens in the genus Pythium (Oomycetes) are important pests of greenhouse floriculture. Observations have pointed to a possible correlation between Pythium root rot disease and fungus gnat infestations; however, inte...

  16. Draft Genome Sequence of Two Monosporidial Lines of the Karnal Bunt Fungus Tilletia indica Mitra (PSWKBGH-1 and PSWKBGH-2)

    PubMed Central

    Sharma, Pradeep; Saharan, M. S.; Sharma, Indu; Kumar, Jitender; Mishra, Shefali; Muthusamy, Senthilkumar K.; Gupta, R. K.; Jaiswal, Sarika; Iquebal, M. A.; Angadi, U. B.; Kumar, Neeraj; Fatma, Samar; Rai, Anil; Kumar, Dinesh

    2016-01-01

    Karnal bunt disease caused by the fungus Tilletia indica Mitra is a serious concern due to strict quarantines affecting international trade of wheat. We announce here the first draft assembly of two monosporidial lines, PSWKBGH-1 and -2, of this fungus, having approximate sizes of 37.46 and 37.21 Mbp, respectively. PMID:27634992

  17. BIODEGRADATION OF ENVIRONMENTAL POLLUTANTS BY THE WHITE ROT FUNGUS PHANEROCHAETE CHRYSOPORIUM: INVOLVEMENT OF THE LIGNIN DEGRADING SYSTEM

    EPA Science Inventory

    The white-rot fungus Phanrochaete chrysosporium has the ability to degrade a wide variety of structurally diverse organic compounds, including a number of environmentally persistent organopollutants. The unique biodegradative abilities of this fungus appears to be depend...

  18. Speciation despite globally overlapping distributions in Penicillium chrysogenum: the population genetics of Alexander Fleming’s lucky fungus

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Eighty years ago, Alexander Fleming described the antibiotic effects of a fungus that had contaminated his bacterial culture, kick starting the antimicrobial revolution. The fungus was later ascribed to a globally distributed asexual species, Penicillium chrysogenum. Recently, the species has been...

  19. Process for producing ethanol from plant biomass using the fungus Paecilomyces sp

    DOEpatents

    Wu, J.F.

    1985-08-08

    A process for producing ethanol from plant biomass is disclosed. The process includes forming a substrate from the biomass with the substrate including hydrolysates of cellulose and hemicellulose. A species of the fungus Paecilomyces which has the ability to ferment both cellobiose and xylose to ethanol is then selected and isolated. The substrate is inoculated with this fungus, and the inoculated substrate is then fermented under conditions favorable for cell viability and conversion of hydrolysates to ethanol. Finally, ethanol is recovered from the fermented substrate. 5 figs., 3 tabs.

  20. Process for producing ethanol from plant biomass using the fungus paecilomyces sp.

    DOEpatents

    Wu, Jung Fu

    1989-01-01

    A process for producing ethanol from plant biomass is disclosed. The process in cludes forming a substrate from the biomass with the substrate including hydrolysates of cellulose and hemicellulose. A species of the fungus Paecilomyces, which has the ability to ferment both cellobiose and xylose to ethanol, is then selected and isolated. The substrate is inoculated with this fungus, and the inoculated substrate is then fermented under conditions favorable for cell viability and conversion of hydrolysates to ethanol. Finally, ethanol is recovered from the fermented substrate.

  1. A virus in a fungus in a plant: Three-way symbiosis required for thermal tolerance

    USGS Publications Warehouse

    Marquez, L.M.; Redman, R.S.; Rodriguez, R.J.; Roossinck, M.J.

    2007-01-01

    A mutualistic association between a fungal endophyte and a tropical panic grass allows both organisms to grow at high soil temperatures. We characterized a virus from this fungus that is involved in the mutualistic interaction. Fungal isolates cured of the virus are unable to confer heat tolerance, but heat tolerance is restored after the virus is reintroduced. The virus-infected fungus confers heat tolerance not only to its native monocot host but also to a eudicot host, which suggests that the underlying mechanism involves pathways conserved between these two groups of plants.

  2. Laboratory evaluation of three strains of the entomopathogenic fungus Metarhizium anisopliae for controlling Dermanyssus gallinae.

    PubMed

    Tavassoli, M; Ownag, A; Pourseyed, S H; Mardani, K

    2008-06-01

    The pathogenicity of three strains of the entomopathogenic fungus Metarhizium anisopliae on different life stages of Dermanyssus gallinae was evaluated in the laboratory. All the strains tested were virulent to D. gallinae but pathogenicity varied among the strains. Strain V245 induced a higher mortality rate using different concentrations than other two strains. The estimated median lethal concentration of different strains of M. anisopliae against D. gallinae varied depending on the exposure time of D. gallinae to M. anisopliae. It was concluded that the pathogenicity of the entomopathogenic fungus M. anisopliae on different life stages of D. gallinae was concentration and time dependent.

  3. Chestnut bark tannin assays and growth of chestnut blight fungus on extracted tannin.

    PubMed

    Anagnostakis, S L

    1992-08-01

    Tannins extracted from the green bark of each of two Chinese, Japanese, and American chestnut trees were assayed in a protein-binding test. Four levels of tannins were added to a buffered, minimal growth medium, and a standard, virulent strain of the chestnut blight fungus was grown. There were only slight differences in protein binding between the extracts from different species. Fungal growth was better with tannin than without, but there was no difference between species extracts in their ability to improve fungal growth rate. There was also no inhibition of blight fungus growth by any of the tree tannins, so tannin toxicity is not the reason for Asian chestnut tree resistance.

  4. Two Cyclodepsipeptides, two Sesquiterpenoids and Other Cytotoxic Metabolites from the Filamentous Fungus Trichothecium sp. (MSX 51320)

    PubMed Central

    Sy-Cordero, Arlene A.; Graf, Tyler N.; Adcock, Audrey F.; Kroll, David J.; Shen, Qi; Swanson, Steven M.; Wani, Mansukh C.; Pearce, Cedric J.; Oberlies, Nicholas H.

    2011-01-01

    Two new cyclodepsipeptides (1 and 2), two new sesquiterpenoids (3 and 4), and the known compounds guangomide A (5), roseotoxin S, and three simple trichothecenes were isolated from the cytotoxic organic extract of a terrestrial filamentous fungus, Trichothecium sp. The structures were determined using NMR spectroscopy and mass spectrometry. Absolute configurations of the cyclodepsipeptides were established by employing chiral HPLC, while the relative configurations of 3 and 4 were determined via NOESY data. The isolation of guangomide A was of particular interest, since it was reported previously from a marine derived fungus. PMID:21978324

  5. Degradation of the plant defence hormone salicylic acid by the biotrophic fungus Ustilago maydis.

    PubMed

    Rabe, Franziska; Ajami-Rashidi, Ziba; Doehlemann, Gunther; Kahmann, Regine; Djamei, Armin

    2013-07-01

    Salicylic acid (SA) is a key plant defence hormone which plays an important role in local and systemic defence responses against biotrophic pathogens like the smut fungus Ustilago maydis. Here we identified Shy1, a cytoplasmic U. maydis salicylate hydroxylase which has orthologues in the closely related smuts Ustilago hordei and Sporisorium reilianum. shy1 is transcriptionally induced during the biotrophic stages of development but not required for virulence during seedling infection. Shy1 activity is needed for growth on plates with SA as a sole carbon source. The trigger for shy1 transcriptional induction is SA, suggesting the possibility of a SA sensing mechanism in this fungus.

  6. The research of using Co-60 γ ray to sterilize different mediums for edible fungus

    NASA Astrophysics Data System (ADS)

    Guozhu, Li; Zhenqian, Guan; Hengshou, Zhao

    1993-10-01

    The present experiment has been carried out by using different dosage of Co—60 γ ray for radiation sterilization of five kinds of cultural materials of edible fungus, The results indicated that sterilization dosage of sawdust is 22 kGy. that of cotton—seed shell and the rest are 26 kGy. We conclude that using Co-60 γ ray to sterilize the cultura 1 materials of edible fungus is a secure and saving labor and energy new method which could sterilize thoroughly.

  7. The link between rapid enigmatic amphibian decline and the globally emerging chytrid fungus.

    PubMed

    Lötters, Stefan; Kielgast, Jos; Bielby, Jon; Schmidtlein, Sebastian; Bosch, Jaime; Veith, Michael; Walker, Susan F; Fisher, Matthew C; Rödder, Dennis

    2009-09-01

    Amphibians are globally declining and approximately one-third of all species are threatened with extinction. Some of the most severe declines have occurred suddenly and for unknown reasons in apparently pristine habitats. It has been hypothesized that these "rapid enigmatic declines" are the result of a panzootic of the disease chytridiomycosis caused by globally emerging amphibian chytrid fungus. In a Species Distribution Model, we identified the potential distribution of this pathogen. Areas and species from which rapid enigmatic decline are known significantly overlap with those of highest environmental suitability to the chytrid fungus. We confirm the plausibility of a link between rapid enigmatic decline in worldwide amphibian species and epizootic chytridiomycosis.

  8. Five nitro-phenyl compounds from the South China Sea mangrove fungus.

    PubMed

    Shao, Chang-Lun; Guo, Zhi-Yong; Xia, Xue-Kui; Liu, Yan; Huang, Zhong-Jing; She, Zhi-Gang; Lin, Yong-Cheng; Zhou, Shi-Ning

    2007-01-01

    A novel nitro-phenyl glucoside (1) was isolated from mangrove endophytic fungus (fungus B60), collected from the Shenzhen mangrove Acanthus ilicifolius linn. Four related nitro-phenyl compounds (2-5) were also obtained, which were isolated for the first time as natural products. Their structures were established on the basis of NMR spectroscopic, mass spectrometric data and some chemical transformations. In the preliminary bioassay, compound 1 had a slight inhibitory effect on alpha-glucosidase with an IC(50) of 160.3 microM.

  9. In-flight decay spectroscopy of exotic light nuclei

    SciTech Connect

    Charity, R. J.

    2012-11-20

    In-flight-decay spectroscopy is discussed, including its advantages and disadvantages. In particular the use of in-flight-decay spectroscopy for the study of two-proton decay along isobaric multiplets in highlighted.

  10. Penguin diagram dominance in radiative weak decays of bottom baryons

    SciTech Connect

    Kohara, Yoji

    2005-05-01

    Radiative weak decays of antitriplet bottom baryons are studied under the assumption of penguin diagram dominance and flavor-SU(3) (or SU(2)) symmetry. Relations among decay rates of various decay modes are derived.

  11. Tau Decays at BaBar

    SciTech Connect

    Hast, Carsten; /SLAC

    2009-01-22

    Recent results of tau lepton decay studies based on luminosities between 350 fb{sup -1} and 469 fb{sup -1} collected with the BABAR detector at the PEP-II e{sup +}e{sup -} collider at the SLAC National Accelerator Laboratory are presented. The analyses reported here are Charged Current Lepton Universality and measurements of |V{sub us}| using {tau}{sup -} {yields} e{sup -}{bar {nu}}{sub e}{nu}{sub {tau}}, {mu}{sup -}{bar {nu}}{sub {mu}}{nu}{sub {tau}}, {pi}{sup -} {nu}{sub {tau}}, and K{sup -}{nu}{sub {tau}} decays, as well as searches for Second Class Currents in {tau}{sup -} {yields} {omega}{pi}{sup -}{nu}{sub {tau}} decays, studies of Lepton Flavor Violations, and a tau mass measurement and CPT-Test. If not explicitly mentioned, charge conjugate decay modes are also implied. decays, as well as searches for Second Class Currents in {tau}{sup -} {yields} {omega}{pi}{sup -}{nu}{sub {tau}} decays, studies of Lepton Flavor Violations, and a tau mass measurement and CPT-Test. If not explicitly mentioned, charge conjugate decay modes are also implied.

  12. Radiative vacancies decay of endohedral atoms

    NASA Astrophysics Data System (ADS)

    Amusia, Miron; Baltenkov, Arkadiy

    2006-05-01

    It is demonstrated that the fulleren shell affects dramatically the radiative vacancy decay of an endohedral atom A@C60. It also adds new possibilities to radiative and non-radiative decay by opening a number of new interchannel decays similar to that in ordinary atoms where initial and final state vacancies almost always belong to different subshells. We demonstrate that the radiative width of a vacancy decay due to electron transition in the atom A in A@C60 acquire an additional factor that can be expressed via the polarizability of the C60 at transition energy. In general, it can not only enhance but also totally lock the radiative decay channel. For vacancies in subvalent shells of noble gas atoms N the non-radiative decay is forbidden. For N@C60 this decay is allowed since can proceed due to transition of fulleren shell electron to the vacancy in N. Corresponding width is expressed via the C60 total photoabsorption cross-section at the transition energy.

  13. Ring current proton decay by charge exchange

    NASA Technical Reports Server (NTRS)

    Smith, P. H.; Hoffman, R. A.; Fritz, T.

    1975-01-01

    Explorer 45 measurements during the recovery phase of a moderate magnetic storm have confirmed that the charge exchange decay mechanism can account for the decay of the storm-time proton ring current. Data from the moderate magnetic storm of 24 February 1972 was selected for study since a symmetrical ring current had developed and effects due to asymmetric ring current losses could be eliminated. It was found that after the initial rapid decay of the proton flux, the equatorially mirroring protons in the energy range 5 to 30 keV decayed throughout the L-value range of 3.5 to 5.0 at the charge exchange decay rate calculated by Liemohn. After several days of decay, the proton fluxes reached a lower limit where an apparent equilibrium was maintained, between weak particle source mechanisms and the loss mechanisms, until fresh protons were injected into the ring current region during substorms. While other proton loss mechanisms may also be operating, the results indicate that charge exchange can entirely account for the storm-time proton ring current decay, and that this mechanism must be considered in all studies involving the loss of proton ring current particles.

  14. Beta decay of 187Re and cosmochronology

    NASA Astrophysics Data System (ADS)

    Ashktorab, K.; Jänecke, J. W.; Becchetti, F. D.

