The thermal evolution of Mercury's Fe-Si core

NASA Astrophysics Data System (ADS)

Knibbe, Jurriën Sebastiaan; van Westrenen, Wim

2018-01-01

We have studied the thermal and magnetic field evolution of planet Mercury with a core of Fe-Si alloy to assess whether an Fe-Si core matches its present-day partially molten state, Mercury's magnetic field strength, and the observed ancient crustal magnetization. The main advantages of an Fe-Si core, opposed to a previously assumed Fe-S core, are that a Si-bearing core is consistent with the highly reduced nature of Mercury and that no compositional convection is generated upon core solidification, in agreement with magnetic field indications of a stable layer at the top of Mercury's core. This study also present the first implementation of a conductive temperature profile in the core where heat fluxes are sub-adiabatic in a global thermal evolution model. We show that heat migrates from the deep core to the outer part of the core as soon as heat fluxes at the outer core become sub-adiabatic. As a result, the deep core cools throughout Mercury's evolution independent of the temperature evolution at the core-mantle boundary, causing an early start of inner core solidification and magnetic field generation. The conductive layer at the outer core suppresses the rate of core growth after temperature differences between the deep and shallow core are relaxed, such that a magnetic field can be generated until the present. Also, the outer core and mantle operate at higher temperatures than previously thought, which prolongs mantle melting and mantle convection. The results indicate that S is not a necessary ingredient of Mercury's core, bringing bulk compositional models of Mercury more in line with reduced meteorite analogues.

Evaluation of Cloud-resolving and Limited Area Model Intercomparison Simulations using TWP-ICE Observations. Part 1: Deep Convective Updraft Properties

DOE Office of Scientific and Technical Information (OSTI.GOV)

Varble, A. C.; Zipser, Edward J.; Fridlind, Ann

2014-12-27

Ten 3D cloud-resolving model (CRM) simulations and four 3D limited area model (LAM) simulations of an intense mesoscale convective system observed on January 23-24, 2006 during the Tropical Warm Pool – International Cloud Experiment (TWP-ICE) are compared with each other and with observed radar reflectivity fields and dual-Doppler retrievals of vertical wind speeds in an attempt to explain published results showing a high bias in simulated convective radar reflectivity aloft. This high bias results from ice water content being large, which is a product of large, strong convective updrafts, although hydrometeor size distribution assumptions modulate the size of this bias.more » Snow reflectivity can exceed 40 dBZ in a two-moment scheme when a constant bulk density of 100 kg m-3 is used. Making snow mass more realistically proportional to area rather than volume should somewhat alleviate this problem. Graupel, unlike snow, produces high biased reflectivity in all simulations. This is associated with large amounts of liquid water above the freezing level in updraft cores. Peak vertical velocities in deep convective updrafts are greater than dual-Doppler retrieved values, especially in the upper troposphere. Freezing of large rainwater contents lofted above the freezing level in simulated updraft cores greatly contributes to these excessive upper tropospheric vertical velocities. Strong simulated updraft cores are nearly undiluted, with some showing supercell characteristics. Decreasing horizontal grid spacing from 900 meters to 100 meters weakens strong updrafts, but not enough to match observational retrievals. Therefore, overly intense simulated updrafts may partly be a product of interactions between convective dynamics, parameterized microphysics, and large-scale environmental biases that promote different convective modes and strengths than observed.« less

Effects of Precipitation on Ocean Mixed-Layer Temperature and Salinity as Simulated in a 2-D Coupled Ocean-Cloud Resolving Atmosphere Model

NASA Technical Reports Server (NTRS)

Li, Xiaofan; Sui, C.-H.; Lau, K-M.; Adamec, D.

1999-01-01

A two-dimensional coupled ocean-cloud resolving atmosphere model is used to investigate possible roles of convective scale ocean disturbances induced by atmospheric precipitation on ocean mixed-layer heat and salt budgets. The model couples a cloud resolving model with an embedded mixed layer-ocean circulation model. Five experiment are performed under imposed large-scale atmospheric forcing in terms of vertical velocity derived from the TOGA COARE observations during a selected seven-day period. The dominant variability of mixed-layer temperature and salinity are simulated by the coupled model with imposed large-scale forcing. The mixed-layer temperatures in the coupled experiments with 1-D and 2-D ocean models show similar variations when salinity effects are not included. When salinity effects are included, however, differences in the domain-mean mixed-layer salinity and temperature between coupled experiments with 1-D and 2-D ocean models could be as large as 0.3 PSU and 0.4 C respectively. Without fresh water effects, the nocturnal heat loss over ocean surface causes deep mixed layers and weak cooling rates so that the nocturnal mixed-layer temperatures tend to be horizontally-uniform. The fresh water flux, however, causes shallow mixed layers over convective areas while the nocturnal heat loss causes deep mixed layer over convection-free areas so that the mixed-layer temperatures have large horizontal fluctuations. Furthermore, fresh water flux exhibits larger spatial fluctuations than surface heat flux because heavy rainfall occurs over convective areas embedded in broad non-convective or clear areas, whereas diurnal signals over whole model areas yield high spatial correlation of surface heat flux. As a result, mixed-layer salinities contribute more to the density differences than do mixed-layer temperatures.

Validation of a high-power, time-resolved, near-infrared spectroscopy system for measurement of superficial and deep muscle deoxygenation during exercise.

PubMed

Koga, Shunsaku; Barstow, Thomas J; Okushima, Dai; Rossiter, Harry B; Kondo, Narihiko; Ohmae, Etsuko; Poole, David C

2015-06-01

Near-infrared assessment of skeletal muscle is restricted to superficial tissues due to power limitations of spectroscopic systems. We reasoned that understanding of muscle deoxygenation may be improved by simultaneously interrogating deeper tissues. To achieve this, we modified a high-power (∼8 mW), time-resolved, near-infrared spectroscopy system to increase depth penetration. Precision was first validated using a homogenous optical phantom over a range of inter-optode spacings (OS). Coefficients of variation from 10 measurements were minimal (0.5-1.9%) for absorption (μa), reduced scattering, simulated total hemoglobin, and simulated O2 saturation. Second, a dual-layer phantom was constructed to assess depth sensitivity, and the thickness of the superficial layer was varied. With a superficial layer thickness of 1, 2, 3, and 4 cm (μa = 0.149 cm(-1)), the proportional contribution of the deep layer (μa = 0.250 cm(-1)) to total μa was 80.1, 26.9, 3.7, and 0.0%, respectively (at 6-cm OS), validating penetration to ∼3 cm. Implementation of an additional superficial phantom to simulate adipose tissue further reduced depth sensitivity. Finally, superficial and deep muscle spectroscopy was performed in six participants during heavy-intensity cycle exercise. Compared with the superficial rectus femoris, peak deoxygenation of the deep rectus femoris (including the superficial intermedius in some) was not significantly different (deoxyhemoglobin and deoxymyoglobin concentration: 81.3 ± 20.8 vs. 78.3 ± 13.6 μM, P > 0.05), but deoxygenation kinetics were significantly slower (mean response time: 37 ± 10 vs. 65 ± 9 s, P ≤ 0.05). These data validate a high-power, time-resolved, near-infrared spectroscopy system with large OS for measuring the deoxygenation of deep tissues and reveal temporal and spatial disparities in muscle deoxygenation responses to exercise. Copyright © 2015 the American Physiological Society.

Initial results from geophysical surveys and shallow coring of the Northeast Greenland Ice Stream (NEGIS)

NASA Astrophysics Data System (ADS)

Vallelonga, P.; Christianson, K.; Alley, R. B.; Anandakrishnan, S.; Christian, J. E. M.; Dahl-Jensen, D.; Gkinis, V.; Holme, C.; Jacobel, R. W.; Karlsson, N.; Keisling, B. A.; Kipfstuhl, S.; Kjær, H. A.; Kristensen, M. E. L.; Muto, A.; Peters, L. E.; Popp, T.; Riverman, K. L.; Svensson, A. M.; Tibuleac, C.; Vinther, B. M.; Weng, Y.; Winstrup, M.

2014-01-01

The Northeast Greenland Ice Stream (NEGIS) is the sole interior Greenlandic ice stream. Fast flow initiates near the summit dome, and the ice stream terminates approximately 1000 km downstream in three large outlet glaciers that calve into the Greenland Sea. To better understand this important system, in the summer of 2012 we drilled a 67 m firn core and conducted ground-based radio-echo sounding (RES) and active-source seismic surveys at a site approximately 150 km downstream from the onset of streaming flow (NEGIS firn core, 75° 37.61' N, 35°56.49' W). The site is representative of the upper part of the ice stream, while also being in a crevasse-free area for safe surface operations. Annual cycles were observed for insoluble dust, sodium and ammonium concentrations and for electrolytic conductivity, allowing a seasonally resolved chronology covering the past 400 yr. Annual layer thicknesses averaged 0.11 m ice equivalent (i.e.) for the period 1607-2011, although accumulation varied between 0.08 and 0.14 m i.e., likely due to flow-related changes in surface topography. Tracing of RES layers from the NGRIP ice core site shows that the ice at NEGIS preserves a climatic record of at least the past 51 kyr. We demonstrate that a deep ice core drilling in this location can provide a reliable Holocene and late-glacial climate record, as well as helping to constrain the past dynamics and ice-lithosphere interactions of the Greenland Ice Sheet.

Are annual layers preserved in NorthGRIP Eemian ice?

NASA Astrophysics Data System (ADS)

Kettner, E.; Bigler, M.; Nielsen, M. E.; Steffensen, J. P.; Svensson, A.

2009-04-01

A newly developed setup for continuous flow analysis (CFA) of ice cores in Copenhagen is optimized for high resolution analysis of four components: Soluble sodium (mainly deriving from sea salt), soluble ammonium (related to biological processes and biomass burning events), insoluble dust particles (basically transported from Asian deserts to Greenland), and the electrolytic melt water conductivity (which is a bulk signal for all ionic constituents). Furthermore, we are for the first time implementing a flow cytometer to obtain high quality dust concentration and size distribution profiles based on individual dust particle measurements. Preliminary measurements show that the setup is able to resolve annual layers of 1 cm thickness. Ice flow models predict that annual layers in the Eemian section of the Greenland NorthGRIP ice core (130-115 ka BP) have a thickness of around 1 cm. However, the visual stratigraphy of the ice core indicates that the annual layering in the Eemian section may be disturbed by micro folds and rapid crystal growth. In this case study we will measure the impurity content of an Eemian segment of the NorthGRIP ice core with the new CFA setup. This will allow for a comparison to well-known impurity levels of the Holocene in both Greenland and Antarctic ice and we will attempt to determine if annual layers are still present in the ice.

Mechanisms of diurnal precipitation over the US Great Plains: a cloud resolving model perspective

NASA Astrophysics Data System (ADS)

Lee, Myong-In; Choi, Ildae; Tao, Wei-Kuo; Schubert, Siegfried D.; Kang, In-Sik

2010-02-01

The mechanisms of summertime diurnal precipitation in the US Great Plains were examined with the two-dimensional (2D) Goddard Cumulus Ensemble (GCE) cloud-resolving model (CRM). The model was constrained by the observed large-scale background state and surface flux derived from the Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Program’s Intensive Observing Period (IOP) data at the Southern Great Plains (SGP). The model, when continuously-forced by realistic surface flux and large-scale advection, simulates reasonably well the temporal evolution of the observed rainfall episodes, particularly for the strongly forced precipitation events. However, the model exhibits a deficiency for the weakly forced events driven by diurnal convection. Additional tests were run with the GCE model in order to discriminate between the mechanisms that determine daytime and nighttime convection. In these tests, the model was constrained with the same repeating diurnal variation in the large-scale advection and/or surface flux. The results indicate that it is primarily the surface heat and moisture flux that is responsible for the development of deep convection in the afternoon, whereas the large-scale upward motion and associated moisture advection play an important role in preconditioning nocturnal convection. In the nighttime, high clouds are continuously built up through their interaction and feedback with long-wave radiation, eventually initiating deep convection from the boundary layer. Without these upper-level destabilization processes, the model tends to produce only daytime convection in response to boundary layer heating. This study suggests that the correct simulation of the diurnal variation in precipitation requires that the free-atmospheric destabilization mechanisms resolved in the CRM simulation must be adequately parameterized in current general circulation models (GCMs) many of which are overly sensitive to the parameterized boundary layer heating.

Mechanisms of Diurnal Precipitation over the United States Great Plains: A Cloud-Resolving Model Simulation

NASA Technical Reports Server (NTRS)

Lee, M.-I.; Choi, I.; Tao, W.-K.; Schubert, S. D.; Kang, I.-K.

2010-01-01

The mechanisms of summertime diurnal precipitation in the US Great Plains were examined with the two-dimensional (2D) Goddard Cumulus Ensemble (GCE) cloud-resolving model (CRM). The model was constrained by the observed large-scale background state and surface flux derived from the Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Program s Intensive Observing Period (IOP) data at the Southern Great Plains (SGP). The model, when continuously-forced by realistic surface flux and large-scale advection, simulates reasonably well the temporal evolution of the observed rainfall episodes, particularly for the strongly forced precipitation events. However, the model exhibits a deficiency for the weakly forced events driven by diurnal convection. Additional tests were run with the GCE model in order to discriminate between the mechanisms that determine daytime and nighttime convection. In these tests, the model was constrained with the same repeating diurnal variation in the large-scale advection and/or surface flux. The results indicate that it is primarily the surface heat and moisture flux that is responsible for the development of deep convection in the afternoon, whereas the large-scale upward motion and associated moisture advection play an important role in preconditioning nocturnal convection. In the nighttime, high clouds are continuously built up through their interaction and feedback with long-wave radiation, eventually initiating deep convection from the boundary layer. Without these upper-level destabilization processes, the model tends to produce only daytime convection in response to boundary layer heating. This study suggests that the correct simulation of the diurnal variation in precipitation requires that the free-atmospheric destabilization mechanisms resolved in the CRM simulation must be adequately parameterized in current general circulation models (GCMs) many of which are overly sensitive to the parameterized boundary layer heating.

Paracentral acute middle maculopathy in nonischemic central retinal vein occlusion.

PubMed

Rahimy, Ehsan; Sarraf, David; Dollin, Michael L; Pitcher, John D; Ho, Allen C

2014-08-01

To better characterize a novel spectral-domain optical coherence tomography (OCT) presentation, termed paracentral acute middle maculopathy, to describe this finding in patients with nonischemic central retinal vein occlusion (CRVO), and to support a proposed pathogenesis of intermediate and deep retinal capillary ischemia. Retrospective observational case series. Clinical histories, high-resolution digital color imaging, red-free photography, fluorescein angiography, near-infrared reflectance, and spectral-domain OCT images of 484 patients with acute CRVO from 2 centers were evaluated for the presence of coexisting paracentral acute middle maculopathy. Of 484 patients diagnosed with CRVO, 25 (5.2%) demonstrated evidence of concurrent paracentral acute middle maculopathy. Patients averaged 51 years of age and presented with complaints of paracentral scotomas. All patients demonstrated hyper-reflective plaquelike lesions at the level of the inner nuclear layer by spectral-domain OCT and showed corresponding dark-gray lesions on near-infrared reflectance and perivenular deep retinal whitening on color fundus photography. There was no fluorescein angiographic correlate to these lesions. On follow-up spectral-domain OCT imaging, the lesions had resolved into areas of inner nuclear layer atrophy with persistence of scotomas. Paracentral acute middle maculopathy refers to characteristic hyper-reflective spectral-domain OCT lesions involving the middle layers of the retina at the level of the inner nuclear layer that may develop in response to ischemia of the intermediate and deep capillary plexuses. This series is the largest to describe this spectral-domain OCT finding to date, and it is the first to associate it with nonischemic CRVO. Copyright © 2014 Elsevier Inc. All rights reserved.

Deconvolution improves the accuracy and depth sensitivity of time-resolved measurements

NASA Astrophysics Data System (ADS)

Diop, Mamadou; St. Lawrence, Keith

2013-03-01

Time-resolved (TR) techniques have the potential to distinguish early- from late-arriving photons. Since light travelling through superficial tissue is detected earlier than photons that penetrate the deeper layers, time-windowing can in principle be used to improve the depth sensitivity of TR measurements. However, TR measurements also contain instrument contributions - referred to as the instrument-response-function (IRF) - which cause temporal broadening of the measured temporal-point-spread-function (TPSF). In this report, we investigate the influence of the IRF on pathlength-resolved absorption changes (Δμa) retrieved from TR measurements using the microscopic Beer-Lambert law (MBLL). TPSFs were acquired on homogeneous and two-layer tissue-mimicking phantoms with varying optical properties. The measured IRF and TPSFs were deconvolved to recover the distribution of time-of-flights (DTOFs) of the detected photons. The microscopic Beer-Lambert law was applied to early and late time-windows of the TPSFs and DTOFs to access the effects of the IRF on pathlength-resolved Δμa. The analysis showed that the late part of the TPSFs contains substantial contributions from early-arriving photons, due to the smearing effects of the IRF, which reduced its sensitivity to absorption changes occurring in deep layers. We also demonstrated that the effects of the IRF can be efficiently eliminated by applying a robust deconvolution technique, thereby improving the accuracy and sensitivity of TR measurements to deep-tissue absorption changes.

Hydrodynamic stability and Ti-tracer distribution in low-adiabat OMEGA direct-drive implosions

NASA Astrophysics Data System (ADS)

Joshi, Tirtha R.

We discuss the hydrodynamic stability of low-adiabat OMEGA direct-drive implosions based on results obtained from simultaneous emission and absorption spectroscopy of a titanium tracer added to the target. The targets were deuterium filled, warm plastic shells of varying thicknesses and filling gas pressures with a submicron Ti-doped tracer layer initially located on the inner surface of the shell. The spectral features from the titanium tracer are observed during the deceleration and stagnation phases of the implosion, and recorded with a time integrated spectrometer (XRS1), streaked crystal spectrometer (SSCA) and three gated, multi-monochromatic X-ray imager (MMI) instruments fielded along quasi-orthogonal lines-of-sight. The time-integrated, streaked and gated data show simultaneous emission and absorption spectral features associated with titanium K-shell line transitions but only the MMI data provides spatially resolved information. The arrays of gated spectrally resolved images recorded with MMI were processed to obtain spatially resolved spectra characteristic of annular contour regions on the image. A multi-zone spectroscopic analysis of the annular spatially resolved spectra permits the extraction of plasma conditions in the core as well as the spatial distribution of tracer atoms. In turn, the titanium atom distribution provides direct evidence of tracer penetration into the core and thus of the hydrodynamic stability of the shell. The observations, timing and analysis indicate that during fuel burning the titanium atoms have migrated deep into the core and thus shell material mixing is likely to impact the rate of nuclear fusion reactions, i.e. burning rate, and the neutron yield of the implosion. We have found that the Ti atom number density decreases towards the center in early deceleration phase, but later in time the trend is just opposite, i.e., it increases towards the center of the implosion core. This is in part a consequence of the convergent effect of spherical geometry. The spatial profiles of Ti areal densities in the implosion core are extracted from space-resolved spectra and also evaluated using 1D spherical scaling. The trends are similar to the Ti number density spatial profiles. The areal densities extracted from data and 1D spherical scaling are very comparable in the outer spherical zones of the implosion core but significantly deviate in the innermost zone. We have observed that approximately 85% of the Ti atoms migrate into the hot core, while 15% of the atoms are still on the shell-fuel interface and contributing to the absorption. In addition, a method to extract the hot spot size based on the formation of the absorption feature in a sequence of annular spectra will be discussed. Results and trends are discussed as a function of target shell thickness and filling pressure, and laser pulse shape.

Voxel-based measurement sensitivity of spatially resolved near-infrared spectroscopy in layered tissues

NASA Astrophysics Data System (ADS)

Niwayama, Masatsugu

2018-03-01

We quantitatively investigated the measurement sensitivity of spatially resolved spectroscopy (SRS) across six tissue models: cerebral tissue, a small animal brain, the forehead of a fetus, an adult brain, forearm muscle, and thigh muscle. The optical path length in the voxel of the model was analyzed using Monte Carlo simulations. It was found that the measurement sensitivity can be represented as the product of the change in the absorption coefficient and the difference in optical path length in two states with different source-detector distances. The results clarified the sensitivity ratio between the surface layer and the deep layer at each source-detector distance for each model and identified changes in the deep measurement area when one of the detectors was close to the light source. A comparison was made with the results from continuous-wave spectroscopy. The study also identified measurement challenges that arise when the surface layer is inhomogeneous. Findings on the measurement sensitivity of SRS at each voxel and in each layer can support the correct interpretation of measured values when near-infrared oximetry or functional near-infrared spectroscopy is used to investigate different tissue structures.

Chemical gradients in sediment cores from an EPA reference site off the Farallon Islands - Assessing chemical indicators of dredged material disposal in the deep sea

USGS Publications Warehouse

Bothner, Michael H.; Gill, P.W.; Boothman, W.S.; Taylor, B.B.; Karl, Herman A.

1998-01-01

Heavy metal and organic contaminants have been determined in undisturbed sediment cores from the US Environmental Protection Agency reference site for dredged material on the continental slope off San Francisco. As expected, the concentrations are significantly lower than toxic effects guidelines, but concentrations of PCBs, PAHs, Hg, Pb, and Clostridium perfringens (a bacterium spore found in sewage) were nearly two or more times greater in the surface sediments than in intervals deeper in the cores. These observations indicate the usefulness of measuring concentration gradients in sediments at the San Francisco deep ocean disposal site (SF-DODS) where a thin (0.5 cm thick) layer of dredged material has been observed beyond the boundary. This thin layer has not been chemically characterized by the common practice of homogenizing over the top 10 cm. An estimated 300 million cubic yards of dredged material from San Francisco Bay are expected to be discharged at the SF-DODS site during the next 50 years. Detailed depth analysis of sediment cores would add significant new information about the fate and effects of dredged material in the deep sea.

The Importance of Three Physical Processes in a Minimal Three-Dimensional Tropical Cyclone Model.

NASA Astrophysics Data System (ADS)

Zhu, Hongyan; Smith, Roger K.

2002-06-01

The minimal three-dimensional tropical cyclone model developed by Zhu et al. is used to explore the role of shallow convection, precipitation-cooled downdrafts, and the vertical transport of momentum by deep convection on the dynamics of tropical cyclone intensification. The model is formulated in coordinates and has three vertical levels, one characterizing a shallow boundary layer, and the other two representing the upper and lower troposphere, respectively. It has three options for treating cumulus convection on the subgrid scale and a simple scheme for the explicit release of latent heat on the grid scale.In the model, as in reality, shallow convection transports air with low moist static energy from the lower troposphere to the boundary layer, stabilizing the atmosphere not only to itself, but also to deep convection. Also it moistens and cools the lower troposphere. For realistic parameter values, the stabilization in the vortex core region is the primary effect: it reduces the deep convective mass flux and therefore the rate of heating and drying in the troposphere. This reduced heating, together with the direct cooling of the lower troposphere by shallow convection, diminishes the buoyancy in the vortex core and thereby the vortex intensification rate.The effects of precipitation-cooled downdrafts depend on the closure scheme chosen for deep convection. In the two closures in which the deep cloud mass flux depends on the degree of convective instability, the downdrafts do not change the total mass flux of air that subsides into the boundary layer, but they carry air with a lower moist static energy into this layer than does subsidence outside downdrafts. As a result they decrease the rate of intensification during the early development stage. Nevertheless, by reducing the deep convective mass flux and the drying effect of compensating subsidence, they enable grid scale saturation, and therefore rapid intensification, to occur earlier than in calculations where they are excluded. In the closure in which the deep cloud mass flux depends on the mass convergence in the boundary layer, downdrafts reduce the gestation period and increase the intensification rate.Convective momentum transport as represented in the model weakens both the primary and secondary circulations of the vortex. However, it does not significantly reduce the maximum intensity attained after the period of rapid development. The weakening of the secondary circulation impedes vortex development and significantly prolongs the gestation period.Where possible the results are compared with those found in other studies.

Asteroseismology of Red-Giant Stars: Mixed Modes, Differential Rotation, and Eccentric Binaries

NASA Astrophysics Data System (ADS)

Beck, Paul G.

2013-12-01

Astronomers are aware of rotation in stars since Galileo Galilei attributed the movement of sunspots to rotation of the Sun in 1613. In contrast to the Sun, whose surface can be resolved by small telescopes or even the (protected) eye, we detect stars as point sources with no spatial information. Numerous techniques have been developed to derive information about stellar rotation. Unfortunately, most observational data allow only for the surface rotational rate to be inferred. The internal rotational profile, which has a great effect on the stellar structure and evolution, remains hidden below the top layers of the star - the essential is hidden to the eyes. Asteroseismology allows us to "sense" indirectly deep below the stellar surface. Oscillations that propagate through the star provide information about the deep stellar interiors while they also distort the stellar surface in characteristic patterns leading to detectable brightness or velocity variations. Also, certain oscillation modes are sensitive to internal rotation and carry information on how the star is spinning deep inside. Thanks to the unprecedented quality of NASA's space telescope Kepler, numerous detailed observations of stars in various evolutionary stages are available. Such high quality data allow that for many stars, rotation can not only be constrained from surface rotation, but also investigated through seismic studies. The work presented in this thesis focuses on the oscillations and internal rotational gradient of evolved single and binary stars. It is shown that the seismic analysis can reach the cores of oscillating red-giant stars and that these cores are rapidly rotating, while nested in a slowly rotating convective envelope.

A numerical modeling study of the physical mechanisms causing radiation to promote the genesis of a tropical cyclone

NASA Astrophysics Data System (ADS)

Nicholls, M.; Pielke, R., Sr.; Smith, W. H.; Saleeby, S. M.; Wood, N.

2016-12-01

Several cloud-resolving numerical modeling results indicate that radiative forcing significantly accelerates tropical cyclogenesis. The primary mechanism appears to be differential radiative forcing between a relatively cloud-free environment and a developing tropical disturbance that generates circulations that influence convective activity in the core of the system, a mechanism first suggested by Gray and Jacobson. A dynamical perspective of this mechanism is taken by viewing it in terms of the lateral propagation of thermally driven gravity wave circulations. Numerical model experiments indicate that as an expansive stratiform cloud layer forms aloft the long wave cooling is reduced at low and mid levels. During the daytime there is not a very large differential radiative forcing between the environment and the cloud system, but it becomes significant at night when there is strong radiative clear sky cooling of the environment. Thermally driven circulations, are induced characterized by relatively weak subsidence in the environment but considerably stronger upward motion in the system core. This leads to a cooling tendency and increased relative humidity at night which appears to be a major factor in enhancing convective activity thereby leading in the mean to an increased rate of genesis. The increased upward motion and relative humidity that occurs throughout a deep layer is likely to aid in the triggering of convection, and provide a more favorable local environment at mid-levels for maintenance of buoyancy in convective cells due to a reduction of the detrimental effects of dry air entrainment. In order to clarify the effects of radiation the radiative forcing occurring in a fully physics simulation is imposed as a forcing term on the thermodynamic equation in a simulation without microphysics or radiation included to examine the induced circulations and the resultant thermodynamic changes that can influence convective development.

Modeling the Internal Structure of Mars Using Normal Mode Relaxation Theory

NASA Astrophysics Data System (ADS)

Pithawala, T. M.; Ghent, R. R.; Bills, B. G.

2010-12-01

We seek to resolve an apparent paradox between two sets of observations, which seem to suggest quite different thermal structures for the deep interior of Mars. The orbit of Phobos is observed to be accelerating along-track at a rate of (273.4 ± 1.2) 10^(-5) deg/yr^(2), which implies that the orbit is shrinking at (4.03 ± 0.03) cm/yr, and losing energy at a rate of 3.4 MW. The most likely sink for that energy is tidal dissipation within Mars, seemingly requiring a warm interior. However, static support of the gravity and topography of Mars requires a thick elastic lithosphere, indicating a relatively cool (and therefore stiff) mantle. Using normal mode relaxation theory we model the internal viscosity structure of Mars by analyzing its response to tidal forcing from Phobos. We investigate spherical axisymmetric layered viscoelastic models, seeking to satisfy what is known about planetary differentiation, to support large-scale topography via a thick elastic lithosphere, and to yield the observed tidal dissipation rate. We present a family of 4-layer models (core, mantle, lithosphere, and thin weak layer) that satisfy these constraints, and discuss the implications for Mars’ internal structure.

High resolution photoemission investigation: The oxidation of W

NASA Astrophysics Data System (ADS)

Morar, J. F.; Himpsel, F. J.; Hughes, G. J.; Jordan, J. L.; McFeely, F. R.; Hollinge, G.

High resolution photoemission measurements of surface oxide layers on tungsten has revealed a set of well resolved core level shifts characteristic of individual metal oxidation states. Measurement and analysis of this type of data can provide specific and quantitative chemical information about surface oxides. The formation of bonds between transition metals and strongly electronegative elements such as oxygen and fluorine results in charge transfer with the effect of shifting the metal core electron binding energies. The magnitude of such shifts depends primarily on two factors; the amount of charge transfer and the screening ability of the metals electrons. The size of core-level shifts tend to increase with additional charge transfer and be decreased by screening. In the case of tungsten the amount of screening should be a function of oxygen content since the oxygen ties up free electrons which are effective at screening. A continuous change in the tungsten core level shifts is observed with increasing oxygen content, i.e., as the screening changes from that characteristic of a metal screened to that characteristic of an insulator unscreened.

Effect of Ion Sputtering on Interface Chemistry and Electrical Properties of an Gaas (100) Schottky Contacts

NASA Technical Reports Server (NTRS)

Wang, Y. X.; Holloway, P. H.

1984-01-01

Auger and electron photoelectron spectroscopy were used to measure the extent of As depletion during 1 keV to 5 keV argon sputtering of GaAs surfaces. This depletion was correlated with a general decrease in the barrier height of the rectifying Au contact deposited in situ. However, nondestructive angle resolved XPS measurements showed As was depleted at the outer surface more by 1 keV than 3 keV argon. These effects are explained based on a combined work effective work function model and creation of a donor like surface damage layer. The donor layer was correlated with As depletion by sputtering. Deep level trap formation and annealing of sputtering effects were studied.

A two-pronged approach to detecting ICB Stoneley modes

NASA Astrophysics Data System (ADS)

Jasperson, H. A.; Ye, J.; Shi, J.; De Hoop, M. V.

2017-12-01

Stoneley modes are special kinds of normal modes that are confined to the boundary between a fluid layer and a solid layer inside the Earth. Thus, these modes theoretically occur at the core-mantle boundary (CMB) and inner core boundary (ICB). CMB Stoneley modes were identified in observational data by Koelemeijer, et al. in 2013, but ICB Stoneley modes have remained relatively unexplored. Here we use a joint numerical and data-driven approach to identify ICB Stoneley modes from the deep 2013 Mw 8.3 Sea of Okhotsk earthquake. For the data-driven portion, we use 50 stacked traces from the USArray to identify potential occurrences of ICB Stoneley modes. Next, we verify each occurrence by comparing the spectrum to its equivalent from the shallow 2011 Mw 9.1 Tohoku earthquake. We also develop a novel computational approach to compute normal modes in a spherically symmetric non-rotating Earth building on the work of Wiggins (1976) and Buland and Gilbert (1984). We successfully resolve the clustering eigenvalue problem with non-orthogonal eigenfunctions from which Mineos suffers. By choosing the displacement/pressure formulation in the fluid outer core and handling boundary conditions properly, we remarkably project out the essential spectrum and provide the correct point spectrum. The utilization of weak variational form to perform the Rayleigh-Ritz procedure contributes to preserving the high accuracy across the solid-fluid boundary, which makes it possible to capture Stoneley modes' exponentially decaying behavior across the solid-fluid boundary, leading to more accurate and reliable eigenvalues and eigenfunctions. This allows us to compare the observation data and numerical computations. With this approach, we eliminate false signals from consideration, leaving only true ICB Stoneley mode peaks. In the future, information from these modes can be used to study the properties of the ICB and inner core.

Distal deltaic deposits document hydrological variability during the past 30 kyrBP in Lake Towuti, Indonesia

NASA Astrophysics Data System (ADS)

Vogel, Hendrik; Russell, James M.; Yudawati Cahyarini, Sri; Bijaksana, Satria; Wattrus, Nigel; Rethemeyer, Janet; Melles, Martin

2014-05-01

Lake Towuti (2.75°S, 121.5°E; 318 m a.s.l.) is a, 560 km2, 200-m deep tectonic lake at the downstream end of the Malili lake system, a set of five, ancient (1-2 MYr) tectonic lakes in central Sulawesi, Indonesia. The Mahalona River constitutes the largest tributary and connects Lake Towuti with the two upstream lakes Matano and Mahalona. The Mahalona River Delta is prograding into the >200m deep northern basin of Lake Towuti. Tracing past variability of Mahalona River discharge is therefore an important puzzle piece for the understanding of depositional dynamics in Lake Towuti as well as catchment hydrology and hydrological connectivity between the Malili Lakes. Distal deltaic deposits can help identifying past variability in river discharge and delta dynamics. Using highly resolved seismic reflection data collected between 2007-2013 we identified a stack of acoustically laminated reflections in Towuti's extensive and morphologically flat deep northern basin. For detailed characterization of these acoustic features we collected a c. 20m long piston core from the basin centre at 200 m water depth reaching back to c. 30 kyrBP. Sediments in this piston core consist to 75% of mass wasting deposits (MWD) of variable thickness that are intercalated with pelagic muds (25%). MWD appear mostly homogenous (silt- to finesand-sized siliciclastics with high amounts of terrestrial plant macrofossils) with only thin (1-3 cm) basal sand layers and clay caps (<1 cm). Pelagic muds appear as thin to medium bedded slightly silty clays that are clearly distinguishable from MWD. The position of MWD identified in our piston core nicely correlates with acoustically laminated reflections identified in seismic profiles crossing the coring site. Based on these combined sedimentological and acoustic datasets we interpret MWD in Towuti's northern basin as distal deltaic deposits originating from the Mahalona River Delta. Frequencies and percentages (in terms of lithofacies contribution) of distal deltaic deposits differ substantially between the Holocene (56%) and last glacial (88%) sediment succession. In combination with data from hydrological proxies and seismic reflection data indicating dry climate conditions and lake level lowstands, respectively, we interpret the higher frequency of distal deltaic deposits during the last glacial as a result of subaerial exposure and erosion of Mahalona River Delta sediments. These findings imply that frequencies and percentages of distal deltaic deposits in Lake Towuti may be an additional indicator for hydrological variability in this particular system.

Benthic foraminiferal faunal and geochemical proxies as tracers for paleoenvironmental and paleoceanographic changes in the western Mediterranean over the last 24 ka

NASA Astrophysics Data System (ADS)

Pérez-Asensio, José N.; Cacho, Isabel; Frigola, Jaime; Pena, Leopoldo D.; Sierro, Francisco J.; Asioli, Alessandra; Kuhlmann, Jannis; Huhn, Katrin

2017-04-01

Paleoenvironmental and paleoceanographic changes in the western Mediterranean are reconstructed for the last 24 ka using a combination of benthic foraminiferal assemblages and geochemical proxies measured on benthic foraminiferal shells (Mg/Ca-deep water temperatures and stable isotopes). The studied materials are sediment cores HER-GC-UB06 and MD95-2043recovered at 946 m and 1841 m, respectively, from the Alboran Sea. At present, both core sites are bathed by the Western Mediterranean Deep Water (WMDW), although UB06 core is close to the boundary with the overlying Levantine Intermediate Water (LIW). Therefore, past variability of both water masses can potentially be recorded by the benthic foraminiferal proxies from the studied sites. Benthic foraminiferal assemblages and geochemical data show fluctuations in bottom-water ventilation, organic matter accumulation and deep-water temperatures related to WMDW and LIW circulation. During the glacial interval, an alternation of events showing better ventilation (higher abundance of Cibicides pachyderma) with lower temperatures and events of warmer deep water temperatures with poorer ventilation (Nonionella iridea assemblage, lower abundance of C. pachyderma) are observed. This variability might reflect stronger WMDW formation during the Last Glacial Maximum (LGM) and Heinrich Stadial 1. During the Bølling-Allerød and Younger Dryas (YD) periods, cold temperatures and the lowest oxygenation rates are recorded coinciding with the highest abundance of deep infaunal taxa on both UB06 and MD95-2043 cores. This interval was coetaneous to the deposition of an Organic Rich Layer in the Alboran Sea. However, a re-ventilation trend started at the end of the YD in the shallower site (UB06 core) whereas low-oxygen conditions prevailed until the end of the early Holocene in the deep site (MD95-2043 core). During the early Holocene a significant deep water temperature increase occurred at the shallower site suggesting the replacement of WMDW by warmer water mass, likely LIW. In the middle Holocene, highly variable bottom-water oxygenation and temperatures are observed showing warmer deep waters with less oxygen content (higher deep and intermediate infaunal abundances). The late Holocene (last 4 ka) was characterized by slightly cooler deep water temperatures and enhanced oxygen levels supporting that WMDW became dominant at the shallower site. These observations reveal that Mediterranean thermohaline system has been highly variable during the studied period supporting its high sensitivity to changing climate conditions. These results open a new insight into the Mediterranean sensitivity to Holocene climate variability.

Imaging the Moon's Core with Seismology

NASA Technical Reports Server (NTRS)

Weber, Renee C.; Lin, Pei-Ying Patty; Garnero, Ed J.; Williams, Quetin C.; Lognonne, Philippe

2011-01-01

Constraining the structure of the lunar core is necessary to improve our understanding of the present-day thermal structure of the interior and the history of a lunar dynamo, as well as the origin and thermal and compositional evolution of the Moon. We analyze Apollo deep moonquake seismograms using terrestrial array processing methods to search for the presence of reflected and converted energy from the lunar core. Although moonquake fault parameters are not constrained, we first explore a suite of theoretical focal spheres to verify that fault planes exist that can produce favorable core reflection amplitudes relative to direct up-going energy at the Apollo stations. Beginning with stacks of event seismograms from the known distribution of deep moonquake clusters, we apply a polarization filter to account for the effects of seismic scattering that (a) partitions energy away from expected components of ground motion, and (b) obscures all but the main P- and S-wave arrivals. The filtered traces are then shifted to the predicted arrival time of a core phase (e.g. PcP) and stacked to enhance subtle arrivals associated with the Moon s core. This combination of filtering and array processing is well suited for detecting deep lunar seismic reflections, since we do not expect scattered wave energy from near surface (or deeper) structure recorded at varying epicentral distances and stations from varying moonquakes at varying depths to stack coherently. Our results indicate the presence of a solid inner and fluid outer core, overlain by a partial-melt-containing boundary layer (Table 1). These layers are consistently observed among stacks from four classes of reflections: P-to-P, S-to-P, P-to-S, and S-to-S, and are consistent with current indirect geophysical estimates of core and deep mantle properties, including mass, moment of inertia, lunar laser ranging, and electromagnetic induction. Future refinements are expected following the successful launch of the GRAIL lunar orbiter and SELENE 2 lunar lander missions.

Deep Learning and Developmental Learning: Emergence of Fine-to-Coarse Conceptual Categories at Layers of Deep Belief Network.

PubMed

Sadeghi, Zahra

2016-09-01

In this paper, I investigate conceptual categories derived from developmental processing in a deep neural network. The similarity matrices of deep representation at each layer of neural network are computed and compared with their raw representation. While the clusters generated by raw representation stand at the basic level of abstraction, conceptual categories obtained from deep representation shows a bottom-up transition procedure. Results demonstrate a developmental course of learning from specific to general level of abstraction through learned layers of representations in a deep belief network. © The Author(s) 2016.

Vertical wind shear characteristics that promote supercell-to-MCS transitions

NASA Astrophysics Data System (ADS)

Peters, J. M.

2017-12-01

What causes supercells to transition into MCSs in some situations, but not others? To explore this question, I first examined observed environmental characteristics of supercell events when MCSs formed, and compared them to the analogous environmental characteristics of supercell events when MCSs did not form. During events when MCS growth occurred, 0-1 km (low-level) vertical wind shear was stronger and 0-10 km (deep-layer) vertical wind shear was weaker than the wind shear during events when MCS growth did not occur. Next, I used idealized simulations of supercell thunderstorms to understand the connections between low-level and deep-layer shear and MCS growth. Compared to simulations with strong deep-layer shear, the simulations with weak deep-layer shear had rain in the storm's forward-flank downdraft (FFD) that fell closer to the updraft, fell through storm-moistened air and evaporated less, and produced a more intense FFD. Compared to simulations with weak low-level shear, the simulations with stronger low-level shear showed enhanced northward low-level hydrometeor transport into the FFD. Environments with strong low-level shear and weak deep-layer shear therefore conspired to produce a storm with a more intense FFD cold pool, when compared to environments with weak low-level shear and/or strong deep-layer shear. This strong FFD periodically disrupted the supercells' mesocyclones, and favorably interacted with westerly wind shear to produce widespread linear convection initiation, which drove MCS growth. These results suggest that increasing low-level wind shear after dark - while commonly assumed to enhance tornado potential - may in fact drive MCS growth and reduce tornado potential, unless it is combined with sufficiently strong deep layer shear.

Role of Deep Convection in Establishing the Isotopic Composition of Water Vapor in the Tropical Transition Layer

NASA Technical Reports Server (NTRS)

Smith, Jamison A.; Ackerman, Andrew S.; Jensen, Eric J.; Toon, Owen B.

2006-01-01

The transport of H2O and HDO within deep convection is investigated with 3-D large eddy simulations (LES) using bin microphysics. The lofting and sublimation of HDO-rich ice invalidate the Rayleigh fractionation model of isotopologue distribution within deep convection. Bootstrapping the correlation of the ratio of HDO to H2O (deltaD) to water vapor mixing ratio (q(sub v)) through a sequence of convective events produced non-Rayleigh correlations resembling observations. These results support two mechanisms for stratospheric entry. Deep convection can inject air with water vapor of stratospheric character directly into the tropical transition layer (TTL). Alternatively, moister air detraining from convection may be dehydrated via cirrus formation n the TTL to produce stratospheric water vapor. Significant production of subsaturated air in the TTL via convective dehydration is not observed in these simulations, nor is it necessary to resolve the stratospheric isotope paradox.

Introduction to Phase-Resolving Wave Modeling with FUNWAVE

DTIC Science & Technology

2015-07-01

Boussinesq wave models have become a useful tool for modeling surface wave transformation from deep water to the swash zone, as well as wave-induced...overlapping area of ghost cells, three rows deep , as required by the fourth-order MUSCL-TVD scheme. The MPI with nonblocking communication was used to...implemented ERDC/CHL CHETN-I-87 July 2015 12 SPONGE LAYER SPONGE_ON Sponge_west_width Sponge_east_width Sponge_south_width

A high-resolution multi-proxy record of geo-environmental change during the last deglaciation in the East Sea

NASA Astrophysics Data System (ADS)

Jin, J. H.; Kim, M. J.; Kim, J. H.; Um, I. K.; Bahk, J. J.; Kwon, Y. K.; Lee, K. E.; Khim, B. K.

2009-04-01

The East Sea (the Sea of Japan) is a marginal deep basin, almost enclosed by the landmass of Korea and Japan. It is connected with the North Pacific Ocean only by four small shallow straits, Korea and Tsushima Strait (140 m deep), Tsugaru Strait (130 m deep), Soya Strait (55 m deep) and Tartar Strait (12 m deep). For the glacial periods such as the last glaciation, the sea has experienced a large magnitude of sea level fall reinforcing isolation of the sea from the open ocean. The sea level falls can be recognized by presence of dark sediment layers whereas values of oxygen isotope on foraminfera tests are not well accordant with those recorded in open oceans. A 20 m-long sediment core was raised from a deep borehole located on the southern slope of the East Sea where sedimentation rates exceed 0.3 mm/yr for the last deglaciation period. The core was analyzed at a dense interval (ca. 5 cm) to reveal vertical variation of opal content, del values of oxygen and carbon, TOC and CaCO3 content and C/N ratio. Among them, the opal content somewhat mimics the trend of del value of oxygen isotopes in open oceans: low during the last glacial period, increase during the deglaciation and high in Holocene. A sharp negative depression also occurs during the Younger Dryas event. Hence the opal content could be a good proxy record for the environmental change during late Pleistocene to Holocene. A large-scale negative depression of the opal content is also shown during Holocene. The depression is not well matched with the trend of oxygen isotope records in open oceans, suggestive of a particular event in this local area.

On sharp vorticity gradients in elongating baroclinic eddies and their stabilization with a solid-body rotation

NASA Astrophysics Data System (ADS)

Sutyrin, Georgi G.

2016-06-01

Wide compensated vortices are not able to remain circular in idealized two-layer models unless the ocean depth is assumed to be unrealistically large. Small perturbations on both cyclonic and anticyclonic eddies grow slower if a middle layer with uniform potential vorticity (PV) is added, owing to a weakening of the vertical coupling between the upper and lower layers and a reduction of the PV gradient in the deep layer. Numerical simulations show that the nonlinear development of the most unstable elliptical mode causes self-elongation of the upper vortex core and splitting of the deep PV anomaly into two corotating parts. The emerging tripolar flow pattern in the lower layer results in self-intensification of the fluid rotation in the water column around the vortex center. Further vortex evolution depends on the model parameters and initial conditions, which limits predictability owing to multiple equilibrium attractors existing in the dynamical system. The vortex core strips thin filaments, which roll up into submesoscale vortices to result in substantial mixing at the vortex periphery. Stirring and damping of vorticity by bottom friction are found to be essential for subsequent vortex stabilization. The development of sharp PV gradients leads to nearly solid-body rotation inside the vortex core and formation of transport barriers at the vortex periphery. These processes have important implications for understanding the longevity of real-ocean eddies.

Precipitation hydrometeor type relative to the mesoscale airflow in mature oceanic deep convection of the Madden-Julian Oscillation

DOE PAGES

Barnes, Hannah C.; Houze, Robert A.

2014-12-25

We present that composite analysis of mature near-equatorial oceanic mesoscale convective systems (MCSs) during the active stage of the Madden-Julian Oscillation (MJO) shows where different hydrometeor types occur relative to convective updraft and stratiform midlevel inflow layers. The National Center for Atmospheric Research (NCAR) S-PolKa radar observed these MCSs during the Dynamics of the Madden-Julian Oscillation/Atmospheric Radiation Measurement-MJO Investigation Experiment (DYNAMO/AMIE). NCAR's particle identification algorithm (PID) is applied to S-PolKa's polarimetric data to identify the dominant hydrometeor type in each radar sample volume. Combining S-PolKa's Doppler velocity data with the PID demonstrates that hydrometeors have a systematic relationship to themore » airflow within mature MCSs. In the convective region, moderate rain occurs within the updraft core; the heaviest rain occurs just downwind of the core; wet aggregates occur immediately below the melting layer; narrow zones containing graupel/rimed aggregates occur just downstream of the updraft core at midlevels; dry aggregates dominate above the melting level; and smaller ice particles occur along the edges of the convective zone. In the stratiform region, rain intensity decreases toward the anvil; melting aggregates occur in horizontally extensive but vertically thin regions at the melting layer; intermittent pockets of graupel/rimed aggregates occur atop the melting layer; dry aggregates and small ice particles occur sequentially above the melting level; and horizontally oriented ice crystals occur between -10°C and -20°C in turbulent air above the descending midlevel inflow, suggesting enhanced depositional growth of dendrites. Finally, the organization of hydrometeors within the midlevel inflow layer is insensitive to the presence or absence of a leading convective line.« less

Antecedent reactivation by surface and deep anaphora in Norwegian

PubMed Central

HESTVIK, ARILD; NORDBY, HELGE; KARLSEN, GEIR

2005-01-01

Anaphora are expressions in language that depend on other linguistic entities for their full meaning. They can furthermore be divided into two types according to the level of representation where they find their antecedents: Surface anaphora, which resolve their reference at the sentence representation level, and deep anaphora, which resolve their reference at the non-grammatical level of discourse representation. The linguistic theory of these two anaphor types, and recent findings about processing differences at these two levels, combine to predict that surface anaphora should show fast and immediate reactivation of their antecedents, whereas deep anaphora should have a slower time course of antecedent reaccess. These predictions were confirmed with two lexical decision task experiments with Norwegian stimuli. PMID:15842413

The Role of “Vortical” Hot Towers in the Formation of Tropical Cyclone Diana (1984).

NASA Astrophysics Data System (ADS)

Hendricks, Eric A.; Montgomery, Michael T.; Davis, Christopher A.

2004-06-01

A high-resolution (3-km horizontal grid spacing) near-cloud-resolving numerical simulation of the formation of Hurricane Diana (1984) is used to examine the contribution of deep convective processes to tropical cyclone formation. This study is focused on the 3-km horizontal grid spacing simulation because this simulation was previously found to furnish an accurate forecast of the later stages of the observed storm life cycle. The numerical simulation reveals the presence of vortical hot towers, or cores of deep cumulonimbus convection possessing strong vertical vorticity, that arise from buoyancy-induced stretching of local absolute vertical vorticity in a vorticity-rich prehurricane environment.At near-cloud-resolving scales, these vortical hot towers are the preferred mode of convection. They are demonstrated to be the most important influence to the formation of the tropical storm via a two-stage evolutionary process: (i) preconditioning of the local environment via diabatic production of multiple small-scale lower-tropospheric cyclonic potential vorticity (PV) anomalies, and (ii) multiple mergers and axisymmetrization of these low-level PV anomalies. The local warm-core formation and tangential momentum spinup are shown to be dominated by the organizational process of the diabatically generated PV anomalies; the former process being accomplished by the strong vertical vorticity in the hot tower cores, which effectively traps the latent heat from moist convection. In addition to the organizational process of the PV anomalies, the cyclogenesis is enhanced by the aggregate diabatic heating associated with the vortical hot towers, which produces a net influx of low-level mean angular momentum throughout the genesis.Simpler models are examined to elucidate the underlying dynamics of tropical cyclogenesis in this case study. Using the Sawyer Eliassen balanced vortex model to diagnose the macroscale evolution, the cyclogenesis of Diana is demonstrated to proceed in approximate gradient and hydrostatic balance at many instances, where local radial and vertical accelerations are small. Using a shallow water primitive equation model, a characteristic “moist” (diabatic) vortex merger in the cloud-resolving numerical simulation is captured in a large part by the barotropic model. Since a moist merger results in a stronger vortex and occurs twice as fast as a dry merger, it is inferred (consistent with related work) that a net low-level convergence can accelerate and intensify the merger process in the real atmosphere.Although the findings reported herein are based on a sole case study and thus cannot yet be generalized, it is believed the results are sufficiently interesting to warrant further idealized simulations of this nature.

Electrical Investigation of Metal-Olivine Systems and Application to the Deep Interior of Mercury

NASA Astrophysics Data System (ADS)

Zhang, Zhou; Pommier, Anne

2017-12-01

We report electrical conductivity measurements on metal-olivine systems at about 5 and 6 GPa and up to 1,675°C in order to investigate the electrical properties of core-mantle boundary (CMB) systems. Electrical experiments were conducted in the multianvil apparatus using the impedance spectroscopy technique. The samples are composed of one metal layer (Fe, FeS, FeSi2, or Fe-Ni-S-Si) and one polycrystalline olivine layer, with the metal:olivine ratio ranging from 1:0.7 to 1:9.2. For all samples, we observe that the bulk electrical conductivity increases with temperature from 10-2.5 to 101.8 S/m, which is higher than the conductivity of polycrystalline olivine but lower than the conductivity of the pure metal phase at similar conditions. In some experiments, a conductivity jump is observed at the temperature corresponding to the melting temperature of the metallic phase. Both the metal:olivine ratio and the metal phase geometry control the electrical conductivity of the two-layer samples. By combining electrical results, textural analyses of the samples, and previous studies of the structure and composition of Mercury's interior, we propose an electrical profile of the deep interior of the planet that accounts for a layered CMB-outer core structure. The electrical model agrees with existing conductivity estimates of Mercury's lower mantle and CMB using magnetic observations and thermodynamic calculations, and thus, supports the hypothesis of a layered CMB-outermost core structure in the present-day interior of Mercury. We propose that the layered CMB-outer core structure is possibly electrically insulating, which may influence the planet's structure and cooling history.

Discovery of Cellulose Surface Layer Conformation by Nonlinear Vibrational Spectroscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Libing; Fu, Li; Wang, Hong-fei

2017-03-14

Significant questions remain with respect to the structure and polymorphs of cellulose. These include the cellulose surface layers and the bulk crystalline core as well as the conformational differences. The Total Internal Reflection Sum Frequency Generation Vibrational Spectroscopy (TIR-SFG-VS) combined with the conventional SFG-VS (non-TIR) can help to resolve these questions by selectively characterizing the molecular structures of surface layers and the crystalline core of cellulose. From the SFG spectra in the C-H and O-H regions, we found that the surface layers of Avicel are essentially amorphous; while the surface layers of Iβ cellulose are crystalline but with different structuralmore » and spectroscopic signatures than that of its crystalline core. This work demonstrates the capacity of TIR and Non-TIR SFG-VS tools in selectively studying the structures and polymorphs of cellulose. In addition, these results also suggest that the assignments of major vibrational peaks for cellulose need to be further determined.« less

The deep muscular plexus of the pig duodenum: a histochemical and ultrastructural study with special reference to the interstitial cells.

PubMed

Henry, M; Porcher, C; Julé, Y

1998-06-10

The aim of the present study was to describe the deep muscular plexus of the pig duodenum and to characterize its cellular components. Numerous nerve varicosities have been detected in the deep muscular plexus using anti-synaptophysin antibodies. Nerve fibres were also detected here in the outer circular muscle layer, whereas no nerve fibres were observed in the inner circular muscle layer. In the deep muscular plexus, nerve fibres projected to interstitial cells which were characterized at the ultrastructural level. The interstitial cells were of two kinds: the interstitial fibroblastic-like cells (FLC) and the interstitial dense cells (IDC), both of which were interposed between nerve fibres and smooth muscle cells. The FLC were characterized by their elongated bipolar shape, the lack of basal lamina, a well-developed endoplasmic reticulum, a Golgi apparatus, and intermediate filaments. They were closely apposed to axon terminals containing small clear synaptic vesicles and/or dense-cored vesicles. They were frequently connected to each other and to smooth muscle cells of the inner and outer circular layer by desmosomes and more rarely by gap junctions. The IDC are myoid-like cells. They had a stellate appearance and were characterized by a dense cell body, numerous caveolae, and a discontinuous basal lamina. The IDC were always closely apposed to nerve fibres and were connected to smooth muscle cells by desmosomes and small gap junctions. The present results show the unique pattern of cellular organization of the deep muscular plexus of the pig small intestine. They suggest that the interstitial cells in the deep muscular plexus are involved in the integration and transmission of nervous inputs from myenteric neurons to the inner and outer circular muscle layers. The clear-cut distinction observed here between the two types of interstitial cells (fibroblastic and myoid-like) suggests that the interstitial cells of each type may also be involved in some other specific activity, which still remains to be determined.

Deep sediment resuspension and thick nepheloid layer generation by open-ocean convection

NASA Astrophysics Data System (ADS)

Durrieu de Madron, X.; Ramondenc, S.; Berline, L.; Houpert, L.; Bosse, A.; Martini, S.; Guidi, L.; Conan, P.; Curtil, C.; Delsaut, N.; Kunesch, S.; Ghiglione, J. F.; Marsaleix, P.; Pujo-Pay, M.; Séverin, T.; Testor, P.; Tamburini, C.

2017-03-01

The Gulf of Lions in the northwestern Mediterranean is one of the few sites around the world ocean exhibiting deep open-ocean convection. Based on 6 year long (2009-2015) time series from a mooring in the convection region, shipborne measurements from repeated cruises, from 2012 to 2015, and glider measurements, we report evidence of bottom thick nepheloid layer formation, which is coincident with deep sediment resuspension induced by bottom-reaching convection events. This bottom nepheloid layer, which presents a maximum thickness of more than 2000 m in the center of the convection region, probably results from the action of cyclonic eddies that are formed during the convection period and can persist within their core while they travel through the basin. The residence time of this bottom nepheloid layer appears to be less than a year. In situ measurements of suspended particle size further indicate that the bottom nepheloid layer is primarily composed of aggregates between 100 and 1000 µm in diameter, probably constituted of fine silts. Bottom-reaching open ocean convection, as well as deep dense shelf water cascading that occurred concurrently some years, lead to recurring deep sediments resuspension episodes. They are key mechanisms that control the concentration and characteristics of the suspended particulate matter in the basin, and in turn affect the bathypelagic biological activity.

Phreatomagmatic eruptions under the West Antarctic Ice Sheet: potential hazard for ice sheet stability

NASA Astrophysics Data System (ADS)

Iverson, N. A.; Dunbar, N. W.; Lieb-Lappen, R.; Kim, E. J.; Golden, E. J.; Obbard, R. W.

2014-12-01

Volcanic tephra layers have been seen in most ice cores in Antarctica. These tephra layers are deposited almost instantaneously across wide areas of ice sheets, creating horizons that can provide "pinning points" to adjust ice time scales that may otherwise be lacking detailed chronology. A combination of traditional particle morphology characterization by SEM with new non-destructive X-ray micro-computed tomography (Micro-CT) has been used to analyze selected coarse grained tephra in the West Antarctica Ice Sheet (WAIS) Divide WDC06A ice core. Micro-CT has the ability to image particles as small as 50µm in length (15µm resolution), quantifying both particle shape and size. The WDC06A contains hundreds of dusty layers of which 36 have so far been identified as primary tephra layers. Two of these tephra layers have been characterized as phreatomagmatic eruptions based on SEM imagery and are blocky and platy in nature, with rare magmatic particles. These layers are strikingly different in composition from the typical phonolitic and trachytic tephra produced from West Antarctic volcanoes. These two layers are coarser in grain size, with many particles (including feldspar crystals) exceeding 100µm in length. One tephra layer found at 3149.138m deep in the ice core is a coarse ~1mm thick basanitic tephra layer with a WDC06-7 ice core age of 45,381±2000yrs. The second layer is a ~1.3 cm thick zoned trachyandesite to trachydacite tephra found at 2569.205m deep with an ice core age 22,470±835yrs. Micro-CT analysis shows that WDC06A-3149.138 has normal grading with the largest particles at the bottom of the sample (~160μm). WDC06A-2569.205 has a bimodal distribution of particles with large particles at the top and bottom of the layer. These large particles are more spherical in shape at the base and become more irregular and finer grained higher in the layer, likely showing changes in eruption dynamics. The distinct chemistry as well as the blocky and large grain size of the two tephra lead us to believe that these eruptions are from volcanoes proximal to WAIS Divide and did not transport far because neither tephra was observed in the Byrd core (<100km away). It is likely that these tephra are sourced from volcanoes beneath the WAIS and have since been buried and if they were to erupt again, may contribute to ice sheet instability.

Greenland-Wide Seasonal Temperatures During the Last Deglaciation

NASA Astrophysics Data System (ADS)

Buizert, C.; Keisling, B. A.; Box, J. E.; He, F.; Carlson, A. E.; Sinclair, G.; DeConto, R. M.

2018-02-01

The sensitivity of the Greenland ice sheet to climate forcing is of key importance in assessing its contribution to past and future sea level rise. Surface mass loss occurs during summer, and accounting for temperature seasonality is critical in simulating ice sheet evolution and in interpreting glacial landforms and chronologies. Ice core records constrain the timing and magnitude of climate change but are largely limited to annual mean estimates from the ice sheet interior. Here we merge ice core reconstructions with transient climate model simulations to generate Greenland-wide and seasonally resolved surface air temperature fields during the last deglaciation. Greenland summer temperatures peak in the early Holocene, consistent with records of ice core melt layers. We perform deglacial Greenland ice sheet model simulations to demonstrate that accounting for realistic temperature seasonality decreases simulated glacial ice volume, expedites the deglacial margin retreat, mutes the impact of abrupt climate warming, and gives rise to a clear Holocene ice volume minimum.

Flow throughout the Earth's core inverted from geomagnetic observations and numerical dynamo models

NASA Astrophysics Data System (ADS)

Aubert, Julien

2013-02-01

This paper introduces inverse geodynamo modelling, a framework imaging flow throughout the Earth's core from observations of the geomagnetic field and its secular variation. The necessary prior information is provided by statistics from 3-D and self-consistent numerical simulations of the geodynamo. The core method is a linear estimation (or Kalman filtering) procedure, combined with standard frozen-flux core surface flow inversions in order to handle the non-linearity of the problem. The inversion scheme is successfully validated using synthetic test experiments. A set of four numerical dynamo models of increasing physical complexity and similarity to the geomagnetic field is then used to invert for flows at single epochs within the period 1970-2010, using data from the geomagnetic field models CM4 and gufm-sat-Q3. The resulting core surface flows generally provide satisfactory fits to the secular variation within the level of modelled errors, and robustly reproduce the most commonly observed patterns while additionally presenting a high degree of equatorial symmetry. The corresponding deep flows present a robust, highly columnar structure once rotational constraints are enforced to a high level in the prior models, with patterns strikingly similar to the results of quasi-geostrophic inversions. In particular, the presence of a persistent planetary scale, eccentric westward columnar gyre circling around the inner core is confirmed. The strength of the approach is to uniquely determine the trade-off between fit to the data and complexity of the solution by clearly connecting it to first principle physics; statistical deviations observed between the inverted flows and the standard model behaviour can then be used to quantitatively assess the shortcomings of the physical modelling. Such deviations include the (i) westwards and (ii) hemispherical character of the eccentric gyre. A prior model with angular momentum conservation of the core-mantle inner-core system, and gravitational coupling of reasonable strength between the mantle and the inner core, is shown to produce enough westward drift to resolve statistical deviation (i). Deviation (ii) is resolved by a prior with an hemispherical buoyancy release at the inner-core boundary, with excess buoyancy below Asia. This latter result suggests that the recently proposed inner-core translational instability presently transports the solid inner-core material westwards, opposite to the seismologically inferred long-term trend but consistently with the eccentricity of the geomagnetic dipole in recent times.

Astronomical calibration of the first Toba super-eruption from deep-sea sediments

NASA Astrophysics Data System (ADS)

Lee, M.; Chen, C.; Wei, K.; Iizuka, Y.

2003-04-01

Correlations between tephra layers interbedded within deep-sea cores and radiometrically dated volcanic eruptions provide an independent means of verifying dating techniques developed for sediment cores. Alternatively, the chronostratigraphic framework developed from marine sediments can be used to calibrate ages of land-base eruptions, if geochemical correlations can be established. In this study, we examined three deep-sea cores along an east-west transection across the South China Sea, with a distance of ~1800 to 2500 km away from the Toba caldera. The occurrence of the Oldest Toba Tuff was recognized on the basis of its geochemical characteristics, such as a high-silicate, high-potassium content and a distinct strontium isotope composition. The correlative tephra layer occurs slightly above the Australasian microtektite layer and below the Brunhes/Matuyama boundary, which in constitute three time-parallel markers for correlation and dating of Quaternary stratigraphic records. Against the astronomically tuned oxygen isotope chronostratigraphy, the rhyolitic ignimbrite erupted during the transition from marine isotope stage 20 (glacial) to stage 19 (interglacial) with an estimated age of 788 ka. The refined age is in good agreement with the radiometric age of 800+20 ka for Layer D of ODP Site 758 (Hall and Farrell, 1995), but significantly younger than the commonly referred age of 840+30 ka (Diehl et al., 1987). The mid-Pleistocene eruption expelled at least 800-1000 km3 dense-rock-equivalent of rhyolitic magma taking into account the widespread ashfall deposits in the Indian Ocean and the South China Sea basins. In spite of its exceptional magnitude, the timing of the first Toba super-eruption disputes a possible causal linkage between a major volcanic eruption and a long-term global climatic deterioration.

Evaluation of cloud-resolving and limited area model intercomparison simulations using TWP-ICE observations: 1. Deep convective updraft properties: Eval. of TWP-ICE CRMs and LAMs Pt. 1

DOE Office of Scientific and Technical Information (OSTI.GOV)

Varble, Adam; Zipser, Edward J.; Fridlind, Ann M.

2014-12-18

Ten 3D cloud-resolving model (CRM) simulations and four 3D limited area model (LAM) simulations of an intense mesoscale convective system observed on 23-24 January 2006 during the Tropical Warm Pool – International Cloud Experiment (TWP-ICE) are compared with each other and with observed radar reflectivity fields and dual-Doppler retrievals of vertical wind speeds in an attempt to explain published results showing a high bias in simulated convective radar reflectivity aloft. This high bias results from ice water content being large, which is a product of large, strong convective updrafts, although hydrometeor size distribution assumptions modulate the size of this bias.more » Making snow mass more realistically proportional to D2 rather than D3 eliminates unrealistically large snow reflectivities over 40 dBZ in some simulations. Graupel, unlike snow, produces high biased reflectivity in all simulations, which is partly a result of parameterized microphysics, but also partly a result of overly intense simulated updrafts. Peak vertical velocities in deep convective updrafts are greater than dual-Doppler retrieved values, especially in the upper troposphere. Freezing of liquid condensate, often rain, lofted above the freezing level in simulated updraft cores greatly contributes to these excessive upper tropospheric vertical velocities. The strongest simulated updraft cores are nearly undiluted, with some of the strongest showing supercell characteristics during the multicellular (pre-squall) stage of the event. Decreasing horizontal grid spacing from 900 to 100 meters slightly weakens deep updraft vertical velocity and moderately decreases the amount of condensate aloft, but not enough to match observational retrievals. Therefore, overly intense simulated updrafts may additionally be a product of unrealistic interactions between convective dynamics, parameterized microphysics, and the large-scale model forcing that promote different convective strengths than observed.« less

An Efficient Implementation of Deep Convolutional Neural Networks for MRI Segmentation.

PubMed

Hoseini, Farnaz; Shahbahrami, Asadollah; Bayat, Peyman

2018-02-27

Image segmentation is one of the most common steps in digital image processing, classifying a digital image into different segments. The main goal of this paper is to segment brain tumors in magnetic resonance images (MRI) using deep learning. Tumors having different shapes, sizes, brightness and textures can appear anywhere in the brain. These complexities are the reasons to choose a high-capacity Deep Convolutional Neural Network (DCNN) containing more than one layer. The proposed DCNN contains two parts: architecture and learning algorithms. The architecture and the learning algorithms are used to design a network model and to optimize parameters for the network training phase, respectively. The architecture contains five convolutional layers, all using 3 × 3 kernels, and one fully connected layer. Due to the advantage of using small kernels with fold, it allows making the effect of larger kernels with smaller number of parameters and fewer computations. Using the Dice Similarity Coefficient metric, we report accuracy results on the BRATS 2016, brain tumor segmentation challenge dataset, for the complete, core, and enhancing regions as 0.90, 0.85, and 0.84 respectively. The learning algorithm includes the task-level parallelism. All the pixels of an MR image are classified using a patch-based approach for segmentation. We attain a good performance and the experimental results show that the proposed DCNN increases the segmentation accuracy compared to previous techniques.

Sedimentary records of Typhoon Haiyan in the South China Sea

NASA Astrophysics Data System (ADS)

Su, C. C.; Chen, Y. H.; Chang, J. H.; Hsu, H. H.; Yu, P. S.; Liu, C. S.

2016-12-01

South China Sea (SCS), which is located at the boundary of the Eurasian, Philippine Sea, and Indian plates, is the largest marginal sea of the northwest Pacific and also on the North Western Pacific corridor of typhoons. The unique tectonic setting and climatic conditions make it has to face the severe natural hazards, like submarine landslides, and high sediment discharges which induced by typhoon. On November 8, 2013, the Typhoon Haiyan, which was one of the largest tropical cyclones ever recorded in western Pacific, devastated Philippines and caused catastrophic destruction. Before the Typhoon Haiyan reached Hainan Province, China and Quangninh Province, Vietnam, it emerged over the SCS. How was the large amount of terrestrial materials distributed and recorded in deep sea sediments by such intense typhoon? Is it possible for us to reconstruct the history of extreme tropical cyclones by using deep sea cores? In this study, twelve gravity cores were collected in the Central SCS Basin and around Taiping Island (Itu Aba Island) from 2014 to 2015 and a series of analysis including Multi-Sensor Core Logger, XRF Core Scanner, core surface and X-radiograph images, grain size, and excess 210Pb chronology were conducted for modern extreme event records in cores and attempt to evaluate the possibility of reconstructed extreme typhoon records in cores from the SCS. On core surface images, an obvious brownish oxidized layer exist in core top with higher 210Pb activities beneath the layer. According to the sampling time, we conjecture the oxidized layer might formed by Typhoon Haiyan in 2013. In addition, the Itrax data shows high manganese content only exist in this layer which might related to the modern industrial pollution delivered by typhoon induced flooding from Philippines. The Power Barge 103 of Napocor in Estancia IIoilo was dislodged from its mount by Typhoon Haiyan and the United Nations Disaster Assessment and Coordination Team reported 600,000 liters of bunker fuel had spilled. To clarify the relationship between the oil spill and high manganese records in sediments, some further analysis is needed. Our analysis result shows, in the Central SCS Basin, over 80 cm turbidite layer was deposited by Typhoon Haiyan and it will take more than 4000 years to deposit on seafloor without the impact of extreme events.

gC1qR expression in chimpanzees with resolved and chronic infection: Potential role of HCV core/gC1qR-mediated T cell suppression in the outcome of HCV infection

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yao Zhiqang; Shata, Mohamed Tarek; Tricoche, Nancy

2006-03-15

Chimpanzee is a unique animal model for HCV infection, in which about 50% of infections resolve spontaneously. It has been reported that the magnitude of T cell responses to HCV core in recovered chimpanzees is greater than that in chronically infected ones. However, the mechanism(s) by which the chimpanzees with resolved infection overcome core-mediated immunosuppression remains unknown. In this study, we examined the effect of HCV core on T cell responsiveness in chimpanzees with resolved and chronic HCV infection. We found that core protein strongly inhibited T cell activation and proliferation in chimpanzees with chronic infection, while this inhibition wasmore » limited in chimpanzees with resolved infection. Notably, the level of gC1qR, as well as the binding of core protein, on the surface of T cells was lower in recovered chimpanzees when compared to chimpanzees with chronic HCV infection. Intriguingly, the observed differences in gC1qR expression levels and susceptibility to core-induced suppression amongst HCV-chronically infected and recovered chimpanzees were observed prior to HCV challenge, suggesting a possible genetic determination of the outcome of infection. These findings suggest that gC1qR expression on the surface of T cells is crucial for HCV core-mediated T cell suppression and viral clearance, and that represents a novel mechanism by which a virus usurps host machinery for persistence.« less

Cloud Properties Simulated by a Single-Column Model. Part II: Evaluation of Cumulus Detrainment and Ice-phase Microphysics Using a Cloud Resolving Model

NASA Technical Reports Server (NTRS)

Luo, Yali; Krueger, Steven K.; Xu, Kuan-Man

2005-01-01

This paper is the second in a series in which kilometer-scale-resolving observations from the Atmospheric Radiation Measurement program and a cloud-resolving model (CRM) are used to evaluate the single-column model (SCM) version of the National Centers for Environmental Prediction Global Forecast System model. Part I demonstrated that kilometer-scale cirrus properties simulated by the SCM significantly differ from the cloud radar observations while the CRM simulation reproduced most of the cirrus properties as revealed by the observations. The present study describes an evaluation, through a comparison with the CRM, of the SCM's representation of detrainment from deep cumulus and ice-phase microphysics in an effort to better understand the findings of Part I. It is found that detrainment occurs too infrequently at a single level at a time in the SCM, although the detrainment rate averaged over the entire simulation period is somewhat comparable to that of the CRM simulation. Relatively too much detrained ice is sublimated when first detrained. Snow falls over too deep of a layer due to the assumption that snow source and sink terms exactly balance within one time step in the SCM. These characteristics in the SCM parameterizations may explain many of the differences in the cirrus properties between the SCM and the observations (or between the SCM and the CRM). A possible improvement for the SCM consists of the inclusion of multiple cumulus cloud types as in the original Arakawa-Schubert scheme, prognostically determining the stratiform cloud fraction and snow mixing ratio. This would allow better representation of the detrainment from deep convection, better coupling of the volume of detrained air with cloud fraction, and better representation of snow field.

A very slow basal layer underlying large-scale low-velocity anomalies in the lower mantle beneath the Pacific: evidence from core phases

NASA Astrophysics Data System (ADS)

Garnero, Edward J.; Helmberger, Donald V.

A multi-phase analysis using long-period World Wide Standardized Seismograph Network and Canadian Network data has been conducted using core-phases for deep focus events from the southwest Pacific. These include SKS, S2KS, SV diff, and SP dKS. The last phase emerges from SKS near 106° and is associated with a P-wave diffracting along the bottom of the mantle. Patterns in S2KS - SKS differential travel times ( TS2KS - SKS) correlate with those in SP dKS - SKS ( TSP dKS - SKS ). TS2KS - SKS values strongly depend on variations in VS structure in the lower third of the mantle, whereas TSP dKS - SKS values mainly depend on VP structure and variations in a thin zone (100 km or less) at the very base of the mantle. Anomalously large TS2KS - SKS and TSP dKS - SKS values (relative to the Preliminary Reference Earth Model (PREM)) are present for Fiji-Tonga and Kermadec events (recorded in North and South America), along with anomalously large SV diff amplitudes well into the core's shadow. More northerly paths beneath the Pacific to North America for Indonesian and Solomon events display both PREM-like and anomalous times. A model compatible with the observations is presented, and contains a thin very-low-velocity layer at the base of the mantle that underlies the large volumetric lower-mantle low-velocity regions in the southwest Pacific. A low-velocity layer of 20-100 km thickness with reductions of up to 5-10% (relative to PREM) can reproduce TSP dKS - SKS as well as SV diff amplitudes. Large-scale (more than 1000 km) lower-mantle VS heterogeneity (2-4%) can explain long-wavelength trends in TS2KS - SKS. The exact thickness and velocity reduction in the basal layer is uncertain, owing to difficulties in resolving whether anomalous structure occurs on the source- and/or receiver-side of wavepaths (at the CMB).

The hydrography of the Mozambique Channel from six years of continuous temperature, salinity, and velocity observations

NASA Astrophysics Data System (ADS)

Ullgren, J. E.; van Aken, H. M.; Ridderinkhof, H.; de Ruijter, W. P. M.

2012-11-01

Temperature, salinity and velocity data are presented, along with the estimated volume transport, from seven full-length deep sea moorings placed across the narrowest part of the Mozambique Channel, southwest Indian Ocean, during the period November 2003 to December 2009. The dominant water mass in the upper layer is Sub-Tropical Surface Water (STSW) which overlies South Indian Central Water (SICW), and is normally capped by fresher Tropical Surface Water (TSW). Upper ocean salinity increased through 2005 as a result of saline STSW taking up a relatively larger part of the upper layer, at the expense of TSW. Upper waters are on average warmer and lighter in the central Channel than on the sides. Throughout the upper 1.5 km of the water column there is large hydrographic variability, short-term as well as interannual, and in particular at frequencies (four to seven cycles per year) associated with the southward passage of anticyclonic Mozambique Channel eddies. The eddies have a strong T-S signal, in the upper and central waters as well as on the intermediate level, as the eddies usually carry saline Red Sea Water (RSW) in their core. While the interannual frequency band displays an east-west gradient with higher temperature variance on the western side, the eddy frequency band shows highest variance in the centre of the Channel, where the eddy band contains about 40% of the total isopycnal hydrographic variability. Throughout the >6 years of measurements, the frequency and characteristics of eddies vary between periods, both in terms of strength and vertical structure of eddy T-S signals. These changes contribute to the interannual variability of water mass properties: an increase in central water salinity to a maximum in late 2007 coincided with a period of unusually frequent eddies with strong salinity signals. The warmest and most saline deep water is found within the northward flowing Mozambique Undercurrent, on the western side of the Channel. The Undercurrent has two cores: an intermediate one mainly containing diluted Antarctic Intermediate Water (AAIW), and a deep one consisting of North Atlantic Deep Water (NADW). In the intermediate core, T-S properties are strongly correlated with current velocity, probably because of the strong salinity gradient at the interface between Red Sea Water (RSW) and AAIW. In the deep core, velocity and hydrographic time series do not correlate on a daily basis, but they do at longer time scales.

Nano suboxide layer generated in Ta{sub 2}O{sub 5} by Ar{sup +} ion irradiation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Song, W. D., E-mail: song-wendong@dsi.a-star.edu.sg, E-mail: ying-ji-feng@dsi.a-star.edu.sg; Ying, J. F., E-mail: song-wendong@dsi.a-star.edu.sg, E-mail: ying-ji-feng@dsi.a-star.edu.sg; He, W.

2015-01-19

Ta{sub 2}O{sub 5}/TaO{sub x} heterostructure has become a leading oxide layer in memory cells and/or a bidirectional selector for resistive random access memory (RRAM). Although atomic layer deposition (ALD) was found to be uniquely suitable for depositing uniform and conformal films on complex topographies, it is hard to use ALD to grow suboxide TaO{sub x} layer. In this study, tantalum oxide films with a composition of Ta{sub 2}O{sub 5} were grown by ALD. Using Ar{sup +} ion irradiation, the suboxide was formed in the top layer of Ta{sub 2}O{sub 5} films by observing the Ta core level shift toward lowermore » binding energy with angle-resolved X-ray photoelectron spectroscopy. By controlling the energy and irradiation time of an Ar{sup +} ion beam, Ta{sub 2}O{sub 5}/TaO{sub x} heterostructure can be reliably produced on ALD films, which provides a way to fabricate the critical switching layers of RRAM.« less

Deep Subsurface Microbial Communities Shaped by the Chicxulub Impactor

NASA Astrophysics Data System (ADS)

Cockell, C. S.; Coolen, M.; Schaefer, B.; Grice, K.; Gulick, S. P. S.; Morgan, J. V.; Kring, D. A.; Osinski, G.

2017-12-01

Fresh core material was obtained by drilling of the Chicxulub impact crater during IODP-ICDP Expedition 364 to assess the present-day biosphere in the crater structure. Cell enumerations through the core show that beneath the post-impact sedimentary rock there is a region of enhanced cell abundance that corresponds to the upper impact suevite layer (Units 1G/2A). We also observed a peak in cell numbers in samples at the bottom of suevite Unit 2C and between the suevitic and grainitoid interface (Unit 3/4). These patterns may reflect preferential movement of fluid and/or availability of nutrients and energy at interfaces. 16S rDNA analysis allows us to rule out contamination of the suevite material since no taxa associated with the drilling mud were observed. Two hundred and fifty microbial enrichments were established using diverse culture media for heterotrophs, autotrophs and chemolithotrophs at temperatures consistent with measured core temperatures. Six yielded growth in the breccia, lower breccia and upper granitoid layer and they affiliated with Acidiphilium, Thermoanaerobacteracea and Desulfohalbiaceae. The latter exhibited visible microbial sulfate-reduction. By contrast, the granitoid material exhibited low cell abundances, most samples were below direct cell detection. DNA extraction revealed pervasive low level contamination by drilling mud taxa, consistent with the highly fractured, high porosity of the impact-shocked granitoids. Few taxa can be attributed to an indigenous biota and no enrichments (at 60 and 70°C) yielded growth. These data show that even with a porosity approximately an order of magnitude greater than most unshocked granites, the uplifted granites have not experienced sufficient fluid flow to establish a significant deep biosphere. Paleosterilisation of the material during impact may have re-set colonisation and the material may have originally been below the depth at which temperatures exceeded the upper temperature limit for life. These data show that the deep biosphere can preserve the imprint of catastrophe long after these events. In this case, the distribution of deep subsurface microbial communities reflects the lithological sequence established during the substantial impact-induced geological rearrangements that occurred in the first hours of the Cenozoic.

Physical, Chemical, and Hydrologic Characteristics of Active Layer and Permafrost Soils of Arctic Polygonal Tundra, Barrow, Alaska, 2013-2016

DOE Data Explorer

Yuxin Wu; Craig Ulrich; Tim Kneafsey

2018-03-22

This dataset reports the results of physical, chemical, and hydrologic analyses of soil cores collected at the NGEE Arctic Intensive Sites 0 and 1 (Plots A, B, C, and D) during late winter seasons (April-May) from 2013 to 2016. Locations were selected across the polygonal ground to include low, flat, and high centered polygons (LCPs, FCPs and HCPs) and internal features (i.e. the trough, center, and rim). The data are depth-resolved and down to ~ 4m below ground surface for some cores. The specific depths for each core where samples were analyzed vary from core to core.

Enhancement of the southward return flow of the Atlantic Meridional Overturning Circulation by data assimilation and its influence in an assimilative ocean simulation forced by CORE-II atmospheric forcing

NASA Astrophysics Data System (ADS)

Fujii, Yosuke; Tsujino, Hiroyuki; Toyoda, Takahiro; Nakano, Hideyuki

2017-08-01

This paper examines the difference in the Atlantic Meridional Overturning Circulation (AMOC) mean state between free and assimilative simulations of a common ocean model using a common interannual atmospheric forcing. In the assimilative simulation, the reproduction of cold cores in the Nordic Seas, which is absent in the free simulation, enhances the overflow to the North Atlantic and improves AMOC with enhanced transport of the deeper part of the southward return flow. This improvement also induces an enhanced supply of North Atlantic Deep Water (NADW) and causes better representation of the Atlantic deep layer despite the fact that correction by the data assimilation is applied only to temperature and salinity above a depth of 1750 m. It also affects Circumpolar Deep Water in the Southern Ocean. Although the earliest influence of the improvement propagated by coastal waves reaches the Southern Ocean in 10-15 years, substantial influence associated with the arrival of the renewed NADW propagates across the Atlantic Basin in several decades. Although the result demonstrates that data assimilation is able to improve the deep ocean state even if there is no data there, it also indicates that long-term integration is required to reproduce variability in the deep ocean originating from variations in the upper ocean. This study thus provides insights on the reliability of AMOC and the ocean state in the Atlantic deep layer reproduced by data assimilation systems.

Temperature and moisture effects on greenhouse gas emissions from deep active-layer boreal soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bond-Lamberty, Ben; Smith, A. Peyton; Bailey, Vanessa L.

Rapid climatic changes, rising air temperatures, and increased fires are expected to drive permafrost degradation and alter soil carbon (C) cycling in many high-latitude ecosystems. How these soils will respond to changes in their temperature, moisture, and overlying vegetation is uncertain but critical to understand given the large soil C stocks in these regions. We used a laboratory experiment to examine how temperature and moisture control CO 2 and CH 4 emissions from mineral soils sampled from the bottom of the annual active layer, i.e., directly above permafrost, in an Alaskan boreal forest. Gas emissions from 30 cores, subjected tomore » two temperatures and either field moisture conditions or experimental drought, were tracked over a 100-day incubation; we also measured a variety of physical and chemical characteristics of the cores. Gravimetric water content was 0.31 ± 0.12 (unitless) at the beginning of the incubation; cores at field moisture were unchanged at the end, but drought cores had declined to 0.06 ± 0.04. Daily CO 2 fluxes were positively correlated with incubation chamber temperature, core water content, and percent soil nitrogen. They also had a temperature sensitivity ( Q 10) of 1.3 and 1.9 for the field moisture and drought treatments, respectively. Daily CH 4 emissions were most strongly correlated with percent nitrogen, but neither temperature nor water content was a significant first-order predictor of CH 4 fluxes. The cumulative production of C from CO 2 was over 6 orders of magnitude higher than that from CH 4; cumulative CO 2 was correlated with incubation temperature and moisture treatment, with drought cores producing 52–73 % lower C. Cumulative CH 4 production was unaffected by any treatment. These results suggest that deep active-layer soils may be sensitive to changes in soil moisture under aerobic conditions, a critical factor as discontinuous permafrost thaws in interior Alaska. Furthermore, deep but unfrozen high-latitude soils have been shown to be strongly affected by long-term experimental warming, and these results provide insight into their future dynamics and feedback potential with future climate change.« less

Temperature and moisture effects on greenhouse gas emissions from deep active-layer boreal soils

DOE PAGES

Bond-Lamberty, Ben; Smith, A. Peyton; Bailey, Vanessa L.

2016-12-21

Rapid climatic changes, rising air temperatures, and increased fires are expected to drive permafrost degradation and alter soil carbon (C) cycling in many high-latitude ecosystems. How these soils will respond to changes in their temperature, moisture, and overlying vegetation is uncertain but critical to understand given the large soil C stocks in these regions. We used a laboratory experiment to examine how temperature and moisture control CO 2 and CH 4 emissions from mineral soils sampled from the bottom of the annual active layer, i.e., directly above permafrost, in an Alaskan boreal forest. Gas emissions from 30 cores, subjected tomore » two temperatures and either field moisture conditions or experimental drought, were tracked over a 100-day incubation; we also measured a variety of physical and chemical characteristics of the cores. Gravimetric water content was 0.31 ± 0.12 (unitless) at the beginning of the incubation; cores at field moisture were unchanged at the end, but drought cores had declined to 0.06 ± 0.04. Daily CO 2 fluxes were positively correlated with incubation chamber temperature, core water content, and percent soil nitrogen. They also had a temperature sensitivity ( Q 10) of 1.3 and 1.9 for the field moisture and drought treatments, respectively. Daily CH 4 emissions were most strongly correlated with percent nitrogen, but neither temperature nor water content was a significant first-order predictor of CH 4 fluxes. The cumulative production of C from CO 2 was over 6 orders of magnitude higher than that from CH 4; cumulative CO 2 was correlated with incubation temperature and moisture treatment, with drought cores producing 52–73 % lower C. Cumulative CH 4 production was unaffected by any treatment. These results suggest that deep active-layer soils may be sensitive to changes in soil moisture under aerobic conditions, a critical factor as discontinuous permafrost thaws in interior Alaska. Furthermore, deep but unfrozen high-latitude soils have been shown to be strongly affected by long-term experimental warming, and these results provide insight into their future dynamics and feedback potential with future climate change.« less

Temperature and moisture effects on greenhouse gas emissions from deep active-layer boreal soils

NASA Astrophysics Data System (ADS)

Bond-Lamberty, Ben; Smith, A. Peyton; Bailey, Vanessa

2016-12-01

Rapid climatic changes, rising air temperatures, and increased fires are expected to drive permafrost degradation and alter soil carbon (C) cycling in many high-latitude ecosystems. How these soils will respond to changes in their temperature, moisture, and overlying vegetation is uncertain but critical to understand given the large soil C stocks in these regions. We used a laboratory experiment to examine how temperature and moisture control CO2 and CH4 emissions from mineral soils sampled from the bottom of the annual active layer, i.e., directly above permafrost, in an Alaskan boreal forest. Gas emissions from 30 cores, subjected to two temperatures and either field moisture conditions or experimental drought, were tracked over a 100-day incubation; we also measured a variety of physical and chemical characteristics of the cores. Gravimetric water content was 0.31 ± 0.12 (unitless) at the beginning of the incubation; cores at field moisture were unchanged at the end, but drought cores had declined to 0.06 ± 0.04. Daily CO2 fluxes were positively correlated with incubation chamber temperature, core water content, and percent soil nitrogen. They also had a temperature sensitivity (Q10) of 1.3 and 1.9 for the field moisture and drought treatments, respectively. Daily CH4 emissions were most strongly correlated with percent nitrogen, but neither temperature nor water content was a significant first-order predictor of CH4 fluxes. The cumulative production of C from CO2 was over 6 orders of magnitude higher than that from CH4; cumulative CO2 was correlated with incubation temperature and moisture treatment, with drought cores producing 52-73 % lower C. Cumulative CH4 production was unaffected by any treatment. These results suggest that deep active-layer soils may be sensitive to changes in soil moisture under aerobic conditions, a critical factor as discontinuous permafrost thaws in interior Alaska. Deep but unfrozen high-latitude soils have been shown to be strongly affected by long-term experimental warming, and these results provide insight into their future dynamics and feedback potential with future climate change.

[Retinal whitening following vitrectomy for epiretinal macular membrane].

PubMed

Uemura, A

1993-09-01

To investigate the clinical pictures of retinal whitening following epiretinal membrane dissection. I studied retrospectively the records of 18 eyes which had undergone vitrectomy. Two types of retinal whitening were observed: cotton wool-like spots within the superficial retinal layers and a linear or dendritic pattern within the deep retinal layers. The spots were mainly noted in idiopathic cases and resolved completely in a few weeks, and the pattern was observed in macular pucker cases after retinal detachment surgery and persisted for a long time after vitrectomy.

Degradation of CMOS image sensors in deep-submicron technology due to γ-irradiation

NASA Astrophysics Data System (ADS)

Rao, Padmakumar R.; Wang, Xinyang; Theuwissen, Albert J. P.

2008-09-01

In this work, radiation induced damage mechanisms in deep submicron technology is resolved using finger gated-diodes (FGDs) as a radiation sensitive tool. It is found that these structures are simple yet efficient structures to resolve radiation induced damage in advanced CMOS processes. The degradation of the CMOS image sensors in deep-submicron technology due to γ-ray irradiation is studied by developing a model for the spectral response of the sensor and also by the dark-signal degradation as a function of STI (shallow-trench isolation) parameters. It is found that threshold shifts in the gate-oxide/silicon interface as well as minority carrier life-time variations in the silicon bulk are minimal. The top-layer material properties and the photodiode Si-SiO2 interface quality are degraded due to γ-ray irradiation. Results further suggest that p-well passivated structures are inevitable for radiation-hard designs. It was found that high electrical fields in submicron technologies pose a threat to high quality imaging in harsh environments.

Ganymede G1 & G2 Encounters - Interior of Ganymede

NASA Image and Video Library

1997-12-16

NASA's Voyager images are used to create a global view of Ganymede. The cut-out reveals the interior structure of this icy moon. This structure consists of four layers based on measurements of Ganymede's gravity field and theoretical analyses using Ganymede's known mass, size and density. Ganymede's surface is rich in water ice and Voyager and Galileo images show features which are evidence of geological and tectonic disruption of the surface in the past. As with the Earth, these geological features reflect forces and processes deep within Ganymede's interior. Based on geochemical and geophysical models, scientists expected Ganymede's interior to either consist of: a) an undifferentiated mixture of rock and ice or b) a differentiated structure with a large lunar sized "core" of rock and possibly iron overlain by a deep layer of warm soft ice capped by a thin cold rigid ice crust. Galileo's measurement of Ganymede's gravity field during its first and second encounters with the huge moon have basically confirmed the differentiated model and allowed scientists to estimate the size of these layers more accurately. In addition the data strongly suggest that a dense metallic core exists at the center of the rock core. This metallic core suggests a greater degree of heating at sometime in Ganymede's past than had been proposed before and may be the source of Ganymede's magnetic field discovered by Galileo's space physics experiments. http://photojournal.jpl.nasa.gov/catalog/PIA00519

Angle-resolved and core-level photoemission study of interfacing the topological insulator Bi1.5Sb0.5Te1.7Se1.3 with Ag, Nb, and Fe

NASA Astrophysics Data System (ADS)

de Jong, N.; Frantzeskakis, E.; Zwartsenberg, B.; Huang, Y. K.; Wu, D.; Hlawenka, P.; Sańchez-Barriga, J.; Varykhalov, A.; van Heumen, E.; Golden, M. S.