    1993-06-01

    Uncertainties which limit the use of the 187-187Os isobaric pair as a cosmochronometer for the age of the galaxy and the universe include those of the partial half-lives of the continuum and bound-state decays of 187Re. While the total half-life of the decay is well established, the partial half-life for the continuum decay is uncertain, and several previous measurements are not compatible with each other. A high-temperature quartz proportional counter has been used in this work to remeasure the continuum decay of 187Re by introducing a metallo-organic rhenium compound into the counting gas. The measured beta end-point energy for the continuum decay of neutral 187Re to singly ionized 187Os of 2.70+/-0.09 keV agrees with earlier results. However, the present half-life measurement of (45+/-3) Gyr agrees within the quoted uncertainties only with the earlier measurement of Payne [Ph.D. thesis, University of Glasgow, 1965 (unpublished)] and Drever (private communication). The new half-life for the continuum decay and the total half-life of (43.5+/-1.3) Gyr, as reported by Linder et al. [Nature (London) 320, 246 (1986)] yield a branching ratio for the bound-state decay into discrete atomic states of (3+/-6)%. This is in agreement with the most recent calculated theoretical branching ratio of approximately 1%.

  15. Nothing special in the specialist? Draft genome sequence of Cryomyces antarcticus, the most extremophilic fungus from Antarctica.

    PubMed

    Sterflinger, Katja; Lopandic, Ksenija; Pandey, Ram Vinay; Blasi, Barbara; Kriegner, Albert

    2014-01-01

    The draft genome of the Antarctic endemic fungus Cryomyces antarcticus is presented. This rock inhabiting, microcolonial fungus is extremely stress tolerant and it is a model organism for exobiology and studies on stress resistance in Eukaryots. Since this fungus is a specialist in the most extreme environment of the Earth, the analysis of its genome is of important value for the understanding of fungal genome evolution and stress adaptation. A comparison with Neurospora crassa as well as with other microcolonial fungi shows that the fungus has a genome size of 24 Mbp, which is the average in the fungal kingdom. Although sexual reproduction was never observed in this fungus, 34 mating genes are present with protein homologs in the classes Eurotiomycetes, Sordariomycetes and Dothideomycetes. The first analysis of the draft genome did not reveal any significant deviations of this genome from comparative species and mesophilic hyphomycetes.

  16. Nothing Special in the Specialist? Draft Genome Sequence of Cryomyces antarcticus, the Most Extremophilic Fungus from Antarctica

    PubMed Central

    Sterflinger, Katja; Lopandic, Ksenija; Pandey, Ram Vinay; Blasi, Barbara; Kriegner, Albert

    2014-01-01

    The draft genome of the Antarctic endemic fungus Cryomyces antarcticus is presented. This rock inhabiting, microcolonial fungus is extremely stress tolerant and it is a model organism for exobiology and studies on stress resistance in Eukaryots. Since this fungus is a specialist in the most extreme environment of the Earth, the analysis of its genome is of important value for the understanding of fungal genome evolution and stress adaptation. A comparison with Neurospora crassa as well as with other microcolonial fungi shows that the fungus has a genome size of 24 Mbp, which is the average in the fungal kingdom. Although sexual reproduction was never observed in this fungus, 34 mating genes are present with protein homologs in the classes Eurotiomycetes, Sordariomycetes and Dothideomycetes. The first analysis of the draft genome did not reveal any significant deviations of this genome from comparative species and mesophilic hyphomycetes. PMID:25296285

  17. Ecology of Fungus Gnats (Bradysia spp.) in Greenhouse Production Systems Associated with Disease-Interactions and Alternative Management Strategies.

    PubMed

    Cloyd, Raymond A

    2015-01-01

    Fungus gnats (Bradysia spp.) are major insect pests of greenhouse-grown horticultural crops mainly due to the direct feeding damage caused by the larvae, and the ability of larvae to transmit certain soil-borne plant pathogens. Currently, insecticides and biological control agents are being used successively to deal with fungus gnat populations in greenhouse production systems. However, these strategies may only be effective as long as greenhouse producers also implement alternative management strategies such as cultural, physical, and sanitation. This includes elimination of algae, and plant and growing medium debris; placing physical barriers onto the growing medium surface; and using materials that repel fungus gnat adults. This article describes the disease-interactions associated with fungus gnats and foliar and soil-borne diseases, and the alternative management strategies that should be considered by greenhouse producers in order to alleviate problems with fungus gnats in greenhouse production systems. PMID:26463188

  18. Ecology of Fungus Gnats (Bradysia spp.) in Greenhouse Production Systems Associated with Disease-Interactions and Alternative Management Strategies.

    PubMed

    Cloyd, Raymond A

    2015-04-09

    Fungus gnats (Bradysia spp.) are major insect pests of greenhouse-grown horticultural crops mainly due to the direct feeding damage caused by the larvae, and the ability of larvae to transmit certain soil-borne plant pathogens. Currently, insecticides and biological control agents are being used successively to deal with fungus gnat populations in greenhouse production systems. However, these strategies may only be effective as long as greenhouse producers also implement alternative management strategies such as cultural, physical, and sanitation. This includes elimination of algae, and plant and growing medium debris; placing physical barriers onto the growing medium surface; and using materials that repel fungus gnat adults. This article describes the disease-interactions associated with fungus gnats and foliar and soil-borne diseases, and the alternative management strategies that should be considered by greenhouse producers in order to alleviate problems with fungus gnats in greenhouse production systems.

  19. Ecology of Fungus Gnats (Bradysia spp.) in Greenhouse Production Systems Associated with Disease-Interactions and Alternative Management Strategies

    PubMed Central

    Cloyd, Raymond A.

    2015-01-01

    Fungus gnats (Bradysia spp.) are major insect pests of greenhouse-grown horticultural crops mainly due to the direct feeding damage caused by the larvae, and the ability of larvae to transmit certain soil-borne plant pathogens. Currently, insecticides and biological control agents are being used successively to deal with fungus gnat populations in greenhouse production systems. However, these strategies may only be effective as long as greenhouse producers also implement alternative management strategies such as cultural, physical, and sanitation. This includes elimination of algae, and plant and growing medium debris; placing physical barriers onto the growing medium surface; and using materials that repel fungus gnat adults. This article describes the disease-interactions associated with fungus gnats and foliar and soil-borne diseases, and the alternative management strategies that should be considered by greenhouse producers in order to alleviate problems with fungus gnats in greenhouse production systems. PMID:26463188

  20. Modification of Prenylated Stilbenoids in Peanut (Arachis hypogaea) Seedlings by the Same Fungi That Elicited Them: The Fungus Strikes Back.

    PubMed

    Aisyah, Siti; Gruppen, Harry; Slager, Mathijs; Helmink, Bianca; Vincken, Jean-Paul

    2015-10-28

    Aspergillus oryzae and Rhizopus oryzae were compared for inducing the production of prenylated stilbenoids in peanut seedlings. The fungus was applied at two different time points: directly after soaking (day 1) or after 2 days of germination (day 3). Aspergillus- and Rhizopus-elicited peanut seedlings accumulated an array of prenylated stilbenoids, with overlap in compounds induced, but also with compounds specific to the fungal treatment. The differences were confirmed to be due to modification of prenylated stilbenoids by the fungus itself. Each fungus appeared to deploy different strategies for modification. The content of prenylated stilbenoids modified by fungi accounted for around 8% to 49% (w/w) of total stilbenoids. The contents of modified prenylated stilbenoids were higher when the fungus was applied on day 1 instead of day 3. Altogether, type of fungus and time point of inoculation appeared to be crucial parameters for optimizing accumulation of prenylated stilbenoids in peanut seedlings.

  1. Interaction of Rhizobium sp. with Toxin-Producing Fungus in Culture Medium and in a Tropical Soil †

    PubMed Central

    Habte, Mitiku; Barrion, Melinda

    1984-01-01

    Experiments were conducted to determine the influence of a toxin-producing fungus on a rhizobial population in yeast-mannitol medium and in a tropical soil. The fungus, which was isolated from a highly weathered soil (Tropeptic Eutrustox), was identified as a Metarhizum sp. The density of rhizobial populations established in yeast-mannitol medium in the absence of the fungus was 105 times higher than that established in its presence. However, the fungus did not exert similar antagonistic influence on the rhizobial population incubated with it in the sterilized test soil. Rhizobial growth activity in yeast-mannitol medium was also insensitive to the presence of the fungus when the medium was amended with 1% (wt/vol) kaolinite or montmorillonite. The results suggest that clay minerals may be responsible for protecting rhizobia against toxin-producing fungi in soil. PMID:16346537

  2. Interaction of Rhizobium sp. with Toxin-Producing Fungus in Culture Medium and in a Tropical Soil.

    PubMed

    Habte, M; Barrion, M

    1984-05-01

    Experiments were conducted to determine the influence of a toxin-producing fungus on a rhizobial population in yeast-mannitol medium and in a tropical soil. The fungus, which was isolated from a highly weathered soil (Tropeptic Eutrustox), was identified as a Metarhizum sp. The density of rhizobial populations established in yeast-mannitol medium in the absence of the fungus was 10 times higher than that established in its presence. However, the fungus did not exert similar antagonistic influence on the rhizobial population incubated with it in the sterilized test soil. Rhizobial growth activity in yeast-mannitol medium was also insensitive to the presence of the fungus when the medium was amended with 1% (wt/vol) kaolinite or montmorillonite. The results suggest that clay minerals may be responsible for protecting rhizobia against toxin-producing fungi in soil. PMID:16346537

  3. Modification of Prenylated Stilbenoids in Peanut (Arachis hypogaea) Seedlings by the Same Fungi That Elicited Them: The Fungus Strikes Back.

    PubMed

    Aisyah, Siti; Gruppen, Harry; Slager, Mathijs; Helmink, Bianca; Vincken, Jean-Paul

    2015-10-28

    Aspergillus oryzae and Rhizopus oryzae were compared for inducing the production of prenylated stilbenoids in peanut seedlings. The fungus was applied at two different time points: directly after soaking (day 1) or after 2 days of germination (day 3). Aspergillus- and Rhizopus-elicited peanut seedlings accumulated an array of prenylated stilbenoids, with overlap in compounds induced, but also with compounds specific to the fungal treatment. The differences were confirmed to be due to modification of prenylated stilbenoids by the fungus itself. Each fungus appeared to deploy different strategies for modification. The content of prenylated stilbenoids modified by fungi accounted for around 8% to 49% (w/w) of total stilbenoids. The contents of modified prenylated stilbenoids were higher when the fungus was applied on day 1 instead of day 3. Altogether, type of fungus and time point of inoculation appeared to be crucial parameters for optimizing accumulation of prenylated stilbenoids in peanut seedlings. PMID:26458982

  4. Particle physics: CP violation in hyperon decays

    SciTech Connect

    Longo, Michael J.

    2000-10-31

    The primary research activities under this grant were in E871 (HyperCP) at Fermilab, a search for CP violation in hyperon decays which completed data taking in January, 2000. HyperCP is an experiment designed to perform a sensitive search for direct CP violation in the decays of cascade ({Xi}) and {Lambda} hyperons by looking for an asymmetry between particle and antiparticle decay parameters. The experiment is expected to achieve a sensitivity {approx}10{sup -4} in the decay parameters. Standard model predictions for this CP-violating asymmetry range from 0.3 to 5 x 10{sup -4}. A difference between the decay parameters for particle and antiparticle is direct evidence that CP symmetry is violated. A non-zero asymmetry would be the first evidence for CP violation outside of the K{sup o} system. Recent results from KTeV indicate a direct CP violation in K{sup o} decays, which suggests that CP violation will appear in other decays. In addition, we will look at a number of rare hyperon decays involving muons. These probe important new physics topics such as Majorana neutrinos and lepton number violating processes. The latter are of great current interest because new evidence for neutrino oscillations indicate lepton flavor violation does occur. Our data will lead to an improvement in the limits on branching ratios for these processes typically by three to four orders-of-magnitude. The muon detector construction and data resulting from it have been the responsibility of the Michigan group. We are now leading the analysis of the rare muon-related decay modes, and were responsible for the muon system and beam monitor upgrades for the 1999 run.

  5. Suppressed $B_s$ decays at CDF

    SciTech Connect

    Dorigo, Mirco

    2011-05-01

    We review three recent results of the CDF collaboration on B{sub s}{sup 0} suppressed decays: the first search for CP-violation in the B{sub s}{sup 0} {yields} {phi}{phi} decay, where two CP-violating asymmetries expected to be zero in the Standard Model are measured, and the observation and the branching ratio measurements of B{sub s}{sup 0} {yields} J/{Psi} f{sub 0}(980) and B{sub s}{sup 0} {yields} J/{Psi} K{sup (*)} decays.

  6. B to tau Leptonic and Semileptonic Decays

    SciTech Connect

    Barrett, M.; /Brunel U.

    2011-11-17

    Decays of B mesons to states involving {tau} leptons can be used as a tool to search for the effects of new physics, such as those involving a charged Higgs boson. The experimental status of the decays B {yields} {tau}{nu} and B {yields} D{sup (*)}{tau}{nu} is discussed, together with limits on new physics effects from current results. Leptonic and semileptonic decays of B mesons into states involving {tau} leptons remain experimentally challenging, but can prove a useful tool for constraining Standard Model parameters, and also offer to constrain the effects of any new physics that may exist including the presence of a charged Higgs boson.

  7. Trap-assisted decay spectroscopy with ISOLTRAP

    NASA Astrophysics Data System (ADS)

    Kowalska, M.; Naimi, S.; Agramunt, J.; Algora, A.; Beck, D.; Blank, B.; Blaum, K.; Böhm, Ch.; Borgmann, Ch.; Breitenfeldt, M.; Fraile, L. M.; George, S.; Herfurth, F.; Herlert, A.; Kreim, S.; Lunney, D.; Minaya-Ramirez, E.; Neidherr, D.; Rosenbusch, M.; Rubio, B.; Schweikhard, L.; Stanja, J.; Zuber, K.

    2012-10-01

    Penning traps are excellent high-precision mass spectrometers for radionuclides. The high-resolving power used for cleaning isobaric and even isomeric contaminants can be exploited to improve decay-spectroscopy studies by delivering purified samples. An apparatus allowing trap-assisted decay spectroscopy has been coupled to the ISOLTRAP mass spectrometer at ISOLDE/CERN. The results from studies with stable and radioactive ions show that the setup can be used to perform decay studies on purified short-lived nuclides and to assist mass measurements.

  8. Spectroscopy of element 115 decay chains.

    PubMed

    Rudolph, D; Forsberg, U; Golubev, P; Sarmiento, L G; Yakushev, A; Andersson, L-L; Di Nitto, A; Düllmann, Ch E; Gates, J M; Gregorich, K E; Gross, C J; Heßberger, F P; Herzberg, R-D; Khuyagbaatar, J; Kratz, J V; Rykaczewski, K; Schädel, M; Åberg, S; Ackermann, D; Block, M; Brand, H; Carlsson, B G; Cox, D; Derkx, X; Eberhardt, K; Even, J; Fahlander, C; Gerl, J; Jäger, E; Kindler, B; Krier, J; Kojouharov, I; Kurz, N; Lommel, B; Mistry, A; Mokry, C; Nitsche, H; Omtvedt, J P; Papadakis, P; Ragnarsson, I; Runke, J; Schaffner, H; Schausten, B; Thörle-Pospiech, P; Torres, T; Traut, T; Trautmann, N; Türler, A; Ward, A; Ward, D E; Wiehl, N

    2013-09-13

    A high-resolution α, x-ray, and γ-ray coincidence spectroscopy experiment was conducted at the GSI Helmholtzzentrum für Schwerionenforschung. Thirty correlated α-decay chains were detected following the fusion-evaporation reaction 48Ca + 243Am. The observations are consistent with previous assignments of similar decay chains to originate from element Z=115. For the first time, precise spectroscopy allows the derivation of excitation schemes of isotopes along the decay chains starting with elements Z>112. Comprehensive Monte Carlo simulations accompany the data analysis. Nuclear structure models provide a first level interpretation.

  9. Electrostatic decay in a weakly magnetized plasma.

    PubMed

    Layden, A; Cairns, Iver H; Li, B; Robinson, P A

    2013-05-01

    The kinematics of the electrostatic (ES) decay of a Langmuir wave into a Langmuir wave and an ion sound wave are generalized to a weakly magnetized plasma. Unlike the unmagnetized case, ES decay in a magnetized plasma is always kinematically permitted and can produce daughter Langmuir waves with very small wave numbers, which we demonstrate by quasilinear simulations. The simulations further show that ES decay in magnetized plasmas is consistent with STEREO spacecraft observations of transversely polarized Langmuir waves in the solar wind. PMID:23683206

  10. Charmless and Penguin Decays at CDF

    SciTech Connect

    Dorigo, Mirco; Collaboration, for the CDF

    2010-12-01

    Penguin transitions play a key role in the search of New Physics hints in the heavy flavor sector. During the last decade CDF has been exploring this opportunity with a rich study of two-body charmless decays of neutral B mesons into charged final-state particles. After briefly introducing the aspects of this physics peculiar to the hadron collision environment, I report on two interesting results: the first polarization measurement of the B{sub s}{sup 0} {yields} {phi}{phi} decay and the update of the B{sub (s)}{sup 0} {yields} h{sup +}h{prime}{sup -} decays analysis.

  11. Radiative Penguin Decays at the B Factories

    SciTech Connect

    Koneke, Karsten; /MIT, LNS

    2007-11-16

    In this article, I review the most recent results in radiative penguin decays from the B factories Belle and BABAR. Most notably, I will talk about the recent new observations in the decays B {yields} ({rho}/{omega}) {gamma}, a new analysis technique in b {yields} s{gamma}, and first measurements of radiative penguin decays in the B{sup 0}{sub s} meson system. Finally, I will summarize the current status and future prospects of radiative penguin B physics at the B factories.

  12. β -decay study of 94Kr

    NASA Astrophysics Data System (ADS)

    Miernik, K.; Rykaczewski, K. P.; Grzywacz, R.; Gross, C. J.; Madurga, M.; Miller, D.; Stracener, D. W.; Batchelder, J. C.; Brewer, N. T.; Cartegni, L.; Fijałkowska, A.; Karny, M.; Korgul, A.; Królas, W.; Mazzocchi, C.; Mendez, A. J., II; Padgett, S. W.; Paulauskas, S. V.; Winger, J. A.; Wolińska-Cichocka, M.; Zganjar, E. F.

    2016-08-01

    β decay of neutron-rich nuclide 94Kr was reinvestigated by means of a high resolution on-line mass separator and β -γ spectroscopy. In total 22 γ -ray transitions were assigned to the decay of 94Kr, and a new isomeric state was identified. The new information allows us to build detailed levels systematics in a chain of odd-odd rubidium isotopes and draw conclusions on nuclear structure for some of the observed states. The discussed level structure affects the evolution of β -decay half-lives for neutron-rich selenium, krypton, and strontium isotopes.

  13. Decay time of type 3 solar bursts

    NASA Technical Reports Server (NTRS)

    Alvarez, H.; Haddock, F. T.

    1973-01-01

    Type 3 solar bursts observed by OGO-5, below 600 kHz, were analyzed. Decay times were measured, and collisional decay times were computed for distances out to 1 AU. By fitting power functions to the computed and observed decay times, and using local plasma hypothesis, it was found that the ratio rho of computed observed values varies with heliocentric radial distance according to a power function rho = 3r to the 0.7th power, assuming fundamental emission, and rho = 2r to the 0.7th power, assuming second harmonic emission.

  14. Rare kaon, muon, and pion decay

    SciTech Connect

    Littenberg, L.

    1998-12-01

    The author discusses the status of and prospects for the study of rare decays of kaons, muons, and pions. Studies of rare kaon decays are entering an interesting new phase wherein they can deliver important short-distance information. It should be possible to construct an alternative unitarity triangle to that determined in the B sector, and thus perform a critical check of the Standard Model by comparing the two. Rare muon decays are beginning to constrain supersymmetric models in a significant way, and future experiments should reach sensitivities which this kind of model must show effects, or become far less appealing.

  15. Spectroscopy of element 115 decay chains.

    PubMed

    Rudolph, D; Forsberg, U; Golubev, P; Sarmiento, L G; Yakushev, A; Andersson, L-L; Di Nitto, A; Düllmann, Ch E; Gates, J M; Gregorich, K E; Gross, C J; Heßberger, F P; Herzberg, R-D; Khuyagbaatar, J; Kratz, J V; Rykaczewski, K; Schädel, M; Åberg, S; Ackermann, D; Block, M; Brand, H; Carlsson, B G; Cox, D; Derkx, X; Eberhardt, K; Even, J; Fahlander, C; Gerl, J; Jäger, E; Kindler, B; Krier, J; Kojouharov, I; Kurz, N; Lommel, B; Mistry, A; Mokry, C; Nitsche, H; Omtvedt, J P; Papadakis, P; Ragnarsson, I; Runke, J; Schaffner, H; Schausten, B; Thörle-Pospiech, P; Torres, T; Traut, T; Trautmann, N; Türler, A; Ward, A; Ward, D E; Wiehl, N

    2013-09-13

    A high-resolution α, x-ray, and γ-ray coincidence spectroscopy experiment was conducted at the GSI Helmholtzzentrum für Schwerionenforschung. Thirty correlated α-decay chains were detected following the fusion-evaporation reaction 48Ca + 243Am. The observations are consistent with previous assignments of similar decay chains to originate from element Z=115. For the first time, precise spectroscopy allows the derivation of excitation schemes of isotopes along the decay chains starting with elements Z>112. Comprehensive Monte Carlo simulations accompany the data analysis. Nuclear structure models provide a first level interpretation. PMID:24074079

  16. Photoproduction and Decay of Light Mesons in CLAS

    SciTech Connect

    Amaryan, Moskov Jamalovich

    2013-08-01

    We present preliminary experimental results on photoproduction and decay of light mesons measured with CLAS setup at JLAB . This include Dalitz decay of pseudoscalar and vector mesons, radiative decay of pseudoscalar mesons as well hadronic decays of pseudoscalar and vector mesons. The collected high statistics in some of decay channels exceeds the world data by an order of magnitude and some other decay modes are observed for the first time. It is shown how the CLAS data will improve the world data on transition form factors of light mesons, Dalitz plot analyses, branching ratios of rare decay modes and other fundamental properties potentially accessible through the light meson decays.

  17. Three-body decay of many-body resonances

    SciTech Connect

    Jensen, A.S.; Fedorov, D.V.; Fynbo, H.O.U.; Garrido, E.

    2005-10-14

    We use the hyperspherical coordinates to describe decay of many-body resonances. Direct and sequential decay are described by different paths in the distances between the particles. We generalize the WKB expression for the {alpha}-decay width to decay of three charged particles. Decay mechanisms and resonance structures are computed in coordinate space. The energy distributions of the particles after decay are discussed. Moderate s-wave scattering lengths prefer decay via corresponding virtual state possibly leaving unique fingerprints of this reminiscence of the Efimov effect in the decay of excited states. Numerical illustrations are resonances in 6He, 12C, 17Ne.

  18. Curvaton scenarios with inflaton decays into curvatons

    NASA Astrophysics Data System (ADS)

    Byrnes, Christian T.; Cortês, Marina; Liddle, Andrew R.

    2016-09-01

    We consider the possible decay of the inflaton into curvaton particles during reheating and analyze its effect on curvaton scenarios. Typical decay curvatons are initially relativistic then become nonrelativistic, changing the background history of the Universe. We show that this change to the background is the only way in which observational predictions of the scenario are modified. Moreover, once the required amplitude of perturbations is fixed by observation there are no signatures of such decays in other cosmological observables. The decay curvatons can prevent the Universe from becoming dominated by the curvaton condensate, making it impossible to match observations in parts of parameter space. This constrains the branching ratio of the inflaton to curvaton to be less than of order 0.1 typically. If the branching ratio is below about 10-4 it has negligible impact on the model parameter space and can be ignored.

  19. B Decays with tau at Belle

    SciTech Connect

    Hara, Koji

    2010-02-10

    B decays with {tau} are sensitive to a charged Higgs predicted by extensions of the Standard Model such as the Two Higgs Doublet Models and the Minimal Supersymmetric Standard Model. We report measurements of the decays B+->{tau}{sup +}{nu}{sub {tau}}, B->D*{tau}{nu}{sub {tau}} and B->D{tau}{nu}{sub {tau}} using a large data sample of BB-bar pairs collected with the Belle detector at the KEKB asymmetric-energy e{sup +}e{sup -} collider. We observe a signal of B{sup 0}->D*{sup -}{tau}{sup +}{nu}{sub {tau}} decay with a significance of 5.2 {sigma} and find evidences of B{sup +}->{tau}{sup +}{nu}{sub {tau}} and D-bar{sup 0}{tau}{sup +}{nu}{sub {tau}} decays with significances more than 3 {sigma}.

  20. 7 CFR 51.898 - Decay.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE REGULATIONS AND STANDARDS UNDER THE AGRICULTURAL MARKETING ACT OF 1946.... Slight surface development of green mold (Cladosporium) shall not be considered decay....

  1. Rare charm and B decays at CDF

    SciTech Connect

    Julia Thom

    2003-12-15

    We present results on rare charm and B decays using 65pb{sup -1} of data taken with the CDF detector in Run II. Three results are discussed, a measurement of the relative branching ratios {Lambda}(D{sup 0} {yields} K{sup +}K{sup -})/{Lambda}(D{sup 0} {yields} K{pi}) and {Lambda}(D{sup 0} {yields} {pi}{sup +}{pi}{sup -})/{Lambda}(D{sup 0} {yields} K{pi}) and the direct CP-violating decay rate asymmetry, and a limit on the branching ratio of the FCNC decay D{sup 0} {yields} {mu}{sup +}{mu}{sup -}. We also discuss the prospects for the search for B{sub s}{sup 0} {yields} {mu}{sup +}{mu}{sup -} decays.

  2. The decay of highly excited open strings

    NASA Technical Reports Server (NTRS)

    Mitchell, D.; Turok, N.; Wilkinson, R.; Jetzer, P.

    1988-01-01

    The decay rates of leading edge Regge trajectory states are calculated for very high level number in open bosonic string theories, ignoring tachyon final states. The optical theorem simplifies the analysis while enabling identification of the different mass level decay channels. The main result is that (in four dimensions) the greatest single channel is the emission of a single photon and a state of the next mass level down. A simple asymptotic formula for arbitrarily high level number is given for this process. Also calculated is the total decay rate exactly up to N=100. It shows little variation over this range but appears to decrease for larger N. The formalism is checked in examples and the decay rate of the first excited level calculated for open superstring theories. The calculation may also have implications for high spin meson resonances.

  3. LHC prospects for minimal decaying dark matter

    SciTech Connect

    Arcadi, Giorgio; Covi, Laura; Dradi, Federico E-mail: laura.covi@theorie.physik.uni-goettingen.de

    2014-10-01

    We study the possible signals at LHC of the minimal models of decaying dark matter. Those models are characterized by the fact that DM interacts with SM particles through renormalizable coupling with an additional heavier charged state. Such interaction allows to produce a substantial abundance of DM in the early Universe via the decay of the charged heavy state, either in- or out-of-equilibrium. Moreover additional couplings of the charged particle open up decay channels for the DM, which can nevertheless be sufficiently long-lived to be a good DM candidate and within reach of future Indirect Detection observations. We compare the cosmologically favored parameter regions to the LHC discovery reach and discuss the possibility of simultaneous detection of DM decay in Indirect Detection.

  4. Decay of Turbulence at High Reynolds Numbers

    NASA Astrophysics Data System (ADS)

    Sinhuber, Michael; Bodenschatz, Eberhard; Bewley, Gregory P.