2015-08-01

Interfaces between a bulk-insulating topological insulator (TI) and metallic adatoms have been studied using high-resolution, angle-resolved, and core-level photoemission. Fe, Nb, and Ag were evaporated onto Bi1 .5Sb0 .5Te1 .7Se1 .3 (BSTS) surfaces both at room temperature and 38 K. The coverage and temperature dependence of the adsorption and interfacial formation process have been investigated, highlighting the effects of the overlayer growth on the occupied electronic structure of the TI. For all coverages at room temperature and for those equivalent to less than 0.2 monolayer at low temperature all three metals lead to a downward shift of the TI bands with respect to the Fermi level. At room temperature Ag appears to intercalate efficiently into the van der Waals gap of BSTS, accompanied by low-level substitution for the Te/Se atoms of the termination layer of the crystal. This Te/Se substitution with silver increases significantly for low temperature adsorption, and can even dominate the electrostatic environment of the Bi/Sb atoms in the BSTS near-surface region. On the other hand, Fe and Nb evaporants remain close to the termination layer of the crystal. On room temperature deposition, they initially substitute isoelectronically for Bi as a function of coverage, before substituting for Te/Se atoms. For low temperature deposition, Fe and Nb are too immobile for substitution processes and show a behavior consistent with clustering on the surface. For both Ag and Fe/Nb, these differing adsorption pathways still lead to the qualitatively similar and remarkable behavior for low temperature deposition that the chemical potential first moves downward (p -type dopant behavior) and then upward (n -type behavior) on increasing coverage.

Origin and Constraints on Ilmenite-rich Partial Melt in the Lunar Lower Mantle

NASA Astrophysics Data System (ADS)

Mallik, A.; Fuqua, H.; Bremner, P. M.; Panovska, S.; Diamond, M. R.; Lock, S. J.; Nishikawa, Y.; Jiménez-Pérez, H.; Shahar, A.; Panero, W. R.; Lognonne, P. H.; Faul, U.

2015-12-01

Existence of a partially molten layer at the lunar core-mantle boundary has been proposed to explain the lack of observed far-side deep moonquakes, the observation of reflected seismic phases from deep moonquakes, and the dissipation of tidal energy within the lunar interior [1,2]. However, subsequent models explored the possibility that dissipation due to elevated temperatures alone can explain the observed dissipation factor (Q) and tidal love numbers [3]. Using thermo-chemical and dynamic modeling (including models of the early lunar mantle convection), we explore the hypothesis that an ilmenite-rich layer forms below crustal anorthosite during lunar magma ocean crystallization and may sink to the base of the mantle to create a partial melt layer at the lunar core-mantle boundary. Self-consistent physical parameters (including gravity, pressure, density, VP and Vs) are forward calculated for a well-mixed mantle with uniform bulk composition versus a mantle with preserved mineralogical stratigraphy from lunar magma ocean crystallization. These parameters are compared against observed mass, moment of inertia, real and imaginary parts of the Love numbers, and seismic travel times to further limit the acceptable models for the Moon. We have performed a multi-step grid search with over twenty thousand forward calculations varying thicknesses of chemically/mineralogically distinct layers within the Moon to evaluate if a partially molten layer at the base of the lunar mantle is well-constrained by the observed data. Furthermore, dynamic mantle modeling was employed on the best-fit model versions to determine the survivability of a partially molten layer at the core-mantle boundary. This work was originally initiated at the CIDER 2014 program. [1] Weber et al. (2011). Science 331(6015), 309-12. [2] Khan et al. (2014). JGR 119. [3] Nimmo et al. (2012). JGR 117, 1-11.

Nonhydrostatic icosahedral atmospheric model (NICAM) for global cloud resolving simulations

NASA Astrophysics Data System (ADS)

Satoh, M.; Matsuno, T.; Tomita, H.; Miura, H.; Nasuno, T.; Iga, S.

2008-03-01

A new type of ultra-high resolution atmospheric global circulation model is developed. The new model is designed to perform "cloud resolving simulations" by directly calculating deep convection and meso-scale circulations, which play key roles not only in the tropical circulations but in the global circulations of the atmosphere. Since cores of deep convection have a few km in horizontal size, they have not directly been resolved by existing atmospheric general circulation models (AGCMs). In order to drastically enhance horizontal resolution, a new framework of a global atmospheric model is required; we adopted nonhydrostatic governing equations and icosahedral grids to the new model, and call it Nonhydrostatic ICosahedral Atmospheric Model (NICAM). In this article, we review governing equations and numerical techniques employed, and present the results from the unique 3.5-km mesh global experiments—with O(10 9) computational nodes—using realistic topography and land/ocean surface thermal forcing. The results show realistic behaviors of multi-scale convective systems in the tropics, which have not been captured by AGCMs. We also argue future perspective of the roles of the new model in the next generation atmospheric sciences.

Hydroclimatic variability in the Levant during the early last glacial (∼ 117-75 ka) derived from micro-facies analyses of deep Dead Sea sediments

NASA Astrophysics Data System (ADS)

Neugebauer, I.; Schwab, M. J.; Waldmann, N. D.; Tjallingii, R.; Frank, U.; Hadzhiivanova, E.; Naumann, R.; Taha, N.; Agnon, A.; Enzel, Y.; Brauer, A.

2015-08-01

The new sediment record from the deep Dead Sea basin (ICDP core 5017-1) provides a unique archive for hydroclimatic variability in the Levant. Here, we present high-resolution sediment facies analysis and elemental composition by μXRF scanning of core 5017-1 to trace lake levels and responses of the regional hydroclimatology during the time interval from ca 117-75 ka, i.e. the transition between the last interglacial and the onset of the last glaciation. We distinguished six major micro-facies types and interpreted these and their alterations in the core in terms of relative lake level changes. The two end-member facies for highest and lowest lake levels are (a) up to several meters thick, greenish sediments of alternating aragonite and detrital marl laminae (aad) and (b) thick halite facies, respectively. Intermediate lake levels are characterised by detrital marls with varying amounts of aragonite, gypsum or halite, reflecting lower-amplitude, shorter-term variability. Two intervals of pronounced lake level drops occurred at ∼110-108 ± 5 and ∼93-87 ± 7 ka. They likely coincide with stadial conditions in the central Mediterranean (Melisey I and II pollen zones in Monticchio) and low global sea levels during MIS 5d and 5b. However, our data do not support the current hypothesis of an almost complete desiccation of the Dead Sea during the earlier of these lake level low stands based on a recovered gravel layer. Based on new petrographic analyses, we propose that, although it was a low stand, this well-sorted gravel layer may be a vestige of a thick turbidite that has been washed out during drilling rather than an in-situ beach deposit. Two intervals of higher lake stands at ∼108-93 ± 6 and ∼87-75 ± 7 ka correspond to interstadial conditions in the central Mediterranean, i.e. pollen zones St. Germain I and II in Monticchio, and GI 24 + 23 and 21 in Greenland, as well as to sapropels S4 and S3 in the Mediterranean Sea. These apparent correlations suggest a close link of the climate in the Levant to North Atlantic and Mediterranean climates during the time of the build-up of Northern Hemisphere ice shields in the early last glacial period.

Spectrally dependent photovoltages in Schottky photodiode based on (100) B-doped diamond

NASA Astrophysics Data System (ADS)

Čermák, Jan; Koide, Yasuo; Takeuchi, Daisuke; Rezek, Bohuslav

2014-02-01

Spectrally and spatially resolved photovoltages were measured by Kelvin probe force microscopy (KPFM) on a Schottky photo-diode made of a 4 nm thin tungsten-carbide (WC) layer on a 500 nm oxygen-terminated boron-doped diamond epitaxial layer (O-BDD) that was grown on a Ib (100) diamond substrate. The diode was grounded by the sideways ohmic contact (Ti/WC), and the semitransparent Schottky contact was let unconnected. The electrical potentials across the device were measured in dark (only 650 nm LED of KPFM being on), under broad-band white light (halogen lamp), UV (365 nm diode), and deep ultraviolet (deuterium lamp) illumination. Illumination induced shift of the electrical potential remains within 210 mV. We propose that the photovoltage actually corresponds to a shift of Fermi level inside the BDD channel and thereby explains orders of magnitude changes in photocurrent.

Validation of the CoRE Questionnaire for a Medical Journal Peer Review.

PubMed

Doi, Suhail A R; Salzman-Scott, Sherry A; Onitilo, Adedayo A

2016-01-01

If a peer review instrument asks concrete questions (defined as items that can only generate disagreement if reviewers have different degrees of expertise), then questionnaires could become more meaningful in terms of resolving subjectivity thus leading to more reviewer agreement. A concrete item questionnaire with well-chosen questions can also help resolve disagreement when reviewers have the same level of expertise. We have recently created the core-item reviewer evaluation (CoRE) questionnaire for which decision-threshold score levels have been created, but which have not been validated. This prospective validation of these thresholds for the CoRE questionnaire demonstrated strong agreement between reviewer recommendations and their reported score levels when tested prospectively at Clinical Medicine and Research. We conclude that using the CoRE questionnaire will help reduce peer reviewer disagreement. More importantly, when reviewer expertise varies, editors can more easily detect this and decide which opinion reflects the greater expertise.

Empirical investigation into depth-resolution of Magnetotelluric data

NASA Astrophysics Data System (ADS)

Piana Agostinetti, N.; Ogaya, X.

2017-12-01

We investigate the depth-resolution of MT data comparing reconstructed 1D resistivity profiles with measured resistivity and lithostratigraphy from borehole data. Inversion of MT data has been widely used to reconstruct the 1D fine-layered resistivity structure beneath an isolated Magnetotelluric (MT) station. Uncorrelated noise is generally assumed to be associated to MT data. However, wrong assumptions on error statistics have been proved to strongly bias the results obtained in geophysical inversions. In particular the number of resolved layers at depth strongly depends on error statistics. In this study, we applied a trans-dimensional McMC algorithm for reconstructing the 1D resistivity profile near-by the location of a 1500 m-deep borehole, using MT data. We resolve the MT inverse problem imposing different models for the error statistics associated to the MT data. Following a Hierachical Bayes' approach, we also inverted for the hyper-parameters associated to each error statistics model. Preliminary results indicate that assuming un-correlated noise leads to a number of resolved layers larger than expected from the retrieved lithostratigraphy. Moreover, comparing the inversion of synthetic resistivity data obtained from the "true" resistivity stratification measured along the borehole shows that a consistent number of resistivity layers can be obtained using a Gaussian model for the error statistics, with substantial correlation length.

Material quality frontiers of MOVPE grown AlGaAs for minority carrier devices

NASA Astrophysics Data System (ADS)

Heckelmann, S.; Lackner, D.; Dimroth, F.; Bett, A. W.

2017-04-01

In this study, secondary ion mass spectroscopy of oxygen, deep level transient spectroscopy and power dependent relative photoluminescence are compared regarding their ability to resolve differences in AlxGa1-xAs material quality. AlxGa1-xAs samples grown with two different trimethylaluminum sources showing low and high levels of oxygen contamination are compared. As tested in the growth of minority carrier devices, i.e. AlxGa1-xAs solar cells, the two precursors clearly lead to different device characteristics. It is shown that secondary ion mass spectroscopy could not resolve the difference in oxygen concentration, whereas deep level transient spectroscopy and photoluminescence based measurements indicate the influence of the precursor oxygen level on the material quality.

Dynamo Tests for Stratification Below the Core-Mantle Boundary

NASA Astrophysics Data System (ADS)

Olson, P.; Landeau, M.

2017-12-01

Evidence from seismology, mineral physics, and core dynamics points to a layer with an overall stable stratification in the Earth's outer core, possibly thermal in origin, extending below the core-mantle boundary (CMB) for several hundred kilometers. In contrast, energetic deep mantle convection with elevated heat flux implies locally unstable thermal stratification below the CMB in places, consistent with interpretations of non-dipole geomagnetic field behavior that favor upwelling flows below the CMB. Here, we model the structure of convection and magnetic fields in the core using numerical dynamos with laterally heterogeneous boundary heat flux in order to rationalize this conflicting evidence. Strongly heterogeneous boundary heat flux generates localized convection beneath the CMB that coexists with an overall stable stratification there. Partially stratified dynamos have distinctive time average magnetic field structures. Without stratification or with stratification confined to a thin layer, the octupole component is small and the CMB magnetic field structure includes polar intensity minima. With more extensive stratification, the octupole component is large and the magnetic field structure includes intense patches or high intensity lobes in the polar regions. Comparisons with the time-averaged geomagnetic field are generally favorable for partial stratification in a thin layer but unfavorable for stratification in a thick layer beneath the CMB.

Frequency preference and attention effects across cortical depths in the human primary auditory cortex.

PubMed

De Martino, Federico; Moerel, Michelle; Ugurbil, Kamil; Goebel, Rainer; Yacoub, Essa; Formisano, Elia

2015-12-29

Columnar arrangements of neurons with similar preference have been suggested as the fundamental processing units of the cerebral cortex. Within these columnar arrangements, feed-forward information enters at middle cortical layers whereas feedback information arrives at superficial and deep layers. This interplay of feed-forward and feedback processing is at the core of perception and behavior. Here we provide in vivo evidence consistent with a columnar organization of the processing of sound frequency in the human auditory cortex. We measure submillimeter functional responses to sound frequency sweeps at high magnetic fields (7 tesla) and show that frequency preference is stable through cortical depth in primary auditory cortex. Furthermore, we demonstrate that-in this highly columnar cortex-task demands sharpen the frequency tuning in superficial cortical layers more than in middle or deep layers. These findings are pivotal to understanding mechanisms of neural information processing and flow during the active perception of sounds.

Coring the Chesapeake Bay impact crater

USGS Publications Warehouse

Poag, C.W.

2004-01-01

In July 1983, the shipboard scientists of Deep Sea Drilling Project Leg 95 found an unexpected bonus in a core taken 150 kilometers east of Atlantic City, N.J. At Site 612, the scientists recovered a 10-centimeter-thick layer of late Eocene debris ejected from an impact about 36 million years ago. Microfossils and argon isotope ratios from the same layer reveal that the ejecta were part of a broad North American impact debris field, previously known primarily from the Gulf of Mexico and Caribbean Sea. Since that serendipitous beginning, years of seismic reflection profiling, gravity measurements and core drilling have confirmed the source of that strewn field - the Chesapeake Bay impact crater, the largest structure of its kind in the United States, and the sixth-largest impact crater on Earth.

Glacial to interglacial surface nutrient variations of Bering Deep Basins recorded by δ13C and δ15N of sedimentary organic matter

NASA Astrophysics Data System (ADS)

Nakatsuka, Takeshi; Watanabe, Kazuki; Handa, Nobuhiko; Matsumoto, Eiji; Wada, Eitaro

1995-12-01

Stable carbon and nitrogen isotopic ratios (δ13C and δ15N) of organic matter were measured in three sediment cores from deep basins of the Bering Sea to investigate past changes in surface nutrient conditions. For surface water reconstructions, hemipelagic layers in the cores were distinguished from turbidite layers (on the basis of their sedimentary structures and 14C ages) and analyzed for isotopic studies. Although δ13C profiles may have been affected by diagenesis, both δ15N and δ13C values showed common positive anomalies during the last deglaciation. We explain these anomalies as reflecting suppressed vertical mixing and low nutrient concentrations in surface waters caused by injection of meltwater from alpine glaciers around the Bering Sea. Appendix tables are available with entire article on microfiche. Order from American Geophysical Union, 2000 Florida Avenue, N.W., Washington , DC 20009. Document P95-003; $2.50. Payment must accompany order.

The suborbicularis oculi fat (SOOF) and the fascial planes: has everything already been explained?

PubMed

Andretto Amodeo, Chiara; Casasco, Andrea; Icaro Cornaglia, Antonia; Kang, Robert; Keller, Gregory S

2014-01-01

During anatomic and surgical dissections, a connection was seen between the superficial layer of the deep temporal fascia and the prezygomatic area. These findings were in contrast to previous evaluations. This study defines this connection, which is important to understand from both surgical and anatomic standpoints. To define the connection between the superficial layer of the deep temporal fascia and the prezygomatic area and demonstrate the presence of a deep fascial layer in the midface. Anatomical study performed at the Laboratoire d'Anatomie de la Faculté de Médecine de Nice, Sophia Antipolis, France; at the Centre du Don des Corps de l'Université Paris Descartes, Paris, France; and at the Department of Experimental Medicine, Histology, and Embryology Unit of the University of Pavia, Pavia, Italy. Twenty-four hemifaces of 14 white cadavers were dissected to define the relationship between deep temporal fascia and the midface. Four biopsy samples were harvested for histologic analysis. Dissection of 24 hemifaces from the fresh cadavers revealed the following findings. There is a connection of the deep fascia of the temple (superficial layer of deep temporal fascia) to the midface that divides the fat deep to the orbicularis muscle into 2 layers. One layer of fat is the so-called suborbicularis oculi fat (SOOF), which is superficial to the deep fascia, and the other layer of fat (preperiosteal) is deep to the deep fascia and adherent to malar bone. These findings are in contrast to previous anatomical findings. RESULTS In 12 hemifaces, the superficial layer of the deep temporal fascia directly reached the prezygomatic area as a continuous fascial layer. In 16 hemifaces, the superficial sheet of the deep temporal fascia inserted at the level of the zygomatic and lateral orbital rim and continued as a deep fascial layer over the prezygomatic area. In all specimens, a deep fascial layer was present in the prezygomatic-infraorbital area. This deep fascial layer is adherent to the muscles of the infraorbital area, and it divided the fat located deep to the orbicularis oculi muscle into 2 layers: the SOOF and a deeper layer. Histologic examination of the biopsy samples confirmed these findings. This study demonstrates the existence of a deep fascial layer in the midface. This fascia is connected to the superficial layer of the deep temporal fascia, and it divides the fat deep to the orbicularis oculi muscle into 2 layers. This new finding carries interesting implications related to the classic concept of the superficial musculoaponeurotic system. NA.

Numerical Simulation of the Borehole Magnetic Field for Resolving the Possible Rotation of Tectonic Basins and Plates during ICDP and IODP Experiments

NASA Astrophysics Data System (ADS)

Lee, S. M.; Parq, J. H.

2017-12-01

An accurate measurement of magnetic field inside the borehole, together with a right set of paleomagnetic measurements on the recovered core samples, should allow one to resolve important elements such as the rotation of the basin or the plate on which the basin is located. The ability to resolve the rotation of the basin can be crucial during drilling experiments by International Continental Scientific Drilling Program (ICDP) and International Ocean Discovery Program (IODP). A good example where the rotation is a central question is the Philippine Sea Plate, which is thought to have rotated about 90° clockwise during the last 55 million years. Despite the significance, previous borehole magnetometers were not accurate enough to achieve such a goal because, among various technical issues, determining the orientation of the sensor inside the borehole to a very high level of accuracy was not easy. The next-generation (third-generation) borehole magnetometer (3GBM) was developed to overcome this difficulty and to bring paleomagnetic investigations to a new level. Even with the new development, however, there are still concerns whether the new instrument can really resolve the rotation because the magnetic field anomalies generated by the sediment is generally very low. In this paper, we present numerical simulations based on finite element method of the magnetic field inside the borehole that were conducted as part of a test to demonstrate that, despite low levels of magnetization, the magnetic fields can be resolved. The results also served as an important input on the design requirements of the borehole magnetometer. Various cases were considered, including the situation where the sedimentary layer is horizontal and inclined. We also explored the cases where volcanic sills were present within the sedimentary layer as they may provide a greater magnetic signature than having sediment alone, and thus improving our chances of determining the rotation. Simulations are necessary because they provide us useful guidelines for planning a future drill experiment as well as on the first-hand interpretation of the borehole measurement results.

Deep-levels in gallium arsenide for device applications

NASA Astrophysics Data System (ADS)

McManis, Joseph Edward

Defects in semiconductors have been studied for over 40 years as a diagnostic of the quality of crystal growth. In this thesis, we investigate GaAs deep-levels specifically intended for devices. This thesis summarizes our efforts to characterize the near-infrared photoluminescence from deep-levels, study optical transitions via absorption, and fabricate and characterize deep-level light-emitting diodes (LEDs). This thesis also describes the first tunnel diodes which explicitly make use of GaAs deep-levels. Photoluminescence measurements of GaAs deep-levels showed a broad peak around a wavelength extending from 1.0--1.7 mum, which includes important wavelengths for fiber-optic communications (1.3--1.55 mum). Transmission measurements show the new result that very little of the radiative emission is self-absorbed. We measured the deep-level photoluminescence at several temperatures. We are also the first to report the internal quantum efficiency associated with the deep-level transitions. We have fabricated LEDs that, utilize the optical transitions of GaAs deep-levels. The electroluminescence spectra showed a broad peak from 1.0--1.7 mum at low currents, but the spectrum exhibited a blue-shift as the current was increased. To improve device performance, we designed an AlGaAs layer into the structure of the LEDs. The AlGaAs barrier layer acts as a resistive barrier so that the holes in the p-GaAs layer are swept away from underneath the gold p-contact. The AlGaAs layer also reduces the blue-shift by acting as a potential barrier so that only higher-energy holes are injected. We found that the LEDs with AlGaAs were brighter at long wavelengths, which was a significant improvement. Photoluminescence measurements show that the spectral blue-shift is not due to sample heating. We have developed a new physical model to explain the blue-shift: it is caused by Coloumb charging of the deep-centers. We have achieved the first tunnel diodes with which specifically utilize deep-levels in low-temperature-grown (LTG) GaAs. Our devices show the largest ever peak current density in a GaAs tunnel diode at room temperature. Our devices also show significant room-temperature peak-to-valley current ratios. The shape of the current-voltage characteristic and the properties of the optical emission enable us to determine the peak and valley transport mechanisms.

Physical and hydraulic properties of volcanic rocks from Yucca Mountain, Nevada

USGS Publications Warehouse

Flint, Lorraine E.

2003-01-01

A database of physical and hydraulic properties was developed for rocks in the unsaturated zone at Yucca Mountain, Nevada, a site under consideration as a geologic repository for high-level radioactive waste. The 5320 core samples were collected from 23 shallow (<100 m) and 10 deep (500-1000 m) vertical boreholes. Hydrogeologic units have been characterized in the unsaturated zone [Flint, 1998] that represent rocks with ranges of welding, lithophysae, and high and low temperature alteration (as a result of the depositional, cooling, and alterational history of the lithostratigraphic layers). Lithostratigraphy, the hydrogeologic unit, and the corresponding properties are described. In addition, the physical properties of bulk density, porosity, and particle density; the hydraulic properties of saturated hydraulic conductivity and moisture retention characteristics; and the field water content were measured and compiled for each core sample.

X-ray and Neutron Scattering Study of the Formation of Core–Shell-Type Polyoxometalates

DOE PAGES

Yin, Panchao; Wu, Bin; Mamontov, Eugene; ...

2016-02-05

A typical type of core-shell polyoxometalates can be obtained through the Keggin-type polyoxometalate-templated growth of a layer of spherical shell structure of {Mo 72Fe 30}. Small angle X-ray scattering is used to study the structural features and stability of the core-shell structures in aqueous solutions. Time-resolved small angle X-ray scattering is applied to monitor the synthetic reactions and a three-stage formation mechanism is proposed to describe the synthesis of the core-shell polyoxometalates based on the monitoring results. Quasi-elastic and inelastic neutron scattering are used to probe the dynamics of water molecules in the core-shell structures and two different types ofmore » water molecules, the confined and structured water, are observed. These water molecules play an important role in bridging core and shell structures and stabilizing the cluster structures. A typical type of core shell polyoxometalates can be obtained through the Keggin-type polyoxometalate-templated growth of a layer of spherical shell structure of {Mo 72Fe 30}. Small-angle X-ray scattering is used to study the structural features and stability of the core shell structures in aqueous solutions. Time-resolved small-angle X-ray scattering is applied to monitor the synthetic reactions, and a three-stage formation mechanism is proposed to describe the synthesis of the core shell polyoxometalates based on the monitoring results. New protocols have been developed by fitting the X-ray data with custom physical models, which provide more convincing, objective, and completed data interpretation. Quasi-elastic and inelastic neutron scattering are used to probe the dynamics of water molecules in the core shell structures, and two different types of water molecules, the confined and structured water, are observed. These water molecules play an important role in bridging core and shell structures and stabilizing the cluster structures.« less

Large scale magmatic event, magnetic anomalies and ore exploration in northern Norway

NASA Astrophysics Data System (ADS)

Pastore, Z.; Church, N. S.; ter Maat, G. W.; Michels, A.; McEnroe, S. A.; Fichler, C.; Larsen, R. B.

2016-12-01

More than 17000 km3of igneous melts intruded into the deep crust at ca. 560-580 Ma and formed the Seiland Igneous Province (SIP), the largest complex of mafic and ultramafic intrusions in northern Fennoscandia. The original emplacement of the SIP is matter of current discussion. The SIP is now located within the Kalak Nappe Complex (KNC), a part of the Middle Allochthon of the North Norwegian Caledonides. The province is believed to represent a cross section of the deep plumbing system of a large igneous province and it is known for its layered intrusions sharing geological features with large ore-forming exploration provinces. In this study we investigate one of the four major ultramafic complexes of the province, the Reinfjord Complex. This was emplaced during three magmatic events in a time span of 4 Ma, and consists in a cylindrically zoned complex with a slightly younger dunite core (Central Series) surrounded by wehrlite and lherzolite dominated series (Upper and Lower Layered Series). Sulphides are present throughout the complex, and an electromagnetic survey identified a Ni-Cu-and a PGE reef deposit within the dunite, 100 meters below the surface. This discovery increased the ore potential of the complex and subsequently 4 deep drill cores were made. High-resolution magnetic helicopter survey was later followed up with ground magnetic and gravity surveys. Extensive sampling of surface rocks and drill cores were made to measure the rock-magnetic and physical properties of the samples and to explore the subsurface structure of the complex. Here, we developed a magnetic model for the Reinfjord complex integrating petrophysical data from both oriented surface samples and from the deep drill cores, with the new ground magnetic, and helicopter data (SkyTEM survey). A 3D model of the geometry of the ultramafic intrusion is presented and a refinement of the geological interpretation of the Reinfjord ultramafic intrusion.

O 1s core levels in Bi2Sr2CaCu2O8+δ single crystals

NASA Astrophysics Data System (ADS)

Parmigiani, F.; Shen, Z. X.; Mitzi, D. B.; Lindau, I.; Spicer, W. E.; Kapitulnik, A.

1991-02-01

High-quality Bi2Sr2CaCu2O8+δ superconducting single crystals, annealed at different oxygen partial pressures, have been studied using angular-resolved x-ray photoelectron spectroscopy with a resolution higher than that used in any previous study. Two states of the oxygen, separated by ~=0.7 eV, are unambiguously observed. Examining these components at different angles makes it possible to distinguish bulk from surface components. Using this capability we discover that annealing under lower oxygen partial pressure (1 atm) results in oxygen intercalation beneath the Bi-O surface layer of the crystal, whereas for higher-pressure anneals (12 atm) additional oxygen is found on the Bi-O surfaces. This steplike intercalation mechanism is also confirmed by the changes observed in the Cu and Bi core lines as a function of the annealing oxygen partial pressure.

Effects of alterations of the E. coli lipopolysaccharide layer on membrane permeabilization events induced by Cecropin A.

PubMed

Agrawal, Anurag; Weisshaar, James C

2018-04-22

The outermost layer of Gram negative bacteria is composed of a lipopolysaccharide (LPS) network that forms a dense protective hydrophilic barrier against entry of hydrophobic drugs. At low μM concentrations, a large family of cationic polypeptides known as antimicrobial peptides (AMPs) are able to penetrate the LPS layer and permeabilize the outer membrane (OM) and the cytoplasmic membrane (CM), causing cell death. Cecropin A is a well-studied cationic AMP from moth. Here a battery of time-resolved, single-cell microscopy experiments explores how deletion of sugar layers and/or phosphoryl negative charges from the core oligosaccharide layer (core OS) of K12 E. coli alters the timing of OM and CM permeabilization induced by Cecropin A. Deletion of sugar layers, or phosphoryl charges, or both from the core OS shortens the time to the onset of OM permeabilization to periplasmic GFP and also the lag time between OM permeabilization and CM permeabilization. Meanwhile, the 12-h minimum inhibitory concentration (MIC) changes only twofold with core OS alterations. The results suggest a two-step model in which the core oligosaccharide layers act as a kinetic barrier to penetration of Cecropin A to the lipid A outer leaflet of the OM. Once a threshold concentration has built up at the lipid A leaflet, nucleation occurs and the OM is locally permeabilized to GFP and, by inference, to Cecropin A. Whenever Cecropin A permeabilizes the OM, CM permeabilization always follows, and cell growth subsequently halts and never recovers on the 45 min observation timescale. Copyright © 2018 Elsevier B.V. All rights reserved.

Metagenomics Reveals Microbial Community Composition And Function With Depth In Arctic Permafrost Cores

NASA Astrophysics Data System (ADS)

Jansson, J.; Tas, N.; Wu, Y.; Ulrich, C.; Kneafsey, T. J.; Torn, M. S.; Hubbard, S. S.; Chakraborty, R.; Graham, D. E.; Wullschleger, S. D.

2013-12-01

The Arctic is one of the most climatically sensitive regions on Earth and current surveys show that permafrost degradation is widespread in arctic soils. Biogeochemical feedbacks of permafrost thaw are expected to be dominated by the release of currently stored carbon back into the atmosphere as CO2 and CH4. Understanding the dynamics of C release from permafrost requires assessment of microbial functions from different soil compartments. To this end, as part of the Next Generation Ecosystem Experiment in the Arctic, we collected two replicate permafrost cores (1m and 3m deep) from a transitional polygon near Barrow, AK. At this location, permafrost starts from 0.5m in depth and is characterized by variable ice content and higher pH than surface soils. Prior to sectioning, the cores were CT-scanned to determine the physical heterogeneity throughout the cores. In addition to detailed geochemical characterization, we used Illumina MiSeq technology to sequence 16SrRNA genes throughout the depths of the cores at 1 cm intervals. Selected depths were also chosen for metagenome sequencing of total DNA (including phylogenetic and functional genes) using the Illumina HiSeq platform. The 16S rRNA gene sequence data revealed that the microbial community composition and diversity changed dramatically with depth. The microbial diversity decreased sharply below the first few centimeters of the permafrost and then gradually increased in deeper layers. Based on the metagenome sequence data, the permafrost microbial communities were found to contain members with a large metabolic potential for carbon processing, including pathways for fermentation and methanogenesis. The surface active layers had more representatives of Verrucomicrobia (potential methane oxidizers) whereas the deep permafrost layers were dominated by several different species of Actinobacteria. The latter are known to have a diverse metabolic capability and are able to adapt to stress by entering a dormant yet viable state. In addition, several isolates were obtained from different depths throughout the cores, including methanogens from some of the deeper layers. Together these data present a new view of potential geochemical cycles carried out by microorganisms in permafrost and reveal how community members and functions are distributed with depth.

Improvements in the chronology, geochemistry and correlation techniques of tephra in Antarctic ice

NASA Astrophysics Data System (ADS)

Iverson, N. A.; Dunbar, N. W.; McIntosh, W. C.; Pearce, N. J.; Kyle, P. R.

2013-12-01

Visible and crypto tephra layers found in West Antarctic ice provide an excellent record of Antarctic volcanism over the past 100ka. Tephra layers are deposited almost instantaneously across wide areas creating horizons that, if found in several locations, provide 'pinning points' to adjust ice time scales that may otherwise be lacking detailed chronology. Individual tephra layers can have distinct chemical fingerprints allowing them to correlate over great distances. Advances in sample preparation, geochemical analyses (major and trace elements) of fine grained tephra and higher precision 40Ar/39Ar dating of young (<100ka) proximal volcanic deposits are improving an already established tephra record in West Antarctica. Forty three of the potential hundreds of silicate layers found in a recently drilled deep West Antarctic Ice Sheet Divide core (WDC06A) have been analyzed for major elements and a subset for trace elements. Of these layers, at least 16 are homogenous tephra that could be correlated to other ice cores (e.g. Siple Dome, SDMA) and/or to source volcanoes found throughout Antarctica and even extra-continental eruptions (e.g. Sub-Antarctic islands and South America). Combining ice core tephra with those exposed in blue ice areas provide more locations to correlate widespread eruptions. For example, a period of heightened eruptive activity at Mt. Berlin, West Antarctica between 24 and 28ka produced a set of tephra layers that are found in WDC06A and SDMA ice cores, as well as at a nearby blue ice area at Mt. Moulton (BIT-151 and BIT-152). Possible correlative tephra layers are found at ice ages of 26.4, 26.9 and 28.8ka in WDC06A and 26.5, 27.0, and 28.7ka in SDMA cores. The geochemical similarities of major elements in these layers mean that ongoing trace element analyses will be vital to decipher the sequence of events during this phase of activity at Mt. Berlin. Sample WDC06A-2767.117 (ice age of 28.6×1.0ka) appears to correlate to blue ice tephra BIT-152 and to tephra layer SDMA-5683 (ice age of 28.5ka). This tephra layer also appears to be present in blue ice at Mt. Terra Nova on Ross Island, 1400km away, suggesting that it may be a possible to link ice cores in East Antarctica (e.g. Talos Dome and Law Dome). The amount of feldspar in ice core tephra is typically too small to be directly dated by 40Ar/39Ar method, making it very important to geochemically correlate these layers to proximal deposits where more and larger feldspar can be sampled. The correlation of WDC06A-2767.117 to the coarse, proximal BIT-152 provides one such link. The New Mexico Geochronology Research Lab (NMGRL) has two new multi-collector ARGUS VI mass spectrometers that can provide single crystal laser fusion ages that are approximately an order of magnitude more precise than the previous determinations. With these advancements in analytical technology, we hope to improve precision on 'pinning points' in the deep ice cores where annual layer counting becomes less precise.

Execution of deep dipole geoelectrical soundings in areas of geothermal interest. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Patella, D.

It is suggested that deep geoelectrical problems may be resolved by carrying out dipole soundings in the field and applying a quantitative interpretation in the Schlumberger domain. The 'transformation' of original field dipole sounding curves into equivalent Schlumberger curves is outlined for the cases of layered structures and arbitrary underground structures. Theoretical apparent resistivity curves are derived for soundings over bidimensional structures. Following a summary of the geological features of the Travale-Radicondoli geothermal area of Italy, the dipole sounding method employed for this field study and the means of collecting and analyzing the data, are outlined.

Late Quaternary palaeoenvironmental reconstruction of sediment drift accumulation in the Malta Graben (central Mediterranean Sea)

NASA Astrophysics Data System (ADS)

Ferraro, Serena; Sulli, Attilio; Di Stefano, Enrico; Giaramita, Luigi; Incarbona, Alessandro; Graham Mortyn, P.; Sprovieri, Mario; Sprovieri, Rodolfo; Tonielli, Renato; Vallefuoco, Mattia; Zizzo, Elisabetta; Tranchida, Giorgio

2018-06-01

The Malta Graben is a deep tectonic depression in the Sicily Channel, bounded by NW-SE normal faults and filled by thick Pliocene-Quaternary deposits. A previous analysis of a giant piston core (LC09) from the Malta Graben had revealed a wide range of sedimentary features (carbonate turbidites, bioturbated mud and scours), although the chronostratigraphic constraint of the stacking pattern has remained elusive. After establishing a reliable chronological framework based on seven radiocarbon dates for a shorter core from the Malta Graben (ANSIC03-735), a down-core analysis of planktonic foraminifer and coccolith abundance, stable isotopes and sediment grain size was carried out. Since the last glacial maximum, palaeoenvironmental conditions (surface fertility and deep chlorophyll maximum during the last glacial and the Younger Dryas; warm and oligotrophic water masses, with a deep nutricline and intense winter mixing during the Holocene) as well as selected calcareous plankton taxa trends and peaks seem to be similar to those reported for other central and western Mediterranean sites, possibly in spite of a unique response of these areas to late Quaternary climatic fluctuations. Four distinct layers, each tens of centimetres thick, are barren of foraminifers but not of coccoliths. Morphobathymetric data as well as new high-resolution and high-penetration seismic profiles show that prolonged contouritic activity has persisted on the western side of the Malta Graben. It is thus likely that layers barren of foraminifers are due to the overflow of fine-grained (clayey) material beyond drift channel dikes.

Late Quaternary palaeoenvironmental reconstruction of sediment drift accumulation in the Malta Graben (central Mediterranean Sea)

NASA Astrophysics Data System (ADS)

Ferraro, Serena; Sulli, Attilio; Di Stefano, Enrico; Giaramita, Luigi; Incarbona, Alessandro; Graham Mortyn, P.; Sprovieri, Mario; Sprovieri, Rodolfo; Tonielli, Renato; Vallefuoco, Mattia; Zizzo, Elisabetta; Tranchida, Giorgio

2018-03-01

The Malta Graben is a deep tectonic depression in the Sicily Channel, bounded by NW-SE normal faults and filled by thick Pliocene-Quaternary deposits. A previous analysis of a giant piston core (LC09) from the Malta Graben had revealed a wide range of sedimentary features (carbonate turbidites, bioturbated mud and scours), although the chronostratigraphic constraint of the stacking pattern has remained elusive. After establishing a reliable chronological framework based on seven radiocarbon dates for a shorter core from the Malta Graben (ANSIC03-735), a down-core analysis of planktonic foraminifer and coccolith abundance, stable isotopes and sediment grain size was carried out. Since the last glacial maximum, palaeoenvironmental conditions (surface fertility and deep chlorophyll maximum during the last glacial and the Younger Dryas; warm and oligotrophic water masses, with a deep nutricline and intense winter mixing during the Holocene) as well as selected calcareous plankton taxa trends and peaks seem to be similar to those reported for other central and western Mediterranean sites, possibly in spite of a unique response of these areas to late Quaternary climatic fluctuations. Four distinct layers, each tens of centimetres thick, are barren of foraminifers but not of coccoliths. Morphobathymetric data as well as new high-resolution and high-penetration seismic profiles show that prolonged contouritic activity has persisted on the western side of the Malta Graben. It is thus likely that layers barren of foraminifers are due to the overflow of fine-grained (clayey) material beyond drift channel dikes.

Biomechanical consequences of running with deep core muscle weakness.

PubMed

Raabe, Margaret E; Chaudhari, Ajit M W

2018-01-23

The deep core muscles are often neglected or improperly trained in athletes. Improper function of this musculature may lead to abnormal spinal loading, muscle strain, or injury to spinal structures, all of which have been associated with increased low back pain (LBP) risk. The purpose of this study was to identify potential strategies used to compensate for weakness of the deep core musculature during running and to identify accompanying changes in compressive and shear spinal loads. Kinematically-driven simulations of overground running were created for eight healthy young adults in OpenSim at increasing levels of deep core muscle weakness. The deep core muscles (multifidus, quadratus lumborum, psoas, and deep fascicles of the erector spinae) were weakened individually and together. The superficial longissimus thoracis was a significant compensator for 4 out of 5 weakness conditions (p < 0.05). The deep erector spinae required the largest compensations when weakened individually (up to a 45 ± 10% increase in compensating muscle force production, p = 0.004), revealing it may contribute most to controlling running kinematics. With complete deep core muscle weakness, peak anterior shear loading increased on all lumbar vertebrae (up to 19%, p = 0.001). Additionally, compressive spinal loading increased on the upper lumbar vertebrae (up to 15%, p = 0.007) and decreased on the lower lumbar vertebrae (up to 8%, p = 0.008). Muscular compensations may increase risk of muscular fatigue or injury and increased spinal loading over numerous gait cycles may result in damage to spinal structures. Therefore, insufficient strength of the deep core musculature may increase a runner's risk of developing LBP. Copyright © 2017 Elsevier Ltd. All rights reserved.

2D layered transport properties from topological insulator Bi2Se3 single crystals and micro flakes

PubMed Central

Chiatti, Olivio; Riha, Christian; Lawrenz, Dominic; Busch, Marco; Dusari, Srujana; Sánchez-Barriga, Jaime; Mogilatenko, Anna; Yashina, Lada V.; Valencia, Sergio; Ünal, Akin A.; Rader, Oliver; Fischer, Saskia F.

2016-01-01

Low-field magnetotransport measurements of topological insulators such as Bi2Se3 are important for revealing the nature of topological surface states by quantum corrections to the conductivity, such as weak-antilocalization. Recently, a rich variety of high-field magnetotransport properties in the regime of high electron densities (∼1019 cm−3) were reported, which can be related to additional two-dimensional layered conductivity, hampering the identification of the topological surface states. Here, we report that quantum corrections to the electronic conduction are dominated by the surface states for a semiconducting case, which can be analyzed by the Hikami-Larkin-Nagaoka model for two coupled surfaces in the case of strong spin-orbit interaction. However, in the metallic-like case this analysis fails and additional two-dimensional contributions need to be accounted for. Shubnikov-de Haas oscillations and quantized Hall resistance prove as strong indications for the two-dimensional layered metallic behavior. Temperature-dependent magnetotransport properties of high-quality Bi2Se3 single crystalline exfoliated macro and micro flakes are combined with high resolution transmission electron microscopy and energy-dispersive x-ray spectroscopy, confirming the structure and stoichiometry. Angle-resolved photoemission spectroscopy proves a single-Dirac-cone surface state and a well-defined bulk band gap in topological insulating state. Spatially resolved core-level photoelectron microscopy demonstrates the surface stability. PMID:27270569

Effects of Overshooting Convection on the Tropical Tropopause Layer Temperature Structure and Trends

NASA Astrophysics Data System (ADS)

Ramsay, H.; Sherwood, S. C.; Singh, M.

2017-12-01

A series of idealised cloud-resolving simulations are performed to investigate the impact of spatial/and or temporal inhomogeneity of tropical deep convection (in particular, convective overshoots that penetrate well into the tropical tropopause layer) on upper tropospheric/lower stratospheric (UTLS) temperature structure and trends under surface warming. Two sets of simulations are studied: one in which the sea surface temperature (SST) is increased uniformly, and a second in which convective updrafts are intensified periodically by specifying a diurnally-varying skin temperature. All simulations are run to radiative-convective equilibrium so as to capture the mean-state response at time scales of weeks to months. We discuss the implications of our results for the interpretation of observed and modelled trends in the UTLS, as well as the diurnal cycle of tropical deep convection.

Inner Core Structure of Hurricane Alicia from Airborne Doppler Radar Observations.

NASA Astrophysics Data System (ADS)

Marks, Frank D., Jr.; Houze, Robert A., Jr.

1987-05-01

Airborne Doppler radar measurements are used to determine the horizontal winds, vertical air motions, radar reflectivity and hydrometer fallspeeds over much of the inner-core region (within 40 km of the eye) of Hurricane Alicia (1983). The reconstructed flow field is more complete and detailed than any obtained previously. The data show both the primary (azimuthal) and secondary (radial-height) circulations. The primary circulation was characterized by an outward sloping maximum of tangential wind. The secondary circulation was characterized by a deep layer of radial inflow in the lower troposphere and a layer of intense outflow above 10 km altitude. The rising branch of the secondary circulation was located in the eyewall and sloped radially outward. Discrete convective-scale bubbles of more intense upward motion were superimposed on this mean rising current, and convective-scale downdrafts were located throughout and below the core of maximum precipitation in the eyewall.Precipitation particles in the eyewall rainshaft circulated 18-20 km downwind as they fell, consistent with the typical upwind slope with increasing altitude of eyewall precipitation cores Outside the eyewall, the precipitation was predominantly stratiform. A radar bright band was evident at the melting level. Above the melting level, ice particles were advected into the stratiform region from the upper levels of the eyewall and drifted downward through a mesoscale region of ascent. Hypothetical precipitation particle trajectories showed that as these particles fell slowly through the mesoscale updraft toward the melting level, they were carried azimuthally as many as 1 1/2 times around the storm. During this spiraling descent, the particles evidently grew vigorously. The amount of water condensed by the ambient mesoscale ascent exceeded that transported into the stratiform region by the eyewall outflow by a factor of 3. As the particles fell into the lower troposphere, they entered a mesoscale region of subsidence, the top of which coincided with the radar bright band.

Deep Visual Attention Prediction

NASA Astrophysics Data System (ADS)

Wang, Wenguan; Shen, Jianbing

2018-05-01

In this work, we aim to predict human eye fixation with view-free scenes based on an end-to-end deep learning architecture. Although Convolutional Neural Networks (CNNs) have made substantial improvement on human attention prediction, it is still needed to improve CNN based attention models by efficiently leveraging multi-scale features. Our visual attention network is proposed to capture hierarchical saliency information from deep, coarse layers with global saliency information to shallow, fine layers with local saliency response. Our model is based on a skip-layer network structure, which predicts human attention from multiple convolutional layers with various reception fields. Final saliency prediction is achieved via the cooperation of those global and local predictions. Our model is learned in a deep supervision manner, where supervision is directly fed into multi-level layers, instead of previous approaches of providing supervision only at the output layer and propagating this supervision back to earlier layers. Our model thus incorporates multi-level saliency predictions within a single network, which significantly decreases the redundancy of previous approaches of learning multiple network streams with different input scales. Extensive experimental analysis on various challenging benchmark datasets demonstrate our method yields state-of-the-art performance with competitive inference time.

Core rotational dynamics and geological events

PubMed

Greff-Lefftz; Legros

1999-11-26

A study of Earth's fluid core oscillations induced by lunar-solar tidal forces, together with tidal secular deceleration of Earth's axial rotation, shows that the rotational eigenfrequency of the fluid core and some solar tidal waves were in resonance around 3.0 x 10(9), 1.8 x 10(9), and 3 x 10(8) years ago. The associated viscomagnetic frictional power at the core boundaries may be converted into heat and would destabilize the D" thermal layer, leading to the generation of deep-mantle plumes, and would also increase the temperature at the fluid core boundaries, perturbing the core dynamo process. Such phenomena could account for large-scale episodes of continental crust formation, the generation of flood basalts, and abrupt changes in geomagnetic reversal frequency.

Will Deep Impact Make a Splash?

NASA Technical Reports Server (NTRS)

Sheldon, Robert B.; Hoover, Richard B.

2005-01-01

Recent cometary observations from spacecraft flybys support the hypothesis that short-period comets have been substantially modified by the presence of liquid water. Such a model can resolve many outstanding questions of cometary dynamics, as well as the differences between the flyby observations and the dirty snowball paradigm. The model also predicts that the Deep Impact mission, slated for a July 4, 2005 collision with Comet Temple-1, will encounter a layered, heterogenous nucleus with subsurface liquid water capped by dense crust. Collision ejecta will include not only vaporized material, but liquid water and large pieces of crust. Since the water will immediately boil, we predict that the water vapor signature of Deep Impact may be an order of magnitude larger than that expected from collisional vaporization alone.

Searching for Last Glacial Deep-Sea Polar Carbonates in the Ross Sea Continental slope and Their Relevance to Chronological Constraints

NASA Astrophysics Data System (ADS)

Brambati, A.; Bonaccorsi, R.; Quaia, T.; Busetti, M.

2003-12-01

Ice-proximal glacial marine sediments from the Antarctic continental margin retain ice rafting events as proxy record for change in the volume and extension of the Antarctic ice sheet throughout glacial-interglacial cycles. However, the sedimentary sequences from the Ross Sea continental margin remain relatively poorly understood and most research has been focused mainly on continental shelf sequences during the last past decades. We present a data set (i.e., X-ray lithology, Multi Sensor Core Logger physical data, and preservation of biogenic carbonates), obtained from six deep-sea cores (1991-1999 Italian Antarctic Research Programme, PNRA - Summer cruises). Specifically, the cores were collected from a) the central Eastern sector (i.e., Core ANTA95-89C, depth: 2056 m, length: 401 cm and Core ANTA99-c22, depth: 2650 m, length: 851 cm); b) the central Western sector (i.e., Core ANTA99-c23; water depth: 2158 m, length: 548 cm; and ANTA99-c24, water depth: 2750 m, length: 811 cm); and c) the North Western sector (i.e., Core ANTA91-08C, and ANTA91-02C) of the Ross Sea Continental slope. Well-preserved calcareous foraminifers (N. pachyderma, sx) in coarse-grained IRD materials sparsely occur and/or are concentrated in discrete layers (i.e., up to 22 cm-thick) of at least three cores (i.e., Cores ANTA91-08, ANTA91-02, and ANTA95-89C, e.g., at 217-238 cm-depth). Some carbonate layers were deposited during a period of time bracketing Stage3/Stage2. In Core 89C foraminifers are associated to multiple ice rafting episodes and likely occurred with oceanographic changes in the properties of slope water masses. The search of well-preserved, in situ-deposited, polar carbonates is demanded for a reliable C-14 AMS dating of late Pleistocene events in the Ross Sea.

Hydroclimatic variability in the Levant during the early last glacial (˜ 117-75 ka) derived from micro-facies analyses of deep Dead Sea sediments

NASA Astrophysics Data System (ADS)

Neugebauer, I.; Schwab, M. J.; Waldmann, N. D.; Tjallingii, R.; Frank, U.; Hadzhiivanova, E.; Naumann, R.; Taha, N.; Agnon, A.; Enzel, Y.; Brauer, A.

2016-01-01

The new sediment record from the deep Dead Sea basin (ICDP core 5017-1) provides a unique archive for hydroclimatic variability in the Levant. Here, we present high-resolution sediment facies analysis and elemental composition by micro-X-ray fluorescence (µXRF) scanning of core 5017-1 to trace lake levels and responses of the regional hydroclimatology during the time interval from ca. 117 to 75 ka, i.e. the transition between the last interglacial and the onset of the last glaciation. We distinguished six major micro-facies types and interpreted these and their alterations in the core in terms of relative lake level changes. The two end-member facies for highest and lowest lake levels are (a) up to several metres thick, greenish sediments of alternating aragonite and detrital marl laminae (aad) and (b) thick halite facies, respectively. Intermediate lake levels are characterised by detrital marls with varying amounts of aragonite, gypsum or halite, reflecting lower-amplitude, shorter-term variability. Two intervals of pronounced lake level drops occurred at ˜ 110-108 ± 5 and ˜ 93-87 ± 7 ka. They likely coincide with stadial conditions in the central Mediterranean (Melisey I and II pollen zones in Monticchio) and low global sea levels during Marine Isotope Stage (MIS) 5d and 5b. However, our data do not support the current hypothesis of an almost complete desiccation of the Dead Sea during the earlier of these lake level low stands based on a recovered gravel layer. Based on new petrographic analyses, we propose that, although it was a low stand, this well-sorted gravel layer may be a vestige of a thick turbidite that has been washed out during drilling rather than an in situ beach deposit. Two intervals of higher lake stands at ˜ 108-93 ± 6 and ˜ 87-75 ± 7 ka correspond to interstadial conditions in the central Mediterranean, i.e. pollen zones St. Germain I and II in Monticchio, and Greenland interstadials (GI) 24+23 and 21 in Greenland, as well as to sapropels S4 and S3 in the Mediterranean Sea. These apparent correlations suggest a close link of the climate in the Levant to North Atlantic and Mediterranean climates during the time of the build-up of Northern Hemisphere ice shields in the early last glacial period.

Birefringence and vascular imaging of in vivo human skin by Jones-matrix optical coherence tomography

NASA Astrophysics Data System (ADS)

Li, En; Makita, Shuichi; Hong, Young-Joo; Kasaragod, Deepa; Yasuno, Yoshiaki

2017-02-01

A customized 1310-nm Jones-matrix optical coherence tomography (JM-OCT) for dermatological investigation was constructed and used for in vivo normal human skin tissue imaging. This system can simultaneously measure the threedimensional depth-resolved local birefringence, complex-correlation based OCT angiography (OCT-A), degree-ofpolarization- uniformity (DOPU) and scattering OCT intensity. By obtaining these optical properties of tissue, the morphology, vasculature, and collagen content of skin can be deduced and visualized. Structures in the deep layers of the epithelium were observed with depth-resolved local birefringence and polarization uniformity images. These results suggest high diagnostic and investigative potential of JM-OCT for dermatology.

The effects of deep convection on the concentration and size distribution of aerosol particles within the upper troposphere: A case study

NASA Astrophysics Data System (ADS)

Yin, Yan; Chen, Qian; Jin, Lianji; Chen, Baojun; Zhu, Shichao; Zhang, Xiaopei

2012-11-01

A cloud resolving model coupled with a spectral bin microphysical scheme was used to investigate the effects of deep convection on the concentration and size distribution of aerosol particles within the upper troposphere. A deep convective storm that occurred on 1 December, 2005 in Darwin, Australia was simulated, and was compared with available radar observations. The results showed that the radar echo of the storm in the developing stage was well reproduced by the model. Sensitivity tests for aerosol layers at different altitudes were conducted in order to understand how the concentration and size distribution of aerosol particles within the upper troposphere can be influenced by the vertical transport of aerosols as a result of deep convection. The results indicated that aerosols originating from the boundary layer can be more efficiently transported upward, as compared to those from the mid-troposphere, due to significantly increased vertical velocity through the reinforced homogeneous freezing of droplets. Precipitation increased when aerosol layers were lofted at different altitudes, except for the case where an aerosol layer appeared at 5.4-8.0 km, in which relatively more efficient heterogeneous ice nucleation and subsequent Wegener-Bergeron-Findeisen process resulted in more pronounced production of ice crystals, and prohibited the formation of graupel particles via accretion. Sensitivity tests revealed, at least for the cases considered, that the concentration of aerosol particles within the upper troposphere increased by a factor of 7.71, 5.36, and 5.16, respectively, when enhanced aerosol layers existed at 0-2.2 km, 2.2-5.4 km, and 5.4-8.0 km, with Aitken mode and a portion of accumulation mode (0.1-0.2μm) particles being the most susceptible to upward transport.

Linear Dichroism in Angle-Resolved Core-Level Photoemission Spectra Reflecting 4f Ground-State Symmetry of Strongly Correlated Cubic Pr Compounds

NASA Astrophysics Data System (ADS)

Hamamoto, Satoru; Fujioka, Shuhei; Kanai, Yuina; Yamagami, Kohei; Nakatani, Yasuhiro; Nakagawa, Koya; Fujiwara, Hidenori; Kiss, Takayuki; Higashiya, Atsushi; Yamasaki, Atsushi; Kadono, Toshiharu; Imada, Shin; Tanaka, Arata; Tamasaku, Kenji; Yabashi, Makina; Ishikawa, Tetsuya; Matsumoto, Keisuke T.; Onimaru, Takahiro; Takabatake, Toshiro; Sekiyama, Akira

2017-12-01

We report experimentally observed linear dichroism in angle-resolved core-level photoemission spectra of PrIr2Zn20 and PrB6 with cubic symmetry. The different anisotropic 4f charge distributions between the compounds due to the crystalline-electric-field splitting are responsible for the difference in the linear dichroism, which has been verified by spectral simulations with the full multiplet theory for a single-site Pr3+ ion with cubic symmetry. The observed linear dichroism and polarization-dependent spectra in two different photoelectron directions for PrIr2Zn20 are reproduced by theoretical analysis for the Γ3 ground state, whereas those of the Pr 3d and 4d core levels indicate the Γ5 ground state for PrB6.

Detection of deep stratospheric intrusions by cosmogenic 35S

PubMed Central

Su, Lin; Shaheen, Robina; Fung, Jimmy C. H.; Thiemens, Mark H.

2016-01-01

The extent to which stratospheric intrusions on synoptic scales influence the tropospheric ozone (O3) levels remains poorly understood, because quantitative detection of stratospheric air has been challenging. Cosmogenic 35S mainly produced in the stratosphere has the potential to identify stratospheric air masses at ground level, but this approach has not yet been unambiguously shown. Here, we report unusually high 35S concentrations (7,390 atoms m−3; ∼16 times greater than annual average) in fine sulfate aerosols (aerodynamic diameter less than 0.95 µm) collected at a coastal site in southern California on May 3, 2014, when ground-level O3 mixing ratios at air quality monitoring stations across southern California (43 of 85) exceeded the recently revised US National Ambient Air Quality Standard (daily maximum 8-h average: 70 parts per billion by volume). The stratospheric origin of the significantly enhanced 35S level is supported by in situ measurements of air pollutants and meteorological variables, satellite observations, meteorological analysis, and box model calculations. The deep stratospheric intrusion event was driven by the coupling between midlatitude cyclones and Santa Ana winds, and it was responsible for the regional O3 pollution episode. These results provide direct field-based evidence that 35S is an additional sensitive and unambiguous tracer in detecting stratospheric air in the boundary layer and offer the potential for resolving the stratospheric influences on the tropospheric O3 level. PMID:27655890

Early Earth differentiation [rapid communication

NASA Astrophysics Data System (ADS)

Walter, Michael J.; Trønnes, Reidar G.

2004-09-01

The birth and infancy of Earth was a time of profound differentiation involving massive internal reorganization into core, mantle and proto-crust, all within a few hundred million years of solar system formation ( t0). Physical and isotopic evidence indicate that the formation of iron-rich cores generally occurred very early in planetesimals, the building blocks of proto-Earth, within about 3 million years of t0. The final stages of terrestrial planetary accretion involved violent and tremendously energetic giant impacts among core-segregated Mercury- to Mars-sized objects and planetary embryos. As a consequence of impact heating, the early Earth was at times partially or wholly molten, increasing the likelihood for high-pressure and high-temperature equilibration among core- and mantle-forming materials. The Earth's silicate mantle harmoniously possesses abundance levels of the siderophile elements Ni and Co that can be reconciled by equilibration between iron alloy and silicate at conditions comparable to those expected for a deep magma ocean. Solidification of a deep magma ocean possibly involved crystal-melt segregation at high pressures, but subsequent convective stirring of the mantle could have largely erased nascent layering. However, primitive upper mantle rocks apparently have some nonchondritic major and trace element refractory lithophile element ratios that can be plausibly linked to early mantle differentiation of ultra-high-pressure mantle phases. The geochemical effects of crystal fractionation in a deep magma ocean are partly constrained by high-pressure experimentation. Comparison between compositional models for the primitive convecting mantle and bulk silicate Earth generally allows, and possibly favors, 10-15% total fractionation of a deep mantle assemblage comprised predominantly of Mg-perovskite and with minor but geochemically important amounts of Ca-perovskite and ferropericlase. Long-term isolation of such a crystal pile is generally consistent with isotopic constraints for time-integrated Sm/Nd and Lu/Hf ratios in the modern upper mantle and might account for the characteristics of some mantle isotope reservoirs. Although much remains to be learned about the earliest formative period in the Earth's development, a convergence of theoretical, physical, isotopic and geochemical arguments is beginning to yield a self-consistent portrait of the infant Earth.

Genesis of Pre-Hurricane Felix (2007). Part 2; Warm Core Formation, Precipitation Evolution, and Predictability

NASA Technical Reports Server (NTRS)

Wang, zhuo; Montgomery M. T.; Dunkerton, T. J.

2010-01-01

This is the second of a two-part study examining the simulated formation of Atlantic Hurricane Felix (2007) in a cloud-representing framework. Here several open issues are addressed concerning the formation of the storm's warm core, the evolution and respective contribution of stratiform versus convective precipitation within the parent wave's pouch, and the sensitivity of the development pathway reported in Part I to different model physics options and initial conditions. All but one of the experiments include ice microphysics as represented by one of several parameterizations, and the partition of convective versus stratiform precipitation is accomplished using a standard numerical technique based on the high-resolution control experiment. The transition to a warm-core tropical cyclone from an initially cold-core, lower tropospheric wave disturbance is analyzed first. As part of this transformation process, it is shown that deep moist convection is sustained near the pouch center. Both convective and stratiform precipitation rates increase with time. While stratiform precipitation occupies a larger area even at the tropical storm stage, deep moist convection makes a comparable contribution to the total rain rate at the pregenesis stage, and a larger contribution than stratiform processes at the storm stage. The convergence profile averaged near the pouch center is found to become dominantly convective with increasing deep moist convective activity there. Low-level convergence forced by interior diabatic heating plays a key role in forming and intensifying the near-surface closed circulation, while the midlevel convergence associated with stratiform precipitation helps to increase the midlevel circulation and thereby contributes to the formation and upward extension of a tropospheric-deep cyclonic vortex. Sensitivity tests with different model physics options and initial conditions demonstrate a similar pregenesis evolution. These tests suggest that the genesis location of a tropical storm is largely controlled by the parent wave's critical layer, whereas the genesis time and intensity of the protovortex depend on the details of the mesoscale organization, which is less predictable. Some implications of the findings are discussed.

MULTILEVEL ISCHEMIA IN DISORGANIZATION OF THE RETINAL INNER LAYERS ON PROJECTION-RESOLVED OPTICAL COHERENCE TOMOGRAPHY ANGIOGRAPHY.

PubMed

Onishi, Alex C; Ashraf, Mohammed; Soetikno, Brian T; Fawzi, Amani A

2018-04-10

To examine the relationship between ischemia and disorganization of the retinal inner layers (DRIL). Cross-sectional retrospective study of 20 patients (22 eyes) with diabetic retinopathy presenting to a tertiary academic referral center, who had DRIL on structural optical coherence tomography (OCT) using Spectralis HRA + OCT (Heidelberg Engineering, Heidelberg, Germany) and OCT angiography with XR Avanti (Optovue Inc, Fremont, CA) on the same day. Optical coherence tomography angiography images were further processed to remove flow signal projection artifacts using a software algorithm adapted from recent studies. Retinal capillary perfusion in the superficial capillary plexuses, middle capillary plexuses, and deep capillary plexuses, as well as integrity of the photoreceptor lines on OCT was compared in areas with DRIL to control areas without DRIL in the same eye. Qualitative assessment of projection-resolved OCT angiography of eyes with DRIL on structural OCT demonstrated significant perfusion deficits compared with adjacent control areas (P < 0.001). Most lesions (85.7%) showed superimposed superficial capillary plexus and/or middle capillary plexus nonperfusion in addition to deep capillary plexus nonflow. Areas of DRIL were significantly associated with photoreceptor disruption (P = 0.035) compared with adjacent DRIL-free areas. We found that DRIL is associated with multilevel retinal capillary nonperfusion, suggesting an important role for ischemia in this OCT phenotype.

Use of Synthetic Osteochondral Implants to Treat Bilateral Shoulder Osteochondritis Dissecans in a Dog.

PubMed

Danielski, Alan; Farrell, Michael

2018-06-20

 An 8-month-old American Bulldog was presented for assessment of bilateral thoracic limb lameness. Computed tomographic imaging revealed large, deep osteochondritis dissecans lesions in both humeral heads.  The osteochondritis dissecans lesions were debrided and the exposed subchondral defects were prepared to receive synthetic grafts. Circular implants consisting of a surface layer of polycarbonate urethane and a deep layer of lattice-type titanium were implanted into the osteochondral defects to reconstruct the articular surface topography. Follow-up clinical examination 1.5, 3 and 9months postoperatively revealed a lack of signs of shoulder pain and resolution of thoracic limb lameness. Nine-month follow-up radiographs showed radiographic evidence of osteointegration of both implants.  Synthetic osteochondral implantation in the caudocentral aspect of the humeral head appeared technically feasible and effective in resolving lameness caused by humeral head osteochondritis dissecans. Schattauer GmbH Stuttgart.

Resolving the intermediate and deep advective flows in the Indian Ocean by using temperature, salinity, oxygen and phosphate data: the interplay of biogeochemical and geophysical tracers

NASA Astrophysics Data System (ADS)

Metzl, N.; Moore, B.; Poisson, A.

1990-10-01

For computing large-scale advective flow in the Indian ocean (including the Indian-Antarctic sector), we use a box-model approach and perturbed inverse method. The top 400 meters is not considered in this study, in view of the dominant seasonal dynamics. We use 1244 hydrographic stations, to estimate mean values for temperature, salinity, oxygen and phosphate concentratons. Fifty perturbed inversions of steady-state tracers conservations and thermal-wind equations are done using box-averages standard deviations and a 25% perturbation on the thermal-wind coefficients. The mean solutions represent the large-scale advective flow and carbon-decomposition rates in which we are interested. Solutions with only advective processes are first considered. The broad features of the circulation in the Indian Ocean are resolved in the intermediate levels, but in deeper layers, an input from North Atlantic Deep Water (NADW) is not apparent. Inspection of oxygen and phosphate residuals reveals a biochemical signal. Therefore, we introduce in the oxygen and phosphate budgets a linear parameterization (Redfield ratios) for the organic-decomposition processes. The structure of the residuals for oxygen and phosphate is changed in that the biochemical signal vanishes. The advective solutions are nearly the same in intermediate waters; however, in deep layers the new solution shows an inflow of 11 (±8) Sv of NADW south of Africa. The calculated total organic decomposition of 0.93 (±0.25) 10 15g C year -1 is about one fifth of the estimated world ocean amount, but total residuals of oxygen and phosphate lead to an unexplained 0.5 10 15g C year -1 missing carbon sink. The new solution does contain unrealistic elements (e.g. large deep flow between Indonesia and Australia). Finally, to investigate this last result, we add one advective constraint at the Indonesia-Australia boundary. This addition changes the circulation in the northeastern part of the Indian Ocean. The circumpolar flow between 400 m and 27.65 (σo) remains unchanged at 20°E and at 80°E; however, at 130°E the constraint increases the advective flow by 20%. Total organic-carbon-decomposition rates are not affected by the additional inflow from Indonesia.

Shape, zonal winds and gravitational field of Jupiter: a fully self-consistent, multi-layered model

NASA Astrophysics Data System (ADS)

Schubert, Gerald; Kong, Dali; Zhang, Keke

2016-10-01

We construct a three-dimensional, finite-element, fully self-consistent, multi-layered,non-spheroidal model of Jupiter consisting of an inner core, a metallic electrically conducting dynamo region and an outer molecular electrically insulating envelope. We assume that the Jovian zonal winds are on cylinders parallel to the rotation axis but, due to the effect of magnetic braking, are confined within the outer molecular envelope. Two related calculations are carried out. The first provides an accurate description of the shape and internal density profile of Jupiter; the effect of rotational distortion is not treated as a small perturbation on a spherically symmetric state. This calculation determines the density, size and shape of the inner core, the irregular shape of the 1-bar pressure level, and the internal structure of Jupiter; the full effect of rotational distortion, without the influence of the zonal winds, is accounted for. Our multi-layered model is able to produce the known mass, the known equatorial and polar radii, and the known zonal gravitational coefficient J2 of Jupiter within their error bars; it also yields the coefficients J4 and J6 within about 5% accuracy, and the core equatorial radius 0.09RJ containing 3.73 Earth masses.The second calculation determines the variation of the gravitational field caused solely by the effect of the zonal winds on the rotationally distorted non-spheroidal Jupiter. Four different cases, ranging from a deep wind profile to a very shallow profile, are considered and implications for accurate interpretation of the zonal gravitational coefficients expected from the Juno mission are discussed.

Entrainment vs. Dilution in Tropical Deep Convection

NASA Astrophysics Data System (ADS)

Hannah, W.

2017-12-01

The distinction between entrainment and dilution is investigated with cloud resolving simulations of deep convection in a tropical environment. A method for estimating the rate of dilution by entrainment and detrainment is calculated for a series of bubble simulations with a range of initial radii. Entrainment generally corresponds to dilution of convection, but the two quantities are not well correlated. Core dilution by entrainment is significantly reduced by the presence of a shell of moist air around the core. Entrainment contributes significantly to the total net dilution, but detrainment and the various source/sink terms play large roles depending on the variable in question. Detrainment has a concentrating effect on average that balances out the dilution by entrainment. The experiments are also used to examine whether entrainment or dilution scale with cloud radius. The results support a weak negative relationship for dilution, but not for entrainment. The sensitivity to resolution is briefly discussed. A toy Lagrangian thermal model is used to demonstrate the importance of the cloud shell as a thermodynamic buffer to reduce the dilution of the core by entrainment. The results suggest that explicit cloud heterogeneity may be a useful consideration for future convective parameterization development.

Terrestrial Ice Sheets: Studies of Climate History, Internal Structure, Surface, and Bedrock

NASA Astrophysics Data System (ADS)

Thorsteinsson, Th.; Kipfstuhl, J.; Nixdorf, U.; Oerter, H.; Miller, H.; Fritsche, D.; Jung-Rothenhaeusler, F.; Mayer, C.; Schwager, M.; Wilhelms, F.; Steinhage, D.; Goektas, F.

1998-01-01

Recently drilled deep ice cores from Central Greenland (GRIP and GISP2) provide the most detailed results available on climatic variation in the northern hemisphere during the last 100,000 years, a period that includes the Holocene (0-11.5 ka) and most of the Wisconsin glacial period. Summer-winter variation in various physical and chemical properties of polar ice allows dating of ice cores by annual layer counting. Several such methods are currently being employed on an ice core drilled by the new North Greenland Ice Core Project (NGRIP), which is aimed at extending the Greenland ice palaeoclimatic record through the last interglacial, the Eemian. Two examples will be presented: (1) visual and photographic studies of seasonal variation in stratigraphic layering, crystal size, air bubble and clathrate concentration, and (2) studies of electric stratigraphy, using the method of dielectric profiling (DEP). This method records the AC conductivity of ice cores, which is negatively correlated with the concentration of airborne dust in the ice but positively correlated with volcanic and marine aerosols. Comprehensive surface traverse programs, which include shallow coring and ice velocity measurements, have recently been carried out by the Alfred Wegener Institute in previously little-investigated regions of Greenland and Antarctica. Serving partly as reconnaissance prior to deep drilling projects, such studies also help to reduce considerable uncertainties in the mass balance of the two large polar ice sheets and thus in their estimated response to climate change. Main results of a recent traverse in North Greenland include the following: (1) A new map of the accumulation distribution on the ice sheet indicates a large low-accumulation region in Northeast-Greenland; (2) North Greenland records show significantly greater climatic variability during the last 500 yr than corresponding records from the southern part of the ice sheet; and (3) data on variation in accumulation rates do not indicate a definite trend in the region during this century. The Alfred Wegener Institute has in recent years employed both airborne and ground-penetrating ice radar systems to map the bedrock around deep drilling sites in Central and North Greenland, as well as in a planned Antarctic site in Dronning Maud Land. The radar also records shallow and deep internal echoes, caused by rapid variation in density and ice acidity in layers of certain ages, allowing isochrones to be traced over wide reaches of the ice sheet. Disturbances in regular stratigraphic layering, due to ice flow over an irregular bed, were observed in the lowest 200-300 m of the GRIP and GISP2 ice cores. Since the aim of the new NGRIP coring program is to obtain an ice core reaching further back in time than the Central Greenland cores, this site was chosen in a region where the bedrock is relatively flat. Echo-sounding surveys between GRIP and NGREP show that the isochrones lie 100-200 in higher above the bed at NGRIP, indicating that the Eemian layer is unlikely to have been disturbed by ice flow at this location. Due to the flow pattern of ice sheets, layers forming a vertical sequence in the interior regions of an ice sheet can, under favorable conditions, be traced on horizontal profiles at the margins. Some meaningful correlations have already been established between Greenland deep ice core climatic records and corresponding records from ice margins. In these regions, a clear contrast is observed between ice of Holocene origin and significantly darker-looking ice dating from the Wisconsin glacial period, which displays summertime ablation rates 2-4x higher than the Holocene ice. This difference is due to higher concentrations of dust and other impurities in the Wisconsin ice, by 1-2 orders of magnitude, leading to reduced albedo. Furthermore, smaller crystal sizes in the Wisconsin ice lead to a more homogeneous distribution of impurities on the surface, which probably contributes to lowering the albedo. Comprehensive studies of ice crystal size and c-axis orientations on the GRIP and NGRIP deep cores provide detailed information on recrystallization processes in polar ice sheets. Based on the GRIP results, the Central-Greenland ice sheet can be vertically divided into three different recrystallization regimes: (1) normal grain growth regime (0-700 in), in which the average crystal size increases steadily to 4mm diameter; (2) polygonization regime (700-2800m), in which crystals are subdivided due to increasing strain and no further increase in crystal size is observed; and (3) migration recrystallization regime (2800-3050m), where higher temperatures (-10C) cause rapid crystal growth with average diameters increasing to 30 mm in the bottom layers. Higher impurity content in ice dating from glacial periods is seen to exert a strong inhibitive effect on crystal growth. The data on c-axis fabrics demonstrate the development of crystalline anisotropy with depth, leading to significant variation in flow properties. In particular, strong rheological contrasts are observed between glacial and interglacial ice, with fine-grained ice dating from glacial periods deforming more rapidly under conditions of simple shear than more coarse-grained interglacial ice. When the dynamics of ice masses are addressed by modeling, special attention must be given to the transition zone between ice resting on bedrock and floating ice shelves. One application for numerical ice-dynamics models that deal with such transition zones is the investigation of areas with special mass balance characteristics, like ice streams entering ice shelves or ice sheet areas over subglacial lakes. Recent results from a model applied to the ice above Lake Vostok in East Antarctica indicate that comparatively strong basal melting and adjacent refreezing occur close to the western shore of the lake.

Robust estimation of cerebral hemodynamics in neonates using multilayered diffusion model for normal and oblique incidences

NASA Astrophysics Data System (ADS)

Steinberg, Idan; Harbater, Osnat; Gannot, Israel

2014-07-01

The diffusion approximation is useful for many optical diagnostics modalities, such as near-infrared spectroscopy. However, the simple normal incidence, semi-infinite layer model may prove lacking in estimation of deep-tissue optical properties such as required for monitoring cerebral hemodynamics, especially in neonates. To answer this need, we present an analytical multilayered, oblique incidence diffusion model. Initially, the model equations are derived in vector-matrix form to facilitate fast and simple computation. Then, the spatiotemporal reflectance predicted by the model for a complex neonate head is compared with time-resolved Monte Carlo (TRMC) simulations under a wide range of physiologically feasible parameters. The high accuracy of the multilayer model is demonstrated in that the deviation from TRMC simulations is only a few percent even under the toughest conditions. We then turn to solve the inverse problem and estimate the oxygen saturation of deep brain tissues based on the temporal and spatial behaviors of the reflectance. Results indicate that temporal features of the reflectance are more sensitive to deep-layer optical parameters. The accuracy of estimation is shown to be more accurate and robust than the commonly used single-layer diffusion model. Finally, the limitations of such approaches are discussed thoroughly.

Band alignment of atomic layer deposited MgO/Zn0.8Al0.2O heterointerface determined by charge corrected X-ray photoelectron spectroscopy

NASA Astrophysics Data System (ADS)

Yan, Baojun; Liu, Shulin; Yang, Yuzhen; Heng, Yuekun

2016-05-01

Pure magnesium (MgO) and zinc oxide doped with aluminum oxide (Zn0.8Al0.2O) were prepared via atomic layer deposition. We have studied the structure and band gap of bulk Zn0.8Al0.2O material by X-ray diffractometer (XRD) and Tauc method, and the band offsets and alignment of atomic layer deposited MgO/Zn0.8Al0.2O heterointerface were investigated systematically using X-ray photoelectron spectroscopy (XPS) in this study. Different methodologies, such as neutralizing electron gun, the use of C 1s peak recalibration and zero charging method, were applied to recover the actual position of the core levels in insulator materials which were easily influenced by differential charging phenomena. Schematic band alignment diagram, valence band offset (ΔEV) and conduction band offset (ΔEC) for the interface of the MgO/Zn0.8Al0.2O heterostructure have been constructed. An accurate value of ΔEV = 0.72 ± 0.11 eV was obtained from various combinations of core levels of heterojunction with varied MgO thickness. Given the experimental band gaps of 7.83 eV for MgO and 5.29 eV for Zn0.8Al0.2O, a type-II heterojunction with a ΔEC of 3.26 ± 0.11 eV was found. Band offsets and alignment studies of these heterojunctions are important for gaining deep consideration to the design of various optoelectronic devices based on such heterointerface.

A Minimal Three-Dimensional Tropical Cyclone Model.

NASA Astrophysics Data System (ADS)

Zhu, Hongyan; Smith, Roger K.; Ulrich, Wolfgang

2001-07-01

A minimal 3D numerical model designed for basic studies of tropical cyclone behavior is described. The model is formulated in coordinates on an f or plane and has three vertical levels, one characterizing a shallow boundary layer and the other two representing the upper and lower troposphere, respectively. It has three options for treating cumulus convection on the subgrid scale and a simple scheme for the explicit release of latent heat on the grid scale. The subgrid-scale schemes are based on the mass-flux models suggested by Arakawa and Ooyama in the late 1960s, but modified to include the effects of precipitation-cooled downdrafts. They differ from one another in the closure that determines the cloud-base mass flux. One closure is based on the assumption of boundary layer quasi-equilibrium proposed by Raymond and Emanuel.It is shown that a realistic hurricane-like vortex develops from a moderate strength initial vortex, even when the initial environment is slightly stable to deep convection. This is true for all three cumulus schemes as well as in the case where only the explicit release of latent heat is included. In all cases there is a period of gestation during which the boundary layer moisture in the inner core region increases on account of surface moisture fluxes, followed by a period of rapid deepening. Precipitation from the convection scheme dominates the explicit precipitation in the early stages of development, but this situation is reversed as the vortex matures. These findings are similar to those of Baik et al., who used the Betts-Miller parameterization scheme in an axisymmetric model with 11 levels in the vertical. The most striking difference between the model results using different convection schemes is the length of the gestation period, whereas the maximum intensity attained is similar for the three schemes. The calculations suggest the hypothesis that the period of rapid development in tropical cyclones is accompanied by a change in the character of deep convection in the inner core region from buoyantly driven, predominantly upright convection to slantwise forced moist ascent.

Field testing of stiffened deep cement mixing piles under lateral cyclic loading

NASA Astrophysics Data System (ADS)

Raongjant, Werasak; Jing, Meng

2013-06-01

Construction of seaside and underground wall bracing often uses stiffened deep cement mixed columns (SDCM). This research investigates methods used to improve the level of bearing capacity of these SDCM when subjected to cyclic lateral loading via various types of stiffer cores. Eight piles, two deep cement mixed piles and six stiffened deep cement mixing piles with three different types of cores, H shape cross section prestressed concrete, steel pipe, and H-beam steel, were embedded though soft clay into medium-hard clay on site in Thailand. Cyclic horizontal loading was gradually applied until pile failure and the hysteresis loops of lateral load vs. lateral deformation were recorded. The lateral carrying capacities of the SDCM piles with an H-beam steel core increased by 3-4 times that of the DCM piles. This field research clearly shows that using H-beam steel as a stiffer core for SDCM piles is the best method to improve its lateral carrying capacity, ductility and energy dissipation capacity.

Lahars in and around the Taipei basin: Implications for the activity of the Shanchiao fault

NASA Astrophysics Data System (ADS)

Song, Sheng-Rong; Chen, Tsu-Mo; Tsao, Shuhjong; Chen, Huei-Fen; Liu, Huan-Chi

2007-11-01

In the last decade, more than 21 deep geological cores have been drilled in the Taipei basin to obtain a firmer grasp of its basic geology and engineering properties prior to the construction of new infrastructure. Thirteen of those cores contain lahar deposits, with the number of layers varying from one to three and the thickness of each layer varying from several to over 100 m. Based on their occurrence, petrology and geochemistry, it has been determined that the deposits originated from the southern slope of the Tatun Volcano Group (TVG). K-Ar age dating has shown that the lower layer of lahars was deposited less than 0.4 Ma, and this is clearly correlated to outcrops in the Kauntu, Chengtzeliao and Shihtzutao areas. These findings may well suggest that the Taipei basin has been formed in last 0.4 Ma and that the Shanchiao normal fault commenced its activity within this period. The surface trace and the activity of the Shanchiao normal fault have also been inferred and subsequently defined from stratigraphic data derived from these cores.

Effects of aluminum on epitaxial graphene grown on C-face SiC

DOE Office of Scientific and Technical Information (OSTI.GOV)

Xia, Chao, E-mail: chaxi@ifm.liu.se; Johansson, Leif I.; Hultman, Lars

The effects of Al layers deposited on graphene grown on C-face SiC substrates are investigated before and after subsequent annealing using low energy electron diffraction (LEED), photoelectron spectroscopy, and angle resolved photoemission. As-deposited layers appear inert. Annealing at a temperature of about 400 °C initiates migration of Al through the graphene into the graphene/SiC interface. Further annealing at temperatures from 500 °C to 700 °C induces formation of an ordered compound, producing a two domain √7× √7R19° LEED pattern and significant changes in the core level spectra that suggest formation of an Al-Si-C compound. Decomposition of this compound starts after annealing at 800 °C, andmore » at 1000 °C, Al is no longer possible to detect at the surface. On Si-face graphene, deposited Al layers did not form such an Al-Si-C compound, and Al was still detectable after annealing above 1000 °C.« less

Devon island ice cap: core stratigraphy and paleoclimate.

PubMed

Koerner, R M

1977-04-01

Valuable paleoclimatic information can be gained by studying the distribution of melt layers in deep ice cores. A profile representing the percentage of ice in melt layers in a core drilled from the Devon Island ice cap plotted against both time and depth shows that the ice cap has experienced a period of very warm summers since 1925, following a period of colder summers between about 1600 and 1925. The earlier period was coldest between 1680 and 1730. There is a high correlation between the melt-layer ice percentage and the mass balance of the ice cap. The relation between them suggests that the ice cap mass balance was zero (accumulation equaled ablation) during the colder period but is negative in the present warmer one. There is no firm evidence of a present cooling trend in the summer conditions on the ice cap. A comparison with the melt-layer ice percentage in cores from the other major Canadian Arctic ice caps shows that the variation of summer conditions found for the Devon Island ice cap is representative for all the large ice caps for about 90 percent of the time. There is also a good correlation between melt-layer percentage and summer sea-ice conditions in the archipelago. This suggests that the search for the northwest passage was influenced by changing climate, with the 19th-century peak of the often tragic exploration coinciding with a period of very cold summers.

A 62 ka record from the WAIS Divide ice core with annual resolution to 30 ka (so far)

NASA Astrophysics Data System (ADS)

Fudge, T. J.; Taylor, K.; McGwire, K.; Brook, E.; Sowers, T.; Steig, E.; White, J.; Vaughn, B.; Bay, R.; McConnell, J.; Waddington, E.; Conway, H.; Clow, G.; Cuffey, K.; Cole-Dai, J.; Ferris, D.; Severinghaus, J.

2012-04-01

Drilling of the West Antarctic Ice Sheet (WAIS) Divide ice core has been completed to a depth of 3400 m, about 60 meters above the bed. We present an annually resolved time scale for the most recent 30ka (to 2800 m) based on electrical conductivity measurements, called "timescale WDC06A-5". Below 2800 m the ice is dated by matching isotopes, methane, and/or dust records to other ice cores. Optical borehole logging provides stratigraphic ties to other cores for the bottom-most 75 m that was drilled in December 2011, and indicates the bottom-most ice has an age of 62 ka. The relatively young ice at depth is likely the result of basal melting. The inferred annual layer thickness of the deep ice is >1 cm, suggesting that annual layer counting throughout the entire core may be possible with continuous flow analysis of the ice core chemistry; however, the annual signal in the electrical measurements fades at about 30 ka. We compare the WDC06A-5 timescale through the glacial-interglacial transition with the Greenland GICC05 and GISP2 timescales via rapid variations in methane. We calculate a preliminary delta-age with: 1) accumulation rate inferred from the annual layer thicknesses and thinning functions computed with a 1-D ice flow model, and 2) surface temperature inferred from the low resolution d18O record and a preliminary borehole temperature profile. The WDC06A-5 timescale agrees with the GICC05 and GISP2 timescales to within decades at the 8.2k event and the ACR termination (Younger Dryas/Preboreal transition, 11.7 ka). This is within the delta-age and correlation uncertainties. At the rapid methane drop at ~12.8 ka, the WDC06A-5 timescale is ~150 years older than GICC05 and ~90 older than GISP2; while at ~14.8 ka, the timescales once again agree within the delta-age and correlation uncertainties. The cause of the age discrepancy at 12.8 ka is unclear. We also compare the WDC06A-5 timescale at Dansgaard-Oeschger events 3 and 4 (~27.5 and 29 ka) to the radiometrically-dated speolethem records from Hulu Cave, China (Larry Edwards and Hai Cheng, personal communication). To make such a comparison, we assume that the rapid variations in methane from the WAIS Divide core are synchronous with the rapid variations in d18O in the speleothem record. We find that the WDC06A-5 timescale is multiple hundreds of years older than the Hulu Cave record. As the GICC05 timescale is younger than the Hulu timescale, this puts the WDC06A-5 timescale even older than the GICC05. The uncertainties in the comparison are large both because of the uncertainty in the synchroneity of the ice core methane and speleothem isotope variations and because of the larger delta-age for the ice core in the glacial period. The timescale for the WAIS Divide core will be revised when the CFA results become available.

Deep learning

NASA Astrophysics Data System (ADS)

Lecun, Yann; Bengio, Yoshua; Hinton, Geoffrey

2015-05-01

Deep learning allows computational models that are composed of multiple processing layers to learn representations of data with multiple levels of abstraction. These methods have dramatically improved the state-of-the-art in speech recognition, visual object recognition, object detection and many other domains such as drug discovery and genomics. Deep learning discovers intricate structure in large data sets by using the backpropagation algorithm to indicate how a machine should change its internal parameters that are used to compute the representation in each layer from the representation in the previous layer. Deep convolutional nets have brought about breakthroughs in processing images, video, speech and audio, whereas recurrent nets have shone light on sequential data such as text and speech.

Deep learning.

PubMed

LeCun, Yann; Bengio, Yoshua; Hinton, Geoffrey

2015-05-28

Deep learning allows computational models that are composed of multiple processing layers to learn representations of data with multiple levels of abstraction. These methods have dramatically improved the state-of-the-art in speech recognition, visual object recognition, object detection and many other domains such as drug discovery and genomics. Deep learning discovers intricate structure in large data sets by using the backpropagation algorithm to indicate how a machine should change its internal parameters that are used to compute the representation in each layer from the representation in the previous layer. Deep convolutional nets have brought about breakthroughs in processing images, video, speech and audio, whereas recurrent nets have shone light on sequential data such as text and speech.

Water-rich planets: How habitable is a water layer deeper than on Earth?

NASA Astrophysics Data System (ADS)

Noack, L.; Höning, D.; Rivoldini, A.; Heistracher, C.; Zimov, N.; Journaux, B.; Lammer, H.; Van Hoolst, T.; Bredehöft, J. H.

2016-10-01

Water is necessary for the origin and survival of life as we know it. In the search for life-friendly worlds, water-rich planets therefore are obvious candidates and have attracted increasing attention in recent years. The surface H2O layer on such planets (containing a liquid water ocean and possibly high-pressure ice below a specific depth) could potentially be hundreds of kilometres deep depending on the water content and the evolution of the proto-atmosphere. We study possible constraints for the habitability of deep water layers and introduce a new habitability classification relevant for water-rich planets (from Mars-size to super-Earth-size planets). A new ocean model has been developed that is coupled to a thermal evolution model of the mantle and core. Our interior structure model takes into account depth-dependent thermodynamic properties and the possible formation of high-pressure ice. We find that heat flowing out of the silicate mantle can melt an ice layer from below (in some cases episodically), depending mainly on the thickness of the ocean-ice shell, the mass of the planet, the surface temperature and the interior parameters (e.g. radioactive mantle heat sources). The high pressure at the bottom of deep water-ice layers could also impede volcanism at the water-mantle boundary for both stagnant lid and plate tectonics silicate shells. We conclude that water-rich planets with a deep ocean, a large planet mass, a high average density or a low surface temperature are likely less habitable than planets with an Earth-like ocean.

How was the deep scattering layers (DSLs) influenced by the Deepwater Horizon Spill? - Evidences from 10-year NTL oil/gas ADCP backscattering data collected at the spill site

NASA Astrophysics Data System (ADS)

Wang, Z.; DiMarco, S. F.; Socolofsky, S. A.

2016-02-01

There are suspicions that the 2010 DWH oil spill might have affected the biomass in the deep scattering layers (DSLs), at least during the period in which the spill was active and oil dispersants were used. The acoustic backscattering intensity (ABI) data from acoustic Doppler current profilers (ADCPs) have been shown to detect and monitor the spatial and temporal evolution of DSLs in many oceans. Since 2005 with the issue of a Notice of Lessees and Operators (NTL), namely, NTL No. 2005-G5, large amounts of continuous ADCP data have been collected by oil/gas companies in the Northern Gulf at more than 100 stations and made publically available via the National Data Buoyancy Center (NDBC) website. NTL ADCPs data have also been collected prior to, during and after the DWH spill at the spill site. The ADCP with station # 42872 was mounted on the DWH rig and collected ABI data from 2005 until the rig sank in April 2010. ADCPs with station # 42916 and 42868 were then moved into the spill region and collected ABI data during and after the spill. The deep scattering layers were well resolved by those 38 kHz with vertical range of 1000m. The SSL provides key food for many large sea-animals, including whales, dolphins, billfishes and giant tunas and therefore have important roles in the ecosystem of the deep Gulf. By carefully applying calibrations and corrections, the ABI data can be converted to biologically meaningful mean volume backscattering strength (MVBS) and areal backscattering strength (ABS). This is an effective and powerful way to study the pelagic communality dynamics in the deep scattering layers and to investigate greater details that were previously inaccessible. Utilizing the NTL data collected during the past 10 years around the DWH site, we investigate the spill influence on deep scattering layers by comparing the biomass pre- and post BP spill and comparing biomass variations in areas with and without oil contamination. Preliminary results have shown that there is a clear decrease trend of relative biomass in the deep scattering layer in 2010 after the spill. We also find extremely dense scattering patches at the depth of DSLs, which appear only during the spill and are likely formed by spill materials. Statistical analysis on the layer depth, intensity, and thickness and their variations over time are also investigated.

Simulation of Shallow Cumuli and Their Transition to Deep Convective Clouds by Cloud-resolving Models with Different Third-order Turbulence Closures

NASA Technical Reports Server (NTRS)

Cheng, Anning; Xu, Kuan-Man

2006-01-01

The abilities of cloud-resolving models (CRMs) with the double-Gaussian based and the single-Gaussian based third-order closures (TOCs) to simulate the shallow cumuli and their transition to deep convective clouds are compared in this study. The single-Gaussian based TOC is fully prognostic (FP), while the double-Gaussian based TOC is partially prognostic (PP). The latter only predicts three important third-order moments while the former predicts all the thirdorder moments. A shallow cumulus case is simulated by single-column versions of the FP and PP TOC models. The PP TOC improves the simulation of shallow cumulus greatly over the FP TOC by producing more realistic cloud structures. Large differences between the FP and PP TOC simulations appear in the cloud layer of the second- and third-order moments, which are related mainly to the underestimate of the cloud height in the FP TOC simulation. Sensitivity experiments and analysis of probability density functions (PDFs) used in the TOCs show that both the turbulence-scale condensation and higher-order moments are important to realistic simulations of the boundary-layer shallow cumuli. A shallow to deep convective cloud transition case is also simulated by the 2-D versions of the FP and PP TOC models. Both CRMs can capture the transition from the shallow cumuli to deep convective clouds. The PP simulations produce more and deeper shallow cumuli than the FP simulations, but the FP simulations produce larger and wider convective clouds than the PP simulations. The temporal evolutions of cloud and precipitation are closely related to the turbulent transport, the cold pool and the cloud-scale circulation. The large amount of turbulent mixing associated with the shallow cumuli slows down the increase of the convective available potential energy and inhibits the early transition to deep convective clouds in the PP simulation. When the deep convective clouds fully develop and the precipitation is produced, the cold pools produced by the evaporation of the precipitation are not favorable to the formation of shallow cumuli.

Electrical Current Leakage and Open-Core Threading Dislocations in AlGaN-Based Deep Ultraviolet Light-Emitting Diodes.

DOE PAGES

Moseley, Michael William; Allerman, Andrew A.; Crawford, Mary H.; ...

2014-08-04

Electrical current transport through leakage paths in AlGaN-based deep ultraviolet (DUV) lightemitting diodes (LEDs) and their effect on LED performance are investigated. Open-core threading dislocations, or nanopipes, are found to conduct current through nominally insulating Al0.7Ga0.3N layers and limit the performance of DUV-LEDs. A defect-sensitive phosphoric acid etch reveals these opencore threading dislocations in the form of large, micron-scale hexagonal etch pits visible with optical microscopy, while closed-core screw-, edge-, and mixed-type threading dislocations are represented by smaller and more numerous nanometer-scale pits visible by atomic-force microscopy. The electrical and optical performances of DUV-LEDs fabricated on similar Si-doped Al0.7Ga0.3N templatesmore » are found to have a strong correlation to the density of these nanopipes, despite their small fraction (<0.1% in this study) of the total density of threading dislocations.« less

Deep level defects in dilute GaAsBi alloys grown under intense UV illumination

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mooney, P. M.; Tarun, Marianne; Beaton, D. A.