    2015-01-01

    Turbulent motions in a fluid decay at a certain rate once stirring has stopped. The role of the most basic parameter in fluid mechanics, the Reynolds number, in setting the decay rate is not generally known. This Letter concerns the high-Reynolds-number limit of the process. In a classical grid-turbulence wind-tunnel experiment that both reaches higher Reynolds numbers than ever before and covers a wide range of them (1 04decay rate with the unprecedented precision of about 2%. Here U is the mean speed of the flow, M is the forcing scale, and ν is the kinematic viscosity of the fluid. We observe that the decay rate is Reynolds-number independent, which contradicts some models and supports others.

  5. Review of modern double beta decay experiments

    SciTech Connect

    Barabash, A. S.

    2015-10-28

    The review of modern experiments on search and studying of double beta decay processes is done. Results of the most sensitive current experiments are discussed. The main attention is paid to EXO-200, KamLAND-Zen, GERDA-I and CUORE-0 experiments. Modern values of T{sub 1/2}(2ν) and best present limits on neutrinoless double beta decay and double beta decay with Majoron emission are presented. Conservative limits on effective mass of a Majorana neutrino (〈m{sub ν}〉 < 0.46 eV) and a coupling constant of Majoron to neutrino (〈g{sub ee}〉 < 1.3 · 10{sup −5}) are obtained. Prospects of search for neutrinoless double beta decay in new experiments with sensitivity to 〈m{sub ν}〉 at the level of ∼ 0.01-0.1 eV are discussed.

  6. Decay heat studies for nuclear energy

    NASA Astrophysics Data System (ADS)

    Algora, A.; Jordan, D.; Taín, J. L.; Rubio, B.; Agramunt, J.; Caballero, L.; Nácher, E.; Perez-Cerdan, A. B.; Molina, F.; Estevez, E.; Valencia, E.; Krasznahorkay, A.; Hunyadi, M. D.; Gulyás, J.; Vitéz, A.; Csatlós, M.; Csige, L.; Eronen, T.; Rissanen, J.; Saastamoinen, A.; Moore, I. D.; Penttilä, H.; Kolhinen, V. S.; Burkard, K.; Hüller, W.; Batist, L.; Gelletly, W.; Nichols, A. L.; Yoshida, T.; Sonzogni, A. A.; Peräjärvi, K.

    2014-01-01

    The energy associated with the decay of fission products plays an important role in the estimation of the amount of heat released by nuclear fuel in reactors. In this article we present results of the study of the beta decay of some refractory isotopes that were considered important contributors to the decay heat in reactors. The measurements were performed at the IGISOL facility of the University of Jyväskylä, Finland. In these studies we have combined for the first time a Penning trap (JYFLTRAP), which was used as a high resolution isobaric separator, with a total absorption spectrometer. The results of the measurements as well as their consequences for decay heat summation calculations are discussed.

  7. Electrical Analogs of Atomic Radiative Decay Processes

    ERIC Educational Resources Information Center

    Fontana, Peter R.; Srivastava, Rajendra P.

    1977-01-01

    Analyzes simple electrical circuits, showing that for high frequencies they have frequency and time responses identical to the spontaneous radiative decay of atoms. Compares a two-circuit electrical system with a two-level atom. (MLH)

  8. Radiative And Electroweak Penguin Decays of B

    SciTech Connect

    Richman, Jeffrey D.; /UC, Santa Barbara

    2007-11-09

    Radiative and electroweak penguin decays of B mesons are flavor-changing-neutral-current processes that provide powerful ways to test the Standard Model at the one-loop level, to search for the effects of new physics, and to extract Standard Model parameters such as CKM matrix elements and quark masses. The large data samples obtained by the B-factory experiments BaBar and Belle, together with an intensive theoretical effort, have led to significant progress towards understanding these rare decays. Recent experimental results include the measurements of the b {yields} d{gamma} decays B {yields} {rho}({omega}){gamma}, the observation of B {yields} K(*){ell}{sup +}{ell}{sup -} decays (together with studies of the associated kinematic distributions), and improved measurements of the inclusive B {yields} Xs{gamma} rate and photon energy spectrum.

  9. Rare Decays at the LHCb Experiment

    NASA Astrophysics Data System (ADS)

    Pescatore, L.

    2015-06-01

    Rare decays of beauty and charm hadrons offer a rich playground to make precise tests of the Standard Model and look for New Physics at the level of quantum corrections. A review of recent LHCb results will be presented.

  10. Evaluation of 235U decay data.

    PubMed

    Xiaolong, Huang; Baosong, Wang

    2009-09-01

    Evaluation of the complete decay scheme and data for (235)U including new measurements are presented in this report; literature data available up to June 2008 are included. The half-life is determined to be (7.04+/-0.01) x 10(8) yr. All known measured gamma-ray absolute intensities have been examined; the gamma-ray emission probability of the reference gamma-ray line of 185.72 keV is recommended to be 57.0+/-0.3%. The calculated internal conversion coefficients and their uncertainties have been used to obtain the complete decay intensity balance. The other decay characteristics are calculated using the ENSDF analysis program. Finally the new decay scheme for (235)U is presented.

  11. Searching for $Z'$ bosons decaying to gluons

    SciTech Connect

    Alwall, Johan; Khader, Mazin; Rajaraman, Arvind; Whiteson, Daniel; Yen, Michael; /UC, Irvine

    2012-02-01

    The production and decay of a new heavy vector boson, a chromophilic Z{prime} vector boson, is described. The chromophilic Z{prime} couples only to two gluons, but its two-body decays are absent, leading to a dominant decay mode of Z{prime} {yields} q{bar q}g. The unusual nature of the interaction predicts a cross-section which grows with m{sub Z{prime}} for a fixed coupling and an accompanying gluon with a coupling that rises with its energy. We study the t{bar t}g decay mode, proposing distinct reconstruction techniques for the observation of an excess and for the measurement of m{sub Z{prime}}. We estimate the sensitivity of current experimental datasets.

  12. Cosmic strings and baryon decay catalysis

    NASA Technical Reports Server (NTRS)

    Gregory, Ruth; Perkins, W. B.; Davis, A.-C.; Brandenberger, R. H.

    1989-01-01

    Cosmic strings, like monopoles, can catalyze proton decay. For integer charged fermions, the cross section for catalysis is not amplified, unlike in the case of monopoles. The catalysis processes are reviewed both in the free quark and skyrmion pictures and the implications for baryogenesis are discussed. A computation of the cross section for monopole catalyzed skyrmion decay is presented using classical physics. Also discussed are some effects which can screen catalysis processes.

  13. Cosmic string catalysis of skyrmion decay

    NASA Technical Reports Server (NTRS)

    Gregory, Ruth; Davis, Anne-Christine; Brandenberger, Robert

    1988-01-01

    The Callan-Witten picture is developed for monopole catalyzed skyrmion decay in order to analyze the corresponding cosmic string scenario. It is discovered that cosmic strings (both ordinary and superconducting) can catalyze proton decay, but that this catalysis only occurs on the scale of the core of the string. In order to do this we have to develop a vortex model for the superconducting string. An argument is also given for the difference in the enhancement factors for monopoles and strings.

  14. Rare top quark decays in extended models

    SciTech Connect

    Gaitan, R.; Miranda, O. G.; Cabral-Rosetti, L. G.

    2006-09-25

    Flavor changing neutral currents (FCNC) decays t {yields} H0 + c, t {yields} Z + c, and H0 {yields} t + c-bar are discussed in the context of Alternative Left-Right symmetric Models (ALRM) with extra isosinglet heavy fermions where FCNC decays may take place at tree-level and are only suppressed by the mixing between ordinary top and charm quarks, which is poorly constraint by current experimental values. The non-manifest case is also briefly discussed.

  15. Vacuum decay in a soluble model

    SciTech Connect

    Ferraz de Camargo F, A.; Shellard, R.C.; Marques, G.C.

    1984-03-15

    We study a field-theoretical model where the decay rate of the false vacuum can be computed up to the first quantum corrections in both the high-temperature and zero-temperature limits. We find that the dependence of the decay rate on the height and width of the potential barrier does not follow the same simple area rule as in the quantum-mechanical case. Furthermore, its behavior is strongly model dependent.

  16. Single-Majoron emission in. mu. decay

    SciTech Connect

    Santamaria, A.; Pich, A.; Bernabeu, J.

    1985-11-01

    The ..mu -->..etheta and ..mu -->..erho/sub L/ decays, where theta is a Nambu-Goldstone boson associated with the B-L breakdown and rho/sub L/ is a very light neutral Higgs boson, are evaluated in the framework of the triplet model of Gelmini and Roncadelli. It is shown that the widths of these decay modes may be comparable to the ..mu -->..e..gamma.. one.

  17. First forbidden beta decay in light nuclei

    SciTech Connect

    Millener, D.J.; Warburton, E.K.

    1984-01-01

    Beta decay matrix elements for the operators sigma dot del and sigma dot r are calculated for eight J/sup +/ ..-->.. J/sup -/ or J/sup -/ ..-->.. J/sup +/ beta transitions. Results using harmonic oscillator wave functions differ markedly from those using more realistic Woods-Saxon wave functions. A substantial contribution to the sigma dot del matrix elements from pion exchange currents is required to reproduce the experimental beta decay rates. 15 references.

  18. Exact relativistic {beta} decay endpoint spectrum

    SciTech Connect

    Masood, S. S.; Nasri, S.; Schechter, J.; Tortola, M. A.; Valle, J. W. F.

    2007-10-15

    The exact relativistic form for the {beta} decay endpoint spectrum is derived and presented in a simple factorized form. We show that our exact formula can be well approximated to yield the endpoint form used in the fit method of the KATRIN Collaboration. We also discuss the three-neutrino case and how information from neutrino oscillation experiments may be useful in analyzing future {beta} decay endpoint experiments.

  19. Decay properties of double heavy baryons

    SciTech Connect

    Faessler, Amand; Gutsche, Thomas; Lyubovitskij, Valery; Ivanov, Mikhail A.; Koerner, Juergen G.

    2010-08-05

    We study the semileptonic decays of double heavy baryons using a manifestly Lorentz covariant constituent three-quark model. We present complete results on transition form factors between double-heavy baryons for finite values of the heavy quark/baryon masses and in the heavy quark symmetry limit which is valid at and close to zero recoil. Decay rates are calculated and compared to each other in the full theory, keeping masses finite, and also in the heavy quark limit.

  20. Leptonic Decays of Charged Pseudoscalar Mesons - 2015

    SciTech Connect

    Rosner, Jonathan L.; Stone, Sheldon; Van de Water, Ruth S.

    2015-09-07

    We review the physics of purely leptonic decays of $\\pi^\\pm$, $K^\\pm$, $D^{\\pm}$, $D_s^\\pm$, and $B^\\pm$ pseudoscalar mesons. The measured decay rates are related to the product of the relevant weak-interaction-based CKM matrix element of the constituent quarks and a strong interaction parameter related to the overlap of the quark and antiquark wave-functions in the meson, called the decay constant $f_P$. The leptonic decay constants for $\\pi^\\pm$, $K^\\pm$, $D^{\\pm}$, $D_s^\\pm$, and $B^\\pm$ mesons can be obtained with controlled theoretical uncertainties and high precision from {\\it ab initio} lattice-QCD simulations. The combination of experimental leptonic decay-rate measurements and theoretical decay-constant calculations enables the determination of several elements of the CKM matrix within the standard model. These determinations are competitive with those obtained from semileptonic decays, and also complementary because they are sensitive to different quark flavor-changing currents. They can also be used to test the unitarity of the first and second rows of the CKM matrix. Conversely, taking the CKM elements predicted by unitarity, one can infer "experimental" values for $f_P$ that can be compared with theory. These provide tests of lattice-QCD methods, provided new-physics contributions to leptonic decays are negligible at the current level of precision. This review is the basis of the article in the Particle Data Group's 2016 edition, updating the versions in Refs. [1-3].

  1. The weak decay of helium hypernuclei

    SciTech Connect

    Athanas, M.J.

    1992-08-01

    A {Lambda} hyperon replaces a neutron in a nucleus to form a hypernucleus via the {sup A}X(K{sup {minus}}, {pi}{sup {minus}}) {sub {Lambda}}{sup A}X reaction at 750 MeV/c (Brookhaven Experiment 788). The free {Lambda} decay rates {Gamma}({Lambda} {yields} p{pi}{sup {minus}}) and {Gamma}({Lambda} {yields} n{pi}{sup 0}) are diminished due to Pauli blocking; but a non-mesonic decay mode, nucleon stimulated decay N{Lambda} {yields} Nn, is present and is detected via the energetic decay nucleon(s) ({approx} 400MeV/c). Measurements of the various hypernuclear decay rates {Gamma}({Lambda} {yields} p{pi}{sup {minus}}), {Gamma}({Lambda} {yields} n{pi}{sup 0}) and {Gamma}({Lambda}n {yields} nn) provides insight into the strong modification of the weak interaction such as the baryon-baryon {Delta}I ={1/2} rule. The hypernuclear state is isolated by momentum analysis of (K{sup {minus}}, {pi}{sup {minus}}) target reaction. Out-of-beam large volume scintillation detectors and tracking chambers axe used to make particle identification of the hypernuclear decay products by time-of-flight, dE/dx, and range. The kinetic energy of the decay neutrons are measured by time of flight using the large volume 100 element neutron detector system. The hypernuclear lifetime is directly measured using precision scintillator counters and tracking chambers. Measurements of the various decay rates as well as the total lifetime are discussed for {sub {Lambda}}{sup 4}He.

  2. Rare meson decays into very light neutralinos

    SciTech Connect

    O'Leary, Ben

    2010-02-10

    Results are presented for the two-body decays of mesons into light neutralinos and from the first complete calculation of the loop-induced decays of kaons to pions plus light neutralinos and of B mesons to kaons plus light neutralinos. The branching ratios are shown to be strongly suppressed within the MSSM with minimal flavor violation, and no bounds on the neutralino mass can be inferred from experimental data, i.e. a massless neutralino is allowed.