2016-07-21

Dilute GaAs1-xBix alloys exhibiting narrow band edge photoluminescence (PL) were recently grown by molecular beam epitaxy (MBE) with the growth surface illuminated by intense UV radiation. To investigate whether the improved optical quality of these films results from a reduction in the concentration of deep level defects, p+/n and n+/p junction diodes were fabricated on both the illuminated and dark areas of several samples. Deep Level Transient Spectroscopy (DLTS) measurements show that the illuminated and dark areas of both the n- and p-type GaAs1-xBix epi-layers have similar concentrations of near mid-gap electron and hole traps, in the 1015 cm-3 range.more » Thus the improved PL spectra cannot be explained by a reduction in non-radiative recombination at deep level defects. We note that carrier freeze-out above 35 K is significantly reduced in the illuminated areas of the p-type GaAs1-xBix layers compared to the dark areas, allowing the first DLTS measurements of defect energy levels close to the valence band edge. These defect levels may account for differences in the PL spectra from the illuminated and dark areas of un-doped layers with a similar Bi fraction.« less

Atomic layer deposition frequency-multiplied Fresnel zone plates for hard x-rays focusing

DOE PAGES

Moldovan, Nicolaie; Divan, Ralu; Zeng, Hongjun; ...

2017-12-01

The design and fabrication of Fresnel zone plates for hard x-ray focusing up to 25 keV photon energies with better than 50 nm imaging half-pitch resolution is reported as performed by forming an ultrananocrystalline diamond (UNCD) scaffold, subsequently coating it with atomic layer deposition (ALD) with an absorber/phase shifting material, followed by back side etching of Si to form a diamond membrane device. The scaffold is formed by chemical vapor-deposited UNCD, electron beam lithography, and deep-reactive ion etching of diamond to desired specifications. The benefits of using diamond are as follows: improved mechanical robustness to prevent collapse of high-aspect-ratio ringmore » structures, a known high-aspect-ratio etch method, excellent radiation hardness, extremely low x-ray absorption, and significantly improved thermal/dimensional stability as compared to alternative materials. Central to the technology is the high-resolution patterning of diamond membranes at wafer scale, which was pushed to 60 nm lines and spaces etched 2.2-mu m-deep, to an aspect ratio of 36:1. The absorber growth was achieved by ALD of Ir, Pt, or W, while wafer-level processing allowed to obtain up to 121 device chips per 4 in. wafer with yields better than 60%. X-ray tests with such zone plates allowed resolving 50 nm lines and spaces, at the limit of the available resolution test structures.« less

Photoinduced current transient spectroscopy of deep levels and transport mechanisms in iron-doped GaN thin films grown by low pressure-metalorganic vapor phase epitaxy

NASA Astrophysics Data System (ADS)

Muret, P.; Pernot, J.; Azize, M.; Bougrioua, Z.

2007-09-01

Electrical transport and deep levels are investigated in GaN:Fe layers epitaxially grown on sapphire by low pressure metalorganic vapor phase epitaxy. Photoinduced current transient spectroscopy and current detected deep level spectroscopy are performed between 200 and 650 K on three Fe-doped samples and an undoped sample. A detailed study of the detected deep levels assigns dominant centers to a deep donor 1.39 eV below the conduction band edge EC and to a deep acceptor 0.75 eV above the valence band edge EV at low electric field. A strong Poole-Frenkel effect is evidenced for the donor. Schottky diodes characteristics and transport properties in the bulk GaN:Fe layer containing a homogenous concentration of 1019 Fe/cm3 are typical of a compensated semiconductor. They both indicate that the bulk Fermi level is located typically 1.4 eV below EC, in agreement with the neutrality equation and dominance of the deep donor concentration. This set of results demonstrates unambiguously that electrical transport in GaN:Fe is governed by both types, either donor or acceptor, of the iron impurity, either substitutional in gallium sites or associated with other defects.

Reduced Serotonin Receptor Subtypes in a Limbic and a Neocortical Region in Autism

PubMed Central

Oblak, Adrian; Gibbs, Terrell T.; Blatt, Gene J.

2013-01-01

Autism is a behaviorally defined, neurological disorder with symptom onset before the age of three. Abnormalities in social-emotional behaviors are a core deficit in autism and are characterized by impaired reciprocal social interaction, lack of facial expressions, and the inability to recognize familiar faces. The posterior cingulate cortex (PCC) and fusiform gyrus (FG) are two regions within an extensive limbic-cortical network that contribute to social-emotional behaviors. Evidence indicates that changes in brains of individuals with autism begin prenatally. Serotonin (5HT) is one of the earliest expressed neurotransmitters, and plays an important role in synaptogenesis, neurite outgrowth, and neuronal migration. Abnormalities in 5HT systems have been implicated in several psychiatric disorders including autism, as evidenced by immunology, imaging, genetics, pharmacotherapy, and neuropathology. Although information is known regarding peripheral 5HT in autism, there is emerging evidence that 5HT systems in the CNS, including various 5HT receptor subtypes and transporters, are affected in autism. The present study demonstrated significant reductions in 5HT1A receptor binding density in superficial and deep layers of the PCC and FG, and in the density of 5HT2A receptors in superficial layers of the PCC and FG. Significant reduction in the density of serotonin transporters (5-HTT) was also found in the deep layers of the FG, but normal levels were demonstrated in both layers of the PCC and superficial layers of the FG. These studies provide potential substrates for decreased 5-HT modulation/innervation in the autism brain, and implicate two 5-HT receptor subtypes as potential neuromarkers for novel or existing pharmacotherapies. PMID:23894004

Reduced serotonin receptor subtypes in a limbic and a neocortical region in autism.

PubMed

Oblak, Adrian; Gibbs, Terrell T; Blatt, Gene J

2013-12-01

Autism is a behaviorally defined, neurological disorder with symptom onset before the age of 3. Abnormalities in social-emotional behaviors are a core deficit in autism, and are characterized by impaired reciprocal-social interaction, lack of facial expressions, and the inability to recognize familiar faces. The posterior cingulate cortex (PCC) and fusiform gyrus (FG) are two regions within an extensive limbic-cortical network that contribute to social-emotional behaviors. Evidence indicates that changes in brains of individuals with autism begin prenatally. Serotonin (5-HT) is one of the earliest expressed neurotransmitters, and plays an important role in synaptogenesis, neurite outgrowth, and neuronal migration. Abnormalities in 5-HT systems have been implicated in several psychiatric disorders, including autism, as evidenced by immunology, imaging, genetics, pharmacotherapy, and neuropathology. Although information is known regarding peripheral 5-HT in autism, there is emerging evidence that 5-HT systems in the central nervous system, including various 5-HT receptor subtypes and transporters, are affected in autism. The present study demonstrated significant reductions in 5-HT1A receptor-binding density in superficial and deep layers of the PCC and FG, and in the density of 5-HT(2A) receptors in superficial layers of the PCC and FG. A significant reduction in the density of serotonin transporters (5-HTT) was also found in the deep layers of the FG, but normal levels were demonstrated in both layers of the PCC and superficial layers of the FG. This study provides potential substrates for decreased 5-HT modulation/innervation in the autism brain, and implicate two 5-HT receptor subtypes as potential neuromarkers for novel or existing pharmacotherapies. © 2013 International Society for Autism Research, Wiley Periodicals, Inc.

Responses to the 2800 years BP climatic oscillation in shallow- and deep-basin sediments from the Dead Sea

NASA Astrophysics Data System (ADS)

Neugebauer, Ina; Brauer, Achim; Schwab, Markus; Dulski, Peter; Frank, Ute; Hadzhiivanova, Elitsa; Kitagawa, Hiroyuki; Litt, Thomas; Schiebel, Vera; Taha, Nimer; Waldmann, Nicolas

2015-04-01

Laminated lake sediments from the Dead Sea basin provide high-resolution records of climatic variability in the eastern Mediterranean region, which is considered being especially sensitive to changing climatic conditions. In the study presented here, we aim to reconstruct palaeoclimatic changes and their relation to the frequency of flood/erosion and dust deposition events as archived in the Dead Sea basin for the time interval from ca 3700 to 1700 years BP. A ca 4 m thick, mostly annually laminated (varved) sediment section from the western margin of the Dead Sea (shallow-water DSEn - Ein Gedi profile) was analysed and correlated to the new ICDP Dead Sea Deep Drilling Project core 5017-1 from the deep basin. To detect even single event layers, we applied a multi-proxy approach of high-resolution microscopic thin section analyses, µXRF element scanning and magnetic susceptibility measurements, supported by grain size and palynological analyses. Based on radiocarbon and varve dating two pronounced dry periods were detected at ~3500-3300 yrs BP and ~2900-2400 yrs BP that are characterized by a sand deposit during the older dry period and enhanced frequency of coarse detrital layers during the younger dry period in the shallow-water DSEn core, both interpreted as increased erosion processes. In the 5017-1 deep-basin core these dry periods are depicted by halite deposits. The timing of the younger dry period broadly coincides with the Homeric Minimum of solar activity at ca 2800 yrs BP. Our results suggest that during this period the Dead Sea region experienced a change in synoptic weather patterns leading to an increased occurrence of flash-flood events, overprinting the overall dry climatic conditions. Following this dry spell, a 250-yrs period of increased dust deposition is observed, coinciding with more regular aragonite precipitation during less arid climatic conditions.

On the Land-Ocean Contrast of Tropical Convection and Microphysics Statistics Derived from TRMM Satellite Signals and Global Storm-Resolving Models

NASA Technical Reports Server (NTRS)

Matsui, Toshihisa; Chern, Jiun-Dar; Tao, Wei-Kuo; Lang, Stephen E.; Satoh, Masaki; Hashino, Tempei; Kubota, Takuji

2016-01-01

A 14-year climatology of Tropical Rainfall Measuring Mission (TRMM) collocated multi-sensor signal statistics reveal a distinct land-ocean contrast as well as geographical variability of precipitation type, intensity, and microphysics. Microphysics information inferred from the TRMM precipitation radar and Microwave Imager (TMI) show a large land-ocean contrast for the deep category, suggesting continental convective vigor. Over land, TRMM shows higher echo-top heights and larger maximum echoes, suggesting taller storms and more intense precipitation, as well as larger microwave scattering, suggesting the presence of morelarger frozen convective hydrometeors. This strong land-ocean contrast in deep convection is invariant over seasonal and multi-year time-scales. Consequently, relatively short-term simulations from two global storm-resolving models can be evaluated in terms of their land-ocean statistics using the TRMM Triple-sensor Three-step Evaluation via a satellite simulator. The models evaluated are the NASA Multi-scale Modeling Framework (MMF) and the Non-hydrostatic Icosahedral Cloud Atmospheric Model (NICAM). While both simulations can represent convective land-ocean contrasts in warm precipitation to some extent, near-surface conditions over land are relatively moisture in NICAM than MMF, which appears to be the key driver in the divergent warm precipitation results between the two models. Both the MMF and NICAM produced similar frequencies of large CAPE between land and ocean. The dry MMF boundary layer enhanced microwave scattering signals over land, but only NICAM had an enhanced deep convection frequency over land. Neither model could reproduce a realistic land-ocean contrast in in deep convective precipitation microphysics. A realistic contrast between land and ocean remains an issue in global storm-resolving modeling.

Deep in vivo two-photon microscopy with a low cost custom built mode-locked 1060 nm fiber laser

PubMed Central

Perillo, Evan P.; McCracken, Justin E.; Fernée, Daniel C.; Goldak, John R.; Medina, Flor A.; Miller, David R.; Yeh, Hsin-Chih; Dunn, Andrew K.

2016-01-01

Here we demonstrate that a mode-locked ytterbium fiber laser for two-photon fluorescence microscopy can be built for $13,000. The laser emits at a wavelength of 1060 nm with a usable average power of 1 W at a repetition rate of 40 MHz and a compressed pulse width of 81 fs at the sample. The laser is used to obtain deep in vivo two-color images of layer-V pyramidal neurons expressing YFP and vasculature labelled with Texas Red at depths up to 900 µm. The sub-1 µm features of dendritic spines can be resolved at a 200 µm depth. PMID:26977343

Learning better deep features for the prediction of occult invasive disease in ductal carcinoma in situ through transfer learning

NASA Astrophysics Data System (ADS)

Shi, Bibo; Hou, Rui; Mazurowski, Maciej A.; Grimm, Lars J.; Ren, Yinhao; Marks, Jeffrey R.; King, Lorraine M.; Maley, Carlo C.; Hwang, E. Shelley; Lo, Joseph Y.

2018-02-01

Purpose: To determine whether domain transfer learning can improve the performance of deep features extracted from digital mammograms using a pre-trained deep convolutional neural network (CNN) in the prediction of occult invasive disease for patients with ductal carcinoma in situ (DCIS) on core needle biopsy. Method: In this study, we collected digital mammography magnification views for 140 patients with DCIS at biopsy, 35 of which were subsequently upstaged to invasive cancer. We utilized a deep CNN model that was pre-trained on two natural image data sets (ImageNet and DTD) and one mammographic data set (INbreast) as the feature extractor, hypothesizing that these data sets are increasingly more similar to our target task and will lead to better representations of deep features to describe DCIS lesions. Through a statistical pooling strategy, three sets of deep features were extracted using the CNNs at different levels of convolutional layers from the lesion areas. A logistic regression classifier was then trained to predict which tumors contain occult invasive disease. The generalization performance was assessed and compared using repeated random sub-sampling validation and receiver operating characteristic (ROC) curve analysis. Result: The best performance of deep features was from CNN model pre-trained on INbreast, and the proposed classifier using this set of deep features was able to achieve a median classification performance of ROC-AUC equal to 0.75, which is significantly better (p<=0.05) than the performance of deep features extracted using ImageNet data set (ROCAUC = 0.68). Conclusion: Transfer learning is helpful for learning a better representation of deep features, and improves the prediction of occult invasive disease in DCIS.

Can frequent precipitation moderate drought impact on peatmoss carbon uptake in northern peatlands?

NASA Astrophysics Data System (ADS)

Nijp, Jelmer; Limpens, Juul; Metselaar, Klaas; van der Zee, Sjoerd; Berendse, Frank; Robroek, Bjorn

2014-05-01

Northern peatlands represent one of the largest global carbon stores that can potentially be released by water table drawdown during extreme summer droughts. Small precipitation events may moderate negative impacts of deep water levels on carbon uptake by sustaining photosynthesis of peatmoss (Sphagnum spp.), the key species in these ecosystems. We experimentally assessed the importance of the temporal distribution of precipitation for Sphagnum water supply and carbon uptake during a stepwise decrease in water levels in a growth chamber. CO2 exchange and the water balance were measured for intact cores of three peatmoss species representative of three contrasting habitats in northern peatlands (Sphagnum fuscum, S. balticum and S. majus). For shallow water levels, capillary rise was the most important source of water for peatmoss photosynthesis and precipitation did not promote carbon uptake irrespective of peatmoss species. For deep water levels, however, precipitation dominated over capillary rise and moderated adverse effects of drought on carbon uptake by peat mosses. The ability to use the transient water supply by precipitation was species-specific: carbon uptake of S. fuscum increased linearly with precipitation frequency for deep water levels, whereas S. balticum and S. majus showed depressed carbon uptake at intermediate precipitation frequencies. Our results highlight the importance of precipitation for carbon uptake by peatmosses. The potential of precipitation to moderate drought impact, however, is species specific and depends on the temporal distribution of precipitation and water level. These results also suggest that modelling approaches in which water level depth is used as the only state variable determining water availability in the living moss layer and (in)directly linked to Sphagnum carbon uptake may have serious drawbacks. The predictive power of peatland ecosystem models may be reduced when deep water levels prevail, as precipitation frequency and quantity are likely the main variables controlling carbon uptake.

A 400-Year Ice Core Melt Layer Record of Summertime Warming in the Alaska Range

NASA Astrophysics Data System (ADS)

Winski, Dominic; Osterberg, Erich; Kreutz, Karl; Wake, Cameron; Ferris, David; Campbell, Seth; Baum, Mark; Bailey, Adriana; Birkel, Sean; Introne, Douglas; Handley, Mike

2018-04-01

Warming in high-elevation regions has societally important impacts on glacier mass balance, water resources, and sensitive alpine ecosystems, yet very few high-elevation temperature records exist from the middle or high latitudes. While a variety of paleoproxy records provide critical temperature records from low elevations over recent centuries, melt layers preserved in alpine glaciers present an opportunity to develop calibrated, annually resolved temperature records from high elevations. Here we present a 400-year temperature proxy record based on the melt layer stratigraphy of two ice cores collected from Mt. Hunter in Denali National Park in the central Alaska Range. The ice core record shows a sixtyfold increase in water equivalent total annual melt between the preindustrial period (before 1850 Common Era) and present day. We calibrate the melt record to summer temperatures based on weather station data from the ice core drill site and find that the increase in melt production represents a summer warming rate of at least 1.92 ± 0.31°C per century during the last 100 years, exceeding rates of temperature increase at most low-elevation sites in Alaska. The Mt. Hunter melt layer record is significantly (p < 0.05) correlated with surface temperatures in the central tropical Pacific through a Rossby wave-like pattern that enhances high temperatures over Alaska. Our results show that rapid alpine warming has taken place in the Alaska Range for at least a century and that conditions in the tropical oceans contribute to this warming.

Dro1, a major QTL involved in deep rooting of rice under upland field conditions.

PubMed

Uga, Yusaku; Okuno, Kazutoshi; Yano, Masahiro

2011-05-01

Developing a deep root system is an important strategy for avoiding drought stress in rice. Using the 'basket' method, the ratio of deep rooting (RDR; the proportion of total roots that elongated through the basket bottom) was calculated to evaluate deep rooting. A new major quantitative trait locus (QTL) controlling RDR was detected on chromosome 9 by using 117 recombinant inbred lines (RILs) derived from a cross between the lowland cultivar IR64, with shallow rooting, and the upland cultivar Kinandang Patong (KP), with deep rooting. This QTL explained 66.6% of the total phenotypic variance in RDR in the RILs. A BC(2)F(3) line homozygous for the KP allele of the QTL had an RDR of 40.4%, compared with 2.6% for the homozygous IR64 allele. Fine mapping of this QTL was undertaken using eight BC(2)F(3) recombinant lines. The RDR QTL Dro1 (Deeper rooting 1) was mapped between the markers RM24393 and RM7424, which delimit a 608.4 kb interval in the reference cultivar Nipponbare. To clarify the influence of Dro1 in an upland field, the root distribution in different soil layers was quantified by means of core sampling. A line homozygous for the KP allele of Dro1 (Dro1-KP) and IR64 did not differ in root dry weight in the shallow soil layers (0-25 cm), but root dry weight of Dro1-KP in deep soil layers (25-50 cm) was significantly greater than that of IR64, suggesting that Dro1 plays a crucial role in increased deep rooting under upland field conditions.

Deep Subseafloor Fungi as an Untapped Reservoir of Amphipathic Antimicrobial Compounds.

PubMed

Navarri, Marion; Jégou, Camille; Meslet-Cladière, Laurence; Brillet, Benjamin; Barbier, Georges; Burgaud, Gaëtan; Fleury, Yannick

2016-03-10

The evolving global threat of antimicrobial resistance requires a deep renewal of the antibiotic arsenal including the isolation and characterization of new drugs. Underexplored marine ecosystems may represent an untapped reservoir of novel bioactive molecules. Deep-sea fungi isolated from a record-depth sediment core of almost 2000 m below the seafloor were investigated for antimicrobial activities. This antimicrobial screening, using 16 microbial targets, revealed 33% of filamentous fungi synthesizing bioactive compounds with activities against pathogenic bacteria and fungi. Interestingly, occurrence of antimicrobial producing isolates was well correlated with the complexity of the habitat (in term of microbial richness), as higher antimicrobial activities were obtained at specific layers of the sediment core. It clearly highlights complex deep-sea habitats as chemical battlefields where synthesis of numerous bioactive compounds appears critical for microbial competition. The six most promising deep subseafloor fungal isolates were selected for the production and extraction of bioactive compounds. Depending on the fungal isolates, antimicrobial compounds were only biosynthesized in semi-liquid or solid-state conditions as no antimicrobial activities were ever detected using liquid fermentation. An exception was made for one fungal isolate, and the extraction procedure designed to extract amphipathic compounds was successful and highlighted the amphiphilic profile of the bioactive metabolites.

Evolution of Metallic Trace Elements in Contaminated River Sediments: Geochemical Variation Along River Linear and Vertical Profile

NASA Astrophysics Data System (ADS)

Kanbar, Hussein; Montarges-Pelletier, Emmanuelle; Mansuy-Huault, Laurence; Losson, Benoit; Manceau, Luc; Bauer, Allan; Bihannic, Isabelle; Gley, Renaud; El Samrani, Antoine; Kobaissi, Ahmad; Kazpard, Veronique; Villieras, Frédéric

2015-04-01

Metal pollution in riverine systems poses a serious threat that jeopardizes water and sediment quality, and hence river dwelling biota. Since those metallic pollutants can be transported for long distances via river flow, river management has become a great necessity, especially in times where industrial activities and global climate change are causing metal release and spreading (by flooding events). These changes are able to modify river hydrodynamics, and as a consequence natural physico-chemical status of different aquatic system compartments, which in turn alter metal mobility, availability and speciation. Vertical profiles of sediments hold the archive of what has been deposited for several tenths of years, thus they are used as a tool to study what had been deposited in rivers beds. The studied area lies in the Orne river, northeastern France. This river had been strongly modified physically and affected by steelmaking industrial activities that had boosted in the middle of the last century. This study focuses on several sites along the linear of the Orne river, as well as vertical profiles of sediments. Sediment cores were collected at sites where sedimentation is favoured, and in particular upstream two dams, built in the second half of the XXth century for industrial purposes. Sediment cores were sliced into 2-5cm layers, according to suitability, and analysed for physical and physico-chemical properties, elemental content and mineralogy. Data of the vertical profile in a sediment core is important to show the evolution of sediments as a function of depth, and hence age, in terms of nature, size and constituents. The physical properties include particle size distribution (PSD) and water content. In addition, the physico-chemical properties, such as pH and oxido-reduction potential (ORP) of interstitial water from undisturbed cores were also detected. Total elemental content of sediment and available ones of extracted interstitial waters was detected using ICP-MS and ICP-OES for trace and major elements respectively. Well crystallized minerals were detected by X-Ray Diffraction (XRD), while amorphous and poorly crystallized phases were identified with scanning and transmission electron microscope (SEM and TEM respectively), combined with Energy Dispersive X-Ray Spectroscopy (EDXS). Such microscopic techniques also provided information about metal carriers. To have an insight about the metal speciation at molecular level, X-Ray Absorption spectroscopy (XAS) was performed at Zn K-edge. The first analyses of Orne sediment cores evidenced different particle size distribution and sediment consolidation levels. Yet the cores showed that below a layer of apparently recent sediments (about 10-20 cm), lie highly contaminated ones. Zn and Pb content in deep sediment layers reach several thousands ppm, where they appeared mainly as Zn and Pb sulphides. Also, the high content of iron in deep sediments resulted in the presence of different iron phases: hematite, wuestite, magnetite, goethite, sulphides (pyrite), as well as undefined iron-silicate. In addition, interstitial waters contained high values of available metals (Zn: 500-35000 ppm, Pb: 150-5700 ppm, Cd: 1-10ppm), which might cause a greater concern than solid-bound metals, especially when river bed sediments are disturbed.

Hemodynamic monitoring in different cortical layers with a single fiber optical system

NASA Astrophysics Data System (ADS)

Yu, Linhui; Noor, M. Sohail; Kiss, Zelma H. T.; Murari, Kartikeya

2018-02-01

Functional monitoring of highly-localized deep brain structures is of great interest. However, due to light scattering, optical methods have limited depth penetration or can only measure from a large volume. In this research, we demonstrate continuous measurement of hemodynamics in different cortical layers in response to thalamic deep brain stimulation (DBS) using a single fiber optical system. A 200-μm-core-diameter multimode fiber is used to deliver and collect light from tissue. The fiber probe can be stereotaxically implanted into the brain region of interest at any depth to measure the di use reflectance spectra from a tissue volume of 0.02-0.03 mm3 near the fiber tip. Oxygenation is then extracted from the reflectance spectra using an algorithm based on Monte Carlo simulations. Measurements were performed on the surface (cortical layer I) and at 1.5 mm depth (cortical layer VI) of the motor cortex in anesthetized rats with thalamic DBS. Preliminary results revealed the oxygenation changes in response to DBS. Moreover, the baseline as well as the stimulus-evoked change in oxygenation were different at the two depths of cortex.

Dynamics of Metamorphic Core Complexes Inferred From Modeling and Metamorphic Petrology

NASA Astrophysics Data System (ADS)

Whitney, D. L.; Rey, P.; Teyssier, C.

2008-12-01

Orogenic collapse involves extension and thinning of thick, hot, and in some cases partially molten, crust, leading to the formation of metamorphic core complexes (MCC) that are commonly cored by migmatite domes. 2D numerical modeling predicts that the geometry and P-T-t history of MCC varies as a function of the presence/absence of a partially molten layer in the deep crust; the nature of heterogeneities that localize the MCC (e.g. normal fault in upper crust vs. point-like anomaly in the deep crust); and extensional strain rate. The presence of melt in particular has a significant effect on the thermal and structural history of MCC because the presence of partially molten crust or magma bodies at depth enhances upward advection of material and heat. At high extension rate (cm/year in the region of the MCC), partially molten crust crystallizes as migmatite and cools along a high geothermal gradient (35-65 C/km); material remains partially molten during ascent, forming a migmatite dome when it crystallizes at shallower crustal levels (e.g. cordierite/sillimanite stability field). At low strain rate (mm/yr in the MCC region), the partially molten crust crystallizes at high pressure (e.g. kyanite zone); this material is subsequently deformed in the solid-state along a cooler geothermal gradient (20-35 C/km) during ascent. MCC that develop during extension of partially molten crust may therefore record distinct crystallization versus exhumation histories as a function of extensional strain rate. The mineral assemblages, metamorphic reaction histories, and structures of migmatite-cored (Mc) MCC can therefore be used to interpret the dynamics of MCC formation, e.g. "fast" McMCC in the northern N American Cordillera and Aegean regions.

RETINAL DEEP CAPILLARY ISCHEMIA ASSOCIATED WITH AN OCCLUDED CONGENITAL RETINAL MACROVESSEL.

PubMed

Hasegawa, Taiji; Ogata, Nahoko

2017-01-01

To report the case of a patient with an occluded congenital retinal macrovessel accompanied by retinal deep capillary ischemia. A 38-year-old woman presented with a 2-day history of a paracentral scotoma of her right eye. Fundus photograph showed a dilated congenital retinal macrovessel with arteriovenous anastomosis, an intravascular white region indicating the thrombus at arteriovenous anastomotic region, and an area of retinal whitening temporal to the fovea. The spectral domain optical coherence tomography images through the area of retinal whitening showed a thickening and highly reflectivity at the level of the inner nuclear layer, which is likely due to the deep capillary ischemia. After 6 weeks, spectral domain optical coherence tomography images through the same area demonstrated a thinning and atrophy of only the inner nuclear layer, and the patient's paracentral scotoma persisted. Acute capillary hemodynamic changes caused deep capillary ischemia. The spectral domain optical coherence tomography showed a highly reflective lesion at the level of the inner nuclear layer in the acute phase.

Modulation of a pulsatile release drug delivery system using different swellable/rupturable materials.

PubMed

El-Maradny, Hoda A

2007-11-01

Diclofenac sodium tablets consisting of core coated with two layers of swelling and rupturable coatings were prepared and evaluated as a pulsatile drug delivery system. Cores containing the drug were prepared by direct compression using microcrystalline cellulose and Ludipress as hydrophilic excipients with the ratio of 1:1. Cores were then coated sequentially with an inner swelling layer of different swellable materials; either Explotab, Croscarmellose sodium, or Starch RX 1500, and an outer rupturable layer of different levels of ethylcellulose. The effect of the nature of the swelling layer and the level of the rupturable coating on the lag time and the water uptake were investigated. Drug release rate studies were performed using USP paddle method. Results showed the dependence of the lag time and water uptake prior to tablet rupture on the nature of the swelling layer and the coating levels. Explotab showed a significant decrease in the lag time, followed by Croscarmellose sodium and finally by Starch RX 1500. Increasing the level of ethylcellulose coating retarded the diffusion of the release medium to the swelling layer and the rupture of the coat, thus prolonging the lag time.

Application of Bayesian Inversion for Multilayer Reservoir Mapping while Drilling Measurements

NASA Astrophysics Data System (ADS)

Wang, J.; Chen, H.; Wang, X.

2017-12-01

Real-time geosteering technology plays a key role in horizontal well development, which keeps the wellbore trajectories within target zones to maximize reservoir contact. The new generation logging while drilling (LWD) resistivity tools have longer spacing and deeper investigation depth, but meanwhile bring a new challenge to inversion of logging data that is formation model not be restricted to few possible numbers of layer such as typical three layers model. If the inappropriate starting models of deterministic and gradient-based methods are adopted may mislead geophysicists in interpretation of subsurface structure. For this purpose, to take advantage of richness of the measurements and deep depth of investigation across multiple formation boundaries, a trans-dimensional Markov chain Monte Carlo(MCMC) inversion algorithm has been developed that combines phase and attenuation measurements at various frequencies and spacings. Unlike conventional gradient-based inversion approaches, MCMC algorithm does not introduce bias from prior information and require any subjective choice of regularization parameter. A synthetic three layers model example demonstrates how the algorithm can be used to image the subsurface using the LWD data. When the tool is far from top boundary, the inversion clearly resolves the boundary position; that is where the boundary histogram shows a large peak. But the measurements cannot resolve the bottom boundary; the large spread between quantiles reflects the uncertainty associated with the bed resolution. As the tool moves closer to the top boundary, the middle layer and bottom layer are resolved and retained models are more similar, the uncertainty associated with these two beds decreases. From the spread observed between models, we can evaluate actual depth of investigation, uncertainty, and sensitivity, which is more useful then just a single best model.

X-ray magneto-optic KERR effect studies of spring magnet heterostructures.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kortright, J. B.; Kim, S.-K.; Fullerton, E. E.

2000-11-01

The complex 3-dimensional magnetization reversal behavior of Sin-Co/Fe exchange spring films is used to test the sensitivity of different resonant soft x-ray magneto-optical Kerr effect (MOKE) measurements to changes in longitudinal and transverse moments within the SOIIFe layer and to changes in these moments in depth within the Fe layer. As in the visible MOKE, changes in longitudinal and net transverse moments are resolved by measuring both Kerr rotation and intensity loops in the near the Fe 2p core resonance. These x-ray MOKE signals measured using linear incident polarization are more directly interpreted in terms of longitudinal and transverse momentsmore » than are the same signals measured using elliptical polarization. Varying photon energy near the Fe L3line is shown to be an effective means of resolving distinctly different reversal behavior at the top and bottom of the 20 nm thick Fe layer resulting from the strong exchange coupling at the Sin-Co/Fe interface. Measured x-ray MOKE spectra and signals are in qualitative agreement with those calculated using standard magneto-optical formalisms incorporating interference between different layers and measured helicity-dependent magneto-optical constants for Fe.« less

Fluvial landscapes evolution in the Gangkou River basin of southern Taiwan: Evidence from the sediment cores

NASA Astrophysics Data System (ADS)

Chen, Jia-Hong; Chyi, Shyh-Jeng; Yen, Jiun-Yee; Lin, Li-Hung; Yen, I.-Chin; Yu, Neng-Ti; Ho, Lih-Der; Jen, Chia-Hung

2017-04-01

The Gangkou River basin is the largest basin in the eastern Hengchun Peninsula of Taiwan. Its main river length is 31km and the basin area is 102sq. km. The width of the active channel is relatively narrow, but the valley from the middle to downstream is remarkably wide, indicating a feature of underfit stream. We drilled two sediment cores in the downstream area, including a 30m core (core-A) from a higher terrace, which is 14m above mean sea level, and a 20m core (core-B) from a lower terrace, which is 4m above mean sea level. Most of the sediments in the core-A are mud, which represents the flood plain facies, and 14C dates in the core-A range from 11ka to 7ka BP. Furthermore, the sediment layers reveal signals of marine events at the core depths of 5m to 11m by X-ray fluorescence. In the core-B, there is an erosional surface at the core depth of 5m. The age of the fluvial gravel layer above the erosional surface is about 0.4ka BP, and the mud layer top the surface is about 8.5ka BP. The preliminary results show that (1) as the tectonic uplift rate induced by the marine terraces around the basin is 1.0 to 2.5 mm/yr, and the accumulation rate of the mud layer in the basin is 6.7 to 8.7 mm/yr, the sediments infilling (more than 30-meters-thick) in the downstream area of the basin should be the results of the lower tectonic uplifting and the higher post-glacial sea level rise and; (2) the marine sediment layer with 14C dates of 7.5ka to 8.5ka BP is very likely the remain of the maximum flooding surface (MFS) in the early Holocene. These results indicate that the fluvial landscapes evolution of the basin was controlled by the sea-level; (3) the erosional surface in the core-B indicates the Gangkou River continuously erode the infilling sediments from 7ka to 0.4ka BP. Previous studies show that the sea-level around Taiwan gradually declined from its high stand since 6ka, we proposed that the continuous erosion was probably the results of tectonic uplifting and eustatic sea-level fall.

Determination of lead isotopes in a new Greenland deep ice core at the sub-picogram per gram level by thermal ionization mass spectrometry using an improved decontamination method.

PubMed

Han, Changhee; Burn-Nunes, Laurie J; Lee, Khanghyun; Chang, Chaewon; Kang, Jung-Ho; Han, Yeongcheol; Hur, Soon Do; Hong, Sungmin

2015-08-01

An improved decontamination method and ultraclean analytical procedures have been developed to minimize Pb contamination of processed glacial ice cores and to achieve reliable determination of Pb isotopes in North Greenland Eemian Ice Drilling (NEEM) deep ice core sections with concentrations at the sub-picogram per gram level. A PL-7 (Fuso Chemical) silica-gel activator has replaced the previously used colloidal silica activator produced by Merck and has been shown to provide sufficiently enhanced ion beam intensity for Pb isotope analysis for a few tens of picograms of Pb. Considering the quantities of Pb contained in the NEEM Greenland ice core and a sample weight of 10 g used for the analysis, the blank contribution from the sample treatment was observed to be negligible. The decontamination and analysis of the artificial ice cores and selected NEEM Greenland ice core sections confirmed the cleanliness and effectiveness of the overall analytical process. Copyright © 2015 Elsevier B.V. All rights reserved.

Entrainment versus Dilution in Tropical Deep Convection

DOE PAGES

Hannah, Walter M.

2017-11-01

In this paper, the distinction between entrainment and dilution is investigated with cloud-resolving simulations of deep convection in a tropical environment. A method for estimating the rate of dilution by entrainment and detrainment is presented and calculated for a series of bubble simulations with a range of initial radii. Entrainment generally corresponds to dilution of convection, but the two quantities are not well correlated. Core dilution by entrainment is significantly reduced by the presence of a shell of moist air around the core. Dilution by entrainment also increases with increasing updraft velocity but only for sufficiently strong updrafts. Entrainment contributesmore » significantly to the total net dilution, but detrainment and the various source/sink terms play large roles depending on the variable in question. Detrainment has a concentrating effect on average that balances out the dilution by entrainment. The experiments are also used to examine whether entrainment or dilution scale with cloud radius. The results support a weak negative relationship for dilution but not for entrainment. The sensitivity to resolution is briefly discussed. A toy Lagrangian thermal model is used to demonstrate the importance of the cloud shell as a thermodynamic buffer to reduce the dilution of the core by entrainment. Finally, the results suggest that explicit cloud heterogeneity may be a useful consideration for future convective parameterization development.« less

Enhanced near-infrared photoacoustic imaging of silica-coated rare-earth doped nanoparticles.

PubMed

Sheng, Yang; Liao, Lun-De; Bandla, Aishwarya; Liu, Yu-Hang; Yuan, Jun; Thakor, Nitish; Tan, Mei Chee

2017-01-01

Near-infrared photoacoustic (PA) imaging is an emerging diagnostic technology that utilizes the tissue transparent window to achieve improved contrast and spatial resolution for deep tissue imaging. In this study, we investigated the enhancement effect of the SiO 2 shell on the PA property of our core/shell rare-earth nanoparticles (REs) consisting of an active rare-earth doped core of NaYF 4 :Yb,Er (REDNPs) and an undoped NaYF 4 shell. We observed that the PA signal amplitude increased with SiO 2 shell thickness. Although the SiO 2 shell caused an observed decrease in the integrated fluorescence intensity due to the dilution effect, fluorescence quenching of the rare earth emitting ions within the REDNPs cores was successfully prevented by the undoped NaYF 4 shell. Therefore, our multilayer structure consisting of an active core with successive functional layers was demonstrated to be an effective design for dual-modal fluorescence and PA imaging probes with improved PA property. The result from this work addresses a critical need for the development of dual-modal contrast agent that advances deep tissue imaging with high resolution and signal-to-noise ratio. Copyright © 2016 Elsevier B.V. All rights reserved.

Investigation on the interfacial chemical state and band alignment for the sputtering-deposited CaF2/p-GaN heterojunction by angle-resolved X-ray photoelectron spectroscopy

NASA Astrophysics Data System (ADS)

Zhang, Kexiong; Liao, Meiyong; Sumiya, Masatomo; Koide, Yasuo; Sang, Liwen

2016-11-01

The interfacial chemical state and the band alignment of the sputtering-deposited CaF2/p-GaN hetero-structure were investigated by angle-resolved X-ray photoelectron spectroscopy. The dependence of Ga 3p core-level positions on the collection angles proves that the downward band bending of p-GaN is reduced from 1.51 to 0.85 eV after the deposition of CaF2, which may be due to the reduction of Mg-Ga-O-related interface states by the oxygen-free deposition of CaF2. The band gap of sputtering-deposited CaF2 is estimated to be about 7.97 eV with a potential gradient of 0.48 eV obtained by the variation of the Ca 2p3/2 position on different collection angles. By taking into account the p-GaN surface band bending and potential gradient in the CaF2 layer, large valence and conduction band offsets of 2.66 ± 0.20 and 1.92 ± 0.20 eV between CaF2 and p-GaN are obtained. These results indicate that CaF2 is a promising gate dielectric layer on the p-GaN for the application of metal-insulator-semiconductor devices.

Properties of the Lunar Interior: Preliminary Results from the GRAIL Mission

NASA Technical Reports Server (NTRS)

Williams, James G.; Konopliv, Alexander S.; Asmar, Sami W.; Lemoine, Frank G.; Melosh, H. Jay; Neumann, Gregory A.; Phillips, Roger J.; Smith, David E.; Solomon, Sean C.; Watkins, Michael M.;

CO Signatures in Subtropical Convective Clouds and Anvils During CRYSTAL-FACE: An Analysis of Convective Transport and Entertainment Using Observations and a Cloud-Resolving Model

NASA Technical Reports Server (NTRS)

Lopez, Jimena P.; Fridlind, Ann M.; Jost, Hans-Jurg; Loewenstein, Max; Ackerman, Andrew S.; Campos, Teresa L.; Weinstock, Elliot M.; Sayres, David S.; Smith, Jessica B.; Pittman, Jasna V.;

CO Signatures in Subtropical Convective Clouds and Anvils during CRYSTAL-FACE: An Analysis of Convective Transport and Entrainment using Observations and a Cloud-Resolving Model

NASA Technical Reports Server (NTRS)

Lopez, Jimena P.; Fridlind, Ann M.; Jost, Hans-Juerg; Loewenstein, Max; Ackerman, Andrew S.; Campos, Teresa L.; Weinstock, Elliot M.; Sayres, David S.; Smith, Jessica B.; Pittman, Jasna V.

2006-01-01

Convective systems are an important mechanism in the transport of boundary layer air into the upper troposphere. The Cirrus Regional Study of Tropical Anvils and Cirrus Layers-Florida Area Cirrus Experiment (CRYSTAL-FACE) campaign, in July 2002, was developed as a comprehensive atmospheric mission to improve knowledge of subtropical cirrus systems and their roles in regional and global climate. In situ measurements of carbon monoxide (CO), water vapor (H2Ov), and total water (H2Ot) aboard NASA's WB-57F aircraft and CO aboard the U.S. Navy's Twin Otter aircraft were obtained to study the role of convective transport. Three flights sampled convective outflow on 11, 16 and 29 July found varying degrees of CO enhancement relative to the free troposphere. A cloud-resolving model used the in situ observations and meteorological fields to study these three systems. Several methods of filtering the observations were devised here using ice water content, relative humidity with respect to ice, and particle number concentration as a means to statistically sample the model results to represent the flight tracks. A weighted histogram based on ice water content observations was then used to sample the simulations for the three flights. In addition, because the observations occurred in the convective outflow cirrus and not in the storm cores, the model was used to estimate the maximum CO within the convective systems. In general, anvil-level air parcels contained an estimated 20-40% boundary layer air in the analyzed storms.

Shock compression of stishovite and melting of silica at planetary interior conditions

NASA Astrophysics Data System (ADS)

Millot, M.; Dubrovinskaia, N.; Černok, A.; Blaha, S.; Dubrovinsky, L.; Braun, D. G.; Celliers, P. M.; Collins, G. W.; Eggert, J. H.; Jeanloz, R.

2015-01-01

Deep inside planets, extreme density, pressure, and temperature strongly modify the properties of the constituent materials. In particular, how much heat solids can sustain before melting under pressure is key to determining a planet’s internal structure and evolution. We report laser-driven shock experiments on fused silica, α-quartz, and stishovite yielding equation-of-state and electronic conductivity data at unprecedented conditions and showing that the melting temperature of SiO2 rises to 8300 K at a pressure of 500 gigapascals, comparable to the core-mantle boundary conditions for a 5-Earth mass super-Earth. We show that mantle silicates and core metal have comparable melting temperatures above 500 to 700 gigapascals, which could favor long-lived magma oceans for large terrestrial planets with implications for planetary magnetic-field generation in silicate magma layers deep inside such planets.

Planetary science. Shock compression of stishovite and melting of silica at planetary interior conditions.

PubMed

Millot, M; Dubrovinskaia, N; Černok, A; Blaha, S; Dubrovinsky, L; Braun, D G; Celliers, P M; Collins, G W; Eggert, J H; Jeanloz, R

2015-01-23

Deep inside planets, extreme density, pressure, and temperature strongly modify the properties of the constituent materials. In particular, how much heat solids can sustain before melting under pressure is key to determining a planet's internal structure and evolution. We report laser-driven shock experiments on fused silica, α-quartz, and stishovite yielding equation-of-state and electronic conductivity data at unprecedented conditions and showing that the melting temperature of SiO2 rises to 8300 K at a pressure of 500 gigapascals, comparable to the core-mantle boundary conditions for a 5-Earth mass super-Earth. We show that mantle silicates and core metal have comparable melting temperatures above 500 to 700 gigapascals, which could favor long-lived magma oceans for large terrestrial planets with implications for planetary magnetic-field generation in silicate magma layers deep inside such planets. Copyright © 2015, American Association for the Advancement of Science.

A 400-year ice core melt layer record of summertime warming in the Alaska Range

NASA Astrophysics Data System (ADS)

Winski, D.; Osterberg, E. C.; Kreutz, K. J.; Wake, C. P.; Ferris, D. G.; Campbell, S. W.; Baum, M.; Raudzens Bailey, A.; Birkel, S. D.; Introne, D.; Handley, M.

2017-12-01

Warming in high-elevation regions has socially relevant impacts on glacier mass balance, water resources, and sensitive alpine ecosystems, yet very few high-elevation temperature records exist from the middle or high latitudes. While many terrestrial paleoclimate records provide critical temperature records from low elevations over recent centuries, melt layers preserved in alpine glaciers present an opportunity to develop calibrated, annually-resolved temperature records from high elevations. We present a 400-year temperature record based on the melt-layer stratigraphy in two ice cores collected from Mt. Hunter in the Central Alaska Range. The ice core record shows a 60-fold increase in melt frequency and water equivalent melt thickness between the pre-industrial period (before 1850) and present day. We calibrate the melt record to summer temperatures based on local and regional weather station analyses, and find that the increase in melt production represents a summer warming of at least 2° C, exceeding rates of temperature increase at most low elevation sites in Alaska. The Mt. Hunter melt layer record is significantly (p<0.05) correlated with surface temperatures in the central tropical Pacific through a Rossby-wave like pattern that induces high temperatures over Alaska. Our results show that rapid alpine warming has taken place in the Alaska Range for at least a century, and that conditions in the tropical oceans contribute to this warming.

Identification And Survival Of Bacteriohopanepolyol In A Hot Spring Microbial Mat

NASA Technical Reports Server (NTRS)

Janke, Linda L.; Chang, Sherwood (Technical Monitor)

1995-01-01

The polar lipids of a hot spring microbial mat located in Yellowstone National Park were examined for the presence of bacteriohopanepolvols (BHP). BHP are a group of molecules consisting of a hopanoid (peotacyclic triterpene) linked via a n-alkyl polyhydroxylated chain to a variety of polar end groups. BHP have been isolated in varying amounts from phylogenetically diverse eubacterial groups including cyanobacteria, methanotrophs and the Rhodospirillaceae. The hopanoids are excellent biomarkers and have been detected in sedimentary rocks as old as 1.7 bya. In order to interpret the ancient organic record, it is important to understand the abundance, source and fate of such biomarker compounds in microbial mats. A 40 sq cm mat section was taken from a 52 to 55 C site in the effluent channel of Octopus Spring and was sampled vertically over approximately 16 mm. The first 5-6 mm was sectioned into a top green layer (310 mg dry weight) and several subjacent, deep orange layers (240 and 250 mg, respectively). The lower 10 mm of the mat was sectioned into two gelatinous orange layers containing a siliceous gritty material (260 and 440 mg) which increased with depth, and a bottom layer composed almost exclusively of siliceous sinter (4.1 g). The progressive decrease in total organic carbon from 45% in the top green layer to only 4% in the bottom layer reflects the observed increase in siliceous deposition. GC-MS analysis of the phospholipid and glycolipid fatty acids yielded predominantly saturated normal chain acids, n-15 to n-18, and iso-branched acids, i-15 to i-17. Small amounts of unsaturated fatty acids (16:1, two positional isomers of 18:1, and two cyclopropyl acids, C(sub 17) and C(sub 19)) were present mainly in the top layer. Esterified fatty acid which is a good index for intact cellular membrane, i.e. viable organisms, was highest in the top two layers (203 and 231 micro g/mg total lipid, respectively) and gradually decreased to 66 micro g/mg total lipid in the bottom layer. Small amounts of BHP were present in all six layers, however in this case, BHP was lowest in the top green and subjacent deep-orange layers (118 and 172 micro g/mg total lipid, respectively) and increased with depth reaching almost 400 micro g/mg in the bottom two layers. This data suggest that BHP are survivina the initial phase of mat degradation and may be preferentially enriched in any organic record of such thermal environments. The relatively low level of BHP in the top layer also suggests that cyanobacteria may not be the major source of BHP in this mat. Since Chloroflexus a major component of the deep-orange layer has been reported to lack BHP, this material may prove a valuable biomarker for some other mat inhabitant. Further isotopic characterization of this BHP should help resolve this finding.

Paleomagnetism of the Oman Ophiolite: New Results from Oman Drilling Project Cores

NASA Astrophysics Data System (ADS)

Horst, A. J.; Till, J. L.; Koornneef, L.; Usui, Y.; Kim, H.; Morris, A.

2017-12-01

The Oman Drilling Project drilled holes at four sites in a transect through the southern massifs of the Samail ophiolite, and recovered 1500 m of igneous and metamorphic rocks. We focus on three sites from the oceanic crustal section including lower layered gabbros (GT1A), the mid-crustal layered to foliated gabbro transition (GT2A), and the shallower transition from sheeted dikes to varitextured gabbros (GT3A). Detailed core descriptions, analyses, and paleomagnetic measurements, were made on D/V Chikyu from July to September 2017 to utilize the core laboratory facilities similar to IODP expeditions. Shipboard measurements included anisotropy of magnetic susceptibility (AMS) and alternating field and thermal demagnetization of 597 discrete samples. Sample demagnetization behavior is varied from each of the cores, with some revealing multiple components of magnetization, and others yielding nearly univectorial data. The interpretation of results from the lower crustal cores is complicated by the pervasive presence of secondary magnetite. In almost all samples, a stable component was resolved (interpreted as a characteristic remanent magnetization) after removal of a lower-coercivity or lower unblocking-temperature component. The inclinations of the stable components in the core reference frame are very consistent in Hole GT1A. However, a transition from negative to positive inclinations in GT2A suggests some structural complexity, possibly as a result of intense late faulting activity. Both abrupt and gradual transitions between multiple zones of negative and positive inclinations occur in Hole GT3A. Interpretation and direct comparison of remanence between drill sites is difficult as recovered core pieces currently remain azimuthally unoriented, and GT2A was drilled at a plunge of 60°, whereas GT1A and GT3A were both drilled vertically. Work is ongoing to use borehole imagery to reorient the core pieces and paleomagnetic data into a geographic in situ reference frame. We will present an overview of preliminary AMS and remanence data that will be used in the future to 1) document deformational histories, 2) characterize magmatic flow directions at different structural levels, and 3) identify the magnetic mineralogy of remanence carriers throughout the oceanic crustal section.

An integrated model for Jupiter's dynamo action and mean jet dynamics

NASA Astrophysics Data System (ADS)

Gastine, Thomas; Wicht, Johannes; Duarte, Lucia; Heimpel, Moritz

2014-05-01

Data from various space crafts revealed that Jupiter's large scale interior magnetic field is very Earth-like. This is surprising since numerical simulations have demonstrated that, for example, the radial dependence of density, electrical conductivity and other physical properties, which is only mild in the iron cores of terrestrial planets but very drastic in gas planets, can significantly affect the interior dynamics. Jupiter's dynamo action is thought to take place in the deeper envelope where hydrogen, the main constituent of Jupiter's atmosphere, assumes metallic properties. The potential interaction between the observed zonal jets and the deeper dynamo region is an unresolved problem with important consequences for the magnetic field generation. Here we present the first numerical simulation that is based on recent interior models and covers 99% of the planetary radius (below the 1 bar level). A steep decease in the electrical conductivity over the outer 10% in radius allowed us to model both the deeper metallic region and the outer molecular layer in an integrated approach. The magnetic field very closely reproduces Jupiter's known large scale field. A strong equatorial zonal jet remains constrained to the molecular layer while higher latitude jets are suppressed by Lorentz forces. This suggests that Jupiter's higher latitude jets remain shallow and are driven by an additional effect not captured in our deep convection model. The dynamo action of the equatorial jet produces a band of magnetic field located around the equator. The unprecedented magnetic field resolution expected from the Juno mission will allow to resolve this feature allowing a direct detection of the equatorial jet dynamics at depth. Typical secular variation times scales amount to around 750 yr for the dipole contribution but decrease to about 5 yr at the expected Juno resolution (spherical harmonic degree 20). At a nominal mission duration of one year Juno should therefore be able to directly detect secular variation effects in the higher field harmonics.

Shifts among Eukaryota, Bacteria, and Archaea define the vertical organization of a lake sediment.

PubMed

Wurzbacher, Christian; Fuchs, Andrea; Attermeyer, Katrin; Frindte, Katharina; Grossart, Hans-Peter; Hupfer, Michael; Casper, Peter; Monaghan, Michael T

2017-04-08

Lake sediments harbor diverse microbial communities that cycle carbon and nutrients while being constantly colonized and potentially buried by organic matter sinking from the water column. The interaction of activity and burial remained largely unexplored in aquatic sediments. We aimed to relate taxonomic composition to sediment biogeochemical parameters, test whether community turnover with depth resulted from taxonomic replacement or from richness effects, and to provide a basic model for the vertical community structure in sediments. We analyzed four replicate sediment cores taken from 30-m depth in oligo-mesotrophic Lake Stechlin in northern Germany. Each 30-cm core spanned ca. 170 years of sediment accumulation according to 137 Cs dating and was sectioned into layers 1-4 cm thick. We examined a full suite of biogeochemical parameters and used DNA metabarcoding to examine community composition of microbial Archaea, Bacteria, and Eukaryota. Community β-diversity indicated nearly complete turnover within the uppermost 30 cm. We observed a pronounced shift from Eukaryota- and Bacteria-dominated upper layers (<5 cm) to Bacteria-dominated intermediate layers (5-14 cm) and to deep layers (>14 cm) dominated by enigmatic Archaea that typically occur in deep-sea sediments. Taxonomic replacement was the prevalent mechanism in structuring the community composition and was linked to parameters indicative of microbial activity (e.g., CO 2 and CH 4 concentration, bacterial protein production). Richness loss played a lesser role but was linked to conservative parameters (e.g., C, N, P) indicative of past conditions. By including all three domains, we were able to directly link the exponential decay of eukaryotes with the active sediment microbial community. The dominance of Archaea in deeper layers confirms earlier findings from marine systems and establishes freshwater sediments as a potential low-energy environment, similar to deep sea sediments. We propose a general model of sediment structure and function based on microbial characteristics and burial processes. An upper "replacement horizon" is dominated by rapid taxonomic turnover with depth, high microbial activity, and biotic interactions. A lower "depauperate horizon" is characterized by low taxonomic richness, more stable "low-energy" conditions, and a dominance of enigmatic Archaea.

Aligning and synchronization of MIS5 proxy records from Lake Ohrid (FYROM) with independently dated Mediterranean archives: implications for DEEP core chronology

NASA Astrophysics Data System (ADS)

Zanchetta, Giovanni; Regattieri, Eleonora; Giaccio, Biagio; Wagner, Bernd; Sulpizio, Roberto; Francke, Alex; Vogel, Hendrik; Sadori, Laura; Masi, Alessia; Sinopoli, Gaia; Lacey, Jack H.; Leng, Melanie J.; Leicher, Niklas

2016-05-01

The DEEP site sediment sequence obtained during the ICDP SCOPSCO project at Lake Ohrid was dated using tephrostratigraphic information, cyclostratigraphy, and orbital tuning through the marine isotope stages (MIS) 15-1. Although this approach is suitable for the generation of a general chronological framework of the long succession, it is insufficient to resolve more detailed palaeoclimatological questions, such as leads and lags of climate events between marine and terrestrial records or between different regions. Here, we demonstrate how the use of different tie points can affect cyclostratigraphy and orbital tuning for the period between ca. 140 and 70 ka and how the results can be correlated with directly/indirectly radiometrically dated Mediterranean marine and continental proxy records. The alternative age model presented here shows consistent differences with that initially proposed by Francke et al. (2015) for the same interval, in particular at the level of the MIS6-5e transition. According to this new age model, different proxies from the DEEP site sediment record support an increase of temperatures between glacial to interglacial conditions, which is almost synchronous with a rapid increase in sea surface temperature observed in the western Mediterranean. The results show how a detailed study of independent chronological tie points is important to align different records and to highlight asynchronisms of climate events. Moreover, Francke et al. (2016) have incorporated the new chronology proposed for tephra OH-DP-0499 in the final DEEP age model. This has reduced substantially the chronological discrepancies between the DEEP site age model and the model proposed here for the last glacial-interglacial transition.

Using Intel Xeon Phi to accelerate the WRF TEMF planetary boundary layer scheme

NASA Astrophysics Data System (ADS)

Mielikainen, Jarno; Huang, Bormin; Huang, Allen

2014-05-01

The Weather Research and Forecasting (WRF) model is designed for numerical weather prediction and atmospheric research. The WRF software infrastructure consists of several components such as dynamic solvers and physics schemes. Numerical models are used to resolve the large-scale flow. However, subgrid-scale parameterizations are for an estimation of small-scale properties (e.g., boundary layer turbulence and convection, clouds, radiation). Those have a significant influence on the resolved scale due to the complex nonlinear nature of the atmosphere. For the cloudy planetary boundary layer (PBL), it is fundamental to parameterize vertical turbulent fluxes and subgrid-scale condensation in a realistic manner. A parameterization based on the Total Energy - Mass Flux (TEMF) that unifies turbulence and moist convection components produces a better result that the other PBL schemes. For that reason, the TEMF scheme is chosen as the PBL scheme we optimized for Intel Many Integrated Core (MIC), which ushers in a new era of supercomputing speed, performance, and compatibility. It allows the developers to run code at trillions of calculations per second using the familiar programming model. In this paper, we present our optimization results for TEMF planetary boundary layer scheme. The optimizations that were performed were quite generic in nature. Those optimizations included vectorization of the code to utilize vector units inside each CPU. Furthermore, memory access was improved by scalarizing some of the intermediate arrays. The results show that the optimization improved MIC performance by 14.8x. Furthermore, the optimizations increased CPU performance by 2.6x compared to the original multi-threaded code on quad core Intel Xeon E5-2603 running at 1.8 GHz. Compared to the optimized code running on a single CPU socket the optimized MIC code is 6.2x faster.

Partitioning of Oxygen During Core Formation on Earth and Mars

NASA Astrophysics Data System (ADS)

Rubie, D. C.; Gessmann, C. K.; Frost, D. J.

2003-12-01

Core formation on Earth and Mars involved the physical separation of Fe-Ni metal alloy from silicate, most likely in deep magma oceans. Although core-formation models explain many aspects of mantle geochemistry, they do not account for large differences between the compositions of the mantles of Earth ( ˜8 wt% FeO) and Mars ( ˜18 wt% FeO) or the much smaller mass fraction of the Martian core. Here we explain these differences using new experimental results on the solubility of oxygen in liquid Fe-Ni alloy, which we have determined at 5-23 GPa, 2100-2700 K and variable oxygen fugacities using a multianvil apparatus. Oxygen solubility increases with increasing temperature and oxygen fugacity and decreases with increasing pressure. Thus, along a high temperature adiabat (e.g. after formation of a deep magma ocean on Earth), oxygen solubility is high at depths up to about 2000 km but decreases strongly at greater depths where the effect of high pressure dominates. For modeling oxygen partitioning during core formation, we assume that Earth and Mars both accreted from oxidized chondritic material with a silicate fraction initially containing around 18 wt% FeO. In a terrestrial magma ocean, 1200-2000 km deep, high temperatures resulted in the extraction of FeO from the silicate magma ocean, due to the high solubility of oxygen in the segregating metal, leaving the mantle with its present FeO content of ˜8 wt%. Lower temperatures of a Martian magma ocean resulted in little or no extraction of FeO from the mantle, which thus remained unchanged at about 18 wt%. The mass fractions of segregated metal are consistent with the mass fraction of the Martian core being small relative to that of the Earth. FeO extracted from the Earth's magma ocean by segregating core-forming liquid may have contributed to chemical heterogeneities in the lowermost mantle, a FeO-rich D'' layer and the light element budget of the core.

Towards European-scale convection-resolving climate simulations with GPUs: a study with COSMO 4.19

NASA Astrophysics Data System (ADS)

Leutwyler, David; Fuhrer, Oliver; Lapillonne, Xavier; Lüthi, Daniel; Schär, Christoph

2016-09-01

The representation of moist convection in climate models represents a major challenge, due to the small scales involved. Using horizontal grid spacings of O(1km), convection-resolving weather and climate models allows one to explicitly resolve deep convection. However, due to their extremely demanding computational requirements, they have so far been limited to short simulations and/or small computational domains. Innovations in supercomputing have led to new hybrid node designs, mixing conventional multi-core hardware and accelerators such as graphics processing units (GPUs). One of the first atmospheric models that has been fully ported to these architectures is the COSMO (Consortium for Small-scale Modeling) model.Here we present the convection-resolving COSMO model on continental scales using a version of the model capable of using GPU accelerators. The verification of a week-long simulation containing winter storm Kyrill shows that, for this case, convection-parameterizing simulations and convection-resolving simulations agree well. Furthermore, we demonstrate the applicability of the approach to longer simulations by conducting a 3-month-long simulation of the summer season 2006. Its results corroborate the findings found on smaller domains such as more credible representation of the diurnal cycle of precipitation in convection-resolving models and a tendency to produce more intensive hourly precipitation events. Both simulations also show how the approach allows for the representation of interactions between synoptic-scale and meso-scale atmospheric circulations at scales ranging from 1000 to 10 km. This includes the formation of sharp cold frontal structures, convection embedded in fronts and small eddies, or the formation and organization of propagating cold pools. Finally, we assess the performance gain from using heterogeneous hardware equipped with GPUs relative to multi-core hardware. With the COSMO model, we now use a weather and climate model that has all the necessary modules required for real-case convection-resolving regional climate simulations on GPUs.

Ion Structure Near a Core-Shell Dielectric Nanoparticle

NASA Astrophysics Data System (ADS)

Ma, Manman; Gan, Zecheng; Xu, Zhenli

2017-02-01

A generalized image charge formulation is proposed for the Green's function of a core-shell dielectric nanoparticle for which theoretical and simulation investigations are rarely reported due to the difficulty of resolving the dielectric heterogeneity. Based on the formulation, an efficient and accurate algorithm is developed for calculating electrostatic polarization charges of mobile ions, allowing us to study related physical systems using the Monte Carlo algorithm. The computer simulations show that a fine-tuning of the shell thickness or the ion-interface correlation strength can greatly alter electric double-layer structures and capacitances, owing to the complicated interplay between dielectric boundary effects and ion-interface correlations.

Patterns of volcanism, weathering, and climate history from high-resolution geochemistry of the BINGO core, Mono Lake, California, USA

NASA Astrophysics Data System (ADS)

Zimmerman, S. R.; Starratt, S.; Hemming, S. R.

2012-12-01

Mono Lake, California is a closed-basin lake on the east side of the Sierra Nevada, and inflow from snowmelt dominates the modern hydrology. Changes in wetness during the last glacial period (>12,000 years ago) and over the last 2,000 years have been extensively described, but are poorly known for the intervening period. We have recovered a 6.25 m-long core from ~3 m of water in the western embayment of Mono Lake, which is shown by initial radiocarbon dates to cover at least the last 10,000 years. The sediments of the core are variable, ranging from black to gray silts near the base, laminated olive-green silt through the center, to layers of peach-colored carbonate nodules interbedded with gray and olive silts and pea-green organic ooze. Volcanic tephras from <1 to 8 cm thick occur throughout. Results of 0.5 cm-resolution scanning-X-Ray fluoresence (XRF) analysis describe changes in lithology due to volcanism, erosion, and changing lake level and chemistry. Titanium (Ti) is chemically and biologically unreactive, and records the dominant input, from weathering of Sierra Nevada granite to the west and Miocene and Pliocene volcanic rocks of the Bodie and Adobe Hills to the north, east, and south. The rhyolitic tephras of the Mono-Inyo Craters are much lower in TiO2 than the bedrock (<0.1% vs. 1-2%), and are an unweathered source of K2O (3.5-5%), and thus form dramatic peaks in the K/Ti ratio. Calcium (Ca) and Sr are well correlated throughout the core, and normalization of both by K (detritus + tephra) corresponds with occurrence of carbonate-rich layers. These are a mixture of authigenic precipitates directly precipitated and eroded into the lake during periods of regression. The lowermost 1.5 m of the BINGO core contains the highest proportion of detrital input to Mono Lake over the last ~12,000 years, recorded by high Si, Ti, K, and Fe, in black to dark-gray, fine-grained silts above 10 cm of pure light gray silt. Based on radiocarbon dates of >10,000 calibrated years before present (cal yr BP) higher in the core, and significant disruption of the fine layers, this interval likely indicates a relatively deep lake persisting into the early Holocene, after the initial dramatic regression from late Pleistocene levels. The finely laminated olive-green silt of the period ~10,700 to ~7500 cal yr BP is very homogenous chemically, probably indicating a stable, stratified lake and a relatively wet climate. This section merits mm-scale scanning and petrographic examination in the future. The upper boundary of the laminated section shows rising Ca/K and decreasing Ti and Si/K, marking the appearance of authigenic carbonate layers. After ~7500 cal yr BP, the sediment in BINGO becomes highly variable, with increased occurrence of tephra layers and carbonate, indicating a lower and more variable lake level. A short interval of olive-green, laminated fine sand/silt just above a radiocarbon date of 3870 ± 360 cal yr BP may record the Dechambeau Ranch highstand of Stine (1990; PPP v. 78 pp 333-381), and is marked by a distinct low in Ca/K, lasting ~1000 years. The low terminates in a dramatic rise in Ca/K to some of the highest levels in the core, suggesting a period of ~1000 years of extremely dry climate, dwarfing all of the variability in Ca/K, and likely lake level, over the last 2000 years.

Application of Deep Learning to Detect Precursors of Tropical Cyclone

NASA Astrophysics Data System (ADS)

Matsuoka, D.; Nakano, M.; Sugiyama, D.; Uchida, S.

2017-12-01

Tropical cyclones (TCs) affect significant damage to human society. Predicting TC generation as soon as possible is important issue in both academic and social perspectives. In the present work, we investigate the probability of predicting TCs seven days prior using deep neural networks. The training data is produced from 30-year cloud resolving global atmospheric simulation (NICAM) with 14 km horizontal resolution (Kodama et al., 2015). We employed a TCs tracking algorithm (Sugi et al., 2002; Nakano et al., 2015) to NICAM simulation data in order to generate supervised cloud images (horizontal sizes are 800-1,000km). We generate approximately one million images of "TCs (include their precursors)" and "not TCs (low pressure clouds)". We generate ten types of image classifier based on 2-dimensional convolutional neural network, includes four convolutional layers, three pooling layers and two fully connected layers. The final predicted results are obtained by these ensemble mean values. Generated classifiers are applied to untrained global simulation data (four million test images). As a result, we succeeded in predicting the precursors of TCs seven and five days before their formation with a Recall of 88.6% and 89.6% (Precision is 11.4%), respectively.

On the relationship between satellite-estimated bio-optical and thermal properties in the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Jolliff, Jason K.; Kindle, John C.; Penta, Bradley; Helber, Robert; Lee, Zhongping; Shulman, Igor; Arnone, Robert; Rowley, Clark D.

2008-03-01

Three years of Sea-viewing Wide Field-of-view Sensor (SeaWiFS) ocean color data were combined with three-dimensional thermal fields generated by the U.S. Navy's Modular Ocean Data Assimilation System (MODAS) in order to examine the interdependencies between bio-optical fields and their relationship to seasonal and mesoscale changes in upper ocean thermal structure. The combined data set suggests that the oceanic boundary layer within the Gulf of Mexico may be broadly defined by two seasonally occurring bio-thermal periods. A winter mixing period, characterized by net heat losses to the atmosphere, deepening of the isothermal layer depth, and annual maxima of satellite-estimated colored detrital matter (CDM) absorption coefficients and surface pigment concentration, was followed by a thermally stratified period characterized by net surface ocean heating, reduced isothermal layer depths, and annual minima in surface bio-optical fields. Variability in the interdependencies of ocean color products was used to diagnose an attendant shift in the size-structure of surface phytoplankton communities as well as identify CDM as the constituent responsible for the majority of blue-light absorption in Gulf of Mexico surface waters. The mesoscale circulation, as resolved by MODAS thermal fields into cold and warm-core eddies, appears to significantly modulate the seasonal bio-optical cycle of CDM absorption and surface pigment concentration. An empirical model was developed to describe CDM absorption as a function of upper ocean thermal energy. The model accounted for nearly half the variance in the satellite-estimate of this bio-optical variable. Large mismatches between the model and satellite data implied episodes of shelf water export to the deep Gulf of Mexico.

Marine magnetotellurics imaged no distinct plume beneath the Tristan da Cunha hotspot in the southern Atlantic Ocean

NASA Astrophysics Data System (ADS)

Baba, Kiyoshi; Chen, Jin; Sommer, Malte; Utada, Hisashi; Geissler, Wolfram H.; Jokat, Wilfried; Jegen, Marion

2017-10-01

The Tristan da Cunha (TDC) is a volcanic island located above a prominent hotspot in the Atlantic Ocean. Many geological and geochemical evidences support a deep origin of the mantle material feeding the hotspot. However, the existence of a plume has not been confirmed as an anomalous structure in the mantle resolved by geophysical data because of lack of the observations in the area. Marine magnetotelluric and seismological observations were conducted in 2012-2013 to examine the upper mantle structure adjacent to TDC. The electrical conductivity structure of the upper mantle beneath the area was investigated in this study. Three-dimensional inversion analysis depicted a high conductive layer at 120 km depth but no distinct plume-like vertical structure. The conductive layer is mostly flat independently on seafloor age and bulges upward beneath the lithospheric segment where the TDC islands are located compared to younger segment south of the TDC Fracture Zone, while the bathymetry is rather deeper than prediction for the northern segment. The apparent inconsistency between the absence of vertical structure in this study and geochemical evidences on deep origin materials suggests that either the upwelling is too small and/or weak to be resolved by the current data set or that the upwelling takes place elsewhere outside of the study area. Other observations suggest that 1) the conductivity of the upper mantle can be explained by the fact that the mantle above the high conductivity layer is depleted in volatiles as the result of partial melting beneath the spreading ridge, 2) the potential temperature of the segments north of the TDC Fracture Zone is lower than that of the southern segment at least during the past 30 Myr.

In-situ observation of bubble trapping in polar firn

NASA Astrophysics Data System (ADS)

Florian Schaller, Christoph; Freitag, Johannes; Sowers, Todd; Vinther, Bo; Weinhart, Alexander; Eisen, Olaf

2017-04-01

The air trapped in polar ice cores is not a direct record of past atmospheric composition but is strongly influenced by the process of firnification as bubbles are only sealed at a certain point, when the respective horizontal layer reaches a so called "critical" porosity. In order to investigate this process, we performed high-resolution (approximately 25 μm) 3D-XCT measurements of the complete lock-in zone for two polar ice cores representing opposite extremes of the temperature and accumulation rate range: B53, close to Dome Fuji, East Antarctica and RECAP_S2, Renland, Greenland. For every 1m core segment, we scanned a minimum number of five sections of approximately 3.5cm height of the full core diameter with a focus on homogenous layers. This allows us to non-destructively deduce detailed profiles of open and closed porosity on a solid statistical basis. For each of the cores individually, we find that the trapping of bubbles in a single layer is solely determined by its total porosity and thereby independent of depth. We can confirm the existence of a distinct Schwander-type relation of closed and total porosity. Even though the two cores deviate from each other significantly in critical porosity, 0.0907 for B53 compared to 0.1025 for RECAP_S2, we observe many similarities. We hypothesize, that the determining factors of bubble trapping are the average size and variability of pore space structures. This could potentially allow the reconstruction of past close-off porosities from the remaining pore structures in deep ice, e.g. from bubble number densities.

Giga-LES of Hector the Convector: How Shallow Convection over Island Developed into Very Deep Convection up to the Stratosphere

NASA Astrophysics Data System (ADS)

Dauhut, T.; Chaboureau, J. P.; Escobar, J.; Mascart, P. J.

2016-12-01

The hydration of the stratosphere by Hector the Convector, observed on 30 November 2005 over the Tiwi Islands, Australia, is investigated using a Giga Large-Eddy Simulation with a 100-m cubic mesh. Individual updrafts defined as 3D objects with vertical velocity above 10 m/s are identified. Among the 20,000 updrafts identified during the most intense phase, a dozen was more-than-4-km tall. The two tallest accounted for more than 90 % of the total vertical mass flux through the Tropical Tropopause Layer. Their locations were determined by low-level convergence lines first created by the sea breeze in the morning, on which popped up shallow convection, then enhanced by cold pools due to congestus and finally reinforced each other as they moved inland and intersected. The two tallest updrafts that overshot the stratosphere were contrasted with those occurring one hour earlier and later. They present larger width (up to 8 km), greater buoyancy (up to 0.1 m/s²), stronger vertical velocities (up to 50 m/s) and larger hydrometeor contents (more than 10 g/kg). They kept their core weakly diluted on their way to the stratosphere with an entrainment rate as low as 0.08 /km. Both the low-level convergence lines intensified by cold pools and the reduced mixing in the troposphere are found to be determinant for the transition from shallow to deep and from deep to very deep convection. This study was supported by the StratoClim project.

Rapid Transport of Stratospheric Ozone into the Planetary Boundary Layer over the Rocky Mountains

NASA Astrophysics Data System (ADS)

Skerlak, B.; Sprenger, M.; Pfahl, S.; Wernli, H.

2013-12-01

Stratosphere-troposphere exchange (STE) has important impacts on atmospheric chemistry: it changes the oxidative capacity of the troposphere and affects the climate system through the exchange of water vapor and ozone. Although a large part of tropospheric ozone is produced photochemically, significant amounts of stratospheric ozone can be brought into the troposphere during STE events. The relative importance of these two sources depends on the location of interest and transport characteristics. Of particular interest are so-called deep exchange events where ozone-rich stratospheric air reaches the planetary boundary layer (PBL) within a few days (deep STT). This rapid vertical transport can contribute to ozone concentrations at ground level which can impair plant and human physiology. It is therefore not only important to quantify the ozone flux across the tropopause but also to investigate the transport pathways after the crossing to identify affected areas at ground. Using a Lagrangian methodology and 33 years of ERA-Interim reanalysis data, we have compiled a global climatology of STE from which the mountainous areas in western North America can be identified as a 'hot spot' of deep STT, especially in boreal spring. To address the question of how the stratospheric air masses are transported into the PBL in more detail, we investigate case studies in this region with the mesoscale numerical weather prediction model COSMO. On this account, we initialize a passive tracer in the stratosphere using an elaborated 3D-labeling algorithm which applies the dynamical 2 pvu/380 K tropopause definition. This tracer is then advected by both resolved and parameterized processes and allows us to follow the stratospheric air masses along their journey into the mountainous PBL. Although this tracer does not directly represent a specific chemical species, its concentrations at the lowest model level can indicate when and where ozone levels at ground are likely to be influenced by the stratosphere. Concentration of a passive tracer (initialized in the stratosphere) at the lowest model level (10 m above ground) on May 3rd 00 UTC 2006. Around this time, increased levels of surface ozone (peaks up to 89 ppbv) were measured at Yellowstone National Park (YEL) in Wyoming. Contours indicate the geopotential at 500 hPa and show that the tracer is brought down from the stratosphere in the vicinity of a cyclone located to the northeast of YEL at this time.

Seismic structure and lithospheric rheology from deep crustal xenoliths, central Montana, USA

NASA Astrophysics Data System (ADS)

Mahan, K. H.; Schulte-Pelkum, V.; Blackburn, T. J.; Bowring, S. A.; Dudas, F. O.

2012-10-01

Improved resolution of lower crustal structure, composition, and physical properties enhances our understanding and ability to model tectonic processes. The cratonic core of Montana and Wyoming, USA, contains some of the most enigmatic lower crust known in North America, with a high seismic velocity layer contributing to as much as half of the crustal column. Petrological and physical property data for xenoliths in Eocene volcanic rocks from central Montana provide new insight into the nature of the lower crust in this region. Inherent heterogeneity in xenoliths derived from depths below ˜30 km support a composite origin for the deep layer. Possible intralayer velocity steps may complicate the seismic definition of the crust/mantle boundary and interpretations of crustal thickness, particularly when metasomatized upper mantle is considered. Mafic mineral-dominant crustal xenoliths and published descriptions of mica-bearing peridotite and pyroxenite xenoliths suggest a strong lower crust overlying a potentially weaker upper mantle.

The deep Earth may not be cooling down

NASA Astrophysics Data System (ADS)

Andrault, Denis; Monteux, Julien; Le Bars, Michael; Samuel, Henri

2016-06-01

The Earth is a thermal engine generating the fundamental processes of geomagnetic field, plate tectonics and volcanism. Large amounts of heat are permanently lost at the surface yielding the classic view of the deep Earth continuously cooling down. Contrary to this conventional depiction, we propose that the temperature profile in the deep Earth has remained almost constant for the last ∼4.3 billion years. The core-mantle boundary (CMB) has reached a temperature of ∼4400 K in probably less than 1 million years after the Moon-forming impact, regardless the initial core temperature. This temperature corresponds to an abrupt increase in mantle viscosity atop the CMB, when ∼60% of partial crystallization was achieved, accompanied with a major decrease in heat flow at the CMB. Then, the deep Earth underwent a very slow cooling until it reached ∼4100 K today. This temperature at, or just below, the mantle solidus is suggested by seismological evidence of ultra-low velocity zones in the D;-layer. Such a steady thermal state of the CMB temperature excludes thermal buoyancy from being the predominant mechanism to power the geodynamo over geological time. An alternative mechanism to sustain the geodynamo is mechanical forcing by tidal distortion and planetary precession. Motions in the outer core are generated by the conversion of gravitational and rotational energies of the Earth-Moon-Sun system. Mechanical forcing remains efficient to drive the geodynamo even for a sub-adiabatic temperature gradient in the outer core. Our thermal model of the deep Earth is compatible with an average CMB heat flow of 3.0 to 4.7 TW. Furthermore, the regime of core instabilities and/or secular changes in the astronomical forces could have supplied the lowermost mantle with a heat source of variable intensity through geological time. Episodic release of large amounts of heat could have remelted the lowermost mantle, thereby inducing the dramatic volcanic events that occurred during the Earth's history. In this scenario, because the Moon is a necessary ingredient to sustain the magnetic field, the habitability on Earth appears to require the existence of a large satellite.

Interactions between deep bedrock aquifers and surface water in function of recharge and topography: a numerical study

NASA Astrophysics Data System (ADS)

Goderniaux, P.; Davy, P.; Le Borgne, T.; Bresciani, E.; Jimenez-Martinez, J.

2011-12-01

In crystalline rock regions, such as Brittany (France), important reserves of groundwater into deep fractured aquifers are increasingly used and provide high quality water compared to shallow aquifers which can be subject to agricultural contamination. However, recharge processes of these deep aquifers and interactions with surface water are not yet fully understood. In some areas, intensive pumping is carried out without guarantee of the resource quantity and quality. Understanding these processes is crucial for sustainable management of the resource. In this study, we study how deep groundwater fluxes, pathways, ages, and river-aquifer interactions vary according to recharge. We assume that water flowing from the ground surface is distributed between shallow more permeable layers and deep layers. This repartition mostly depends on recharge rates. With high recharge, groundwater levels are high and subsurface streamlines are relatively short between recharge areas and existing draining rivers, which constitutes a very dense network. Therefore, most of the groundwater fluxes occur through the more permeable shallow layers. With low recharge, groundwater levels are lower, and river and shallow permeable levels are partly disconnected from each other. This induces a general increase of the groundwater streamlines length from the recharge areas to more sporadic discharge areas, and more fluxes occur through the deep layers. Recharge conditions and river-aquifer interactions have changed over the last thousands of years, due to change in precipitation, temperatures, existence of permafrost, etc. They have strongly influenced deep groundwater fluxes and can explain current groundwater age and flux distribution. To study these interactions, a regional-scale finite difference flow model was implemented. The model covers an area of 1400 km 2 , a depth of 1 km, and the topography is characteristic of Brittany. As rivers are mainly fed by groundwater drainage, seepages faces are used on the whole modelled area, so that the river network is not prescribed but dependent on simulated groundwater conditions. Different recharge conditions were tested (from 20 to 500 mm/yr). Results show that streamline lengths and groundwater ages have exponential distributions with characteristic lengths increasing with decreasing recharge. The total area of discharge zones decreases with recharge. Groundwater age is quite variable and increases with depth, but the variability is much more important in discharge areas than recharge areas. The proportion of groundwater discharge into the sea (compared to total recharge) increases when total recharge decreases. The model was also used to test the influence of heterogeneity or hydraulic conductivity contrast between shallow and deep layers on deep groundwater fluxes. In a completely homogeneous model, deep fluxes are correlated with recharge fluxes. Correlation decreases while contrast increases. If the permeability of the shallow weather zone is now 3 orders of magnitude larger than of deep aquifer, we observed that simulated deep groundwater fluxes increase locally, despite total recharge at the level of the ground surface decreases.

Polycyclic aromatic hydrocarbons (PAHs) in the water column and sediment core of Deep Bay, South China

NASA Astrophysics Data System (ADS)

Qiu, Yao-Wen; Zhang, Gan; Liu, Guo-Qing; Guo, Ling-Li; Li, Xiang-Dong; Wai, Onyx

2009-06-01

The levels of 15 polycyclic aromatic hydrocarbons (PAHs) were determined in seawater, suspended particulate matter (SPM), surface sediment and core sediment samples of Deep Bay, South China. The average concentrations Σ 15PAHs were 69.4 ± 24.7 ng l -1 in seawater, 429.1 ± 231.8 ng g -1 in SPM, and 353.8 ± 128.1 ng g -1 dry weight in surface sediment, respectively. Higher PAH concentrations were observed in SPM than in surface sediment. Temporal trend of PAH concentrations in core sediment generally increased from 1948 to 2004, with higher concentrations in top than in sub-surface, implying a stronger recent input of PAHs owing to the rapid economic development in Shenzhen. Compared with historical data, the PAH levels in surface sediment has increased, and this was further confirmed by the increasing trend of PAHs in the core sediment. Phenanthrene, fluoranthene and pyrene dominated in the PAH composition pattern profiles in the Bay. Compositional pattern analysis suggested that PAHs in the Deep Bay were derived from both pyrogenic and petrogenic sources, and diesel oil leakage, river runoff and air deposition may serve as important pathways for PAHs input to the Bay. Significant positive correlations between partition coefficient in surface sediment to that in water ( KOC) of PAH and their octanol/water partition coefficients ( KOW) were observed, suggesting that KOC of PAHs in sediment/water of Deep Bay may be predicted by the corresponding KOW.

Noninvasive Imaging of Retinal Morphology and Microvasculature in Obese Mice Using Optical Coherence Tomography and Optical Microangiography

PubMed Central

Zhi, Zhongwei; Chao, Jennifer R.; Wietecha, Tomasz; Hudkins, Kelly L.; Alpers, Charles E.; Wang, Ruikang K.

2014-01-01

Purpose. To evaluate early diabetes-induced changes in retinal thickness and microvasculature in a type 2 diabetic mouse model by using optical coherence tomography (OCT)/optical microangiography (OMAG). Methods. Twenty-two-week-old obese (OB) BTBR mice (n = 10) and wild-type (WT) control mice (n = 10) were imaged. Three-dimensional (3D) data volumes were captured with spectral domain OCT using an ultrahigh-sensitive OMAG scanning protocol for 3D volumetric angiography of the retina and dense A-scan protocol for measurement of the total retinal blood flow (RBF) rate. The thicknesses of the nerve fiber layer (NFL) and that of the NFL to the inner plexiform layer (IPL) were measured and compared between OB and WT mice. The linear capillary densities within intermediate and deep capillary layers were determined by the number of capillaries crossing a 500-μm line. The RBF rate was evaluated using an en face Doppler approach. These quantitative measurements were compared between OB and WT mice. Results. The retinal thickness of the NFL to IPL was significantly reduced in OB mice (P < 0.01) compared to that in WT mice, whereas the NFL thickness between the two was unchanged. 3D depth-resolved OMAG angiography revealed the first in vivo 3D model of mouse retinal microcirculation. Although no obvious differences in capillary vessel densities of the intermediate and deep capillary layers were detected between normal and OB mice, the total RBF rate was significantly lower (P < 0.05) in OB mice than in WT mice. Conclusions. We conclude that OB BTBR mice have significantly reduced NFL–IPL thicknesses and total RBF rates compared with those of WT mice, as imaged by OCT/OMAG. OMAG provides an unprecedented capability for high-resolution depth-resolved imaging of mouse retinal vessels and blood flow that may play a pivotal role in providing a noninvasive method for detecting early microvascular changes in patients with diabetic retinopathy. PMID:24458155

CT analysis of fat distribution superficial and deep to the Scarpa's fascial layer in the mid and lower abdomen.

PubMed

Harley, O J H; Pickford, M A

2013-04-01

Mismatches in the thickness of subcutaneous fat at the level of the umbilicus and suprapubic region can result in an unsightly bulge and an unfavourable result following standard abdominoplasty. This problem can be avoided by thinning the abdominoplasty flap. This study was carried out to assess the thickness of the subcutaneous fat layer at the level of the umbilicus and the supra-pubic region. Measurements of full thickness fat and the depth of Scarpa's fascia separating superficial and sub-Scarpa fat layers were taken from the CT scans in 69 women; mean age 52 years (range 30-79). The thickness of the skin and abdominal wall fat was an average of 7 mm thicker (max 22 mm; p < 0.05). The thickness of the fat layer superficial to Scarpa's fascia was an average of 19 mm at mid abdomen and 22 mm in the lower abdomen (p < 0.05). The thickness of the fat layer deep to Scarpa's fascia was 14 mm in the mid abdomen and 5 mm in the lower abdomen (p < 0.05). In 55% of patients the difference in thickness of the mid abdominal and lower abdominal fat was greater than 5 mm, a difference that could lead to a noticeable mismatch and therefore an unfavourable outcome. Results of this study suggest that selectively thinning the fat layer deep to Scarpa's fascia would address potential mismatches and preserve the Scarpa's fascia layer in more than 50% of cases, therefore allowing wounds to be closed with an effective deep tension layer. Copyright © 2012 British Association of Plastic, Reconstructive and Aesthetic Surgeons. Published by Elsevier Ltd. All rights reserved.

Radiometric Thermometry for Wearable Deep Tissue Monitoring

NASA Astrophysics Data System (ADS)

Momenroodaki, Parisa

Microwave thermometry is an attractive non-invasive method for measuring internal body temperature. This approach has the potential of enabling a wearable device that can continuously monitor core body temperature. There are a number of health-related applications in both diagnostics and therapy, which can benefit from the knowledge of core body temperature. However,there are a limited number of device solutions, which are usually not wearable or cannot continuously monitor internal body temperature non-invasively. In this thesis, a possible path toward implementing such a thermometer is presented. The device operates in the "quiet" frequency band of 1.4 GHz which is chosen as a compromise between sensing depth and radio frequency interference (RFI). A major challenge in microwave thermometry is detecting small temperature variations of deep tissue layers from surface (skin) measurements. The type and thickness of tissue materials significantly affect the design of the probe, which has the function of receiving black-body radiation from tissues beneath it and coupling the power to a sensitive radiometric receiver. High dielectric constant contrast between skin, fat (/bone), and muscle layers suggests structures with dominant tangential component of the electric field, such as a patch or slot. Adding a layer of low-loss,low-dielectric constant superstrate can further reduce the contribution of superficial tissue layers in the received thermal noise. Several probe types are designed using a full-wave electromagnetic simulator, with a goal of maximizing the power reception from deep tissue layers. The designs are validated with a second software tool and various measurements. A stable, narrow-band, and highly sensitive radiometer is developed, enabling the device to operate in a non-shielded RF environment.To use the microwave thermometer in a RF congested environment, not only narrow-band probe and radiometers are used but an additional probe is introduced for observing the environmental interference. By applying an adaptive filter, the effect of RFI is mitigated in long-term measurements. Several solid and liquid tissue phantoms, required for accurate modeling of the probe and human body interaction, are also developed. The concept of human body microwave thermometry is validated through several measurements on the single-layer and multiple-layer tissue phantoms as well as on the surface of the human body, specifically on the cheek where the internal temperature can easily be changed and independently measured with a thermocouple. Measurement results prove the capability of the device in tracking the temperature of buried tissue layer phantoms to within 0.2K, as well as monitoring internal human body temperature.

Initial Geochemistry Data of the Lake Ohrid (Macedonia, Albania) DEEP -Site Sediment Record: The ICDP Scopsco Drilling Project

NASA Astrophysics Data System (ADS)

Francke, A.; Wagner, B.; Sulpizio, R.; Zanchetta, G.; Leicher, N.; Gromig, R.; Krastel, S.; Lindhorst, K.; Wilke, T.

2014-12-01

Ancient lakes, with sediment records spanning >1 million years, are very rare. The UNESCO World Heritage site of Lake Ohrid on the Balkans is thought to be the oldest lake in Europe. With 212 endemic species described to date, it is also a hotspot of evolution. In order to unravel the geological and evolutionary history of the lake, an international group of scientists, conducted a deep drilling campaign in spring 2013 under the umbrella of the ICDP SCOPSCO project (Scientific Collaboration on Past Speciation Conditions in Lake Ohrid). Overall, about 2,100 m of sediments were recovered from four drill sites. At the main drill site (DEEP-site) in central parts of the lake where seismic data indicated a maximum sediment fill of ca. 700 m, a total of more than 1,500 m of sediments were recovered until a penetration depth of 569 m. Currently, core opening, core description, XRF and MSCL scanning, sub-sampling (16 cm resolution), and inorganic and organic geochemical as well as sedimentological analyses of the sediment cores from the DEEP site are in progress at the University of Cologne. Previous studies at Lake Ohrid have shown that interglacial periods are characterized by high TIC and TOC contents, likely associated with high contents of calcite and organic matter in the sediments. In contrast, during glacial periods negligible TIC and low TOC contents correspond to high K counts indicating enhanced supply of clastic material. Similar patterns can be observed in the biogeochemical analyses of the subsamples and in the XRF data of the DEEP site record. Following these variations on a glacial-interglacial time scale, TIC and TOC data obtained from the subsamples and from core catcher samples indicate that the DEEP site sequence provides a 1.2 million year old continuous record of environmental and climatological variability in the Balkan Region. The age control can be further improved by first findings of macroscopic tephra horizons. Peaks in K, Sr, Zr, and magnetic susceptibility might indicate the occurrence of additional cryptotephra layers in the sediment sequence.

Annually resolved Holocene record of dust deposition and size distribution from the South Pole

NASA Astrophysics Data System (ADS)

Chesler, A.; Koffman, B. G.; Kreutz, K. J.; Osterberg, E. C.; Winski, D.; Ferris, D. G.; Cole-Dai, J.; Wells, M. L.; Handley, M.

2017-12-01

Ice cores offer insights into past changes in atmospheric composition and circulation at high temporal resolution. Dust particles preserved in ice cores provide information regarding the atmospheric burden of dust and associated trace elements, changes in atmospheric circulation, and variations in the climates of dust-producing regions. Well resolved ice core dust records, therefore, can be used to gain a better understanding of the dynamics affecting ocean overturning circulation, to constrain atmospheric nutrient deposition to ocean ecosystems, and to assess atmospheric albedo variations. Existing Antarctic ice core dust records are generally either low-resolution and long-duration (glacial/interglacial timescale), or high-resolution and short-duration (past 2400 years), but high-resolution and long-duration records are rare. Here we present a continuous high-resolution record of dust deposition, including particle size distribution (PSD) and concentration, from the South Pole Ice (SPICE) Core, the first Holocene dust record from this location. The SPICE core was drilled during 2014-2016, reaching a depth of 1751 m. Cores were melted and analyzed for particles (1.0-12 µm diameter) using a continuous-flow Abakus laser particle sensor at Dartmouth College. The current SPICE Core chronology is based on: 1) visual stratigraphy from 0-10.2 ka and 2) correlations to the IceCube dust log calibration beyond 10.2 ka. Annual layer counts of Mg, dust (1.0 µm and 2.4 µm), Na, and SO4 demonstrate that the dust record is annually resolved through most of the Holocene ( 10.3 ka), allowing us to assess dust/climate relationships at high temporal resolution. We use meteorological and reanalysis data to understand modern drivers of observed variability in particle concentration and size distribution, and compare the new SPICE dust record to available Antarctic dust records including from EPICA Dome C, WAIS Divide, Taylor Dome, Taylor Glacier, Talos Dome, Siple Dome, and EPICA Dronning Maud Land. Interpretations of the SPICE dust record will be used to improve understanding of dust emissions, transport and deposition processes, and dust/climate relationships, through the Holocene.

Climate Sensitivity to Realistic Solar Heating of Snow and Ice

NASA Astrophysics Data System (ADS)

Flanner, M.; Zender, C. S.

2004-12-01

Snow and ice-covered surfaces are highly reflective and play an integral role in the planetary radiation budget. However, GCMs typically prescribe snow reflection and absorption based on minimal knowledge of snow physical characteristics. We performed climate sensitivity simulations with the NCAR CCSM including a new physically-based multi-layer snow radiative transfer model. The model predicts the effects of vertically resolved heating, absorbing aerosol, and snowpack transparency on snowpack evolution and climate. These processes significantly reduce the model's near-infrared albedo bias over deep snowpacks. While the current CCSM implementation prescribes all solar radiative absorption to occur in the top 2 cm of snow, we estimate that about 65% occurs beneath this level. Accounting for the vertical distribution of snowpack heating and more realistic reflectance significantly alters snowpack depth, surface albedo, and surface air temperature over Northern Hemisphere regions. Implications for the strength of the ice-albedo feedback will be discussed.

Composition and maturity of the 60013/14 core

NASA Technical Reports Server (NTRS)

Korotev, Randy L.; Morris, Richard V.; Lauer, Howard V., Jr.

1993-01-01

The 60013/14 double drive tube (62 cm deep) is one of three regolith cores taken 35-40 m apart in a triangular array on the Cayley plains at station 10' (LM/ALSEP), Apollo 16. This trio, which includes double drive tube 60009/10 (59 cm deep) and deep drill core 60001-7 (220 cm), is the only such array of cores returned from the Moon. The top 45 cm of 60013/14 is mature, as is surface reference soil 60601 taken nearby. Maturity generally decreases with depth, with soil below 45 cm being submature. The zone of lowest maturity (34 is less than or equal to I(sub s)/FeO is less than 50) extends from 46 to 58 cm depth, and corresponds to the distinct region of light-colored soil observed during core processing. In the other two cores, most of the compositional variation results from mixing between fine-grained, mature soil with 10-11 micro-g/g Sc and coarse-grained ferroan anorthosite consisting of greater than 99% plagioclase with less than 0.5 micro-g/g Sc. This is most evident in 60009/10 which contains a high abundance of plagioclase at about 54 cm depth (minimum Sc: 3-4 micro-g/g); a similar zone occurs in 60001-7 at 17-22 cm (MPU-C), although it is not as rich in plagioclase (minimum Sc: 6-7 micro-g/g). Compositional variations are less in 60013/14 than in the other two cores (range: 7.9-10.0 micro-g/g Sc), but are generally consistent with the 'plagioclase dilution' effect seen in 60009/10, i.e., most 60013/14 samples plot along the mixing line of 60009/10. However, a plagioclase component is not the cause of the lower maturity and lighter color of the unit at 46-58 cm depth in 60013/14. Many of the samples in this zone have distinctly lower Sm/Sc ratios than typical LM-area soils and plot off the mixing trend defined by 60009/10. This requires a component with moderately high Sc, but low-Sm/Sc, such as feldspathic fragmental breccia (FFB) or granulitic breccia. A component of Descartes regolith, such as occurs at North Ray Crater (NRC) and which is rich in FFB, could account for the composition of these soils (i.e., a 3:1 mixture of 60601 and NRC soil). It seems unlikely that NRC ejecta would occur half a meter deep at the LM station, thus this low-Sm/Sc component may result from an older, local crater that penetrated the Cayley surface layer and excavated underlying Descartes material, as did North Ray Crater. There is no evidence for such a unit or component in the other two cores. Soil below the light-colored unit (58-62) cm has 'typical' Sm/Sc ratios, but the lowest absolute Sc concentrations, i.e., it is compositionally equivalent to a mixture of surface soil and plagioclase such as that in ferroan anorthosite. This is the only soil that might be related to the plagioclase-rich units in the other two cores. Except for the mature soil at the top of each core and, perhaps, the plagioclase-rich layers, there is little compositional evidence for any common unit among the three cores. Soil corresponding to the mare-glass-bearing unit (MPU-B) and regolith-breccia-bearing unit (MPU-A) of 60001-7 do not occur in 60013/14 or 60009/10.

Relative age of Camelot crater and crater clusters near the Apollo 17 landing site

USGS Publications Warehouse

Lucchitta, B.K.

1979-01-01

Topographic profiles and depth-diameter ratios from the crater Camelot and craters of the central cluster in the Apollo 17 landing area suggest that these craters are of the same age. Therefore, layers that can be recognized in the deep-drill core and that can be identified as ejecta deposits from Camelot or from the cluster craters should yield similar emplacement ages. ?? 1979.

Prediction of Occult Invasive Disease in Ductal Carcinoma in Situ Using Deep Learning Features.

PubMed

Shi, Bibo; Grimm, Lars J; Mazurowski, Maciej A; Baker, Jay A; Marks, Jeffrey R; King, Lorraine M; Maley, Carlo C; Hwang, E Shelley; Lo, Joseph Y

2018-03-01

The aim of this study was to determine whether deep features extracted from digital mammograms using a pretrained deep convolutional neural network are prognostic of occult invasive disease for patients with ductal carcinoma in situ (DCIS) on core needle biopsy. In this retrospective study, digital mammographic magnification views were collected for 99 subjects with DCIS at biopsy, 25 of which were subsequently upstaged to invasive cancer. A deep convolutional neural network model that was pretrained on nonmedical images (eg, animals, plants, instruments) was used as the feature extractor. Through a statistical pooling strategy, deep features were extracted at different levels of convolutional layers from the lesion areas, without sacrificing the original resolution or distorting the underlying topology. A multivariate classifier was then trained to predict which tumors contain occult invasive disease. This was compared with the performance of traditional "handcrafted" computer vision (CV) features previously developed specifically to assess mammographic calcifications. The generalization performance was assessed using Monte Carlo cross-validation and receiver operating characteristic curve analysis. Deep features were able to distinguish DCIS with occult invasion from pure DCIS, with an area under the receiver operating characteristic curve of 0.70 (95% confidence interval, 0.68-0.73). This performance was comparable with the handcrafted CV features (area under the curve = 0.68; 95% confidence interval, 0.66-0.71) that were designed with prior domain knowledge. Despite being pretrained on only nonmedical images, the deep features extracted from digital mammograms demonstrated comparable performance with handcrafted CV features for the challenging task of predicting DCIS upstaging. Copyright © 2017 American College of Radiology. Published by Elsevier Inc. All rights reserved.

Age estimates for the late quaternary high sea-stands

NASA Astrophysics Data System (ADS)

Smart, Peter L.; Richards, David A.

A database of more than 300 published alpha-counted uranium-series ages has been compiled for coral reef terraces formed by Late Pleistocene high sea-stands. The database was screened to eliminate unreliable age estimates ( {230Th }/{232Th } < 20, calcite > 5%) and those without quoted without quoted errors, and a distributed error frequency curve was produced. This curve can be considered as a finite mixture model comprising k component normal distributions each with a weighting α. By using an expectation maximising algorithm, the mean and standard deviation of the component distributions, each corresponding to a high sea level event, were estimated. Eight high sea-stands with mean and standard deviations of 129.0 ± 33.0, 123.0 ± 13.0, 102.5 ± 2.0, 81.5 ± 5.0, 61.5 ± 6.0, 50.0 ± 1.0, 40.5 ± 5.0 and 33.0 ± 2.5 ka were resolved. The standard deviations are generally larger than the values quoted for individual age estimates. Whilst this may be due to diagenetic effects, especially for the older corals, it is argued that in many cases geological evidence clearly indicates that the high stands are multiple events, often not resolvable at sites with low rates of uplift. The uranium-series dated coral-reef terrace chronology shows good agreement with independent chronologies derived for Antarctic ice cores, although the resolution for the latter is better. Agreement with orbitally-tuned deep-sea core records is also good, but it is argued that Isotope Stage 5e is not a single event, as recorded in the cores, but a multiple event spanning some 12 ka. The much earlier age for Isotope Stage 5e given by Winograd et al. (1988) is not supported by the coral reef data, but further mass-spectrometric uranium-series dating is needed to permit better chronological resolution.

Reactive Fe(II) layers in deep-sea sediments

NASA Astrophysics Data System (ADS)

König, Iris; Haeckel, Matthias; Drodt, Matthias; Suess, Erwin; Trautwein, Alfred X.

1999-05-01

The percentage of the structural Fe(II) in clay minerals that is readily oxidized to Fe(III) upon contact with atmospheric oxygen was determined across the downcore tan-green color change in Peru Basin sediments. This latent fraction of reactive Fe(II) was only found in the green strata, where it proved to be large enough to constitute a deep reaction layer with respect to the pore water O 2 and NO 3-. Large variations were detected in the proportion of the reactive Fe(II) concentration to the organic matter content along core profiles. Hence, the commonly observed tan-green color change in marine sediments marks the top of a reactive Fe(II) layer, which may represent the major barrier to the movement of oxidation fronts in pelagic subsurface sediments. This is also demonstrated by numerical model simulations. The findings imply that geochemical barriers to pore water oxidation fronts form diagenetically in the sea floor wherever the stage of iron reduction is reached, provided that the sediments contain a significant amount of structural iron in clay minerals.

Model selection and Bayesian inference for high-resolution seabed reflection inversion.

PubMed

Dettmer, Jan; Dosso, Stan E; Holland, Charles W

2009-02-01

This paper applies Bayesian inference, including model selection and posterior parameter inference, to inversion of seabed reflection data to resolve sediment structure at a spatial scale below the pulse length of the acoustic source. A practical approach to model selection is used, employing the Bayesian information criterion to decide on the number of sediment layers needed to sufficiently fit the data while satisfying parsimony to avoid overparametrization. Posterior parameter inference is carried out using an efficient Metropolis-Hastings algorithm for high-dimensional models, and results are presented as marginal-probability depth distributions for sound velocity, density, and attenuation. The approach is applied to plane-wave reflection-coefficient inversion of single-bounce data collected on the Malta Plateau, Mediterranean Sea, which indicate complex fine structure close to the water-sediment interface. This fine structure is resolved in the geoacoustic inversion results in terms of four layers within the upper meter of sediments. The inversion results are in good agreement with parameter estimates from a gravity core taken at the experiment site.

Formation of an Anti-Core–Shell Structure in Layered Oxide Cathodes for Li-Ion Batteries

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Hanlei; Omenya, Fredrick; Whittingham, M. Stanley

The layered → rock-salt phase transformation in the layered dioxide cathodes for Li-ion batteries is believed to result in a “core-shell” structure of the primary particles, in which the core region maintains as the layered phase while the surface region undergoes the phase transformation to the rock-salt phase. Using transmission electron microscopy, here we demonstrate the formation of an “anti-core-shell” structure in cycled primary particles with a formula of LiNi0.80Co0.15Al0.05O2, in which the surface and subsurface regions remain as the layered structure while the rock-salt phase forms as domains in the bulk with a thin layer of the spinel phasemore » between the rock-salt core and the skin of the layered phase. Formation of this anti-core-shell structure is attributed to the oxygen loss at the surface that drives the migration of oxygen from the bulk to the surface, thereby resulting in localized areas of significantly reduced oxygen levels in the bulk of the particle, which subsequently undergoes the phase transformation to the rock-salt domains. The formation of the anti-core-shell rock-salt domains is responsible for the reduced capacity, discharge voltage and ionic conductivity in cycled cathode.« less

Efficacy of Cloud-Radiative Perturbations in Deep Open- and Closed-Cell Stratocumulus Clouds due to Aerosol Perturbations

NASA Astrophysics Data System (ADS)

Possner, A.; Wang, H.; Caldeira, K.; Wood, R.; Ackerman, T. P.

2017-12-01

Aerosol-cloud interactions (ACIs) in marine stratocumulus remain a significant source of uncertainty in constraining the cloud-radiative effect in a changing climate. Ship tracks are undoubted manifestations of ACIs embedded within stratocumulus cloud decks and have proven to be a useful framework to study the effect of aerosol perturbations on cloud morphology, macrophysical, microphyiscal and cloud-radiative properties. However, so far most observational (Christensen et al. 2012, Chen et al. 2015) and numerical studies (Wang et al. 2011, Possner et al. 2015, Berner et al. 2015) have concentrated on ship tracks in shallow boundary layers of depths between 300 - 800 m, while most stratocumulus decks form in significantly deeper boundary layers (Muhlbauer et al. 2014). In this study we investigate the efficacy of aerosol perturbations in deep open and closed cell stratocumulus. Multi-day idealised cloud-resolving simulations are performed for the RF06 flight of the VOCALS-Rex field campaign (Wood et al. 2011). During this flight pockets of deep open and closed cells were observed in a 1410 m deep boundary layer. The efficacy of aerosol perturbations of varied concentration and spatial gradients in altering the cloud micro- and macrophysical state and cloud-radiative effect is determined in both cloud regimes. Our simulations show that a continued point source emission flux of 1.16*1011 particles m-2 s-1 applied within a 300x300 m2 gridbox induces pronounced cloud cover changes in approximately a third of the simulated 80x80 km2 domain, a weakening of the diurnal cycle in the open-cell regime and a resulting increase in domain-mean cloud albedo of 0.2. Furthermore, we contrast the efficacy of equal strength near-surface or above-cloud aerosol perturbations in altering the cloud state.

Regolith irradiation stratigraphy at the Apollo 16 and 17 landing sites

NASA Technical Reports Server (NTRS)

Crozaz, G.

1978-01-01

Additional fossil track measurements in the Apollo 17 deep drill stem, as well as detailed track studies in section 3 of the Apollo 16 deep drill core are reported. Although the upper part of the Apollo 17 core seems to have accreted rapidly, no evidence for a rapid accretion of the lower part, as postulated by some authors, is found. Despite the apparent inhomogeneity of section 60003, its track record is unexpectedly homogeneous; all levels are heavily irradiated and emplacement of big slabs of material is not favored.

Dead Sea drawdown and monsoonal impacts in the Levant during the last interglacial

NASA Astrophysics Data System (ADS)

Torfstein, Adi; Goldstein, Steven L.; Kushnir, Yochanan; Enzel, Yehouda; Haug, Gerald; Stein, Mordechai

2015-02-01

Sediment cores recovered by the Dead Sea Deep Drilling Project (DSDDP) from the deepest basin of the hypersaline, terminal Dead Sea (lake floor at ∼725 m below mean sea level) reveal the detailed climate history of the lake's watershed during the last interglacial period (Marine Isotope Stage 5; MIS5). The results document both a more intense aridity during MIS5 than during the Holocene, and the moderating impacts derived from the intense MIS5e African Monsoon. Early MIS5e (∼133-128 ka) was dominated by hyperarid conditions in the Eastern Mediterranean-Levant, indicated by thick halite deposition triggered by a lake-level drop. Halite deposition was interrupted however, during the MIS5e peak (∼128-122 ka) by sequences of flood deposits, which are coeval with the timing of the intense precession-forced African monsoon that generated Mediterranean sapropel S5. A subsequent weakening of this humidity source triggered extreme aridity in the Dead Sea watershed and resulting in the biggest known lake level drawdown in its history, reflected by the deposition of thick salt layers, and a capping pebble layer corresponding to a hiatus at ∼116-110 ka. The DSDDP core provides the first evidence for a direct association of the African monsoon with mid subtropical latitude climate systems effecting the Dead Sea watershed. Combined with coeval deposition of Arabia and southern Negev speleothems, Arava travertines, and calcification of Red Sea corals, the evidence points to a climatically wet corridor that could have facilitated homo sapiens migration "out of Africa" during the MIS5e peak. The hyperaridity documented during MIS5e may provide an important analogue for future warming of arid regions of the Eastern Mediterranean-Levant.

Radar Detection of Layering in Ice: Experiments on a Constructed Layered Ice Sheet

NASA Astrophysics Data System (ADS)

Carter, L. M.; Koenig, L.; Courville, Z.; Ghent, R. R.; Koutnik, M. R.

2016-12-01

The polar caps and glaciers of both Earth and Mars display internal layering that preserves a record of past climate. These layers are apparent both in optical datasets (high resolution images, core samples) and in ground penetrating radar (GPR) data. On Mars, the SHARAD (Shallow Radar) radar on the Mars Reconnaissance Orbiter shows fine layering that changes spatially and with depth across the polar caps. This internal layering has been attributed to changes in fractional dust contamination due to obliquity-induced climate variations, but there are other processes that can lead to internal layers visible in radar data. In particular, terrestrial sounding of ice sheets compared with core samples have revealed that ice density and composition differences account for the majority of the radar reflectors. The large cold rooms and ice laboratory facility at the U.S. Army Cold Regions Research and Engineering Laboratory (CRREL) provide us a unique opportunity to construct experimental ice sheets in a controlled setting and measure them with radar. In a CRREL laboratory, we constructed a layered ice sheet that is 3-m deep with a various snow and ice layers with known dust concentrations (using JSC Mars-1 basaltic simulant) and density differences. These ice sheets were profiled using a commercial GPR, at frequencies of 200, 400 and 900 MHz, to determine how the radar profile changes due to systematic and known changes in snow and ice layers, including layers with sub-wavelength spacing. We will report results from these experiments and implications for interpreting radar-detected layering in ice on Earth and Mars.

Communication: Direct evidence for sequential dissociation of gas-phase Fe(CO)5 via a singlet pathway upon excitation at 266 nm

PubMed Central

Leitner, T.; Mazza, T.; Schröder, H.; Kunnus, K.; Schreck, S.; Radcliffe, P.; Düsterer, S.; Meyer, M.; Föhlisch, A.

2017-01-01

We prove the hitherto hypothesized sequential dissociation of Fe(CO)5 in the gas phase upon photoexcitation at 266 nm via a singlet pathway with time-resolved valence and core-level photoelectron spectroscopy with an x-ray free-electron laser. Valence photoelectron spectra are used to identify free CO molecules and to determine the time constants of stepwise dissociation to Fe(CO)4 within the temporal resolution of the experiment and further to Fe(CO)3 within 3 ps. Fe 3p core-level photoelectron spectra directly reflect the singlet spin state of the Fe center in Fe(CO)5, Fe(CO)4, and Fe(CO)3 showing that the dissociation exclusively occurs along a singlet pathway without triplet-state contribution. Our results are important for assessing intra- and intermolecular relaxation processes in the photodissociation dynamics of the prototypical Fe(CO)5 complex in the gas phase and in solution, and they establish time-resolved core-level photoelectron spectroscopy as a powerful tool for determining the multiplicity of transition metals in photochemical reactions of coordination complexes. PMID:28595420

Evidence from an Ice Core of a Large Impact Circa 1443 A.D.

NASA Astrophysics Data System (ADS)

Abbott, D.; Biscaye, P.; Cole-Dai, J.; Breger, D.

2005-12-01

Published data on melt water from the Siple Dome ice core show distinct anomalies at 1443.16 A.D. The Ca value is 111 ppb, over 9 times the next highest Ca value between 850-1760 A.D. The K value is 20 ppb, about 1.4 times the next highest K value. The Ca anomaly may be due to partial dissolution of CaCO3 microfossils from the 24 km Mahuika bolide impact crater on the southern New Zealand shelf. Deep-sea samples of the Mahuika ejecta layer contain >98% carbonate microfossils. The Mahuika impact may have produced tsunami runups of 130 meters in Jervis Bay, Australia. The Australian megatsunami deposits date to 1450±50 A.D. We analyzed the melt water from 8 ice-core samples from the West Antarctic Siple Dome ice core that date from 1440-1448 A.D. The 1443 A.D. level contained a peak in K of 53 ppb as compared to a background of ~6-7 ppb. Ca was high at 26 ppb but this is not as pronounced as reported earlier. We extracted solid material from the melt water. Except for the 1443 A.D. horizon and one fractured grain at the 1442 A.D. level, most samples were barren except for typical dust. At the 1443 A.D. level, we found 5 carbonate microfossils (coccoliths?) from 5 to 20 microns across. Two were round and solid. One microfossil appeared either caught during mitosis or broken during deformation and elongation. Another carbonate microfossil was unbroken, but appeared deformed into a square. We found a Cu grain with a small amount of oxygen. It is most likely a grain of native copper with an oxidized surface. Deformed microfossils and native minerals are both characteristic of bolide impacts. We also found many microcrystalline magnetite cubes, with an average crystal size of 0.3 microns or less. The high magnetic susceptibility of impact ejacta layers is caused by microcrystalline magnetite. We found a grain of conchoidally fractured feldspar ~15 microns long. A semi-quantitive EDAX analysis found 21% Si, 55% O, 9% Al, 5% Na, 3% K, 2% Fe, and 1% Ca (atomic %), well within the range of K-feldspar compositions. Because Fe does not fit into the feldspar structure, its occurrence implies either that the Fe-bearing feldspar is a glass, or that the Fe is in microcracks within the grain. As ice is not Fe-rich, the former is more likely. Because conchoidal fracture is characteristic of glass, this suggests that the feldspar is a glass (maskelynite) derived from an impact onto continental crust. We also found Al Fe oxide, Ti Al oxide, and amphibole. A semi-quantitative EDAX analysis of the latter found 53% O, 20% Si, 5% Na, 4% Al, Mg, and Fe, 3% Ca, and 0.5% K (atomic %) with trace Ti, S and Cl, close to the composition of the alkali amphibole richterite, which forms in contact metamorphosed limestones (skarns). The Al Fe oxide is most likely hercynite, a spinel that forms in contact metamorphic aureoles in silica-poor environments. All mineral grains had distinct edges. We also found radiating, fibrous crystals of a Ca Na silicate. An EDAX analysis of the mineral found 59% O, 13% Ca, 8% Si, 3% Na, and 1% Mg (atomic %). The Ca Na silicate is most likely pectolite (NaCa2Si3O8), which has radiating, fibrous crystals and forms in skarns. The presence of minerals characteristic of contact metamorphism is important as we have found abundant skarn facies minerals in the Mahuika ejecta layer within deep sea sediment. Thus, our data taken together are most consistent with an impact ejecta layer within the Siple Dome ice core that comes from the Mahuika impact event about 4044 kilometers away; providing a well-constrained date for the event around 1443 A.D.

[Soil organic carbon mineralization of Black Locust forest in the deep soil layer of the hilly region of the Loess Plateau, China].

PubMed

Ma, Xin-Xin; Xu, Ming-Xiang; Yang, Kai

2012-11-01

The deep soil layer (below 100 cm) stores considerable soil organic carbon (SOC). We can reveal its stability and provide the basis for certification of the deep soil carbon sinks by studying the SOC mineralization in the deep soil layer. With the shallow soil layer (0-100 cm) as control, the SOC mineralization under the condition (temperature 15 degrees C, the soil water content 8%) of Black Locust forest in the deep soil layer (100-400 cm) of the hilly region of the Loess Plateau was studied. The results showed that: (1) There was a downward trend in the total SOC mineralization with the increase of soil depth. The total SOC mineralization in the sub-deep soil (100-200 cm) and deep soil (200-400 cm) were equivalent to approximately 88.1% and 67.8% of that in the shallow layer (0-100 cm). (2) Throughout the carbon mineralization process, the same as the shallow soil, the sub-deep and deep soil can be divided into 3 stages. In the rapid decomposition phase, the ratio of the mineralization or organic carbon to the total mineralization in the sub-deep and deep layer (0-10 d) was approximately 50% of that in the shallow layer (0-17 d). In the slow decomposition phase, the ratio of organic carbon mineralization to total mineralization in the sub-deep, deep layer (11-45 d) was 150% of that in the shallow layer (18-45 d). There was no significant difference in this ratio among these three layers (46-62 d) in the relatively stable stage. (3) There was no significant difference (P > 0.05) in the mineralization rate of SOC among the shallow, sub-deep, deep layers. The stability of SOC in the deep soil layer (100-400 cm) was similar to that in the shallow soil layer and the SOC in the deep soil layer was also involved in the global carbon cycle. The change of SOC in the deep soil layer should be taken into account when estimating the effects of soil carbon sequestration in the Hilly Region of the Loess Plateau, China.

ELSA flood stack for MIS 2-3 from dry maar lakestructure Auel (Eifel/Germany)

NASA Astrophysics Data System (ADS)

Brunck, Heiko; Sirocko, Frank

2015-04-01

Lacustrine sediments are very sensitive to natural and anthropogenically enviromental changes. Thus, lake sediments are excellent climate archives and can be used for reconstructions of past precipitation and flood events. However, until now, there is no continous flood record for the entire last 60 000 years for Central Europe. The present study reconstructs paleo floods from event layers in the sediment, of dry maar lakestructure Auel (Eifel). This silted up basin has an inflow by a local stream. Accordingly the sedimentation rate is directly linked to runoff activity. The bioturbation was low so that event layers become visible, but varves are not preserved. The maar site is near to the town of Gerolstein in the Eifel; the core AU2 was drilled in the ELSA (Eifel Laminated Sediment archive) project and is 123m long. AU2 has the highest sedimentation rate of all ELSA cores, due to abundant fluvial input. The Eifel area is well suited to approximate Central European weather, because modern water level gauge data from Eifel rivers correlate with respective data from the Rhine (Wernli and Pfahl, 2009). Due to the high inflow into the maar, Auel has the highest number of botanical macro remains of all ELSA cores. These specific conditions explain why only in AU2 all 21 Greenland interstadials can be observed in the abundance of wood remains and the organic carbon concentration. In a final stratigraphic step the time series of Corg was tuned to the Greenland ice core chronology to link the central European landscape evolution directly to the Greenland climate curve (Svensson et al., 2008). Combined sedimentological, paleobotanical and geochemical data received from AU2 builds the foundation of the 14C based chronology. The synchronisation of the record with other cores is controlled by tephra time markers and pollen. Both are used to align the main cores of the ELSA project and construct an integrated age model for the last 220 000 years [b2k] (Förster and Sirocko, 2014). To study the past flood events in detail, 10 cm long thin sections were analyzed to distinguish flood layers from distal turbidites. Turbidites have a continuous grain size gradation; the grains size profile of flood events is in contrast characterized by several grain size maxima over the entire layer thickness. A flood event over several days shows numerous peaks of intense discharge, which lead to a discontinuous grain size gradient. The thickness of each flood layer was measured for the classification of the event intensity. As a consequence, 88 flood layers over 7.5 mm thickness were detected. Our time-series represents the first highly-resolved chronology for flood events from 60 000 years until present times and indicates variable periodicities of flood activity linked to predominant climatic development. The fore main sections of all flood layers are: 44 000 - 45 500, 30 000 - 37 000, 20 000 - 22 500 and 11 000 - 17 000 years [b2k].

A 1500-year holocene caribbean climate archive from the Blue Hole, lighthouse reef, belize

USGS Publications Warehouse

Gischler, E.; Shinn, E.A.; Oschmann, W.; Fiebig, J.; Buster, N.A.

2008-01-01

Sediment cores (up to 6 m in length) from the bottom of the Blue Hole, a 125 m deep Pleistocene sinkhole located in the lagoon of Lighthouse Reef Atoll, Belize, consist of undisturbed, annually layered biogenic carbonate muds and silts with intercalated coarser grained storm beds. The sedimentation rate of the layered sections is 2.5 mm/y on average, and the long cores span the past 1500 years. Oxygen isotopes of laminated sediment provide a late Holocene climate proxy: A high-resolution ??18O time series traces the final Migration Period Pessimum, the Medieval Warm Period, the Little Ice Age, and the subsequent temperature rise. Carbon isotopes (??13C) decrease up core and show the impacts of the decline of the Mayan culture and the Suess effect. Time series analyses of ??18O and ??13C content reveal 88-, 60-, 52-, and 32-year cyclicities, and suggest solar forcing. Storm event beds are most common during AD 650-850, around AD 1000, during AD 1200-1300, and AD 1450-1550. Major storm beds are rare during the past 500 years BP.

Study of recombination characteristics in MOCVD grown GaN epi-layers on Si

NASA Astrophysics Data System (ADS)

Gaubas, E.; Ceponis, T.; Dobrovolskas, D.; Malinauskas, T.; Meskauskaite, D.; Miasojedovas, S.; Mickevicius, J.; Pavlov, J.; Rumbauskas, V.; Simoen, E.; Zhao, M.

2017-12-01

The radiative and non-radiative recombination carrier decay lifetimes in GaN epi-layers grown by metal-organic chemical vapour deposition technology on Si substrates were measured by contactless techniques of time-resolved photoluminescence and microwave-probed transients of photoconductivity. The lifetime variations were obtained to be dependent on growth regimes. These variations have been related to varied densities of edge dislocations associated with growth temperature. It has been also revealed that the lateral carrier lifetime and photoluminescence intensity distribution is determined by the formation of dislocation clusters dependent on the growth conditions. For low excitation level, the asymptotic component within the excess carrier decay transients is attributed to carrier trapping and anomalous diffusion through random-walk processes within dislocation cluster regions and barriers at dislocation cores. The two-componential decay process at high excitation conditions, where excess carriers may suppress barriers, proceeds through a nonlinear recombination, where band-to-band transitions determine the nonlinearity of the process, while the asymptotic component is ascribed to the impact of D-A pair PL within the long-wavelength wing of the UV-PL band.

Aligning MIS5 proxy records from Lake Ohrid (FYROM) with independently dated Mediterranean archives: implications for core chronology

NASA Astrophysics Data System (ADS)

Zanchetta, G.; Regattieri, E.; Giaccio, B.; Wagner, B.; Sulpizio, R.; Francke, A.; Vogel, L. H.; Sadori, L.; Masi, A.; Sinopoli, G.; Lacey, J. H.; Leng, M. L.; Leicher, N.

2015-10-01

The DEEP site sediment sequence obtained during the ICDP SCOPSCO project at Lake Ohrid was dated using tephrostratigraphic information, cyclostratigraphy, and orbital tuning through marine isotope record. Although this approach is suitable for the generation of a general chronological framework of the long succession, it is insufficient to resolve more detailed paleoclimatological questions, such as leads and lags of climate events between marine and terrestrial records or between different regions. In this paper, we demonstrate how the use of different tie points can affect cyclostratigraphy and orbital tuning for the period between ca. 140 and 70 ka and how the results can be correlated with directly/indirectly radiometrically-dated Mediterranean marine and continental proxy records. The alternative age model obtained shows consistent differences with that proposed by Francke et al. (2015) for the same interval, in particular at the level of the MIS6-5e transition. According to this age model, different proxies from the DEEP site sediment record support an increase of temperatures between glacial to interglacial conditions, which is almost synchronous with a rapid increase in sea surface temperature observed in the western Mediterranean. The results show how important a detailed study of independent chronological tie points is for synchronizing different records and to highlight asynchronisms of climate events.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fischer, C G; Denison, A B; Weber, M H

We employed the two detector coincident Doppler Broadening Technique (coPAS) to investigate Ag, Au and Ag/Au alloy quantum dots of varying sizes which were deposited in thin layers on glass slides. The Ag quantum dots range from 2 to 3 nm in diameter, while the Ag/Au alloy quantum dots exhibit Ag cores of 2 nm and 3 nm and Au shells of varying thickness. We investigate the possibility of positron confinement in the Ag core due to positron affinity differences between Ag and Au. We describe the results and their significance to resolving the issue of whether positrons annihilate withinmore » the quantum dot itself or whether surface and positron escape effects play an important role.« less

Comparison of Large eddy dynamo simulation using dynamic sub-grid scale (SGS) model with a fully resolved direct simulation in a rotating spherical shell

NASA Astrophysics Data System (ADS)

Matsui, H.; Buffett, B. A.

2017-12-01

The flow in the Earth's outer core is expected to have vast length scale from the geometry of the outer core to the thickness of the boundary layer. Because of the limitation of the spatial resolution in the numerical simulations, sub-grid scale (SGS) modeling is required to model the effects of the unresolved field on the large-scale fields. We model the effects of sub-grid scale flow and magnetic field using a dynamic scale similarity model. Four terms are introduced for the momentum flux, heat flux, Lorentz force and magnetic induction. The model was previously used in the convection-driven dynamo in a rotating plane layer and spherical shell using the Finite Element Methods. In the present study, we perform large eddy simulations (LES) using the dynamic scale similarity model. The scale similarity model is implement in Calypso, which is a numerical dynamo model using spherical harmonics expansion. To obtain the SGS terms, the spatial filtering in the horizontal directions is done by taking the convolution of a Gaussian filter expressed in terms of a spherical harmonic expansion, following Jekeli (1981). A Gaussian field is also applied in the radial direction. To verify the present model, we perform a fully resolved direct numerical simulation (DNS) with the truncation of the spherical harmonics L = 255 as a reference. And, we perform unresolved DNS and LES with SGS model on coarser resolution (L= 127, 84, and 63) using the same control parameter as the resolved DNS. We will discuss the verification results by comparison among these simulations and role of small scale fields to large scale fields through the role of the SGS terms in LES.

A 400-kyr record of millennial-scale carbonate preservation events in the Southern Ocean: Implications for Atlantic Meridional Overturning Circulation and atmospheric CO2

NASA Astrophysics Data System (ADS)

Hodell, D. A.; Vautravers, M. J.; Barker, S.; Charles, C.; Crowhurst, S.

2014-12-01

Hodell et al. (2001) suggested that carbonate preservation in the deep Cape Basin represented a qualitative, high-resolution record of the temporal evolution of the carbonate saturation state of the deep sea. The carbonate signal reflects both transient events in the redistribution of alkalinity and DIC in the deep ocean and steady-state mass balance processes. Here we re-analyzed the carbonate records of Sites 1089/TN057-21 using an Avaatech XRF core scanner and measured elemental variations at 2.5-mm resolution for the past 400 kyrs. Log Ca/Ti is highly correlated to weight percent carbonate content and other dissolution proxies and resolves millennial-scale events in carbonate preservation. A high-pass filter removes the low-frequency (orbital) variability in carbonate preservation, which is attributed mainly to steady-state mass balance processes. The high-frequency (suborbital) component reflects transient responses to the redistribution of carbonate ion that is related mainly to changing deep-water circulation. During the last glacial period, distinct millennial-scale increases in carbonate preservation in piston core TN057-21 occurred during times of enhanced Atlantic Meridional Overtunring Circulation (AMOC) (Barker et al., 2010; Barker and Diz, 2014), as supported by increases in benthic δ13C and less radiogenic ɛNd values. Carbonate preservation peaked particularly during long, warm interstadials in Greenland when a deep water mass with high carbonate ion concentration was formed in the North Atlantic. Export of NADW may have been greater than the Holocene during some of these events ("overshoots") and/or preformed carbonate ion concentrations in North Atlantic source areas may have been higher owing to lower atmospheric CO2 and less carbonate production in surface water. Each South Atlantic carbonate peak is associated with the start of Antarctic cooling and declining or leveling of atmospheric CO2, reflecting the signature of a thermal bipolar seesaw. The increased flux of carbonate ion to the Southern Ocean during strong interstadials may have played a role in titrating respiratory CO2, thereby slowing CO2 degassing to the atmosphere and providing a secondary mechanism, in addition to heat transport, for interhemispheric coupling on millennial time scales.

Using a bias aware EnKF to account for unresolved structure in an unsaturated zone model

NASA Astrophysics Data System (ADS)

Erdal, D.; Neuweiler, I.; Wollschläger, U.

2014-01-01

When predicting flow in the unsaturated zone, any method for modeling the flow will have to define how, and to what level, the subsurface structure is resolved. In this paper, we use the Ensemble Kalman Filter to assimilate local soil water content observations from both a synthetic layered lysimeter and a real field experiment in layered soil in an unsaturated water flow model. We investigate the use of colored noise bias corrections to account for unresolved subsurface layering in a homogeneous model and compare this approach with a fully resolved model. In both models, we use a simplified model parameterization in the Ensemble Kalman Filter. The results show that the use of bias corrections can increase the predictive capability of a simplified homogeneous flow model if the bias corrections are applied to the model states. If correct knowledge of the layering structure is available, the fully resolved model performs best. However, if no, or erroneous, layering is used in the model, the use of a homogeneous model with bias corrections can be the better choice for modeling the behavior of the system.

Core-shell solar cell fabrication using heterostructure of ZnO-nanowires arrays decorated with sputtered CdTe-nanoparticles

NASA Astrophysics Data System (ADS)

Akbarnejad, Elaheh; Dehghan Nayeri, Fatemeh; Ghoranneviss, Mahmood

2018-03-01

Core-shell heterostructures of ZnO-NWs/CdTe-NPs were fabricated through covering ZnO-NWs arrays using CdTe-NPs and the room temperature RF magnetron sputtering method. The influence of different CdTe-NPs deposition time (5, 20, 40 and 60 min) on the physical properties of core-shell heterostructures were investigated. In order to achieve the highest coverage level and a wide range of optical absorption at a visible range for a ZnO-NWs/CdTe-NPs (60 min) array, FTO/ZnO-NWs/CdTe-NPs (60 min)/Ni/Au core-shell solar cells were used. Solar cell fabrication was performed by soaking the samples in a saturated CdCl2 solution in methanol and a post-annealing treatment at 400 °C for 1 h in air which led to grain growth, the passivation of deep level defects, and the decrease of stacking faults. Short-circuit current and power conversion efficiency of the fabricated cell under illumination with visible light AM1.5 (100 mW cm-2) were 13.3 mA cm-2 and 3.41%, respectively. It was found that introducing a thin interfacial layer of CdSe to the configuration (FTO/ZnO-NWs/CdSe (10 nm)/CdTe-NPs (60 min)/Ni/Au) led to a 5.58% enhancement of photovoltaic performance of the solar cell (20.9 mA cm-2), which is 63.6% more than that of the same configuration without CdSe.

Mixing Layer Formation near the Tropopause Due to Gravity Wave Critical Level Interactions in a Cloud-Resolving Model.

NASA Astrophysics Data System (ADS)

Moustaoui, Mohamed; Joseph, Binson; Teitelbaum, Hector

2004-12-01

A plausible mechanism for the formation of mixing layers in the lower stratosphere above regions of tropical convection is demonstrated numerically using high-resolution, two-dimensional (2D), anelastic, nonlinear, cloud-resolving simulations. One noteworthy point is that the mixing layer simulated in this study is free of anvil clouds and well above the cloud anvil top located in the upper troposphere. Hence, the present mechanism is complementary to the well-known process by which overshooting cloud turrets causes mixing within stratospheric anvil clouds. The paper is organized as a case study verifying the proposed mechanism using atmospheric soundings obtained during the Central Equatorial Pacific Experiment (CEPEX), when several such mixing layers, devoid of anvil clouds, had been observed. The basic dynamical ingredient of the present mechanism is (quasi stationary) gravity wave critical level interactions, occurring in association with a reversal of stratospheric westerlies to easterlies below the tropopause region. The robustness of the results is shown through simulations at different resolutions. The insensitivity of the qualitative results to the details of the subgrid scheme is also evinced through further simulations with and without subgrid mixing terms. From Lagrangian reconstruction of (passive) ozone fields, it is shown that the mixing layer is formed kinematically through advection by the resolved-scale (nonlinear) velocity field.

Time-dependent many-body treatment of electron-boson dynamics: Application to plasmon-accompanied photoemission

NASA Astrophysics Data System (ADS)

Schüler, M.; Berakdar, J.; Pavlyukh, Y.

2016-02-01

Recent experiments access the time-resolved photoelectron signal originating from plasmon satellites in correlated materials and address their buildup and decay in real time. Motivated by these developments, we present the Kadanoff-Baym formalism for the nonequilibrium time evolution of interacting fermions and bosons. In contrast to the fermionic case, the bosons are described by second-order differential equations. Solution of the bosonic Kadanoff-Baym equations—which is the central ingredient of this work—requires substantial modification of the usual two-times electronic propagation scheme. The solution is quite general and can be applied to a number of problems, such as the interaction of electrons with quantized photons, phonons, and other bosonic excitations. Here the formalism is applied to the photoemission from a deep core hole accompanied by plasmon excitation. We compute the time-resolved photoelectron spectra and discuss the effects of intrinsic and extrinsic electron energy losses and their interference.

Ozone Transport Aloft Drives Surface Ozone Maxima Across the Mojave Desert

NASA Astrophysics Data System (ADS)

VanCuren, R. A.

2014-12-01

A persistent layer of polluted air in the lower free troposphere over the Mojave Desert (California and Nevada) drives spring and summer surface ozone maxima as deep afternoon mixing delivers ozone and ozone precursors to surface measurement sites 200 km or more downwind of the mountains that separate the deserts from the heavily populated coastal areas of California. Pollutants in this elevated layer derive from California source regions (the Los Angeles megacity region and the intensive agricultural region of the San Joaquin Valley), and from long-range transport from Asia. Recognition of this poorly studied persistent layer explains and expands the significance of previously published reports of ozone and other pollutants observed in and over the Mojave Desert, resolves an apparent paradox in the timing of ozone peaks due to transport from the upwind basins, and provides a new perspective on the long-range downwind impacts of megacity pollution plumes.

Defect-induced mix experiment for NIF

NASA Astrophysics Data System (ADS)

Schmitt, M. J.; Bradley, P. A.; Cobble, J. A.; Hsu, S. C.; Krasheninnikova, N. S.; Kyrala, G. A.; Magelssen, G. R.; Murphy, T. J.; Obrey, K. A.; Tregillis, I. L.; Wysocki, F. J.; Finnegan, S. M.

2013-11-01

The Defect Induced Mix Experiment (DIME-II) will measure the implosion and mix characteristics of CH capsules filled with 5 atmospheres of DT by incorporating mid-Z dopant layers of Ge and Ga. This polar direct drive (PDD) experiment also will demonstrate the filling of a CH capsule at target chamber center using a fill tube. Diagnostics for these experiments include areal x-ray backlighting to obtain early time images of the implosion trajectory and a multiple-monochromatic imager (MMI) to collect spectrally-resolved images of the capsule dopant line emission near bangtime. The inclusion of two (or more) thin dopant layers at separate depths within the capsule shell facilitates spatial correlation of mix between the layers and the hot gas core on a single shot. The dopant layers are typically 2 μm thick and contain dopant concentrations of 1.5%. Three dimensional Hydra simulations have been performed to assess the effects of PDD asymmetry on capsule performance.

Stratigraphy and depositional history of the Apollo 17 drill core

NASA Technical Reports Server (NTRS)

Taylor, G. J.; Warner, R. D.; Keil, K.

1979-01-01

Lithologic abundances obtained from modal analyses of a continuous string of polished thin sections indicate that the Apollo 17 deep drill core can be divided into three main zones: An upper zone (0-19 cm depth) characterized by high abundances of agglutinates (30%) and a high ratio of mare to non-mare lithic fragments (less than 0.8); a coarse-grained layer (24-56 cm) rich in fragments of high-Ti mare basalts and mineral fragments derived from them, and poor in agglutinates (6%); and a lower zone (56-285 cm) characterized by variable but generally high agglutinate abundances (25%) and a low ratio of mare to nonmare lithic fragments (0.6). Using observations of the geology of the landing site, the principles of cratering dynamics, and the vast amount of data collected on the core, the following depositional history for the section of regolith sampled by the Apollo 17 drill core: was devised.

Assessing the utility of transcriptome data for inferring phylogenetic relationships among coleoid cephalopods.

PubMed

Lindgren, Annie R; Anderson, Frank E

2018-01-01

Historically, deep-level relationships within the molluscan class Cephalopoda (squids, cuttlefishes, octopods and their relatives) have remained elusive due in part to the considerable morphological diversity of extant taxa, a limited fossil record for species that lack a calcareous shell and difficulties in sampling open ocean taxa. Many conflicts identified by morphologists in the early 1900s remain unresolved today in spite of advances in morphological, molecular and analytical methods. In this study we assess the utility of transcriptome data for resolving cephalopod phylogeny, with special focus on the orders of Decapodiformes (open-eye squids, bobtail squids, cuttlefishes and relatives). To do so, we took new and previously published transcriptome data and used a unique cephalopod core ortholog set to generate a dataset that was subjected to an array of filtering and analytical methods to assess the impacts of: taxon sampling, ortholog number, compositional and rate heterogeneity and incongruence across loci. Analyses indicated that datasets that maximized taxonomic coverage but included fewer orthologs were less stable than datasets that sacrificed taxon sampling to increase the number of orthologs. Clades recovered irrespective of dataset, filtering or analytical method included Octopodiformes (Vampyroteuthis infernalis + octopods), Decapodiformes (squids, cuttlefishes and their relatives), and orders Oegopsida (open-eyed squids) and Myopsida (e.g., loliginid squids). Ordinal-level relationships within Decapodiformes were the most susceptible to dataset perturbation, further emphasizing the challenges associated with uncovering relationships at deep nodes in the cephalopod tree of life. Copyright © 2017 Elsevier Inc. All rights reserved.

Widespread Miocene deep-sea hiatuses: coincidence with periods of global cooling.

USGS Publications Warehouse

Barron, J.A.; Keller, G.

1982-01-01

High-resolution biostratigraphic analyses of Miocene deep-sea cores reveal eight intervals of widespread hiatuses in the world ocean. In complete sections these hiatuses correspond to intervals of cool faunal and floral assemblages, rapid enrichment of delta 18O, and sea-level regressions. These factors suggest that Miocene deep-sea hiatuses result from an increased intensity of circulation and corrosiveness of bottom currents during periods of increased polar refrigeration.-Authors

Characterization of deep level defects and thermally stimulated depolarization phenomena in La-doped TlInS{sub 2} layered semiconductor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Seyidov, MirHasan Yu., E-mail: smirhasan@gyte.edu.tr; Suleymanov, Rauf A.; Mikailzade, Faik A.

2015-06-14

Lanthanum-doped high quality TlInS{sub 2} (TlInS{sub 2}:La) ferroelectric-semiconductor was characterized by photo-induced current transient spectroscopy (PICTS). Different impurity centers are resolved and identified. Analyses of the experimental data were performed in order to determine the characteristic parameters of the extrinsic and intrinsic defects. The energies and capturing cross section of deep traps were obtained by using the heating rate method. The observed changes in the Thermally Stimulated Depolarization Currents (TSDC) near the phase transition points in TlInS{sub 2}:La ferroelectric-semiconductor are interpreted as a result of self-polarization of the crystal due to the internal electric field caused by charged defects. Themore » TSDC spectra show the depolarization peaks, which are attributed to defects of dipolar origin. These peaks provide important information on the defect structure and localized energy states in TlInS{sub 2}:La. Thermal treatments of TlInS{sub 2}:La under an external electric field, which was applied at different temperatures, allowed us to identify a peak in TSDC which was originated from La-dopant. It was established that deep energy level trap BTE43, which are active at low temperature (T ≤ 156 K) and have activation energy 0.29 eV and the capture cross section 2.2 × 10{sup −14} cm{sup 2}, corresponds to the La dopant. According to the PICTS results, the deep level trap center B5 is activated in the temperature region of incommensurate (IC) phases of TlInS{sub 2}:La, having the giant static dielectric constant due to the structural disorders. From the PICTS simulation results for B5, native deep level trap having an activation energy of 0.3 eV and the capture cross section of 1.8 × 10{sup −16} cm{sup 2} were established. A substantial amount of residual space charges is trapped by the deep level localized energy states of B5 in IC-phase. While the external electric field is applied, permanent dipoles, which are originated from the charged B5 deep level defects, are aligned in the direction of the applied electric field and the equilibrium polarization can be reached in a relatively short time. When the polarization field is maintained, while cooling the temperature of sample to a sufficiently low degrees, the relaxation times of the aligned dipoles drastically increases. Practically, frozen internal electric field or electrets states remain inside the TlInS{sub 2}:La when the applied bias field is switched off. The influence of deep level defects on TSDC spectra of TlInS{sub 2}:La has been revealed for the first time.« less

Deep levels in as-grown and Si-implanted In(0.2)Ga(0.8)As-GaAs strained-layer superlattice optical guiding structures

NASA Technical Reports Server (NTRS)

Dhar, S.; Das, U.; Bhattacharya, P. K.

1986-01-01

Trap levels in about 2-micron In(0.2)Ga(0.8)As(94 A)/GaAs(25 A) strained-layer superlattices, suitable for optical waveguides, have been identified and characterized by deep-level transient spectroscopy and optical deep-level transient spectroscopy measurements. Several dominant electron and hole traps with concentrations of approximately 10 to the 14th/cu cm, and thermal ionization energies Delta-E(T) varying from 0.20 to 0.75 eV have been detected. Except for a 0.20-eV electron trap, which might be present in the In(0.2)Ga(0.8)As well regions, all the other traps have characteristics similar to those identified in molecular-beam epitaxial GaAs. Of these, a 0.42-eV hole trap is believed to originate from Cu impurities, and the others are probably related to native defects. Upon Si implantation and halogen lamp annealing, new deep centers are created. These are electron traps with Delta-E(T) = 0.81 eV and hole traps with Delta-E(T) = 0.46 eV. Traps occurring at room temperature may present limitations for optical devices.

deepNF: Deep network fusion for protein function prediction.

PubMed

Gligorijevic, Vladimir; Barot, Meet; Bonneau, Richard

2018-06-01

The prevalence of high-throughput experimental methods has resulted in an abundance of large-scale molecular and functional interaction networks. The connectivity of these networks provides a rich source of information for inferring functional annotations for genes and proteins. An important challenge has been to develop methods for combining these heterogeneous networks to extract useful protein feature representations for function prediction. Most of the existing approaches for network integration use shallow models that encounter difficulty in capturing complex and highly-nonlinear network structures. Thus, we propose deepNF, a network fusion method based on Multimodal Deep Autoencoders to extract high-level features of proteins from multiple heterogeneous interaction networks. We apply this method to combine STRING networks to construct a common low-dimensional representation containing high-level protein features. We use separate layers for different network types in the early stages of the multimodal autoencoder, later connecting all the layers into a single bottleneck layer from which we extract features to predict protein function. We compare the cross-validation and temporal holdout predictive performance of our method with state-of-the-art methods, including the recently proposed method Mashup. Our results show that our method outperforms previous methods for both human and yeast STRING networks. We also show substantial improvement in the performance of our method in predicting GO terms of varying type and specificity. deepNF is freely available at: https://github.com/VGligorijevic/deepNF. vgligorijevic@flatironinstitute.org, rb133@nyu.edu. Supplementary data are available at Bioinformatics online.

Electrical Investigation of Metal-Olivine Systems and Application to the Deep Interior of Mercury

NASA Astrophysics Data System (ADS)

Zhang, Z.; Pommier, A.

2017-12-01

Transfers of mass, heat, and electric currents between a silicate mantle and an underlying metallic core characterize the Core-Mantle Boundary (CMB) region of terrestrial planets. In particular, constraining the structure and chemistry of the CMB region of Mercury is crucial to understand its thermal state and unique magnetic activity. To probe the physical and chemical processes of the Hermean CMB, we conducted an electrical study of metal-olivine systems at pressure, temperature, and chemistry conditions relevant to the mantle and CMB region of Mercury. Electrical measurements were performed at 5-7 GPa and up to 1675ºC during heating and cooling in the multi-anvil apparatus using impedance spectroscopy. Samples are made of one metal layer (Fe, FeS, FeSi2, or Fe-Ni-S-Si systems) and one polycrystalline olivine (Fo90) layer, with the metal:olivine ratio ranging from 1:0.7 to 1:9.2. For all samples, we observe that bulk electrical conductivity increases with temperature from 10-2.5 to 101.8 S/m, which is higher than the conductivity of polycrystalline olivine but lower than the one of the metal phase at similar conditions. In some experiments, a conductivity jump is observed at a temperature corresponding to the melting temperature of the metal phase. This conductivity increase cannot be explained by the electrical properties of liquid metal as metal is less conductive with increasing temperature. We observe that both the metal:olivine ratio and the change in metal phase geometry during heating best explain the bulk conductivity. By combining our electrical results, textural analyses of the samples and previous experimental and numerical works, we propose an electrical profile of the deep interior of Mercury. Comparison of our model with existing conductivity estimates of Mercury's lowermost mantle and CMB from magnetic field observations and thermodynamic calculations supports the hypothesis of a layered CMB-outermost core structure in present-day Mercury.

Constraints from Earth's heat budget on mantle dynamics

NASA Astrophysics Data System (ADS)

Kellogg, L. H.; Ferrachat, S.

2006-12-01

Recent years have seen an increase in the number of proposed models to explain Earth's mantle dynamics: while two end-members, pure layered convection with the upper and lower mantle convecting separately from each other, and pure, whole mantle convection, appear not to satisfy all the observations, several addition models have been proposed. These models include and attempt to characterize least one reservoir that is enriched in radiogenic elements relative to the mid-ocean ridge basalt (MORB) source, as is required to account for most current estimates of the Earth's heat budget. This reservoir would also be responsible for the geochemical signature in some ocean island basalts (OIBs) like Hawaii, but must be rarely sampled at the surface. Our current knowledge of the mass- and heat-budget for the bulk silicate Earth from geochemical, cosmochemical and geodynamical observations and constraints enables us to quantify the radiogenic heat enrichment required to balance the heat budget. Without assuming any particular model for the structure of the reservoir, we first determine the inherent trade-off between heat production rate and mass of the reservoir. Using these constraints, we then investigate the dynamical inferences of the heat budget, assuming that the additional heat is produced within a deep layer above the core-mantle boundary. We carry out dynamical models of layered convection using four different fixed reservoir volumes, corresponding to deep layers of thicknesses 150, 500 1000 and 1600 km, respectively, and including both temperature-dependent viscosity and an instrinsic viscosity jump between upper and lower mantle. We then assess the viability of these cases against 5 criteria: stability of the deep layer through time, topography of the interface, effective density profile, intrinsic chemical density and the heat flux at the CMB.

Learning Gains for Core Concepts in a Serious Game on Scientific Reasoning

ERIC Educational Resources Information Center

Forsyth, Carol; Pavlik, Philip, Jr.; Graesser, Arthur C.; Cai, Zhiqiang; Germany, Mae-lynn; Millis, Keith; Dolan, Robert P.; Butler, Heather; Halpern, Diane

2012-01-01

"OperationARIES!" is an Intelligent Tutoring System that teaches scientific inquiry skills in a game-like atmosphere. Students complete three different training modules, each with natural language conversations, in order to acquire deep-level knowledge of 21 core concepts of research methodology (e.g., correlation does not mean…

New family of graphene-based organic semiconductors: An investigation of photon-induced electronic structure manipulation in half-fluorinated graphene

NASA Astrophysics Data System (ADS)

Walter, Andrew L.; Sahin, Hasan; Kang, Jun; Jeon, Ki-Joon; Bostwick, Aaron; Horzum, Seyda; Moreschini, Luca; Chang, Young Jun; Peeters, Francois M.; Horn, Karsten; Rotenberg, Eli

2016-02-01

The application of graphene to electronic and optoelectronic devices is limited by the absence of reliable semiconducting variants of this material. A promising candidate in this respect is graphene oxide, with a band gap on the order of ˜5 eV , however, this has a finite density of states at the Fermi level. Here, we examine the electronic structure of three variants of half -fluorinated carbon on Sic(0001), i.e., the (6 √{3 }×6 √{3 } ) R 30∘ C/SiC "buffer layer," graphene on this (6 √{3 }×6 √{3 } ) R 30∘ C/SiC buffer layer, and graphene decoupled from the SiC substrate by hydrogen intercalation. Using angle-resolved photoemission, core level photoemission, and x-ray absorption, we show that the electronic, chemical, and physical structure of all three variants is remarkably similar, exhibiting a large band gap and a vanishing density of states at the Fermi level. These results are explained in terms of first-principles calculations. This material thus appears very suitable for applications, even more so since it is prepared on a processing-friendly substrate. We also investigate two separate UV photon-induced modifications of the electronic structure that transform the insulating samples (6.2-eV band gap) into semiconducting (˜2.5 -eV band gap) and metallic regions, respectively.

Detection of subsurface core-level shifts in Si 2p core-level photoemission from Si(111)-(1x1):As

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paggel, J.J.; Hasselblatt, M.; Horn, K.

1997-04-01

The (7 x 7) reconstruction of the Si(111) surface arises from a lowering energy through the reduction of the number of dangling bonds. This reconstruction can be removed by the adsorption of atoms such as hydrogen which saturate the dangling bonds, or by the incorporation of atoms, such as arsenic which, because of the additional electron it possesses, can form three bonds and a nonreactive lone pair orbital from the remaining two electrons. Core and valence level photoemission and ion scattering data have shown that the As atoms replace the top silicon atoms. Previous core level spectra were interpreted inmore » terms of a bulk and a single surface doublet. The authors present results demonstrate that the core level spectrum contains two more lines. The authors assign these to subsurface silicon layers which also experience changes in the charge distribution when a silicon atom is replaced by an arsenic atom. Subsurface core level shifts are not unexpected since the modifications of the electronic structure and/or of photohole screening are likely to decay into the bulk and not just to affect the top-most substrate atoms. The detection of subsurface components suggests that the adsorption of arsenic leads to charge flow also in the second double layer of the Si(111) surface. In view of the difference in atomic radius between As and Si, it was suggested that the (1 x 1): As surface is strained. The presence of charge rearrangement up to the second double layer implies that the atomic coordinates also exhibit deviations from their ideal Si(111) counterparts, which might be detected through a LEED I/V or photoelectron diffraction analysis.« less

Conceptual model analysis of interaction at a concrete-Boom Clay interface

NASA Astrophysics Data System (ADS)

Liu, Sanheng; Jacques, Diederik; Govaerts, Joan; Wang, Lian

In many concepts for deep disposal of high-level radioactive waste, cementitious materials are used in the engineered barriers. For example, in Belgium the engineered barrier system is based on a considerable amount of cementitious materials as buffer and backfill in the so-called supercontainer embedded in the hosting geological formation. A potential hosting formation is Boom Clay. Insight in the interaction between the high-pH pore water of the cementitious materials and neutral-pH Boom Clay pore water is required. Two problems are quite common for modeling of such a system. The first one is the computational cost due to the long timescale model assessments envisaged for the deep disposal system. Also a very fine grid (in sub-millimeter), especially at interfaces has to be used in order to accurately predict the evolution of the system. The second one is whether to use equilibrium or kinetic reaction models. The objectives of this paper are twofold. First, we develop an efficient coupled reactive transport code for this diffusion-dominated system by making full use of multi-processors/cores computers. Second, we investigate how sensitive the system is to chemical reaction models especially when pore clogging due to mineral precipitation is considered within the cementitious system. To do this, we selected two portlandite dissolution models, i.e., equilibrium (fastest) and diffusion-controlled model with precipitation of a calcite layer around portlandite particles (diffusion-controlled dissolution). The results show that with shrinking core model portlandite dissolution and calcite precipitation are much slower than with the equilibrium model. Also diffusion-controlled dissolution smooths out dissolution fronts compared to the equilibrium model. However, only a slight difference with respect to the clogging time can be found even though we use a very small diffusion coefficient (10-20 m2/s) in the precipitated calcite layer.

Deep Convolutional Extreme Learning Machine and Its Application in Handwritten Digit Classification

PubMed Central

Yang, Xinyi

2016-01-01

In recent years, some deep learning methods have been developed and applied to image classification applications, such as convolutional neuron network (CNN) and deep belief network (DBN). However they are suffering from some problems like local minima, slow convergence rate, and intensive human intervention. In this paper, we propose a rapid learning method, namely, deep convolutional extreme learning machine (DC-ELM), which combines the power of CNN and fast training of ELM. It uses multiple alternate convolution layers and pooling layers to effectively abstract high level features from input images. Then the abstracted features are fed to an ELM classifier, which leads to better generalization performance with faster learning speed. DC-ELM also introduces stochastic pooling in the last hidden layer to reduce dimensionality of features greatly, thus saving much training time and computation resources. We systematically evaluated the performance of DC-ELM on two handwritten digit data sets: MNIST and USPS. Experimental results show that our method achieved better testing accuracy with significantly shorter training time in comparison with deep learning methods and other ELM methods. PMID:27610128

Deep Convolutional Extreme Learning Machine and Its Application in Handwritten Digit Classification.

PubMed

Pang, Shan; Yang, Xinyi

2016-01-01

In recent years, some deep learning methods have been developed and applied to image classification applications, such as convolutional neuron network (CNN) and deep belief network (DBN). However they are suffering from some problems like local minima, slow convergence rate, and intensive human intervention. In this paper, we propose a rapid learning method, namely, deep convolutional extreme learning machine (DC-ELM), which combines the power of CNN and fast training of ELM. It uses multiple alternate convolution layers and pooling layers to effectively abstract high level features from input images. Then the abstracted features are fed to an ELM classifier, which leads to better generalization performance with faster learning speed. DC-ELM also introduces stochastic pooling in the last hidden layer to reduce dimensionality of features greatly, thus saving much training time and computation resources. We systematically evaluated the performance of DC-ELM on two handwritten digit data sets: MNIST and USPS. Experimental results show that our method achieved better testing accuracy with significantly shorter training time in comparison with deep learning methods and other ELM methods.

Continuous methane record of abrupt climate change 10-68 ka: sighting Heinrich events in the ice core record

NASA Astrophysics Data System (ADS)

Rhodes, Rachael; Brook, Edward; Chiang, John; Blunier, Thomas; Cheng, Hai; Edwards, R. Lawrence; Maselli, Olivia; McConnell, Joseph; Romanini, Daniele; Severinghaus, Jeffrey; Sowers, Todd; Stowasser, Christopher

2014-05-01

The Last Glacial period was punctuated by millennial scale abrupt climate changes - Dansgaard-Oeschger (D-O) cycles and Heinrich events. Controls on the magnitude and frequency of these climate perturbations, and how they may be inter-related, remain unclear. Specific problems include the difficulty of dating Heinrich sediment layers and local bias of key paleoclimate archives. We present a highly detailed and precise record of ice core methane (CH4), a globally integrated signal, which resolves climatic features in unprecedented resolution. Abrupt CH4 increases are resolved in Heinrich Stadials (HS) 1, 2, 4 and 5 where, in contrast to all D-O cycles, there are no concurrent abrupt changes in Greenland temperature. Using modern-day tropical rainfall variability as an analog, we propose that strong cooling in the North Atlantic severely restricted the northerly range of the Intertropical Convergence Zone (ITCZ), leading to an enhanced wet season over Southern Hemisphere tropical land areas, and consequently driving production of excess CH4 in tropical wetlands. Our findings place four Heinrich events firmly within ice core chronologies and suggest maximum durations of 778 to 1606 yr. CH4 anomalies are only associated with Heinrich events of Hudson Strait provenance, indicating that the tropical impacts of Heinrich events were not uniform.

Large scale motions of multiple limit-cycle high Reynolds number annular and toroidal rotor/stator cavities

NASA Astrophysics Data System (ADS)

Bridel-Bertomeu, Thibault; Gicquel, L. Y. M.; Staffelbach, G.

2017-06-01

Rotating cavity flows are essential components of industrial applications but their dynamics are still not fully understood when it comes to the relation between the fluid organization and monitored pressure fluctuations. From computer hard-drives to turbo-pumps of space launchers, designed devices often produce flow oscillations that can either destroy the component prematurely or produce too much noise. In such a context, large scale dynamics of high Reynolds number rotor/stator cavities need better understanding especially at the flow limit-cycle or associated statistically stationary state. In particular, the influence of curvature as well as cavity aspect ratio on the large scale organization and flow stability at a fixed rotating disc Reynolds number is fundamental. To probe such flows, wall-resolved large eddy simulation is applied to two different rotor/stator cylindrical cavities and one annular cavity. Validation of the predictions proves the method to be suited and to capture the disc boundary layer patterns reported in the literature. It is then shown that in complement to these disc boundary layer analyses, at the limit-cycle the rotating flows exhibit characteristic patterns at mid-height in the homogeneous core pointing the importance of large scale features. Indeed, dynamic modal decomposition reveals that the entire flow dynamics are driven by only a handful of atomic modes whose combination links the oscillatory patterns observed in the boundary layers as well as in the core of the cavity. These fluctuations form macro-structures, born in the unstable stator boundary layer and extending through the homogeneous inviscid core to the rotating disc boundary layer, causing its instability under some conditions. More importantly, the macro-structures significantly differ depending on the configuration pointing the need for deeper understanding of the influence of geometrical parameters as well as operating conditions.

Models of a partially hydrated Titan interior with a clathrate crust

NASA Astrophysics Data System (ADS)

Lunine, J. I.; Castillo-Rogez, J. C.; Choukroun, M.; Sotin, C.

2012-04-01

We present a model of the interior evolution of Titan over time, assuming the silicate core was hydrated early in Titan’s history and is dehydrating over time. The original model presented in Castillo-Rogez and Lunine (2010) was motivated by a Cassini-derived moment of inertia (Iess et al., 2010) for Titan too large to be accommodated by classical fully differentiated models in which an anhydrous silicate core was overlain by a water ice (with possible perched ocean) mantle. Our model consists of a silicate core still in the process of dehydrating today, a situation made possible by the leaching of radiogenic potassium from the silicates into the perched liquid water ocean. The most recent version of our model accounts for the likely presence of large amounts of methane in the upper crust invoked to explain methane’s persistence at present and through geologic time (Tobie et al. 2006). The methane-rich crust turns out to have essentially no bearing on the temperature of the silicate core and hence the timing of dehydration, but it profoundly affects the thickness of the high-pressure ice layer beneath the ocean. Indeed, the insulating effect of the methane clathrate crust could have delayed the formation of the high-pressure layer, resulting in the interaction of liquid water with the silicate core for extended periods of time. Although a high-pressure ice layer is likely in place today, it is thin enough that plumes of hot water from the dehydrating core probably breach that layer. The implications of such a deep hydrothermal system for the later stages of the evolution of Titan’s interior and surface will be discussed. Part of this work has been performed at the Jet Propulsion Laboratory, California Institute of Technology, under contract to NASA. Government sponsorship acknowledged. References: Castillo-Rogez, J., Lunine, J.: “Evolution of Titan’s rocky core constrained by Cassini observations”. GRL, Vol. 37, L20205, 2010. Iess, L., et al.: “Gravity field, shape, and moment of inertia of Titan”. Science, Vol. 327, 1367-1369. Tobie, G., et al.: “Episodic outgassing as the origin of atmospheric methane on Titan”. Nature 440: 61-64, 2006.

Annually resolved ice core records of tropical climate variability over the past ~1800 years.

PubMed

Thompson, L G; Mosley-Thompson, E; Davis, M E; Zagorodnov, V S; Howat, I M; Mikhalenko, V N; Lin, P-N

2013-05-24

Ice cores from low latitudes can provide a wealth of unique information about past climate in the tropics, but they are difficult to recover and few exist. Here, we report annually resolved ice core records from the Quelccaya ice cap (5670 meters above sea level) in Peru that extend back ~1800 years and provide a high-resolution record of climate variability there. Oxygen isotopic ratios (δ(18)O) are linked to sea surface temperatures in the tropical eastern Pacific, whereas concentrations of ammonium and nitrate document the dominant role played by the migration of the Intertropical Convergence Zone in the region of the tropical Andes. Quelccaya continues to retreat and thin. Radiocarbon dates on wetland plants exposed along its retreating margins indicate that it has not been smaller for at least six millennia.

Stratospheric mountain wave attenuation in positive and negative ambient wind shear

NASA Astrophysics Data System (ADS)

Kruse, C. G.; Smith, R. B.

2016-12-01

Recently, much has been learned about the vertical propagation and attenuation of mountain waves launched by the Southern Alps of New Zealand (NZ) from the Deep Propagating Gravity Wave Experiment (DEEPWAVE) field campaign. Over NZ, approximately half of mountain wave events are strongly attenuated in a lower-stratospheric "valve layer," defined as a layer of reduced wind with no critical levels. Within a valve layer, negative wind shear causes mountain waves steepen and attenuate, with the amount of transmitted momentum flux controlled by the minimum wind speed within the layer. The other half of wave events are deep (propagating to 35+ km), usually with positive wind shear. Within these deep events, increasing amplitude with decreasing density causes mountain waves to attenuate gradually (after spatial/temporal averaging). Global reanalyses indicate that this valve layer is a climatological feature in the wintertime mid-latitudes above the subtropical jet, while deep events and gradual attenuation occur over higher latitudes below the polar stratospheric jet. The local physics of mountain wave attenuation in positive and negative ambient wind shear are investigated using realistic winter-long (JJA) 6-km resolution Weather Research and Forecasting (WRF) model simulations over the Andes. Attention is given to the spatiotemporal variability of wave attenuation and the various factors driving this variability (e.g. variability in wave generation, ambient conditions at attenuation level, inherent wave-induced instabilities). Mesoscale potential vorticity generation is used as an indicator of wave attenuation. Additionally, regionally integrated wave momentum flux and gravity wave drag (GWD) within WRF are quantified and compared with parameterized quantities in the MERRA1 and 2 reanalyses.

Pulsed Laser Techniques to Determine Lattice and Radiative Thermal Conductivity of Deep Planetary Materials at Extreme Pressure-Temperature Conditions

NASA Astrophysics Data System (ADS)

Lobanov, S.; Goncharov, A. F.; Holtgrewe, N.; Konopkova, Z.; McWilliams, R. S.

2017-12-01

Thermal conductivity of deep planetary materials determines the planetary heat transport mode and properties (e.g. magnetic field) and can be used to decipher the planetary thermal history. Due to the lack of direct measurements of the lattice and radiative conductivity of the relevant materials at the planetary conditions, the current geodynamical models use theoretical calculations and extrapolations of the available experimental data. Here we describe our pulsed laser techniques that enable direct measurements of the lattice and radiative lattice conductivity of the Earth's mantle and core materials and also of noble gases and simple molecules present in the interiors of giant planets (e.g. hydrogen). Flash heating laser techniques working in a pump-probe mode that include time resolved two-side radiative and thermoreflection temperature probes employ various laser and photo-detector configurations, which provide a measure of the thermal fluxes propagating through the samples confined in the diamond anvil cell cavity. A supercontinuum ultra-bright broadband laser source empower accurate measurements of the optical properties of planetary materials used to extract the radiative conductivity. Finite element calculations serve to extract the temperature and pressure dependent thermal conductivity and temperature gradients across the sample. We report thermal conductivity measurements of the Earth's minerals (postperovskite, bridgmanite, ferropericlase) and their assemblies (pyrolite) and core materials (Fe and alloys with Si and O) at the realistic deep Earth's pressure temperature conditions. We thank J.-F.Lin, M. Murakami, J. Badro for contributing to this work.

Dynamical effects on the core-mantle boundary from depth-dependent thermodynamical properties of the lower mantle

NASA Technical Reports Server (NTRS)

Zhang, Shuxia; Yuen, David A.

1988-01-01

A common assumption in modeling dynamical processes in the lower mantle is that both the thermal expansivity and thermal conductivity are reasonably constant. Recent work from seismic equation of state leads to substantially higher values for the thermal conductivity and much lower thermal expansivity values in the deep mantle. The dynamical consequences of incorporating depth-dependent thermodynamic properties on the thermal-mechanical state of the lower mantle are examined with the spherical-shell mean-field equations. It is found that the thermal structure of the seismically resolved anomalous zone at the base of the mantle is strongly influenced by these variable properties and, in particular, that the convective distortion of the core-mantle boundary (CMB) is reduced with the decreasing thermal expansivity. Such a reduction of the dynamically induced topography from pure thermal convection would suggest that some other dynamical mechanism must be operating at the CMB.

Eddy-resolving 1/10° model of the World Ocean

NASA Astrophysics Data System (ADS)

Ibrayev, R. A.; Khabeev, R. N.; Ushakov, K. V.

2012-02-01

The first results on simulating the intra-annual variability of the World Ocean circulation by use of the eddy-resolving model are considered. For this purpose, a model of the World Ocean with a 1/10° horizontal resolution and 49 vertical levels was developed (a 1/10 × 1/10 × 49 model of the World Ocean). This model is based on the traditional system of three-dimensional equations of the large-scale dynamics of the ocean and boundary conditions with an explicit allowance for water fluxes on the free surface of the ocean. The equations are written in the tripolar coordinate system. The numerical method is based on the separation of the barotropic and baroclinic components of the solution. Discretization in time is implemented using explicit schemes allowing effective parallelization for a large number of processors. The model uses the sub-models of the boundary layer of the atmosphere and the submodel of sea-ice thermodynamics. The model of the World Ocean was developed at the Institute of Numerical Mathematics of the Russian Academy of Sciences (INM RAS) and the P.P. Shirshov Institute of Oceanogy (IO RAS). The formulation of the problem of simulating the intra-annual variability of thermohydrodynamic processes of the World Ocean and the parameterizations that were used are considered. In the numerical experiment, the temporal evolution of the atmospheric effect is determined by the normal annual cycle according to the conditions of the international Coordinated Ocean-Ice Reference Experiment (CORE-I). The calculation was carried out on a multiprocessor computer with distributed memory; 1601 computational cores were used. The presented analysis demonstrates that the obtained results are quite satisfactory when compared to the results that were obtained by other eddy-resolving models of the global ocean. The analysis of the model solution is, to a larger extent, of a descriptive character. A detailed analysis of the results is to be presented in following works. This experiment is a significant first step in developing the eddy-resolving model of the World Ocean.

Radiocarbon dating Arctic deep marine sediment to refine the usage of Mn pattern as a stratigraphic tool

NASA Astrophysics Data System (ADS)

Chiu, Pin-Yao Bernie; Löwemark, Ludvig

2016-04-01

The distinctive pattern of Mn content in Arctic deep marine sediment has been used as a proxy to indicate glacial-interglacial cyclicity (Löwemark et al., 2014). As has been observed in many sediment cores, Mn peaks correspond to warm interglacial periods. In order to improve the preciseness of Mn pattern as a proxy, we collected the foraminifera Neogloboquadrina pachyderma (sinistral) from brownish, Mn-rich layers, and performed radiocarbon dating on selected cores collected during the LOMROG07, LOMROG09 and LOMROG12 expeditions. Additional cores form the YMER and AO96 expeditions are also included. Based on our general understanding of the Mn system in the Arctic Ocean, we predicted a Mn pattern with a high peak in the uppermost core top, representing the Holocene. This Holocene peak in Mn is separated from the underlying warm period MIS 3 by a Mn-poor interval also characterized by a drop in Ca. This Mn and Ca poor interval reperesents MIS 2 and the LGM. Older warm periods, such as MIS 3, 5, 7 etc will display a similar pattern with distinct Mn peaks, separated by Mn minima representing cold iperiods For example, the MIS 5 sometimes shown a distinct pattern with three Mn peaks representing MIS 5a, 5c and 5e. However, there are still some limitations in the applicability of Mn stratigraphy, such as the remobilization of the Mn layer and the core-top loss during coring. We performed AMS carbon 14 dating on more than 10 cores, and the result revealed several cases of lost core tops, leading to depletion or complete loss of the Holocene interval. In several cores, our AMS dating revealed a hiatus in the MIS2 interval. The complete lack of MIS2 sediment likely is the result of extremely slow sedimentation rate due to severe sea ice conditions, while places with records of LGM may be the result of polynyas within the sea ice, or certain circulation pattern. Consequently, although Mn pattern can be used as a preliminary tool to identify glacial-interglacial cycles, the loss core tops and glacial hiatuses limits the usage and accuracy of the correlation of Mn stratigraphies. Therefore, additional radiocarbon dating can refine our understanding of the Mn patterns in Arctic marine sediment and help to make it a better proxy for both paleoenvironmental reconstructions and for the age models. Further study on the cause of hiatus often encountered in the LGM interval is necessary to ensure the usefulness of Mn stratigraphy.

Presumption of large-scale heterogeneity at the top of the outer core basal layer

NASA Astrophysics Data System (ADS)

Souriau, Annie

2015-04-01

A layer of reduced P-velocity gradient with thickness of about 100-200 km has been identified at the base of the liquid core from seismological methods. It has been interpreted as a dense layer resulting from partial re-melting of the inner core, which is depleted in light elements with respect to the liquid core during freezing. In an attempt to specify where freezing and re-melting occur, the structure of this basal layer is investigated with the seismological core phase PKPbc which has its turning point in the lower third of the outer core. The large PKPbc data set of the EHB catalog distributed by the International Seismological Centre is analyzed. In order to compensate for the uneven distribution of the data and to minimize the influence of mantle heterogeneities, the travel time anomalies are binned inside equal area and equal azimuth sectors sampling the base of the liquid core at different depths. Most of the observed variations in the binned travel time residuals are not significant according to their confidence level. The only features which could be significant are a large patch with a velocity increase of about 0.5% located at the top of the basal layer beneath the eastern hemisphere, and the complementary velocity decrease beneath the western hemisphere and the South pole. This observation suggests that some freezing or re-melting processes occur at the top of the basal layer with a hemispherical dissymmetry. If confirmed, it may give strong constraints on the fate of the light elements during the freezing and re-melting process and on their interaction with the basal layer and the overlying liquid core.

Effect of Zinc Incorporation on the Performance of Red Light Emitting InP Core Nanocrystals.

PubMed

Xi, Lifei; Cho, Deok-Yong; Besmehn, Astrid; Duchamp, Martial; Grützmacher, Detlev; Lam, Yeng Ming; Kardynał, Beata E

2016-09-06

This report presents a systematic study on the effect of zinc (Zn) carboxylate precursor on the structural and optical properties of red light emitting InP nanocrystals (NCs). NC cores were assessed using X-ray photoelectron spectroscopy (XPS), X-ray absorption spectroscopy (XAS), energy-dispersive X-ray spectroscopy (EDX), and high-resolution transmission electron microscopy (HRTEM). When moderate Zn:In ratios in the reaction pot were used, the incorporation of Zn in InP was insufficient to change the crystal structure or band gap of the NCs, but photoluminescence quantum yield (PLQY) increased dramatically compared with pure InP NCs. Zn was found to incorporate mostly in the phosphate layer on the NCs. PL, PLQY, and time-resolved PL (TRPL) show that Zn carboxylates added to the precursors during NC cores facilitate the synthesis of high-quality InP NCs by suppressing nonradiative and sub-band-gap recombination, and the effect is visible also after a ZnS shell is grown on the cores.

Electronic structure of the chiral helimagnet and 3d-intercalated transition metal dichalcogenide Cr 1/3NbS 2

DOE PAGES

Sirca, N.; Mo, S. -K.; Bondino, F.; ...

2016-08-18

The electronic structure of the chiral helimagnet Cr 1/3NbS 2 has been studied with core level and angle-resolved photoemission spectroscopy (ARPES). Intercalated Cr atoms are found to be effective in donating electrons to the NbS 2 layers but also cause significant modifications of the electronic structure of the host NbS 2 material. Specifically, the data provide evidence that a description of the electronic structure of Cr 1/3NbS 2 on the basis of a simple rigid band picture is untenable. The data also reveal substantial inconsistencies with the predictions of standard density functional theory. In conclusion, the relevance of these resultsmore » to the attainment of a correct description of the electronic structure of chiral helimagnets, magnetic thin films/multilayers, and transition metal dichalcogenides intercalated with 3d magnetic elements is discussed.« less

Microlensed dual-fiber probe for depth-resolved fluorescence measurements

NASA Astrophysics Data System (ADS)

Choi, Hae Young; Ryu, Seon Young; Kim, Jae Young; Kim, Geon Hee; Park, Seong Jun; Lee, Byeong Ha; Chang, Ki Soo

2011-07-01

We propose and demonstrate a compact microlensed dual-fiber probe that has a good collection efficiency and a high depth-resolution ability for fluorescence measurements. The probe is formed with a conventional fusion splicer creating a common focusing lens on two fibers placed side by side. The collection efficiency of the fabricated probe was evaluated by measuring the fluorescence signal of a fresh ginkgo leaf. It was shown experimentally that the proposed probe could effectively collect the fluorescence signal with a six-fold increase compared to that of a general flat-tipped probe. The beam propagation method was used to design a probe with an optimized working distance and an improved resolving depth. It was found that the working distance depends mainly on the radius of curvature of the lens, whereas the resolving depth is determined by the core diameters of the illumination and collection fibers. The depth-resolved ability of probes with working distances of ~100 μm and 300 μm was validated by using a two-layer tissue phantom. The experimental results demonstrate that the microlensed dual-fiber probe has the potential to facilitate depth-resolved fluorescence detection of epithelial tissue.

Does the Deep Layer of the Deep Temporalis Fascia Really Exist?

PubMed

Li, Hui; Li, Kaide; Jia, Wenhao; Han, Chaoying; Chen, Jinlong; Liu, Lei

2018-04-14

It has been widely accepted that a split of the deep temporal fascia occurs approximately 2 to 3 cm above the zygomatic arch and extends into the superficial and deep layers. The deep layer of the deep temporal fascia is between the superficial temporal fat pad and the temporal muscle. However, during procedures, the authors noted the absence of the deep layer of the deep temporal fascia between the superficial temporal fat pad and the temporal muscle. This prospective study was conducted to clarify the presence or absence of a deep layer of the deep temporal fascia. Anatomic layers of the soft tissues of the temporal region, with reference to the deep temporal fascia, were investigated in 130 cases operated on for zygomaticofacial fractures using the supratemporal approach from June 2013 to June 2017. Of 130 surgeries, the authors found the absence of a thick, obviously identifiable, fascial layer between the superficial temporal fat pad and the temporal muscle. In fact, the authors found nothing above the temporal muscle in most cases. In a few cases, the authors observed only a small amount of scattered loose connective tissue between the superficial temporal fat pad and the temporal muscle. This clinical study showed the absence of a thick, obviously identifiable, fascial layer between the superficial temporal fat pad and the temporal muscle, which suggests that a "deep layer of the deep temporal fascia" might not exist. Copyright © 2018. Published by Elsevier Inc.

Deep mantle roots and continental hypsometry: implications for whole-Earth elemental cycling, long-term climate, and the Cambrian explosion

NASA Astrophysics Data System (ADS)

Lee, C. T.

2016-12-01

Most of Earth's continents today are above sea level, but the presence of thick packages of ancient sediments on top of the stable cores of continents indicates that continents must have been submerged at least once in their past. Elevations of continents are controlled by the interplay between crustal thickness, mantle root thickness and the temperature of the ambient convecting mantle. The history of a continent begins with mountain building through magmatic or tectonic crustal thickening, during which exhumation of deep-seated igneous and metamorphic rocks are highest. Mountain building is followed by a long interval of subsidence as a result of continued, but decreasing erosion and thermal relaxation, the latter in the form of a growing thermal boundary layer. Subsidence is manifest first as a boring interval in which no sedimentary record is preserved, followed by continent-scale submergence wherein sediments are deposited directly on deep-seated igneous/metamorphic basement, generating a major disconformity. The terminal resting elevation of a mature continent, however, is defined by the temperature of the ambient convecting mantle: below sea level when the mantle is hot and above sea level when the mantle is cold. Using thermobarometric constraints on secular cooling of Earth's mantle, our results suggest that Earth, for most of its history, must have been a water world, with regions of land confined to narrow orogenic belts and oceans characterized by deep basins and shallow continental seas, the latter serving as repositories of sediments and key redox-sensitive biological nutrients, such as phosphorous. Cooling of the Earth led to the gradual and irreversible rise of the continents, culminating in rapid emergence, through fits and starts and possible instabilities in climate, between 500-1000 Ma. Such emergence fundamentally altered marine biogeochemical cycling, continental weathering and the global hydrologic cycle, defining the backdrop for the Cambrian explosion, the largest biological diversification event in Earth's history.

Role of storms and forest practices in sedimentation of an Oregon Coast Range lake

NASA Astrophysics Data System (ADS)

Richardson, K.; Hatten, J. A.; Wheatcroft, R. A.; Guerrero, F. J.

2014-12-01

The design of better management practices in forested watersheds to face climate change and the associated increase in the frequency of extreme events requires a better understanding of watershed responses to extreme events in the past and also under management regimes. One of the most sensitive watershed processes affected is sediment yield. Lake sediments record events which occur in a watershed and provide an opportunity to examine the interaction of storms and forest management practices in the layers of the stratigraphy. We hypothesize that timber harvesting and road building since the 1900s has resulted in increases in sedimentation; however, the passage of the Oregon Forest Practices Act (OFPA) in 1972 has led to a decrease in sedimentation. Sediment cores were taken at Loon Lake in the Oregon Coast Range. The 32-m deep lake captures sediment from a catchment highly impacted by recent land use and episodic Pacific storms. We can use sedimentological tools to measure changes in sediment production as motivated by extreme floods before settlement, during a major timber harvesting period, and after installation of forestry Best Management Practices. Quantification of changes in particle size and elemental composition (C, N, C/N) throughout the cores can elucidate changes in watershed response to extreme events, as can changes in layer thickness. Age control in the cores is being established by Cesium-137 and radiocarbon dating. Given the instrumental meteorological data and decadal climate reconstructions, we will disentangle climate driven signals from changes in land use practices. The sediment shows distinct laminations and varying thickness of layers throughout the cores. Background deposition is composed of thin layers (<0.5 cm) of fine silts and clays, punctuated by thicker layers (3-25 cm) every 10 to 75 cm. These thick layers consist of distinctly textured units, generally fining upward. We interpret the thick layers in Loon Lake to be deposited by sediment-producing floods throughout much of the 1500-year lifespan of this lake. We will explore the relationship between sedimentation, land use, and climate forcing events to determine if the OFPA is having an effect on reducing sedimentation rates as a result of extreme magnitude storm events.

Trace metal in sediment from a deep-sea floor of Makassar Strait

NASA Astrophysics Data System (ADS)

Budianto, F.; Lestari

2018-02-01

Makassar Strait is located in the entrance of Indonesian Through Flow (ITF). However, the geochemistry of metals in sediment within Makassar Strait remains unexplored. The aim of this study was to measure the concentration of metals in sediment and to assess the sediment quality based on those metals concentrations. The sediment was collected from 632-4730 m in depth using giant piston corer on R/V Baruna Jaya VIII in December 2014. In each observation point, three layers of sediment were sub-sampled from the core i.e. surface layer (0-5 cm), middle layer (45-55 cm) and bottom layer. The metals were analyzed using acid digestion procedure followed by Atomic Absorption Spectrophotometer. The result indicated that the metal has spatially insignificant differences in sediment and the increase of metal concentration by depth was noticed. The Enrichment factor presented as no enrichment to minor enrichment of metal in sediment.

Unsupervised deep learning reveals prognostically relevant subtypes of glioblastoma.

PubMed

Young, Jonathan D; Cai, Chunhui; Lu, Xinghua

2017-10-03

One approach to improving the personalized treatment of cancer is to understand the cellular signaling transduction pathways that cause cancer at the level of the individual patient. In this study, we used unsupervised deep learning to learn the hierarchical structure within cancer gene expression data. Deep learning is a group of machine learning algorithms that use multiple layers of hidden units to capture hierarchically related, alternative representations of the input data. We hypothesize that this hierarchical structure learned by deep learning will be related to the cellular signaling system. Robust deep learning model selection identified a network architecture that is biologically plausible. Our model selection results indicated that the 1st hidden layer of our deep learning model should contain about 1300 hidden units to most effectively capture the covariance structure of the input data. This agrees with the estimated number of human transcription factors, which is approximately 1400. This result lends support to our hypothesis that the 1st hidden layer of a deep learning model trained on gene expression data may represent signals related to transcription factor activation. Using the 3rd hidden layer representation of each tumor as learned by our unsupervised deep learning model, we performed consensus clustering on all tumor samples-leading to the discovery of clusters of glioblastoma multiforme with differential survival. One of these clusters contained all of the glioblastoma samples with G-CIMP, a known methylation phenotype driven by the IDH1 mutation and associated with favorable prognosis, suggesting that the hidden units in the 3rd hidden layer representations captured a methylation signal without explicitly using methylation data as input. We also found differentially expressed genes and well-known mutations (NF1, IDH1, EGFR) that were uniquely correlated with each of these clusters. Exploring these unique genes and mutations will allow us to further investigate the disease mechanisms underlying each of these clusters. In summary, we show that a deep learning model can be trained to represent biologically and clinically meaningful abstractions of cancer gene expression data. Understanding what additional relationships these hidden layer abstractions have with the cancer cellular signaling system could have a significant impact on the understanding and treatment of cancer.

Parallel Transport with Sheath and Collisional Effects in Global Electrostatic Turbulent Transport in FRCs

NASA Astrophysics Data System (ADS)

Bao, Jian; Lau, Calvin; Kuley, Animesh; Lin, Zhihong; Fulton, Daniel; Tajima, Toshiki; Tri Alpha Energy, Inc. Team

2017-10-01

Collisional and turbulent transport in a field reversed configuration (FRC) is studied in global particle simulation by using GTC (gyrokinetic toroidal code). The global FRC geometry is incorporated in GTC by using a field-aligned mesh in cylindrical coordinates, which enables global simulation coupling core and scrape-off layer (SOL) across the separatrix. Furthermore, fully kinetic ions are implemented in GTC to treat magnetic-null point in FRC core. Both global simulation coupling core and SOL regions and independent SOL region simulation have been carried out to study turbulence. In this work, the ``logical sheath boundary condition'' is implemented to study parallel transport in the SOL. This method helps to relax time and spatial steps without resolving electron plasma frequency and Debye length, which enables turbulent transports simulation with sheath effects. We will study collisional and turbulent SOL parallel transport with mirror geometry and sheath boundary condition in C2-W divertor.

Bomb fall-out 236U as a global oceanic tracer using an annually resolved coral core

PubMed Central

Winkler, Stephan R.; Steier, Peter; Carilli, Jessica

2012-01-01

Anthropogenic 236U (t½=23.4 My) is an emerging isotopic ocean tracer with interesting oceanographic properties, but only with recent advances in accelerator mass spectrometry techniques is it now possible to detect the levels from global fall-out of nuclear weapons testing across the water column. To make full use of this tracer, an assessment of its input into the ocean over the past decades is required. We captured the bomb-pulse of 236U in an annually resolved coral core record from the Caribbean Sea. We thereby establish a concept which gives 236U great advantage – the presence of reliable, well-resolved chronological archives. This allows studies of not only the present distribution pattern, but gives access to the temporal evolution of 236U in ocean waters over the past decades. PMID:23564966

Validating a Conceptual Framework for the Core Concept of "Cell-Cell Communication"

ERIC Educational Resources Information Center

Michael, Joel; Martinkova, Patricia; McFarland, Jenny; Wright, Ann; Cliff, William; Modell, Harold; Wenderoth, Mary Pat

2017-01-01

We have created and validated a conceptual framework for the core physiology concept of "cell-cell communication." The conceptual framework is composed of 51 items arranged in a hierarchy that is, in some instances, four levels deep. We have validated it with input from faculty who teach at a wide variety of institutional types. All…

1.5 My benthic foraminiferal B/Ca record of carbonate chemistry in the deep Atlantic: Implications for ocean alkalinity and atmospheric CO2

NASA Astrophysics Data System (ADS)

Rosenthal, Y.; Sosdian, S. M.; Toggweiler, J. R.

2017-12-01

Most hypotheses to explain glacial-interglacial changes in atmospheric CO2 invoke shifts in ocean alkalinity explain roughly half the reduction in glacial CO2 via CaCO3 compensatory mechanism. It follows that changes in CaCO3 burial occur in response to an increase in deep ocean respired carbon content. To date our understanding of this process comes from benthic carbon isotope and %CaCO3 records. However, to understand the nature of the ocean's buffering capacity and its role in modulating pCO2, orbitally resolved reconstructions of the deep ocean carbonate system parameters are necessary. Here we present a 1.5 Myr orbitally resolved deep ocean calcite saturation record (ΔCO32-) derived from benthic foraminiferal B/Ca ratios in the North Atlantic. Glacial B/Ca values decline across the mid-Pleistocene transition (MPT) suggesting increased sequestration of carbon in the deep Atlantic. The magnitude, timing, and structure of deep Atlantic Ocean ΔCO32- and %CaCO3 cycles contrast with the small amplitude, anti-phased swings in IndoPacific ΔCO32- and %CaCO3 during the mid-to-late Pleistocene. Increasing corrosivity of the deep Atlantic causes the locus of CaCO3 burial to shift into the equatorial Pacific where the flux of CaCO3 to the seafloor is high enough to establish and maintain a new "hot spot". We propose that the CO32- in the deep IndoPacific rises in response to the same mechanism that keeps the CO32- in the deep Atlantic low and the atmospheric CO2 low. The increase in interglacial atmospheric pCO2 levels following the Mid-Brunhes event ( 400ka) are associated with increased G/IG ΔCO3 amplitude, expressed by a decrease in the glacial ΔCO32- values. We propose the low persistent ΔCO32- levels at Marine Isotope Stage (MIS) 12 set the stage for the high pCO2 levels at MIS 11 via an increase in whole ocean alkalinity followed by enhanced CaCO3 preservation. Based on this, we suggest that the development of classic (`anticorrelated') CaCO3 patterns was driven by increased stratification and worsening ventilation in the deep Atlantic across the MPT.