  3. Effectiveness of Defatted Mustard Meals Used to Control Fungus Gnats: 2000-2002

    SciTech Connect

    McCaffrey, J. P.; Morra, M. J.

    2005-07-01

    Our objective is to develop a pesticidal product from mustard meals that can be used to control insect pests. We have focused our efforts on fungus gnats. This report details our current progress in developing a pesticidal product that can be used to control this plant pest.

  4. Cellular development associated with induced secondary metabolism in the filamentous fungus Fusarium graminearum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Several species of the filamentous fungus Fusarium colonize plants and produce toxic small molecules that contaminate agricultural products, rendering them unsuitable for consumption. Among the most destructive of these species is F. graminearum, which causes disease in wheat and barley and often in...

  5. Strategies for durable resistance to the grapevine powdery mildew fungus, Erysiphe necator

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Nearly all cultivars of Vitis vinifera are highly susceptible to the grapevine powdery mildew fungus, Erysiphe necator. Grape breeders around the world are working to introgress resistance from wild Vitis. Of the widely-used introgressions, most involve dominant, race-specific resistance phenotype...

  6. Amphibians acquire resistance to live and dead fungus overcoming fungal immunosuppression.

    PubMed

    McMahon, Taegan A; Sears, Brittany F; Venesky, Matthew D; Bessler, Scott M; Brown, Jenise M; Deutsch, Kaitlin; Halstead, Neal T; Lentz, Garrett; Tenouri, Nadia; Young, Suzanne; Civitello, David J; Ortega, Nicole; Fites, J Scott; Reinert, Laura K; Rollins-Smith, Louise A; Raffel, Thomas R; Rohr, Jason R

    2014-07-10

    Emerging fungal pathogens pose a greater threat to biodiversity than any other parasitic group, causing declines of many taxa, including bats, corals, bees, snakes and amphibians. Currently, there is little evidence that wild animals can acquire resistance to these pathogens. Batrachochytrium dendrobatidis is a pathogenic fungus implicated in the recent global decline of amphibians. Here we demonstrate that three species of amphibians can acquire behavioural or immunological resistance to B. dendrobatidis. Frogs learned to avoid the fungus after just one B. dendrobatidis exposure and temperature-induced clearance. In subsequent experiments in which B. dendrobatidis avoidance was prevented, the number of previous exposures was a negative predictor of B. dendrobatidis burden on frogs and B. dendrobatidis-induced mortality, and was a positive predictor of lymphocyte abundance and proliferation. These results suggest that amphibians can acquire immunity to B. dendrobatidis that overcomes pathogen-induced immunosuppression and increases their survival. Importantly, exposure to dead fungus induced a similar magnitude of acquired resistance as exposure to live fungus. Exposure of frogs to B. dendrobatidis antigens might offer a practical way to protect pathogen-naive amphibians and facilitate the reintroduction of amphibians to locations in the wild where B. dendrobatidis persists. Moreover, given the conserved nature of vertebrate immune responses to fungi and the fact that many animals are capable of learning to avoid natural enemies, these results offer hope that other wild animal taxa threatened by invasive fungi might be rescued by management approaches based on herd immunity.

  7. Treatment of a textile effluent from dyeing with cochineal extracts using Trametes versicolor fungus.

    PubMed

    Arroyo-Figueroa, Gabriela; Ruiz-Aguilar, Graciela M L; López-Martínez, Leticia; González-Sánchez, Guillermo; Cuevas-Rodríguez, Germán; Rodríguez-Vázquez, Refugio

    2011-01-01

    Trametes versicolor (Tv) fungus can degrade synthetic dyes that contain azo groups, anthraquinone, triphenylmethane polymers, and heterocyclic groups. However, no references have been found related to the degradation of natural dyes, such as the carminic acid that is contained in the cochineal extract. Experiments to determine the decolorization of the effluent used in the cotton dyeing process with cochineal extract by means of Tv fungus were done. Treatments to determine decolorization in the presence or absence of Kirk's medium, glucose, and fungus, with an addition of 50% (v v-1) of nonsterilized effluent were performed. Physicochemical characterization was performed at the start and end of the treatment. Degradation kinetics were determined. A direct relationship was found between the dry weight of fungi, pH, and the decolorization system, with higher decolorization at lower pH levels (pH ~4.3). High decolorization (81% ± 0.09; 88% ± 0.17; and 99% ± 0.04) for three of the eight treatments (Kirk's medium without glucose, Kirk's medium with glucose, and without medium with glucose, respectively) was found. Toxicity tests determined an increase in the initial effluent toxicity (7.33 TU) compared with the final treatment (47.73 TU) in a period of 11 days. For this system, a degradation sequence of the carminic acid structure present in the effluent by the Tv fungus is suggested, in which it is seen that metabolites still containing aromatic structures are generated. PMID:21552764

  8. Dissolved oxygen levels affect dimorphic growth by the entomopathogenic fungus Isaria fumosorosea

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The entomopathogenic fungus Isaria fumosorosea is capable of dimorphic growth (hyphal or yeast-like) in submerged culture. In shake flask studies, we evaluated the impact of aeration on the mode of growth of I. fumosorosea. Using 250 mL baffled Erlenmeyer flasks, culture volumes of 50, 100, 150, a...

  9. Functional characterization of candidate effector proteins identified from the wheat scab fungus Fusarium graminearum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fungal pathogens often produce certain small secreted cysteine-rich proteins (SSCPs) during pathogenesis that may function in triggering resistance or susceptibility in specific host plants. We have recently identified a total of 190 SSCPs encoded in the genome of the wheat scab fungus Fusarium gra...

  10. Xylarenones C-E from an endophytic fungus isolated from Alibertia macrophylla.

    PubMed

    de Oliveira, Camila Martins; Silva, Geraldo Humberto; Regasini, Luis Octávio; Flausino, Otávio; López, Silvia Noelí; Abissi, Bárbara Marcondes; Berlinck, Roberto Gomes de Souza; Sette, Lara Durães; Bonugli-Santos, Rafaella Costa; Rodrigues, André; Bolzani, Vanderlan da Silva; Araujo, Angela Regina

    2011-06-24

    Xylarenones C-E (2-4), three new eremophilane sesquiterpenes, have been isolated from solid substrate cultures of a Camarops-like endophytic fungus isolated from Alibertia macrophylla. The structures were elucidated by analysis of spectroscopic data. Compounds were evaluated in subtilisin and pepsin protease assays, and compound 2 showed potent inhibitory activity against both proteases.

  11. Functional analysis of the kinome of the wheat scab fungus Fusarium graminearum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    As in many other eukaryotes, protein kinases play major regulatory roles in filamentous fungi. Although the genomes of numerous plant pathogenic fungi have been sequenced, systematic characterization of their kinomes has not been reported. The wheat scab fungus Fusarium graminearum has 116 putative ...

  12. Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2

    PubMed Central

    Riley, Robert; Barry, Kerrie; Cullen, Dan; de Vries, Ronald P.; Hainaut, Matthieu; Hatakka, Annele; Henrissat, Bernard; Kuo, Rita; LaButti, Kurt; Lipzen, Anna; Mäkelä, Miia R.; Sandor, Laura; Spatafora, Joseph W.; Grigoriev, Igor V.; Hibbett, David S.

    2016-01-01

    We report here the first genome sequence of the white-rot fungus Obba rivulosa (Polyporales, Basidiomycota), a polypore known for its lignin-decomposing ability. The genome is based on the homokaryon 3A-2 originating in Finland. The genome is typical in size and carbohydrate active enzyme (CAZy) content for wood-decomposing basidiomycetes. PMID:27634999

  13. BIOTRANSFORMATION OF 2,4,6-TRINITROTOLUENE (TNT) BY A PLANT-ASSOCIATED FUNGUS FUSARIUM OXYSPORUM

    EPA Science Inventory

    The capability of a plant-associated fungus, Fusarium oxyvorum, to transform TNT in liquid cultures was investigated. TNT was transformed into 2-amino-4, 6-dinitrotoluene (2-A-DNT), 4-amino-2, 6-dinitrotoluene (4-A- DNT), and 2, 4-diamino-6-nitrotoluene (2, 4-DAT) via 2- and 4-hy...

  14. Treating sunshine bass eggs with copper sulfate controls fungus and increases survival

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A major obstacle to sunshine bass production is fungal growth on eggs. Copper sulfate (CuSO4) is commonly used for fungus control in channel catfish hatcheries that use troughs, but the effectiveness of it on fish eggs hatched using different systems was not known. Female white bass Morone chrysop...

  15. Copper sulfate controls fungus on sunshine bass eggs and increases survival

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A major obstacle to sunshine bass production is fungal growth on eggs. Copper sulfate (CuSO4) is commonly used for fungus control in channel catfish hatcheries that use troughs, but the effectiveness of it on fish eggs hatched using different systems was not known. Female white bass Morone chrysop...

  16. Anacardic acid induces apoptosis-like cell death in the rice blast fungus Magnaporthe oryzae.

    PubMed

    Muzaffar, Suhail; Bose, Chinchu; Banerji, Ashok; Nair, Bipin G; Chattoo, Bharat B

    2016-01-01

    Anacardic acid (6-pentadecylsalicylic acid), extracted from cashew nut shell liquid, is a natural phenolic lipid well known for its strong antibacterial, antioxidant, and anticancer activities. Its effect has been well studied in bacterial and mammalian systems but remains largely unexplored in fungi. The present study identifies antifungal, cytotoxic, and antioxidant activities of anacardic acid in the rice blast fungus Magnaporthe oryzae. It was found that anacardic acid causes inhibition of conidial germination and mycelial growth in this ascomycetous fungus. Phosphatidylserine externalization, chromatin condensation, DNA degradation, and loss of mitochondrial membrane potential suggest that growth inhibition of fungus is mainly caused by apoptosis-like cell death. Broad-spectrum caspase inhibitor Z-VAD-FMK treatment indicated that anacardic acid induces caspase-independent apoptosis in M. oryzae. Expression of a predicted ortholog of apoptosis-inducing factor (AIF) was upregulated during the process of apoptosis, suggesting the possibility of mitochondria dependent apoptosis via activation of apoptosis-inducing factor. Anacardic acid treatment leads to decrease in reactive oxygen species rather than increase in reactive oxygen species (ROS) accumulation normally observed during apoptosis, confirming the antioxidant properties of anacardic acid as suggested by earlier reports. Our study also shows that anacardic acid renders the fungus highly sensitive to DNA damaging agents like ethyl methanesulfonate (EMS). Treatment of rice leaves with anacardic acid prevents M. oryzae from infecting the plant without affecting the leaf, suggesting that anacardic acid can be an effective antifungal agent. PMID:26381667

  17. Characterization of a brown rot fungus isolated from dwarf flowering almond in Korea.

    PubMed

    Shim, Myoung Yong; Jeon, Young Jae; Kim, Seong Hwan

    2007-03-01

    The fruits showing brown rot symptom on dwarf flowering almond were found in Gongju, Chungchungnam-Do in Korea in July 2005. Small water-soaked lesions on the fruits were initiated, and gradually developed to soft rot covered with gray conidia. Then the diseased fruits were shrunk and became grayish-black mummies. A fungus was isolated from the diseased fruit and its morphological, cultural and molecular genetic characteristics were investigated. Typical blastospores of Monilinia spp. were observed under a light microscope both from tissues of the diseased fruits and from PDA-grown cultures. The fungus grew well at 25℃ and on PDA. The ITS ribosomal DNA region (650 bp) of the fungus was amplified by PCR and analyzed. Comparative data on ITS sequence homology among Monilinia spp., ITS sequence-based phylogram and morphological characteristics showed that the fungus is Monilinia fructicola. This is the first report on Monilinia fructicola causing brown rot on fruits of dwarf flowering almond in Korea.

  18. Characterization of a Brown Rot Fungus Isolated from Dwarf Flowering Almond in Korea

    PubMed Central

    Shim, Myoung Yong; Jeon, Young Jae

    2007-01-01

    The fruits showing brown rot symptom on dwarf flowering almond were found in Gongju, Chungchungnam-Do in Korea in July 2005. Small water-soaked lesions on the fruits were initiated, and gradually developed to soft rot covered with gray conidia. Then the diseased fruits were shrunk and became grayish-black mummies. A fungus was isolated from the diseased fruit and its morphological, cultural and molecular genetic characteristics were investigated. Typical blastospores of Monilinia spp. were observed under a light microscope both from tissues of the diseased fruits and from PDA-grown cultures. The fungus grew well at 25℃ and on PDA. The ITS ribosomal DNA region (650 bp) of the fungus was amplified by PCR and analyzed. Comparative data on ITS sequence homology among Monilinia spp., ITS sequence-based phylogram and morphological characteristics showed that the fungus is Monilinia fructicola. This is the first report on Monilinia fructicola causing brown rot on fruits of dwarf flowering almond in Korea. PMID:24015065

  19. Abundant Respirable Ergot Alkaloids from the Common Airborne Fungus Aspergillus fumigatus†

    PubMed Central

    Panaccione, Daniel G.; Coyle, Christine M.

    2005-01-01

    Ergot alkaloids are mycotoxins that interact with several monoamine receptors, negatively affecting cardiovascular, nervous, reproductive, and immune systems of exposed humans and animals. Aspergillus fumigatus, a common airborne fungus and opportunistic human pathogen, can produce ergot alkaloids in broth culture. The objectives of this study were to determine if A. fumigatus accumulates ergot alkaloids in a respirable form in or on its conidia, to quantify ergot alkaloids associated with conidia produced on several different substrates, and to measure relevant physical properties of the conidia. We found at least four ergot alkaloids, fumigaclavine C, festuclavine, fumigaclavine A, and fumigaclavine B (in order of abundance), associated with conidia of A. fumigatus. Under environmentally relevant conditions, the total mass of ergot alkaloids often constituted >1% of the mass of the conidium. Ergot alkaloids were extracted from conidia produced on all media tested, and the greatest quantities were observed when the fungus was cultured on latex paint or cultured maize seedlings. The values for physical properties of conidia likely to affect their respirability (i.e., diameter, mass, and specific gravity) were significantly lower for A. fumigatus than for Aspergillus nidulans, Aspergillus niger, and Stachybotrys chartarum. The demonstration of relatively high concentrations of ergot alkaloids associated with conidia of A. fumigatus presents opportunities for investigations of potential contributions of the toxins to adverse health effects associated with the fungus and to aspects of the biology of the fungus that contribute to its success. PMID:15933008

  20. Greater taxol yield of fungus Pestalotiopsis hainanensis from dermatitic scurf of the giant panda (Ailuropoda melanoleuca).

    PubMed

    Gu, Yu; Wang, Yanlin; Ma, Xiaoping; Wang, Chengdong; Yue, Guizhou; Zhang, Yuetian; Zhang, Yunyan; Li, Shanshan; Ling, Shanshan; Liu, Xiaomin; Wen, Xintian; Cao, Sanjie; Huang, Xiaobo; Deng, Junliang; Zuo, Zhicai; Yu, Shumin; Shen, Liuhong; Wu, Rui

    2015-01-01

    While taxol yields of fungi from non-animal sources are still low, whether Pestalotiopsis hainanensis isolated from the scurf of a dermatitic giant panda, Ailuropoda melanoleuca, provides a greater taxol yield remains unknown. The objective of the study was to determine the corresponding taxol yield. The structure of the taxol produced by the fungus was evaluated by thin layer chromatography (TLC), ultraviolet (UV) spectroscopy, high-performance liquid chromatography (HPLC), (1)H and (13)C nuclear magnetic resonance spectroscopy ((1)H-NMR and (13)C-NMR), and time-of-flight mass spectrometry (TOF-MS), with standard taxol as a control. The results demonstrated that the P. hainanensis fungus produced taxol, which had the same structure as the standard taxol and yield of 1,466.87 μg/L. This fungal taxol yield from the dermatitic giant panda was significantly greater than those of fungus from non-animal sources. The taxol-producing fungus may be a potential candidate for the production of taxol on an industrial scale.

  1. Using copper sulfate on hybrid striped bass eggs to control fungus and increase survival

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A major obstacle in fish hatcheries is the inevitable fungal growth on eggs. Copper sulfate (CuSO4) is commonly used for fungus control in channel catfish hatcheries that use troughs, but effectiveness on fish eggs hatched using different systems has only recently been investigated. Fish were spawn...

  2. Draft Genome Sequence of Sclerotinia borealis, a Psychrophilic Plant Pathogenic Fungus.

    PubMed

    Mardanov, Andrey V; Beletsky, Alexey V; Kadnikov, Vitaly V; Ignatov, Alexander N; Ravin, Nikolai V

    2014-01-23

    Sclerotinia borealis is a necrotrophic phytopathogenic fungus notable for its wide host range and environmental persistence. It grows at low temperatures, causing snow mold disease of crop plants. To understand the molecular mechanisms of its pathogenesis and adaptation to the psychrophilic lifestyle, we determined the 39.3-Mb draft genome sequence of S. borealis F-4128.

  3. Control of common bunt of wheat under field conditions with the biofumigant fungus Muscodor albus.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Field experiments were conducted to evaluate the biological control potential of the fungus Muscodor albus, when applied as a seed treatment or an in furrow soil treatment, for control of common bunt (CB) of wheat caused by Tilletia caries. For seed treatments, dry rye grain culture of M. albus wa...

  4. Light-mediated control of gene expression in filamentous fungus Trichoderma reesei.

    PubMed

    Wang, Wei; Shi, Xiang-Yu; Wei, Dong-Zhi

    2014-08-01

    We developed a light-mediated system based on synthetic light-switchable transactivators. The transactivators bind promoter upon blue-light exposure and rapidly initiate transcription of target transgenes in filamentous fungus Trichoderma reesei. Light is inexpensive to apply, easily delivered, and instantly removed, and thus has significant advantages over chemical inducers.

  5. Abundant respirable ergot alkaloids from the common airborne fungus Aspergillus fumigatus.

    PubMed

    Panaccione, Daniel G; Coyle, Christine M

    2005-06-01

    Ergot alkaloids are mycotoxins that interact with several monoamine receptors, negatively affecting cardiovascular, nervous, reproductive, and immune systems of exposed humans and animals. Aspergillus fumigatus, a common airborne fungus and opportunistic human pathogen, can produce ergot alkaloids in broth culture. The objectives of this study were to determine if A. fumigatus accumulates ergot alkaloids in a respirable form in or on its conidia, to quantify ergot alkaloids associated with conidia produced on several different substrates, and to measure relevant physical properties of the conidia. We found at least four ergot alkaloids, fumigaclavine C, festuclavine, fumigaclavine A, and fumigaclavine B (in order of abundance), associated with conidia of A. fumigatus. Under environmentally relevant conditions, the total mass of ergot alkaloids often constituted >1% of the mass of the conidium. Ergot alkaloids were extracted from conidia produced on all media tested, and the greatest quantities were observed when the fungus was cultured on latex paint or cultured maize seedlings. The values for physical properties of conidia likely to affect their respirability (i.e., diameter, mass, and specific gravity) were significantly lower for A. fumigatus than for Aspergillus nidulans, Aspergillus niger, and Stachybotrys chartarum. The demonstration of relatively high concentrations of ergot alkaloids associated with conidia of A. fumigatus presents opportunities for investigations of potential contributions of the toxins to adverse health effects associated with the fungus and to aspects of the biology of the fungus that contribute to its success.

  6. Using copper sulfate on hybrid striped bass eggs to control fungus and increase survival

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A major obstacle in fish hatcheries is reduced hatch rates due to fungal growth on eggs. Copper sulfate (CuSO4) is commonly used for fungus control in catfish hatcheries that use troughs, but effectiveness on other species of fish eggs in different hatching systems has only recently been investigat...

  7. Bacterial community composition and diversity in an ancestral ant fungus symbiosis.

    PubMed

    Kellner, Katrin; Ishak, Heather D; Linksvayer, Timothy A; Mueller, Ulrich G

    2015-07-01

    Fungus-farming ants (Hymenoptera: Formicidae, Attini) exhibit some of the most complex microbial symbioses because both macroscopic partners (ants and fungus) are associated with a rich community of microorganisms. The ant and fungal microbiomes are thought to serve important beneficial nutritional and defensive roles in these symbioses. While most recent research has investigated the bacterial communities in the higher attines (e.g. the leaf-cutter ant genera Atta and Acromyrmex), which are often associated with antibiotic-producing Actinobacteria, very little is known about the microbial communities in basal lineages, labeled as 'lower attines', which retain the ancestral traits of smaller and more simple societies. In this study, we used 16S amplicon pyrosequencing to characterize bacterial communities of the lower attine ant Mycocepurus smithii among seven sampling sites in central Panama. We discovered that ant and fungus garden-associated microbiota were distinct from surrounding soil, but unlike the situation in the derived fungus-gardening ants, which show distinct ant and fungal microbiomes, microbial community structure of the ants and their fungi were similar. Another surprising finding was that the abundance of actinomycete bacteria was low and instead, these symbioses were characterized by an abundance of Lactobacillus and Pantoea bacteria. Furthermore, our data indicate that Lactobacillus strains are acquired from the environment rather than acquired vertically. PMID:26113689

  8. Polyketide and benzopyran compounds of an endophytic fungus isolated from Cinnamomum mollissimum: biological activity and structure

    PubMed Central

    Santiago, Carolina; Sun, Lin; Munro, Murray Herbert Gibson; Santhanam, Jacinta

    2014-01-01

    Objective To study bioactivity and compounds produced by an endophytic Phoma sp. fungus isolated from the medicinal plant Cinnamomum mollissimum. Methods Compounds produced by the fungus were extracted from fungal broth culture with ethyl acetate. This was followed by bioactivity profiling of the crude extract fractions obtained via high performance liquid chromatography. The fractions were tested for cytotoxicity to P388 murine leukemic cells and antimicrobial activity against bacteria and pathogenic fungi. Compounds purified from active fractions which showed antibacterial, antifungal and cytotoxic activities were identified using capillary nuclear magnetic resonance analysis, mass spectrometry and admission to AntiMarin database. Results Three known compounds, namely 4-hydroxymellein, 4,8-dihydroxy-6-methoxy-3-methyl-3,4-dihydro-1H-isochromen-1-one and 1-(2,6-dihydroxyphenyl) ethanone, were isolated from the fungus. The polyketide compound 4-hydroxymellein showed high inhibitory activity against P388 murine leukemic cells (94.6%) and the bacteria Bacillus subtilis (97.3%). Meanwhile, 4,8-dihydroxy-6-methoxy-3-methyl-3,4-dihydro-1H-isochromen-1-one, a benzopyran compound, demonstrated moderate inhibitory activity against P388 murine leukemic cells (48.8%) and the fungus Aspergillus niger (56.1%). The second polyketide compound, 1 (2,6-dihydroxyphenyl) ethanone was inactive against the tested targets. Conclusions These findings demonstrate the potential of endophytes as producers of pharmacologically important compounds, including polyketides which are major secondary metabolites in fungi. PMID:25183332

  9. Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens

    PubMed Central

    Aylward, Frank O; Burnum, Kristin E; Scott, Jarrod J; Suen, Garret; Tringe, Susannah G; Adams, Sandra M; Barry, Kerrie W; Nicora, Carrie D; Piehowski, Paul D; Purvine, Samuel O; Starrett, Gabriel J; Goodwin, Lynne A; Smith, Richard D; Lipton, Mary S; Currie, Cameron R

    2012-01-01

    Herbivores gain access to nutrients stored in plant biomass largely by harnessing the metabolic activities of microbes. Leaf-cutter ants of the genus Atta are a hallmark example; these dominant neotropical herbivores cultivate symbiotic fungus gardens on large quantities of fresh plant forage. As the external digestive system of the ants, fungus gardens facilitate the production and sustenance of millions of workers. Using metagenomic and metaproteomic techniques, we characterize the bacterial diversity and physiological potential of fungus gardens from two species of Atta. Our analysis of over 1.2 Gbp of community metagenomic sequence and three 16S pyrotag libraries reveals that in addition to harboring the dominant fungal crop, these ecosystems contain abundant populations of Enterobacteriaceae, including the genera Enterobacter, Pantoea, Klebsiella, Citrobacter and Escherichia. We show that these bacterial communities possess genes associated with lignocellulose degradation and diverse biosynthetic pathways, suggesting that they play a role in nutrient cycling by converting the nitrogen-poor forage of the ants into B-vitamins, amino acids and other cellular components. Our metaproteomic analysis confirms that bacterial glycosyl hydrolases and proteins with putative biosynthetic functions are produced in both field-collected and laboratory-reared colonies. These results are consistent with the hypothesis that fungus gardens are specialized fungus–bacteria communities that convert plant material into energy for their ant hosts. Together with recent investigations into the microbial symbionts of vertebrates, our work underscores the importance of microbial communities in the ecology and evolution of herbivorous metazoans. PMID:22378535

  10. Bacterium induces cryptic meroterpenoid pathway in the pathogenic fungus Aspergillus fumigatus.

    PubMed

    König, Claudia C; Scherlach, Kirstin; Schroeckh, Volker; Horn, Fabian; Nietzsche, Sandor; Brakhage, Axel A; Hertweck, Christian

    2013-05-27

    Stimulating encounter: The intimate, physical interaction between the soil-derived bacterium Streptomyces rapamycinicus and the human pathogenic fungus Aspergillus fumigatus led to the activation of an otherwise silent polyketide synthase (PKS) gene cluster coding for an unusual prenylated polyphenol (fumicycline A). The meroterpenoid pathway is regulated by a pathway-specific activator gene as well as by epigenetic factors.

  11. Greater taxol yield of fungus Pestalotiopsis hainanensis from dermatitic scurf of the giant panda (Ailuropoda melanoleuca).

    PubMed

    Gu, Yu; Wang, Yanlin; Ma, Xiaoping; Wang, Chengdong; Yue, Guizhou; Zhang, Yuetian; Zhang, Yunyan; Li, Shanshan; Ling, Shanshan; Liu, Xiaomin; Wen, Xintian; Cao, Sanjie; Huang, Xiaobo; Deng, Junliang; Zuo, Zhicai; Yu, Shumin; Shen, Liuhong; Wu, Rui

    2015-01-01

    While taxol yields of fungi from non-animal sources are still low, whether Pestalotiopsis hainanensis isolated from the scurf of a dermatitic giant panda, Ailuropoda melanoleuca, provides a greater taxol yield remains unknown. The objective of the study was to determine the corresponding taxol yield. The structure of the taxol produced by the fungus was evaluated by thin layer chromatography (TLC), ultraviolet (UV) spectroscopy, high-performance liquid chromatography (HPLC), (1)H and (13)C nuclear magnetic resonance spectroscopy ((1)H-NMR and (13)C-NMR), and time-of-flight mass spectrometry (TOF-MS), with standard taxol as a control. The results demonstrated that the P. hainanensis fungus produced taxol, which had the same structure as the standard taxol and yield of 1,466.87 μg/L. This fungal taxol yield from the dermatitic giant panda was significantly greater than those of fungus from non-animal sources. The taxol-producing fungus may be a potential candidate for the production of taxol on an industrial scale. PMID:25245682

  12. Using copper sulfate to control egg fungus at Keo Fish Farm

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Keo Fish Farm is the biggest producer of hybrid striped bass fry in the world. The hatchery manager asked about treatments to control fungus on eggs which occurred fairly often. Our lab had just successfully completed an effectiveness study that was needed in our pursuit of gaining FDA-approval to...