Late Quaternary sediment deposition of core MA01 in the Mendeleev Ridge, the western Arctic Ocean: Preliminary results

NASA Astrophysics Data System (ADS)

Park, Kwang-Kyu; Kim, Sunghan; Khim, Boo-Keun; Xiao, Wenshen; Wang, Rujian

2014-05-01

Late Quaternary deep marine sediments in the Arctic Ocean are characterized by brown layers intercalated with yellowish to olive gray layers (Poore et al., 1999; Polyak et al., 2004). Previous studies reported that the brown and gray layers were deposited during interglacial (or interstadial) and glacial (or stadial) periods, respectively. A 5.5-m long gravity core MA01 was obtained from the Mendeleev Ridge in the western Arctic Ocean by R/V Xue Long during scientific cruise CHINARE-V. Age (~450 ka) of core MA01 was tentatively estimated by correlation of brown layers with an adjacent core HLY0503-8JPC (Adler et al., 2009). A total of 22 brown layers characterized by low L* and b*, high Mn concentration, and abundant foraminifera were identified. Corresponding gray layers are characterized by high L* and b*, low Mn concentration, and few foraminiferal tests. Foraminifera abundance peaks are not well correlated to CaCO3 peaks which occurred with the coarse-grained (>0.063 mm) fractions (i.e., IRD) both in brown and gray layers. IRDs are transported presumably by sea ice for the deposition of brown layers and by iceberg for the deposition of gray layers (Polyak et al., 2004). A strong correlation coefficient (r2=0.89) between TOC content and C/N ratio indicates that the major source of organic matter is terrestrial. The good correlations of CaCO3 content to TOC (r2=0.56) and C/N ratio (r2=0.69) imply that IRDs contain detrital CaCO3 which mainly originated from the Canadian Arctic Archipelago. In addition, high kaolinite/chlorite (K/C) ratios mostly correspond to CaCO3 peaks, which suggests that the fine-grained particles in the Mendeleev Ridge are transported from the north coast Alaska and Canada where Mesozoic and Cenozoic strata are widely distributed. Thus, the Beaufort Gyre, the predominant surface current in the western Arctic Ocean, played an important role in the sediment delivery to the Mendeleev Ridge. It is worthy of note that the TOC and CaCO3 peaks are obviously distinct in the upper part of core MA01, whereas these peaks are reduced in the lower part of the core. More study on these contrasting features is in progress. References Adler, R.E., Polyak, L., Ortiz, J.D., Kaufman, D.S., Channell, J.E.T., Xuan, C., Grottoli, A.G., Sellén, E., and Crawford, K.A., 2009. Global and Planetary Change 68(1-2), 18-29. Polyak, L., Curry, W.B., Darby, D.A., Bischof, J., and Cronin, T.M., 2004. Palaeogeography, Palaeoclimatology, Palaeoecology 203, 73-93. Poore, R., Osterman, L., Curry, W., and Phillips, R., 1999. Geology 27, 759-762.

Mineralogical and Geochemical Analyses of Antarctic Lake Sediments: A Reflectance and Moessbauer Spectroscopy Study with Applications for Remote Sensing on Mars

NASA Technical Reports Server (NTRS)

Froeschl, Heinz; Lougear, Andre; Trautwein, Alfred X.; Newton, Jason; Doran, Peter T.; Koerner, Wilfried; Koeberl, Christian; Bishop, Janice (Technical Monitor); DeVincenzi, Donald L. (Technical Monitor)

2000-01-01

Lakebottom sediments from the Dry Valleys region of Antarctica have been analyzed here in order to study the influence of water chemistry on the mineralogy and geochemistry of these sediments, as well as to evaluate techniques for remote spectral identification of potential biomarker minerals on Mars. Lakes from the Dry Valleys region of Antarctica have been investigated as possible analogs for extinct lake environments on early Mars. Sediment cores were collected in the present study from perennially ice-covered Lake Hoare in the Taylor Valley. These sediments were taken from a core in an oxic region of the lake and another core in an anoxic zone. Differences between the two cores were observed in the sediment color, Fe(II)/Fe(III) ratio, the presence of pyrite, the abundance of Fe, S and some trace elements, and the C, N and S isotope fractionation patterns. The results of visible-infrared reflectance spectroscopy (0.3-25 microns) Mossbauer spectroscopy (77 and 4 K) and X-ray diffraction are combined to determine the mineralogy and composition of these samples. The sediments are dominated by plagioclase, K-feldspar, quartz and pyroxene. Algal mats grow on the bottom of the lake and organic material has been found throughout the cores. Calcite is abundant in some layers of the aerobic core (shallow region) and pyrite is abundant in some layers of the anaerobic core (deep region). Analysis of the spectroscopic features due to organics and carbonates with respect to the abundance of organic C and carbonate contents was performed in order to select optimal spectral bands for remote identification of these components in planetary regoliths. Carbonate bands near 4 and 6.8 microns (approx.2500 and 1500/cm) were detected for carbonate abundances as low as 0.1 wt.% CO2. Organic features at 3.38, 3.42 and 3.51 microns (2960, 2925 and 2850/cm) were detected for organic C abundances as low as 0.06 wt.% C. The d13C trends show a more complex organic history for the anaerobic sediments than for the aerobic sediments. The biogenic pyrite found in the anaerobic core is associated with lighter d34S values and high organic C levels and could be used as a biomarker mineral for paleolakes on Mars.

Characteristics of the deep ocean carbon system during the past 150,000 years: ΣCO2 distributions, deep water flow patterns, and abrupt climate change

PubMed Central

Boyle, Edward A.

1997-01-01

Studies of carbon isotopes and cadmium in bottom-dwelling foraminifera from ocean sediment cores have advanced our knowledge of ocean chemical distributions during the late Pleistocene. Last Glacial Maximum data are consistent with a persistent high-ΣCO2 state for eastern Pacific deep water. Both tracers indicate that the mid-depth North and tropical Atlantic Ocean almost always has lower ΣCO2 levels than those in the Pacific. Upper waters of the Last Glacial Maximum Atlantic are more ΣCO2-depleted and deep waters are ΣCO2-enriched compared with the waters of the present. In the northern Indian Ocean, δ13C and Cd data are consistent with upper water ΣCO2 depletion relative to the present. There is no evident proximate source of this ΣCO2-depleted water, so I suggest that ΣCO2-depleted North Atlantic intermediate/deep water turns northward around the southern tip of Africa and moves toward the equator as a western boundary current. At long periods (>15,000 years), Milankovitch cycle variability is evident in paleochemical time series. But rapid millennial-scale variability can be seen in cores from high accumulation rate series. Atlantic deep water chemical properties are seen to change in as little as a few hundred years or less. An extraordinary new 52.7-m-long core from the Bermuda Rise contains a faithful record of climate variability with century-scale resolution. Sediment composition can be linked in detail with the isotope stage 3 interstadials recorded in Greenland ice cores. This new record shows at least 12 major climate fluctuations within marine isotope stage 5 (about 70,000–130,000 years before the present). PMID:11607737

Investigation of low leakage current radiation detectors on n-type 4H-SiC epitaxial layers

NASA Astrophysics Data System (ADS)

Nguyen, Khai V.; Chaudhuri, Sandeep K.; Mandal, Krishna C.

2014-09-01

The surface leakage current of high-resolution 4H-SiC epitaxial layer Schottky barrier detectors has been improved significantly after surface passivations of 4H-SiC epitaxial layers. Thin (nanometer range) layers of silicon dioxide (SiO2) and silicon nitride (Si3N4) were deposited on 4H-SiC epitaxial layers using plasma enhanced chemical vapor deposition (PECVD) on 20 μm thick n-type 4H-SiC epitaxial layers followed by the fabrication of large area (~12 mm2) Schottky barrier radiation detectors. The fabricated detectors have been characterized through current-voltage (I-V), capacitance-voltage (C-V), and alpha pulse height spectroscopy measurements; the results were compared with that of detectors fabricated without surface passivations. Improved energy resolution of ~ 0.4% for 5486 keV alpha particles was observed after passivation, and it was found that the performance of these detectors were limited by the presence of macroscopic and microscopic crystal defects affecting the charge transport properties adversely. Capacitance mode deep level transient studies (DLTS) revealed the presence of a titanium impurity related shallow level defects (Ec-0.19 eV), and two deep level defects identified as Z1/2 and Ci1 located at Ec-0.62 and ~ Ec-1.40 eV respectively.

Trials and Tribulations of Fluorescent Dissolved Organic Matter Chemical Interpretations: A case study of polar ice cores

NASA Astrophysics Data System (ADS)

D'Andrilli, J.

2017-12-01

Excitation emission matrix fluorescence spectroscopy is widely applied for rapid dissolved organic matter (DOM) characterization in aquatic systems. Fluorescent DOM surveys are booming, not only as a central focus in aquatic environments, but also as an important addition to interdisciplinary research (e.g., DOM analysis in concert with ice core paleoclimate reconstructions, stream metabolism, hydrologic regimes, agricultural developments, and biological activity), opening new doors, not just for novelty, but also for more challenges with chemical interpretations. Recently, the commonly used protein- versus humic-like classifications of DOM have been ineffective at describing DOM chemistry in various systems (e.g., ice cores, wastewaters, incubations/engineered). Moreover, the oversimplification of such classifications used to describe fluorescing components, without further scrutiny, has become commonplace, ultimately producing vague reporting. For example, West Antarctic ice core DOM was shown to contain fluorescence in the low excitation/emission wavelength region, however resolved fluorophores depicting tyrosine- and tryptophan-like DOM were not observed. At first, as literature suggested, we reported this result as protein-like, and concluded that microbial contributions were dominant in deep ice. That initial interpretation would disintegrate the conservation paradigm of atmospheric composition during deposition, the crux of ice core research, and contradict other lines of evidence. This begged the question, "How can we describe DOM chemistry without distinct fluorophores?" Antarctic ice core DOM was dominated by neither tyrosine- nor tryptophan-like fluorescence, causing "unusual" looking fluorescent components. After further examination, deep ice DOM was reported to contain fluorescent species most similar to monolignols and tannin-like phenols, describing the precursors of lignin from low carbon producing environments, consistent with marine sediment records. Currently, we are working towards more detailed descriptions of fluorescence, thus accepting variation in and around protein- and humic-like regions, and achieving robust chemical interpretations of DOM chemistry, ultimately providing insight to its interwoven nature in the environment.

Effect of potential vorticity flux on the circulation in the South China Sea

NASA Astrophysics Data System (ADS)

Zhu, Yaohua; Sun, Junchuan; Wang, Yonggang; Wei, Zexun; Yang, Dezhou; Qu, Tangdong

2017-08-01

This study analyzes temperature and salinity products from the U.S. Navy Generalized Digital Environment Model. To avoid the fictitious assumption of no-motion reference level, a P-vector inverse method is employed to derive geostrophic velocity. Line integral of geostrophic velocity shows evidence for the existence of a sandwiched circulation in the South China Sea (SCS), i.e., cyclonic circulation in the subsurface and deep layers and anticyclonic in the intermediate layer. To reveal the factors responsible for the sandwiched circulation, we derive the potential vorticity equation based on a four-and-a-half-layer quasi-geostrophic model and apply theoretical potential vorticity constraint to density layers. The result shows that the sandwiched circulation is largely induced by planetary potential vorticity flux through lateral boundaries, mainly the Luzon Strait. This dynamical mechanism lies in the fact that the net potential vorticity inflow in the subsurface and deep layers leads to a positive layer-average vorticity in the SCS basin, yielding vortex stretching and a cyclonic basin-wide circulation. On the contrary, the net potential vorticity outflow in the intermediate layer induces a negative layer-average vorticity, generating an anticyclonic basin-wide circulation in the SCS. Furthermore, by illustrating different consequence from depth/density layers, we clarify that density layers are essential for applying theoretical potential vorticity constraint to the isolated deep SCS basin.

The tropical precipitation pickup threshold and clouds in a radiative convective equilibrium model: 2. Two-layer moisture

NASA Astrophysics Data System (ADS)

Igel, Matthew R.

2017-06-01

This paper complements Part 1 in which cloud processes of aggregated convection are examined in a large-domain radiative convective equilibrium simulation in order to uncover those responsible for a consistently observed, abrupt increase in mean precipitation at a column relative humidity value of approximately 77%. In Part 2, the focus is on how the transition is affected independently by total moisture above and below the base of the melting layer. When mean precipitation rates are examined as simultaneous functions of these two moisture layers, four distinct behaviors are observed. These four behaviors suggest unique, yet familiar, physical regimes in which (i) little rain is produced by infrequent clouds, (ii) shallow convection produces increasing warm rain with increasing low-level moisture, (iii) deep convection produces progressively heavier rain above the transition point with increasing total moisture, and (iv) deep stratiform cloud produces increasingly intense precipitation from melting for increasing upper level moisture. The independent thresholds separating regimes in upper and lower layer humidity are shown to result in the value of total column humidity at which a transition between clear air and deep convection, and therefore a pickup in precipitation, is possible. All four regimes force atmospheric columns toward the pickup value at 77% column humidity, but each does so through a unique set of physical processes. Layer moisture and microphysical budgets are analyzed and contrasted with column budgets.

Current status and historical trends of organochlorine pesticides in the ecosystem of Deep Bay, South China

NASA Astrophysics Data System (ADS)

Qiu, Yao-Wen; Zhang, Gan; Guo, Ling-Li; Cheng, Hai-Rong; Wang, Wen-Xiong; Li, Xiang-Dong; Wai, Onyx W. H.

2009-11-01

To characterize the current status and historical trends in organochlorine pesticides (OCPs) contamination in Deep Bay, an important water body between Hong Kong and mainland China with a Ramsar mangrove wetland (Maipo), samples from seawater, suspended particulate matter (SPM), surface sediment, sediment core and fish were collected to determine the OCPs concentrations. Sediment core dating was accomplished using the 210Pb method. The average concentrations of DDTs, HCHs and chlordanes in water were 1.96, 0.71, 0.81 ng l -1, while in SPM were 36.5, 2.5, 35.7 ng g -1 dry weight, in surface sediment were 20.2, 0.50, 2.4 ng g -1 dry weight, and in fish were 125.4, 0.43, 13.1 ng g -1 wet weight, respectively. DDTs concentrations in various matrices of Deep Bay were intermediate compared with those in other areas. Temporal trends of the targeted OCPs levels in sediment core generally increased from 1948 to 2004, with the highest levels in top or sub-surface sediment. Both DDT composition and historical trends indicated an ongoing fresh DDT input. A positive relationship between the bioconcentration factor (BCF) of target chemicals and the corresponding octanol-water partition coefficient ( Kow), and between the biota-sediment accumulation factors (BSAF) and the Kow were observed in the Bay. The risk assessment indicated that there were potential ecological and human health risks for the target OCPs in Deep Bay.

Distribution and accumulation of mercury and copper in mangrove sediments in Shenzhen, the world's most rapid urbanized city.

PubMed

Li, Ruili; Xu, Hualin; Chai, Minwei; Qiu, Guo Yu

2016-02-01

To investigate the influence of mangrove forest on heavy metal accumulation and storage in intertidal sediments, core sediments from natural mangrove, restored mangrove, and adjacent mud flat spanning the intertidal zone along the south coastline of the most heavily urbanized Deep bay, Guangdong province, China were analyzed. The average concentrations of mercury (Hg) in surface sediments of natural mangrove and restored mangrove were 172 and 151 ng g(-1), whereas those of copper (Cu) were 75 and 50 μg g(-1), respectively. Compared to those from other typical mangrove wetlands of the world, the metal levels in Shenzhen were at median to high levels, which is consistent with the fact that Shenzhen is in high exploitation and its mangrove suffer intensive impact from human activities. Hg and Cu concentration profiles indicated a higher metal accumulation in surface layers of sediments, in agreement with enrichment of organic matter contents. Maximum concentration, enrichment factors, and excess (background-deducted) concentration inventories of metals (Hg and Cu) were substantially different between environments, decreasing from natural mangrove sediments to restored mangrove sediments to mud flat. Furthermore, metal inputs to Futian mangrove decreased in the order natural mangrove > restored mangrove > mud flat, indicating that mangrove facilitated the accumulation and storage of Hg and Cu in sediment layers.

Accuracy of retrieving temperature and humidity profiles by ground-based microwave radiometry in truly complex terrain

NASA Astrophysics Data System (ADS)

Massaro, G.; Stiperski, I.; Pospichal, B.; Rotach, M. W.

2015-08-01

Within the Innsbruck Box project, a ground-based microwave radiometer (RPG-HATPRO) was operated in the Inn Valley (Austria), in very complex terrain, between September 2012 and May 2013 to obtain temperature and humidity vertical profiles of the full troposphere with a specific focus on the valley boundary layer. In order to assess its performance in a deep alpine valley, the profiles obtained by the radiometer with different retrieval algorithms based on different climatologies are compared to local radiosonde data. A retrieval that is improved with respect to the one provided by the manufacturer, based on better resolved data, shows a significantly smaller root mean square error (RMSE), both for the temperature and humidity profiles. The improvement is particularly substantial at the heights close to the mountaintop level and in the upper troposphere. Lower-level inversions, common in an alpine valley, are resolved to a satisfactory degree. On the other hand, upper-level inversions (above 1200 m) still pose a significant challenge for retrieval. For this purpose, specialized retrieval algorithms were developed by classifying the radiosonde climatologies into specialized categories according to different criteria (seasons, daytime, nighttime) and using additional regressors (e.g., measurements from mountain stations). The training and testing on the radiosonde data for these specialized categories suggests that a classification of profiles that reproduces meaningful physical characteristics can yield improved targeted specialized retrievals. A novel and very promising method of improving the profile retrieval in a mountainous region is adding further information in the retrieval, such as the surface temperature at fixed levels along a topographic slope or from nearby mountaintops.

Gravitational evidence for an undifferentiated Callisto.

PubMed

Anderson, J D; Lau, E L; Sjogren, W L; Schubert, G; Moore, W B

1997-05-15

Before the arrival of the Galileo spacecraft at Jupiter, models for the interior structure of the four galilean satellites--Io, Europa, Ganymede and Callisto-ranged from uniform mixtures of rock and ice (that is, undifferentiated objects) or rocky cores surrounded by a mantle of water ice. Now it appears that Io has a large metallic core and that Ganymede is strongly differentiated, most probably into a three-layer structure consisting of a metallic core, a silicate mantle and a deep outer layer of ice. Direct information on the interior structure of Callisto determined from previous spacecraft fly-bys was essentially limited to an estimate of the mean density being intermediate between pure ice and pure rock. Here we report measurements of Callisto's gravitational field which reveal that, in contrast to Io and Ganymede, this galilean satellite is most probably a homogeneous object consisting of a solar mixture of 40% compressed ice and 60% rock (including iron and iron sulphide). Callisto's undifferentiated state is consistent with the apparent lack of an intrinsic magnetic field, and indicates that the outermost galilean satellite has not experienced a heating phase sufficiently high to separate its rock and metal components from the lighter ices.

[Relationship Between Core Convective Structure and Intensity Change in Tropical Cyclones]. [Structure of the HighIy Sheared Tropical Stom Chantal During CAMEX-4

NASA Technical Reports Server (NTRS)

2004-01-01

Tropical Storm Chantal during August 2001 was a storm that failed to intensify over the few days prior to making landfall on the Yucatan Peninsula. An observational study of Tropical Storm Chantal is presented using a diverse data set including remote and in situ measurements from the NASA ER-2 and DC-8 and the NOAA WP-3D N42RF aircraft and satellite data. The authors discuss the storm structure from the larger scale environment down to the convective scale. Large vertical shear (850-200 hPa shear magnitude range 8-15 m/s) plays a very important role in preventing Chantal from intensifying. The storm had a poorly defined vortex that only extended up to 5-6 km altitude, and an adjacent intense convective region that comprised an Mesoscale Convective System (MCS). The entire low-level circulation center was in the rain-free western side of the storm, about 80 km to the west-southwest of the MCS. The MCS appears to have been primarily the result of intense convergence between large scale, low-level easterly flow with embedded downdrafts, and the cyclonic vortex flow. The individual cells in the MCS such as Cell 2 during the period of the observations, were extremely intense with reflectivity core diameters of 10 km and peak updrafts exceeding 20 m/s. Associated with this MCS were two broad subsidence (warm) regions both of which had portions over the vortex. The first layer near 700 hPa was directly above the vortex and covered most of it. The second layer near 500 hPa was along the forward and right flanks of Cell 2 and undercut the anvil divergence region above. There was not much resemblance of these subsidence layers to typical upper level warm cores in hurricanes that are necessary to support strong surface winds and a low central pressure. The observations are compared to previous studies of weakly sheared storms and modeling studies of shear effects and intensification. The configuration of the convective updrafts, low-level circulation, and lack of vertical coherence between the upper and low level warming regions, likely inhibited intensification of Chantal. This configuration is consistent with modeling of vortices in sheared environments, which suggest strongest convection and rain in the downshear left quadrant of the storm, and subsidence in the upshear right quadrant. The vertical shear profile is however different from what was assumed in previous modeling in that the winds are strongest in the lowest levels and the deep tropospheric vertical shear is on the order of 10-12 m/s.

Very Deep inside the SN 1987A Core Ejecta: Molecular Structures Seen in 3D

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abellán, F. J.; Marcaide, J. M.; Indebetouw, R.

2017-06-20

Most massive stars end their lives in core-collapse supernova explosions and enrich the interstellar medium with explosively nucleosynthesized elements. Following core collapse, the explosion is subject to instabilities as the shock propagates outward through the progenitor star. Observations of the composition and structure of the innermost regions of a core-collapse supernova provide a direct probe of the instabilities and nucleosynthetic products. SN 1987A in the Large Magellanic Cloud is one of very few supernovae for which the inner ejecta can be spatially resolved but are not yet strongly affected by interaction with the surroundings. Our observations of SN 1987A withmore » the Atacama Large Millimeter/submillimeter Array are of the highest resolution to date and reveal the detailed morphology of cold molecular gas in the innermost regions of the remnant. The 3D distributions of carbon and silicon monoxide (CO and SiO) emission differ, but both have a central deficit, or torus-like distribution, possibly a result of radioactive heating during the first weeks (“nickel heating”). The size scales of the clumpy distribution are compared quantitatively to models, demonstrating how progenitor and explosion physics can be constrained.« less

The critical role of fossils in inferring deep-node phylogenetic relationships and macroevolutionary patterns in Cornales.

PubMed

Atkinson, Brian A

2018-05-24

The basal asterid order, Cornales, experienced a rapid radiation during the Cretaceous, which has made it difficult to elucidate the early evolution of the order using extant taxa only. Recent paleobotanical studies, however, have begun to shed light on the early diversification of Cornales. Herein, fossils are directly incorporated in phylogenetic and quantitative morphological analyses to reconstruct early cornalean evolution. A morphological matrix of 77 fruit characters and 58 taxa (24 extinct) was assembled. Parsimony analyses including and excluding fossils were conducted. A fossil inclusive tree was time-scaled to visualize the timing of the initial cornalean radiation. Disparity analyses were utilized to infer the morphological evolution of cornaleans with drupaceous fruits. Fossil inclusive and exclusive parsimony analyses resulted in well-resolved deep-node relationships within Cornales. Resolution in the fossil inclusive analysis is substantially higher, revealing a basal grade including Loasaceae, Hydrangeaceae, Hydrostachyaceae, Grubbiaceae, a Hironoia+Amersinia clade, and Curtisiaceae, respectively, that leads to a "core" group containing a clade comprising a Cretaceous grade leading to clade of Nyssaceae, Mastixiaceae, and Davidiaceae that is sister to a Cornaceae+Alangiaceae clade. The time-scaled tree indicates that the initial cornalean diversification occurred before 89.8 Ma. Disparity analyses suggest the morphological diversity of Cornales peaked during the Paleogene. Phylogenetic analyses clearly demonstrate that novel character mosaics of Cretaceous cornaleans play a critical role in resolving deep-node relationships within Cornales. The post-Cretaceous increase of cornalean disparity is associated with a shift in morphospace occupation, which can be explained from ecological and developmental perspectives. © 2018 Botanical Society of America.

A snow pack source of aldehydes and acetone in West Antarctica between 76 and 90 degrees S

NASA Astrophysics Data System (ADS)

Frey, M. M.; Bales, R. C.; Belle-Oudry, D.

2009-04-01

The investigation of snow-atmosphere exchange of many chemical species driven by physical and photochemical processes is key for understanding atmospheric chemistry above snow covered regions and has important implications for ice core interpretation. A number of recent field and modeling studies indicates that a source of aldehydes and ketones exists in polar snowpacks, and the emission of these species may significantly impact organic and HO2 radical levels in the overlying boundary layer. However, most of the studies took place in the northern hemisphere and only few data are available from Antarctica. Here we present new measurements from the US International Trans-Antarctic Scientific Expedition (ITASE) carried out in summers of 2000-2003. 1-2 day average mixing ratios of formaldehyde (CH2O), acetaldehyde (CH3CHO) and acetone (CH3COCH3) were determined in ambient and firn air across the West Antarctic Ice Sheet (WAIS) between 76 °S and 90 °S. Organic chemical species were collected on 2,4-Dinitrophenylhydrazine (DNPH) filter cartridges and analyzed after elution using HPLC. Median (range) ambient levels of CH2O, CH3CHO and CH3COCH3 were 65 (15-205) pptv, 35 (10-195) pptv and 65 (25-150) pptv, respectively. Firn air concentrations of CH2O and CH3CHO were increased up to 15fold compared to ambient air, suggesting significant emission fluxes, while CH3COCH3 gradients between the air above and below the snow surface were less pronounced.. We discuss implications for the oxidation capacity of the WAIS boundary layer and for the interpretation of ongoing surface studies at the WAIS Divide deep coring site.

Development and application of deep convolutional neural network in target detection

NASA Astrophysics Data System (ADS)

Jiang, Xiaowei; Wang, Chunping; Fu, Qiang

2018-04-01

With the development of big data and algorithms, deep convolution neural networks with more hidden layers have more powerful feature learning and feature expression ability than traditional machine learning methods, making artificial intelligence surpass human level in many fields. This paper first reviews the development and application of deep convolutional neural networks in the field of object detection in recent years, then briefly summarizes and ponders some existing problems in the current research, and the future development of deep convolutional neural network is prospected.

Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat.

PubMed

Borrel, Guillaume; Colombet, Jonathan; Robin, Agnès; Lehours, Anne-Catherine; Prangishvili, David; Sime-Ngando, Télesphore

2012-11-01

Morphological diversity, abundance and community structure of viruses were examined in the deep and anoxic sediments of the volcanic Lake Pavin (France). The sediment core, encompassing 130 years of sedimentation, was subsampled every centimeter. High viral abundances were recorded and correlated to prokaryotic densities. Abundances of viruses and prokaryotes decreased with the depth, contrasting the pattern of virus-to-prokaryote ratio. According to fingerprint analyses, the community structure of viruses, bacteria and archaea gradually changed, and communities of the surface (0-10 cm) could be discriminated from those of the intermediate (11-27 cm) and deep (28-40 cm) sediment layers. Viral morphotypes similar to virions of ubiquitous dsDNA viruses of bacteria were observed. Exceptional morphotypes, previously never reported in freshwater systems, were also detected. Some of these resembled dsDNA viruses of hyperthermophilic and hyperhalophilic archaea. Moreover, unusual types of spherical and cubic virus-like particles (VLPs) were observed. Infected prokaryotic cells were detected in the whole sediment core, and their vertical distribution correlated with both viral and prokaryotic abundances. Pleomorphic ellipsoid VLPs were visible in filamentous cells tentatively identified as representatives of the archaeal genus Methanosaeta, a major group of methane producers on earth.

Unexpected and novel putative viruses in the sediments of a deep-dark permanently anoxic freshwater habitat

PubMed Central

Borrel, Guillaume; Colombet, Jonathan; Robin, Agnès; Lehours, Anne-Catherine; Prangishvili, David; Sime-Ngando, Télesphore

2012-01-01

Morphological diversity, abundance and community structure of viruses were examined in the deep and anoxic sediments of the volcanic Lake Pavin (France). The sediment core, encompassing 130 years of sedimentation, was subsampled every centimeter. High viral abundances were recorded and correlated to prokaryotic densities. Abundances of viruses and prokaryotes decreased with the depth, contrasting the pattern of virus-to-prokaryote ratio. According to fingerprint analyses, the community structure of viruses, bacteria and archaea gradually changed, and communities of the surface (0–10 cm) could be discriminated from those of the intermediate (11–27 cm) and deep (28–40 cm) sediment layers. Viral morphotypes similar to virions of ubiquitous dsDNA viruses of bacteria were observed. Exceptional morphotypes, previously never reported in freshwater systems, were also detected. Some of these resembled dsDNA viruses of hyperthermophilic and hyperhalophilic archaea. Moreover, unusual types of spherical and cubic virus-like particles (VLPs) were observed. Infected prokaryotic cells were detected in the whole sediment core, and their vertical distribution correlated with both viral and prokaryotic abundances. Pleomorphic ellipsoid VLPs were visible in filamentous cells tentatively identified as representatives of the archaeal genus Methanosaeta, a major group of methane producers on earth. PMID:22648129

Fronts and frontogenesis as revealed by high time resolution data

NASA Technical Reports Server (NTRS)

Frank, A. E.; Barber, D. A.

1977-01-01

Upper air sounding are used to examine a cold front of average intensity. Vertical cross sections of potential temperature and wind, and horizontal analyses were compared and adjusted for consistency. These analyses were then used to study the evolution of the front, found to consist of a complex system of fronts occurring at all levels of the troposphere. Low level fronts were strongest at the surface and rapidly weakened with height. Fronts in the midddle troposphere were much more intense. The warm air ahead of the fronts was nearly barotropic, while the cold air behind was baroclinic through deep layers. A deep mixed layer was observed to grow in this cold air.

Measurement system to determine the total and angle-resolved light scattering of optical components in the deep-ultraviolet and vacuum-ultraviolet spectral regions

NASA Astrophysics Data System (ADS)

Schröder, Sven; Gliech, Stefan; Duparré, Angela

2005-10-01

An instrumentation for total and angle-resolved scattering (ARS) at 193 and 157 nm has been developed at the Fraunhofer Institute in Jena to meet the severe requirements for scattering analysis of deep- and vacuum-ultraviolet optical components. Extremely low backscattering levels of 10^-6 for the total scattering measurements and more than 9 orders of magnitude dynamic range for ARS have been accomplished. Examples of application extend from the control of at-wavelength scattering losses of superpolished substrates with rms roughness as small as 0.1 nm to the detection of volume material scattering and the study into the scattering of multilayer coatings. In addition, software programs were developed to model the roughness-induced light scattering of substrates and thin-film coatings.

Coherent response of Antarctic Intermediate Water and Atlantic Meridional Overturning Circulation during the last deglaciation: reconciling contrasting neodymium isotope reconstructions in tropical Atlantic

NASA Astrophysics Data System (ADS)

Gu, S.; Liu, Z.; Zhang, J.; Rempfer, J.; Joos, F.; Oppo, D.

2017-12-01

Antarctic Intermediate Water (AAIW) plays important roles in the global climate system and the global ocean nutrient and carbon cycles. However, it is unclear how AAIW responds to global climate changes. In particular, neodymium isotopic composition (ɛNd) reconstructions from different locations in tropical Atlantic, have led to a debate on the relationship between the northward penetration of AAIW into the tropical Atlantic and Atlantic Meridional Overturning Circulation (AMOC) variability during the last deglaciation. We resolve this controversy by studying the transient oceanic evolution during the last deglaciation using a neodymium-enabled ocean model. Our results suggest a coherent response of AAIW and AMOC: when AMOC weakens, the northward penetration and transport of AAIW decreases while its depth and thickness increase. Our study highlights that as part of the return flow of the North Atlantic Deep Water (NADW), the northward penetration of AAIW in Atlantic is determined predominately by AMOC intensity. Moreover, the inconsistency among different tropical Atlantic ɛNd reconstructions is reconciled by considering their corresponding core locations and depths, which were influenced by different water masses and ocean currents in the past. The very radiogenic water from the bottom of the Gulf of Mexico and Caribbean Sea, which was previously overlooked in interpretations of deglacial ɛNd variability, can be transported to shallow layers during active AMOC, and modulates ɛNd in the tropical Atlantic. Changes in the AAIW core depth must also be considered. Thus, interpretation of ɛNd reconstructions from the tropical Atlantic is more complicated than suggested in previous studies. ­­

Holocene flood stack from three Eifel maar lakes

NASA Astrophysics Data System (ADS)

Brunck, Heiko; Sirocko, Frank

2015-04-01

Lacustrine sediments are very sensitive to natural and anthropogenically enviromental changes. Thus, lake sediments are excellent climate archives and can be used for reconstructions of past precipitation and flood events. However, we extend our flood record for MIS 2/3 to the entire Holocene up to recent years to get a complete flood stack for the last 60 000 years. The present study reconstructs paleo floods from event layers in the sediment, of Schalkenmehren Maar (SM3), Ulmen Maar (UM1) and Holzmaar (HM1) combined with recent gauge time-series. All three maar lakes has an inflow by a local stream. Accordingly the sedimentation rate is directly linked to runoff activity and the bioturbation was low so that event layers become visible, but varves are only preserved in lake Holzmaar. The maar sites are situated in the Eifel near to the town of Daun and were drilled in the ELSA (Eifel Laminated Sediment archive) project. The Eifel area is well suited to approximate Central European weather, because modern water level gauge data from Eifel rivers correlate with respective data from the Rhine (Wernli and Pfahl, 2009). Combined sedimentological, paleobotanical and geochemical data received from SM3, UM1 and HM1 builds the foundation of the 14C based chronology. The synchronisation of the record is controlled by tephra time markers and pollen. Both are used to align the main cores of the ELSA project and construct an integrated age model for the last 220 000 years [b2k] (Förster and Sirocko, 2014). For the extension of our MIS 2/3 flood stack we used the Laacher See Tephra (10 900 BC) as marker for the correlation with the Holocene cores. To study the flood events in detail, 10 cm long thin sections were used to distinguish flood layers from distal turbidites. Turbidites have a continuous grain size gradation; the grains size profile of flood events is in contrast characterized by several grain size maxima over the entire layer thickness. A flood event over several days shows numerous peaks of intense discharge, which lead to a discontinuous grain size gradient. The thickness of each flood layer was measured for the classification of the event intensity. As a consequence, 118 flood layers over 7.5 mm thickness were detected in all 3 cores. Flood layers in the interval 10 900 BC up to 4000 BC are not as clearly visible in Holzmaar or Schalkenmehrener Maar as during the later Holocene (when humans cultivated the landscape) but visible flood layers are regularly observed in the record from Ulmen. The Flood layers from 4000 BC up to now are most common in the medieval and Roman sections of the cores; the major events have occurred at 1342 AD, 800 BC and 2100 BC. Our time-series represents the first highly-resolved chronology for flood events from 60 000 years until present times and indicates variable periodicities of flood activity linked to predominant climatic and anthropogenic development.

CRUSTAL FAILURE DURING BINARY INSPIRAL

DOE Office of Scientific and Technical Information (OSTI.GOV)

Penner, A. J.; Andersson, N.; Jones, D. I.

2012-04-20

We present the first fully relativistic calculations of the crustal strain induced in a neutron star by a binary companion at the late stages of inspiral, employing realistic equations of state for the fluid core and the solid crust. We show that while the deep crust is likely to fail only shortly before coalescence, there is a large variation in elastic strain, with the outermost layers failing relatively early on in the inspiral. We discuss the significance of the results for both electromagnetic and gravitational-wave astronomy.

The treatment of mixing in core helium-burning models - III. Suppressing core breathing pulses with a new constraint on overshoot

NASA Astrophysics Data System (ADS)

Constantino, Thomas; Campbell, Simon W.; Lattanzio, John C.

2017-12-01

Theoretical predictions for the core helium burning phase of stellar evolution are highly sensitive to the uncertain treatment of mixing at convective boundaries. In the last few years, interest in constraining the uncertain structure of their deep interiors has been renewed by insights from asteroseismology. Recently, Spruit proposed a limit for the rate of growth of helium-burning convective cores based on the higher buoyancy of material ingested from outside the convective core. In this paper we test the implications of such a limit for stellar models with a range of initial mass and metallicity. We find that the constraint on mixing beyond the Schwarzschild boundary has a significant effect on the evolution late in core helium burning, when core breathing pulses occur and the ingestion rate of helium is fastest. Ordinarily, core breathing pulses prolong the core helium burning lifetime to such an extent that models are at odds with observations of globular cluster populations. Across a wide range of initial stellar masses (0.83 ≤ M/M⊙ ≤ 5), applying the Spruit constraint reduces the core helium burning lifetime because core breathing pulses are either avoided or their number and severity reduced. The constraint suggested by Spruit therefore helps to resolve significant discrepancies between observations and theoretical predictions. Specifically, we find improved agreement for R2 (the observed ratio of asymptotic giant branch to horizontal branch stars in globular clusters), the luminosity difference between these two groups, and in asteroseismology, the mixed-mode period spacing detected in red clump stars in the Kepler field.

Final Technical Report for "High-resolution global modeling of the effects of subgrid-scale clouds and turbulence on precipitating cloud systems"

DOE Office of Scientific and Technical Information (OSTI.GOV)

Larson, Vincent

2016-11-25

The Multiscale Modeling Framework (MMF) embeds a cloud-resolving model in each grid column of a General Circulation Model (GCM). A MMF model does not need to use a deep convective parameterization, and thereby dispenses with the uncertainties in such parameterizations. However, MMF models grossly under-resolve shallow boundary-layer clouds, and hence those clouds may still benefit from parameterization. In this grant, we successfully created a climate model that embeds a cloud parameterization (“CLUBB”) within a MMF model. This involved interfacing CLUBB’s clouds with microphysics and reducing computational cost. We have evaluated the resulting simulated clouds and precipitation with satellite observations. Themore » chief benefit of the project is to provide a MMF model that has an improved representation of clouds and that provides improved simulations of precipitation.« less

The Analytic Onion: Examining Training Issues from Different Levels of Analysis. Interim Technical Paper for Period July 1989-June 1991.

ERIC Educational Resources Information Center

Lamb, Theodore A.; Chin, Keric B. O.

This paper proposes a conceptual framework based on different levels of analysis using the metaphor of the layers of an onion to help organize and structure thinking on research issues concerning training. It discusses the core of the "analytic onion," the biological level, and seven levels of analysis that surround that core: the individual, the…

Radial-vertical profiles of tropical cyclone derived from dropsondes

NASA Astrophysics Data System (ADS)

Ren, Yifang

The scopes of this thesis research are two folds: the first one is to the construct the intensity-based composite radial-vertical profiles of tropical cyclones (TC) using GPS-based dropsonde observations and the second one is to identify the major deficiencies of Mathur vortices against the dropsonde composites of TCs. The intensity-based dropsonde composites of TCs advances our understanding of the dynamic and thermal structure of TCs of different intensity along the radial direction in and above the boundary layer where lies the devastating high wind that causes property damages and storm surges. The identification of the major deficiencies of Mathur vortices in representing the radial-vertical profiles of TC of different intensity helps to improve numerical predictions of TCs since most operational TC forecast models need to utilize bogus vortices, such as Mathur vortices, to initialize TC forecasts and simulations. We first screen all available GPS dropsonde data within and round 35 named TCs over the tropical Atlantic basin from 1996 to 2010 and pair them with TC parameters derived from the best-track data provided by the National Hurricane Center (NHC) and select 1149 dropsondes that have continuous coverage in the lower troposphere. The composite radial-vertical profiles of tangential wind speed, temperature, mixing ratio and humidity are based for each TC category ranging from "Tropical Storm" (TS) to "Hurricane Category 1" (H1) through "Hurricane Category 5" (H5). The key findings of the dropsonde composites are: (i) all TCs have the maximum tangential wind within 1 km above the ground and a distance of 1-2 times of the radius of maximum wind (RMW) at the surface; (ii) all TCs have a cold ring surrounding the warm core near the boundary layer at a distance of 1-3 times of the RMW and the cold ring structure gradually diminishes at a higher elevation where the warm core structure prevails along the radial direction; (iii) the existence of such shallow cold ring outside the RMW explains why the maximum tangential wind is within 1 km above the ground and is outside the RMW, as required by the hydrostatic and gradient wind balance relations; (iv) one of the main differences among TCs of different intensity, besides the speed of the maximum tangential wind, is the vertical extent of near-saturated moisture air layer inside the core. A weaker TC tends to have a deep layer of the near-saturated moisture air layer whereas a stronger TC has a shallow one; (v) another main difference in the thermal structure among TCs of different intensity is the intensity and vertical extent of the warm core extending from the upper layer to the lower layer. In general, a stronger TC has a stronger warm core extending downward further into lower layer and vice versa. The features (iv) and (v) are consistent with the fact that a stronger TC tends to have stronger descending motion inside the core. The main deficiencies of Mathur vortices in representing the radial-vertical profiles of TC of different intensity are (i) Mathur vortices of all categories have the maximum wind at the surface; (ii) none of Mathur vortices have a cold ring outside the warm core near the boundary layer; (iii) Mathur vortices tend to overestimate warm core structure in reference to the horizontal mean temperature profile; (iv) Mathur vortices tend to overestimate the vertical depth of the near-saturated air layer near the boundary layer.

Deep-Sea Microbes: Linking Biogeochemical Rates to -Omics Approaches

NASA Astrophysics Data System (ADS)

Herndl, G. J.; Sintes, E.; Bayer, B.; Bergauer, K.; Amano, C.; Hansman, R.; Garcia, J.; Reinthaler, T.

2016-02-01

Over the past decade substantial progress has been made in determining deep ocean microbial activity and resolving some of the enigmas in understanding the deep ocean carbon flux. Also, metagenomics approaches have shed light onto the dark ocean's microbes but linking -omics approaches to biogeochemical rate measurements are generally rare in microbial oceanography and even more so for the deep ocean. In this presentation, we will show by combining metagenomics, -proteomics and biogeochemical rate measurements on the bulk and single-cell level that deep-sea microbes exhibit characteristics of generalists with a large genome repertoire, versatile in utilizing substrate as revealed by metaproteomics. This is in striking contrast with the apparently rather uniform dissolved organic matter pool in the deep ocean. Combining the different -omics approaches with metabolic rate measurements, we will highlight some major inconsistencies and enigmas in our understanding of the carbon cycling and microbial food web structure in the dark ocean.

Analysis of Deep and Shallow Traps in Semi-Insulating CdZnTe

DOE PAGES

Kim, Kihyun; Yoon, Yongsu; James, Ralph B.

2018-03-13

Trap levels which are deep or shallow play an important role in the electrical and the optical properties of a semiconductor; thus, a trap level analysis is very important in most semiconductor devices. Deep-level defects in CdZnTe are essential in Fermi level pinning at the middle of the bandgap and are responsible for incomplete charge collection and polarization effects. However, a deep level analysis in semi-insulating CdZnTe (CZT) is very difficult. Theoretical capacitance calculation for a metal/insulator/CZT (MIS) device with deep-level defects exhibits inflection points when the donor/acceptor level crosses the Fermi level in the surface-charge layer (SCL). Three CZTmore » samples with different resistivities, 2 × 10 4 (n-type), 2 × 10 6 (p-type), and 2 × 10 10 (p-type) Ω·cm, were used in fabricating the MIS devices. These devices showed several peaks in their capacitance measurements due to upward/downward band bending that depend on the surface potential. In conclusion, theoretical and experimental capacitance measurements were in agreement, except in the fully compensated case.« less

Analysis of Deep and Shallow Traps in Semi-Insulating CdZnTe

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Kihyun; Yoon, Yongsu; James, Ralph B.

Trap levels which are deep or shallow play an important role in the electrical and the optical properties of a semiconductor; thus, a trap level analysis is very important in most semiconductor devices. Deep-level defects in CdZnTe are essential in Fermi level pinning at the middle of the bandgap and are responsible for incomplete charge collection and polarization effects. However, a deep level analysis in semi-insulating CdZnTe (CZT) is very difficult. Theoretical capacitance calculation for a metal/insulator/CZT (MIS) device with deep-level defects exhibits inflection points when the donor/acceptor level crosses the Fermi level in the surface-charge layer (SCL). Three CZTmore » samples with different resistivities, 2 × 10 4 (n-type), 2 × 10 6 (p-type), and 2 × 10 10 (p-type) Ω·cm, were used in fabricating the MIS devices. These devices showed several peaks in their capacitance measurements due to upward/downward band bending that depend on the surface potential. In conclusion, theoretical and experimental capacitance measurements were in agreement, except in the fully compensated case.« less

Defects and annealing studies in 1-Me electron irradiated (AlGa)As-GaAs solar cells

NASA Technical Reports Server (NTRS)

Li, S. S.; Wang, W. L.; Loo, R. Y.; Rahilly, W. P.

1982-01-01

The deep-level defects and recombination mechanisms in the one-MeV electron irradiated (AlGa)As-GaAs solar cells under various irradiation and annealing conditions are discussed. Deep-level transient spectroscopy (DLTS) and capacitance-voltage (CV) techniques were used to determine the defect and recombination parameters such as energy levels and defect density, carrier capture cross sections and lifetimes for both electron and hole traps as well as hole diffusion lengths in these electron irradiated GaAs solar cells. GaAs solar cells used in this study were prepared by the infinite solution melt liquid phase epitaxial (LPE) technique at Hughes Research Lab., with (Al0.9Ga0.1)-As window layer, Be-diffused p-GaAs layer on Sn-doped n-GaAs or undoped n-GaAs active layer grown on n(+)-GaAs substrate. Mesa structure with area of 5.86x1000 sq cm was fabricated. Three different irradiation and annealing experiments were performed on these solar cells.

Sensitivity of Tropical Cyclones to Parameterized Convection in the NASA GEOS5 Model

NASA Technical Reports Server (NTRS)

Lim, Young-Kwon; Schubert, Siegfried D.; Reale, Oreste; Lee, Myong-In; Molod, Andrea M.; Suarez, Max J.

2014-01-01

The sensitivity of tropical cyclones (TCs) to changes in parameterized convection is investigated to improve the simulation of TCs in the North Atlantic. Specifically, the impact of reducing the influence of the Relaxed Arakawa-Schubert (RAS) scheme-based parameterized convection is explored using the Goddard Earth Observing System version5 (GEOS5) model at 0.25 horizontal resolution. The years 2005 and 2006 characterized by very active and inactive hurricane seasons, respectively, are selected for simulation. A reduction in parameterized deep convection results in an increase in TC activity (e.g., TC number and longer life cycle) to more realistic levels compared to the baseline control configuration. The vertical and horizontal structure of the strongest simulated hurricane shows the maximum lower-level (850-950hPa) wind speed greater than 60 ms and the minimum sea level pressure reaching 940mb, corresponding to a category 4 hurricane - a category never achieved by the control configuration. The radius of the maximum wind of 50km, the location of the warm core exceeding 10 C, and the horizontal compactness of the hurricane center are all quite realistic without any negatively affecting the atmospheric mean state. This study reveals that an increase in the threshold of minimum entrainment suppresses parameterized deep convection by entraining more dry air into the typical plume. This leads to cooling and drying at the mid- to upper-troposphere, along with the positive latent heat flux and moistening in the lower-troposphere. The resulting increase in conditional instability provides an environment that is more conducive to TC vortex development and upward moisture flux convergence by dynamically resolved moist convection, thereby increasing TC activity.

Chemistry of microparticles trapped in last glacial period ice of EPICA-DML deep ice core

NASA Astrophysics Data System (ADS)

Nedelcu, Aneta F.; Faria, Sérgio H.; Kipfstuhl, Sepp; Kuhs, Werner F.

2010-05-01

The EDML ice core, drilled within the framework of the European project for Ice Coring in Antarctica, (EPICA), in the interior of Dronning Maud Land, DML, Antarctica (at 75°S, 0°E), is the first deep ice core in the Atlantic sector of the Southern Ocean region that provides higher-resolution atmosphere and climate records for the last glacial period, when compared with other ice cores retrieved from the East Antarctic plateau [1]. The chemical impurities embedded in the ice matrix of an ice sheet are basic proxies for climate reconstruction, and their concentration and composition usually determine the occurrence of distinct (cloudy or clear) strata in the ice sheet structure. The easiest observable impurities in polar ice are air bubbles. But a considerable amount of the impurities trapped inside ice layers are observed as microscopic deposits of solid (soluble or insoluble) particles, not bigger than a few micra in size, called microinclusions. Layers of ice with a high content of (micro)inclusions are in general called cloudy bands and are considered to have been formed from the precipitations deposited during colder periods. Roughly, we expect that the colder the climate during the time the snow accumulated, the cloudier the ice stratum that forms afterwards [2]. Mainly by means of in-situ micro-Raman spectroscopy, it has been shown that in Antarctic glacial ice the soluble microinclusions occur mostly as sulphate and nitrate salts [3], while in Arctic ice more commonly as carbonate salts [4]. These findings could be explained in terms of different aerosol compositions determined by the specific regional environments and climatic conditions [5]. Regarding the insoluble particles that might exist in natural ice, with higher frequency in ice layers formed during glacial type stages, the general findings classify them in the (alumino)silicate mineralogical class [6]. Microinclusions existent in solid samples taken from clear and cloudy ice layers, corresponding to the Marine Isotope Stage 2 of the EDML deep ice core, were subjected to in-situ Raman scattering measurements. The overall results [7] resemble the observations [8] that a high content of sulphate anions could characterize the chemical composition of the aerosols arriving at the EDML ice core drilling site. Many microparticles provided a Raman signal different from what would be expected if only simple compounds were forming them (and dissimilar with those in [3]). For example, it resulted that in the same microinclusion nonequivalent sulphate groups are present (20% of all), or that sulphate and silicate anions coexist (10% of all). On the one hand, this can be explained by a simple post-depositional aggregation of very small inclusions of simple sulphate salts into microclusters. On the other hand the results might be interpreted in terms of aerosol chemistry, when a mixture of sulphate salts could have been already formed prior to deposition. This work will offer answers for questions related with the existence of a post-depositional alteration of the initial impurities deposited in the LGP ice at the EDML ice core drilling site. [1] EPICA community members (2006). One-to-one coupling of glacial climate variability in Greenland and Antarctica, Nature, 444, 195-198. [2] Faria, S.H., Freitag, J., Kipfstuhl, S. (2010) Polar ice structure and the integrity of ice-core paleoclimate records, Quaternary Sci. Rev., 29, 1-2, 338-351. [3] Ohno H., M. Igarashi, T. Hondoh. 2005. Salt inclusions in polar ice core: Location and chemical form of water-soluble impurities, Earth Planet.Sci. Lett., 232, 171-178. [4] Sakurai T., Iizuka Y., Horikawa S., Johnsen S., Dahl-Jensen D., Steffensen J.P., Hondoh T. (2009). Direct observation of salts as micro-inclusions in the Greenland GRIP ice core. J. Glaciol., 55, 193, 777-783. [5] Iizuka Y., Horikawa S., Sakurai T., Johnson S, Dahl-Jensen D., Steffensen J.P., Hondoh T. (2008). A relationship between ion balance and the chemical compounds of salt inclusions found in the Greenland Ice Core Project and Dome Fuji ice cores. J. Geophys. Res., 113, D7, D07303. [6] Iizuka, Y., Miyake T., Hirabayashi M., Suzuki T., Matoba S., Motoyama H., Fujii Y., Hondoh T. (2009). Constituent elements of insoluble and non-volatile particles during the Last Glacial Maximum exhibited in the Dome Fuji (Antarctica) ice core. J. Glaciol., 55, 191, 552-562. [7] Nedelcu A.F., Kipfstuhl S., Faria S.H., Kuhs W.F. Microinclusions in clear and cloudy (MIS2) EDML ice revealed by Raman spectroscopy. In preparation for J. Glaciol. [8] Weller R., Wagenbach D. (2007) Year-round chemical aerosol records in continental Antarctica obtained by automatic samplings. Tellus 59, 755-765.

A Satellite-Based Lagrangian View on Phytoplankton Dynamics

NASA Astrophysics Data System (ADS)

Lehahn, Yoav; d'Ovidio, Francesco; Koren, Ilan

2018-01-01

The well-lit upper layer of the open ocean is a dynamical environment that hosts approximately half of global primary production. In the remote parts of this environment, distant from the coast and from the seabed, there is no obvious spatially fixed reference frame for describing the dynamics of the microscopic drifting organisms responsible for this immense production of organic matter—the phytoplankton. Thus, a natural perspective for studying phytoplankton dynamics is to follow the trajectories of water parcels in which the organisms are embedded. With the advent of satellite oceanography, this Lagrangian perspective has provided valuable information on different aspects of phytoplankton dynamics, including bloom initiation and termination, spatial distribution patterns, biodiversity, export of carbon to the deep ocean, and, more recently, bottom-up mechanisms that affect the distribution and behavior of higher-trophic-level organisms. Upcoming submesoscale-resolving satellite observations and swarms of autonomous platforms open the way to the integration of vertical dynamics into the Lagrangian view of phytoplankton dynamics.

A Satellite-Based Lagrangian View on Phytoplankton Dynamics.

PubMed

Lehahn, Yoav; d'Ovidio, Francesco; Koren, Ilan

2018-01-03

The well-lit upper layer of the open ocean is a dynamical environment that hosts approximately half of global primary production. In the remote parts of this environment, distant from the coast and from the seabed, there is no obvious spatially fixed reference frame for describing the dynamics of the microscopic drifting organisms responsible for this immense production of organic matter-the phytoplankton. Thus, a natural perspective for studying phytoplankton dynamics is to follow the trajectories of water parcels in which the organisms are embedded. With the advent of satellite oceanography, this Lagrangian perspective has provided valuable information on different aspects of phytoplankton dynamics, including bloom initiation and termination, spatial distribution patterns, biodiversity, export of carbon to the deep ocean, and, more recently, bottom-up mechanisms that affect the distribution and behavior of higher-trophic-level organisms. Upcoming submesoscale-resolving satellite observations and swarms of autonomous platforms open the way to the integration of vertical dynamics into the Lagrangian view of phytoplankton dynamics.

A coupled physical-biological pelagic model of a shallow sill fjord

NASA Astrophysics Data System (ADS)

Aksnes, Dag L.; Lie, Ulf

1990-10-01

A vertically resolved model for the land-locked fjord Lindåspollene, western Norway is presented. Salinity, temperature, oxygen, nitrogen-nutrients, silicate, and two groups of phytoplankton and herbivores are represented as dynamic variables. From 'below' the model is driven by solar radiation, precipitation, wind and tidal exchange and from 'above' by herbivore mortality. Simulation results are presented and discussed together with actual observations from Lindåspollene. The main seasonal and vertical characteristics of the phytoplankton and herbivore dynamics seem to be well reflected by the model, and realistic seasonal patterns may be produced for several successive years. The most characteristic vertical features are the formation of a summer surface production maximum and a deep chlorophyll maximum. Furthermore, a herbivore biomass which develops in the surface layer divides into a shallow and a deep component during summer and becomes concentrated in the surface layer again in the autumn. The nutricline and the pycnocline develop independently of one another, with consequences for the supply of nutrients to the upper euphotic zone. The bottom-up control exerted by the meteorological forcing, especially the freshwater runoff, seems to be of paramount significance for the observed vertical structure and seasonality of the present fjord system.

Hard X-ray photoemission study of the Fabre salts (TMTTF)2X (X = SbF6 and PF6)

NASA Astrophysics Data System (ADS)

Medjanik, Katerina; de Souza, Mariano; Kutnyakhov, Dmytro; Gloskovskii, Andrei; Müller, Jens; Lang, Michael; Pouget, Jean-Paul; Foury-Leylekian, Pascale; Moradpour, Alec; Elmers, Hans-Joachim; Schönhense, Gerd

2014-11-01

Core-level photoemission spectra of the Fabre salts with X = SbF6 and PF6 were taken using hard X-rays from PETRA III, Hamburg. In these salts TMTTF layers show a significant stack dimerization with a charge transfer of 1 e per dimer to the anion SbF6 or PF6. At room temperature and slightly below the core-level spectra exhibit single lines, characteristic for a well-screened metallic state. At reduced temperatures progressive charge localization sets in, followed by a 2nd order phase transition into a charge-ordered ground state. In both salts groups of new core-level signals occur, shifted towards lower kinetic energies. This is indicative of a reduced transverse-conductivity across the anion layers, visible as layer-dependent charge depletion for both samples. The surface potential was traced via shifts of core-level signals of an adsorbate. A well-defined potential could be established by a conducting cap layer of 5 nm aluminum which appears "transparent" due to the large probing depth of HAXPES (8-10 nm). At the transition into the charge-ordered phase the fluorine 1 s line of (TMTTF)2SbF6 shifts by 2.8 eV to higher binding energy. This is a spectroscopic fingerprint of the loss of inversion symmetry accompanied by a cooperative shift of the SbF6 anions towards the more positively charged TMTTF donors. This shift does not occur for the X = PF6 compound, most likely due to smaller charge disproportion or due to the presence of charge disorder.

Molecular carbon isotope variations in core samples taken at the Permian-Triassic boundary layers in southern China

NASA Astrophysics Data System (ADS)

Wang, Ruiliang; Zhang, Shuichang; Brassell, Simon; Wang, Jiaxue; Lu, Zhengyuan; Ming, Qingzhong; Wang, Xiaomei; Bian, Lizeng

2012-07-01

Stable carbon isotope composition (δ13C) of carbonate sediments and the molecular (biomarker) characteristics of a continuous Permian-Triassic (PT) layer in southern China were studied to obtain geochemical signals of global change at the Permian-Triassic boundary (PTB). Carbonate carbon isotope values shifted toward positive before the end of the Permian period and then shifted negative above the PTB into the Triassic period. Molecular carbon isotope values of biomarkers followed the same trend at and below the PTB and remained negative in the Triassic layer. These biomarkers were acyclic isoprenoids, ranging from C15 to C40, steranes (C27 dominates) and terpenoids that were all significantly more abundant in samples from the Permian layer than those from the Triassic layer. The Triassic layer was distinguished by the dominance of higher molecular weight (waxy) n-alkanes. Stable carbon isotope values of individual components, including n-alkanes and acyclic isoprenoids such as phytane, isop-C25, and squalane, are depleted in δ13C by up to 8-10‰ in the Triassic samples as compared to the Permian. Measured molecular and isotopic variations of organic matter in the PT layers support the generally accepted view of Permian oceanic stagnation followed by a massive upwelling of toxic deep waters at the PTB. A series of large-scale (global) outgassing events may be associated with the carbon isotope shift we measured. This is also consistent with the lithological evidence we observed of white thin-clay layers in this region. Our findings, in context with a generally accepted stagnant Permian ocean, followed by massive upwelling of toxic deep waters might be the major causes of the largest global mass extinction event that occurred at the Permian-Triassic boundary.

Monsoon dependent ecosystems: Implications of the vertical distribution of soil moisture on land surface-atmosphere interactions

NASA Astrophysics Data System (ADS)

Sanchez-Mejia, Zulia M.

Uncertainty of predicted change in precipitation frequency and intensity motivates the scientific community to better understand, quantify, and model the possible outcome of dryland ecosystems. In pulse dependent ecosystems (i.e. monsoon driven) soil moisture is tightly linked to atmospheric processes. Here, I analyze three overarching questions; Q1) How does soil moisture presence or absence in a shallow or deep layer influence the surface energy budget and planetary boundary layer characteristics?, Q2) What is the role of vegetation on ecosystem albedo in the presence or absence of deep soil moisture?, Q3) Can we develop empirical relationships between soil moisture and the planetary boundary layer height to help evaluate the role of future precipitation changes in land surface atmosphere interactions? . To address these questions I use a conceptual framework based on the presence or absence of soil moisture in a shallow or deep layer. I define these layers by using root profiles and establish soil moisture thresholds for each layer using four years of observations from the Santa Rita Creosote Ameriflux site. Soil moisture drydown curves were used to establish the shallow layer threshold in the shallow layer, while NEE (Net Ecosystem Exchange of carbon dioxide) was used to define the deep soil moisture threshold. Four cases were generated using these thresholds: Case 1, dry shallow layer and dry deep layer; Case 2, wet shallow layer and dry deep layer; Case 3, wet shallow layer and wet deep layer, and Case 4 dry shallow and wet deep layer. Using this framework, I related data from the Ameriflux site SRC (Santa Rita Creosote) from 2008 to 2012 and from atmospheric soundings from the nearby Tucson Airport; conducted field campaigns during 2011 and 2012 to measure albedo from individual bare and canopy patches that were then evaluated in a grid to estimate the influence of deep moisture on albedo via vegetation cover change; and evaluated the potential of using a two-layer bucket model and empirical relationships to evaluate the link between deep soil moisture and the planetary boundary layer height under changing precipitation regime. My results indicate that (1) the presence or absence of water in two layers plays a role in surface energy dynamics, (2) soil moisture presence in the deep layer is linked with decreased ecosystem albedo and planetary boundary layer height, (3) deep moisture sustains vegetation greenness and decreases albedo, and (4) empirical relationships are useful in modeling planetary boundary layer height from dryland ecosystems. Based on these results we argue that deep soil moisture plays an important role in land surface-atmosphere interactions.

Metal-phthalocyanine ordered layers on Au(110): Metal-dependent adsorption energy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Massimi, Lorenzo, E-mail: lorenzo.massimi@uniroma1.it; Angelucci, Marco; Gargiani, Pierluigi

2014-06-28

Iron-phthalocyanine and cobalt-phthalocyanine chains, assembled along the Au(110)-(1×2) reconstructed channels, present a strong interaction with the Au metallic states, via the central metal ion. X-ray photoemission spectroscopy from the metal-2p core-levels and valence band high-resolution ultraviolet photoelectron spectroscopy bring to light signatures of the interaction of the metal-phthalocyanine single-layer with gold. The charge transfer from Au to the molecule causes the emerging of a metal-2p core level component at lower binding energy with respect to that measured in the molecular thin films, while the core-levels associated to the organic macrocycle (C and N 1s) are less influenced by the adsorption,more » and the macrocycles stabilize the interaction, inducing a strong interface dipole. Temperature Programmed Desorption experiments and photoemission as a function of temperature allow to estimate the adsorption energy for the thin-films, mainly due to the molecule-molecule van der Waals interaction, while the FePc and CoPc single-layers remain adsorbed on the Au surface up to at least 820 K.« less

Diagnosing radiative shocks from deuterium and tritium implosions on NIF.

PubMed

Pak, A; Divol, L; Weber, S; Döppner, T; Kyrala, G A; Kilne, J; Izumi, N; Glenn, S; Ma, T; Town, R P; Bradley, D K; Glenzer, S H

2012-10-01

During the recent ignition tuning campaign at the National Ignition Facility, layered cryogenic deuterium and tritium capsules were imploded via x-ray driven ablation. The hardened gated x-ray imager diagnostic temporally and spatially resolves the x-ray emission from the core of the capsule implosion at energies above ~8 keV. On multiple implosions, ~200-400 ps after peak compression a spherically expanding radiative shock has been observed. This paper describes the methods used to characterize the radial profile and rate of expansion of the shock induced x-ray emission.

Using the nutrient ratio NO/PO as a tracer of continental shelf waters in the central Arctic Ocean

NASA Astrophysics Data System (ADS)

Wilson, Cara; Wallace, Douglas W. R.

1990-12-01

Historical nitrate, phosphate, and dissolved oxygen data from the central Arctic Ocean are examined with particular emphasis on the conservative parameters NO (9 * NO3 + O2) and PO (135 * PO4 + O2). The NO/PO ratio is shown to increase with depth in the Canada Basin, being ˜0.78 in Surface and Upper Halocline Waters and ˜1.0 in the Atlantic Layer and Deep Waters. Lower Halocline Water is marked by NO and PO minima and intermediate NO/PO. NO/PO ratios from the Arctic shelf seas are examined to determine possible source regions for the various water masses. The NO/PO ratio of Canada Basin Deep Water implies an upper bound of ˜11% shelf water contribution to this water mass. A slight oxygen maximum core in the Lower Halocline Water is identified at a salinity of S = 34.5 in the vicinity of the Alpha Ridge. This core appears to be diminished by diapycnal mixing and does not extend into the Beaufort Gyre.

Phylogenetic analysis of Archaea in the deep-sea sediments of west Pacific Warm Pool.

PubMed

Wang, Peng; Xiao, Xiang; Wang, Fengping

2005-06-01

Archaea are known to play important roles in carbon cycling in marine sediments. The main compositions of archaeal community in five deep-sea sediment samples collected from west Pacific Warm Pool area (WP-0, WP-1, WP-2, WP-3, WP-4), and in five sediment layers (1 cm-, 3 cm-, 6 cm-, 10 cm-, 12 cm- layer) of the 12 cm sediment core of WP-0 were checked and compared by denaturing gradient gel electrophoresis and 16 S rRNA gene sequencing. It was revealed that all the deep-sea sediment samples checked contained members of non-thermophilic marine group I crenarchaeota as the predominant archaeal group. To further detect groups of archaea possibly relating with C1 metabolism, PCR amplification was carried out using primers targeting methane-oxidizing archaea. Although no methane-oxidizing archaea was detected, a group of novel archaea (named as WPA) was instead identified from all these five WP samples by clone analysis. They could be placed in the euryarchaeota kingdom, separated into two distinct groups, the main group was peripherally related with methanogens, the other group related with Thermoplasma. The vertical distributions of WPA, archaea and bacteria along the WP-0 sediment column were determined by quantitative-PCR. It was found that bacteria dominated at all depths, the numbers of bacteria were 10-10(4) times more than those of archaea. The proportion of archaea versus bacteria had a depth related increasing tendency, it was lowest at the first layer (0.01%), reached highest at the 12 cm- layer (10%). WPA only constituted a small proportion of the archaeal community (0.05% to 5%) of west Pacific Warm Pool sediment.

Evolution in the deep sea: biological traits, ecology and phylogenetics of pelagic copepods.

PubMed

Laakmann, Silke; Auel, Holger; Kochzius, Marc

2012-11-01

Deep-sea biodiversity has received increasing interest in the last decade, mainly focusing on benthic communities. In contrast, studies of zooplankton in the meso- to bathypelagic zones are relatively scarce. In order to explore evolutionary processes in the pelagic deep sea, the present study focuses on copepods of two clausocalanoid families, Euchaetidae and Aetideidae, which are abundant and species-rich in the deep-sea pelagic realm. Molecular phylogenies based on concatenated-portioned data on 18S, 28S and internal transcribed spacer 2 (ITS2), as well as mitochondrial cytochrome c oxidase subunit I (COI), were examined on 13 species, mainly from Arctic and Antarctic regions, together with species-specific biological traits (i.e. vertical occurrence, feeding behaviour, dietary preferences, energy storage, and reproductive strategy). Relationships were resolved on genus, species and even sub-species levels, the latter two established by COI with maximum average genetic distances ranging from ≤5.3% at the intra-specific, and 20.6% at the inter-specific level. There is no resolution at a family level, emphasising the state of Euchaetidae and Aetideidae as sister families and suggesting a fast radiation of these lineages, a hypothesis which is further supported by biological parameters. Euchaetidae were similar in lipid-specific energy storage, reproductive strategy, as well as feeding behaviour and dietary preference. In contrast, Aetideidae were more diverse, comprising a variety of characteristics ranging from similar adaptations within Paraeuchaeta, to genera consisting of species with completely different reproductive and feeding ecologies. Reproductive strategies were generally similar within each aetideid genus, but differed between genera. Closely related species (congeners), which were similar in the aforementioned biological and ecological traits, generally occurred in different depth layers, suggesting that vertical partitioning of the water column represents an important mechanism in the speciation processes for these deep-sea copepods. High COI divergence between Arctic and Antarctic specimens of the mesopelagic cosmopolitan Gaetanus tenuispinus and the bipolar Aetideopsis minor suggest different geographic forms, potentially cryptic species or sibling species. On the contrary, Arctic and Antarctic individuals of the bathypelagic cosmopolitans Gaetanus brevispinus and Paraeuchaeta barbata were very similar in COI sequence, suggesting more gene flow at depth and/or that driving forces for speciation were less pronounced in bathypelagic than at mesopelagic depths. Copyright © 2012 Elsevier Inc. All rights reserved.

Extraction of Ice Sheet Layers from Two Intersected Radar Echograms Near Neem Ice Core in Greenland

NASA Astrophysics Data System (ADS)

Xiong, S.; Muller, J.-P.

2016-06-01

Accumulation of snow and ice over time result in ice sheet layers. These can be remotely sensed where there is a contrast in electromagnetic properties, which reflect variations of the ice density, acidity and fabric orientation. Internal ice layers are assumed to be isochronous, deep beneath the ice surface, and parallel to the direction of ice flow. The distribution of internal layers is related to ice sheet dynamics, such as the basal melt rate, basal elevation variation and changes in ice flow mode, which are important parameters to model the ice sheet. Radar echo sounder is an effective instrument used to study the sedimentology of the Earth and planets. Ice Penetrating Radar (IPR) is specific kind of radar echo sounder, which extends studies of ice sheets from surface to subsurface to deep internal ice sheets depending on the frequency utilised. In this study, we examine a study site where folded ice occurs in the internal ice sheet south of the North Greenland Eemian ice drilling (NEEM) station, where two intersected radar echograms acquired by the Multi-channel Coherent Radar Depth Sounder (MCoRDS) employed in the NASA's Operation IceBridge (OIB) mission imaged this folded ice. We propose a slice processing flow based on a Radon Transform to trace and extract these two sets of curved ice sheet layers, which can then be viewed in 3-D, demonstrating the 3-D structure of the ice folds.

The design and performance of IceCube DeepCore

NASA Astrophysics Data System (ADS)

Abbasi, R.; Abdou, Y.; Abu-Zayyad, T.; Ackermann, M.; Adams, J.; Aguilar, J. A.; Ahlers, M.; Allen, M. M.; Altmann, D.; Andeen, K.; Auffenberg, J.; Bai, X.; Baker, M.; Barwick, S. W.; Bay, R.; Bazo Alba, J. L.; Beattie, K.; Beatty, J. J.; Bechet, S.; Becker, J. K.; Becker, K.-H.; Benabderrahmane, M. L.; BenZvi, S.; Berdermann, J.; Berghaus, P.; Berley, D.; Bernardini, E.; Bertrand, D.; Besson, D. Z.; Bindig, D.; Bissok, M.; Blaufuss, E.; Blumenthal, J.; Boersma, D. J.; Bohm, C.; Bose, D.; Böser, S.; Botner, O.; Brown, A. M.; Buitink, S.; Caballero-Mora, K. S.; Carson, M.; Chirkin, D.; Christy, B.; Clevermann, F.; Cohen, S.; Colnard, C.; Cowen, D. F.; Cruz Silva, A. H.; D'Agostino, M. V.; Danninger, M.; Daughhetee, J.; Davis, J. C.; De Clercq, C.; Degner, T.; Demirörs, L.; Descamps, F.; Desiati, P.; de Vries-Uiterweerd, G.; DeYoung, T.; Díaz-Vélez, J. C.; Dierckxsens, M.; Dreyer, J.; Dumm, J. P.; Dunkman, M.; Eisch, J.; Ellsworth, R. W.; Engdegård, O.; Euler, S.; Evenson, P. A.; Fadiran, O.; Fazely, A. R.; Fedynitch, A.; Feintzeig, J.; Feusels, T.; Filimonov, K.; Finley, C.; Fischer-Wasels, T.; Fox, B. D.; Franckowiak, A.; Franke, R.; Gaisser, T. K.; Gallagher, J.; Gerhardt, L.; Gladstone, L.; Glüsenkamp, T.; Goldschmidt, A.; Goodman, J. A.; Góra, D.; Grant, D.; Griesel, T.; Groß, A.; Grullon, S.; Gurtner, M.; Ha, C.; Haj Ismail, A.; Hallgren, A.; Halzen, F.; Han, K.; Hanson, K.; Heinen, D.; Helbing, K.; Hellauer, R.; Hickford, S.; Hill, G. C.; Hoffman, K. D.; Hoffmann, B.; Homeier, A.; Hoshina, K.; Huelsnitz, W.; Hülß, J.-P.; Hulth, P. O.; Hultqvist, K.; Hussain, S.; Ishihara, A.; Jacobi, E.; Jacobsen, J.; Japaridze, G. S.; Johansson, H.; Kampert, K.-H.; Kappes, A.; Karg, T.; Karle, A.; Kenny, P.; Kiryluk, J.; Kislat, F.; Klein, S. R.; Köhne, J.-H.; Kohnen, G.; Kolanoski, H.; Köpke, L.; Koskinen, D. J.; Kowalski, M.; Kowarik, T.; Krasberg, M.; Kroll, G.; Kurahashi, N.; Kuwabara, T.; Labare, M.; Laihem, K.; Landsman, H.; Larson, M. J.; Lauer, R.; Lünemann, J.; Madsen, J.; Marotta, A.; Maruyama, R.; Mase, K.; Matis, H. S.; Meagher, K.; Merck, M.; Mészáros, P.; Meures, T.; Miarecki, S.; Middell, E.; Milke, N.; Miller, J.; Montaruli, T.; Morse, R.; Movit, S. M.; Nahnhauer, R.; Nam, J. W.; Naumann, U.; Nygren, D. R.; Odrowski, S.; Olivas, A.; Olivo, M.; O'Murchadha, A.; Panknin, S.; Paul, L.; Pérez de los Heros, C.; Petrovic, J.; Piegsa, A.; Pieloth, D.; Porrata, R.; Posselt, J.; Price, P. B.; Przybylski, G. T.; Rawlins, K.; Redl, P.; Resconi, E.; Rhode, W.; Ribordy, M.; Richman, M.; Rodrigues, J. P.; Rothmaier, F.; Rott, C.; Ruhe, T.; Rutledge, D.; Ruzybayev, B.; Ryckbosch, D.; Sander, H.-G.; Santander, M.; Sarkar, S.; Schatto, K.; Schmidt, T.; Schönwald, A.; Schukraft, A.; Schultes, A.; Schulz, O.; Schunck, M.; Seckel, D.; Semburg, B.; Seo, S. H.; Sestayo, Y.; Seunarine, S.; Silvestri, A.; Spiczak, G. M.; Spiering, C.; Stamatikos, M.; Stanev, T.; Stezelberger, T.; Stokstad, R. G.; Stößl, A.; Strahler, E. A.; Ström, R.; Stüer, M.; Sullivan, G. W.; Swillens, Q.; Taavola, H.; Taboada, I.; Tamburro, A.; Tepe, A.; Ter-Antonyan, S.; Tilav, S.; Toale, P. A.; Toscano, S.; Tosi, D.; van Eijndhoven, N.; Vandenbroucke, J.; Van Overloop, A.; van Santen, J.; Vehring, M.; Voge, M.; Walck, C.; Waldenmaier, T.; Wallraff, M.; Walter, M.; Weaver, Ch.; Wendt, C.; Westerhoff, S.; Whitehorn, N.; Wiebe, K.; Wiebusch, C. H.; Williams, D. R.; Wischnewski, R.; Wissing, H.; Wolf, M.; Wood, T. R.; Woschnagg, K.; Xu, C.; Xu, D. L.; Xu, X. W.; Yanez, J. P.; Yodh, G.; Yoshida, S.; Zarzhitsky, P.; Zoll, M.

2012-05-01

The IceCube neutrino observatory in operation at the South Pole, Antarctica, comprises three distinct components: a large buried array for ultrahigh energy neutrino detection, a surface air shower array, and a new buried component called DeepCore. DeepCore was designed to lower the IceCube neutrino energy threshold by over an order of magnitude, to energies as low as about 10 GeV. DeepCore is situated primarily 2100 m below the surface of the icecap at the South Pole, at the bottom center of the existing IceCube array, and began taking physics data in May 2010. Its location takes advantage of the exceptionally clear ice at those depths and allows it to use the surrounding IceCube detector as a highly efficient active veto against the principal background of downward-going muons produced in cosmic-ray air showers. DeepCore has a module density roughly five times higher than that of the standard IceCube array, and uses photomultiplier tubes with a new photocathode featuring a quantum efficiency about 35% higher than standard IceCube PMTs. Taken together, these features of DeepCore will increase IceCube's sensitivity to neutrinos from WIMP dark matter annihilations, atmospheric neutrino oscillations, galactic supernova neutrinos, and point sources of neutrinos in the northern and southern skies. In this paper we describe the design and initial performance of DeepCore.

The Design and Performance of IceCube DeepCore

NASA Technical Reports Server (NTRS)

Stamatikos, M.

2012-01-01

The IceCube neutrino observatory in operation at the South Pole, Antarctica, comprises three distinct components: a large buried array for ultrahigh energy neutrino detection, a surface air shower array, and a new buried component called DeepCore. DeepCore was designed to lower the IceCube neutrino energy threshold by over an order of magnitude, to energies as low as about 10 GeV. DeepCore is situated primarily 2100 m below the surface of the icecap at the South Pole, at the bottom center of the existing IceCube array, and began taking pbysics data in May 2010. Its location takes advantage of the exceptionally clear ice at those depths and allows it to use the surrounding IceCube detector as a highly efficient active veto against the principal background of downward-going muons produced in cosmic-ray air showers. DeepCore has a module density roughly five times higher than that of the standard IceCube array, and uses photomultiplier tubes with a new photocathode featuring a quantum efficiency about 35% higher than standard IceCube PMTs. Taken together, these features of DeepCore will increase IceCube's sensitivity to neutrinos from WIMP dark matter annihilations, atmospheric neutrino oscillations, galactic supernova neutrinos, and point sources of neutrinos in the northern and southern skies. In this paper we describe the design and initial performance of DeepCore.

Mean-state acceleration of cloud-resolving models and large eddy simulations

DOE PAGES

Jones, C. R.; Bretherton, C. S.; Pritchard, M. S.

2015-10-29

In this study, large eddy simulations and cloud-resolving models (CRMs) are routinely used to simulate boundary layer and deep convective cloud processes, aid in the development of moist physical parameterization for global models, study cloud-climate feedbacks and cloud-aerosol interaction, and as the heart of superparameterized climate models. These models are computationally demanding, placing practical constraints on their use in these applications, especially for long, climate-relevant simulations. In many situations, the horizontal-mean atmospheric structure evolves slowly compared to the turnover time of the most energetic turbulent eddies. We develop a simple scheme to reduce this time scale separation to accelerate themore » evolution of the mean state. Using this approach we are able to accelerate the model evolution by a factor of 2–16 or more in idealized stratocumulus, shallow and deep cumulus convection without substantial loss of accuracy in simulating mean cloud statistics and their sensitivity to climate change perturbations. As a culminating test, we apply this technique to accelerate the embedded CRMs in the Superparameterized Community Atmosphere Model by a factor of 2, thereby showing that the method is robust and stable to realistic perturbations across spatial and temporal scales typical in a GCM.« less

CRYSTAL-FACE Analysis and Simulations of the July 23rd Extended Anvil Case

NASA Technical Reports Server (NTRS)

Starr, David

2003-01-01

A key focus of CRYSTAL-FACE (Cirrus Regional Study of Tropical Anvils and cirrus Layers - Florida Area Cirrus Experiment) was the generation and subsequent evolution of cirrus outflow from deep convective cloud systems. Present theoretical background and motivations will be discussed. An integrated look at the observations of an extended cirrus anvil cloud system observed on 23 July 2002 will be presented, including lidar and millimeter radar observation; from NASA s ER-2 and in-situ observations from NASA s WB-57 and University of North Dakota Citation. The observations will be compared to results of simulations using 1-D and 2-D high-resolution (100 meter) cloud resolving models. The CRMs explicitly account for cirrus microphysical development by resolving the evolving ice crystal size distribution (bin model) in time and space. Both homogeneous and heterogeneous nucleation are allowed in the model. The CRM simulations are driven using the output of regional simulations using MM5 that produces deep convection similar to what was observed. The MM5 model employs a 2 km inner grid (32 layers) over a 360 km domain, nested within a 6-km grid over a 600-km domain. Initial and boundary conditions for the 36-hour MM5 simulation are taken from NCEP Eta model analysis at 32 km resolution. Key issues to be explored are the settling of the observed anvil versus the model simulations, and comparisons of dynamical properties, such as vertical motions, occurring in the observations and models. The former provides an integrated measure of the validity of the model microphysics (fallspeed) while the latter is the key factor in forcing continued ice generation.

Comparison and Interpretation of Admittance Spectroscopy and Deep Level Transient Spectroscopy from Co-Evaporated and Solution-Deposited Cu2ZnSn(Sx, Se1-x)4 Solar Cells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Caruso, A. E.; Lund, E. A.; Kosyak, V.

2016-11-21

Cu2ZnSn(S, Se)4 (CZTSe) is an earth-abundant semiconductor with potential for economical thin-film photovoltaic devices. Short minority carrier lifetimes contribute to low open circuit voltage and efficiency. Deep level defects that may contribute to lower minority carrier lifetimes in kesterites have been theoretically predicted, however very little experimental characterization of these deep defects exists. In this work we use admittance spectroscopy (AS) and deep level transient spectroscopy (DLTS) to characterize devices built using CZTSSe absorber layers deposited via both coevaporation and solution processing. AS reveals a band of widely-distributed activation energies for traps or energy barriers for transport, especially in themore » solution deposited case. DLTS reveals signatures of deep majority and minority traps within both types of samples.« less

The specific features of pollution spread in the northwest Pacific Ocean

NASA Astrophysics Data System (ADS)

Dianskii, N. A.; Gusev, A. V.; Fomin, V. V.

2012-04-01

We present two calculations of pollutant dispersal in the Pacific Ocean: (1) during possible ship-wrecks in the process of spent nuclear fuel transportation from Petropavlovsk-Kamchatsky and (2) pollutant spread from the Japanese coast after the Fukushima-1 nuclear disaster on March 11, 2011. The circulation was calculated using a σ model of ocean hydrothermodynamics developed at the Institute of Numerical Mathematics (INM), Russian Academy of Sciences (RAS); it is adapted to cover the Pacific Ocean basin from the equator to the Bering Strait with a high (1/8)° spatial resolution and it is capable of reproducing the mesoscale ocean variations. The pollutant dispersal in the case of possible shipwrecks was estimated for currents characteristic for a statistically average year with atmospheric forcing in accordance with the so-called normal CORE year data. The pollution spread from the Fukushima-1 nuclear power plant (NPP) was estimated by calculating the circulation with the real atmospheric forcing in accordance with the NCEP analysis data obtained from the Hydrometeorological Centre of Russia. It is noteworthy that a simplified assimilation of the observed sea surface temperature (SST) was performed. In both cases the currents were calculated simultaneously with the transport calculation of the pollutant as a passive admixture, which corresponds to a real-time calculation of pollutant transport. A map analysis of pollution dispersal shows that the horizontal transport is substantially more intense in the upper ocean layers than in deep ones. Therefore, like in the North branch of Kuroshio, pollutants can be delivered to the deep layers not through deep-water horizontal transport, but rather as a result of vertical downwelling from the already contaminated upper layers. However, the complex three-dimensional structure of the horizontal and vertical transport may lead to reverse situations. A calculation of pollution transport from the Fukushima-1 NPP showed that radioactive pollution would propagate eastward and not present the danger for Russian territory. Moreover, even for an exaggerated scenario of pollution emission, the background pollution level will be exceeded only in a narrow region within 50 km of the Japanese coast.

Patterns in bacterial and archaeal community structure and diversity in western Beaufort Sea sediments and waters

NASA Astrophysics Data System (ADS)

Hamdan, L. J.; Sikaroodi, M.; Coffin, R. B.; Gillevet, P. M.

2010-12-01

A culture-independent phylogenetic study of microbial communities in water samples and sediment cores recovered from the Beaufort Sea slope east of Point Barrow, Alaska was conducted. The goal of the work was to describe community composition in sediment and water samples and determine the influence of local environmental conditions on microbial populations. Archaeal and bacterial community composition was studied using length heterogeneity-polymerase chain reaction (LH-PCR) and multitag pyrosequencing (MTPS). Sediment samples were obtained from three piston cores on the slope (~1000m depth) arrayed along an east-west transect and one core from a depth of approximately 2000m. Discrete water samples were obtained using a CTD-rosette from three locations adjacent to piston core sites. Water sample were selected at three discrete depths within a vertically stratified (density) water column. The microbial community in near surface waters was distinct from the community observed in deeper stratified layers of the water column. Multidimensional scaling analysis (MDS) revealed that water samples from mid and deep stratified layers bore high similarity to communities in cores collected in close proximity. Overall, the highest diversity (bacteria and archaea) was observed in a core which had elevated methane concentration relative to other locations. Geochemical (e.g., bulk organic and inorganic carbon pools, nutrients, metabolites) and physical data (e.g. depth, water content) were used to reveal the abiotic factors structuring microbial communities. The analysis indicates that sediment water content (porosity) and inorganic carbon concentration are the most significant structuring elements on Beaufort shelf sedimentary microbial communities.

Heterogeneous Origins of Human Sleep Spindles in Different Cortical Layers.

PubMed

Hagler, Donald J; Ulbert, István; Wittner, Lucia; Erőss, Loránd; Madsen, Joseph R; Devinsky, Orrin; Doyle, Werner; Fabó, Dániel; Cash, Sydney S; Halgren, Eric

2018-03-21

Sleep spindles are a cardinal feature in human NREM sleep and may be important for memory consolidation. We studied the intracortical organization of spindles in men and women by recording spontaneous sleep spindles from different cortical layers using linear microelectrode arrays. Two patterns of spindle generation were identified using visual inspection, and confirmed with factor analysis. Spindles (10-16 Hz) were largest and most common in upper and middle channels, with limited involvement of deep channels. Many spindles were observed in only upper or only middle channels, but approximately half occurred in both. In spindles involving both middle and upper channels, the spindle envelope onset in middle channels led upper by ∼25-50 ms on average. The phase relationship between spindle waves in upper and middle channels varied dynamically within spindle epochs, and across individuals. Current source density analysis demonstrated that upper and middle channel spindles were both generated by an excitatory supragranular current sink while an additional deep source was present for middle channel spindles only. Only middle channel spindles were accompanied by deep low (25-50 Hz) and high (70-170 Hz) gamma activity. These results suggest that upper channel spindles are generated by supragranular pyramids, and middle channel by infragranular. Possibly, middle channel spindles are generated by core thalamocortical afferents, and upper channel by matrix. The concurrence of these patterns could reflect engagement of cortical circuits in the integration of more focal (core) and distributed (matrix) aspects of memory. These results demonstrate that at least two distinct intracortical systems generate human sleep spindles. SIGNIFICANCE STATEMENT Bursts of ∼14 Hz oscillations, lasting ∼1 s, have been recognized for over 80 years as cardinal features of mammalian sleep. Recent findings suggest that they play a key role in organizing cortical activity during memory consolidation. We used linear microelectrode arrays to study their intracortical organization in humans. We found that spindles could be divided into two types. One mainly engages upper layers of the cortex, which are considered to be specialized for associative activity. The other engages both upper and middle layers, including those devoted to sensory input. The interaction of these two spindle types may help organize the interaction of sensory and associative aspects of memory consolidation. Copyright © 2018 the authors 0270-6474/18/383013-13$15.00/0.

Warm-Core Intensification Through Horizontal Eddy Heat Transports into the Eye

NASA Technical Reports Server (NTRS)

Braun, Scott A.; Montgomery, Michael T.; Fulton, John; Nolan, David S.; Starr, David OC. (Technical Monitor)

2001-01-01

The mechanism for the formation and intensification of the hurricane warm core is not well understood. The generally accepted explanation is that the warm core forms as a result of gentle subsidence of air within the eye that warms as a result of adiabatic compression. Malkus suggested that this subsidence is part of a deep circulation in which air begins descent at high levels in the eye, acquires cyclonic angular momentum as it descends to lower levels, and then diverges at low levels, where it is entrained back into the eyewall. Inward mixing from the eyewall is hypothesized to force the subsidence and maintain the moisture and momentum budgets of the subsiding air. Willoughby suggested that air within the eye has remained so since it was first enclosed during the formation of the eyewall and that it subsides at most only a few kilometers rather than through the depth of the troposphere. He relates the subsidence to the low-level divergence and entrainment into the eyewall noted by Malkus, but suggests that shrinkage of the eye's volume is more than adequate to account for the air lost to the eyewall or converted to cloudy air by turbulent mixing across the eye boundary. Smith offered an alternative view of the subsidence forcing, suggesting that vertical motion in a mature hurricane eye is generated largely by imbalances between the downward vertical pressure gradient force and the upward buoyancy force. The vertical pressure gradient force is associated with the decay and/or radial spread of the tangential wind field with height at those levels were the winds are in approximate gradient wind balance. The rate of subsidence is just that required to warm the air sufficiently such that the buoyancy remains in close hydrostatic balance with an increasing vertical pressure gradient force. In this study, a very high-resolution simulation of Hurricane Bob using a cloud-resolving grid scale of 1.3 km is used to examine the heat budget within the storm with particular emphasis on the mechanisms for warming of the eye.

Combining ground-based microwave radiometer and the AROME convective scale model through 1DVAR retrievals in complex terrain: an Alpine valley case study

NASA Astrophysics Data System (ADS)

Martinet, Pauline; Cimini, Domenico; De Angelis, Francesco; Canut, Guylaine; Unger, Vinciane; Guillot, Remi; Tzanos, Diane; Paci, Alexandre

2017-09-01

A RPG-HATPRO ground-based microwave radiometer (MWR) was operated in a deep Alpine valley during the Passy-2015 field campaign. This experiment aims to investigate how stable boundary layers during wintertime conditions drive the accumulation of pollutants. In order to understand the atmospheric processes in the valley, MWRs continuously provide vertical profiles of temperature and humidity at a high time frequency, providing valuable information to follow the evolution of the boundary layer. A one-dimensional variational (1DVAR) retrieval technique has been implemented during the field campaign to optimally combine an MWR and 1 h forecasts from the French convective scale model AROME. Retrievals were compared to radiosonde data launched at least every 3 h during two intensive observation periods (IOPs). An analysis of the AROME forecast errors during the IOPs has shown a large underestimation of the surface cooling during the strongest stable episode. MWR brightness temperatures were monitored against simulations from the radiative transfer model ARTS2 (Atmospheric Radiative Transfer Simulator) and radiosonde launched during the field campaign. Large errors were observed for most transparent channels (i.e., 51-52 GHz) affected by absorption model and calibration uncertainties while a good agreement was found for opaque channels (i.e., 54-58 GHz). Based on this monitoring, a bias correction of raw brightness temperature measurements was applied before the 1DVAR retrievals. 1DVAR retrievals were found to significantly improve the AROME forecasts up to 3 km but mainly below 1 km and to outperform usual statistical regressions above 1 km. With the present implementation, a root-mean-square error (RMSE) of 1 K through all the atmospheric profile was obtained with values within 0.5 K below 500 m in clear-sky conditions. The use of lower elevation angles (up to 5°) in the MWR scanning and the bias correction were found to improve the retrievals below 1000 m. MWR retrievals were found to catch deep near-surface temperature inversions very well. Larger errors were observed in cloudy conditions due to the difficulty of ground-based MWRs to resolve high level inversions that are still challenging. Finally, 1DVAR retrievals were optimized for the analysis of the IOPs by using radiosondes as backgrounds in the 1DVAR algorithm instead of the AROME forecasts. A significant improvement of the retrievals in cloudy conditions and below 1000 m in clear-sky conditions was observed. From this study, we can conclude that MWRs are expected to bring valuable information into numerical weather prediction models up to 3 km in altitude both in clear-sky and cloudy-sky conditions with the maximum improvement found around 500 m. With an accuracy between 0.5 and 1 K in RMSE, our study has also proven that MWRs are capable of resolving deep near-surface temperature inversions observed in complex terrain during highly stable boundary layer conditions.