  13. Biodegradation of pentachlorophenol by the white rot fungus Phanerochaete chrysosporium (1988)

    EPA Science Inventory

    Extensive biodegradation of pentachlorophenol (PCP) by the white rot fungus Phanerochaete chrysosporium was demonstrated by the disappearance and mineralization of [14C]PCP in nutrient nitrogen-limited culture. Mass balance analyses demonstrated the formation of water-soluble met...

  14. Physiology and molecular characteristics of a pine wilt nematode-trapping fungus, Monacrosporium megalosporum.

    PubMed

    Kano, Sanae; Aimi, Tadanori; Masumoto, Seita; Kitamoto, Yutaka; Morinaga, Tsutomu

    2004-09-01

    We isolated the nematode-trapping fungus Monacrosporium megalosporum from nature and examined its morphology, physiology and molecular characteristics. The nematode-trapping device of this fungus is a three-dimensional network. This fungus captures the pine wilt nematode (Bursaphelenchus xylophilus), but not a non-phytopathogenic nematode that is morphologically similar to B. xylophilus. The phylogenic relationship of the nucleotide sequence of the rDNA ITS region was close to those of M. thaumasium and Geniculifera eudermata, which also have nematode-trapping devices that are three-dimensional networks. Acidic pH inhibited both the liberation and regeneration of protoplasts. Moreover, cytoplasmic granulation of protoplasts was found below pH 6.0. Mycelial growth on agar media was also inhibited below pH 4, but not at pH 9. These results strongly suggest that the activity of this fungus is inhibited by acid rain in the field. Therefore, development of pine wilt disease might be a secondary effect of acid rain.

  15. Metabolites from the endophytic fungus Sporormiella minimoides isolated from Hintonia latiflora

    Technology Transfer Automated Retrieval System (TEKTRAN)

    An extract of the solid cultures of Sporormiella minimoides (Sporormiaceae) isolated as an endophytic fungus from Hintonia latiflora (Rubiaceae), yielded three polyketides, 3,6-dimethoxy-8-methyl-1H,6H-benzo[de]isochromene-1,9-dione, 3-hydroxy-1,6,10-trimethoxy-8-methyl-1H,3H-benzo[de]isochromen-9-o...

  16. Clove oil and fungus compounds: Can nematode suppression be achieved without phytotoxicity?

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Natural products from a plant (Syzygium aromaticum) and a fungus (Aspergillus sp.) were examined for the presence of compounds with potential for application as novel nematicides. The plant-derived material, clove oil, was tested in the greenhouse against the nematode Meloidogyne incognita on cucum...

  17. Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2.

    PubMed

    Miettinen, Otto; Riley, Robert; Barry, Kerrie; Cullen, Dan; de Vries, Ronald P; Hainaut, Matthieu; Hatakka, Annele; Henrissat, Bernard; Hildén, Kristiina; Kuo, Rita; LaButti, Kurt; Lipzen, Anna; Mäkelä, Miia R; Sandor, Laura; Spatafora, Joseph W; Grigoriev, Igor V; Hibbett, David S

    2016-01-01

    We report here the first genome sequence of the white-rot fungus Obba rivulosa (Polyporales, Basidiomycota), a polypore known for its lignin-decomposing ability. The genome is based on the homokaryon 3A-2 originating in Finland. The genome is typical in size and carbohydrate active enzyme (CAZy) content for wood-decomposing basidiomycetes. PMID:27634999

  18. Ethanol Production from Various Sugars and Cellulosic Biomass by White Rot Fungus Lenzites betulinus.

    PubMed

    Im, Kyung Hoan; Nguyen, Trung Kien; Choi, Jaehyuk; Lee, Tae Soo

    2016-03-01

    Lenzites betulinus, known as gilled polypore belongs to Basidiomycota was isolated from fruiting body on broadleaf dead trees. It was found that the mycelia of white rot fungus Lenzites betulinus IUM 5468 produced ethanol from various sugars, including glucose, mannose, galactose, and cellobiose with a yield of 0.38, 0.26, 0.07, and 0.26 g of ethanol per gram of sugar consumed, respectively. This fungus relatively exhibited a good ethanol production from xylose at 0.26 g of ethanol per gram of sugar consumed. However, the ethanol conversion rate of arabinose was relatively low (at 0.07 g of ethanol per gram sugar). L. betulinus was capable of producing ethanol directly from rice straw and corn stalks at 0.22 g and 0.16 g of ethanol per gram of substrates, respectively, when this fungus was cultured in a basal medium containing 20 g/L rice straw or corn stalks. These results indicate that L. betulinus can produce ethanol efficiently from glucose, mannose, and cellobiose and produce ethanol very poorly from galactose and arabinose. Therefore, it is suggested that this fungus can ferment ethanol from various sugars and hydrolyze cellulosic materials to sugars and convert them to ethanol simultaneously.

  19. Biodegradation of crystal violet by the white rot fungus phanerochaete chrysosporium

    SciTech Connect

    Bumpus, J.A.; Brock, B.J.

    1988-01-01

    Biodegradation of crystal violet (N,N,N',N',N',N''- hexamethylpararosaniline) in ligninolytic (nitrogen-limited) cultures of the white rot fungus Phanerochaete chrysosporium was demonstrated by the disappearance of crystal violet and by the identification of three metabolites (N,N,N',N',N'' -pentamethylpararosaniline, N,N,N',N'' -tetramethylpararosaniline, and N,N',N'' -trimethylpararosaniline) formed by sequential N-demethylation of the parent compound. Metabolite formation also occurred when crystal violet was incubated with the extracellular fluid obtained from ligninolytic cultures of this fungus, provided that an H2O2-generating system was supplied. This, as well as the fact that a purified ligninase catalyzed N-demethylation of crystal violet, demonstrated that biodegradation of crystal violet by this fungus is dependent, at least in part, upon its lignin-degrading system. In addition to crystal violet, six other triphenylmethane dyes (pararosaniline, cresol red, bromphenol blue, ethyl violet, malachite green, and brilliant green) were shown to be degraded by the lignin-degrading system of this fungus.

  20. (+)-Ascosalitoxin and vermelhotin, a calmodulin inhibitor, from an endophytic fungus isolated from Hintonia latiflora

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Chemical investigation of the endophytic fungus 39140-2, isolated from the medicinal plant Hintonia latiflora, yielded the known polyketide vermelhotin (1) and a new salycilic aldehyde derivative, namely 9S,11R-(+)-ascosalitoxin (2). The structure and absolute configuration of the new compound was ...

  1. An in vivo transcriptome for entomopathogenic fungus Metarhizium robertsii ARSEF 2575

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Molecular mechanisms underlying the pathogenic process of the insect pathogen Metarhizium robertsii ARSEF 2575 in its host are only partially understood. To probe the transcriptional responses of the fungus during the interaction with insects, we have developed a method to specifically recover patho...

  2. Vertical transmission as the key to the colonization of Madagascar by fungus-growing termites?

    PubMed

    Nobre, T; Eggleton, P; Aanen, D K

    2010-02-01

    The mutualism between fungus-growing termites (Macrotermitinae) and their mutualistic fungi (Termitomyces) began in Africa. The fungus-growing termites have secondarily colonized Madagascar and only a subset of the genera found in Africa is found on this isolated island. Successful long-distance colonization may have been severely constrained by the obligate interaction of the termites with fungal symbionts and the need to acquire these symbionts secondarily from the environment for most species (horizontal symbiont transmission). Consistent with this hypothesis, we show that all extant species of fungus-growing termites of Madagascar are the result of a single colonization event of termites belonging to one of the only two groups with vertical symbiont transmission, and we date this event at approximately 13 Mya (Middle/Upper Miocene). Vertical symbiont transmission may therefore have facilitated long-distance dispersal since both partners disperse together. In contrast to their termite hosts, the fungal symbionts have colonized Madagascar multiple times, suggesting that the presence of fungus-growing termites may have facilitated secondary colonizations of the symbiont. Our findings indicate that the absence of the right symbionts in a new environment can prevent long-distance dispersal of symbioses relying on horizontal symbiont acquisition.

  3. Purification and Partial Characterization of a Laccase from the White Rot Fungus Phanerochaete flavido-alba

    PubMed Central

    Perez, J.; Martinez, J.; de la Rubia, T.

    1996-01-01

    In addition to excreting lignin-degrading peroxidases, the white rot fungus Phanerochaete flavido-alba also excretes a laccase. This protein was purified to homogeneity and found to have a molecular weight of 94,000 and an isoelectric point lower than 3.55. Its UV-visible spectrum is typical of copper-containing proteins. PMID:16535452

  4. Agrobacterium-mediated transformation of the white-rot fungus Physisporinus vitreus.

    PubMed

    Schubert, M; Stührk, C; Fuhr, M J; Schwarze, F W M R

    2013-11-01

    The biotechnologically important white-rot fungus Physisporinus vitreus was co-cultivated with Agrobacterium tumefaciens AGL-1 carrying plasmids with nourseothricin resistance as the selectable marker gene and red fluorescence protein as a visual marker. Mitotically stable transformed isolates were obtained showing red fluorescence protein activity.

  5. Abundant respirable ergot alkaloids from the common airborne fungus Aspergillus fumigatus.

    PubMed

    Panaccione, Daniel G; Coyle, Christine M

    2005-06-01

    Ergot alkaloids are mycotoxins that interact with several monoamine receptors, negatively affecting cardiovascular, nervous, reproductive, and immune systems of exposed humans and animals. Aspergillus fumigatus, a common airborne fungus and opportunistic human pathogen, can produce ergot alkaloids in broth culture. The objectives of this study were to determine if A. fumigatus accumulates ergot alkaloids in a respirable form in or on its conidia, to quantify ergot alkaloids associated with conidia produced on several different substrates, and to measure relevant physical properties of the conidia. We found at least four ergot alkaloids, fumigaclavine C, festuclavine, fumigaclavine A, and fumigaclavine B (in order of abundance), associated with conidia of A. fumigatus. Under environmentally relevant conditions, the total mass of ergot alkaloids often constituted >1% of the mass of the conidium. Ergot alkaloids were extracted from conidia produced on all media tested, and the greatest quantities were observed when the fungus was cultured on latex paint or cultured maize seedlings. The values for physical properties of conidia likely to affect their respirability (i.e., diameter, mass, and specific gravity) were significantly lower for A. fumigatus than for Aspergillus nidulans, Aspergillus niger, and Stachybotrys chartarum. The demonstration of relatively high concentrations of ergot alkaloids associated with conidia of A. fumigatus presents opportunities for investigations of potential contributions of the toxins to adverse health effects associated with the fungus and to aspects of the biology of the fungus that contribute to its success. PMID:15933008

  6. Antileukemic alpha-pyrone derivatives from the endophytic fungus Alternaria phragmospora

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Four new (1–4) and two known (5 and 6)a-pyrone derivatives have been isolated from Alternaria phragmospora, an endophytic fungus from Vinca rosea, leaves. The isolated compounds were chemically identi'ed to be 5-butyl-4-methoxy-6-methyl-2H-pyran-2-one (2) 5-butyl-6-(hydroxymethyl)-4-methoxy-2H-py...

  7. Ethanol Production from Various Sugars and Cellulosic Biomass by White Rot Fungus Lenzites betulinus

    PubMed Central

    Im, Kyung Hoan; Nguyen, Trung Kien; Choi, Jaehyuk

    2016-01-01

    Lenzites betulinus, known as gilled polypore belongs to Basidiomycota was isolated from fruiting body on broadleaf dead trees. It was found that the mycelia of white rot fungus Lenzites betulinus IUM 5468 produced ethanol from various sugars, including glucose, mannose, galactose, and cellobiose with a yield of 0.38, 0.26, 0.07, and 0.26 g of ethanol per gram of sugar consumed, respectively. This fungus relatively exhibited a good ethanol production from xylose at 0.26 g of ethanol per gram of sugar consumed. However, the ethanol conversion rate of arabinose was relatively low (at 0.07 g of ethanol per gram sugar). L. betulinus was capable of producing ethanol directly from rice straw and corn stalks at 0.22 g and 0.16 g of ethanol per gram of substrates, respectively, when this fungus was cultured in a basal medium containing 20 g/L rice straw or corn stalks. These results indicate that L. betulinus can produce ethanol efficiently from glucose, mannose, and cellobiose and produce ethanol very poorly from galactose and arabinose. Therefore, it is suggested that this fungus can ferment ethanol from various sugars and hydrolyze cellulosic materials to sugars and convert them to ethanol simultaneously. PMID:27103854

  8. Seasonal fungus prevalence inside and outside of domestic environments in the subtropical climate

    NASA Astrophysics Data System (ADS)

    Kuo, Yu-Mei; Li, Chin-Shan

    Airborne fungi were collected using the N6 Andersen sampler at 1-month intervals for I yr inside and outside of six apartments in Taipei. It was shown that seasonal variations of indoor and outdoor fungus number concentrations were remarkable and indoor and outdoor air spore counts varied considerably from residence to residence. The geometric mean concentrations of indoor and outdoor fungi were found to be higher than 1000 CFU m -3 during the summer months and abruptly decreased to below 100 CFU m -3 in the winter. A high correlation coefficient was found between fungus concentrations in living rooms and outdoors. Moreover, the ratios of indoor to outdoor fungus concentrations (0.21-3.81) were too low to indicate the presence of any indoor fungus sources. A large variety of mold genera was isolated, and Aspergillus, Penicillium, Cladosporium, and yeast were observed to be predominant. Indoors, Penicillium showed the highest concentrations in the summer and autumn months, while Asperyillus and Cladosporium were also observed frequently. The outside air was dominated by Asperyillus, Penicillium, and Cladosporium in spring, summer, and autumn, but by Penicillium and yeast during winter months. In addition, Cladosporium was found to be absent indoors and outdoors in the winter.

  9. Biological pretreatment of corn stover with white-rot fungus for improved enzymatic hydrolysis

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Biological pretreatment of lignocellulosic biomass by white-rot fungus can represent a low-cost and eco-friendly alternative to harsh physical, chemical or physico-chemical pretreatment methods to facilitate enzymatic hydrolysis. However, fungal pretreatment can cause carbohydrate loss and it is, th...