A six-color four-laser mobile platform for multi-spectral fluorescence imaging endoscopy

NASA Astrophysics Data System (ADS)

Black, John F.; Tate, Tyler; Keenan, Molly; Swan, Elizabeth; Utzinger, Urs; Barton, Jennifer

2015-03-01

The properties of multi-spectral fluorescence imaging using deep-UV-illumination have recently been explored using a fiber-coupled thermal source at 280 nm. The resulting images show a remarkable level of contrast thought to result from the signal being overwhelmingly generated in the uppermost few cell layers of tissue, making this approach valuable for the study of diseases that originate in the endothelial tissues of the body. With a view to extending the technique with new wavelengths, and improving beam quality for efficient small core fiber coupling we have developed a mobile self-contained tunable solid-state laser source of deep UV light. An alexandrite laser, lasing at around 750 nm is frequency doubled to produce 375 nm and then tripled to produce 250 nm light. An optical deck added to the system allows other laser sources to be incorporated into the UV beam-line and a lens system has been designed to couple these sources into a single delivery fiber with core diameters down to 50 microns. Our system incorporates five wavelengths [250 nm, 375 nm, 442 nm (HeCd), 543 nm (HeNe) and 638 nm (diode laser)] as the illumination source for a small diameter falloposcope designed for the study of the distal Fallopian tube origins of high grade serous ovarian cancer. The tunability of alexandrite offers the potential to generate other wavelengths in the 720-800, 360-400 and 240-265 nm ranges, plus other non-linear optical conversion techniques taking advantage of the high peak powers of the laser.

Optical properties of m-plane GaN grown on patterned Si(112) substrates by MOCVD using a two-step approach

NASA Astrophysics Data System (ADS)

Izyumskaya, N.; Okur, S.; Zhang, F.; Monavarian, M.; Avrutin, V.; Özgür, Ü.; Metzner, S.; Karbaum, C.; Bertram, F.; Christen, J.; Morkoç, H.

2014-03-01

Nonpolar m-plane GaN layers were grown on patterned Si (112) substrates by metal-organic chemical vapor deposition (MOCVD). A two-step growth procedure involving a low-pressure (30 Torr) first step to ensure formation of the m-plane facet and a high-pressure step (200 Torr) for improvement of optical quality was employed. The layers grown in two steps show improvement of the optical quality: the near-bandedge photoluminescence (PL) intensity is about 3 times higher than that for the layers grown at low pressure, and deep emission is considerably weaker. However, emission intensity from m-GaN is still lower than that of polar and semipolar (1 100 ) reference samples grown under the same conditions. To shed light on this problem, spatial distribution of optical emission over the c+ and c- wings of the nonpolar GaN/Si was studied by spatially resolved cathodoluminescence and near-field scanning optical microscopy.

Search for sterile neutrino mixing using three years of IceCube DeepCore data

NASA Astrophysics Data System (ADS)

Aartsen, M. G.; Ackermann, M.; Adams, J.; Aguilar, J. A.; Ahlers, M.; Ahrens, M.; Al Samarai, I.; Altmann, D.; Andeen, K.; Anderson, T.; Ansseau, I.; Anton, G.; Archinger, M.; Argüelles, C.; Auffenberg, J.; Axani, S.; Bai, X.; Barwick, S. W.; Baum, V.; Bay, R.; Beatty, J. J.; Becker Tjus, J.; Becker, K.-H.; BenZvi, S.; Berley, D.; Bernardini, E.; Besson, D. Z.; Binder, G.; Bindig, D.; Blaufuss, E.; Blot, S.; Bohm, C.; Börner, M.; Bos, F.; Bose, D.; Böser, S.; Botner, O.; Braun, J.; Brayeur, L.; Bretz, H.-P.; Bron, S.; Burgman, A.; Carver, T.; Casier, M.; Cheung, E.; Chirkin, D.; Christov, A.; Clark, K.; Classen, L.; Coenders, S.; Collin, G. H.; Conrad, J. M.; Cowen, D. F.; Cross, R.; Day, M.; de André, J. P. A. M.; De Clercq, C.; del Pino Rosendo, E.; Dembinski, H.; De Ridder, S.; Desiati, P.; de Vries, K. D.; de Wasseige, G.; de With, M.; DeYoung, T.; Díaz-Vélez, J. C.; di Lorenzo, V.; Dujmovic, H.; Dumm, J. P.; Dunkman, M.; Eberhardt, B.; Ehrhardt, T.; Eichmann, B.; Eller, P.; Euler, S.; Evenson, P. A.; Fahey, S.; Fazely, A. R.; Feintzeig, J.; Felde, J.; Filimonov, K.; Finley, C.; Flis, S.; Fösig, C.-C.; Franckowiak, A.; Friedman, E.; Fuchs, T.; Gaisser, T. K.; Gallagher, J.; Gerhardt, L.; Ghorbani, K.; Giang, W.; Gladstone, L.; Glauch, T.; Glüsenkamp, T.; Goldschmidt, A.; Gonzalez, J. G.; Grant, D.; Griffith, Z.; Haack, C.; Hallgren, A.; Halzen, F.; Hansen, E.; Hansmann, T.; Hanson, K.; Hebecker, D.; Heereman, D.; Helbing, K.; Hellauer, R.; Hickford, S.; Hignight, J.; Hill, G. C.; Hoffman, K. D.; Hoffmann, R.; Hoshina, K.; Huang, F.; Huber, M.; Hultqvist, K.; In, S.; Ishihara, A.; Jacobi, E.; Japaridze, G. S.; Jeong, M.; Jero, K.; Jones, B. J. P.; Kang, W.; Kappes, A.; Karg, T.; Karle, A.; Katz, U.; Kauer, M.; Keivani, A.; Kelley, J. L.; Kheirandish, A.; Kim, J.; Kim, M.; Kintscher, T.; Kiryluk, J.; Kittler, T.; Klein, S. R.; Kohnen, G.; Koirala, R.; Kolanoski, H.; Konietz, R.; Köpke, L.; Kopper, C.; Kopper, S.; Koskinen, D. J.; Kowalski, M.; Krings, K.; Kroll, M.; Krückl, G.; Krüger, C.; Kunnen, J.; Kunwar, S.; Kurahashi, N.; Kuwabara, T.; Kyriacou, A.; Labare, M.; Lanfranchi, J. L.; Larson, M. J.; Lauber, F.; Lennarz, D.; Lesiak-Bzdak, M.; Leuermann, M.; Lu, L.; Lünemann, J.; Madsen, J.; Maggi, G.; Mahn, K. B. M.; Mancina, S.; Mandelartz, M.; Maruyama, R.; Mase, K.; Maunu, R.; McNally, F.; Meagher, K.; Medici, M.; Meier, M.; Menne, T.; Merino, G.; Meures, T.; Miarecki, S.; Micallef, J.; Momenté, G.; Montaruli, T.; Moulai, M.; Nahnhauer, R.; Naumann, U.; Neer, G.; Niederhausen, H.; Nowicki, S. C.; Nygren, D. R.; Obertacke Pollmann, A.; Olivas, A.; O'Murchadha, A.; Palczewski, T.; Pandya, H.; Pankova, D. V.; Peiffer, P.; Penek, Ö.; Pepper, J. A.; Pérez de los Heros, C.; Pieloth, D.; Pinat, E.; Price, P. B.; Przybylski, G. T.; Quinnan, M.; Raab, C.; Rädel, L.; Rameez, M.; Rawlins, K.; Reimann, R.; Relethford, B.; Relich, M.; Resconi, E.; Rhode, W.; Richman, M.; Riedel, B.; Robertson, S.; Rongen, M.; Rott, C.; Ruhe, T.; Ryckbosch, D.; Rysewyk, D.; Sabbatini, L.; Sanchez Herrera, S. E.; Sandrock, A.; Sandroos, J.; Sarkar, S.; Satalecka, K.; Schlunder, P.; Schmidt, T.; Schoenen, S.; Schöneberg, S.; Schumacher, L.; Seckel, D.; Seunarine, S.; Soldin, D.; Song, M.; Spiczak, G. M.; Spiering, C.; Stachurska, J.; Stanev, T.; Stasik, A.; Stettner, J.; Steuer, A.; Stezelberger, T.; Stokstad, R. G.; Stößl, A.; Ström, R.; Strotjohann, N. L.; Sullivan, G. W.; Sutherland, M.; Taavola, H.; Taboada, I.; Tatar, J.; Tenholt, F.; Ter-Antonyan, S.; Terliuk, A.; Tešić, G.; Tilav, S.; Toale, P. A.; Tobin, M. N.; Toscano, S.; Tosi, D.; Tselengidou, M.; Tung, C. F.; Turcati, A.; Unger, E.; Usner, M.; Vandenbroucke, J.; van Eijndhoven, N.; Vanheule, S.; van Rossem, M.; van Santen, J.; Vehring, M.; Voge, M.; Vogel, E.; Vraeghe, M.; Walck, C.; Wallace, A.; Wallraff, M.; Wandkowsky, N.; Waza, A.; Weaver, Ch.; Weiss, M. J.; Wendt, C.; Westerhoff, S.; Whelan, B. J.; Wickmann, S.; Wiebe, K.; Wiebusch, C. H.; Wille, L.; Williams, D. R.; Wills, L.; Wolf, M.; Wood, T. R.; Woolsey, E.; Woschnagg, K.; Xu, D. L.; Xu, X. W.; Xu, Y.; Yanez, J. P.; Yodh, G.; Yoshida, S.; Zoll, M.; IceCube Collaboration

2017-06-01

We present a search for a light sterile neutrino using three years of atmospheric neutrino data from the DeepCore detector in the energy range of approximately 10-60 GeV. DeepCore is the low-energy subarray of the IceCube Neutrino Observatory. The standard three-neutrino paradigm can be probed by adding an additional light (Δ m412˜1 eV2 ) sterile neutrino. Sterile neutrinos do not interact through the standard weak interaction and, therefore, cannot be directly detected. However, their mixing with the three active neutrino states leaves an imprint on the standard atmospheric neutrino oscillations for energies below 100 GeV. A search for such mixing via muon neutrino disappearance is presented here. The data are found to be consistent with the standard three-neutrino hypothesis. Therefore, we derive limits on the mixing matrix elements at the level of |Uμ 4|2<0.11 and |Uτ 4|2<0.15 (90% C.L.) for the sterile neutrino mass splitting Δ m412=1.0 eV2 .

Phylogenetic Resolution of Deep Eukaryotic and Fungal Relationships Using Highly Conserved Low-Copy Nuclear Genes

PubMed Central

Ren, Ren; Sun, Yazhou; Zhao, Yue; Geiser, David

2016-01-01

Abstract A comprehensive and reliable eukaryotic tree of life is important for many aspects of biological studies from comparative developmental and physiological analyses to translational medicine and agriculture. Both gene-rich and taxon-rich approaches are effective strategies to improve phylogenetic accuracy and are greatly facilitated by marker genes that are universally distributed, well conserved, and orthologous among divergent eukaryotes. In this article, we report the identification of 943 low-copy eukaryotic genes and we show that many of these genes are promising tools in resolving eukaryotic phylogenies, despite the challenges of determining deep eukaryotic relationships. As a case study, we demonstrate that smaller subsets of ∼20 and 52 genes could resolve controversial relationships among widely divergent taxa and provide strong support for deep relationships such as the monophyly and branching order of several eukaryotic supergroups. In addition, the use of these genes resulted in fungal phylogenies that are congruent with previous phylogenomic studies that used much larger datasets, and successfully resolved several difficult relationships (e.g., forming a highly supported clade with Microsporidia, Mitosporidium and Rozella sister to other fungi). We propose that these genes are excellent for both gene-rich and taxon-rich analyses and can be applied at multiple taxonomic levels and facilitate a more complete understanding of the eukaryotic tree of life. PMID:27604879

Tautomerism in cytosine and uracil: an experimental and theoretical core level spectroscopic study.

PubMed

Feyer, Vitaliy; Plekan, Oksana; Richter, Robert; Coreno, Marcello; Vall-llosera, Gemma; Prince, Kevin C; Trofimov, Alexander B; Zaytseva, Irina L; Moskovskaya, Tatyana E; Gromov, Evgeniy V; Schirmer, Jochen

2009-05-14

The O, N, and C 1s core level photoemission spectra of the nucleobases cytosine and uracil have been measured in the vapor phase, and the results have been interpreted via theoretical calculations. Our calculations accurately predict the relative binding energies of the core level features observed in the experimental photoemission results and provide a full assignment. In agreement with previous work, a single tautomer of uracil is populated at 405 K, giving rise to relatively simple spectra. At 450 K, three tautomers of cytosine, one of which may consist of two rotamers, are identified, and their populations are determined. This resolves inconsistencies between recent laser studies of this molecule in which the rare imino-oxo tautomer was not observed and older microwave spectra in which it was reported.

Archaeological investigation by geotomography: structure of the foundation of Yingxian timber pagoda

NASA Astrophysics Data System (ADS)

Feng, Rui; Yan, Wei-Zhang; Feng, Guo-Zheng; Tao, Yu-Lu; Zhou, Hai-Nan; Li, Xiao-Qin

1998-03-01

It is significant to take a non-destructive inspection, one of advanced techniques, for detecting the internal structure and the present status of ancient cultural relics. The results detected by geotomography in Yingxian timber pagoda, Shanxi Province, are presented in this paper. The embankment in the stepped foundation shows a three circular structure in horizontal: the circular platform core is hard, homogenous and unharmed, out of which there are some radial collapsed grooves. The middle circle with a thickness of 2 to 4 m is a compacted layer and its loading capacity decreases then. The outer protective layer has a larger porosity and a weak loading capacity. An abnormal body is found out in the core, which has a circular shape and a reverse high-absorption coefficient in the shallow part, but appears a long-band shape and a low-absorption coefficient in the deep part. It might be a disturbance caused by artificial activities: the shallow part is probably a channel filled with loosen soil and the deep part is a hidden cave. It is found that the foundation of the courtyard is homogenous and integrated. Two soft and weakened areas in the north are related to the long-term run-off and drainage of groundwater. The inclination of the timber pagoda to the northwest and northeast relates to several factors, such as the inherited subsidence of the northern foundation, the lower loading capacity of the outer stepped foundation, seismic activity and timber deformation.

Monitoring brain temperature by time-resolved near-infrared spectroscopy: pilot study

NASA Astrophysics Data System (ADS)

Bakhsheshi, Mohammad Fazel; Diop, Mamadou; St. Lawrence, Keith; Lee, Ting-Yim

2014-05-01

Mild hypothermia (HT) is an effective neuroprotective strategy for a variety of acute brain injuries. However, the wide clinical adaptation of HT has been hampered by the lack of a reliable noninvasive method for measuring brain temperature, since core measurements have been shown to not always reflect brain temperature. The goal of this work was to develop a noninvasive optical technique for measuring brain temperature that exploits both the temperature dependency of water absorption and the high concentration of water in brain (80%-90%). Specifically, we demonstrate the potential of time-resolved near-infrared spectroscopy (TR-NIRS) to measure temperature in tissue-mimicking phantoms (in vitro) and deep brain tissue (in vivo) during heating and cooling, respectively. For deep brain tissue temperature monitoring, experiments were conducted on newborn piglets wherein hypothermia was induced by gradual whole body cooling. Brain temperature was concomitantly measured by TR-NIRS and a thermocouple probe implanted in the brain. Our proposed TR-NIRS method was able to measure the temperature of tissue-mimicking phantoms and brain tissues with a correlation of 0.82 and 0.66 to temperature measured with a thermometer, respectively. The mean difference between the TR-NIRS and thermometer measurements was 0.15°C±1.1°C for the in vitro experiments and 0.5°C±1.6°C for the in vivo measurements.

Mapping virtual addresses to different physical addresses for value disambiguation for thread memory access requests

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gala, Alan; Ohmacht, Martin

A multiprocessor system includes nodes. Each node includes a data path that includes a core, a TLB, and a first level cache implementing disambiguation. The system also includes at least one second level cache and a main memory. For thread memory access requests, the core uses an address associated with an instruction format of the core. The first level cache uses an address format related to the size of the main memory plus an offset corresponding to hardware thread meta data. The second level cache uses a physical main memory address plus software thread meta data to store the memorymore » access request. The second level cache accesses the main memory using the physical address with neither the offset nor the thread meta data after resolving speculation. In short, this system includes mapping of a virtual address to a different physical addresses for value disambiguation for different threads.« less

Radiative Effects of Aerosols

NASA Technical Reports Server (NTRS)

Valero, Francisco P. J.

1996-01-01

During the Atlantic Stratocumulus Transition Experiment (ASTEX) in June 1992, two descents in cloud-free regions allowed comparison of the change in aerosol optical depth as determined by an onboard total-direct-diffuse radiometer (TDDR) to the change calculated from measured size-resolved aerosol microphysics and chemistry. Both profiles included a pollution haze from Europe but the second also included the effect of a Saharan dust layer above the haze. The separate contributions of supermicrometer (coarse) and submicrometer (fine) aerosol were determined and thermal analysis of the pollution haze indicated that the fine aerosol was composed primarily of a sulfate/water mixture with a refractory soot-like core. The soot core increased the calculated extinction by about 10% in the most polluted drier layer relative to a pure sulfate aerosol but had significantly less effect at higher humidities. A 3 km descent through a boundary layer air mass dominated by pollutant aerosol with relative humidities (RH) 10-77% yielded a close agreement between the measured and calculated aerosol optical depths (550 nm) of 0.160 (+/- 0.07) and 0. 157 (+/- 0.034) respectively. During descent the aerosol mass scattering coefficient per unit sulfate mass varied from about 5 to 16 m(exp 2)/g and primarily dependent upon ambient RH. However, the total scattering coefficient per total fine mass was far less variable at about 4+/- 0.7 m(exp 2)/g. A subsequent descent through a Saharan dust layer located above the pollution aerosol layer revealed that both layers contributed similarly to aerosol optical depth. The scattering per unit mass of the coarse aged dust was estimated at 1.1 +/- 0.2 m(exp 2)/g. The large difference (50%) in measured and calculated optical depth for the dust layer exceeded measurements.

Chloroplast phylogenomic analyses resolve deep-level relationships of an intractable bamboo tribe Arundinarieae (poaceae).

PubMed

Ma, Peng-Fei; Zhang, Yu-Xiao; Zeng, Chun-Xia; Guo, Zhen-Hua; Li, De-Zhu

2014-11-01

The temperate woody bamboos constitute a distinct tribe Arundinarieae (Poaceae: Bambusoideae) with high species diversity. Estimating phylogenetic relationships among the 11 major lineages of Arundinarieae has been particularly difficult, owing to a possible rapid radiation and the extremely low rate of sequence divergence. Here, we explore the use of chloroplast genome sequencing for phylogenetic inference. We sampled 25 species (22 temperate bamboos and 3 outgroups) for the complete genome representing eight major lineages of Arundinarieae in an attempt to resolve backbone relationships. Phylogenetic analyses of coding versus noncoding sequences, and of different regions of the genome (large single copy and small single copy, and inverted repeat regions) yielded no well-supported contradicting topologies but potential incongruence was found between the coding and noncoding sequences. The use of various data partitioning schemes in analysis of the complete sequences resulted in nearly identical topologies and node support values, although the partitioning schemes were decisively different from each other as to the fit to the data. Our full genomic data set substantially increased resolution along the backbone and provided strong support for most relationships despite the very short internodes and long branches in the tree. The inferred relationships were also robust to potential confounding factors (e.g., long-branch attraction) and received support from independent indels in the genome. We then added taxa from the three Arundinarieae lineages that were not included in the full-genome data set; each of these were sampled for more than 50% genome sequences. The resulting trees not only corroborated the reconstructed deep-level relationships but also largely resolved the phylogenetic placements of these three additional lineages. Furthermore, adding 129 additional taxa sampled for only eight chloroplast loci to the combined data set yielded almost identical relationships, albeit with low support values. We believe that the inferred phylogeny is robust to taxon sampling. Having resolved the deep-level relationships of Arundinarieae, we illuminate how chloroplast phylogenomics can be used for elucidating difficult phylogeny at low taxonomic levels in intractable plant groups. © The Author(s) 2014. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Classification of Clouds and Deep Convection from GEOS-5 Using Satellite Observations

NASA Technical Reports Server (NTRS)

Putman, William; Suarez, Max

2010-01-01

With the increased resolution of global atmospheric models and the push toward global cloud resolving models, the resemblance of model output to satellite observations has become strikingly similar. As we progress with our adaptation of the Goddard Earth Observing System Model, Version 5 (GEOS-5) as a high resolution cloud system resolving model, evaluation of cloud properties and deep convection require in-depth analysis beyond a visual comparison. Outgoing long-wave radiation (OLR) provides a sufficient comparison with infrared (IR) satellite imagery to isolate areas of deep convection. We have adopted a binning technique to generate a series of histograms for OLR which classify the presence and fraction of clear sky versus deep convection in the tropics that can be compared with a similar analyses of IR imagery from composite Geostationary Operational Environmental Satellite (GOES) observations. We will present initial results that have been used to evaluate the amount of deep convective parameterization required within the model as we move toward cloud system resolving resolutions of 10- to 1-km globally.

Event Recognition Based on Deep Learning in Chinese Texts

PubMed Central

Zhang, Yajun; Liu, Zongtian; Zhou, Wen

2016-01-01

Event recognition is the most fundamental and critical task in event-based natural language processing systems. Existing event recognition methods based on rules and shallow neural networks have certain limitations. For example, extracting features using methods based on rules is difficult; methods based on shallow neural networks converge too quickly to a local minimum, resulting in low recognition precision. To address these problems, we propose the Chinese emergency event recognition model based on deep learning (CEERM). Firstly, we use a word segmentation system to segment sentences. According to event elements labeled in the CEC 2.0 corpus, we classify words into five categories: trigger words, participants, objects, time and location. Each word is vectorized according to the following six feature layers: part of speech, dependency grammar, length, location, distance between trigger word and core word and trigger word frequency. We obtain deep semantic features of words by training a feature vector set using a deep belief network (DBN), then analyze those features in order to identify trigger words by means of a back propagation neural network. Extensive testing shows that the CEERM achieves excellent recognition performance, with a maximum F-measure value of 85.17%. Moreover, we propose the dynamic-supervised DBN, which adds supervised fine-tuning to a restricted Boltzmann machine layer by monitoring its training performance. Test analysis reveals that the new DBN improves recognition performance and effectively controls the training time. Although the F-measure increases to 88.11%, the training time increases by only 25.35%. PMID:27501231

Event Recognition Based on Deep Learning in Chinese Texts.

PubMed

Zhang, Yajun; Liu, Zongtian; Zhou, Wen

2016-01-01

Event recognition is the most fundamental and critical task in event-based natural language processing systems. Existing event recognition methods based on rules and shallow neural networks have certain limitations. For example, extracting features using methods based on rules is difficult; methods based on shallow neural networks converge too quickly to a local minimum, resulting in low recognition precision. To address these problems, we propose the Chinese emergency event recognition model based on deep learning (CEERM). Firstly, we use a word segmentation system to segment sentences. According to event elements labeled in the CEC 2.0 corpus, we classify words into five categories: trigger words, participants, objects, time and location. Each word is vectorized according to the following six feature layers: part of speech, dependency grammar, length, location, distance between trigger word and core word and trigger word frequency. We obtain deep semantic features of words by training a feature vector set using a deep belief network (DBN), then analyze those features in order to identify trigger words by means of a back propagation neural network. Extensive testing shows that the CEERM achieves excellent recognition performance, with a maximum F-measure value of 85.17%. Moreover, we propose the dynamic-supervised DBN, which adds supervised fine-tuning to a restricted Boltzmann machine layer by monitoring its training performance. Test analysis reveals that the new DBN improves recognition performance and effectively controls the training time. Although the F-measure increases to 88.11%, the training time increases by only 25.35%.

A Melting Layer Model for Passive/Active Microwave Remote Sensing Applications. Part 1; Model Formulation and Comparison with Observations

NASA Technical Reports Server (NTRS)

Olson, William S.; Bauer, Peter; Viltard, Nicolas F.; Johnson, Daniel E.; Tao, Wei-Kuo

2000-01-01

In this study, a 1-D steady-state microphysical model which describes the vertical distribution of melting precipitation particles is developed. The model is driven by the ice-phase precipitation distributions just above the freezing level at applicable gridpoints of "parent" 3-D cloud-resolving model (CRM) simulations. It extends these simulations by providing the number density and meltwater fraction of each particle in finely separated size categories through the melting layer. The depth of the modeled melting layer is primarily determined by the initial material density of the ice-phase precipitation. The radiative properties of melting precipitation at microwave frequencies are calculated based upon different methods for describing the dielectric properties of mixed phase particles. Particle absorption and scattering efficiencies at the Tropical Rainfall Measuring Mission Microwave Imager frequencies (10.65 to 85.5 GHz) are enhanced greatly for relatively small (approx. 0.1) meltwater fractions. The relatively large number of partially-melted particles just below the freezing level in stratiform regions leads to significant microwave absorption, well-exceeding the absorption by rain at the base of the melting layer. Calculated precipitation backscatter efficiencies at the Precipitation Radar frequency (13.8 GHz) increase in proportion to the particle meltwater fraction, leading to a "bright-band" of enhanced radar reflectivities in agreement with previous studies. The radiative properties of the melting layer are determined by the choice of dielectric models and the initial water contents and material densities of the "seeding" ice-phase precipitation particles. Simulated melting layer profiles based upon snow described by the Fabry-Szyrmer core-shell dielectric model and graupel described by the Maxwell-Garnett water matrix dielectric model lead to reasonable agreement with radar-derived melting layer optical depth distributions. Moreover, control profiles that do not contain mixed-phase precipitation particles yield optical depths that are systematically lower than those observed. Therefore, the use of the melting layer model to extend 3-D CRM simulations appears justified, at least until more realistic spectral methods for describing melting precipitation in high-resolution, 3-D CRM's are implemented.

Deep generative learning of location-invariant visual word recognition.

PubMed

Di Bono, Maria Grazia; Zorzi, Marco

2013-01-01

It is widely believed that orthographic processing implies an approximate, flexible coding of letter position, as shown by relative-position and transposition priming effects in visual word recognition. These findings have inspired alternative proposals about the representation of letter position, ranging from noisy coding across the ordinal positions to relative position coding based on open bigrams. This debate can be cast within the broader problem of learning location-invariant representations of written words, that is, a coding scheme abstracting the identity and position of letters (and combinations of letters) from their eye-centered (i.e., retinal) locations. We asked whether location-invariance would emerge from deep unsupervised learning on letter strings and what type of intermediate coding would emerge in the resulting hierarchical generative model. We trained a deep network with three hidden layers on an artificial dataset of letter strings presented at five possible retinal locations. Though word-level information (i.e., word identity) was never provided to the network during training, linear decoding from the activity of the deepest hidden layer yielded near-perfect accuracy in location-invariant word recognition. Conversely, decoding from lower layers yielded a large number of transposition errors. Analyses of emergent internal representations showed that word selectivity and location invariance increased as a function of layer depth. Word-tuning and location-invariance were found at the level of single neurons, but there was no evidence for bigram coding. Finally, the distributed internal representation of words at the deepest layer showed higher similarity to the representation elicited by the two exterior letters than by other combinations of two contiguous letters, in agreement with the hypothesis that word edges have special status. These results reveal that the efficient coding of written words-which was the model's learning objective-is largely based on letter-level information.

Responses of the deep ocean carbonate system to carbon reorganization during the Last Glacial-interglacial cycle

NASA Astrophysics Data System (ADS)

Yu, Jimin; Anderson, Robert F.; Jin, Zhangdong; Rae, James W. B.; Opdyke, Bradley N.; Eggins, Stephen M.

2013-09-01

We present new deep water carbonate ion concentration ([CO32-]) records, reconstructed using Cibicidoides wuellerstorfi B/Ca, for one core from Caribbean Basin (water depth = 3623 m, sill depth = 1.8 km) and three cores located at 2.3-4.3 km water depth from the equatorial Pacific Ocean during the Last Glacial-interglacial cycle. The pattern of deep water [CO32-] in the Caribbean Basin roughly mirrors that of atmospheric CO2, reflecting a dominant influence from preformed [CO32-] in the North Atlantic Ocean. Compared to the amplitude of ˜65 μmol/kg in the deep Caribbean Basin, deep water [CO32-] in the equatorial Pacific Ocean has varied by no more than ˜15 μmol/kg due to effective buffering of CaCO3 on deep-sea pH in the Pacific Ocean. Our results suggest little change in the global mean deep ocean [CO32-] between the Last Glacial Maximum (LGM) and the Late Holocene. The three records from the Pacific Ocean show long-term increases in [CO32-] by ˜7 μmol/kg from Marine Isotope Stage (MIS) 5c to mid MIS 3, consistent with the response of the deep ocean carbonate system to a decline in neritic carbonate production associated with ˜60 m drop in sea-level (the “coral-reef” hypothesis). Superimposed upon the long-term trend, deep water [CO32-] in the Pacific Ocean displays transient changes, which decouple with δ13C in the same cores, at the start and end of MIS 4. These changes in [CO32-] and δ13C are consistent with what would be expected from vertical nutrient fractionation and carbonate compensation. The observed ˜4 μmol/kg [CO32-] decline in the two Pacific cores at >3.4 km water depth from MIS 3 to the LGM indicate further strengthening of deep ocean stratification, which contributed to the final step of atmospheric CO2 drawdown during the last glaciation. The striking similarity between deep water [CO32-] and 230Th-normalized CaCO3 flux at two adjacent sites from the central equatorial Pacific Ocean provides convincing evidence that deep-sea carbonate dissolution dominantly controlled CaCO3 preservation at these sites in the past. Our results offer new and quantitative constraints from deep ocean carbonate chemistry to understand roles of various mechanisms in atmospheric CO2 changes over the Last Glacial-interglacial cycle.

Probing the deep critical zone beneath the Luquillo Experimental Forest, Puerto Rico

DOE Office of Scientific and Technical Information (OSTI.GOV)

Buss, Heather; Brantley, S. L.; Scatena, Fred

2013-01-01

Recent work has suggested that weathering processes occurring in the subsurface produce the majority of silicate weathering products discharged to the world s oceans, thereby exerting a primary control on global temperature via the well-known positive feedback between silicate weathering and CO2. In addition, chemical and physical weathering processes deep within the critical zone create aquifers and control groundwater chemistry, watershed geometry and regolith formation rates. Despite this, most weathering studies are restricted to the shallow critical zone (e.g., soils, outcrops). Here we investigate the chemical weathering, fracturing and geomorphology of the deep critical zone in the Bisley watershed inmore » the Luquillo Critical Zone Observatory, Puerto Rico, from two boreholes drilled to 37.2 and 27.0 m depth, from which continuous core samples were taken. Corestones exposed aboveground were also sampled. Weathered rinds developed on exposed corestones and along fracture surfaces on subsurface rocks slough off of exposed corestones once rinds attain a thickness up to ~1 cm, preventing the corestones from rounding due to diffusion limitation. Such corestones at the land surface are assumed to be what remains after exhumation of similar, fractured bedrock pieces that were observed in the drilled cores between thick layers of regolith. Some of these subsurface corestones are massive and others are highly fractured, whereas aboveground corestones are generally massive with little to no apparent fracturing. Subsurface corestones are larger and less fractured in the borehole drilled on a road where it crosses a ridge compared to the borehole drilled where the road crosses the stream channel. Both borehole profiles indicate that the weathering zone extends to well below the stream channel in this upland catchment; hence weathering depth is not controlled by the stream level within the catchment and not all of the water in the watershed is discharged to the stream.« less

Probing the deep critical zone beneath the Luquillo Experimental Forest, Puerto Rico

USGS Publications Warehouse

Buss, Heather L.; Brantley, Susan L.; Scatena, Fred; Bazilevskaya, Katya; Blum, Alex E.; Schulz, Marjorie S.; Jiménez, Rafael; White, Arthur F.; Rother, G.; Cole, D.

2013-01-01

Recent work has suggested that weathering processes occurring in the subsurface produce the majority of silicate weathering products discharged to the world's oceans, thereby exerting a primary control on global temperature via the well-known positive feedback between silicate weathering and CO2. In addition, chemical and physical weathering processes deep within the critical zone create aquifers and control groundwater chemistry, watershed geometry and regolith formation rates. Despite this, most weathering studies are restricted to the shallow critical zone (e.g. soils, outcrops). Here we investigate the chemical weathering, fracturing and geomorphology of the deep critical zone in the Bisley watershed in the Luquillo Critical Zone Observatory, Puerto Rico, from two boreholes drilled to 37.2 and 27.0 m depth, from which continuous core samples were taken. Corestones exposed aboveground were also sampled. Weathered rinds developed on exposed corestones and along fracture surfaces on subsurface rocks slough off of exposed corestones once rinds attain a thickness up to ~1 cm, preventing the corestones from rounding due to diffusion limitation. Such corestones at the land surface are assumed to be what remains after exhumation of similar, fractured bedrock pieces that were observed in the drilled cores between thick layers of regolith. Some of these subsurface corestones are massive and others are highly fractured, whereas aboveground corestones are generally massive with little to no apparent fracturing. Subsurface corestones are larger and less fractured in the borehole drilled on a road where it crosses a ridge compared with the borehole drilled where the road crosses the stream channel. Both borehole profiles indicate that the weathering zone extends to well below the stream channel in this upland catchment; hence weathering depth is not controlled by the stream level within the catchment and not all of the water in the watershed is discharged to the stream

Comparing Molecular Variation to Morphological Species Designations in the Deep-Sea Coral Narella Reveals New Insights into Seamount Coral Ranges

PubMed Central

Baco, Amy R.; Cairns, Stephen D.

2012-01-01

Recent studies have countered the paradigm of seamount isolation, confounding conservation efforts at a critical time. Efforts to study deep-sea corals, one of the dominant taxa on seamounts, to understand seamount connectivity, are hampered by a lack of taxonomic keys. A prerequisite for connectivity is species overlap. Attempts to better understand species overlap using DNA barcoding methods suggest coral species are widely distributed on seamounts and nearby features. However, no baseline has been established for variation in these genetic markers relative to morphological species designations for deep-sea octocoral families. Here we assess levels of genetic variation in potential octocoral mitochondrial barcode markers relative to thoroughly examined morphological species in the genus Narella. The combination of six markers used here, approximately 3350 bp of the mitochondrial genome, resolved 83% of the morphological species. Our results show that two of the markers, ND2 and NCR1, are not sufficient to resolve genera within Primnoidae, let alone species. Re-evaluation of previous studies of seamount octocorals based on these results suggest that those studies were looking at distributions at a level higher than species, possibly even genus or subfamily. Results for Narella show that using more markers provides haplotypes with relatively narrow depth ranges on the seamounts studied. Given the lack of 100% resolution of species with such a large portion of the mitochondrial genome, we argue that previous genetic studies have not resolved the degree of species overlap on seamounts and that we may not have the power to even test the hypothesis of seamount isolation using mitochondrial markers, let alone refute it. Thus a precautionary approach is advocated in seamount conservation and management, and the potential for depth structuring should be considered. PMID:23029093

Isoprenoid quinones resolve the stratification of microbial redox processes in a biogeochemical continuum from the photic zone to deep anoxic sediments of the Black Sea.

PubMed

Becker, Kevin W; Elling, Felix J; Schröder, Jan M; Lipp, Julius S; Goldhammer, Tobias; Zabel, Matthias; Elvert, Marcus; Overmann, Jörg; Hinrichs, Kai-Uwe

2018-03-09

The stratified water column of the Black Sea serves as a model ecosystem for studying the interactions of microorganisms with major biogeochemical cycles. Here we provide detailed analysis of isoprenoid quinones to study microbial redox processes in the ocean. In a continuum from the photic zone through the chemocline into deep anoxic sediments of the southern Black Sea, diagnostic quinones and inorganic geochemical parameters indicate niche segregation between redox processes and corresponding shifts in microbial community composition. Quinones specific for oxygenic photosynthesis and aerobic respiration dominate oxic waters, while quinones associated with thaumarchaeal ammonia-oxidation and bacterial methanotrophy, respectively, dominate a narrow interval in suboxic waters. Quinone distributions indicate highest metabolic diversity within the anoxic zone, with anoxygenic photosynthesis being a major process in its photic layer. In the dark anoxic layer, quinone profiles indicate occurrence of bacterial sulfur and nitrogen cycling, archaeal methanogenesis, and archaeal methanotrophy. Multiple novel ubiquinone isomers, possibly originating from unidentified intra-aerobic anaerobes, occur in this zone. The respiration modes found in the anoxic zone continue into shallow subsurface sediments, but quinone abundances rapidly decrease within the upper 50 cm below sea floor, reflecting the transition to lower energy availability. In the deep subseafloor sediments, quinone distributions and geochemical profiles indicate archaeal methanogenesis/methanotrophy and potentially bacterial fermentative metabolisms. We observed that sedimentary quinone distributions track lithology, which supports prior hypotheses that deep biosphere community composition and metabolisms are determined by environmental conditions during sediment deposition. Importance Microorganisms play crucial roles in global biogeochemical cycles. Yet, we have only a fragmentary understanding of the diversity of microorganisms and their metabolisms, as the majority remains uncultured. Thus, culture-independent approaches are critical for determining microbial diversity and active metabolic processes. In order to resolve the stratification of microbial communities in the Black Sea, we comprehensively analyzed redox process-specific isoprenoid quinone biomarkers in a unique continuous record from the photic zone through the chemocline into anoxic subsurface sediments. We describe an unprecedented quinone diversity that allowed us to detect distinct biogeochemical processes including oxygenic photosynthesis, archaeal ammonia oxidation, aerobic methanotrophy and anoxygenic photosynthesis in defined geochemical zones. Copyright © 2018 American Society for Microbiology.

Deep learning of support vector machines with class probability output networks.

PubMed

Kim, Sangwook; Yu, Zhibin; Kil, Rhee Man; Lee, Minho

2015-04-01

Deep learning methods endeavor to learn features automatically at multiple levels and allow systems to learn complex functions mapping from the input space to the output space for the given data. The ability to learn powerful features automatically is increasingly important as the volume of data and range of applications of machine learning methods continues to grow. This paper proposes a new deep architecture that uses support vector machines (SVMs) with class probability output networks (CPONs) to provide better generalization power for pattern classification problems. As a result, deep features are extracted without additional feature engineering steps, using multiple layers of the SVM classifiers with CPONs. The proposed structure closely approaches the ideal Bayes classifier as the number of layers increases. Using a simulation of classification problems, the effectiveness of the proposed method is demonstrated. Copyright © 2014 Elsevier Ltd. All rights reserved.

Retinyl palmitate flexible polymeric nanocapsules: characterization and permeation studies.

PubMed

Teixeira, Zaine; Zanchetta, Beatriz; Melo, Bruna A G; Oliveira, Luciana L; Santana, Maria H A; Paredes-Gamero, Edgar J; Justo, Giselle Z; Nader, Helena B; Guterres, Sílvia S; Durán, Nelson

2010-11-01

Polymeric nanocapsules with elastic characteristics were prepared by the pre-formed polymer interfacial deposition method. The system consists of an oily core of retinyl palmitate with Span 60 and a polymeric wall of poly(D,L-lactide) (PLA). A narrow size distribution (215 nm, P.D.I. 0.10) was showed by dynamic light scattering (DLS) analyses. Particle deformability was observed by transmission electron microscopy (TEM) images and permeation of the particles through two superposed membranes of smaller pore diameters. Permeation studies were achieved using plastic surgery abdominal human skin by Franz diffusion cell. Retinyl palmitate permeates into deep skin layers. Besides, a PLA fluorescent derivative conjugated with Nile blue dye by an amide covalent bound was additionally obtained. Permeation profile of the nanocapsules with the fluorescent polymer was evaluated by confocal laser scanning microscopy (CLSM). The CLSM showed that nanocapsules were distributed uniformly, suggesting that the permeation mechanism through skin is intercellular. Thus, the use of these nanocapsules may be a feasible strategy to enhance the permeation of actives into the skin when delivery to deep layers is aimed. Copyright (c) 2010 Elsevier B.V. All rights reserved.

First continuous flow analysis results from the Greenland ReCAP project

NASA Astrophysics Data System (ADS)

Kjær, Helle Astrid

2016-04-01

The new Renland ice core was drilled in summer 2015 in Greenland and measured by means of Continuous flow analysis during the last 3 months of 2015. The Renland ice core was obtained as part of the ReCAP project, extending 584.11 meters to the bottom of the Renland ice cap located in east Greenland. The unique position on a mountain saddle above 2000 meters altitude, but close to the coast, ensures that the Renland ice core offers high accumulation, but also reaches far back in time. Preliminary results show that the record holds ice from the past warm interglacial period, the Eemian. The record was analyzed for multiple elements including the forest fire tracers NH4+ and black carbon, insoluble dust particles by means of Abakus laser particle counter and the dust ion Ca2+, sea salt Na and acidity useful for finding volcanic layers to date the core. Further H2O2, and the nutrients Fe and dissolved reactive phosphorus was analyzed as well as the temperature indicator δ18O all by means of continuous flow analysis (CFA). The core was melted at a rate of 3 cm/min providing a temporal resolution for most components determined sufficient to resolve annual layers through the Holocene. The glacial section is strongly thinned, but nonetheless due to the high resolution of the measurements all DO events could be identified. Below the glacial section another ˜20 meters of warm Eemian ice have been analysed. Here we present the first chemistry results as obtained by continuous flow analysis (CFA).

Continuous methane measurements from a late Holocene Greenland ice core: Atmospheric and in-situ signals

NASA Astrophysics Data System (ADS)

Rhodes, Rachael H.; Faïn, Xavier; Stowasser, Christopher; Blunier, Thomas; Chappellaz, Jérôme; McConnell, Joseph R.; Romanini, Daniele; Mitchell, Logan E.; Brook, Edward J.

2013-04-01

Ancient air trapped inside bubbles in ice cores can now be analysed for methane concentration utilising a laser spectrometer coupled to a continuous melter system. We present a new ultra-high resolution record of atmospheric methane variability over the last 1800 yr obtained from continuous analysis of a shallow ice core from the North Greenland Eemian project (NEEM-2011-S1) during a 4-week laboratory-based measurement campaign. Our record faithfully replicates the form and amplitudes of multi-decadal oscillations previously observed in other ice cores and demonstrates the detailed depth resolution (5.3 cm), rapid acquisition time (30 m day-1) and good long-term reproducibility (2.6%, 2σ) of the continuous measurement technique. In addition, we report the detection of high frequency ice core methane signals of non-atmospheric origin. Firstly, measurements of air from the firn-ice transition region and an interval of ice core dating from 1546-1560 AD (gas age) resolve apparently quasi-annual scale methane oscillations. Traditional gas chromatography measurements on discrete ice samples confirm these signals and indicate peak-to-peak amplitudes of ca. 22 parts per billion (ppb). We hypothesise that these oscillations result from staggered bubble close-off between seasonal layers of contrasting density during time periods of sustained multi-year atmospheric methane change. Secondly, we report the detection of abrupt (20-100 cm depth interval), high amplitude (35-80 ppb excess) methane spikes in the NEEM ice that are reproduced by discrete measurements. We show for the first time that methane spikes present in thin and infrequent layers in polar, glacial ice are accompanied by elevated concentrations of carbon- and nitrogen-based chemical impurities, and suggest that biological in-situ production may be responsible.

Zonation of Microbial Communities by a Hydrothermal Mound in the Atlantis II Deep (the Red Sea).

PubMed

Wang, Yong; Li, Jiang Tao; He, Li Sheng; Yang, Bo; Gao, Zhao Ming; Cao, Hui Luo; Batang, Zenon; Al-Suwailem, Abdulaziz; Qian, Pei-Yuan

2015-01-01

In deep-sea geothermal rift zones, the dispersal of hydrothermal fluids of moderately-high temperatures typically forms subseafloor mounds. Major mineral components of the crust covering the mound are barite and metal sulfides. As a result of the continental rifting along the Red Sea, metalliferous sediments accumulate on the seafloor of the Atlantis II Deep. In the present study, a barite crust was identified in a sediment core from the Atlantis II Deep, indicating the formation of a hydrothermal mound at the sampling site. Here, we examined how such a dense barite crust could affect the local environment and the distribution of microbial inhabitants. Our results demonstrate distinctive features of mineral components and microbial communities in the sediment layers separated by the barite crust. Within the mound, archaea accounted for 65% of the community. In contrast, the sediments above the barite boundary were overwhelmed by bacteria. The composition of microbial communities under the mound was similar to that in the sediments of the nearby Discovery Deep and marine cold seeps. This work reveals the zonation of microbial communities after the formation of the hydrothermal mound in the subsurface sediments of the rift basin.

Zonation of Microbial Communities by a Hydrothermal Mound in the Atlantis II Deep (the Red Sea)

PubMed Central

Wang, Yong; Li, Jiang Tao; He, Li Sheng; Yang, Bo; Gao, Zhao Ming; Cao, Hui Luo; Batang, Zenon; Al-Suwailem, Abdulaziz; Qian, Pei-Yuan

2015-01-01

In deep-sea geothermal rift zones, the dispersal of hydrothermal fluids of moderately-high temperatures typically forms subseafloor mounds. Major mineral components of the crust covering the mound are barite and metal sulfides. As a result of the continental rifting along the Red Sea, metalliferous sediments accumulate on the seafloor of the Atlantis II Deep. In the present study, a barite crust was identified in a sediment core from the Atlantis II Deep, indicating the formation of a hydrothermal mound at the sampling site. Here, we examined how such a dense barite crust could affect the local environment and the distribution of microbial inhabitants. Our results demonstrate distinctive features of mineral components and microbial communities in the sediment layers separated by the barite crust. Within the mound, archaea accounted for 65% of the community. In contrast, the sediments above the barite boundary were overwhelmed by bacteria. The composition of microbial communities under the mound was similar to that in the sediments of the nearby Discovery Deep and marine cold seeps. This work reveals the zonation of microbial communities after the formation of the hydrothermal mound in the subsurface sediments of the rift basin. PMID:26485717

Ceres’ impact craters: probes of near-surface internal structure and composition

NASA Astrophysics Data System (ADS)

Bland, Michael T.; Raymond, Carol; Park, Ryan; Schenk, Paul; McCord, Tom; Reddy, Vishnu; King, Scott; Sykes, Mark; Russell, Chris

2015-11-01

Dawn Framing Camera images of Ceres have revealed the existence of a heavily cratered surface. Shape models derived from these images indicate that most (though not all) large craters are quite deep: up to 6 km for craters larger than 100 km in diameter. The retention of deep craters is not consistent with a simple differentiated internal structure consisting of an outer layer composed solely of pure water ice (covered with a rocky lag) overlying a rocky core. Here we use finite element simulations to show that, for Ceres’ relatively warm surface temperatures, the timescale required to completely flatten a crater 60-km in diameter (or greater) is less than 100 Myr, assuming a relatively pure outer ice layer (for ice grain sizes ≤ 1 cm). Preserving substantial topography requires that the viscosity of Ceres’ outer-most layer (25-50 km thick) is substantially greater than that of pure water ice. A factor of ten increase in viscosity can be achieved by assuming the layer is a 50/50 ice-rock mixture by volume; however, our simulations show that such an increase is insufficient to prevent substantial relaxation over timescales of 1 Gyr. Only particulate volume fractions greater than 50% provide an increase in viscosity sufficient to prevent large-scale, rapid relaxation. Such volume fractions suggest an outer layer composed of frozen soil/regolith (i.e., more rock than ice by volume), a very salt-rich layer, or both. Notably, while most basins appear quite deep, a few relatively shallow basins have been observed (e.g., Coniraya), suggesting that relaxation may be occurring over very long timescales (e.g., 4 Ga), that Ceres’ interior is compositionally and spatial heterogeneous, and/or that temporal evolution of the interior structure and composition has occurred. If these shallow basins are in fact the result of relaxation, it places an upper limit on the viscosity of Ceres’ outer-most interior layer, implying at least some low-viscosity material is present and likely eliminating the possibility of a purely rocky (homogeneous, low density, high porosity) interior.

Geochemical and sedimentological records of intermediate-depth circulation in the Labrador Sea since the Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Hoffmann, S. S.; Dalsing, R.; McManus, J. F.

2016-12-01

Dynamical sedimentary proxies for deep ocean circulation, such as mean sortable silt size and 231Pa/230Th, allow the reconstruction of past changes in deep water circulation speed and ocean basin ventilation. This provides an important addition to traditional methods of deep water circulation reconstruction such as mapping water mass geometry through foraminiferal carbon isotopic records. We have produced records of mean sortable silt size from three intermediate-depth sediment core sites in the Labrador Sea, taken from the continental slope and Orphan Knoll east of Newfoundland, to reconstruct changes in intermediate depth water circulation including Glacial North Atlantic Intermediate Water and Labrador Sea Water. Radiocarbon dating indicates that the cores span the Holocene, deglaciation and LGM. Increases in mean sortable silt size appear to coincide with Heinrich Event 1, the Older Dryas, Younger Dryas, and mid-late Holocene, which could suggest increased bottom current speeds at these times. However, ice-rafted debris contributes to marine sediments in this region, and mean sortable silt size at times of major IRD input such as Heinrich Event 1 may therefore reflect multiple influences. We will use inverse modeling techniques to determine likely end members contributing to the sortable silt fraction and to correct for the effect of IRD on sortable silt size, allowing a better understanding of the influence of current speed on these samples. We combine these sortable silt measurements with the sedimentary geochemical proxy 231Pa/230Th, which has been used to reconstruct changes in North Atlantic meridional overturning circulation. New 231Pa/230Th data from cores KN158-4-27/28, which provided our best-resolved sortable silt record, will allow us to compare results from the two dynamical proxies to better understand both the behavior of these proxies in the Labrador Sea, and the history of intermediate-depth circulation and ventilation in the Labrador Sea during major abrupt climate events and transitions.

Tropical Cyclone Diurnal Cycle as Observed by TRMM

PubMed Central

Leppert, Kenneth D.; Cecil, Daniel J.

2018-01-01

Previous work has indicated a clear, consistent diurnal cycle in rainfall and cold cloudiness coverage around tropical cyclones. This cycle may have important implications for structure and intensity changes of these storms and the forecasting of such changes. The goal of this paper is to use passive and active microwave measurements from the Tropical Rainfall Measuring Mission (TRMM) Microwave Imager (TMI) and Precipitation Radar (PR), respectively, to better understand the tropical cyclone diurnal cycle throughout a deep layer of a tropical cyclone’s clouds. The composite coverage by PR reflectivity ≥20 dBZ at various heights as a function of local standard time (LST) and radius suggests the presence of a diurnal signal for radii <500 km through a deep layer (2–10 km height) of the troposphere using 1998–2011 Atlantic tropical cyclones of at least tropical storm strength. The area covered by reflectivity ≥20 dBZ at radii 100–500 km peaks in the morning (0130–1030 LST) and reaches a minimum 1030–1930 LST. Radii between 300–500 km tend to reach a minimum in coverage closer to 1200 LST before reaching another peak at 2100 LST. The inner core (0–100 km) appears to be associated with a single-peaked diurnal cycle only at upper levels (8–10 km) with a maximum at 2230−0430 LST. The TMI rainfall composites suggest a clear diurnal cycle at all radii between 200 and 1000 km with peak rainfall coverage and rain rate occurring in the morning (0130−0730 LST). PMID:29371745

Deep circulation changes in the South Atlantic since the Last Glacial Maximum from Nd isotope and multi-proxy records

NASA Astrophysics Data System (ADS)

Wei, R.; Abouchami, W.; Zahn, R.; Masque, P.

2016-01-01

We report down-core sedimentary Nd isotope (εNd) records from two South Atlantic sediment cores, MD02-2594 and GeoB3603-2, located on the western South African continental margin. The core sites are positioned downstream of the present-day flow path of North Atlantic Deep Water (NADW) and close to the Southern Ocean, which makes them suitable for reconstructing past variability in NADW circulation over the last glacial cycle. The Fe-Mn leachates εNd records show a coherent decreasing trend from glacial radiogenic values towards less radiogenic values during the Holocene. This trend is confirmed by εNd in fish debris and mixed planktonic foraminifera, albeit with an offset during the Holocene to lower values relative to the leachates, matching the present-day composition of NADW in the Cape Basin. We interpret the εNd changes as reflecting the glacial shoaling of Southern Ocean waters to shallower depths combined with the admixing of southward flowing Northern Component Water (NCW). A compilation of Atlantic εNd records reveals increasing radiogenic isotope signatures towards the south and with increasing depth. This signal is most prominent during the Last Glacial Maximum (LGM) and of similar amplitude across the Atlantic basin, suggesting continuous deep water production in the North Atlantic and export to the South Atlantic and the Southern Ocean. The amplitude of the εNd change from the LGM to Holocene is largest in the southernmost cores, implying a greater sensitivity to the deglacial strengthening of NADW at these sites. This signal impacted most prominently the South Atlantic deep and bottom water layers that were particularly deprived of NCW during the LGM. The εNd variations correlate with changes in 231Pa/230Th ratios and benthic δ13C across the deglacial transition. Together with the contrasting 231Pa/230Th: εNd pattern of the North and South Atlantic, this indicates a progressive reorganization of the AMOC to full strength during the Holocene.

Meteorological variables to aid forecasting deep slab avalanches on persistent weak layers

USGS Publications Warehouse

Marienthal, Alex; Hendrikx, Jordy; Birkeland, Karl; Irvine, Kathryn M.

2015-01-01

Deep slab avalanches are particularly challenging to forecast. These avalanches are difficult to trigger, yet when they release they tend to propagate far and can result in large and destructive avalanches. We utilized a 44-year record of avalanche control and meteorological data from Bridger Bowl ski area in southwest Montana to test the usefulness of meteorological variables for predicting seasons and days with deep slab avalanches. We defined deep slab avalanches as those that failed on persistent weak layers deeper than 0.9 m, and that occurred after February 1st. Previous studies often used meteorological variables from days prior to avalanches, but we also considered meteorological variables over the early months of the season. We used classification trees and random forests for our analyses. Our results showed seasons with either dry or wet deep slabs on persistent weak layers typically had less precipitation from November through January than seasons without deep slabs on persistent weak layers. Days with deep slab avalanches on persistent weak layers often had warmer minimum 24-hour air temperatures, and more precipitation over the prior seven days, than days without deep slabs on persistent weak layers. Days with deep wet slab avalanches on persistent weak layers were typically preceded by three days of above freezing air temperatures. Seasonal and daily meteorological variables were found useful to aid forecasting dry and wet deep slab avalanches on persistent weak layers, and should be used in combination with continuous observation of the snowpack and avalanche activity.

Extreme event archived in the geological record of the Japan Trench: New results from R/V Sonne Cruise SO-251 towards establishing J-TRACK paleoseismology

NASA Astrophysics Data System (ADS)

Strasser, Michael; Kopf, Achim; Kanamatsu, Toshyia; Moernaut, Jasper; Ikehara, Ken; McHugh, Cecila

2017-04-01

Our perspective of subduction zonés earthquake magnitude and recurrence is limited by short historical records. Examining prehistoric extreme events preserved in the geological record is essential towards understanding large earthquakes and assessing the geohazard potential associated with such rare events. The research field of "subaquatic paleoseismology" is a promising approach to investigate deposits from the deep sea, where earthquakes leave traces preserved in stratigraphic succession. However, at present we lack comprehensive data set that allow conclusive distinctions between quality and completeness of the paleoseismic archives as they may relate to different sediment transport, erosion and deposition processes vs. variability of intrinsic seismogenic behavior across different segments. Initially building on what sedimentary deposits were generated from the 2011 Magnitude 9 Tohoku-oki earthquake, the Japan Trench is a promising study area to investigate earthquake-triggered sediment remobilization processes and how they become embedded in the stratigraphic record. Here we present new results from the recent R/V Sonne expedition SO251 that acquired a complete high-resolution bathymetric map of the trench axis and nearly 2000 km of subbottom Parasound profiles, covering the entire along-strike extent of the Japan Trench from 36° to 40.3° N, and groundtruthed by several nearly 10m long piston cores retrieved from the very deep waters (7 to 8 km below sea level): Several smaller submarine landslide (up to several 100's m of lateral extent) can be identified along the trench axis in the new bathymetric data set. These features were either not yet present, or not resolved in the lower-resolution bathymetric dataset acquired before 2011. Sub-bottom acoustic reflection data reveals striking, up to several meter thick, acoustically transparent bodies interbedded in the otherwise parallel reflection pattern of the trench fill basins, providing a temporal and spatial inventory of major sediment remobilization events along the Japan Trench with potential quantitative constraints on volumes and mass fluxes of material mobilized during each event. Also the cores from the southern and northern part of the Japan Trench confirm previous findings from the central part near the Tohoku-oki epicenter, that the small deep-sea trench-fill basins, that are associated with very high sedimentation rates, comprise repeated thick turbidite sequences to be further tested for correlation to historic earthquakes. Eventually, the results of Cruise SO251 will be integrated with cores and data from various other cruises to provide a solid base for later long-coring efforts and scientific drilling, as proposed within the IODP JTRACK initiative, towards potentially producing a fascinating record unravelling an earthquake history that is 10 to a 100 times longer than currently available information.

Compositional Variations of Paleogene and Neogene Tephra From the Northern Izu-Bonin-Mariana Arc

NASA Astrophysics Data System (ADS)

Tepley, F. J., III; Barth, A. P.; Brandl, P. A.; Hickey-Vargas, R.; Jiang, F.; Kanayama, K.; Kusano, Y.; Li, H.; Marsaglia, K. M.; McCarthy, A.; Meffre, S.; Savov, I. P.; Yogodzinski, G. M.

2014-12-01

A primary objective of IODP Expedition 351 was to evaluate arc initiation processes of the Izu-Bonin-Mariana (IBM) volcanic arc and its compositional evolution through time. To this end, a single thick section of sediment overlying oceanic crust was cored in the Amami Sankaku Basin where a complete sediment record of arc inception and evolution is preserved. This sediment record includes ash and pyroclasts, deposited in fore-arc, arc, and back-arc settings, likely associated with both the ~49-25 Ma emergent IBM volcanic arc and the evolving Ryukyu-Kyushu volcanic arc. Our goal was to assess the major element evolution of the nascent and evolving IBM system using the temporally constrained record of the early and developing system. In all, more than 100 ash and tuff layers, and pyroclastic fragments were selected from temporally resolved portions of the core, and from representative fractions of the overall core ("core catcher"). The samples were prepared to determine major and minor element compositions via electron microprobe analyses. This ash and pyroclast record will allow us to 1) resolve the Paleogene evolutionary history of the northern IBM arc in greater detail; 2) determine compositional variations of this portion of the IBM arc through time; 3) compare the acquired data to an extensive whole rock and tephra dataset from other segments of the IBM arc; 4) test hypotheses of northern IBM arc evolution and the involvement of different source reservoirs; and 5) mark important stratigraphic markers associated with the Neogene volcanic history of the adjacent evolving Ryukyu-Kyushu arc.

Predicting survival time for cold exposure

NASA Astrophysics Data System (ADS)

Tikuisis, Peter

1995-06-01

The prediction of survival time (ST) for cold exposure is speculative as reliable controlled data of deep hypothermia are unavailable. At best, guidance can be obtained from case histories of accidental exposure. This study describes the development of a mathematical model for the prediction of ST under sedentary conditions in the cold. The model is based on steady-state heat conduction in a single cylinder comprised of a core and two concentric annular shells representing the fat plus skin and the clothing plus still boundary layer, respectively. The ambient condition can be either air or water; the distinction is made by assigning different values of insulation to the still boundary layer. Metabolic heat production ( M) is comprised of resting and shivering components with the latter predicted by temperature signals from the core and skin. Where the cold exposure is too severe for M to balance heat loss, ST is largely determined by the rate of heat loss from the body. Where a balance occurs, ST is governed by the endurance time for shivering. End of survival is marked by the deep core temperature reaching a value of 30° C. The model was calibrated against survival data of cold water (0 to 20° C) immersion and then applied to cold air exposure. A sampling of ST predictions for the nude exposure of an average healthy male in relatively calm air (1 km/h wind speed) are the following: 1.8, 2.5, 4.1, 9.0, and >24 h for -30, -20, -10, 0, and 10° C, respectively. With two layers of loose clothing (average thickness of 1 mm each) in a 5 km/h wind, STs are 4.0, 5.6, 8.6, 15.4, and >24 h for -50, -40, -30, -20, and -10° C. The predicted STs must be weighted against the extrapolative nature of the model. At present, it would be prudent to use the predictions in a relative sense, that is, to compare or rank-order predicted STs for various combinations of ambient conditions and clothing protection.

Identification of nitrogen- and host-related deep-level traps in n-type GaNAs and their evolution upon annealing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gelczuk, Ł., E-mail: lukasz.gelczuk@pwr.edu.pl; Kudrawiec, R., E-mail: robert.kudrawiec@pwr.edu.pl; Henini, M.

2014-07-07

Deep level traps in as-grown and annealed n-GaNAs layers (doped with Si) of various nitrogen concentrations (N=0.2%, 0.4%, 0.8%, and 1.2%) were investigated by deep level transient spectroscopy. In addition, optical properties of GaNAs layers were studied by photoluminescence and contactless electroreflectance. The identification of N- and host-related traps has been performed on the basis of band gap diagram [Kudrawiec, Appl. Phys. Lett. 101, 082109 (2012)], which assumes that the activation energy of electron traps of the same microscopic nature decreases with the rise of nitrogen concentration in accordance with the N-related shift of the conduction band towards trap levels.more » The application of this diagram has allowed to investigate the evolution of donor traps in GaNAs upon annealing. In general, it was observed that the concentration of N- and host-related traps decreases after annealing and PL improves very significantly. However, it was also observed that some traps are generated due to annealing. It explains why the annealing conditions have to be carefully optimized for this material system.« less

Platinum assisted vapor-liquid-solid growth of er-si nanowires and their optical properties.

PubMed

Kim, Myoung-Ha; Kim, Il-Soo; Park, Yong-Hee; Park, Tae-Eon; Shin, Jung H; Choi, Heon-Jin

2009-11-14

We report the optical activation of erbium coated silicon nanowires (Er-SiNWs) grown with the assist of platinum (Pt) and gold (Au), respectively. The NWs were grown on Si substrates by using a chemical vapor transport process using SiCl4 and ErCl4 as precursors. Pt as well as Au worked successfully as vapor-liquid-solid (VLS) catalysts for growing SiNWs with diameters of ~100 nm and length of several micrometers, respectively. The SiNWs have core-shell structures where the Er-crystalline layer is sandwiched between silica layers. Photoluminescence spectra analyses showed the optical activity of SiNWs from both Pt and Au. A stronger Er3+ luminescence of 1,534 nm was observed from the SiNWs with Pt at room- and low-temperature (25 K) using the 488- and/or 477-nm line of an Ar laser that may be due to the uniform incorporation of more Er ions into NWs with the exclusion of the formation of catalyst-induced deep levels in the band-gap. Pt would be used as a VLS catalyst for high performance optically active Er-SiNWs.

Platinum Assisted Vapor-Liquid-Solid Growth of Er-Si Nanowires and Their Optical Properties

NASA Astrophysics Data System (ADS)

Kim, Myoung-Ha; Kim, Il-Soo; Park, Yong-Hee; Park, Tae-Eon; Shin, Jung H.; Choi, Heon-Jin

2010-02-01

We report the optical activation of erbium coated silicon nanowires (Er-SiNWs) grown with the assist of platinum (Pt) and gold (Au), respectively. The NWs were grown on Si substrates by using a chemical vapor transport process using SiCl4 and ErCl4 as precursors. Pt as well as Au worked successfully as vapor-liquid-solid (VLS) catalysts for growing SiNWs with diameters of ~100 nm and length of several micrometers, respectively. The SiNWs have core-shell structures where the Er-crystalline layer is sandwiched between silica layers. Photoluminescence spectra analyses showed the optical activity of SiNWs from both Pt and Au. A stronger Er3+ luminescence of 1,534 nm was observed from the SiNWs with Pt at room- and low-temperature (25 K) using the 488- and/or 477-nm line of an Ar laser that may be due to the uniform incorporation of more Er ions into NWs with the exclusion of the formation of catalyst-induced deep levels in the band-gap. Pt would be used as a VLS catalyst for high performance optically active Er-SiNWs.

S-to-P Conversions from Mid-mantle Slow Scatterers in Slab Regions: Observations of Deep/Stagnated Oceanic Crust?

NASA Astrophysics Data System (ADS)

He, Xiaobo; Zheng, Yixian

2018-02-01

The fate of a subducted slab is a key ingredient in the context of plate tectonics, yet it remains enigmatic especially in terms of its crustal component. In this study, our efforts are devoted to resolve slab-related structures in the mid-mantle below eastern Indonesia, the Izu-Bonin region, and the Peru area by employing seismic array analysing techniques on high-frequency waveform data from F-net in Japan and the Alaska regional network and the USArray in North America. A pronounced arrival after the direct P wave is observed in the recordings of four deep earthquakes (depths greater than 400 km) from three subduction systems including the Philippines, the Izu-Bonin, and the Peru. This later arrival displays a slightly lower slowness compared to the direct P wave and its back-azimuth deviates somewhat from the great-circle direction. We explain it as an S-to-P conversion at a deep scatterer below the sources in the source region. In total, five scatterers are seen at depths ranging from 930 to 1500 km. Those scatterers appear to be characterised by an 7 km-thick low-velocity layer compared to the ambient mantle. Combined evidence from published mineral physical analysis suggests that past subducted oceanic crust, possibly fragmented, is most likely responsible for these thin-layer compositional heterogeneities trapped in the mid-mantle beneath the study regions. Our observations give a clue to the potential fate of subducted oceanic crust.

Opportunities and obstacles for deep learning in biology and medicine.

PubMed

Ching, Travers; Himmelstein, Daniel S; Beaulieu-Jones, Brett K; Kalinin, Alexandr A; Do, Brian T; Way, Gregory P; Ferrero, Enrico; Agapow, Paul-Michael; Zietz, Michael; Hoffman, Michael M; Xie, Wei; Rosen, Gail L; Lengerich, Benjamin J; Israeli, Johnny; Lanchantin, Jack; Woloszynek, Stephen; Carpenter, Anne E; Shrikumar, Avanti; Xu, Jinbo; Cofer, Evan M; Lavender, Christopher A; Turaga, Srinivas C; Alexandari, Amr M; Lu, Zhiyong; Harris, David J; DeCaprio, Dave; Qi, Yanjun; Kundaje, Anshul; Peng, Yifan; Wiley, Laura K; Segler, Marwin H S; Boca, Simina M; Swamidass, S Joshua; Huang, Austin; Gitter, Anthony; Greene, Casey S

2018-04-01

Deep learning describes a class of machine learning algorithms that are capable of combining raw inputs into layers of intermediate features. These algorithms have recently shown impressive results across a variety of domains. Biology and medicine are data-rich disciplines, but the data are complex and often ill-understood. Hence, deep learning techniques may be particularly well suited to solve problems of these fields. We examine applications of deep learning to a variety of biomedical problems-patient classification, fundamental biological processes and treatment of patients-and discuss whether deep learning will be able to transform these tasks or if the biomedical sphere poses unique challenges. Following from an extensive literature review, we find that deep learning has yet to revolutionize biomedicine or definitively resolve any of the most pressing challenges in the field, but promising advances have been made on the prior state of the art. Even though improvements over previous baselines have been modest in general, the recent progress indicates that deep learning methods will provide valuable means for speeding up or aiding human investigation. Though progress has been made linking a specific neural network's prediction to input features, understanding how users should interpret these models to make testable hypotheses about the system under study remains an open challenge. Furthermore, the limited amount of labelled data for training presents problems in some domains, as do legal and privacy constraints on work with sensitive health records. Nonetheless, we foresee deep learning enabling changes at both bench and bedside with the potential to transform several areas of biology and medicine. © 2018 The Authors.

Opportunities and obstacles for deep learning in biology and medicine

PubMed Central

2018-01-01

Deep learning describes a class of machine learning algorithms that are capable of combining raw inputs into layers of intermediate features. These algorithms have recently shown impressive results across a variety of domains. Biology and medicine are data-rich disciplines, but the data are complex and often ill-understood. Hence, deep learning techniques may be particularly well suited to solve problems of these fields. We examine applications of deep learning to a variety of biomedical problems—patient classification, fundamental biological processes and treatment of patients—and discuss whether deep learning will be able to transform these tasks or if the biomedical sphere poses unique challenges. Following from an extensive literature review, we find that deep learning has yet to revolutionize biomedicine or definitively resolve any of the most pressing challenges in the field, but promising advances have been made on the prior state of the art. Even though improvements over previous baselines have been modest in general, the recent progress indicates that deep learning methods will provide valuable means for speeding up or aiding human investigation. Though progress has been made linking a specific neural network's prediction to input features, understanding how users should interpret these models to make testable hypotheses about the system under study remains an open challenge. Furthermore, the limited amount of labelled data for training presents problems in some domains, as do legal and privacy constraints on work with sensitive health records. Nonetheless, we foresee deep learning enabling changes at both bench and bedside with the potential to transform several areas of biology and medicine. PMID:29618526

The deep-sea as a final global sink of semivolatile persistent organic pollutants? Part I: PCBs in surface and deep-sea dwelling fish of the north and south Atlantic and the Monterey Bay Canyon (California).

PubMed

Froescheis, O; Looser, R; Cailliet, G M; Jarman, W M; Ballschmiter, K

2000-03-01

The understanding of the global environmental multiphase distribution of persistent organic pollutants (POPs) as a result of the physico-chemical properties of the respective compounds is well established. We have analysed the results of a vertical transport of POPs from upper water layers (0-200 m) to the deepwater region (> 800 m) in terms of the contamination of the biophase in both water layers. The contents of persistent organochlorine compounds like polychlorinated biphenyls (PCBs) in fish living in the upper water layers of the North Atlantic and the South Atlantic, and at the continental shelf of California (Marine Sanctuary Monterey Bay and its deep-sea Canyon) are compared to the levels in deep-sea or bottom dwelling fish within the same geographic area. The deep-sea biota show significantly higher burdens as compared to surface-living species of the same region. There are also indications for recycling processes of POPs--in this case the PCBs--in the biophase of the abyss as well. It can be concluded that the bio- and geo phase of the deep-sea may act similarly as the upper horizons of forest and grasslands on the continents as an ultimate global sink for POPs in the marine environment.

RESOLVE: Bridge between early lunar ISRU and science objectives

NASA Astrophysics Data System (ADS)

Taylor, G.; Sanders, G.; Larson, W.; Johnson, K.

2007-08-01

THE NEED FOR RESOURCES: When mankind returns to the moon, there will be an aspect of the architecture that will totally change how we explore the solar system. We will take the first steps towards breaking our reliance on Earth supplied consumables by extracting resources from planetary bodies. Our first efforts in this area, known as In-Situ Resource Utilization (ISRU), will be to extract the abundant oxygen found in the lunar regolith. But the "holy grail" of lunar ISRU will be finding an exploitable source of lunar hydrogen. If we can find a source of extractable hydrogen, it would provide a foundation for true independence from Earth. With in-situ hydrogen (or water) and oxygen we can produce many of the major consumables needed to operate a lunar outpost. We would have water to drink, oxygen to breath, as well as rocket propellants and fuel cell reagents to enable extended access and operations on the moon. These items make up a huge percentage of the mass launched from the Earth. Producing them in-situ would significantly reduce the cost of operating a lunar outpost while increasing payload availability for science. PROSPECTING: The Lunar Prospector found evidence of elevated hydrogen at the lunar poles, and measurements made at these locations from the Clementine mission bistatic radar have been interpreted as correlating to water/ice concentrations. At the South Pole, there is reasonably strong correlation between the elevated areas of hydrogen and permanently shadowed craters. However, there is considerable debate on the form and concentration of this hydrogen since the orbiting satellites had limited resolution and their data can be interpreted in different ways. The varying interpretations are based on differing opinions and theories of lunar environment, evolution, and cometary bombardment within the lunar Science community. The only way to truly answer this question from both a Science and resource availability perspective is to go to the lunar poles and make direct measurements. With this in mind, NASA initiated development of a payload named RESOLVE (Regolith & Environment Science and Oxygen & Lunar Volatile Extraction) that could be flown to the lunar poles and answer the questions surrounding the hydrogen: what's its form? how much is there? how deep or distributed is it? To do this, RESOLVE will use a drill to take a 1-2 meter core sample, crush and heat sample segments of the core in an oven and monitor the amount and type of volatile gases that evolve with a gas chromatograph (GC). RESOLVE will also selectively capture both hydrogen gas and water as a secondary method of quantification. A specialized camera that is coupled with a Raman spectrometer will allow core samples to be microscopically examined while also determining its mineral composition and possible water content before heating. Because RESOLVE is aimed at demonstrating capabilities and techniques that might be later used for ISRU, a multi-use oven is utilized with the ability to produce oxygen using the hydrogen reduction method. SCIENCE BENEFITS: In the process of answering the hydrogen question, the RESOLVE instrument suite will provide data that can address a number of other scientific questions and debate issues, especially the sources of volatiles and reactions that might take place in cold traps. It should be noted that the original instrument suite for RESOLVE was selected to accomplish the largest number of ISRU and science objectives as possible within the limited funding available. Complementary instruments are noted when additional science objectives can be accomplished. Incorporation of these new instruments into RESOLVE and potential partnerships is an area of near-term interest. Sources of Volatiles: The main proposed sources are episodic comet impacts, moreor- less continuous micrometeorite (both comet and asteroidal) impacts, solar wind bombardment, occasional volcanic emissions from the interior, and episodic delivery of interstellar volatiles from cold molecular clouds. These sources leave distinctive signatures, many detectable by RESOLVE. Comet impacts are likely to produce coherent layers of ice (probably reduced to pebbles and boulders by subsequent small impacts, and buried); these would be detected by imaging and Raman spectroscopy, the high water (H2O) signal measured by the GC, and possibly by changes in the drilling rate or torque. More continuous delivery mechanism theories would not produce layers or boulders of ice, but might bond regolith grains together. Continuous sources might be distinguished by H/H2O ratios and the abundances of other volatiles. Hydrogen isotopic composition would provide additional important information because these sources have distinctive D/H ratios, so one enhancement to RESOLVE would be an incorporation of a mass spectrometer with the existing GC. Reactions in the Polar Regolith: Billions of years of micrometeorite bombardment, irradiation by cosmic rays and interstellar Lyman-alpha ultraviolet, and the presence of carbon-, hydrogen-, oxygen-, and nitrogen-bearing volatiles might have led to the production of organic compounds, a process that has been demonstrated experimentally. Heating by micrometeorite impacts might drive reactions involving water to produce phyllosilicates (clay minerals). If abundant enough, these reaction products could be observable by Raman spectroscopy and GC analysis. Thus, the polar cold traps are natural laboratories for the study of processes operating in interstellar space, and the RESOLVE suite of instruments can shed light on those processes.

Strategy for synthesizing quantum dot-layered double hydroxide nanocomposites and their enhanced photoluminescence and photostability.

PubMed

Cho, Seungho; Jung, Sungwook; Jeong, Sanghwa; Bang, Jiwon; Park, Joonhyuck; Park, Youngrong; Kim, Sungjee

2013-01-08

Layered double hydroxide-quantum dot (LDH-QD) composites are synthesized via a room temperature LDH formation reaction in the presence of QDs. InP/ZnS (core/shell) QD, a heavy metal free QD, is used as a model constituent. Interactions between QDs (with negative zeta potentials), decorated with dihydrolipoic acids, and inherently positively charged metal hydroxide layers of LDH during the LDH formations are induced to form the LDH-QD composites. The formation of the LDH-QD composites affords significantly enhanced photoluminescence quantum yields and thermal- and photostabilities compared to their QD counterparts. In addition, the fluorescence from the solid LDH-QD composite preserved the initial optical properties of the QD colloid solution without noticeable deteriorations such as red-shift or deep trap emission. Based on their advantageous optical properties, we also demonstrate the pseudo white light emitting diode, down-converted by the LDH-QD composites.

Lower Mantle S-wave Velocity Model under the Western United States

NASA Astrophysics Data System (ADS)

Nelson, P.; Grand, S. P.

2016-12-01

Deep mantle plumes created by thermal instabilities at the core-mantle boundary has been an explanation for intraplate volcanism since the 1970's. Recently, broad slow velocity conduits in the lower mantle underneath some hotspots have been observed (French and Romanowicz, 2015), however the direct detection of a classical thin mantle plume using seismic tomography has remained elusive. Herein, we present a seismic tomography technique designed to image a deep mantle plume under the Yellowstone Hotspot located in the western United States utilizing SKS and SKKS waves in conjunction with finite frequency tomography. Synthetic resolution tests show the technique can resolve a 235 km diameter lower mantle plume with a 1.5% Gaussian velocity perturbation even if a realistic amount of random noise is added to the data. The Yellowstone Hotspot presents a unique opportunity to image a thin plume because it is the only hotspot with a purported deep origin that has a large enough aperture and density of seismometers to accurately sample the lower mantle at the length scales required to image a plume. Previous regional tomography studies largely based on S wave data have imaged a cylindrically shaped slow anomaly extending down to 900km under the hotspot, however they could not resolve it any deeper (Schmandt et al., 2010; Obrebski et al., 2010).To test if the anomaly extends deeper, we measured and inverted over 40,000 SKS and SKKS waves' travel times in two frequency bands recorded at 2400+ stations deployed during 2006-2012. Our preliminary model shows narrow slow velocity anomalies in the lower mantle with no fast anomalies. The slow anomalies are offset from the Yellowstone hotspot and may be diapirs rising from the base of the mantle.

Spatio-Temporal Variability of Recent Snow Accumulation Across the West Antarctic Ice Sheet Divide Using Ultra-High Frequency Radar and Shallow Firn Cores

NASA Astrophysics Data System (ADS)

Keeler, D. G.; Rupper, S.; Forster, R. R.; Miège, C.; Brewer, S.; Koenig, L.

2017-12-01

The West Antarctic Ice Sheet (WAIS) could be a substantial source of future sea level rise, with 3+ meters of potential increase stored in the ice sheet. Adequate predictions of WAIS contributions, however, depend on well-constrained surface mass balance estimates for the region. Given the sparsity of available data, such estimates are tenuous. Although new data are periodically added, further research (both to collect more data and better utilize existing data) is critical to addressing these issues. Here we present accumulation data from 9 shallow firn cores and 600 km of Ku band radar traces collected as part of the Satellite Era Antarctic Traverse (SEAT) 2011/2012 field season. Using these data, combined with similar data collected during the SEAT 2010/2011 field season, we investigate the spatial variability in accumulation across the WAIS Divide and surrounding regions. We utilize seismic interpretation and 3D visualization tools to investigate the extent and variations of laterally continuous internal horizons in the radar profiles, and compare the results to nearby firn cores. Previous results show that clearly visible, laterally continuous horizons in radar returns in this area do not always represent annual accumulation isochrones, but can instead represent multi-year or sub-annual events. The automated application of Bayesian inference techniques to averaged estimates of multiple adjacent radar traces, however, can estimate annually-resolved independent age-depth scales for these radar data. We use these same automated techniques on firn core isotopic records to infer past snow accumulation rates, allowing a direct comparison with the radar-derived results. Age-depth scales based on manual annual-layer counting of geochemical and isotopic species from these same cores provide validation for the automated approaches. Such techniques could theoretically be applied to additional radar/core data sets in polar regions (e.g. Operation IceBridge), thereby increasing the number of high resolution accumulation records available in these data-sparse regions. An increased understanding of the variability in magnitude and past rates of surface mass balance can provide better constraints on sea level projections and more precise context for present-day and future observations in these regions.

Stratigraphic framework and lake level history of Lake Kivu, East African Rift

NASA Astrophysics Data System (ADS)

Wood, Douglas A.; Scholz, Christopher A.

2017-10-01

Sediment cores and seismic reflection data acquired from the eastern basin of Lake Kivu, Rwanda reveal extensive limnologic variations due to changes in regional climate and basin structure. The eastern basin of the lake contains a sedimentary wedge which is > 1.5 km in thickness on its western side, and basal sediments are estimated to be at least 1.5 million years old. Sediments are likely to be thicker and older than this in the northern, Congolese basin of the lake. Above the ∼300 m iosbath only a thin layer of Holocene sediments are observed indication that this may have been the lake's high stand prior to that time. There are at least three erosional unconformities interpreted as desiccation or near-desiccation events which are estimated to have occurred at ∼475 ka, ∼100 ka, and ∼20 ka; the two most recent of these low stages likely developed during the African Megadrought and Last Glacial Maximum (LGM) periods. Following the LGM, the water levels rose to form a ∼100 m deep lake with its surface ∼370 m below the current lake level. The lake remained near that level for several thousand years and during this time the Virunga Volcanic Province expanded. At ∼12.2 ka a change to wetter climate conditions rapidly filled the lake to spill out of the Bukavu Bay basin southward toward Lake Tanganyika. Tephra sampled from the cores show that there have been at least 24 large local volcanic events since the early Holocene lake transgression.

Surface-geophysical techniques used to detect existing and infilled scour holes near bridge piers

USGS Publications Warehouse

Placzek, Gary; Haeni, F.P.

1995-01-01

Surface-geophysical techniques were used with a position-recording system to study riverbed scour near bridge piers. From May 1989 to May 1993. Fathometers, fixed- and swept-frequency con- tinuous seismic-reflection profiling (CSP) systems, and a ground-penetrating radar (GPR) system were used with a laser-positioning system to measure the depth and extent of existing and infilled scour holes near bridge piers. Equipment was purchased commercially and modified when necessary to interface the components and (or) to improve their performance. Three 200-kHz black-and-white chart- recording Fathometers produced profiles of the riverbed that included existing scour holes and exposed pier footings. The Fathometers were used in conjunction with other geophysical techniques to help interpret the geophysical data. A 20-kHz color Fathometer delineated scour-hole geometry and, in some cases, the thickness of fill material in the hole. The signal provided subbottom information as deep as 10 ft in fine-grained materials and resolved layers of fill material as thin as 1 foot thick. Fixed-frequency and swept-frequency CSP systems were evaluated. The fixed-frequency system used a 3.5-, 7.0-, or 14-kHz signal. The 3.5-kHz signal pene- trated up to 50 ft of fine-grained material and resolved layers as thin as 2.5-ft thick. The 14-kHz signal penetrated up to 20 ft of fine-grained material and resolved layers as thin as 1-ft thick. The swept-frequency systems used a signal that swept from 2- to 16-kHz. With this system, up to 50 ft of penetration was achieved, and fill material as thin as 1 ft was resolved. Scour-hole geometry, exposed pier footings, and fill thickness in scour holes were detected with both CSP systems. The GPR system used an 80-, 100-, or 300-megahertz signal. The technique produced records in water up to 15 ft deep that had a specific conductance less than 200x11ms/cm. The 100-MHz signal penetrated up to 40 ft of resistive granular material and resolved layers as thin as 2-ft thick. Scour-hole geometry, the thickness of fill material in scour holes, and riverbed deposition were detected using this technique. Processing techniques were applied after data collection to assist with the interpretation of the data. Data were transferred from the color Fathometer, CSP, and GPR systems to a personal computer, and a commercially available software package designed to process GPR data was used to process the GPR and CSP data. Digital filtering, predictive-deconvolution, and migration algorithms were applied to some of the data. The processed data were displayed and printed as color amplitude or wiggle-trace plots. These processing methods eased and improved the interpretation of some of the data, but some interference from side echoes from bridge piers and multiple reflections remained in the data. The surface-geophysical techniques were applied at six bridge sites in Connecticut. Each site had different water depths, specific conductance, and riverbed materials. Existing and infilled scour holes, exposed pier footings, and riverbed deposition were detected by the surveys. The interpretations of the geophysical data were confirmed by comparing the data with lithologic and (or) probing data.

Comparative histometric analysis of the effects of high-intensity focused ultrasound and radiofrequency on skin.

PubMed

Suh, Dong Hye; Choi, Jeong Hwee; Lee, Sang Jun; Jeong, Ki-Heon; Song, Kye Yong; Shin, Min Kyung

2015-01-01

High-intensity focused ultrasound (HIFU) and radiofrequency (RF) are used for non-invasive skin tightening. Neocollagenesis and neoelastogenesis have been reported to have a mechanism of controlled thermal injury. To compare neocollagenesis and neoelastogenesis in each layer of the dermis after each session of HIFU and monopolar RF. We analyzed the area fraction of collagen and elastic fibers using the Masson's Trichrome and Victoria blue special stains, respectively, before and after 2 months of treatments. Histometric analyses were performed in each layer of the dermis, including the papillary dermis, and upper, mid, and deep reticular dermis. Monopolar RF led to neocollagenesis in the papillary dermis, and upper, mid, and deep reticular dermis, and neoelastogenesis in the papillary dermis, and upper and mid reticular dermis. HIFU led to neocollagenesis in the mid and deep reticular dermis and neoelastogenesis in the deep reticular dermis. Among these treatment methods, HIFU showed the highest level of neocollagenesis and neoelastogenesis in the deep reticular dermis. HIFU affects deep tissues and impacts focal regions. Monopolar RF also affects deep tissues, but impacts diffuse regions. We believe these data provide further insight into effective skin tightening.

Radio-echo sounding at Dome C, East Antarctica: A comparison of measured and modeled data

NASA Astrophysics Data System (ADS)

Winter, Anna; Eisen, Olaf; Steinhage, Daniel; Zirizzotti, Achille; Urbini, Stefano; Cavitte, Marie; Blankenship, Donald D.; Wolff, Eric

2016-04-01

The internal layering architecture of ice sheets, detected with radio-echo sounding (RES), contains clues to past ice-flow dynamics and mass balance. A common way of relating the recorded travel time of RES reflections to depth is by integrating a wave-speed distribution. This results in an increasing absolute error with depth. We present a synchronization of RES-internal layers of different radar systems (Alfred Wegener Institute, Center for Remote Sensing of Ice Sheets, Istituto Nazionale di Geofisica e Vulcanologia, British Antarctic Survey and University of Texas Institute for Geophysics) with ice-core records from the Antarctic deep drill site Dome C. Synthetic radar traces are obtained from measurements of ice-core density and conductivity with a 1D model of Maxwell's equations. The reflection peaks of the different radar systems' measurements are shifted by a wiggle-matching algorithm, so they match the synthetic trace. In this way, we matched pronounced internal reflections in the RES data to conductivity peaks with considerably smaller depth uncertainties, and assigned them with the ice-core age. We examine the differences in shifts and resolution of the different RES data to address the question of their comparability and combined analysis for an extensive age-depth distribution.

The ignition of carbon detonations via converging shock waves in white dwarfs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shen, Ken J.; Bildsten, Lars, E-mail: kenshen@astro.berkeley.edu, E-mail: bildsten@kitp.ucsb.edu

2014-04-10

The progenitor channel responsible for the majority of Type Ia supernovae is still uncertain. One emergent scenario involves the detonation of a He-rich layer surrounding a C/O white dwarf, which sends a shock wave into the core. The quasi-spherical shock wave converges and strengthens at an off-center location, forming a second, C-burning, detonation that disrupts the whole star. In this paper, we examine this second detonation of the double detonation scenario using a combination of analytic and numeric techniques. We perform a spatially resolved study of the imploding shock wave and outgoing detonation and calculate the critical imploding shock strengthsmore » needed to achieve a core C detonation. We find that He detonations in recent two-dimensional simulations yield converging shock waves that are strong enough to ignite C detonations in high-mass C/O cores, with the caveat that a truly robust answer requires multi-dimensional detonation initiation calculations. We also find that convergence-driven detonations in low-mass C/O cores and in O/Ne cores are harder to achieve and are perhaps unrealized in standard binary evolution.« less

Methane Concentrations and Biogeochemistry in Lake Sediments from Stordalen Mire, Sub-Arctic Sweden

NASA Astrophysics Data System (ADS)

Halloran, M.; DeStasio, J.; Erickson, L.; Johnson, J. E.; Varner, R. K.; Setera, J.; Prado, M. F.; Wik, M.; Crill, P. M.

2013-12-01

Lake sediments are an important global carbon sink of both allochthonous and autochthonous inputs. However, lakes are also known to emit carbon in gaseous form, most often as methane (CH4) or carbon dioxide (CO2), which are potent greenhouse gases. As northern latitudes warm, it is increasingly important to understand these gases and the sediments that store them. In July of 2013 we took 48 cores at 16 sites throughout three lakes surrounding a mire underlain by degrading permafrost in sub-arctic Sweden. The goal was to characterize the sedimentology and geochemistry of the lake sediments to better understand the production, distribution, and flux of CO2 and CH4 from these lakes. Villasjön is a shallow lake less than 1.5 meters deep, Mellan Harrsjön has a maximum depth of 7 meters and is stream-fed, and Inre Harrsjön has a maximum depth of 5 meters and is connected to Mellan Harrsjön. Published radiocarbon dates suggest that all three lakes formed approximately 3400 years ago. At each sample site, we retrieved 2 to 4 cores from the lake bottom, approximately 40-80 cm in length. The cores were sub-sampled for measurements of bulk TOC, TC, TN, TS, and CaCO3 (by difference) using a CHNS Elemental Analyzer, and grain size using a laser particle size analyzer. Headspace CO2 and CH4 by gas chromatography and infrared gas analysis (IRGA) yielded production rates and CH4 sediment concentrations. Dissolved inorganic carbon (DIC) from porewater extractions were analyzed using IRGA and stable carbon isotopes of DIC were analyzed via a Quantum Cascade Laser. The recovered sediments in the cores from all three lakes were composed of three layers: an upper layer of organic rich sediment (30-40 cm thick), a middle transition layer of mixed organic and lithogenic materials (5-10 cm thick), and a deep layer of grey lithogenic clay with less organic carbon (of variable thickness). Preliminary results from the 12 Villasjön sites indicate that CH4 is present and produced from the organic-rich layer in the upper 20-40 cm of the sediment. TOC values in this lake range from <1 to 44 wt. %. The TOC maximum (approximately 20-40 wt. %) consistently occurred at the same depth as the methane maximum, centered at ~20 cm. A TOC minimum zone (approximately 0-5 wt. %) occurs from 35-80 cm. Particle size distributions in this lake are dominated by silt and sand size fractions (>4 um). Calcium carbonate (CaCO3) concentrations varied, but the maximum always occurred in the upper 20 cm of the core. Core sites with known high lake surface methane fluxes from bubble trap measurements also show high methane concentrations in the sediment, high DIC concentrations in the pore fluids, and δ 13C signatures of CO2 ranging from 0 to 10, consistent with methanogenesis. Similar results are expected from the integration of pending sediment methane profiles with these data from the other two lakes: Mellan Harrsjön and Inre Harrsjön. Future work, including 14C dating, microbial community profiling, and δ13C signatures of CH4 will yield more insight into the biogeochemical mechanisms that regulate sediment methane distributions. 13C isotopes of methane and DIC should indicate if methane consumption through AOM or diffusion is controlling its distribution.