  10. Xylaolide A, a new lactone from the fungus Xylariaceae sp. DPZ-SY43.

    PubMed

    Yang, Bin; Dong, Junde; Lin, Xiuping; Tao, Huaming; Zhou, Xuefeng; Liu, Yonghong

    2014-01-01

    Chemical investigation of the fungus Xylariaceae sp. DPZ-SY43 has led to the isolation of a new compound, xylaolide A (1) together with three known compounds (2-4). The structures were established by analysing the spectroscopic data. Compound 1 was evaluated for its cytotoxicity.

  11. Recent Results on Semileptonic Decays at Babar

    SciTech Connect

    Serrano, Justine; /Orsay, LAL

    2011-11-07

    Some recent BABAR results on semileptonic decays are presented. They focus on the determination of the CKM matrix elements |V{sub ub}| and |V{sub cb}| in inclusive and exclusive b {yields} u{ell}v and b {yields} c{ell}v decays, and on form factors measurement in exclusive c {yields} s{ell}v decays. Semileptonic decays play a crucial role in the determination of the unitarity triangle parameters: decays of the b quark give access to the CKM matrix elements |V{sub ub}| and |V{sub cb}|, while charm decays provide a way to validate lattice QCD computations through form factors measurements. Such calculations provide theoretical inputs that are used, especially, in the b sector. A lot of new results have been obtained by the BABAR collaboration during the last years, thanks to the large b{bar b} and c{bar c} production cross-sections and to the large recorded statistics. Some of these measurements are presented here.

  12. Enhanced tau neutrino appearance through invisible decay

    NASA Astrophysics Data System (ADS)

    Pagliaroli, Giulia; Di Marco, Natalia; Mannarelli, Massimo

    2016-06-01

    The decay of neutrino mass eigenstates leads to a change of the conversion and survival probability of neutrino flavor eigenstates. Exploiting the recent results released by the long-baseline OPERA experiment we perform the statistical investigation of the neutrino invisible decay hypothesis in the νμ→ντ appearance channel. We find that the neutrino decay provides an enhancement of the expected tau appearance signal with respect to the standard oscillation scenario for the long-baseline OPERA experiment. The increase of the νμ→ντ conversion probability by the decay of one of the mass eigenstates is due to a reduction of the "destructive interference" among the different massive neutrino components. Despite data showing a very mild preference for invisible decays with respect to the oscillations only hypothesis, we provide an upper limit for the neutrino decay lifetime in this channel of τ3/m3≳1.3 ×10-13 s /eV at the 90% confidence level.

  13. Power spectrum analyses of nuclear decay rates

    NASA Astrophysics Data System (ADS)

    Javorsek, D.; Sturrock, P. A.; Lasenby, R. N.; Lasenby, A. N.; Buncher, J. B.; Fischbach, E.; Gruenwald, J. T.; Hoft, A. W.; Horan, T. J.; Jenkins, J. H.; Kerford, J. L.; Lee, R. H.; Longman, A.; Mattes, J. J.; Morreale, B. L.; Morris, D. B.; Mudry, R. N.; Newport, J. R.; O'Keefe, D.; Petrelli, M. A.; Silver, M. A.; Stewart, C. A.; Terry, B.

    2010-10-01

    We provide the results from a spectral analysis of nuclear decay data displaying annually varying periodic fluctuations. The analyzed data were obtained from three distinct data sets: 32Si and 36Cl decays reported by an experiment performed at the Brookhaven National Laboratory (BNL), 56Mn decay reported by the Children's Nutrition Research Center (CNRC), but also performed at BNL, and 226Ra decay reported by an experiment performed at the Physikalisch-Technische Bundesanstalt (PTB) in Germany. All three data sets exhibit the same primary frequency mode consisting of an annual period. Additional spectral comparisons of the data to local ambient temperature, atmospheric pressure, relative humidity, Earth-Sun distance, and their reciprocals were performed. No common phases were found between the factors investigated and those exhibited by the nuclear decay data. This suggests that either a combination of factors was responsible, or that, if it was a single factor, its effects on the decay rate experiments are not a direct synchronous modulation. We conclude that the annual periodicity in these data sets is a real effect, but that further study involving additional carefully controlled experiments will be needed to establish its origin.

  14. Dark decay of the top quark

    DOE PAGES

    Kong, Kyoungchul; Lee, Hye -Sung; Park, Myeonghun

    2014-04-01

    We suggest top quark decays as a venue to search for light dark force carriers. Top quark is the heaviest particle in the standard model whose decays are relatively poorly measured, allowing sufficient room for exotic decay modes from new physics. A very light (GeV scale) dark gauge boson (Z') is a recently highlighted hypothetical particle that can address some astrophysical anomalies as well as the 3.6 σ deviation in the muon g-2 measurement. We present and study a possible scenario that top quark decays as t → b W + Z's. This is the same as the dominant topmore » quark decay (t → b W) accompanied by one or multiple dark force carriers. The Z' can be easily boosted, and it can decay into highly collimated leptons (lepton-jet) with large branching ratio. In addition, we discuss the implications for the Large Hadron Collider experiments including the analysis based on the lepton-jets.« less

  15. Ratios of heavy hadron semileptonic decay rates

    SciTech Connect

    Gronau, Michael; Rosner, Jonathan L.

    2011-02-01

    Ratios of charmed meson and baryon semileptonic decay rates appear to be satisfactorily described by considering only the lowest-lying (S-wave) hadronic final states and assuming the kinematic factor describing phase space suppression is the same as that for free quarks. For example, the rate for D{sub s} semileptonic decay is known to be (17.0{+-}5.3)% lower than those for D{sup 0} or D{sup +}, and the model accounts for this difference. When applied to hadrons containing b quarks, this method implies that the B{sub s} semileptonic decay rate is about 1% higher than that of the nonstrange B mesons. This small difference thus suggests surprisingly good local quark-hadron duality for B semileptonic decays, complementing the expectation based on inclusive quark-hadron duality that these differences in rates should not exceed a few tenths of a percent. For {Lambda}{sub b} semileptonic decay, however, the inclusive rate is predicted to be about 13% greater than that of the nonstrange B mesons. This value, representing a considerable departure from a calculation using a heavy-quark expansion, is close to the corresponding experimental ratio {Gamma}({Lambda}{sub b})/{Gamma}(B)=1.13{+-}0.03 of total decay rates.

  16. SnoRNAs from the filamentous fungus Neurospora crassa: structural, functional and evolutionary insights

    PubMed Central

    2009-01-01

    Background SnoRNAs represent an excellent model for studying the structural and functional evolution of small non-coding RNAs involved in the post-transcriptional modification machinery for rRNAs and snRNAs in eukaryotic cells. Identification of snoRNAs from Neurospora crassa, an important model organism playing key roles in the development of modern genetics, biochemistry and molecular biology will provide insights into the evolution of snoRNA genes in the fungus kingdom. Results Fifty five box C/D snoRNAs were identified and predicted to guide 71 2'-O-methylated sites including four sites on snRNAs and three sites on tRNAs. Additionally, twenty box H/ACA snoRNAs, which potentially guide 17 pseudouridylations on rRNAs, were also identified. Although not exhaustive, the study provides the first comprehensive list of two major families of snoRNAs from the filamentous fungus N. crassa. The independently transcribed strategy dominates in the expression of box H/ACA snoRNA genes, whereas most of the box C/D snoRNA genes are intron-encoded. This shows that different genomic organizations and expression modes have been adopted by the two major classes of snoRNA genes in N. crassa . Remarkably, five gene clusters represent an outstanding organization of box C/D snoRNA genes, which are well conserved among yeasts and multicellular fungi, implying their functional importance for the fungus cells. Interestingly, alternative splicing events were found in the expression of two polycistronic snoRNA gene hosts that resemble the UHG-like genes in mammals. Phylogenetic analysis further revealed that the extensive separation and recombination of two functional elements of snoRNA genes has occurred during fungus evolution. Conclusion This is the first genome-wide analysis of the filamentous fungus N. crassa snoRNAs that aids in understanding the differences between unicellular fungi and multicellular fungi. As compared with two yeasts, a more complex pattern of methylation guided by

  17. Decay Data Evaluation Project: Evaluation of (52)Fe nuclear decay data.

    PubMed

    Luca, Aurelian

    2016-03-01

    Within the Decay Data Evaluation Project (DDEP) and the IAEA Coordinated Research Project no. F41029, the evaluation of the nuclear decay data of (52)Fe, a radionuclide of interest in nuclear medicine, was performed. The main nuclear decay data evaluated are: the half-life, decay energy, energies and probabilities of the electron capture and β(+) transitions, internal conversion coefficients and gamma-ray energies and emission intensities. This new evaluation, made using the DDEP methodology and tools, was included in the DDEP database NUCLEIDE.

  18. Use of a non-homologous end-joining-deficient strain (delta-ku70) of the biocontrol fungus Trichoderma virens to investigate the function of the laccase gene lcc1 in sclerotia degradation

    PubMed Central

    Catalano, Valentina; Vergara, Mariarosaria; Hauzenberger, Jasmin R.; Seiboth, Bernhard; Sarrocco, Sabrina; Vannacci, Giovanni; Kubicek, Christian P.

    2010-01-01

    The aim of this study was to apply a generated Δtku70 strain with increased homologous recombination efficiency from the mycoparasitic fungus Trichoderma virens for studying the involvement of laccases in the degradation of sclerotia of plant pathogenic fungi. Inactivation of the non-homologous end-joining pathway has become a successful tool in filamentous fungi to overcome poor targeting efficiencies for genetic engineering. Here, we applied this principle to the biocontrol fungus T. virens, strain I10, by deleting its tku70 gene. This strain was subsequently used to delete the laccase gene lcc1, which we found to be expressed after interaction of T. virens with sclerotia of the plant pathogenic fungi Botrytis cinerea and Sclerotinia sclerotiorum. Lcc1 was strongly upregulated at early colonization of B. cinerea sclerotia and steadily induced during colonization of S. sclerotiorum sclerotia. The Δtku70Δlcc1 mutant was altered in its ability to degrade the sclerotia of B. cinerea and S. sclerotiorum. Interestingly, while the decaying ability for B. cinerea sclerotia was significantly decreased, that to degrade S. sclerotiorum sclerotia was even enhanced, suggesting the operation of different mechanisms in the mycoparasitism of these two types of sclerotia by the laccase LCC1. PMID:20872221

  19. Use of a non-homologous end-joining-deficient strain (delta-ku70) of the biocontrol fungus Trichoderma virens to investigate the function of the laccase gene lcc1 in sclerotia degradation.

    PubMed

    Catalano, Valentina; Vergara, Mariarosaria; Hauzenberger, Jasmin R; Seiboth, Bernhard; Sarrocco, Sabrina; Vannacci, Giovanni; Kubicek, Christian P; Seidl-Seiboth, Verena

    2011-02-01

    The aim of this study was to apply a generated Δtku70 strain with increased homologous recombination efficiency from the mycoparasitic fungus Trichoderma virens for studying the involvement of laccases in the degradation of sclerotia of plant pathogenic fungi. Inactivation of the non-homologous end-joining pathway has become a successful tool in filamentous fungi to overcome poor targeting efficiencies for genetic engineering. Here, we applied this principle to the biocontrol fungus T. virens, strain I10, by deleting its tku70 gene. This strain was subsequently used to delete the laccase gene lcc1, which we found to be expressed after interaction of T. virens with sclerotia of the plant pathogenic fungi Botrytis cinerea and Sclerotinia sclerotiorum. Lcc1 was strongly upregulated at early colonization of B. cinerea sclerotia and steadily induced during colonization of S. sclerotiorum sclerotia. The Δtku70Δlcc1 mutant was altered in its ability to degrade the sclerotia of B. cinerea and S. sclerotiorum. Interestingly, while the decaying ability for B. cinerea sclerotia was significantly decreased, that to degrade S. sclerotiorum sclerotia was even enhanced, suggesting the operation of different mechanisms in the mycoparasitism of these two types of sclerotia by the laccase LCC1. PMID:20872221

  20. Genome analysis of Daldinia eschscholtzii strains UM 1400 and UM 1020, wood-decaying fungi isolated from human hosts

    SciTech Connect

    Chan, Chai Ling; Yew, Su Mei; Ngeow, Yun Fong; Na, Shiang Ling; Lee, Kok Wei; Hoh, Chee-Choong; Yee, Wai-Yan; Ng, Kee Peng

    2015-11-18

    Background: Daldinia eschscholtzii is a wood-inhabiting fungus that causes wood decay under certain conditions. It has a broad host range and produces a large repertoire of potentially bioactive compounds. However, there is no extensive genome analysis on this fungal species. Results: Two fungal isolates (UM 1400 and UM 1020) from human specimens were identified as Daldinia eschscholtzii by morphological features and ITS-based phylogenetic analysis. Both genomes were similar in size with 10,822 predicted genes in UM 1400 (35.8 Mb) and 11,120 predicted genes in UM 1020 (35.5 Mb). A total of 751 gene families were shared among both UM isolates, including gene families associated with fungus-host interactions. In the CAZyme comparative analysis, both genomes were found to contain arrays of CAZyme related to plant cell wall degradation. Genes encoding secreted peptidases were found in the genomes, which encode for the peptidases involved in the degradation of structural proteins in plant cell wall. In addition, arrays of secondary metabolite backbone genes were identified in both genomes, indicating of their potential to produce bioactive secondary metabolites. Both genomes also contained an abundance of gene encoding signaling components, with three proposed MAPK cascades involved in cell wall integrity, osmoregulation, and mating/filamentation. Besides genomic evidence for degrading capability, both isolates also harbored an array of genes encoding stress response proteins that are potentially significant for adaptation to living in the hostile environments. In conclusion: Our genomic studies provide further information for the biological understanding of the D. eschscholtzii and suggest that these wood-decaying fungi are also equipped for adaptation to adverse environments in the human host.