Hemodynamic measurements in deep brain tissues of humans by near-infrared time-resolved spectroscopy

NASA Astrophysics Data System (ADS)

Suzuki, Hiroaki; Oda, Motoki; Yamaki, Etsuko; Suzuki, Toshihiko; Yamashita, Daisuke; Yoshimoto, Kenji; Homma, Shu; Yamashita, Yutaka

2014-03-01

Using near-infrared time-resolved spectroscopy (TRS), we measured the human head in transmittance mode to obtain the optical properties, tissue oxygenation, and hemodynamics of deep brain tissues in 50 healthy adult volunteers. The right ear canal was irradiated with 3-wavelengths of pulsed light (760, 795, and 835nm), and the photons passing through the human head were collected at the left ear canal. Optical signals with sufficient intensity could be obtained from 46 of the 50 volunteers. By analyzing the temporal profiles based on the photon diffusion theory, we successfully obtained absorption coefficients for each wavelength. The levels of oxygenated hemoglobin (HbO2), deoxygenated hemoglobin (Hb), total hemoglobin (tHb), and tissue oxygen saturation (SO2) were then determined by referring to the hemoglobin spectroscopic data. Compared with the SO2 values for the forehead measurements in reflectance mode, the SO2 values of the transmittance measurements of the human head were approximately 10% lower, and tHb values of the transmittance measurements were always lower than those of the forehead reflectance measurements. Moreover, the level of hemoglobin and the SO2 were strongly correlated between the human head measurements in transmittance mode and the forehead measurements in the reflectance mode, respectively. These results demonstrated a potential application of this TRS system in examining deep brain tissues of humans.

Overturn of magma ocean ilmenite cumulate layer: Implications for lunar magmatic evolution and formation of a lunar core

NASA Technical Reports Server (NTRS)

Hess, P. C.; Parmentier, E. M.

1993-01-01

We explore a model for the chemical evolution of the lunar interior that explains the origin and evolution of lunar magmatism and possibly the existence of a lunar core. A magma ocean formed during accretion differentiates into the anorthositic crust and chemically stratified cumulate mantle. The cumulative mantle is gravitationally unstable with dense ilmenite cumulate layers overlying olivine-orthopyroxene cumulates with Fe/Mg that decreases with depth. The dense ilmenite layer sinks to the center of the moon forming the core. The remainder of the gravitationally unstable cumulate pile also overturns. Any remaining primitive lunar mantle rises to its level of neutral buoyancy in the cumulate pile. Perhaps melting of primitive lunar mantle due to this decompression results in early lunar Mg-rich magmatism. Because of its high concentration of incompatible heat producing elements, the ilmenite core heats the overlying orthopyroxene-bearing cumulates. As a conductively thickening thermal boundary layer becomes unstable, the resulting mantle plumes rise, decompress, and partially melt to generate the mare basalts. This model explains both the timing and chemical characteristics of lunar magmatism.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moldovan, Nicolaie; Divan, Ralu; Zeng, Hongjun

The design and fabrication of Fresnel zone plates for hard x-ray focusing up to 25 keV photon energies with better than 50 nm imaging half-pitch resolution is reported as performed by forming an ultrananocrystalline diamond (UNCD) scaffold, subsequently coating it with atomic layer deposition (ALD) with an absorber/phase shifting material, followed by back side etching of Si to form a diamond membrane device. The scaffold is formed by chemical vapor-deposited UNCD, electron beam lithography, and deep-reactive ion etching of diamond to desired specifications. The benefits of using diamond are as follows: improved mechanical robustness to prevent collapse of high-aspect-ratio ringmore » structures, a known high-aspect-ratio etch method, excellent radiation hardness, extremely low x-ray absorption, and significantly improved thermal/dimensional stability as compared to alternative materials. Central to the technology is the high-resolution patterning of diamond membranes at wafer scale, which was pushed to 60 nm lines and spaces etched 2.2-mu m-deep, to an aspect ratio of 36:1. The absorber growth was achieved by ALD of Ir, Pt, or W, while wafer-level processing allowed to obtain up to 121 device chips per 4 in. wafer with yields better than 60%. X-ray tests with such zone plates allowed resolving 50 nm lines and spaces, at the limit of the available resolution test structures.« less

The Characteristics of Turbidite Beds of Southwest Ryukyu Trench Floor: A new Approach From the X-ray Fluorescence Core Scanning Analysis

NASA Astrophysics Data System (ADS)

Hsiung, K. H.; Kanamatsu, T.; Ikehara, K.; Usami, K.; Saito, S.; Murayama, M.

2017-12-01

The southwest Ryukyu Trench near Taiwan is an ideal place for source-to-sink studies based on the distinctive sediment transport route between the terrestrial sediment source in Taiwan and the marine sink in the Ryukyu Trench. Using the bathymetric and seismic reflection data, we develop a sediment transport routes for understanding the ultimate sink of the southwest Ryukyu Trench floor. The southwest Ryukyu Trench floor can be regarded as the most distal depositional basin and isolated from the Ryukyu forearc basins. In addition, part of sediment from the proximal sources of the Ryukyu Islands and Yaeyama accretionary prism could be transported to the trench floor. We collected the piston core, PC04, from the southwest Ryukyu Trench floor of 6,147 m water depth in 3.23 m core length from cruise KR15-18, 2015. The coring site locates behind the natural levee of an obvious channel in the Ryukyu trench floor. The PC04 is composed of gray silty clay interbedded with numerous silt layers. Most of the silt layers are less than 2 cm in thickness. Based upon the core observation, X-ray fluorescence core scanning analysis and 14C age determinations, thirty-seven individual and thin beds were determined as turbidites. The results of X-ray fluorescence core scanning analysis provide continuous and high-resolution (1.0 mm of each point) assessment of relative change in the elemental ratios. Ca/Fe is a proxy for the terrigenous component of the sediment, indicating the High Ca and low Fe of each turbidite layers. Zr/Rb ratios of the marine sediments commonly used in the reflection of the original grain size variation. A large part of deep-sea turbidite beds are characterized by high Ca/Fe and Zr/Rb ratio values. These turbidite beds can be linked spatially over a distance of ˜200 km via submarine canyons within the Taiwan orogen. However, it is difficult to be linked temporally to certain events.

Gene structure, expression, and DNA methylation characteristics of sea cucumber cyclin B gene during aestivation.

PubMed

Zhu, Aijun; Chen, Muyan; Zhang, Xiumei; Storey, Kenneth B

2016-12-05

The sea cucumber, Apostichopus japonicus, is a good model for studying environmentally-induced aestivation by a marine invertebrate. One of the central requirements of aestivation is the repression of energy-expensive cellular processes such as cell cycle progression. The present study identified the gene structure of the cell cycle regulator, cyclin B, and detected the expression levels of this gene over three stages of the annual aestivation-arousal cycle. Furthermore, the DNA methylation characteristics of cyclin B were analyzed in non-aestivation and deep-aestivation stages of sea cucumbers. We found that the cyclin B promoter contains a CpG island, three CCAAT-boxes and three cell cycle gene homology regions (CHRs). Application of qRT-PCR analysis showed significant downregulation of cyclin B transcript levels during deep-aestivation in comparison with non-aestivation in both intestine and longitudinal muscle, and these returned to basal levels after arousal from aestivation. Methylation analysis of the cyclin B core promoter revealed that its methylation level showed significant differences between non-aestivation and deep-aestivation stages (p<0.05) and interestingly, a positive correlation between Cyclin B transcripts expression and methylation levels of the core promoter was also observed. Our findings suggest that cell cycle progression may be reversibly arrested during aestivation as indicated by the changes in cyclin B expression levels and we propose that DNA methylation is one of the regulatory mechanisms involved in cyclin B transcriptional variation. Copyright © 2016 Elsevier B.V. All rights reserved.

Recent hydrological variability and extreme precipitation events in Moroccan Middle-Atlas mountains: micro-scale analyses of lacustrine sediments

NASA Astrophysics Data System (ADS)

Jouve, Guillaume; Vidal, Laurence; Adallal, Rachid; Bard, Edouard; Benkaddour, Abdel; Chapron, Emmanuel; Courp, Thierry; Dezileau, Laurent; Hébert, Bertil; Rhoujjati, Ali; Simonneau, Anaelle; Sonzogni, Corinne; Sylvestre, Florence; Tachikawa, Kazuyo; Viry, Elisabeth

2016-04-01

Since the 1990s, the Mediterranean basin undergoes an increase in precipitation events and extreme droughts likely to intensify in the XXI century, and whose origin is attributable to human activities since 1850 (IPCC, 2013). Regional climate models indicate a strengthening of flood episodes at the end of the XXI century in Morocco (Tramblay et al, 2012). To understand recent hydrological and paleohydrological variability in North Africa, our study focuses on the macro- and micro-scale analysis of sedimentary sequences from Lake Azigza (Moroccan Middle Atlas Mountains) covering the last few centuries. This lake is relevant since local site monitoring revealed that lake water table levels were correlated with precipitation regime (Adallal R., PhD Thesis in progress). The aim of our study is to distinguish sedimentary facies characteristic of low and high lake levels, in order to reconstruct past dry and wet periods during the last two hundred years. Here, we present results from sedimentological (lithology, grain size, microstructures under thin sections), geochemical (XRF) and physical (radiography) analyses on short sedimentary cores (64 cm long) taken into the deep basin of Lake Azigza (30 meters water depth). Cores have been dated (radionuclides 210Pb, 137Cs, and 14C dating). Two main facies were distinguished: one organic-rich facies composed of wood fragments, several reworked layers and characterized by Mn peaks; and a second facies composed of terrigenous clastic sediments, without wood nor reworked layers, and characterized by Fe, Ti, Si and K peaks. The first facies is interpreted as a high lake level stand. Indeed, the highest paleoshoreline is close to the vegetation, and steeper banks can increase the current velocity, allowing the transport of wood fragments in case of extreme precipitation events. Mn peaks are interpreted as Mn oxides precipitations under well-oxygenated deep waters after runoff events. The second facies is linked to periods of increased detrital input by incising sediments during low lake levels. This interpretation is supported by chronological jumps in this facies (incoherent old 14C ages). Finally, the presence of numerous anhydrous calcium sulfates in the recent low lake level facies supports the observation of a decreasing lake level for the last decades (Flower et al., 1989; Adallal R., PhD Thesis in progress). Our study demonstrates that several lake level changes occurred during the past two hundred years, and highlights the unprecedented lake level drop since the 1980s. Bibliography Flower, R.J., Stevenson, A.C., Dearing, J.A., Foster, I.D., Airey, A., Rippey, B.,Wilson, J.P.F. & Appleby, P.G. (1989). Catchment disturbance inferred from paleolimnological studies of three contrasted sub-humid environments in Morocco. J Paleolimnol 1: 293-322. IPCC, AR 5. Climate Change (2013). The physical Science Report. Tramblay, Y., Badi, W., Driouech, F., El Adlouni, S., Neppel, L. and Servat, E. 2012. Climate change impacts on extreme precipitation in Morocco. Global and Planetary Change 82-83: 104-114.

Fusion of Deep Learning and Compressed Domain features for Content Based Image Retrieval.

PubMed

Liu, Peizhong; Guo, Jing-Ming; Wu, Chi-Yi; Cai, Danlin

2017-08-29

This paper presents an effective image retrieval method by combining high-level features from Convolutional Neural Network (CNN) model and low-level features from Dot-Diffused Block Truncation Coding (DDBTC). The low-level features, e.g., texture and color, are constructed by VQ-indexed histogram from DDBTC bitmap, maximum, and minimum quantizers. Conversely, high-level features from CNN can effectively capture human perception. With the fusion of the DDBTC and CNN features, the extended deep learning two-layer codebook features (DL-TLCF) is generated using the proposed two-layer codebook, dimension reduction, and similarity reweighting to improve the overall retrieval rate. Two metrics, average precision rate (APR) and average recall rate (ARR), are employed to examine various datasets. As documented in the experimental results, the proposed schemes can achieve superior performance compared to the state-of-the-art methods with either low- or high-level features in terms of the retrieval rate. Thus, it can be a strong candidate for various image retrieval related applications.

K-Ar age of the late Pleistocene eruption of Toba, north Sumatra

USGS Publications Warehouse

Ninkovich, D.; Shackleton, N.J.; Abdel-Monem, A. A.; Obradovich, J.D.; Izett, G.

1978-01-01

The late Pleistocene eruption of Toba is the largest magnitude explosive eruption documented from the Quaternary. K-Ar dating of the uppermost unit of the Toba Tuff gives an age of [~amp]sim; 75,000 yr. A chemically and petrographically equivalent ash layer in deep-sea cores helps calibrate the Stage 4-5 boundary of the standard oxygen isotope stratigraphy. A similar ash in Malaya that overlies finds of Tampan Palaeolithic tools indicates that they are older than 75,000 yr. ?? 1978 Nature Publishing Group.

Saliency Detection and Deep Learning-Based Wildfire Identification in UAV Imagery.

PubMed

Zhao, Yi; Ma, Jiale; Li, Xiaohui; Zhang, Jie

2018-02-27

An unmanned aerial vehicle (UAV) equipped with global positioning systems (GPS) can provide direct georeferenced imagery, mapping an area with high resolution. So far, the major difficulty in wildfire image classification is the lack of unified identification marks, the fire features of color, shape, texture (smoke, flame, or both) and background can vary significantly from one scene to another. Deep learning (e.g., DCNN for Deep Convolutional Neural Network) is very effective in high-level feature learning, however, a substantial amount of training images dataset is obligatory in optimizing its weights value and coefficients. In this work, we proposed a new saliency detection algorithm for fast location and segmentation of core fire area in aerial images. As the proposed method can effectively avoid feature loss caused by direct resizing; it is used in data augmentation and formation of a standard fire image dataset 'UAV_Fire'. A 15-layered self-learning DCNN architecture named 'Fire_Net' is then presented as a self-learning fire feature exactor and classifier. We evaluated different architectures and several key parameters (drop out ratio, batch size, etc.) of the DCNN model regarding its validation accuracy. The proposed architecture outperformed previous methods by achieving an overall accuracy of 98%. Furthermore, 'Fire_Net' guarantied an average processing speed of 41.5 ms per image for real-time wildfire inspection. To demonstrate its practical utility, Fire_Net is tested on 40 sampled images in wildfire news reports and all of them have been accurately identified.

Saliency Detection and Deep Learning-Based Wildfire Identification in UAV Imagery

PubMed Central

Zhao, Yi; Ma, Jiale; Li, Xiaohui

2018-01-01

An unmanned aerial vehicle (UAV) equipped with global positioning systems (GPS) can provide direct georeferenced imagery, mapping an area with high resolution. So far, the major difficulty in wildfire image classification is the lack of unified identification marks, the fire features of color, shape, texture (smoke, flame, or both) and background can vary significantly from one scene to another. Deep learning (e.g., DCNN for Deep Convolutional Neural Network) is very effective in high-level feature learning, however, a substantial amount of training images dataset is obligatory in optimizing its weights value and coefficients. In this work, we proposed a new saliency detection algorithm for fast location and segmentation of core fire area in aerial images. As the proposed method can effectively avoid feature loss caused by direct resizing; it is used in data augmentation and formation of a standard fire image dataset ‘UAV_Fire’. A 15-layered self-learning DCNN architecture named ‘Fire_Net’ is then presented as a self-learning fire feature exactor and classifier. We evaluated different architectures and several key parameters (drop out ratio, batch size, etc.) of the DCNN model regarding its validation accuracy. The proposed architecture outperformed previous methods by achieving an overall accuracy of 98%. Furthermore, ‘Fire_Net’ guarantied an average processing speed of 41.5 ms per image for real-time wildfire inspection. To demonstrate its practical utility, Fire_Net is tested on 40 sampled images in wildfire news reports and all of them have been accurately identified. PMID:29495504

Transparent conductive oxide films mixed with gallium oxide nanoparticle/single-walled carbon nanotube layer for deep ultraviolet light-emitting diodes

PubMed Central

2013-01-01

We propose a transparent conductive oxide electrode scheme of gallium oxide nanoparticle mixed with a single-walled carbon nanotube (Ga2O3 NP/SWNT) layer for deep ultraviolet light-emitting diodes using spin and dipping methods. We investigated the electrical, optical and morphological properties of the Ga2O3 NP/SWNT layers by increasing the thickness of SWNTs via multiple dipping processes. Compared with the undoped Ga2O3 films (current level 9.9 × 10-9 A @ 1 V, transmittance 68% @ 280 nm), the current level flowing in the Ga2O3 NP/SWNT increased by approximately 4 × 105 times and the transmittance improved by 9% after 15 times dip-coating (current level 4 × 10-4 A at 1 V; transmittance 77.0% at 280 nm). These improvements result from both native high transparency of Ga2O3 NPs and high conductivity and effective current spreading of SWNTs. PMID:24295342

Quantitative evaluation of deep and shallow tissue layers' contribution to fNIRS signal using multi-distance optodes and independent component analysis.

PubMed

Funane, Tsukasa; Atsumori, Hirokazu; Katura, Takusige; Obata, Akiko N; Sato, Hiroki; Tanikawa, Yukari; Okada, Eiji; Kiguchi, Masashi

2014-01-15

To quantify the effect of absorption changes in the deep tissue (cerebral) and shallow tissue (scalp, skin) layers on functional near-infrared spectroscopy (fNIRS) signals, a method using multi-distance (MD) optodes and independent component analysis (ICA), referred to as the MD-ICA method, is proposed. In previous studies, when the signal from the shallow tissue layer (shallow signal) needs to be eliminated, it was often assumed that the shallow signal had no correlation with the signal from the deep tissue layer (deep signal). In this study, no relationship between the waveforms of deep and shallow signals is assumed, and instead, it is assumed that both signals are linear combinations of multiple signal sources, which allows the inclusion of a "shared component" (such as systemic signals) that is contained in both layers. The method also assumes that the partial optical path length of the shallow layer does not change, whereas that of the deep layer linearly increases along with the increase of the source-detector (S-D) distance. Deep- and shallow-layer contribution ratios of each independent component (IC) are calculated using the dependence of the weight of each IC on the S-D distance. Reconstruction of deep- and shallow-layer signals are performed by the sum of ICs weighted by the deep and shallow contribution ratio. Experimental validation of the principle of this technique was conducted using a dynamic phantom with two absorbing layers. Results showed that our method is effective for evaluating deep-layer contributions even if there are high correlations between deep and shallow signals. Next, we applied the method to fNIRS signals obtained on a human head with 5-, 15-, and 30-mm S-D distances during a verbal fluency task, a verbal working memory task (prefrontal area), a finger tapping task (motor area), and a tetrametric visual checker-board task (occipital area) and then estimated the deep-layer contribution ratio. To evaluate the signal separation performance of our method, we used the correlation coefficients of a laser-Doppler flowmetry (LDF) signal and a nearest 5-mm S-D distance channel signal with the shallow signal. We demonstrated that the shallow signals have a higher temporal correlation with the LDF signals and with the 5-mm S-D distance channel than the deep signals. These results show the MD-ICA method can discriminate between deep and shallow signals. Copyright © 2013 Elsevier Inc. All rights reserved.

Mixed layer depths via Doppler lidar during low-level jet events

NASA Astrophysics Data System (ADS)

Carroll, Brian; Demoz, Belay; Bonin, Timothy; Delgado, Ruben

2018-04-01

A low-level jet (LLJ) is a prominent wind speed peak in the lower troposphere. Nocturnal LLJs have been shown to transport and mix atmospheric constituents from the residual layer down to the surface, breaching quiescent nocturnal conditions due to high wind shear. A new fuzzy logic algorithm combining turbulence and aerosol information from Doppler lidar scans can resolve the strength and depth of this mixing below the jet. Conclusions will be drawn about LLJ relations to turbulence and mixing.

Spatial extent and dissipation of the deep chlorophyll layer in Lake Ontario during the Lake Ontario lower foodweb assessment, 2003 and 2008

USGS Publications Warehouse

Watkins, J. M.; Weidel, Brian M.; Rudstam, L. G.; Holek, K. T.

2014-01-01

Increasing water clarity in Lake Ontario has led to a vertical redistribution of phytoplankton and an increased importance of the deep chlorophyll layer in overall primary productivity. We used in situ fluorometer profiles collected in lakewide surveys of Lake Ontario in 2008 to assess the spatial extent and intensity of the deep chlorophyll layer. In situ fluorometer data were corrected with extracted chlorophyll data using paired samples from Lake Ontario collected in August 2008. The deep chlorophyll layer was present offshore during the stratified conditions of late July 2008 with maximum values from 4-13 μg l-1 corrected chlorophyll a at 10 to 17 m depth within the metalimnion. Deep chlorophyll layer was closely associated with the base of the thermocline and a subsurface maximum of dissolved oxygen, indicating the feature's importance as a growth and productivity maximum. Crucial to the deep chlorophyll layer formation, the photic zone extended deeper than the surface mixed layer in mid-summer. The layer extended through most of the offshore in July 2008, but was not present in the easternmost transect that had a deeper surface mixed layer. By early September 2008, the lakewide deep chlorophyll layer had dissipated. A similar formation and dissipation was observed in the lakewide survey of Lake Ontario in 2003.

Testing the Large-scale Environments of Cool-core and Non-cool-core Clusters with Clustering Bias

NASA Astrophysics Data System (ADS)

Medezinski, Elinor; Battaglia, Nicholas; Coupon, Jean; Cen, Renyue; Gaspari, Massimo; Strauss, Michael A.; Spergel, David N.

2017-02-01

There are well-observed differences between cool-core (CC) and non-cool-core (NCC) clusters, but the origin of this distinction is still largely unknown. Competing theories can be divided into internal (inside-out), in which internal physical processes transform or maintain the NCC phase, and external (outside-in), in which the cluster type is determined by its initial conditions, which in turn leads to different formation histories (I.e., assembly bias). We propose a new method that uses the relative assembly bias of CC to NCC clusters, as determined via the two-point cluster-galaxy cross-correlation function (CCF), to test whether formation history plays a role in determining their nature. We apply our method to 48 ACCEPT clusters, which have well resolved central entropies, and cross-correlate with the SDSS-III/BOSS LOWZ galaxy catalog. We find that the relative bias of NCC over CC clusters is b = 1.42 ± 0.35 (1.6σ different from unity). Our measurement is limited by the small number of clusters with core entropy information within the BOSS footprint, 14 CC and 34 NCC clusters. Future compilations of X-ray cluster samples, combined with deep all-sky redshift surveys, will be able to better constrain the relative assembly bias of CC and NCC clusters and determine the origin of the bimodality.

Testing the Large-scale Environments of Cool-core and Non-cool-core Clusters with Clustering Bias

DOE Office of Scientific and Technical Information (OSTI.GOV)

Medezinski, Elinor; Battaglia, Nicholas; Cen, Renyue

2017-02-10

There are well-observed differences between cool-core (CC) and non-cool-core (NCC) clusters, but the origin of this distinction is still largely unknown. Competing theories can be divided into internal (inside-out), in which internal physical processes transform or maintain the NCC phase, and external (outside-in), in which the cluster type is determined by its initial conditions, which in turn leads to different formation histories (i.e., assembly bias). We propose a new method that uses the relative assembly bias of CC to NCC clusters, as determined via the two-point cluster-galaxy cross-correlation function (CCF), to test whether formation history plays a role in determiningmore » their nature. We apply our method to 48 ACCEPT clusters, which have well resolved central entropies, and cross-correlate with the SDSS-III/BOSS LOWZ galaxy catalog. We find that the relative bias of NCC over CC clusters is b = 1.42 ± 0.35 (1.6 σ different from unity). Our measurement is limited by the small number of clusters with core entropy information within the BOSS footprint, 14 CC and 34 NCC clusters. Future compilations of X-ray cluster samples, combined with deep all-sky redshift surveys, will be able to better constrain the relative assembly bias of CC and NCC clusters and determine the origin of the bimodality.« less

Task-specific feature extraction and classification of fMRI volumes using a deep neural network initialized with a deep belief network: Evaluation using sensorimotor tasks

PubMed Central

Jang, Hojin; Plis, Sergey M.; Calhoun, Vince D.; Lee, Jong-Hwan

2016-01-01

Feedforward deep neural networks (DNN), artificial neural networks with multiple hidden layers, have recently demonstrated a record-breaking performance in multiple areas of applications in computer vision and speech processing. Following the success, DNNs have been applied to neuroimaging modalities including functional/structural magnetic resonance imaging (MRI) and positron-emission tomography data. However, no study has explicitly applied DNNs to 3D whole-brain fMRI volumes and thereby extracted hidden volumetric representations of fMRI that are discriminative for a task performed as the fMRI volume was acquired. Our study applied fully connected feedforward DNN to fMRI volumes collected in four sensorimotor tasks (i.e., left-hand clenching, right-hand clenching, auditory attention, and visual stimulus) undertaken by 12 healthy participants. Using a leave-one-subject-out cross-validation scheme, a restricted Boltzmann machine-based deep belief network was pretrained and used to initialize weights of the DNN. The pretrained DNN was fine-tuned while systematically controlling weight-sparsity levels across hidden layers. Optimal weight-sparsity levels were determined from a minimum validation error rate of fMRI volume classification. Minimum error rates (mean ± standard deviation; %) of 6.9 (± 3.8) were obtained from the three-layer DNN with the sparsest condition of weights across the three hidden layers. These error rates were even lower than the error rates from the single-layer network (9.4 ± 4.6) and the two-layer network (7.4 ± 4.1). The estimated DNN weights showed spatial patterns that are remarkably task-specific, particularly in the higher layers. The output values of the third hidden layer represented distinct patterns/codes of the 3D whole-brain fMRI volume and encoded the information of the tasks as evaluated from representational similarity analysis. Our reported findings show the ability of the DNN to classify a single fMRI volume based on the extraction of hidden representations of fMRI volumes associated with tasks across multiple hidden layers. Our study may be beneficial to the automatic classification/diagnosis of neuropsychiatric and neurological diseases and prediction of disease severity and recovery in (pre-) clinical settings using fMRI volumes without requiring an estimation of activation patterns or ad hoc statistical evaluation. PMID:27079534

Task-specific feature extraction and classification of fMRI volumes using a deep neural network initialized with a deep belief network: Evaluation using sensorimotor tasks.

PubMed

Jang, Hojin; Plis, Sergey M; Calhoun, Vince D; Lee, Jong-Hwan

2017-01-15

Feedforward deep neural networks (DNNs), artificial neural networks with multiple hidden layers, have recently demonstrated a record-breaking performance in multiple areas of applications in computer vision and speech processing. Following the success, DNNs have been applied to neuroimaging modalities including functional/structural magnetic resonance imaging (MRI) and positron-emission tomography data. However, no study has explicitly applied DNNs to 3D whole-brain fMRI volumes and thereby extracted hidden volumetric representations of fMRI that are discriminative for a task performed as the fMRI volume was acquired. Our study applied fully connected feedforward DNN to fMRI volumes collected in four sensorimotor tasks (i.e., left-hand clenching, right-hand clenching, auditory attention, and visual stimulus) undertaken by 12 healthy participants. Using a leave-one-subject-out cross-validation scheme, a restricted Boltzmann machine-based deep belief network was pretrained and used to initialize weights of the DNN. The pretrained DNN was fine-tuned while systematically controlling weight-sparsity levels across hidden layers. Optimal weight-sparsity levels were determined from a minimum validation error rate of fMRI volume classification. Minimum error rates (mean±standard deviation; %) of 6.9 (±3.8) were obtained from the three-layer DNN with the sparsest condition of weights across the three hidden layers. These error rates were even lower than the error rates from the single-layer network (9.4±4.6) and the two-layer network (7.4±4.1). The estimated DNN weights showed spatial patterns that are remarkably task-specific, particularly in the higher layers. The output values of the third hidden layer represented distinct patterns/codes of the 3D whole-brain fMRI volume and encoded the information of the tasks as evaluated from representational similarity analysis. Our reported findings show the ability of the DNN to classify a single fMRI volume based on the extraction of hidden representations of fMRI volumes associated with tasks across multiple hidden layers. Our study may be beneficial to the automatic classification/diagnosis of neuropsychiatric and neurological diseases and prediction of disease severity and recovery in (pre-) clinical settings using fMRI volumes without requiring an estimation of activation patterns or ad hoc statistical evaluation. Copyright © 2016 Elsevier Inc. All rights reserved.

A white dwarf cooling age of 8 Gyr for NGC 6791 from physical separation processes.

PubMed

García-Berro, Enrique; Torres, Santiago; Althaus, Leandro G; Renedo, Isabel; Lorén-Aguilar, Pablo; Córsico, Alejandro H; Rohrmann, René D; Salaris, Maurizio; Isern, Jordi

2010-05-13

NGC 6791 is a well studied open cluster that it is so close to us that can be imaged down to very faint luminosities. The main-sequence turn-off age ( approximately 8 Gyr) and the age derived from the termination of the white dwarf cooling sequence ( approximately 6 Gyr) are very different. One possible explanation is that as white dwarfs cool, one of the ashes of helium burning, (22)Ne, sinks in the deep interior of these stars. At lower temperatures, white dwarfs are expected to crystallize and phase separation of the main constituents of the core of a typical white dwarf ((12)C and (16)O) is expected to occur. This sequence of events is expected to introduce long delays in the cooling times, but has not hitherto been proven. Here we report that, as theoretically anticipated, physical separation processes occur in the cores of white dwarfs, resolving the age discrepancy for NGC 6791.

Interfacial chemical and electronic structure of cobalt deposition on 2,7-dioctyl[1]benzothieno[3,2-b]benzothiophene (C8-BTBT)

NASA Astrophysics Data System (ADS)

Zhu, Menglong; Lyu, Lu; Niu, Dongmei; Zhang, Hong; Zhang, Yuhe; Liu, Peng; Gao, Yongli

2017-04-01

Interfacial chemical and electronic structure of Co deposition on 2,7-dioctyl[1]benzothieno[3,2-b]benzothiophene(C8-BTBT) was investigated by ultraviolet photoemission spectroscopy (UPS) and X-ray photoemission spectroscopy (XPS). Chemical reaction of cobalt with C8-BTBT at the interface is confirmed by a new component of S 2s peak which is electron-rich compared to the original one of C8-BTBT molecules. Intensity evolution of the core level in XPS indicates that the adsorption of Co atoms is mainly at the surface without deeper diffusion into C8-BTBT layer. Initial deposition of Co atoms downward shifts the core levels of C8-BTBT by electron transfer from isolated Co atoms or clusters to the C8-BTBT. Further deposition of Co upward shifts the core levels of C8-BTBT because of the neutralization of the thicker metal Co film. Our investigation suggests an inert buffer layer inserted to protect organic layer from reaction or decomposition and to lower the carrier barriers for both the electron and hole to improve the performance of Co/C8-BTBT-based OFETs.

Squeeze-SegNet: a new fast deep convolutional neural network for semantic segmentation

NASA Astrophysics Data System (ADS)

Nanfack, Geraldin; Elhassouny, Azeddine; Oulad Haj Thami, Rachid

2018-04-01

The recent researches in Deep Convolutional Neural Network have focused their attention on improving accuracy that provide significant advances. However, if they were limited to classification tasks, nowadays with contributions from Scientific Communities who are embarking in this field, they have become very useful in higher level tasks such as object detection and pixel-wise semantic segmentation. Thus, brilliant ideas in the field of semantic segmentation with deep learning have completed the state of the art of accuracy, however this architectures become very difficult to apply in embedded systems as is the case for autonomous driving. We present a new Deep fully Convolutional Neural Network for pixel-wise semantic segmentation which we call Squeeze-SegNet. The architecture is based on Encoder-Decoder style. We use a SqueezeNet-like encoder and a decoder formed by our proposed squeeze-decoder module and upsample layer using downsample indices like in SegNet and we add a deconvolution layer to provide final multi-channel feature map. On datasets like Camvid or City-states, our net gets SegNet-level accuracy with less than 10 times fewer parameters than SegNet.

Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture.

PubMed

Jothi, Raja; Balaji, S; Wuster, Arthur; Grochow, Joshua A; Gsponer, Jörg; Przytycka, Teresa M; Aravind, L; Babu, M Madan

2009-01-01

Although several studies have provided important insights into the general principles of biological networks, the link between network organization and the genome-scale dynamics of the underlying entities (genes, mRNAs, and proteins) and its role in systems behavior remain unclear. Here we show that transcription factor (TF) dynamics and regulatory network organization are tightly linked. By classifying TFs in the yeast regulatory network into three hierarchical layers (top, core, and bottom) and integrating diverse genome-scale datasets, we find that the TFs have static and dynamic properties that are similar within a layer and different across layers. At the protein level, the top-layer TFs are relatively abundant, long-lived, and noisy compared with the core- and bottom-layer TFs. Although variability in expression of top-layer TFs might confer a selective advantage, as this permits at least some members in a clonal cell population to initiate a response to changing conditions, tight regulation of the core- and bottom-layer TFs may minimize noise propagation and ensure fidelity in regulation. We propose that the interplay between network organization and TF dynamics could permit differential utilization of the same underlying network by distinct members of a clonal cell population.

Impact of the silicon substrate resistivity and growth condition on the deep levels in Ni-Au/AlN/Si MIS Capacitors

NASA Astrophysics Data System (ADS)

Wang, Chong; Simoen, Eddy; Zhao, Ming; Li, Wei

2017-10-01

Deep levels formed under different growth conditions of a 200 nm AlN buffer layer on B-doped Czochralski Si(111) substrates with different resistivity were investigated by deep-level transient spectroscopy (DLTS) on metal-insulator-semiconductor capacitors. Growth-temperature-dependent Al diffusion in the Si substrate was derived from the free carrier density obtained by capacitance-voltage measurement on samples grown on p- substrates. The DLTS spectra revealed a high concentration of point and extended defects in the p- and p+ silicon substrates, respectively. This indicated a difference in the electrically active defects in the silicon substrate close to the AlN/Si interface, depending on the B doping concentration.

Deep Coherent Vortices and Their Sea Surface Expressions

NASA Astrophysics Data System (ADS)

Ienna, Federico; Bashmachnikov, Igor; Dias, Joaquim; Peliz, Alvaro

2017-04-01

Mediterranean Water eddies, known as Meddies, are an important dynamic process occurring at depths of 1000-meters in the Northeast Atlantic Ocean. Meddies occur as a direct result of the Mediterranean Outflow exiting through the Gibraltar Strait, and represent a prevalent mechanism that can be found extensively throughout the ocean. Moreover, Meddy cores are known to produce measurable expressions at the sea surface in the form of rotating coherent vortices, not only affecting the sea surface from beneath, but also allowing for the possibility to remotely study these deep phenomena through data gathered at the sea surface. While many past studies have focused on the properties of Meddy cores, only a handful of studies focus on the physical characteristics and behavior of the surface expressions produced. Are Meddy surface expressions different from other like vortices that dominate the physical ocean surface? What are the relationships between deep and surface mechanisms, and do any feedbacks exist? To shed light on these questions, we investigate the relationship between Meddies and their sea-surface expressions through observations using in-situ float and drifter profiles and satellite altimetry. A total of 782 Meddy cores were examined in the Northeast Atlantic using temperature and salinity data obtained by CTD and Argo during the Mecanismos de transporte e de dispersão da Água Mediterrânica no Atlântico Nordeste (MEDTRANS) project, and their corresponding sea-level expressions were geo-temporally matched in satellite altimetry data. We report several statistical properties of the sea-surface expressions of Meddies, including their mean diameter and vertical magnitude, and compare the properties of their surface features to the underlying Meddy cores. We investigate how the deep core affects the surface, and whether surface expressions may in return yield information about the underlying cores. Additionally, we examine the variability of the surface expressions, including seasonal and geographical variability.

Polychlorinated biphenyls in two salt marsh sediments of the Venice Lagoon.

PubMed

Mugnai, Cristian; Giuliani, Silvia; Bellucci, Luca G; Carraro, Claudio; Favotto, Maurizio; Frignani, Mauro

2011-10-01

Polychlorinated biphenyls (PCBs) were measured in two dated salt marsh cores of the Venice Lagoon to assess their input chronology and to evaluate the importance of atmospheric deposition as a source. Sampling sites were chosen in order to evidence the differences between areas located leeward and windward with respect to inputs originating in both the city of Venice and the industrial area. Concentrations of PCB indicators (0.13-15.6 ng g⁻¹) increased gradually from the 1930s, reached maxima from the 1950s to the late 1970s, and then decreased. PCB loadings to marshes are driven by both the atmospheric deposition and the resuspension of subtidal sediments, this latter being more important for heavier congeners. The downwind marsh recorded higher fluxes (0.06-9.72 ng cm⁻² year⁻¹) than the upwind one (0.01-0.53 ng cm⁻² year⁻¹). Recent fluxes are rather consistent with bulk deposition measurements. A higher contribution of CB-101 and CB-118 was detected in the intermediate layers of the downwind site, suggesting a different PCB source for the corresponding time interval. In the other marsh, PCBs showed a rather constant composition at all levels (mostly CB-153, CB-138 and CB-180), accounting for a regional influence. Deep layers showed an enrichment of higher chlorinated congeners at both sites, whereas recent samples conserve the patterns typical of surficial and subsurficial subtidal sediments. The scientific approach adopted in this research can be considered as a sort of methodological procedure for the determination of fluxes and pathways of PCBs through the study of marsh cores.

The γ Dor stars as revealed by Kepler: A key to reveal deep-layer rotation in A and F stars

NASA Astrophysics Data System (ADS)

Salmon, S. J. A. J.; Ouazzani, R.-M.; Antoci, V.; Bedding, T. R.; Murphy, S. J.

2017-09-01

The γ Dor pulsating stars present high-order gravity modes, which make them important targets in the intermediate-and low-mass main-sequence region of the Hertzsprung-Russell diagram. Whilst we have only access to rotation in the envelope of the Sun, the g modes of γ Dor stars can in principle deliver us constraints on the inner layers. With the puzzling discovery of unexpectedly low rotation rates in the core of red giants, the γ Dor stars appear now as unique targets to explore internal angular momentum transport in the progenitors of red giants. Yet, the γ Dor pulsations remain hard to detect from the ground for their periods are close to 1 day. While the CoRoT space mission first revealed intriguing frequency spectra, the almost uninterrupted 4-year photometry from the Kepler mission eventually shed a new light on them. It revealed regularities in the spectra, expected to bear signature of physical processes, including rotation, in the shear layers close to the convective core. We present here the first results of our effort to derive exploitable seismic diagnosis for mid- to fast rotators among γ Dor stars. We confirm their potential to explore the rotation history of this early phase of stellar evolution.

Synchronizing early Eocene deep-sea and continental records - cyclostratigraphic age models for the Bighorn Basin Coring Project drill cores

NASA Astrophysics Data System (ADS)

Westerhold, Thomas; Röhl, Ursula; Wilkens, Roy H.; Gingerich, Philip D.; Clyde, William C.; Wing, Scott L.; Bowen, Gabriel J.; Kraus, Mary J.

2018-03-01

A consistent chronostratigraphic framework is required to understand the effect of major paleoclimate perturbations on both marine and terrestrial ecosystems. Transient global warming events in the early Eocene, at 56-54 Ma, show the impact of large-scale carbon input into the ocean-atmosphere system. Here we provide the first timescale synchronization of continental and marine deposits spanning the Paleocene-Eocene Thermal Maximum (PETM) and the interval just prior to the Eocene Thermal Maximum 2 (ETM-2). Cyclic variations in geochemical data come from continental drill cores of the Bighorn Basin Coring Project (BBCP, Wyoming, USA) and from marine deep-sea drilling deposits retrieved by the Ocean Drilling Program (ODP). Both are dominated by eccentricity-modulated precession cycles used to construct a common cyclostratigraphic framework. Integration of age models results in a revised astrochronology for the PETM in deep-sea records that is now generally consistent with independent 3He age models. The duration of the PETM is estimated at ˜ 200 kyr for the carbon isotope excursion and ˜ 120 kyr for the associated pelagic clay layer. A common terrestrial and marine age model shows a concurrent major change in marine and terrestrial biota ˜ 200 kyr before ETM-2. In the Bighorn Basin, the change is referred to as Biohorizon B and represents a period of significant mammalian turnover and immigration, separating the upper Haplomylus-Ectocion Range Zone from the Bunophorus Interval Zone and approximating the Wa-4-Wa-5 land mammal zone boundary. In sediments from ODP Site 1262 (Walvis Ridge), major changes in the biota at this time are documented by the radiation of a second generation of apical spine-bearing sphenolith species (e.g., S. radians and S. editus), the emergence of T. orthostylus, and the marked decline of D. multiradiatus.

Structure of Highly Sheared Tropical Storm Chantal during CAMEX-4

NASA Technical Reports Server (NTRS)

Heymsfield, G. M.; Halverson, J.; Ritchie, E.; Simpson, Joanne; Molinari, J.; Tian, L.

2006-01-01

Tropical Storm Chantal during August 2001 was a storm that failed to intensify over the few days prior to making landfall on the Yucatan Peninsula. An observational study of Tropical Storm Chantal is presented using a diverse dataset including remote and in situ measurements from the NASA ER-2 and DC-8 and the NOAA WP-3D N42RF aircraft and satellite. The authors discuss the storm structure from the larger-scale environment down to the convective scale. Large vertical shear (850-200-hPa shear magnitude range 8-15 m/s) plays a very important role in preventing Chantal from intensifying. The storm had a poorly defined vortex that only extended up to 5-6-km altitude, and an adjacent intense convective region that comprised a mesoscale convective system (MCS). The entire low-level circulation center was in the rain-free western side of the storm, about 80 km to the west-southwest of the MCS. The MCS appears to have been primarily the result of intense convergence between large-scale, low-level easterly flow with embedded downdrafts, and the cyclonic vortex flow. The individual cells in the MCS such as cell 2 during the period of the observations were extremely intense, with reflectivity core diameters of 10 km and peak updrafts exceeding 20 m/s. Associated with this MCS were two broad subsidence (warm) regions, both of which had portions over the vortex. The first layer near 700 hPa was directly above the vortex and covered most of it. The second layer near 500 hPa was along the forward and right flanks of cell 2 and undercut the anvil divergence region above. There was not much resemblance of these subsidence layers to typical upper-level warm cores in hurricanes that are necessary to support strong surface winds and a low central pressure. The observations are compared to previous studies of weakly sheared storms and modeling studies of shear effects and intensification. The configuration of the convective updrafts, low-level circulation, and lack of vertical coherence between the upper- and lower-level warming regions likely inhibited intensification of Chantal. This configuration is consistent with modeled vortices in sheared environments, which suggest the strongest convection and rain in the downshear left quadrant of the storm, and subsidence in the upshear right quadrant. The vertical shear profile is, however, different from what was assumed in previous modeling in that the winds are strongest in the lowest levels and the deep tropospheric vertical shear is on the order of 10-12 m/s.

Ab initio density functional theory study on the atomic and electronic structure of GaP/Si(001) heterointerfaces

NASA Astrophysics Data System (ADS)

Romanyuk, O.; Supplie, O.; Susi, T.; May, M. M.; Hannappel, T.

2016-10-01

The atomic and electronic band structures of GaP/Si(001) heterointerfaces were investigated by ab initio density functional theory calculations. Relative total energies of abrupt interfaces and mixed interfaces with Si substitutional sites within a few GaP layers were derived. It was found that Si diffusion into GaP layers above the first interface layer is energetically unfavorable. An interface with Si/Ga substitution sites in the first layer above the Si substrate is energetically the most stable one in thermodynamic equilibrium. The electronic band structure of the epitaxial GaP/Si(001) heterostructure terminated by the (2 ×2 ) surface reconstruction consists of surface and interface electronic states in the common band gap of two semiconductors. The dispersion of the states is anisotropic and differs for the abrupt Si-Ga, Si-P, and mixed interfaces. Ga 2 p , P 2 p , and Si 2 p core-level binding-energy shifts were computed for the abrupt and the lowest-energy heterointerface structures. Negative and positive core-level shifts due to heterovalent bonds at the interface are predicted for the abrupt Si-Ga and Si-P interfaces, respectively. The distinct features in the heterointerface electronic structure and in the core-level shifts open new perspectives in the experimental characterization of buried polar-on-nonpolar semiconductor heterointerfaces.

Models of magnetic field generation in partly stable planetary cores: Applications to Mercury and Saturn

NASA Astrophysics Data System (ADS)

Christensen, Ulrich R.; Wicht, Johannes

2008-07-01

A substantial part of Mercury's iron core may be stably stratified because the temperature gradient is subadiabatic. A dynamo would operate only in a deep sublayer. We show that such a situation arises for a wide range of values for the heat flow and the sulfur content in the core. In Saturn the upper part of the metallic hydrogen core could be stably stratified because of helium depletion. The magnetic field is unusually weak in the case of Mercury and unusually axisymmetric at Saturn. We study numerical dynamo models in rotating spherical shells with a stable outer region. The control parameters are chosen such that the magnetic Reynolds number is in the range of expected Mercury values. Because of its slow rotation, Mercury may be in a regime where the dipole contribution to the internal magnetic field is weak. Most of our models are in this regime, where the dynamo field consists mainly of rapidly varying higher multipole components. They can hardly pass the stable conducting layer because of the skin effect. The weak low-degree components vary more slowly and control the structure of the field outside the core, whose strength matches the observed field strength at Mercury. In some models the axial dipole dominates at the planet's surface and in others the axial quadrupole is dominant. Differential rotation in the stable layer, representing a thermal wind, is important for attenuating non-axisymmetric components in the exterior field. In some models that we relate to Saturn the axial dipole is intrinsically strong inside the dynamo. The surface field strength is much larger than in the other cases, but the stable layer eliminates non-axisymmetric modes. The Messenger and Bepi Colombo space missions can test our predictions that Mercury's field is large-scaled, fairly axisymmetric, and shows no secular variations on the decadal time scale.

Ti-44 Gamma-Ray Emission Lines from SN1987A Reveal an Asymmetric Explosion

NASA Technical Reports Server (NTRS)

Boggs, S. E.; Harrison, F. A.; Miyasaka, H.; Grefenstette, B. W.; Zoglauer, A.; Fryer, C. L.; Reynolds, S. P.; Alexander, D. M.; An, H.; Barret, D.;

Computations in the deep vs superficial layers of the cerebral cortex.

PubMed

Rolls, Edmund T; Mills, W Patrick C

2017-11-01

A fundamental question is how the cerebral neocortex operates functionally, computationally. The cerebral neocortex with its superficial and deep layers and highly developed recurrent collateral systems that provide a basis for memory-related processing might perform somewhat different computations in the superficial and deep layers. Here we take into account the quantitative connectivity within and between laminae. Using integrate-and-fire neuronal network simulations that incorporate this connectivity, we first show that attractor networks implemented in the deep layers that are activated by the superficial layers could be partly independent in that the deep layers might have a different time course, which might because of adaptation be more transient and useful for outputs from the neocortex. In contrast the superficial layers could implement more prolonged firing, useful for slow learning and for short-term memory. Second, we show that a different type of computation could in principle be performed in the superficial and deep layers, by showing that the superficial layers could operate as a discrete attractor network useful for categorisation and feeding information forward up a cortical hierarchy, whereas the deep layers could operate as a continuous attractor network useful for providing a spatially and temporally smooth output to output systems in the brain. A key advance is that we draw attention to the functions of the recurrent collateral connections between cortical pyramidal cells, often omitted in canonical models of the neocortex, and address principles of operation of the neocortex by which the superficial and deep layers might be specialized for different types of attractor-related memory functions implemented by the recurrent collaterals. Copyright © 2017 Elsevier Inc. All rights reserved.

First Autonomous Bio-Optical Profiling Float in the Gulf of Mexico Reveals Dynamic Biogeochemistry in Deep Waters

PubMed Central

Green, Rebecca E.; Bower, Amy S.; Lugo-Fernández, Alexis

2014-01-01

Profiling floats equipped with bio-optical sensors well complement ship-based and satellite ocean color measurements by providing highly-resolved time-series data on the vertical structure of biogeochemical processes in oceanic waters. This is the first study to employ an autonomous profiling (APEX) float in the Gulf of Mexico for measuring spatiotemporal variability in bio-optics and hydrography. During the 17-month deployment (July 2011 to December 2012), the float mission collected profiles of temperature, salinity, chlorophyll fluorescence, particulate backscattering (bbp), and colored dissolved organic matter (CDOM) fluorescence from the ocean surface to a depth of 1,500 m. Biogeochemical variability was characterized by distinct depth trends and local “hot spots”, including impacts from mesoscale processes associated with each of the water masses sampled, from ambient deep waters over the Florida Plain, into the Loop Current, up the Florida Canyon, and eventually into the Florida Straits. A deep chlorophyll maximum (DCM) occurred between 30 and 120 m, with the DCM depth significantly related to the unique density layer ρ = 1023.6 (R2 = 0.62). Particulate backscattering, bbp, demonstrated multiple peaks throughout the water column, including from phytoplankton, deep scattering layers, and resuspension. The bio-optical relationship developed between bbp and chlorophyll (R2 = 0.49) was compared to a global relationship and could significantly improve regional ocean-color algorithms. Photooxidation and autochthonous production contributed to CDOM distributions in the upper water column, whereas in deep water, CDOM behaved as a semi-conservative tracer of water masses, demonstrating a tight relationship with density (R2 = 0.87). In the wake of the Deepwater Horizon oil spill, this research lends support to the use of autonomous drifting profilers as a powerful tool for consideration in the design of an expanded and integrated observing network for the Gulf of Mexico. PMID:24992646

Theoretical surface core-level shifts for Be(0001)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Feibelman, P.J.

1994-05-15

Core-ionization potentials (CIP's) are computed for Be(0001). Three core features are observed in corresponding photoelectron spectra, with CIP's shifted relative to the bulk core level by [minus]0.825, [minus]0.570, and [minus]0.265 eV. The computed CIP shifts for the outer and subsurface layers, [minus]0.60 and [minus]0.29 eV, respectively, agree with the latter two of these. It is surmised that the [minus]0.825-eV shift is associated with a surface defect. The negative signs of the Be(0001) surface core-level shifts do not fit into the thermochemical picture widely used to explain CIP shifts. The reason is that a core-ionized Be atom is too small tomore » bond effectively to the remainder of the unrelaxed Be lattice.« less

Microbial co-occurrence patterns in deep Precambrian bedrock fracture fluids

NASA Astrophysics Data System (ADS)

Purkamo, Lotta; Bomberg, Malin; Kietäväinen, Riikka; Salavirta, Heikki; Nyyssönen, Mari; Nuppunen-Puputti, Maija; Ahonen, Lasse; Kukkonen, Ilmo; Itävaara, Merja

2016-05-01

The bacterial and archaeal community composition and the possible carbon assimilation processes and energy sources of microbial communities in oligotrophic, deep, crystalline bedrock fractures is yet to be resolved. In this study, intrinsic microbial communities from groundwater of six fracture zones from 180 to 2300 m depths in Outokumpu bedrock were characterized using high-throughput amplicon sequencing and metagenomic prediction. Comamonadaceae-, Anaerobrancaceae- and Pseudomonadaceae-related operational taxonomic units (OTUs) form the core community in deep crystalline bedrock fractures in Outokumpu. Archaeal communities were mainly composed of Methanobacteriaceae-affiliating OTUs. The predicted bacterial metagenomes showed that pathways involved in fatty acid and amino sugar metabolism were common. In addition, relative abundance of genes coding the enzymes of autotrophic carbon fixation pathways in predicted metagenomes was low. This indicates that heterotrophic carbon assimilation is more important for microbial communities of the fracture zones. Network analysis based on co-occurrence of OTUs revealed possible "keystone" genera of the microbial communities belonging to Burkholderiales and Clostridiales. Bacterial communities in fractures resemble those found in oligotrophic, hydrogen-enriched environments. Serpentinization reactions of ophiolitic rocks in Outokumpu assemblage may provide a source of energy and organic carbon compounds for the microbial communities in the fractures. Sulfate reducers and methanogens form a minority of the total microbial communities, but OTUs forming these minor groups are similar to those found in other deep Precambrian terrestrial bedrock environments.

The keystone species of Precambrian deep bedrock biosphere belong to Burkholderiales and Clostridiales

NASA Astrophysics Data System (ADS)

Purkamo, L.; Bomberg, M.; Kietäväinen, R.; Salavirta, H.; Nyyssönen, M.; Nuppunen-Puputti, M.; Ahonen, L.; Kukkonen, I.; Itävaara, M.

2015-11-01

The bacterial and archaeal community composition and the possible carbon assimilation processes and energy sources of microbial communities in oligotrophic, deep, crystalline bedrock fractures is yet to be resolved. In this study, intrinsic microbial communities from six fracture zones from 180-2300 m depths in Outokumpu bedrock were characterized using high-throughput amplicon sequencing and metagenomic prediction. Comamonadaceae-, Anaerobrancaceae- and Pseudomonadaceae-related OTUs form the core community in deep crystalline bedrock fractures in Outokumpu. Archaeal communities were mainly composed of Methanobacteraceae-affiliating OTUs. The predicted bacterial metagenomes showed that pathways involved in fatty acid and amino sugar metabolism were common. In addition, relative abundance of genes coding the enzymes of autotrophic carbon fixation pathways in predicted metagenomes was low. This indicates that heterotrophic carbon assimilation is more important for microbial communities of the fracture zones. Network analysis based on co-occurrence of OTUs revealed the keystone genera of the microbial communities belonging to Burkholderiales and Clostridiales. Bacterial communities in fractures resemble those found from oligotrophic, hydrogen-enriched environments. Serpentinization reactions of ophiolitic rocks in Outokumpu assemblage may provide a source of energy and organic carbon compounds for the microbial communities in the fractures. Sulfate reducers and methanogens form a minority of the total microbial communities, but OTUs forming these minor groups are similar to those found from other deep Precambrian terrestrial bedrock environments.

Stable microwave radiometry system for long term monitoring of deep tissue temperature

NASA Astrophysics Data System (ADS)

Stauffer, Paul R.; Rodriques, Dario B.; Salahi, Sara; Topsakal, Erdem; Oliveira, Tiago R.; Prakash, Aniruddh; D'Isidoro, Fabio; Reudink, Douglas; Snow, Brent W.; Maccarini, Paolo F.

2013-02-01

Background: There are numerous clinical applications for non-invasive monitoring of deep tissue temperature. We present the design and experimental performance of a miniature radiometric thermometry system for measuring volume average temperature of tissue regions located up to 5cm deep in the body. Methods: We constructed a miniature sensor consisting of EMI-shielded log spiral microstrip antenna with high gain onaxis and integrated high-sensitivity 1.35GHz total power radiometer with 500 MHz bandwidth. We tested performance of the radiometry system in both simulated and experimental multilayer phantom models of several intended clinical measurement sites: i) brown adipose tissue (BAT) depots within 2cm of the skin surface, ii) 3-5cm deep kidney, and iii) human brain underlying intact scalp and skull. The physical models included layers of circulating tissue-mimicking liquids controlled at different temperatures to characterize our ability to quantify small changes in target temperature at depth under normothermic surface tissues. Results: We report SAR patterns that characterize the sense region of a 2.6cm diameter receive antenna, and radiometric power measurements as a function of deep tissue temperature that quantify radiometer sensitivity. The data demonstrate: i) our ability to accurately track temperature rise in realistic tissue targets such as urine refluxed from prewarmed bladder into kidney, and 10°C drop in brain temperature underlying normothermic scalp and skull, and ii) long term accuracy and stability of +0.4°C over 4.5 hours as needed for monitoring core body temperature over extended surgery or monitoring effects of brown fat metabolism over an extended sleep/wake cycle. Conclusions: A non-invasive sensor consisting of 2.6cm diameter receive antenna and integral 1.35GHz total power radiometer has demonstrated sufficient sensitivity to track clinically significant changes in temperature of deep tissue targets underlying normothermic surface tissues for clinical applications like the detection of vesicoureteral reflux, and long term monitoring of brown fat metabolism or brain core temperature during extended surgery.

Stable Microwave Radiometry System for Long Term Monitoring of Deep Tissue Temperature.

PubMed

Stauffer, Paul R; Rodriques, Dario B; Salahi, Sara; Topsakal, Erdem; Oliveira, Tiago R; Prakash, Aniruddh; D'Isidoro, Fabio; Reudink, Douglas; Snow, Brent W; Maccarini, Paolo F

2013-02-26

There are numerous clinical applications for non-invasive monitoring of deep tissue temperature. We present the design and experimental performance of a miniature radiometric thermometry system for measuring volume average temperature of tissue regions located up to 5cm deep in the body. We constructed a miniature sensor consisting of EMI-shielded log spiral microstrip antenna with high gain on-axis and integrated high-sensitivity 1.35GHz total power radiometer with 500 MHz bandwidth. We tested performance of the radiometry system in both simulated and experimental multilayer phantom models of several intended clinical measurement sites: i) brown adipose tissue (BAT) depots within 2cm of the skin surface, ii) 3-5cm deep kidney, and iii) human brain underlying intact scalp and skull. The physical models included layers of circulating tissue-mimicking liquids controlled at different temperatures to characterize our ability to quantify small changes in target temperature at depth under normothermic surface tissues. We report SAR patterns that characterize the sense region of a 2.6cm diameter receive antenna, and radiometric power measurements as a function of deep tissue temperature that quantify radiometer sensitivity. The data demonstrate: i) our ability to accurately track temperature rise in realistic tissue targets such as urine refluxed from prewarmed bladder into kidney, and 10°C drop in brain temperature underlying normothermic scalp and skull, and ii) long term accuracy and stability of ∓0.4°C over 4.5 hours as needed for monitoring core body temperature over extended surgery or monitoring effects of brown fat metabolism over an extended sleep/wake cycle. A non-invasive sensor consisting of 2.6cm diameter receive antenna and integral 1.35GHz total power radiometer has demonstrated sufficient sensitivity to track clinically significant changes in temperature of deep tissue targets underlying normothermic surface tissues for clinical applications like the detection of vesicoureteral reflux, and long term monitoring of brown fat metabolism or brain core temperature during extended surgery.

Effects of Enhanced Thaw Depth on the Composition of Arctic Soil Organic Matter Leachate

NASA Astrophysics Data System (ADS)

Hutchings, J.; Zhang, X.; Bianchi, T. S.; Schuur, E.; Arellano, A. R.; Liu, Y.

2016-12-01

Pan-Arctic permafrost is increasingly susceptible to thaw due to the disproportionally high rate of temperature change in high latitudes. These soils contain a globally significant quantity of organic carbon that, when thawed, interacts with the modern carbon cycle. Current research has focused on atmospheric carbon fluxes and transport by rivers and streams to continental shelves, but has overlooked the lateral flux of carbon within watershed soils, which is the primary link between terrestrial and riverine ecosystems. Understanding the effects of water movement through permafrost soils on dissolved organic carbon is critical to better modelling of lateral carbon fluxes and interpreting the resulting observed riverine carbon fluxes with applications to investigations of the past, present, and future of the pan-Arctic. We conducted a laboratory leaching experiment using active layer soils from the Eight Mile Lake region of interior Alaska. Cores were sampled into surface and deep sections. Surface sections were subjected to a three-stage leaching process using artificial rain, with cores stored frozen overnight between stages (which crudely simulated freeze-thaw mechanisms). Surface leachates were sampled for analysis and the remainder percolated through deep soils using the same three-staged approach. Measurements of surface and deep leachates were selected to characterize transport-related changes to dissolved organic matter and included dissolved organic carbon, fluorescent dissolved organic matter via excitation emission matrices, and molecular composition via Fourier transform ion cyclotron resonance mass spectrometry. Primary findings from the experiment include a net retention of 2.4 to 27% of dissolved organic carbon from surface leachates in deep soils, a net release of fluorescent dissolved organic matter from deep soils that was 43 to 106% greater than surface leachates, increased hydrophobicity during stage three of leaching, and the preferential leaching of lignin- and tannin-like formulas from deep soils, consistent with fluorescence measurements.

Quaternary paleoceanography of the deep Arctic Ocean based on quantitative analysis of Ostracoda

USGS Publications Warehouse

Cronin, T. M.; Holtz, T.R.; Whatley, R.C.

1994-01-01

Ostracodes were studied from deep Arctic Ocean cores obtained during the Arctic 91 expedition of the Polarstern to the Nansen, Amundsen and Makarov Basins, the Lomonosov Ridge, Morris Jesup Rise and Yermak Plateau, in order to investigate their distribution in Arctic Ocean deep water (AODW) and apply these data to paleoceanographic reconstruction of bottom water masses during the Quaternary. Analyses of coretop assemblages from Arctic 91 boxcores indicate the following: ostracodes are common at all depths between 1000 and 4500 m, and species distribution is strongly influenced by water mass characteristics and bathymetry; quantitative analyses comparing Eurasian and Canada Basin assemblages indicate that distinct assemblages inhabit regions east and west of the Lomonosov Ridge, a barrier especially important to species living in lower AODW; deep Eurasian Basin assemblages are more similar to those living in Greenland Sea deep water (GSDW) than those in Canada Basin deep water; two upper AODW assemblages were recognized throughout the Arctic Ocean, one living between 1000 and 1500 m, and the other, having high species diversity, at 1500-3000 m. Downcore quantitative analyses of species' abundances and the squared chord distance coefficient of similarity reveals a distinct series of abundance peaks in key indicator taxa interpreted to signify the following late Quaternary deep water history of the Eurasian Basin. During the Last Glacial Maximum (LGM), a GSDW/AODW assemblage, characteristic of cold, well oxygenated deep water > 3000 m today, inhabited the Lomonosov Ridge to depths as shallow as 1000 m, perhaps indicating the influence of GSDW at mid-depths in the central Arctic Ocean. During Termination 1, a period of high organic productivity associated with a strong inflowing warm North Atlantic layer occurred. During the mid-Holocene, several key faunal events indicate a period of warming and/or enhanced flow between the Canada and Eurasian Basins. A long-term record of ostracode assemblages from kastenlot core PS2200-5 (1073 m water depth) from the Morris Jesup Rise indicates a quasi-cyclic pattern of water mass changes during the last 300 kyr. Interglacial ostracode assemblages corresponding to oxygen isotope stages 1, 5, and 7 indicate rapid changes in dissolved oxygen and productivity during glacial-interglacial transitions. ?? 1994.

High occurrence of Bathyarchaeota (MCG) in the deep-sea sediments of South China Sea quantified using newly designed PCR primers.

PubMed

Yu, Tiantian; Liang, Qianyong; Niu, Mingyang; Wang, Fengping

2017-08-01

The archaeal phylum Bathyarchaeota, which is composed of a large number of diverse lineages, is widespread and abundant in marine sediments. Environmental factors that control the distribution, abundance and evolution of this largely diversified archaeal phylum are currently unclear. In this study, a new pair of specific primers that target the major marine subgroups of bathyarchaeotal 16S rRNA genes was designed and evaluated to investigate the distribution and abundance of Bathyarchaeota in marine sediments. The abundance of Bathyarchaeota along two sediment cores from the deep-sea sediments of South China Sea (SCS, each from the Dongsha and Shenhu area) was determined. A strong correlation was found between the bathyarchaeotal abundance and the content of total organic carbon (TOC), suggesting an important role of Bathyarchaeota in organic matter remineralisation in the sediments of SCS. Furthermore, diversity analysis revealed that subgroups Bathy-2, Bathy-8 and Bathy-10 were dominant bathyarchaeotal members of the deep-sea sediments in the SCS. Bathy-8 was found predominantly within the reducing and deeper sediment layers, while Bathy-10 occurred preferentially in the oxidizing and shallower sediment layers. Our study lays a foundation for the further understanding of the ecological functions and niche differentiation of the important but not well-understood sedimentary archaeal group. © 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.

Convective transport over the central United States and its role in regional CO and ozone budgets

NASA Technical Reports Server (NTRS)

Thompson, Anne M.; Pickering, Kenneth E.; Dickerson, Russell R.; Ellis, William G., Jr.; Jacob, Daniel J.; Scala, John R.; Tao, Wei-Kuo; Mcnamara, Donna P.; Simpson, Joanne

1994-01-01

We have constructed a regional budget for boundary layer carbon monoxide over the central United States (32.5 deg - 50 deg N, 90 deg - 105 deg W), emphasizing a detailed evaluation of deep convective vertical fluxes appropriate for the month of June. Deep convective venting of the boundary layer (upward) dominates other components of the CO budget, e.g., downward convective transport, loss of CO by oxidation, anthropogenic emissions, and CO produced from oxidation of methane, isoprene, and anthropogenic nonmethane hydrocarbons (NMHCs). Calculations of deep convective venting are based on the method pf Pickering et al.(1992a) which uses a satellite-derived deep convective cloud climatology along with transport statistics from convective cloud model simulations of observed prototype squall line events. This study uses analyses of convective episodes in 1985 and 1989 and CO measurements taken during several midwestern field campaigns. Deep convective venting of the boundary layer over this moderately polluted region provides a net (upward minus downward) flux of 18.1 x 10(exp 8) kg CO/month to the free troposphere during early summer. Shallow cumulus and synoptic-scale weather systems together make a comparable contribution (total net flux 16.2 x 10(exp 8) kg CO/month). Boundary layer venting of CO with other O3 precursors leads to efficient free troposheric O3 formation. We estimate that deep convective transport of CO and other precursors over the central United States in early summer leads to a gross production of 0.66 - 1.1 Gmol O3/d in good agreement with estimates of O3 production from boundary layer venting in a continental-scale model (Jacob et al., 1993a, b). On this respect the central U.S. region acts as s `chimney' for the country, and presumably this O3 contributes to high background levels of O3 in the eastern United States and O3 export to the North Atlantic.

Antarctic Ocean Nutrient Conditions During the Last Two Glacial Cycles

NASA Astrophysics Data System (ADS)

Studer, A.; Sigman, D. M.; Martinez-Garcia, A.; Benz, V.; Winckler, G.; Kuhn, G.; Esper, O.; Lamy, F.; Jaccard, S.; Wacker, L.; Oleynik, S.; Gersonde, R.; Haug, G. H.

2014-12-01

The high concentration of the major nutrients nitrate and phosphate in the Antarctic Zone of the Southern Ocean dictates the nature of Southern Ocean ecosystems and permits these nutrients to be carried from the deep ocean into the nutrient-limited low latitudes. Incomplete nutrient consumption in the Antarctic also allows the leakage of deeply sequestered carbon dioxide (CO2) back to the atmosphere, and changes in this leakage may have driven glacial/interglacial cycles in atmospheric CO2. In a sediment core from the Pacific sector of the Antarctic Ocean, we report diatom-bound N isotope (δ15Ndb) records for total recoverable diatoms and two assemblages of diatom species. These data indicate tight coupling between the degree of nitrate consumption and Antarctic climate across the last two glacial cycles, with δ15Ndb (and thus the degree of nitrate consumption) increasing at each major Antarctic cooling event. Measurements in the same sediment core indicate that export production was reduced during ice ages, pointing to an ice age reduction in the supply of deep ocean-sourced nitrate to the Antarctic Ocean surface. The reduced export production of peak ice ages also implies a weaker winter-to-summer decline (i.e. reduced seasonality) in mixed layer nitrate concentration, providing a plausible explanation for an observed reduction in the inter-assemblage δ15Ndb difference during these coldest times. Despite the weak summertime productivity, the reduction in wintertime nitrate supply from deep waters left the Antarctic mixed layer with a low nitrate concentration, and this wintertime change also would have reduced the outgassing of CO2. Relief of light limitation fails to explain the intermediate degree of nitrate consumption that characterizes early glacial conditions, as improved light limitation coincident with reduced nitrate supply would drive nitrate consumption to completion. Thus, the data favor iron availability as the dominant control on annual Antarctic Ocean export production over glacial cycles.

Chemical stratigraphy of the Apollo 17 deep drill cores 70009-70007

NASA Technical Reports Server (NTRS)

Ehmann, W. D.; Ali, M. Z.

1977-01-01

A description is presented of an analysis of a total of 26 samples from three core segments (70009, 70008, 70007) of the Apollo 17 deep drill string. The deep drill string was taken about 700 m east of the Camelot Crater in the Taurus-Littrow region of the moon. Three core segments have been chemically characterized from the mainly coarse-grained upper portion of the deep drill string. The chemical data suggest that the entire 70007-70009 portion of the deep drill string examined was not deposited as a single unit, but was formed by several events sampling slightly different source materials which may have occurred over a relatively short period of time. According to the data from drill stem 70007, there were at least two phases of deposition. Core segment 70009 is probably derived from somewhat different source material than 70008. It seems to be a very well mixed material.

Compensation and persistent photocapacitance in homoepitaxial Sn-doped β-Ga2O3

NASA Astrophysics Data System (ADS)

Polyakov, A. Y.; Smirnov, N. B.; Shchemerov, I. V.; Gogova, D.; Tarelkin, S. A.; Pearton, S. J.

2018-03-01

The electrical properties of epitaxial β-Ga2O3 doped with Sn (1016-9 × 1018 cm-3) and grown by metalorganic chemical vapor deposition on semi-insulating β-Ga2O3 substrates are reported. Shallow donors attributable to Sn were observed only in a narrow region near the film/substrate interface and with a much lower concentration than the total Sn density. For heavily Sn doped films (Sn concentration, 9 × 1018 cm-3), the electrical properties in the top portion of the layer were determined by deep centers with a level at Ec-0.21 eV not described previously. In more lightly doped layers, the Ec-0.21 eV centers and deeper traps at Ec-0.8 eV were present, with the latter pinning the Fermi level. Low temperature photocapacitance and capacitance voltage measurements of illuminated samples indicated the presence of high densities (1017-1018 cm-3) of deep acceptors with an optical ionization threshold of 2.3 eV. Optical deep level transient spectroscopy (ODLTS) and photoinduced current transient spectroscopy (PICTS) detected electron traps at Ec-0.8 eV and Ec-1.1 eV. For lightly doped layers, the compensation of film conductivity was mostly provided by the Ec-2.3 eV acceptors. For heavily Sn doped films, deep acceptor centers possibly related to Ga vacancies were significant. The photocapacitance and the photocurrent caused by illumination at low temperatures were persistent, with an optical threshold of 1.9 eV and vanished only at temperatures of ˜400 K. The capture barrier for electrons causing the persistent photocapacitance effect was estimated from ODLTS and PICTS to be 0.25-0.35 eV.

Vertically resolved measurements of nighttime radical reservoirs in Los Angeles and their contribution to the urban radical budget.

PubMed

Young, Cora J; Washenfelder, Rebecca A; Roberts, James M; Mielke, Levi H; Osthoff, Hans D; Tsai, Catalina; Pikelnaya, Olga; Stutz, Jochen; Veres, Patrick R; Cochran, Anthony K; VandenBoer, Trevor C; Flynn, James; Grossberg, Nicole; Haman, Christine L; Lefer, Barry; Stark, Harald; Graus, Martin; de Gouw, Joost; Gilman, Jessica B; Kuster, William C; Brown, Steven S

2012-10-16

Photolabile nighttime radical reservoirs, such as nitrous acid (HONO) and nitryl chloride (ClNO(2)), contribute to the oxidizing potential of the atmosphere, particularly in early morning. We present the first vertically resolved measurements of ClNO(2), together with vertically resolved measurements of HONO. These measurements were acquired during the California Nexus (CalNex) campaign in the Los Angeles basin in spring 2010. Average profiles of ClNO(2) exhibited no significant dependence on height within the boundary layer and residual layer, although individual vertical profiles did show variability. By contrast, nitrous acid was strongly enhanced near the ground surface with much smaller concentrations aloft. These observations are consistent with a ClNO(2) source from aerosol uptake of N(2)O(5) throughout the boundary layer and a HONO source from dry deposition of NO(2) to the ground surface and subsequent chemical conversion. At ground level, daytime radical formation calculated from nighttime-accumulated HONO and ClNO(2) was approximately equal. Incorporating the different vertical distributions by integrating through the boundary and residual layers demonstrated that nighttime-accumulated ClNO(2) produced nine times as many radicals as nighttime-accumulated HONO. A comprehensive radical budget at ground level demonstrated that nighttime radical reservoirs accounted for 8% of total radicals formed and that they were the dominant radical source between sunrise and 09:00 Pacific daylight time (PDT). These data show that vertical gradients of radical precursors should be taken into account in radical budgets, particularly with respect to HONO.

Dissolved oxygen as a constraint on daytime deep scattering layer depth in the southern California current ecosystem

NASA Astrophysics Data System (ADS)

Netburn, Amanda N.; Anthony Koslow, J.

2015-10-01

Climate change-induced ocean deoxygenation is expected to exacerbate hypoxic conditions in mesopelagic waters off the coast of southern California, with potentially deleterious effects for the resident fauna. In order to understand the possible impacts that the oxygen minimum zone expansion will have on these animals, we investigated the response of the depth of the deep scattering layer (i.e., upper and lower boundaries) to natural variations in midwater oxygen concentrations, light levels, and temperature over time and space in the southern California Current Ecosystem. We found that the depth of the lower boundary of the deep scattering layer (DSL) is most strongly correlated with dissolved oxygen concentration, and irradiance and oxygen concentration are the key variables determining the upper boundary. Based on our correlations and published estimates of annual rates of change to irradiance level and hypoxic boundary, we estimated the corresponding annual rate of change of DSL depths. If past trends continue, the upper boundary is expected to shoal at a faster rate than the lower boundary, effectively widening the DSL under climate change scenarios. These results have important implications for the future of pelagic ecosystems, as a change to the distribution of mesopelagic animals could affect pelagic food webs as well as biogeochemical cycles.

Terrestrial magma ocean and core segregation in the earth

NASA Technical Reports Server (NTRS)

Ohtani, Eiji; Yurimoto, Naoyoshi

1992-01-01

According to the recent theories of formation of the earth, the outer layer of the proto-earth was molten and the terrestrial magma ocean was formed when its radius exceeded 3000 km. Core formation should have started in this magma ocean stage, since segregation of metallic iron occurs effectively by melting of the proto-earth. Therefore, interactions between magma, mantle minerals, and metallic iron in the magma ocean stage controlled the geochemistry of the mantle and core. We have studied the partitioning behaviors of elements into the silicate melt, high pressure minerals, and metallic iron under the deep upper mantle and lower mantle conditions. We employed the multi-anvil apparatus for preparing the equilibrating samples in the ranges from 16 to 27 GPa and 1700-2400 C. Both the electron probe microanalyzer (EPMA) and the Secondary Ion Mass spectrometer (SIMS) were used for analyzing the run products. We obtained the partition coefficients of various trace elements between majorite, Mg-perovskite, and liquid, and magnesiowustite, Mg-perovskite, and metallic iron. The examples of the partition coefficients of some key elements are summarized in figures, together with the previous data. We may be able to assess the origin of the mantle abundances of the elements such as transition metals by using the partitioning data obtained above. The mantle abundances of some transition metals expected by the core-mantle equilibrium under the lower mantle conditions cannot explain the observed abundance of some elements such as Mn and Ge in the mantle. Estimations of the densities of the ultrabasic magma Mg-perovskite at high pressure suggest existence of a density crossover in the deep lower mantle; flotation of Mg-perovskite occurs in the deep magma ocean under the lower mantle conditions. The observed depletion of some transition metals such as V, Cr, Mn, Fe, Co, and Ni in the mantle may be explained by the two stage process, the core-mantle equilibrium under the lower mantle conditions in the first stage, and subsequent downwards separation of the ultrabasic liquid (and magnesiowustite) and flotation of Mg-perovskite in the lower mantle.

Resolving plate structure across the seismogenic zone in Cascadia from onshore-offshore receiver function imaging

NASA Astrophysics Data System (ADS)

Audet, P.; Schaeffer, A. J.

2017-12-01

Studies of the forearc structure in the Cascadia subduction zone using teleseismic P-wave receiver function have resolved structures associated with deep fluid cycling, such as the basalt-to-eclogite reaction and fluid overpressure within the subducting oceanic crust, as well as the serpentinization of the forearc mantle wedge. Unfortunately, the updip extent of the over-pressured zone, and therefore the possible control on the transition from episodic slow slip to seismic slip, occurs offshore and is not resolved in those studies. The Cascadia Initiative (CI) has provided an opportunity to extend this work to the locked zone using teleseismic receiver functions from the deployment of a dense line of ocean-bottom seismograph stations offshore of Washington State, from the trench to the coastline. Here we calculate P-wave receiver functions using data from offshore (CI) and onshore (CAFE) broadband seismic stations. These data clearly show the various scattered phases associated with a dipping low-velocity layer that was identified in previous studies as the downgoing oceanic crust. These signals are difficult to untangle offshore because they arrive at similar times. We process receiver functions using a modified common-conversion point (CCP) stacking technique that uses a coherency filter to optimally stack images obtained from the three main scattered phases. The resulting image shows along-dip variations in the character of the seismic discontinuities associated with the top and bottom of the low-velocity layer. Combined with focal depth information of regular and low-frequency earthquakes, these variations may reflect changes in the material properties of the megathrust across the seismogenic zone in Cascadia.

Arctic Ocean Model Intercomparison Using Sound Speed

NASA Astrophysics Data System (ADS)

Dukhovskoy, D. S.; Johnson, M. A.

2002-05-01

The monthly and annual means from three Arctic ocean - sea ice climate model simulations are compared for the period 1979-1997. Sound speed is used to integrate model outputs of temperature and salinity along a section between Barrow and Franz Josef Land. A statistical approach is used to test for differences among the three models for two basic data subsets. We integrated and then analyzed an upper layer between 2 m - 50 m, and also a deep layer from 500 m to the bottom. The deep layer is characterized by low time-variability. No high-frequency signals appear in the deep layer having been filtered out in the upper layer. There is no seasonal signal in the deep layer and the monthly means insignificantly oscillate about the long-period mean. For the deep ocean the long-period mean can be considered quasi-constant, at least within the 19 year period of our analysis. Thus we assumed that the deep ocean would be the best choice for comparing the means of the model outputs. The upper (mixed) layer was chosen to contrast the deep layer dynamics. There are distinct seasonal and interannual signals in the sound speed time series in this layer. The mixed layer is a major link in the ocean - air interaction mechanism. Thus, different mean states of the upper layer in the models might cause different responses in other components of the Arctic climate system. The upper layer also strongly reflects any differences in atmosphere forcing. To compare data from the three models we have used a one-way t-test for the population mean, the Wilcoxon one-sample signed-rank test (when the requirement of normality of tested data is violated), and one-way ANOVA method and F-test to verify our hypothesis that the model outputs have the same mean sound speed. The different statistical approaches have shown that all models have different mean characteristics of the deep and upper layers of the Arctic Ocean.

Annually-resolved temperature reconstructions of the past 2000 years from Dome-Fuji, East Antarctica

NASA Astrophysics Data System (ADS)

Motizuki, Yuko; Takahashi, Kazuya; Nakai, Yoichi; Motoyama, Hideaki

2016-04-01

We present annually-resolved temperature and SST reconstructions of the past 2000 years based on water (oxygen and deuterium) isotope measurement on a shallow ice core drilled in 2010 at Dome Fuji station, East Antarctica. These time series records will be an essential contribution to the PAGES 2k project from sparse data area in Antarctica. Dome Fuji station is located on a summit of Dronning Maud Land at an altitude of 3810 m a.s.l. (above sea level) (77o19'01'' S, 39o42'12'' E) in East Antarctica. The 10 m depth mean snow temperature at Dome Fuji is -57.3oC1). The inland area around Dome Fuji has been recognized to be especially unique: The snow and ice there contain much stratospheric information. The direct evidence for this comes from tritium contents originated from the nuclear bomb tests in the 1960s; the tritium fallout at the Dome Fuji site is outstandingly high among 16 snow pit samples widely collected over Antarctica2). To date the concerned Dome Fuji ice core, we applied volcanic signature matching to transfer the West Antarctic Ice Sheet (WAIS) Divide ice core chronology constructed by annual layer counting as used in the study by Sigl et al. (2014)3). In our presentation, we confine ourselves to discuss the oscillation periodicity that we observed in the oxygen isotope record in our data: The periods of approximately 10, 20, and 200 years were found. We will present the time series analyses for this in detail, and will discuss the origin of this periodicity. References: 1) Kameda, T., Motoyama, H., Fujita, S., and Takahashi, S.: "Past temporal and spatial variability of surface mass balance at Dome Fuji", East Antarctica, by the stake method from 1995 to 2006, J. Glaciol., 54, 107-116, 2008. 2) Fourre, E., Jean-Baptiste, P., Dapoigny, A., Baumier, D., Petit, J.-R., and Jouzel, J.: "Past and recent tritium levels in Arctic and Antarctic polar caps", Earth Planet. Sc. Lett., 245, 56-64, 2006. 3) Sigl, M., J. McConnell, M. Toohey, M. Curran, S. Das, R. Edwards, E. Isaksson, K. Kawamura, S. Kipfstuhl, K. Kruger, L. Layman, O. Maselli, Y. Motizuki, H. Motoyama, D. Pasteris, M. Severi: "Insights from Antarctica on volcanic forcing during the Common Era", Nature Climate Change, 4, 693-697, 2014.

Soil organic matter mineralization of permafrost peat lands and sensitivity to temperature and lack of oxygen

NASA Astrophysics Data System (ADS)

Lamprecht, Richard E.; Diáková, Kateřina; Voigt, Carolina; Šantrůčková, Hana; Martikainen, Pertti; Biasi, Christina

2017-04-01

Globally, a significant pool of soil organic carbon (SOC) (Tarnocai et al. 2009) is stored in arctic peatlands where extensive permafrost prevents the decomposition of old soil organic matter (SOM). Vulnerability of ancient organic depositions in changing environment becomes a considerable issue in future climate models. Palsa mires, a typical cryogenic peatland type in subarctic tundra, are not only an important SOC pool but also have been reported as a source of nitrous oxide (N2O) (Marushchak et al. 2011). Microbial SOM mineralization and its sensitivity to changing environmental conditions are crucial to understand future C losses and greenhouse gas (GHG) fluxes in this abundant landform of subarctic region. The purpose of this experiment was to determine potential SOM mineralization in different layers of deep soil cores from an Arctic peatland. First, we aimed to define a response of C losses and GHG exchange rates to temperature and aerobic/anaerobic conditions in different peat layers down to the permafrost and beyond. Secondly, we sought for relations among SOM mineralization, nutrient availability and parameters of indigenous microbial community. Finally, we attempted to link the potential SOM mineralization of the different peat layers with surface GHG fluxes from a proceeding study conducted with the same, intact soil cores. Five deep peat soil cores were separated into five layers (0 20, 20 40, 40 60 cm, permafrost interface and permafrost layer). Homogenized peat was incubated in a factorial set-up of three temperatures (4, 10, and 16 °C) under aerobic and anaerobic conditions. At the beginning and the end of the total 5.5-months incubation period, we determined C and N availability, microbial biomass and potential activities of extracellular enzymes. Heterotrophic respiration (CO2), methane (CH4) and nitrous oxide (N2O) emissions were monitored weekly at the initial phase and biweekly later during the incubation. First results show that C-loss from aerobic decomposition dominated over C-loss from anaerobic decomposition with clear temperature sensitivities in different peat layers. Moreover, the peat layers showed definite patterns especially to N2O losses, less for CO2 losses. This study addresses the essential question to which extent deeper soil horizons of subarctic organic depositions contribute to the total soil GHG fluxes, and whether the nutrient availability, microbial community and environmental factors (i.e. temperature, O2 availability) constrain the SOM mineralization. REFERENCES Marushchak ME, Pitkämäki A, Koponen H, Biasi C, Seppälä M, Martikainen PJ (2011) Hot spots for nitrous oxide emissions found in different types of permafrost peatlands. Global Change Biol 17:2601-2614 Tarnocai C, Canadell JG, Schuur EAG, Kuhry P, Mazhitova G, Zimov S (2009) Soil organic carbon pools in the northern circumpolar permafrost region. Global Biogeochem Cycles 23

An In-Situ Deep-UV Optical Probe for Examining Biochemical Presence in Deep Glaciers and Sub-Glacial Lakes

NASA Astrophysics Data System (ADS)

Lane, A. L.; Behar, A.; Bhartia, R.; Conrad, P. G.; Hug, W. F.

2007-12-01

The quest to study and understand extremophiles has led to many quite different research paths in the past 30 years. One of the more difficult directions has been the study of biochemical material in deep glacial ice and in subglacial lakes. Lake Vostok in Eastern Antarctica has been perhaps the most discussed subglacial lake because of its large size (~14,000 sq km), deep location under >3700 m of overlying ice, and thick sediment bed (~200m). Once the physical conditions of the Lake were assessed, questions immediately arose about the potential existence of biological material - either extinct or possibly extant under conditions of extremely limited energy and nutrients [1-2]. To investigate the biology of Vostok, via in-situ methods, is a major issue that awaits proven techniques that will not contaminate the Lake beyond what may have occurred to date. Lake Ellsworth, in West Antarctica, also discovered by ice penetrating radar, is of significantly smaller size, but is also >3500 m below the overlying ice. It represents a wonderful opportunity to design, engineer and build in-situ delivery systems that consider bio-cleanliness approaches to enable examination of its water, sediment bed and the "roof" area accretion ice for biochemicals [3]. Our laboratory has been developing deep UV fluorescence and UV Raman instrumentation to locate and classify organic material at a variety of extremophile locations. The confluence of the measurement techniques and the engineering for high external pressure instrument shells has enabled us to design and begin prototype fabrication of a biochemical sensing probe that can be inserted into a hot-water drilled ice borehole, functioning as a local area mapper in water environments as deep as 6000 m. Real-time command and control is conducted from a surface science station. We have been using the deep Vostok ice cores at the U.S. National Ice Core Lab to validate our science and data analysis approaches with an "inverted" system that has recently generated spatially resolved spectral images of material inside the Vostok cores without extraction or disturbance to the material in the ice. We will describe the instrumentation we will have available for the British Antarctica Survey Lake Ellsworth Exploration field campaign, provide a possible operational scenario and show examples of the kinds of possible measurement results that might be obtained, based upon our Lake Vostok core studies. [1] Siegert, M.J., Tranter, M., Ellis-Evans, C.J., Priscu, J.C. & Lyons, W.B. (2003) The hydrochemistry of Lake Vostok and the potential for life in Antarctic subglacial lakes. Hydrological Processes, 17, 795-814. [2] Priscu, J.C. and B.C. Christner (2004). Earth's icy biosphere, pp. 130-145, In "Microbial Diversity and Bioprospecting", A. Bull (editor). Chap 13. ASM Press, Washington, D.C. [3] Siegert M.J., Hindmarsh, R., Corr H., Smith, A., Woodward, J., King, E., Payne, A.J., and Joughin, I.(2004) Subglacial Lake Ellsworth: a candidate for in situ exploration in West Antarctica. Geophysical Research Letters, 31 (23), L23403, 10.1029/2004GL021477.

Effects of the murine skull in optoacoustic brain microscopy.

PubMed

Kneipp, Moritz; Turner, Jake; Estrada, Héctor; Rebling, Johannes; Shoham, Shy; Razansky, Daniel

2016-01-01

Despite the great promise behind the recent introduction of optoacoustic technology into the arsenal of small-animal neuroimaging methods, a variety of acoustic and light-related effects introduced by adult murine skull severely compromise the performance of optoacoustics in transcranial imaging. As a result, high-resolution noninvasive optoacoustic microscopy studies are still limited to a thin layer of pial microvasculature, which can be effectively resolved by tight focusing of the excitation light. We examined a range of distortions introduced by an adult murine skull in transcranial optoacoustic imaging under both acoustically- and optically-determined resolution scenarios. It is shown that strong low-pass filtering characteristics of the skull may significantly deteriorate the achievable spatial resolution in deep brain imaging where no light focusing is possible. While only brain vasculature with a diameter larger than 60 µm was effectively resolved via transcranial measurements with acoustic resolution, significant improvements are seen through cranial windows and thinned skull experiments. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

All-flavour search for neutrinos from dark matter annihilations in the Milky Way with IceCube/DeepCore

DOE PAGES

Aartsen, M. G.; Abraham, K.; Ackermann, M.; ...

2016-09-28

We present the first IceCube search for a signal of dark matter annihilations in the Milky Way using all-flavour neutrino-induced particle cascades. The analysis focuses on the DeepCore sub-detector of IceCube, and uses the surrounding IceCube strings as a veto region in order to select starting events in the DeepCore volume. We use 329 live-days of data from IceCube operating in its 86-string configuration during 2011–2012. No neutrino excess is found, the final result being compatible with the background-only hypothesis. From this null result, we derive upper limits on the velocity-averaged self-annihilation cross-section, < σ A v > , formore » dark matter candidate masses ranging from 30 GeV up to 10 TeV, assuming both a cuspy and a flat-cored dark matter halo profile. For dark matter masses between 200 GeV and 10 TeV, the results improve on all previous IceCube results on < σ A v > , reaching a level of 10 - 23 cm 3 s - 1 , depending on the annihilation channel assumed, for a cusped NFW profile. The analysis demonstrates that all-flavour searches are competitive with muon channel searches despite the intrinsically worse angular resolution of cascades compared to muon tracks in IceCube.« less

All-flavour search for neutrinos from dark matter annihilations in the Milky Way with IceCube/DeepCore

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aartsen, M. G.; Abraham, K.; Ackermann, M.

We present the first IceCube search for a signal of dark matter annihilations in the Milky Way using all-flavour neutrino-induced particle cascades. The analysis focuses on the DeepCore sub-detector of IceCube, and uses the surrounding IceCube strings as a veto region in order to select starting events in the DeepCore volume. We use 329 live-days of data from IceCube operating in its 86-string configuration during 2011–2012. No neutrino excess is found, the final result being compatible with the background-only hypothesis. From this null result, we derive upper limits on the velocity-averaged self-annihilation cross-section, < σ A v > , formore » dark matter candidate masses ranging from 30 GeV up to 10 TeV, assuming both a cuspy and a flat-cored dark matter halo profile. For dark matter masses between 200 GeV and 10 TeV, the results improve on all previous IceCube results on < σ A v > , reaching a level of 10 - 23 cm 3 s - 1 , depending on the annihilation channel assumed, for a cusped NFW profile. The analysis demonstrates that all-flavour searches are competitive with muon channel searches despite the intrinsically worse angular resolution of cascades compared to muon tracks in IceCube.« less

Laminar recordings in frontal cortex suggest distinct layers for maintenance and control of working memory

PubMed Central

Bastos, André M.; Loonis, Roman; Kornblith, Simon; Lundqvist, Mikael; Miller, Earl K.

2018-01-01

All of the cerebral cortex has some degree of laminar organization. These different layers are composed of neurons with distinct connectivity patterns, embryonic origins, and molecular profiles. There are little data on the laminar specificity of cognitive functions in the frontal cortex, however. We recorded neuronal spiking/local field potentials (LFPs) using laminar probes in the frontal cortex (PMd, 8A, 8B, SMA/ACC, DLPFC, and VLPFC) of monkeys performing working memory (WM) tasks. LFP power in the gamma band (50–250 Hz) was strongest in superficial layers, and LFP power in the alpha/beta band (4–22 Hz) was strongest in deep layers. Memory delay activity, including spiking and stimulus-specific gamma bursting, was predominately in superficial layers. LFPs from superficial and deep layers were synchronized in the alpha/beta bands. This was primarily unidirectional, with alpha/beta bands in deep layers driving superficial layer activity. The phase of deep layer alpha/beta modulated superficial gamma bursting associated with WM encoding. Thus, alpha/beta rhythms in deep layers may regulate the superficial layer gamma bands and hence maintenance of the contents of WM. PMID:29339471

Laminar recordings in frontal cortex suggest distinct layers for maintenance and control of working memory.

PubMed

Bastos, André M; Loonis, Roman; Kornblith, Simon; Lundqvist, Mikael; Miller, Earl K

2018-01-30

All of the cerebral cortex has some degree of laminar organization. These different layers are composed of neurons with distinct connectivity patterns, embryonic origins, and molecular profiles. There are little data on the laminar specificity of cognitive functions in the frontal cortex, however. We recorded neuronal spiking/local field potentials (LFPs) using laminar probes in the frontal cortex (PMd, 8A, 8B, SMA/ACC, DLPFC, and VLPFC) of monkeys performing working memory (WM) tasks. LFP power in the gamma band (50-250 Hz) was strongest in superficial layers, and LFP power in the alpha/beta band (4-22 Hz) was strongest in deep layers. Memory delay activity, including spiking and stimulus-specific gamma bursting, was predominately in superficial layers. LFPs from superficial and deep layers were synchronized in the alpha/beta bands. This was primarily unidirectional, with alpha/beta bands in deep layers driving superficial layer activity. The phase of deep layer alpha/beta modulated superficial gamma bursting associated with WM encoding. Thus, alpha/beta rhythms in deep layers may regulate the superficial layer gamma bands and hence maintenance of the contents of WM. Copyright © 2018 the Author(s). Published by PNAS.

Ground ice conditions in Salluit, Northern Quebec

NASA Astrophysics Data System (ADS)

Allard, M.; Fortier, R.; Calmels, F.; Gagnon, O.; L'Hérault, E.

2011-12-01

Salluit in Northern Québec (ca. 1300 inhabitants) faces difficult ground ice conditions for its development. The village is located in a U-shaped valley, along a fjord that was deglaciated around 8000 cal BP. The post-glacial marine limit is at the current elevation of 150 m ASL. Among the mapped surficial geology units, three contain particularly ice-rich permafrost: marine clays, till and silty colluviums. A diamond drill was used to extract 10 permafrost cores down to 23 m deep. In addition, 18 shallow cores (to 5 m deep) were extracted with a portable drill. All the frozen cores were shipped to Québec city where ground ice contents were measured and cryostructures were imaged by CT-Scanning. Water contents, grain-size and pore water salinity were measured. Refraction seismic profiles were run to measure the depth to bedrock. GPR and electrical resistivity surveys helped to map ice-rich areas. Three cone penetration tests (CPT) were run in the frozen clays to depths ranging from 8 to 21 m. Maximum clay thickness is ca. 50 m deep near the shoreline. The cone penetration tests and all the cores in clays revealed large amounts of both segregated and aggradational ice (volumetric contents up to 93% over thicknesses of one meter) to depths varying between 2.5 and 4 m, below which the ice content decreases and the salinity increases (values measured up to 42 gr/L between 4.5 and 6 m deep). Chunks of organic matter buried below the actual active layer base indicate past cryoturbations under a somewhat warmer climate, most probably associated with intense frost boil action, as widely observed today. The stony till has developed large quantities of segregation ice which can be seen in larger concentrations and as thicker lenses under boulders and in matrix rich (≥ 50% sand and silt) parts of the glacial sediment. As digging for a sewage pond was undertaken in winter 2008 by blasting, the clast-influenced cryostructure of the till could be observed in cuts and in large chunks of permafrost. Volumetric ice contents between 30 and 70% were measured in the till. In addition, low lying areas where till thickness exceeds ca 5 m contain polygons with ice wedges up to 2 m wide. Colluviums on slopes laid by sheet flow have been accumulating on two sectors of the study area, the source material being eroded clay at higher elevations; these slope sediments contain alternating layers of buried organics (C-14 date of 2300 BP at base of the sequence), silt and lenses of aggradational ice. Although the surface geophysical methods (electrical resistivity,GPR) were essential for mapping ice rich permafrost, the detailed appraisal of ground ice conditions was made truly possible by drilling and extracting intact cores. The use of the Cat-scan method proved very efficient for the precise and rapid measurement of ground ice contents and for imaging cryostructures on a large number of samples, thus providing exact information on permafrost composition and for interpreting permafrost history. The Salluit study also involves climate monitoring, thermal analysis and modeling, and intense community consultations.

Species-specific patterns of diel migration into the Oxygen Minimum Zone by euphausiids in the Humboldt Current Ecosystem

NASA Astrophysics Data System (ADS)

Antezana, Tarsicio

2009-12-01

A series of stratified bongo net samples taken over a 2 day period at ca. 18°S, about 20 nm off the coast of Peru, South America, suggest species-specific patterns of diel vertical migration into the Oxygen Minimum Zone (OMZ) of the Humboldt Current Ecosystem (HCE). The OMZ was the most dramatic feature of the water column and seemed to determine the extent of migration: Stylocheiron affine migrated only to the shallow oxycline; whereas Euphausia mucronata, Euphausia eximia, Euphausia distinguenda and Euphausia tenera migrated to the core of the OMZ; and Nematoscelis gracilis to beneath the core of the OMZ. Some differences were also found in the timing and duration of the ascent and descent, and residence times in shallow and deep layers. E. mucronata, N. gracilis and E. distinguenda displayed a normal descent during sunrise, and ascent during sunset. E. eximia and E. tenera also descended during sunrise but seemed to begin their ascent earlier in the afternoon and consequently shortened their deep residence times. S. affine showed the most extended residence times at the shallow layer and the shortest vertical displacement. Day and night vertical stratification and differences in the timing of migration into and out of the OMZ of the HCE suggest a community structure based on habitat partitioning whereby species avoided co-occurrence in time and space. Species-specific patterns of vertical stratification and migratory chronology are examined with regard to body and gill sizes, feeding adaptations of euphausiids, and potential food resources at the OMZ.

Deep-level traps in lightly Si-doped n-GaN on free-standing m-oriented GaN substrates

NASA Astrophysics Data System (ADS)

Yamada, H.; Chonan, H.; Takahashi, T.; Yamada, T.; Shimizu, M.

2018-04-01

In this study, we investigated the deep-level traps in Si-doped GaN epitaxial layers by metal-organic chemical vapor deposition on c-oriented and m-oriented free-standing GaN substrates. The c-oriented and m-oriented epitaxial layers, grown at a temperature of 1000 °C and V/III ratio of 1000, contained carbon atomic concentrations of 1.7×1016 and 4.0×1015 cm-3, respectively. A hole trap was observed at about 0.89 eV above the valence band maximum by minority carrier transient spectroscopy. The trap concentrations in the c-oriented and m-oriented GaN epitaxial layers were consistent with the carbon atomic concentrations from secondary ion mass spectroscopy and the yellow luminescence intensity at 2.21 eV from photoluminescence. The trap concentrations in the m-oriented GaN epitaxial layers were lower than those in the c-oriented GaN. Two electron traps, 0.24 and 0.61 eV below the conduction band (EC) minimum, were observed in the c-oriented GaN epitaxial layer. In contrast, the m-oriented GaN epitaxial layer was free from the electron trap at EC - 0.24 eV, and the trap concentration at EC - 0.61 eV in the m-oriented GaN epitaxial layer was lower than that in the c-oriented GaN epitaxial layer. The m-oriented GaN epitaxial layer exhibited fewer hole and electron traps compared to the c-oriented GaN epitaxial layers.

Aponeurosis of the levator palpebrae superioris in Chinese subjects

PubMed Central

Pan, Er; Nie, Yun-Fei; Wang, Zhen-Jun; Peng, Li-Xia; Wu, Yan-Hong; Li, Qin

2016-01-01

Abstract An accurate understanding of the anatomy of the levator palpebrae superioris aponeurosis (LPSA) is critical for successful blepharoplasty of aponeurotic ptosis. We investigated the macroscopic and microscopic anatomy of the LPSA. This prospective live gross anatomy study enrolled 200 adult Chinese patients with bilateral mild ptosis undergoing elective blepharoplasty. Full-thick eyelid tissues and sagittal sections from the eyelid skin to the conjunctiva were examined with Masson trichrome staining or antismooth muscle actin (SMA) immunohistochemistry. Gross anatomy showed that the space between the superficial and deep layers of the LPSA could be accessed after incising the overlying superficial fascia, by retracting the white line. Adipose layers were clearly observed in 195 out of 200 patients with bilateral mild ptosis, among which 180 cases had the superficial layer connected to the uncoated adipose. Fifteen cases had the superficial layer connected to the smoothly coated layer, and 5 cases had the superficial layer directly connected to the deep loose fiber, almost without adipose. In previously untreated patients, the LPSA space was located beneath the intact orbital septum. In those with previous surgeries, it was beneath the superficial layer of the LPSA, underlying the destructed orbital septum. Cadaveric histology showed that the deep layer of the LPSA extended into the anterior layer of the tarsal plate and the superficial layer reflexed upward in continuity with the vertical orbital septum. An occult space existed between the 2 layers of the LPSA, with a smooth lining on the deep layer. The superficial layer of the LPSA was SMA-immunonegative but the deep layer was slightly immunopositive for SMA. An occult anatomic space exists between the superficial and deep layers of the LPSA, in proximity to the superior tarsal plate margin. Recognition of the more anatomically significant LPSA deep layer may help improve the aesthetic outcome of blepharoplasty. PMID:27495084

Deep-Sea Carbonate Accumulation and Surface Ocean Saturation State in the Aftermath of the Cretaceous-Paleogene extinction

NASA Astrophysics Data System (ADS)

Pruss, S. B.; Higgins, J. A.; Bush, A. M.; Leckie, R. M.; Deeg, C.; Getzin, B. L.

2016-12-01

The role of the K-Pg extinction on biogeochemical cycling has been intensively studied in recent years. However, it remains unknown how extinctions in marine pelagic calcifiers impacted carbon cycling in the ocean. Low accumulation rates of microfossils in the aftermath of the extinction have been attributed to lowered production, which triggered a reduction in carbonate delivery to the seafloor. Interestingly, although microfossil abundance is lower and foraminifera are significantly smaller than in the latest Cretaceous, carbonate accumulated on the seafloor in the earliest Paleogene even in areas that should have been below the CCD. One such deep-water site in the South Pacific (U1370) was cored during IODP Expedition 329 in November 2010. We examined 16 samples from an anomalous carbonate layer provisionally assigned to lower Paleocene planktonic foraminiferal Zones P1a and P1b that preserves benthic and planktonic foraminifera. Carbon isotope values of the benthic species Nuttalies orealis range from 1.45 to 1.95‰ VPDB in the 16 samples. The planktonic species Parasubbotina pseudobulloides was only abundant enough for analysis in 4 samples, and these values range from 1.41 to 1.91‰ VPDB. We note, as others have, that no carbon isotope gradient existed between the benthic and planktonic foraminifera during the deposition of this carbonate layer, perhaps due to reduced primary production and/or export of organic carbon. The presence of this carbonate layer in the deep ocean and its preservation of a collapsed isotopic gradient are both consistent with a reduction in the surface-to-deep water gradient in carbonate saturation state during the unusual oceanographic conditions that followed the extinction. We speculate that this was associated with a sustained reduction in surface ocean saturation state with adverse consequences for neritic carbonate producers in the aftermath of the K-T extinction.

Distribution of selenium, molybdenum and uranium in sediment cores from the Colorado River delta, Baja California, Mexico.

PubMed

Orozco-Durán, A; Daesslé, L W; Gutiérrez-Galindo, E A; Muñoz-Barbosa, A

2012-01-01

The distribution of selenium, molybdenum and uranium was studied in ~1.5 m sediment cores from the Colorado River delta, at the Colorado (CR) and Hardy (HR) riverbeds. Core HR2 showed highest Se, Mo and U concentrations at its bottom (2.3, 0.95 and 1.8 μg g(-1)) within a sandy-silt layer deposited prior to dam construction. In CR5 the highest concentrations of these elements (0.9, 1.4 and 1.7 μg g(-1) respectively) were located at the top of the core within a surface layer enriched in organic carbon. A few samples from HR2 had Se above the probable toxic effect level guidelines.

Interaction of Atmospheric Turbulence with Blade Boundary Layer Dynamics on a 5MW Wind Turbine using Blade-Boundary-Layer-Resolved CFD with hybrid URANS-LES.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vijayakumar, Ganesh; Brasseur, James; Lavely, Adam

We describe the response of the NREL 5 MW wind turbine blade boundary layer to the passage of atmospheric turbulence using blade-boundary-layer-resolved computational fluid dynamics with hybrid URANS-LES modeling.

A Deep Neural Network Model for Rainfall Estimation UsingPolarimetric WSR-88DP Radar Observations

NASA Astrophysics Data System (ADS)

Tan, H.; Chandra, C. V.; Chen, H.

2016-12-01

Rainfall estimation based on radar measurements has been an important topic for a few decades. Generally, radar rainfall estimation is conducted through parametric algorisms such as reflectivity-rainfall relation (i.e., Z-R relation). On the other hand, neural networks are developed for ground rainfall estimation based on radar measurements. This nonparametric method, which takes into account of both radar observations and rainfall measurements from ground rain gauges, has been demonstrated successfully for rainfall rate estimation. However, the neural network-based rainfall estimation is limited in practice due to the model complexity and structure, data quality, as well as different rainfall microphysics. Recently, the deep learning approach has been introduced in pattern recognition and machine learning areas. Compared to traditional neural networks, the deep learning based methodologies have larger number of hidden layers and more complex structure for data representation. Through a hierarchical learning process, the high level structured information and knowledge can be extracted automatically from low level features of the data. In this paper, we introduce a novel deep neural network model for rainfall estimation based on ground polarimetric radar measurements .The model is designed to capture the complex abstractions of radar measurements at different levels using multiple layers feature identification and extraction. The abstractions at different levels can be used independently or fused with other data resource such as satellite-based rainfall products and/or topographic data to represent the rain characteristics at certain location. In particular, the WSR-88DP radar and rain gauge data collected in Dallas - Fort Worth Metroplex and Florida are used extensively to train the model, and for demonstration purposes. Quantitative evaluation of the deep neural network based rainfall products will also be presented, which is based on an independent rain gauge network.

Pressure fluctuations beneath instability wavepackets and turbulent spots in a hypersonic boundary layer

DOE PAGES

Casper, Katya M.; Beresh, Steven J.; Schneider, Steven P.

2014-09-09

To investigate the pressure-fluctuation field beneath turbulent spots in a hypersonic boundary layer, a study was conducted on the nozzle wall of the Boeing/AFOSR Mach-6 Quiet Tunnel. Controlled disturbances were created by pulsed-glow perturbations based on the electrical breakdown of air. Under quiet-flow conditions, the nozzle-wall boundary layer remains laminar and grows very thick over the long nozzle length. This allows the development of large disturbances that can be well-resolved with high-frequency pressure transducers. A disturbance first grows into a second-mode instability wavepacket that is concentrated near its own centreline. Weaker disturbances are seen spreading from the centre. The wavesmore » grow and become nonlinear before breaking down to turbulence. The breakdown begins in the core of the packets where the wave amplitudes are largest. Second-mode waves are still evident in front of and behind the breakdown point and can be seen propagating in the spanwise direction. The turbulent core grows downstream, resulting in a spot with a classical arrowhead shape. Behind the spot, a low-pressure calmed region develops. However, the spot is not merely a localized patch of turbulence; instability waves remain an integral part. Limited measurements of naturally occurring disturbances show many similar characteristics. From the controlled disturbance measurements, the convection velocity, spanwise spreading angle, and typical pressure-fluctuation field were obtained.« less

Frequent but hidden eruptions of Adatara and Bandai volcanoes during the last 50,000 years unraveled by volcanic damlake sediments, northeast Japan

NASA Astrophysics Data System (ADS)

Kataoka, Kyoko; Nagahashi, Yoshitaka

2017-04-01

Adatara and Bandai volcanoes in the northeast Japan are very close to each other ( 18 km). Bandai volcano is well known for a large-scale debris avalanche following the phreatic eruption in AD1888 that took more than 400 fatalities. Eruptive history consists of at least 6 more debris avalanche events, 3 more phreatic eruptions, 6 lava flows, and 4 Vulcanian/sub-Plinian eruptions during the last 50,000 years revealed by subaerial proximal deposits. Whereas, the eruptive history of Adatara volcano comprises 6 Vulcanian and 5 phreatic eruptions during the last 10,000 years. The most recent eruption occurred in AD1899-1900. The studied sedimentary core (INW2012) was drilled out from Lake Inawashiro-ko, the largest dammed lake in Japan, that was formed by the 50 ka Okinajima debris avalanche event at Bandai volcano. The lake is 94 m deep, and drilling site is located at the central part of the lake ( 90 m deep). In the 28 m long core sequence, in contrast to background lake sediments deposited under a deep offshore environment, very frequent (70) intercalations of event layers are recognized. Eight types of event layers can be recognized: 1) gray muddy layer (Gm), 2) gray sandy layer (Gs), 3) brown muddy layer (Bm), 4) brown sandy layer (Bs), 5) olive-gray muddy layer, 6) pale-brown sandy layer, and 7) yellow sandy layer, and 8) 2011 earthquake-induced turbidite, based on the characteristics of sedimentary facies, petrography, grainsize, mineral assemblages (XRD) and vertical variation of chemistry (micro-XRF). There are many tephra-fall layers but most of them are extra-basinal origin, i.e., of other volcanoes than Adatara and Bandai. Gm is usually a few millimeters to centimeters thick, blue-gray color, homogenized, and finer than background sediments. Gs is accompanied with coarser subunits and thicker than Gm. Especially, Gm/Gs contain pyrite, sulfate minerals and smectite, and are characterized by high sulfur contents. Bm and Bs are 1 to 6 cm thick and are normally graded with a sharp erosive base. Fresh glass shards and organic material are commonly present. The gray units (Gm/Gs) can be correlated with muddy lahars (cohesive debris flows/mudflows) in the Sukawa River catchment of Adatara volcano. High-sulfur contents indicate syn- or post-eruptive lahars in relation with phreatic eruptions or degradation of hydrothermally altered source rocks nearby the crater. The brown units (Bm/Bs) are thicker than those of gray units that suggest more proximal origin. The fresh glass shards and chemistry of those shards in brown units are unlikely to be reworking of pre-existing old tephra deposits, and therefore the events are attributed to magmatic eruption-fed density currents from Bandai. Since depositional rates of background lake sediments are stable, the frequent eruption-related events both from Adatara and Bandai volcanoes can be well dated. These event deposits reveal unknown eruptive history of Adatara and Bandai as they were more active during the last 50,000 years than previously known. Appropriate evaluation for small-scale but high frequent eruptions and their risk assessments are necessary for Inawashiro Town (15,000 population) located at the foot/downstream of the volcanoes.

Radioactive waste management in Poland status and strategy for the future

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wlodarski, J.

1995-12-01

Site selection for a new radioactive waste repository in Poland has been started. The repository will contain low- and intermediate-level radioactive wastes and spent fuel. Superficial, shallow underground and deep underground disposal options were considered; 39 potential sites have been selected. Issues to be resolved regarding waste management in Poland are also outlined in this paper.

The synaptic pharmacology underlying sensory processing in the superior colliculus.

PubMed

Binns, K E

1999-10-01

The superior colliculus (SC) is one of the most ancient regions of the vertebrate central sensory system. In this hub afferents from several sensory pathways converge, and an extensive range of neural circuits enable primary sensory processing, multi-sensory integration and the generation of motor commands for orientation behaviours. The SC has a laminar structure and is usually considered in two parts; the superficial visual layers and the deep multi-modal/motor layers. Neurones in the superficial layers integrate visual information from the retina, cortex and other sources, while the deep layers draw together data from many cortical and sub-cortical sensory areas, including the superficial layers, to generate motor commands. Functional studies in anaesthetized subjects and in slice preparations have used pharmacological tools to probe some of the SC's interacting circuits. The studies reviewed here reveal important roles for ionotropic glutamate receptors in the mediation of sensory inputs to the SC and in transmission between the superficial and deep layers. N-methyl-D-aspartate receptors appear to have special responsibility for the temporal matching of retinal and cortical activity in the superficial layers and for the integration of multiple sensory data-streams in the deep layers. Sensory responses are shaped by intrinsic inhibitory mechanisms mediated by GABA(A) and GABA(B) receptors and influenced by nicotinic acetylcholine receptors. These sensory and motor-command activities of SC neurones are modulated by levels of arousal through extrinsic connections containing GABA, serotonin and other transmitters. It is possible to naturally stimulate many of the SC's sensory and non-sensory inputs either independently or simultaneously and this brain area is an ideal location in which to study: (a) interactions between inputs from the same sensory system; (b) the integration of inputs from several sensory systems; and (c) the influence of non-sensory systems on sensory processing.

Experimental Investigation of Reynolds Number Effects on Test Quality in a Hypersonic Expansion Tube

NASA Astrophysics Data System (ADS)

Rossmann, Tobias; Devin, Alyssa; Shi, Wen; Verhoog, Charles

2017-11-01

Reynolds number effects on test time and the temporal and spatial flow quality in a hypersonic expansion tube are explored using high-speed pressure, infrared optical, and Schlieren imaging measurements. Boundary layer models for shock tube flows are fairly well established to assist in the determination of test time and flow dimensions at typical high enthalpy test conditions. However, the application of these models needs to be more fully explored due to the unsteady expansion of turbulent boundary layers and contact regions separating dissimilar gasses present in expansion tube flows. Additionally, expansion tubes rely on the development of a steady jet with a large enough core-flow region at the exit of the acceleration tube to create a constant velocity region inside of the test section. High-speed measurements of pressure and Mach number at several locations within the expansion tube allow for the determination of an experimental x-t diagram. The comparison of the experimentally determined x-t diagram to theoretical highlights the Reynolds number dependent effects on expansion tube. Additionally, spatially resolved measurements of the Reynolds number dependent, steady core-flow in the expansion tube viewing section are shown. NSF MRI CBET #1531475, Lafayette College, McCutcheon Foundation.

Understanding the Relationships Between Lightning, Cloud Microphysics, and Airborne Radar-derived Storm Structure During Hurricane Karl (2010)

NASA Technical Reports Server (NTRS)

Reinhart, Brad; Fuelberg, Henry; Blakeslee, Richard; Mach, Douglas; Heymsfield, Andrew; Bansemer, Aaron; Durden, Stephen L.; Tanelli, Simone; Heymsfield, Gerald; Lambrigtsen, Bjorn

2013-01-01

This study explores relationships between lightning, cloud microphysics, and tropical cyclone (TC) storm structure in Hurricane Karl (16 September 2010) using data collected by the NASA DC-8 and Global Hawk (GH) aircraft during NASA's Genesis and Rapid Intensification Processes (GRIP) experiment. The research capitalizes on the unique opportunity provided by GRIP to synthesize multiple datasets from two aircraft and analyze the microphysical and kinematic properties of an electrified TC. Five coordinated flight legs through Karl by the DC-8 and GH are investigated, focusing on the inner-core region (within 50km of the storm center) where the lightning was concentrated and the aircraft were well coordinated. GRIP datasets are used to compare properties of electrified and nonelectrified inner-core regions that are related to the noninductive charging mechanism, which is widely accepted to explain the observed electric fields within thunderstorms. Three common characteristics of Karl's electrified regions are identified: 1) strong updrafts of 10-20ms21, 2) deep mixed-phase layers indicated by reflectivities.30 dBZ extending several kilometers above the freezing level, and 3) microphysical environments consisting of graupel, very small ice particles, and the inferred presence of supercooled water. These characteristics describe an environment favorable for in situ noninductive charging and, hence, TC electrification. The electrified regions in Karl's inner core are attributable to a microphysical environment that was conducive to electrification because of occasional, strong convective updrafts in the eyewall.

Shell stability and conditions analyzed using a new method of extracting shell areal density maps from spectrally resolved images of direct-drive inertial confinement fusion implosions

DOE PAGES

Johns, H. M.; Mancini, R. C.; Nagayama, T.; ...

2016-01-25

In warm target direct-drive inertial confinement fusion implosion experiments performed at the OMEGA laser facility, plastic micro-balloons doped with a titanium tracer layer in the shell and filled with deuterium gas were imploded using a low-adiabat shaped laser pulse. Continuum radiation emitted in the core is transmitted through the tracer layer and the resulting spectrum recorded with a gated multi-monochromatic x-ray imager (MMI). Titanium K-shell line absorption spectra observed in the data are due to transitions in L-shell titanium ions driven by the backlighting continuum. The MMI data consist of an array of spectrally resolved images of the implosion. Thesemore » 2-D space-resolved titanium spectral features constrain the plasma conditions and areal density of the titanium doped region of the shell. The MMI data were processed to obtain narrow-band images and space resolved spectra of titanium spectral features. Shell areal density maps, ρL(x,y), extracted using a new method using both narrow-band images and space resolved spectra are confirmed to be consistent within uncertainties. We report plasma conditions in the titanium-doped region of electron temperature (Te) = 400 ± 28 eV, electron number density (N e) = 8.5 × 10 24 ± 2.5 × 10 24 cm –3, and average areal density = 86 ± 7 mg/cm 2. Fourier analysis of areal density maps reveals shell modulations caused by hydrodynamic instability growth near the fuel-shell interface in the deceleration phase. We observe significant structure in modes l = 2–9, dominated by l = 2. We extract a target breakup fraction of 7.1 ± 1.5% from our Fourier analysis. Furthermore, a new method for estimating mix width is evaluated against existing literature and our target breakup fraction. We estimate a mix width of 10.5 ±1 μm.« less

Processes governing the temperature structure of the tropical tropopause layer (Invited)

NASA Astrophysics Data System (ADS)

Birner, T.

2013-12-01

The tropical tropopause layer (TTL) is among the most important but least understood regions of the global climate system. The TTL sets the boundary condition for atmospheric tracers entering the stratosphere. Specifically, TTL temperatures control stratospheric water vapor concentrations, which play a key role in the radiative budget of the entire stratosphere with implications for tropospheric and surface climate. The TTL shows a curious stratification structure: temperature continues to decrease beyond the level of main convective outflow (~200 hPa) up to the cold point tropopause (~100 hPa), but TTL lapse rates are smaller than in the upper troposphere. A cold point tropopause well separated from the level of main convective outflow requires TTL cooling which may be the result of: 1) the detailed radiative balance in the TTL, 2) large-scale upwelling (forced by extratropical or tropical waves), 3) the large-scale hydrostatic response aloft deep convective heating, 4) overshooting convection, 5) breaking gravity waves. All of these processes may act in isolation or combine to produce the observed TTL temperature structure. Here, a critical discussion of these processes / mechanisms and their role in lifting the cold point tropopause above the level of main convective outflow is presented. Results are based on idealized radiative-convective equilibrium model simulations, contrasting single-column with cloud-resolving simulations, as well on simulations with chemistry-climate models and reanalysis data. While all of the above processes are capable of producing a TTL-like region in isolation, their combination is found to produce important feedbacks. In particular, both water vapor and ozone are found to have strong radiative effects on TTL temperatures, highlighting important feedbacks between transport circulations setting temperatures and tracer structures and the resulting tracer structures in turn affecting temperatures.

Re-Evaluating the Geological Evidence for Late Holocene Marine Incursion Events along the Guerrero Seismic Gap on the Pacific Coast of Mexico

PubMed Central

Bianchette, Thomas A.

2016-01-01

Despite the large number of tsunamis that impact Mexico’s Pacific coast, stratigraphic studies focusing on geological impacts are scanty, making it difficult to assess the long-term risks for this vulnerable region. Surface samples and six cores were taken from Laguna Mitla near Acapulco to examine sedimentological and geochemical evidence for marine incursion events. Sediment cores collected from behind the beach barrier are dominated by intercalated layers of peat and inorganic sediments, mostly silt and clay, with little or no sand. Sand- and shell-rich clastic layers with high levels of sulfur, calcium, and strontium only occur adjacent to the relict beach ridge remnants near the center of the lagoon. With the exception of one thin fine sand layer, the absence of sand in the near-shore cores and the predominance of the terrigenous element titanium in the inorganic layers, evidently eroded from the surrounding hillslopes, suggests that these large-grained intervals do not represent episodic marine incursions, but rather were likely formed by the erosion and redeposition of older marine deposits derived from the beach ridge remnants when water levels were high. These results do not support the occurrence of a large tsunami event at Laguna Mitla during the Late Holocene. PMID:27571270

Re-Evaluating the Geological Evidence for Late Holocene Marine Incursion Events along the Guerrero Seismic Gap on the Pacific Coast of Mexico.

PubMed

Bianchette, Thomas A; McCloskey, Terrence A; Liu, Kam-Biu

2016-01-01

Despite the large number of tsunamis that impact Mexico's Pacific coast, stratigraphic studies focusing on geological impacts are scanty, making it difficult to assess the long-term risks for this vulnerable region. Surface samples and six cores were taken from Laguna Mitla near Acapulco to examine sedimentological and geochemical evidence for marine incursion events. Sediment cores collected from behind the beach barrier are dominated by intercalated layers of peat and inorganic sediments, mostly silt and clay, with little or no sand. Sand- and shell-rich clastic layers with high levels of sulfur, calcium, and strontium only occur adjacent to the relict beach ridge remnants near the center of the lagoon. With the exception of one thin fine sand layer, the absence of sand in the near-shore cores and the predominance of the terrigenous element titanium in the inorganic layers, evidently eroded from the surrounding hillslopes, suggests that these large-grained intervals do not represent episodic marine incursions, but rather were likely formed by the erosion and redeposition of older marine deposits derived from the beach ridge remnants when water levels were high. These results do not support the occurrence of a large tsunami event at Laguna Mitla during the Late Holocene.

Acute in vivo testing of a conformal polymer microelectrode array for multi-region hippocampal recordings

NASA Astrophysics Data System (ADS)

Xu, Huijing; Weltman Hirschberg, Ahuva; Scholten, Kee; Berger, Theodore William; Song, Dong; Meng, Ellis

2018-02-01

Objective. The success of a cortical prosthetic device relies upon its ability to attain resolvable spikes from many neurons in particular neural networks over long periods of time. Traditionally, lifetimes of neural recordings are greatly limited by the body’s immune response against the foreign implant which causes neuronal death and glial scarring. This immune reaction is posited to be exacerbated by micromotion between the implant, which is often rigid, and the surrounding, soft brain tissue, and attenuates the quality of recordings over time. Approach. In an attempt to minimize the foreign body response to a penetrating neural array that records from multiple brain regions, Parylene C, a flexible, biocompatible polymer was used as the substrate material for a functional, proof-of-concept neural array with a reduced elastic modulus. This probe array was designed and fabricated to have 64 electrodes positioned to match the anatomy of the rat hippocampus and allow for simultaneous recordings between two cell-body layers of interest. A dissolvable brace was used for deep-brain penetration of the flexible array. Main results. Arrays were electrochemically characterized at the benchtop, and a novel insertion technique that restricts acute insertion injury enabled accurate target placement of four, bare, flexible arrays to greater than 4 mm deep into the rat brain. Arrays were tested acutely and in vivo recordings taken intra-operatively reveal spikes in both targeted regions of the hippocampus with spike amplitudes and noise levels similar to those recorded with microwires. Histological staining of a sham array implanted for one month reveals limited astrocytic scarring and neuronal death around the implant. Significance. This work represents one of the first examples of a penetrating polymer probe array that records from individual neurons in structures that lie deep within the brain.

40Ar/39Ar ages for deep (˜3.3 km) samples from the Hawaii Scientific Drilling Project, Mauna Kea volcano, Hawaii

NASA Astrophysics Data System (ADS)

Jourdan, Fred; Sharp, Warren D.; Renne, Paul R.

2012-05-01

The Hawaii Scientific Drilling Project recovered core from a 3.5 km deep hole from the flank of Mauna Kea volcano, providing a long, essentially continuous record of the volcano's physical and petrologic development that has been used to infer the chemical and physical characteristics of the Hawaiian mantle plume. Determining a precise accumulation rate via 40Ar/39Ar dating of the shield-stage tholeiites, which constitute 95-98% of the volcano's volume is challenging. We applied40Ar/39Ar dating using laser- and furnace-heating in two laboratories (Berkeley and Curtin) to samples of two lava flows from deep in the core (˜3.3 km). All determinations yield concordant isochron ages, ranging from 612 ± 159 to 871 ± 302 ka (2σ; with P ≥ 0.90). The combined data yield an age of 681 ± 120 ka (P = 0.77) for pillow lavas near the bottom of the core. This new age, when regressed with 40Ar/39Ar isochron ages previously obtained for tholeiites higher in the core, defines a constant accumulation rate of 8.4 ± 2.6 m/ka that can be used to interpolate the ages of the tholeiites in the HSDP core with a mean uncertainty of about ±83 ka. For example at ˜3300 mbsl, the age of 664 ± 83 ka estimated from the regression diverges at the 95% confidence level from the age of 550 ka obtained from the numerical model of DePaolo and Stolper (1996). The new data have implications for the timescale of the growth of Hawaiian volcanoes, the paleomagnetic record in the core, and the dynamics of the Hawaiian mantle plume.

Ceres: Evolution and Present State

NASA Astrophysics Data System (ADS)

Castillo-Rogez, J.; McCord, T.

2007-08-01

Introduction:We consider Ceres as a prototype for planetary evolution [1]. From thermal modeling by McCord and Sotin [2, 3, 4], Ceres was inferred to have differentiated into a rocky core of hydrated silicates, and an icy outer shell. Thomas et al. [5] confirmed such a model from direct observation of Ceres's shape from Hubble Space Telescope observations, and pervious occultation measurements. McCord and Sotin [4] also suggest that Ceres could have preserved a deep ocean, especially if ammonia or some other ice melting point depressant, such as salts, was incorporated during accretion. We continue to develop thermal modeling of Ceres, using increasingly sophisticated models and new observational information in order to match the observed shape. . In particular, we investigate the evolution of the core. Approach: Our models require the following initial input: initial planetesimal temperature (after [6]); composition; time of formation with respect to Calcium-Aluminum Inclusions (CAIs); and an internal heat profile after initial accretion. Modeling begins with a porous Ceres (after [7, 8]). The rock phase has the composition of an ordinary chondrite (after [9]). Short-lived radiogenic isotopes, including 26Al and 60Fe, have initial concentrations as measured by [10, 11]. Conductive thermal evolution is computed for one-dimensional models following the approach of [4] and [12]. The silicate core evolves through hydration, then dehydration and melting stages. Currently, hydrothermal cooling is not included in our algorithm. Model Results: Conditions were present for full differentiation of Ceres if accretion time t0-CAIs was less than 7 My and/or if ammonia was accreted. For times of formation t0-CAIs shorter than 2 My, the boiling point of water was reached within a few My after accretion, and may have led to major water loss.Under these conditions, hydrothermal activity was inevitable, and might still be taking place inside Ceres. Whether a deep ocean is still present within Ceres or not depends on the initial conditions, especially the presence of ammonia. The core follows very different evolutionary paths, given the range of input values. Core evolution is most strongly affected by the time of accretion, with respect to inclusion of CAIs. With the inclusion of short-lived radioisotopes, pressure and temperature conditions in the core can lead to dehydration of the silicate phase [13], and layering of the core. An outer layer consisting of hydrated silicates, and a deep core consisting of dry silicate is the result, due to the equation of state of hydrated silicates. Explosive volcanism is expected to occur [14]. Conditions can even lead to partial differentiation of a metallic core.It is these model runs, resulting in the differentiation of Ceres's core into an outer hydrated layer, dehydrated inner layer and a tiny metallic center, that also produce the observed shape. Acknowledgement: This work was supported in part by the NASA Dawn Discovery Program under contract to the Space Science Institute by the UCLA and funded by JPL/NASA. Part of this work was performed at the Jet Propulsion Laboratory - California Institute of Technology under contract to NASA. References: [1] McCord T. B. et al. 2006. Eos 87(10). [2] McCord, T. B., Sotin, C. 2003. American Astronomical Society, DPS meeting #35, #34.17; Bull. Amer. Astron. Soc. 35, 979. [3] McCord, T., Sotin, C. 2004. 35th COSPAR Scientific Assembly. Held 18 - 25 July 2004, in Paris, France., 1148. [4] McCord, T.B., C. Sotin 2005. J. Geophys. Res., 110, E05009, doi: 10.1029/2004JE002244. 1-14. [5] Thomas, P. C., et al. 2005. Nature 437, doi: 10.1038/nature03938, 224-226. [6] Mousis O. and Alibert Y. (2005) MNRAS, 358, 188-192. [7] Leliwa-Kopystynski, J., Kossacki, K. J. 1995. Planet. Space Sci. 43, 851-861. [8] Leliwa-Kopystynski, J., Kossacki, K. J. 2000. Planet. Space Sci. 48, 727-745. [9] Wasson, J. T., Kalleymen, G. W. 1988. Phil. Trans. Roy. Soc. London A 325, 535. [10] Wasserburg, G. J., Papanastassiou, D. A. 1982. in Essays in Nuclear Astrophysics, ed. C.A. Barnes, D.D. Clayton, & D.N. Schramm (New York: Cambridge Univ. Press), 77. [11] Tachibana, S., et al. 2006. Astroph. J., 639, L87-L90, doi: 10.1086/503201. [12] Castillo et al. Submitted to Icarus. [13] Ellis D. E., Wyllie P. J. 1979. Am. Miner. 64, 41-48. [14] Wilson L. et al. (1999) MPS, 34, 541-557.

Meteorological variables associated with deep slab avalanches on persistent weak layers

USGS Publications Warehouse

Marienthal, Alex; Hendrikx, Jordy; Birkeland, Karl; Irvine, Kathryn M.

2014-01-01

Deep slab avalanches are a particularly challenging avalanche forecasting problem. These avalanches are typically difficult to trigger, yet when they are triggered they tend to propagate far and result in large and destructive avalanches. For this work we define deep slab avalanches as those that fail on persistent weak layers deeper than 0.9m (3 feet), and that occur after February 1st. We utilized a 44-year record of avalanche control and meteorological data from Bridger Bowl Ski Area to test the usefulness of meteorological variables for predicting deep slab avalanches. As in previous studies, we used data from the days preceding deep slab cycles, but we also considered meteorological metrics over the early months of the season. We utilized classification trees for our analyses. Our results showed warmer temperatures in the prior twenty-four hours and more loading over the seven days before days with deep slab avalanches on persistent weak layers. In line with previous research, extended periods of above freezing temperatures led to days with deep wet slab avalanches on persistent weak layers. Seasons with either dry or wet avalanches on deep persistent weak layers typically had drier early months, and often had some significant snow depth prior to those dry months. This paper provides insights for ski patrollers, guides, and avalanche forecasters who struggle to forecast deep slab avalanches on persistent weak layers late in the season.

A New Method of Stress Measurement Based upon Elastic Deformation of Core Sample with Stress Relief by Drilling

NASA Astrophysics Data System (ADS)

Ito, T.; Funato, A.; Tamagawa, T.; Tezuka, K.; Yabe, Y.; Abe, S.; Ishida, A.; Ogasawara, H.

2017-12-01

When rock is cored at depth by drilling, anisotropic expansion occurs with the relief of anisotropic rock stresses, resulting in a sinusoidal variation of core diameter with a period of 180 deg. in the core roll angle. The circumferential variation of core diameter is given theoretically as a function of rock stresses. These new findings can lead various ideas to estimate the rock stress from circumferential variation of core diameter measured after the core retrieving. In the simplest case when a single core sample is only available, the difference between the maximum and minimum components of rock stress in a plane perpendicular to the drilled hole can be estimated from the maximum and minimum core diameters (see the detail in, Funato and Ito, IJRMMS, 2017). The advantages of this method include, (i) much easier measurement operation than those in other in-situ or in-lab estimation methods, and (ii) applicability in high stress environment where stress measurements need pressure for packers or pumping system for the hydro-fracturing methods higher than their tolerance levels. We have successfully tested the method at deep seismogenic zones in South African gold mines, and we are going to apply it to boreholes collared at 3 km depth and intersecting a M5.5 rupture plane several hundred meters below the mine workings in the ICDP project of "Drilling into Seismogenic zones of M2.0 - M5.5 earthquakes in deep South African gold mines" (DSeis) (e.g., http://www.icdp-online.org/projects/world/africa/orkney-s-africa/details/). If several core samples with different orientation are available, all of three principal components of 3D rock stress can be estimated. To realize this, we should have several boreholes drilled in different directions in a rock mass where the stress field is considered to be uniform. It is commonly carried out to dill boreholes in different directions from a mine gallery. Even in a deep borehole drilled vertically from the ground surface, the downhole tool of rotary sidewall coring allows us to take core samples with different orientations at depths of interest from the sidewall of the vertically-drilled borehole. The theoretical relationship between the core expansion and rock stress has been verified through the examination of core samples prepared in laboratory experiments and retrieved field cores.

Breast cancer molecular subtype classification using deep features: preliminary results

NASA Astrophysics Data System (ADS)

Zhu, Zhe; Albadawy, Ehab; Saha, Ashirbani; Zhang, Jun; Harowicz, Michael R.; Mazurowski, Maciej A.

2018-02-01

Radiogenomics is a field of investigation that attempts to examine the relationship between imaging characteris- tics of cancerous lesions and their genomic composition. This could offer a noninvasive alternative to establishing genomic characteristics of tumors and aid cancer treatment planning. While deep learning has shown its supe- riority in many detection and classification tasks, breast cancer radiogenomic data suffers from a very limited number of training examples, which renders the training of the neural network for this problem directly and with no pretraining a very difficult task. In this study, we investigated an alternative deep learning approach referred to as deep features or off-the-shelf network approach to classify breast cancer molecular subtypes using breast dynamic contrast enhanced MRIs. We used the feature maps of different convolution layers and fully connected layers as features and trained support vector machines using these features for prediction. For the feature maps that have multiple layers, max-pooling was performed along each channel. We focused on distinguishing the Luminal A subtype from other subtypes. To evaluate the models, 10 fold cross-validation was performed and the final AUC was obtained by averaging the performance of all the folds. The highest average AUC obtained was 0.64 (0.95 CI: 0.57-0.71), using the feature maps of the last fully connected layer. This indicates the promise of using this approach to predict the breast cancer molecular subtypes. Since the best performance appears in the last fully connected layer, it also implies that breast cancer molecular subtypes may relate to high level image features

Trace concentration - Huge impact: Nitrate in the calcite/Eu(III) system

NASA Astrophysics Data System (ADS)

Hofmann, Sascha; Voïtchovsky, Kislon; Schmidt, Moritz; Stumpf, Thorsten

2014-01-01

The interactions of trivalent lanthanides and actinides with secondary mineral phases such as calcite is of high importance for the safety assessment of deep geological repositories for high level nuclear waste (HLW). Due to similar ionic radii, calcium-bearing mineral phases are suitable host minerals for Ln(III) and An(III) ions. Especially calcite has been proven to retain these metal ions effectively by both surface complexation and bulk incorporation. Since anionic ligands (e.g., nitrate) are omnipresent in the geological environment and due to their coordinating properties, their influence on retentive processes should not be underestimated. Nitrate is a common contaminant in most HLW forms as a result of using nitric acid in fuel reprocessing. It is also formed by microbial activity under aerobic conditions. In this study, atomic force microscopy investigations revealed a major influence of nitrate upon the surface of calcite crystals. NaNO3 causes serious modifications even in trace amounts (<10-7 M) and forms a soft surface layer of low crystallinity on top of the calcite crystal. Time-resolved laser fluorescence spectroscopy of Eu(III) showed that, within this layer, Eu(III) ions are incorporated, while losing most of their hydration shell. The results show that solid solution modelling for actinides in calcite must take into account the presence of nitrate in pore and ground waters.

Deep scattering layer migration and composition: observations from a diving saucer.

PubMed

Barham, E G

1966-03-18

The distribution of a myctophid fish and physonect siphonophores observed during dives in the Soucoupe off Baja California closely correlates with scattering layers recorded simultaneously with a 12-kcy/sec echo sounder. These organisms were observed while they were migrating vertically, and at their night and daytime levels. They are capable of rapid, extensive changes in depth.

Dopant incorporation in Al0.9Ga0.1As0.06Sb0.94 grown by molecular beam epitaxy

NASA Astrophysics Data System (ADS)

Patra, Saroj Kumar; Tran, Thanh-Nam; Vines, Lasse; Kolevatov, Ilia; Monakhov, Edouard; Fimland, Bjørn-Ove

2017-04-01

Incorporation of beryllium (Be) and tellurium (Te) dopants in epitaxially grown Al0.9Ga0.1As0.06Sb0.94 layers was investigated. Carrier concentrations and mobilities of the doped layers were obtained from room temperature Hall effect measurements, and dopant densities from secondary ion mass spectrometry depth profiling. An undoped Al0.3Ga0.7As cap layer and side wall passivation were used to reduce oxidation and improve accuracy in Hall effect measurements. The measurements on Be-doped samples revealed high doping efficiency and the carrier concentration varied linearly with dopant density up to the highest Be dopant density of 2.9 × 1019 cm-3, whereas for Te doped samples the doping efficiency was in general low and the carrier concentration saturated for Te-dopant densities above 8.0 × 1018 cm-3. The low doping efficiency in Te-doped Al0.9Ga0.1As0.06Sb0.94 layer was studied by deep-level transient spectroscopy, revealing existence of deep trap levels and related DX-centers which explains the low doping efficiency.

Dissipation in the deep interiors of Ganymede and Europa

NASA Astrophysics Data System (ADS)

Hussmann, Hauke; Shoji, Daigo; Steinbruegge, Gregor; Stark, Alexander; Sohl, Frank

2017-04-01

Jupiter's satellites are subject to strong tidal forces which result in variations of the gravitational potential and deformations of the satellites' surfaces on the diurnal tidal cycle. Tidal flexing in the deep interiors can be a significant heat source for the satellites' thermal-orbital evolution. Whereas typical structure models of Europa consist of a core, a silicate mantle, an ocean and an outer ice-I shell [1], pressures inside Ganymede are sufficient for high-pressure ice phases to occur between the silicate mantle and the ocean [2]. With current data it is unknown whether the deep interiors (i.e., Europa's silicate shell and Ganymede's silicate mantle and/or high-pressure ice layer) are dissipative. Other possibilities would be that the dissipation rates are in general very low (unlikely at least for Europa due to recent observations) or that dissipative processes are mainly occurring in the ice-I shell and/or ocean. Thus, for evaluations of the heating state of these satellites, it is important to measure the magnitude of the interior dissipation. However, observation of the interior layers such as high-pressure ice layers is more challenging than that of the surface ice-I layer. Here we suggest a method to constrain the dissipation states of the deep interiors of Ganymede and Europa by altimetry and gravity measurements from an orbiting or multi-flyby spacecraft. Tidal variations are generally described by the Love numbers k2 and h2 for the tide-induced potential variation due to internal mass redistribution and the radial surface displacement, respectively. The phase-lags of these complex numbers contain information about the rheological and dissipative states of the satellites. For the satellites we assume a decoupling of the outer ice-shell from the deep interior by a liquid subsurface water ocean. We show that, in this case, the phase-lag difference between the lags of k2 and h2 can provide information on the rheological and thermal state of the deep interiors if the viscosities of the deeper layers are small (the phase-lag difference is almost independent of the dissipation in the surface layer). In case of Ganymede, phase-lag differences can reach values of a few degrees for high-pressure ice viscosities of 1e13-1e14 Pa s (around the lower boundary at its melting temperature) and would indicate a highly dissipative state of the deep interior. In this case, in contrast to the phase lags itself, the phase-lag difference is dominated by dissipation in the high-pressure ice layer rather than dissipation within the ice-I shell. These phase lags would be detectable from spacecraft in orbit around the satellite [3]. For Europa the phase-lag difference could reach values exceeding 20 deg if the silicate mantle contains melt and phase-lag measurements could help distinguish between (1) a hot dissipative (melt-containing) silicate mantle which would in thermal equilibrium correspond to a very thin outer ice-I shell and (2) a cold deep interior implying that dissipation would mainly occur in a thick (several tens of km) outer ice-I shell. These measurements are highly relevant for ESA's Jupiter Icy Moons Explorer (JUICE) and NASA's Europa Multiple Flyby Mission, both targeted for the Jupiter system. References: [1] Schubert, G., F. Sohl and H. Hussmann 2009. Interior of Europa. In: Europa, (R.T. Pappalardo, W.B. McKinnon, K. Khurana, Eds.), University of Arizona Press, pp. 353 - 368. [2] Schubert G., J. D. Anderson, T. Spohn, and W. B. McKinnon 2004. Interior composition, structure, and dynamics of the Galilean satellites. In: F. Bagenal, T. E. Dowling, and W. B. McKinnon (eds.) Jupiter. The Planet, Satellites, and Magnetosphere, pp. 281-306. Cambridge University Press. [3] Hussmann, H., D. Shoji, G. Steinbrügge, A. Stark, F. Sohl 2016. Constraints on dissipation in the deep interiors of Ganymede and Europa from tidal phase-lags. Cel. Mech. Dyn. Astr. 126, 131 - 144.

Applying Advanced Ground-Based Remote Sensing in the Southeast Asian Maritime Continent to Characterize Regional Proficiencies in Smoke Transport Modeling

NASA Technical Reports Server (NTRS)

Campbell, James R.; Ge, Cui; Wang, Jun; Welton, Ellsworth J.; Bucholtz, Anthony; Hyer, Edward J.; Reid, Elizabeth A.; Chew, Boon Ning; Liew, Soo-Chin; Salinas, Santo V.;

Deep levels in H-irradiated GaAs1-xNx (x < 0.01) grown by molecular beam epitaxy

NASA Astrophysics Data System (ADS)

Shafi, M.; Mari, R. H.; Khatab, A.; Henini, M.; Polimeni, A.; Capizzi, M.; Hopkinson, M.

2011-12-01

Dilute nitride GaAs1-xNx layers have been grown by molecular beam epitaxy with nitrogen concentration ranging from 0.2% to 0.8%. These samples have been studied before and after hydrogen irradiation by using standard deep level transient spectroscopy (DLTS) and high resolution Laplace DLTS techniques. The activation energy, capture cross section and density of the electron traps have been estimated and compared with results obtained in N-free as-grown and H-irradiated bulk GaAs.

Jovian meterology: Large-scale moist convection without a lower boundary

NASA Technical Reports Server (NTRS)

Gierasch, P. J.

1975-01-01

It is proposed that Jupiter's cloud bands represent large scale convection whose character is determined by the phase change of water at a level where the temperature is about 275K. It is argued that there are three important layers in the atmosphere: a tropopause layer where emission to space occurs; an intermediate layer between the tropopause and the water cloud base; and the deep layer below the water cloud. All arguments are only semi-quantitative. It is pointed out that these ingredients are essential to Jovian meteorology.

Synoptic-Scale Behavior of the Extratropical Tropopause Inversion Layer

NASA Astrophysics Data System (ADS)

Pilch Kedzierski, Robin; Matthes, Katja; Bumke, Karl

2015-04-01

The Tropopause Inversion Layer (TIL) is a climatological feature of the tropopause region, characterized by enhanced static stability and strong temperature inversion in a thin layer (about 1km deep) right above the tropopause. It was discovered recently via tropopause-based averaging [Birner 2002]. The sharp static stability, temperature and wind shear gradients of the TIL theoretically shall inhibit stratosphere-troposphere exchange and influence the vertical propagation of planetary scale Rossby and small-scale gravity waves. High vertically resolved radiosonde and GPS radio occultation measurements show that the strength of the TIL is positively correlated with the tropopause height and anticyclonic conditions, and that it reaches its maximum strength in polar regions during summer [Birner 2006] [Randel and Wu, 2007 and 2010]. Our study takes advantage of the high density of vertical profiles (~2000 measurements per day, globally) measured by the COSMIC satellites (2007-present), in order to describe the synoptic-scale structures of the TIL and the differences between the seasonal climatologies from earlier studies and the real-time TIL. Also, using ERA-Interim reanalysis wind fields, we split relative vorticity into shear and curl terms and study separately their relation to TIL strength in cyclonic-anticyclonic conditions. We find that the TIL has a rich zonal structure, especially in midlatitude winter, and that its strength is instantly adjusted to the synoptic situation at near-tropopause level. The peaks of strongest TIL at midlatitude ridges in winter are stronger and much more frequent than any peaks found in polar summer. The roles of shear and curl vorticity differ substantially towards higher values of relative vorticity (both cyclonic and anticyclonic).

Time-resolved photon emission from layered turbid media

NASA Astrophysics Data System (ADS)

Hielscher, Andreas H.; Liu, Hanli; Chance, Britton; Tittel, Frank K.; Jacques, Steven L.

1996-02-01

We present numerical and experimental results of time-resolved emission profiles from various layered turbid media. Numerical solutions determined by time-resolved Monte Carlo simulations are compared with measurements on layered-tissue phantoms made from gelatin. In particular, we show that in certain cases the effects of the upper layers can be eliminated. As a practical example, these results are used to analyze in vivo measurements on the human head. This demonstrates the influence of skin, skull, and meninges on the determination of the blood oxygenation in the brain.

Active Job Monitoring in Pilots

NASA Astrophysics Data System (ADS)

Kuehn, Eileen; Fischer, Max; Giffels, Manuel; Jung, Christopher; Petzold, Andreas

2015-12-01

Recent developments in high energy physics (HEP) including multi-core jobs and multi-core pilots require data centres to gain a deep understanding of the system to monitor, design, and upgrade computing clusters. Networking is a critical component. Especially the increased usage of data federations, for example in diskless computing centres or as a fallback solution, relies on WAN connectivity and availability. The specific demands of different experiments and communities, but also the need for identification of misbehaving batch jobs, requires an active monitoring. Existing monitoring tools are not capable of measuring fine-grained information at batch job level. This complicates network-aware scheduling and optimisations. In addition, pilots add another layer of abstraction. They behave like batch systems themselves by managing and executing payloads of jobs internally. The number of real jobs being executed is unknown, as the original batch system has no access to internal information about the scheduling process inside the pilots. Therefore, the comparability of jobs and pilots for predicting run-time behaviour or network performance cannot be ensured. Hence, identifying the actual payload is important. At the GridKa Tier 1 centre a specific tool is in use that allows the monitoring of network traffic information at batch job level. This contribution presents the current monitoring approach and discusses recent efforts and importance to identify pilots and their substructures inside the batch system. It will also show how to determine monitoring data of specific jobs from identified pilots. Finally, the approach is evaluated.

High-resolution record of the Matuyama–Brunhes transition constrains the age of Javanese Homo erectus in the Sangiran dome, Indonesia

PubMed Central

Hyodo, Masayuki; Matsu'ura, Shuji; Kamishima, Yuko; Kondo, Megumi; Takeshita, Yoshihiro; Kitaba, Ikuko; Danhara, Tohru; Aziz, Fachroel; Kurniawan, Iwan; Kumai, Hisao

2011-01-01

A detailed paleomagnetic study conducted in the Sangiran area, Java, has provided a reliable age constraint on hominid fossil-bearing formations. A reverse-to-normal polarity transition marks a 7-m thick section across the Upper Tuff in the Bapang Formation. The transition has three short reversal episodes and is overlain by a thick normal polarity magnetozone that was fission-track dated to the Brunhes chron. This pattern closely resembles another high-resolution Matuyama–Brunhes (MB) transition record in an Osaka Bay marine core. In the Sangiran sediments, four successive transitional polarity fields lie just below the presumed main MB boundary. Their virtual geomagnetic poles cluster in the western South Pacific, partly overlapping the transitional virtual geomagnetic poles from Hawaiian and Canary Islands’ lavas, which have a mean 40Ar/39Ar age of 776 ± 2 ka. Thus, the polarity transition is unambiguously the MB boundary. A revised correlation of tuff layers in the Bapang Formation reveals that the hominid last occurrence and the tektite level in the Sangiran area are nearly coincident, just below the Upper Middle Tuff, which underlies the MB transition. The stratigraphic relationship of the tektite level to the MB transition in the Sangiran area is consistent with deep-sea core data that show that the meteorite impact preceded the MB reversal by about 12 ka. The MB boundary currently defines the uppermost horizon yielding Homo erectus fossils in the Sangiran area. PMID:22106291

High-resolution record of the Matuyama-Brunhes transition constrains the age of Javanese Homo erectus in the Sangiran dome, Indonesia.

PubMed

Hyodo, Masayuki; Matsu'ura, Shuji; Kamishima, Yuko; Kondo, Megumi; Takeshita, Yoshihiro; Kitaba, Ikuko; Danhara, Tohru; Aziz, Fachroel; Kurniawan, Iwan; Kumai, Hisao

2011-12-06

A detailed paleomagnetic study conducted in the Sangiran area, Java, has provided a reliable age constraint on hominid fossil-bearing formations. A reverse-to-normal polarity transition marks a 7-m thick section across the Upper Tuff in the Bapang Formation. The transition has three short reversal episodes and is overlain by a thick normal polarity magnetozone that was fission-track dated to the Brunhes chron. This pattern closely resembles another high-resolution Matuyama-Brunhes (MB) transition record in an Osaka Bay marine core. In the Sangiran sediments, four successive transitional polarity fields lie just below the presumed main MB boundary. Their virtual geomagnetic poles cluster in the western South Pacific, partly overlapping the transitional virtual geomagnetic poles from Hawaiian and Canary Islands' lavas, which have a mean (40)Ar/(39)Ar age of 776 ± 2 ka. Thus, the polarity transition is unambiguously the MB boundary. A revised correlation of tuff layers in the Bapang Formation reveals that the hominid last occurrence and the tektite level in the Sangiran area are nearly coincident, just below the Upper Middle Tuff, which underlies the MB transition. The stratigraphic relationship of the tektite level to the MB transition in the Sangiran area is consistent with deep-sea core data that show that the meteorite impact preceded the MB reversal by about 12 ka. The MB boundary currently defines the uppermost horizon yielding Homo erectus fossils in the Sangiran area.

Deep SOMs for automated feature extraction and classification from big data streaming

NASA Astrophysics Data System (ADS)

Sakkari, Mohamed; Ejbali, Ridha; Zaied, Mourad

2017-03-01

In this paper, we proposed a deep self-organizing map model (Deep-SOMs) for automated features extracting and learning from big data streaming which we benefit from the framework Spark for real time streams and highly parallel data processing. The SOMs deep architecture is based on the notion of abstraction (patterns automatically extract from the raw data, from the less to more abstract). The proposed model consists of three hidden self-organizing layers, an input and an output layer. Each layer is made up of a multitude of SOMs, each map only focusing at local headmistress sub-region from the input image. Then, each layer trains the local information to generate more overall information in the higher layer. The proposed Deep-SOMs model is unique in terms of the layers architecture, the SOMs sampling method and learning. During the learning stage we use a set of unsupervised SOMs for feature extraction. We validate the effectiveness of our approach on large data sets such as Leukemia dataset and SRBCT. Results of comparison have shown that the Deep-SOMs model performs better than many existing algorithms for images classification.

Using regime analysis to identify the contribution of clouds to surface temperature errors in weather and climate models

DOE PAGES

Van Weverberg, Kwinten; Morcrette, Cyril J.; Ma, Hsi -Yen; ...

2015-06-17

Many global circulation models (GCMs) exhibit a persistent bias in the 2 m temperature over the midlatitude continents, present in short-range forecasts as well as long-term climate simulations. A number of hypotheses have been proposed, revolving around deficiencies in the soil–vegetation–atmosphere energy exchange, poorly resolved low-level boundary-layer clouds or misrepresentations of deep-convective storms. A common approach to evaluating model biases focuses on the model-mean state. However, this makes difficult an unambiguous interpretation of the origins of a bias, given that biases are the result of the superposition of impacts of clouds and land-surface deficiencies over multiple time steps. This articlemore » presents a new methodology to objectively detect the role of clouds in the creation of a surface warm bias. A unique feature of this study is its focus on temperature-error growth at the time-step level. It is shown that compositing the temperature-error growth by the coinciding bias in total downwelling radiation provides unambiguous evidence for the role that clouds play in the creation of the surface warm bias during certain portions of the day. Furthermore, the application of an objective cloud-regime classification allows for the detection of the specific cloud regimes that matter most for the creation of the bias. We applied this method to two state-of-the-art GCMs that exhibit a distinct warm bias over the Southern Great Plains of the USA. Our analysis highlights that, in one GCM, biases in deep-convective and low-level clouds contribute most to the temperature-error growth in the afternoon and evening respectively. In the second GCM, deep clouds persist too long in the evening, leading to a growth of the temperature bias. In conclusion, the reduction of the temperature bias in both models in the morning and the growth of the bias in the second GCM in the afternoon could not be assigned to a cloud issue, but are more likely caused by a land-surface deficiency.« less

Deep centers in AlGaN-based light emitting diode structures

NASA Astrophysics Data System (ADS)

Polyakov, A. Y.; Smirnov, N. B.; Govorkov, A. V.; Mil'vidskii, M. G.; Usikov, A. S.; Pushnyi, B. V.; Lundin, W. V.

1999-10-01

Deep traps were studied in GaN homojunction and AlGaN/GaN heterojunction light emitting diode (LED) p-i-n structures by means of deep levels transient spectroscopy (DLTS), admittance and electroluminescence (EL) spectra measurements. It is shown that, in homojunction LED structures, the EL spectra comes from recombination involving Mg acceptors in-diffusing into the active i-layer. This Mg in-diffusion is strongly suppressed in heterostructures with the upper p-type layer containing about 5% of Al. As a result the main peak in the EL spectra of heterostructures is shifted toward higher energy compared to homojunctions. Joint doping of the i-layer with Zn and Si allows to shift the main EL peak to longer wavelength. The dominant electron traps observed in the studied LED structures had ionization energies of 0.55 and 0.85 eV. The dominant hole traps had apparent ionization energies of 0.85 and 0.4 eV. The latter traps were shown to be metastable and it is argued that they could be at least in part responsible for the persistent photoconductivity observed in p-GaN.

Visual Saliency Detection Based on Multiscale Deep CNN Features.

PubMed

Guanbin Li; Yizhou Yu

2016-11-01

Visual saliency is a fundamental problem in both cognitive and computational sciences, including computer vision. In this paper, we discover that a high-quality visual saliency model can be learned from multiscale features extracted using deep convolutional neural networks (CNNs), which have had many successes in visual recognition tasks. For learning such saliency models, we introduce a neural network architecture, which has fully connected layers on top of CNNs responsible for feature extraction at three different scales. The penultimate layer of our neural network has been confirmed to be a discriminative high-level feature vector for saliency detection, which we call deep contrast feature. To generate a more robust feature, we integrate handcrafted low-level features with our deep contrast feature. To promote further research and evaluation of visual saliency models, we also construct a new large database of 4447 challenging images and their pixelwise saliency annotations. Experimental results demonstrate that our proposed method is capable of achieving the state-of-the-art performance on all public benchmarks, improving the F-measure by 6.12% and 10%, respectively, on the DUT-OMRON data set and our new data set (HKU-IS), and lowering the mean absolute error by 9% and 35.3%, respectively, on these two data sets.

The permafrost carbon inventory on the Tibetan Plateau: a new evaluation using deep sediment cores

NASA Astrophysics Data System (ADS)

Yang, Y.; Ding, J.; Li, F.; Yang, G.; Chen, L.

2016-12-01

The permafrost organic carbon (OC) stock is of global significance because of its large pool size and potential positive feedback to climate warming. However, due to the lack of systematic field observations and appropriate upscaling methodologies, substantial uncertainties exist in the permafrost OC budget, which limits our understanding on the fate of frozen carbon in a warming world. In particular, the lack of comprehensive estimation of OC stock across alpine permafrost means that the current knowledge on this issue remains incomplete. Here we evaluated the pool size and spatial variations of permafrost OC stock to 3 meters depth on the Tibetan Plateau by combining systematic measurements from a substantial number of pedons (i.e., 342 three-meter-deep cores and 177 50-cm-deep pits) with a machine learning technique (i.e., support vector machine, SVM). We also quantified uncertainties in permafrost carbon budget by conducting Monte Carlo simulation. Our results revealed that the combination of systematic measurements with the SVM model allowed spatially explicit estimates. The OC density (OC amount per unit area, OCD) exhibited a decreasing trend from the southeastern to the northwestern plateau, with the exception that OCD in the swamp meadow was substantially higher than that in surrounding regions. Our results also demonstrated that Tibetan permafrost stored a large amount of OC in the top 3 meters, with the median OC pool size being 15.31 Pg C (interquartile range: 13.03-17.77 Pg C). Of them, 44% occurred in deep layers (i.e., 100-300 cm), close to the proportion observed across the northern circumpolar permafrost region. The large carbon pool size, together with significant permafrost thawing implies a risk of carbon emissions and positive climate feedback across the Tibetan alpine permafrost region.

The influence of the depth of k-core layers on the robustness of interdependent networks against cascading failures

NASA Astrophysics Data System (ADS)

Dong, Zhengcheng; Fang, Yanjun; Tian, Meng; Kong, Zhengmin

The hierarchical structure, k-core, is common in various complex networks, and the actual network always has successive layers from 1-core layer (the peripheral layer) to km-core layer (the core layer). The nodes within the core layer have been proved to be the most influential spreaders, but there is few work about how the depth of k-core layers (the value of km) can affect the robustness against cascading failures, rather than the interdependent networks. First, following the preferential attachment, a novel method is proposed to generate the scale-free network with successive k-core layers (KCBA network), and the KCBA network is validated more realistic than the traditional BA network. Then, with KCBA interdependent networks, the effect of the depth of k-core layers is investigated. Considering the load-based model, the loss of capacity on nodes is adopted to quantify the robustness instead of the number of functional nodes in the end. We conduct two attacking strategies, i.e. the RO-attack (Randomly remove only one node) and the RF-attack (Randomly remove a fraction of nodes). Results show that the robustness of KCBA networks not only depends on the depth of k-core layers, but also is slightly influenced by the initial load. With RO-attack, the networks with less k-core layers are more robust when the initial load is small. With RF-attack, the robustness improves with small km, but the improvement is getting weaker with the increment of the initial load. In a word, the lower the depth is, the more robust the networks will be.

Deep Networks Can Resemble Human Feed-forward Vision in Invariant Object Recognition

PubMed Central

Kheradpisheh, Saeed Reza; Ghodrati, Masoud; Ganjtabesh, Mohammad; Masquelier, Timothée

2016-01-01

Deep convolutional neural networks (DCNNs) have attracted much attention recently, and have shown to be able to recognize thousands of object categories in natural image databases. Their architecture is somewhat similar to that of the human visual system: both use restricted receptive fields, and a hierarchy of layers which progressively extract more and more abstracted features. Yet it is unknown whether DCNNs match human performance at the task of view-invariant object recognition, whether they make similar errors and use similar representations for this task, and whether the answers depend on the magnitude of the viewpoint variations. To investigate these issues, we benchmarked eight state-of-the-art DCNNs, the HMAX model, and a baseline shallow model and compared their results to those of humans with backward masking. Unlike in all previous DCNN studies, we carefully controlled the magnitude of the viewpoint variations to demonstrate that shallow nets can outperform deep nets and humans when variations are weak. When facing larger variations, however, more layers were needed to match human performance and error distributions, and to have representations that are consistent with human behavior. A very deep net with 18 layers even outperformed humans at the highest variation level, using the most human-like representations. PMID:27601096

SystemC modelling of wireless communication channel

NASA Astrophysics Data System (ADS)

Conti, Massimo; Orcioni, Simone

2011-05-01

This paper presents the definition in SystemC of wireless channels at different levels of abstraction. The different levels of description of the wireless channel can be easily interchanged allowing the reuse of the application and baseband layers in a high level analysis of the network or in a deep analysis of the communication between the wireless devices.

Transmission electron microscopy and ab initio calculations to relate interfacial intermixing and the magnetism of core/shell nanoparticles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chi, C.-C.; Hsiao, C.-H.; Ouyang, Chuenhou, E-mail: houyang@mx.nthu.edu.tw

2015-05-07

Significant efforts towards understanding bi-magnetic core-shell nanoparticles are underway currently as they provide a pathway towards properties unavailable with single-phased systems. Recently, we have demonstrated that the magnetism of γ-Fe2O3/CoO core-shell nanoparticles, in particular, at high temperatures, originates essentially from an interfacial doped iron-oxide layer that is formed by the migration of Co{sup 2+} from the CoO shell into the surface layers of the γ-Fe2O3 core [Skoropata et al., Phys. Rev. B 89, 024410 (2014)]. To examine directly the nature of the intermixed layer, we have used high-resolution transmission electron microscopy (HRTEM) and first-principles calculations to examine the impact ofmore » the core-shell intermixing at the atomic level. By analyzing the HRTEM images and energy dispersive spectra, the level and nature of intermixing was confirmed, mainly as doping of Co into the octahedral site vacancies of γ-Fe2O3. The average Co doping depths for different processing temperatures (150 °C and 235 °C) were 0.56 nm and 0.78 nm (determined to within 5% through simulation), respectively, establishing that the amount of core-shell intermixing can be altered purposefully with an appropriate change in synthesis conditions. Through first-principles calculations, we find that the intermixing phase of γ-Fe2O3 with Co doping is ferromagnetic, with even higher magnetization as compared to that of pure γ-Fe2O3. In addition, we show that Co doping into different octahedral sites can cause different magnetizations. This was reflected in a change in overall nanoparticle magnetization, where we observed a 25% reduction in magnetization for the 235 °C versus the 150 °C sample, despite a thicker intermixed layer.« less

Characterising Atlantic deep waters during the extreme warmth of the early Eocene 'greenhouse'.

NASA Astrophysics Data System (ADS)

Cameron, A.; Sexton, P. F.; Anand, P.; Huck, C. E.; Fehr, M.; Dickson, A.; Scher, H. D.; van de Flierdt, T.; Westerhold, T.; Roehl, U.

2014-12-01

The meridional overturning circulation (MOC) is a planetary-scale oceanic flow that is of direct importance to the climate system because it transports heat, salt and nutrients to high latitudes and regulates the exchange of CO2 with the atmosphere. The Atlantic Ocean plays a strong role in the modern day MOC however, it is unclear what role it may have played during extreme climate conditions such as those found in the early Eocene 'greenhouse'. In order to resolve the Atlantic's role in the MOC during the early/middle Eocene, we present a multi-proxy approach to investigate changes in ocean circulation, water mass geometry, sediment supply to the deep oceans and the physical strength of deep waters from four different IODP drill sites. Neodymium isotopes (ɛNd), REE profiles and cerium anomalies measured in fossilised fish teeth help to characterise geochemical changes to water masses throughout the Atlantic whilst bulk sediment ɛNd and XRF-core scan data documents changes in sediment supply to the region. Sortable silt data provides a physical constraint on the strength of deep-water movements during the extreme climatic conditions of the early Eocene. We utilise expanded and continuous sequences from two sites in the North west Atlantic spanning the early to middle Eocene recently recovered on IODP Exp. 342 (1403, 1409) that are located on the Newfoundland Ridge, directly in the flow path of today's Deep Western Boundary Current. We also present data from equatorial Demerara Rise (IODP site 1258) and from further north at the mouth of the Labrador Sea (ODP Site 647).

Origin of interfacial perpendicular magnetic anisotropy in MgO/CoFe/metallic capping layer structures

NASA Astrophysics Data System (ADS)

Peng, Shouzhong; Wang, Mengxing; Yang, Hongxin; Zeng, Lang; Nan, Jiang; Zhou, Jiaqi; Zhang, Youguang; Hallal, Ali; Chshiev, Mairbek; Wang, Kang L.; Zhang, Qianfan; Zhao, Weisheng

2015-12-01

Spin-transfer-torque magnetic random access memory (STT-MRAM) attracts extensive attentions due to its non-volatility, high density and low power consumption. The core device in STT-MRAM is CoFeB/MgO-based magnetic tunnel junction (MTJ), which possesses a high tunnel magnetoresistance ratio as well as a large value of perpendicular magnetic anisotropy (PMA). It has been experimentally proven that a capping layer coating on CoFeB layer is essential to obtain a strong PMA. However, the physical mechanism of such effect remains unclear. In this paper, we investigate the origin of the PMA in MgO/CoFe/metallic capping layer structures by using a first-principles computation scheme. The trend of PMA variation with different capping materials agrees well with experimental results. We find that interfacial PMA in the three-layer structures comes from both the MgO/CoFe and CoFe/capping layer interfaces, which can be analyzed separately. Furthermore, the PMAs in the CoFe/capping layer interfaces are analyzed through resolving the magnetic anisotropy energy by layer and orbital. The variation of PMA with different capping materials is attributed to the different hybridizations of both d and p orbitals via spin-orbit coupling. This work can significantly benefit the research and development of nanoscale STT-MRAM.

Origin of interfacial perpendicular magnetic anisotropy in MgO/CoFe/metallic capping layer structures.

PubMed

Peng, Shouzhong; Wang, Mengxing; Yang, Hongxin; Zeng, Lang; Nan, Jiang; Zhou, Jiaqi; Zhang, Youguang; Hallal, Ali; Chshiev, Mairbek; Wang, Kang L; Zhang, Qianfan; Zhao, Weisheng

2015-12-11

Spin-transfer-torque magnetic random access memory (STT-MRAM) attracts extensive attentions due to its non-volatility, high density and low power consumption. The core device in STT-MRAM is CoFeB/MgO-based magnetic tunnel junction (MTJ), which possesses a high tunnel magnetoresistance ratio as well as a large value of perpendicular magnetic anisotropy (PMA). It has been experimentally proven that a capping layer coating on CoFeB layer is essential to obtain a strong PMA. However, the physical mechanism of such effect remains unclear. In this paper, we investigate the origin of the PMA in MgO/CoFe/metallic capping layer structures by using a first-principles computation scheme. The trend of PMA variation with different capping materials agrees well with experimental results. We find that interfacial PMA in the three-layer structures comes from both the MgO/CoFe and CoFe/capping layer interfaces, which can be analyzed separately. Furthermore, the PMAs in the CoFe/capping layer interfaces are analyzed through resolving the magnetic anisotropy energy by layer and orbital. The variation of PMA with different capping materials is attributed to the different hybridizations of both d and p orbitals via spin-orbit coupling. This work can significantly benefit the research and development of nanoscale STT-MRAM.

Flexural wave attenuation in a sandwich beam with viscoelastic periodic cores

NASA Astrophysics Data System (ADS)

Guo, Zhiwei; Sheng, Meiping; Pan, Jie

2017-07-01

The flexural-wave attenuation performance of traditional constraint-layer damping in a sandwich beam is improved by using periodic constrained-layer damping (PCLD), where the monolithic viscoelastic core is replaced with two periodically alternating viscoelastic cores. Closed-form solutions of the wave propagation constants of the infinite periodic sandwich beam and the forced response of the corresponding finite sandwich structure are theoretically derived, providing computational support on the analysis of attenuation characteristics. In a sandwich beam with PCLD, the flexural waves can be attenuated by both Bragg scattering effect and damping effect, where the attenuation level is mainly dominated by Bragg scattering in the band-gaps and by damping in the pass-bands. Affected by these two effects, when the parameters of periodic cores are properly selected, a sandwich beam with PCLD can effectively reduce vibrations of much lower frequencies than that with traditional constrained-layer damping. The effects of the parameters of viscoelastic periodic cores on band-gap properties are also discussed, showing that the average attenuation in the desired frequency band can be maximized by tuning the length ratio and core thickness to proper values. The research in this paper could possibly provide useful information for the researches and engineers to design damping structures.

Paleoenvironmental events during the last 13,000 years in the central Red Sea as recorded by pteropoda

NASA Astrophysics Data System (ADS)

Almogi-Labin, Ahuva; Hemleben, Christoph; Meischner, Dieter; Erlenkeuser, Helmut

1991-02-01

A high-resolution record was obtained by investigating a sedimentary sequence from two cores taken in the central Red Sea (R/V Meteor cruise 5, leg 2). The numerical variations between nonmigratory and migratory pteropods and their stable isotopic record were studied together with variations in the carbonate and total organic carbon content in order to estimate changes in the structure of the water column during the last 13 kyr. The results indicate the existence of a highly stratified water column during deglaciation and early Holocene (13-8.5 ka). During this period the depth of the mixed layer varied between less than 50-100 m at most, and productivity was markedly reduced in comparison to the recent situation. The intermediate and deep water were constantly highly depleted in oxygen. A pronounced Younger Dryas event was recognized at 10.4 ka which coincides with an arid phase on the border land. The oxygenation of the intermediate water improved remarkably after 7.5 ka and peaked during the period between 4.6 and 2.0 ka. During this period the mixed layer reached its present depth and the productivity which was maximal during middle Holocene attained present level during the last 4.6 kyr.

Detection and modeling of leakage current in AlGaN-based deep ultraviolet light-emitting diodes

DOE PAGES

Moseley, Michael William; Allerman, Andrew A.; Crawford, Mary H.; ...

2015-03-01

Current-voltage (IV) characteristics of two AlGaN-based deep ultraviolet (DUV) light-emitting diodes (LEDs) with differing densities of open-core threading dislocations (nanopipes) are analyzed. A three-diode circuit is simulated to emulate the IV characteristics of the DUV-LEDs, but is only able to accurately model the lower leakage current, lower nanopipe density DUV-LED. It was found that current leakage through the nanopipes in these structures is rectifying, despite nanopipes being previously established as inherently n-type. Using defect-sensitive etching, the nanopipes are revealed to terminate within the p-type GaN capping layer of the DUV-LEDs. The circuit model is modified to account for another p-nmore » junction between the n-type nanopipes and the p-type GaN, and an excellent fit to the IV characteristics of the leaky DUV-LED is achieved.« less

Last 900 ka river longprofile changes controlled by Yoro fault activity and glacial sea-level changes, Nobi plain, central Japan

NASA Astrophysics Data System (ADS)

Sugai, T.; Sato, T.

2015-12-01

This paper compared grain size, thickness, and lithological character of ten fluvial gravel layers formed during the glacial sea-level lowstands intervening inner bay mud layers deposited during the interglacial marine transgressional periods since the last 900 ka by integrated analyses of sediment cores including 600 m deep onein the Nobi plain, central Japan. Linkages between river long profile changes and sea-level and climate changes will be discussed. The Nobi basin is one of the representative delta type alluvial lowlands in Japan dominated by longitudinal drainage system named Kiso river system flowing southward from central Japan Alps with abundant water and sediment discharges. The basin bounded by the Yoro fault on the west has been tilted westward by the repetitive faulting activity. The basin stratigraphy and its stacking patterns suggest uniform and rapid subsidence and tilting rates of the basin with the maximum value of 1 mm yr-1 and 10-4 kyr-1 respectively produced by the Yoro fault activity under the W-E compressional regional stress field during the middle and late Quaternary periods. Tephrochronological, paleomagnetic, geochemical, and diatom analyses enabled to identify ten times repeated marine transgression-regression sequences correlated with full glacial-interglacial sea-level changes during the last 900 ka. All of the ten sequence boundaries were characterized by fluvial gravel layers were formed by the Kiso river system. The mean maximum gravel size is proportional to the magnitude of sea level lowering inferred from MIS curve, i.e. gravels deposited in MIS 12 and 16 are the largest, and those in MIS 14 and 8 are the smallest since MIS 16. This suggests that the longitudinal profile of the Kiso river system has been adjusting to the sea level changes and that the steeper longitudinal profile formed in the lower sea level periods can transport larger gravels to the drilling sites. In fact the present river bed gravel size is in proportion with the tractive force and mainly controlled by slope of the rive long-profile.

A Conceptual Model for Tropical Cyclone Formation

NASA Astrophysics Data System (ADS)

Wang, Z.

2014-12-01

The role of cumulus congestus (shallow and congestus convection) in tropical cyclone (TC) formation is examined in a high-resolution simulation of Tropical Cyclone Fay (2008). It is found that cumulus congestus plays a dominant role in moistening the lower to middle troposphere and spinning up the near-surface circulation before genesis, while deep convection plays a key role in moistening the upper troposphere and intensifying the cyclonic circulation over a deep layer. The transition from the tropical wave stage to the TC stage is marked by a substantial increase in net condensation and potential vorticity generation by deep convection in the inner wave pouch region. This study suggests that TC formation can be regarded as a two-stage process. The first stage is a gradual process of moisture preconditioning and the low-level spinup, in which cumulus congestus plays a dominant role. The second stage commences with the rapid development of deep convection in the inner pouch region after the air column is moistened sufficiently, whereupon the concentrated convective heating near the pouch center strengthens the transverse circulation and leads to the amplification of the cyclonic circulation over a deep layer. The rapid development of deep convection can be explained by the power-law increase of precipitation rate with column water vapor (CWV) above a critical value. The high CWV near the pouch center thus plays an important role in convective organization. It is also shown that cumulus congestus can effectively drive the low-level convergence and provides a direct and simple pathway for the development of the TC proto-vortex near the surface.

Magnetic Hysteresis of Deep-Sea Sediments in Korea Deep Ocean Study(KODOS) Area, NE Pacific

NASA Astrophysics Data System (ADS)

Kim, K.; Park, C.; Yoo, C.

2001-12-01

The KODOS area within the Clarion-Clipperton fracture zone (C-C zone) is surrounded by the Hawaiian and Line Island Ridges to the west and the central American continent to the east. Topography of the seafloor consists of flat-topped abyssal hills and adjacent abyssal troughs, both of which run parallel in N-S direction. Sediments from the study area consist mainly of biogenic sediments. Latitudinal zonation of sedimentary facies was caused by the accumulation of biogenic materials associated with the equatorial current system and movement of the Pacific plate toward the north or northwest. The KODOS area belongs to the latitudinal transition zone having depositional characteristics between non-fossiliferous pelagic clay-dominated zone and calcareous sediment-dominated zone. The box core sediments of the KODOS area are analyzed in an attempt to obtain magnetic hysteresis information and to elucidate the relationship between hysteresis property and lithological facies. Variations in magnetic hysteresis parameters with unit layers reflect the magnetic grain-size and concentrations within the sediments. The ratios of remanant coercivity/coercive force (Hcr/Hc) and saturation remnance/saturation magnetization (Mrs/Ms) indicate that coarse magnetic grains are mainly distributed in dark brown sediments (lower part of the sediment core samples) reflecting high Hcr/Hc and low Mrs/Ms ratios. These results are mainly caused by dissolution differences with core depth. From the plotting of the ratios of hyteresis parameters, it is indicated that magnetic minerals in cubic samples are in pseudo-single domain (PSD) state.

Expanding anchored hybrid enrichment to resolve both deep and shallow relationships within the spider tree of life.

PubMed

Hamilton, Chris A; Lemmon, Alan R; Lemmon, Emily Moriarty; Bond, Jason E

2016-10-13

Despite considerable effort, progress in spider molecular systematics has lagged behind many other comparable arthropod groups, thereby hindering family-level resolution, classification, and testing of important macroevolutionary hypotheses. Recently, alternative targeted sequence capture techniques have provided molecular systematics a powerful tool for resolving relationships across the Tree of Life. One of these approaches, Anchored Hybrid Enrichment (AHE), is designed to recover hundreds of unique orthologous loci from across the genome, for resolving both shallow and deep-scale evolutionary relationships within non-model systems. Herein we present a modification of the AHE approach that expands its use for application in spiders, with a particular emphasis on the infraorder Mygalomorphae. Our aim was to design a set of probes that effectively capture loci informative at a diversity of phylogenetic timescales. Following identification of putative arthropod-wide loci, we utilized homologous transcriptome sequences from 17 species across all spiders to identify exon boundaries. Conserved regions with variable flanking regions were then sought across the tick genome, three published araneomorph spider genomes, and raw genomic reads of two mygalomorph taxa. Following development of the 585 target loci in the Spider Probe Kit, we applied AHE across three taxonomic depths to evaluate performance: deep-level spider family relationships (33 taxa, 327 loci); family and generic relationships within the mygalomorph family Euctenizidae (25 taxa, 403 loci); and species relationships in the North American tarantula genus Aphonopelma (83 taxa, 581 loci). At the deepest level, all three major spider lineages (the Mesothelae, Mygalomorphae, and Araneomorphae) were supported with high bootstrap support. Strong support was also found throughout the Euctenizidae, including generic relationships within the family and species relationships within the genus Aptostichus. As in the Euctenizidae, virtually identical topologies were inferred with high support throughout Aphonopelma. The Spider Probe Kit, the first implementation of AHE methodology in Class Arachnida, holds great promise for gathering the types and quantities of molecular data needed to accelerate an understanding of the spider Tree of Life by providing a mechanism whereby different researchers can confidently and effectively use the same loci for independent projects, yet allowing synthesis of data across independent research groups.

Design and analysis of three-layer-core optical fiber

NASA Astrophysics Data System (ADS)

Zheng, Siwen; Liu, Yazhuo; Chang, Guangjian

2018-03-01

A three-layer-core single-mode large-mode-area fiber is investigated. The three-layer structure in the core, which is composed of a core-index layer, a cladding-index layer, and a depression-index layer, could achieve a large effective area Aeff while maintaining an ultralow bending loss without deteriorating cutoff behaviors. The single-mode large mode area of 100 to 330 μm2 could be achieved in the fiber. The effective area Aeff can be further enlarged by adjusting the layer parameters. Furthermore, the bending property could be improved in this three-layer-core structure. The bending loss could decrease by 2 to 4 orders of magnitude compared with the conventional step-index fiber with the same Aeff. These characteristics of three-layer-core fiber suggest that it can be used in large-mode-area wide-bandwidth high-capacity transmission or high-power optical fiber laser and amplifier in optical communications, which could be used for the basic physical layer structure of big data storage, reading, calculation, and transmission applications.

Vertical distribution and diel migration of macrozooplankton in the St. Lawrence marine system (Canada) in relation with the cold intermediate layer thermal properties

NASA Astrophysics Data System (ADS)

Harvey, Michel; Galbraith, Peter S.; Descroix, Aurélie

2009-01-01

Vertical distribution of various species and stages of macrozooplankton (euphausiacea, chaetognatha, cnidaria, mysidacea, amphipoda) were determined for different times of the day and related to the physical environment. Stratified sampling with the BIONESS was carried out during seven cruises in spring and fall 1998, 2000, and 2001, and fall 1999, in two different habitats in the St. Lawrence marine system: the lower St. Lawrence Estuary and the NW Gulf of St. Lawrence. Our results indicate that the various macrozooplankton species were distributed throughout the whole water column including the surface layer, the cold intermediate layer (CIL), and the deep layer at different times of day and night in both areas during all periods. Moreover, three types of migrational patterns were observed within this zooplanktonic community: (1) nocturnal ascent by the whole population, (2) segregation into two groups; one which performed nocturnal accent and another which remained in the deep, and (3) no detectable migration. We also observed that the diel vertical migration (DVM) amplitude in most of the macrozooplankton species varied as a function of physical factors, in particular the spatio-temporal variations of the CIL thermal properties, including the upper and the lower limits of the CIL and the depth of the CIL core temperature. Finally, the different DVM patterns coupled with estuarine circulation patterns and bottom topography could place animals in different flow regimes by night and by day and contribute to their retention (aggregation) and/or dispersion in different areas, time of the day, and seasons.

Development of a single-shot CCD-based data acquisition system for time-resolved X-ray photoelectron spectroscopy at an X-ray free-electron laser facility

PubMed Central

Oura, Masaki; Wagai, Tatsuya; Chainani, Ashish; Miyawaki, Jun; Sato, Hiromi; Matsunami, Masaharu; Eguchi, Ritsuko; Kiss, Takayuki; Yamaguchi, Takashi; Nakatani, Yasuhiro; Togashi, Tadashi; Katayama, Tetsuo; Ogawa, Kanade; Yabashi, Makina; Tanaka, Yoshihito; Kohmura, Yoshiki; Tamasaku, Kenji; Shin, Shik; Ishikawa, Tetsuya

2014-01-01

In order to utilize high-brilliance photon sources, such as X-ray free-electron lasers (XFELs), for advanced time-resolved photoelectron spectroscopy (TR-PES), a single-shot CCD-based data acquisition system combined with a high-resolution hemispherical electron energy analyzer has been developed. The system’s design enables it to be controlled by an external trigger signal for single-shot pump–probe-type TR-PES. The basic performance of the system is demonstrated with an offline test, followed by online core-level photoelectron and Auger electron spectroscopy in ‘single-shot image’, ‘shot-to-shot image (image-to-image storage or block storage)’ and ‘shot-to-shot sweep’ modes at soft X-ray undulator beamline BL17SU of SPring-8. In the offline test the typical repetition rate for image-to-image storage mode has been confirmed to be about 15 Hz using a conventional pulse-generator. The function for correcting the shot-to-shot intensity fluctuations of the exciting photon beam, an important requirement for the TR-PES experiments at FEL sources, has been successfully tested at BL17SU by measuring Au 4f photoelectrons with intentionally controlled photon flux. The system has also been applied to hard X-ray PES (HAXPES) in ‘ordinary sweep’ mode as well as shot-to-shot image mode at the 27 m-long undulator beamline BL19LXU of SPring-8 and also at the SACLA XFEL facility. The XFEL-induced Ti 1s core-level spectrum of La-doped SrTiO3 is reported as a function of incident power density. The Ti 1s core-level spectrum obtained at low power density is consistent with the spectrum obtained using the synchrotron source. At high power densities the Ti 1s core-level spectra show space-charge effects which are analysed using a known mean-field model for ultrafast electron packet propagation. The results successfully confirm the capability of the present data acquisition system for carrying out the core-level HAXPES studies of condensed matter induced by the XFEL. PMID:24365935

Architectural design of deep metallic sub-wavelength grating for practical holography display

NASA Astrophysics Data System (ADS)

Zhu, WenLiang; Shen, Chuan; Zhang, MingHua; Wei, Sui; Wang, XiangXiang; Wang, Ye

2017-10-01

Spatial light modulator (SLM) is the core device of holographic display, which requires a large space-bandwidth product (SBP), especially needing a wide viewing angle. According to the grating theory, the scale of the holographic display unit should be close to the wavelength of light. The transmission resonances of deep metallic sub-wavelength grating structure, which is produced by the surface plasmon and Fabry-Perot (FP) resonance based on metal grating phenomenon of Wood's anomaly, especially the metal-insulator-metal (MIM) structure provides a theoretical and effective technique for enhancing the reflection resonances and can be used for implementing the holographic display unit technology. In this paper, we replace the top electrode layer of the LCOS with a metallic deep sub-wavelength grating structure and change the grating period, slit width and spacer thickness. The simulation results by aid of CST software are given, which demonstrate that the improved device with dielectric medium parameter within liquid crystal refractive rate range (1.4 1.7) can reach 0 to 2π phase modulation in the visible wavelength range. Moreover, it also decrease the difficulty of device processing.

Core-level spectra and binding energies of transition metal nitrides by non-destructive x-ray photoelectron spectroscopy through capping layers

NASA Astrophysics Data System (ADS)

Greczynski, G.; Primetzhofer, D.; Lu, J.; Hultman, L.

2017-02-01

We present the first measurements of x-ray photoelectron spectroscopy (XPS) core level binding energies (BE:s) for the widely-applicable group IVb-VIb polycrystalline transition metal nitrides (TMN's) TiN, VN, CrN, ZrN, NbN, MoN, HfN, TaN, and WN as well as AlN and SiN, which are common components in the TMN-based alloy systems. Nitride thin film samples were grown at 400 °C by reactive dc magnetron sputtering from elemental targets in Ar/N2 atmosphere. For XPS measurements, layers are either (i) Ar+ ion-etched to remove surface oxides resulting from the air exposure during sample transfer from the growth chamber into the XPS system, or (ii) in situ capped with a few nm thick Cr or W overlayers in the deposition system prior to air-exposure and loading into the XPS instrument. Film elemental composition and phase content is thoroughly characterized with time-of-flight elastic recoil detection analysis (ToF-E ERDA), Rutherford backscattering spectrometry (RBS), and x-ray diffraction. High energy resolution core level XPS spectra acquired with monochromatic Al Kα radiation on the ISO-calibrated instrument reveal that even mild etching conditions result in the formation of a nitrogen-deficient surface layer that substantially affects the extracted binding energy values. These spectra-modifying effects of Ar+ ion bombardment increase with increasing the metal atom mass due to an increasing nitrogen-to-metal sputter yield ratio. The superior quality of the XPS spectra obtained in a non-destructive way from capped TMN films is evident from that numerous metal peaks, including Ti 2p, V 2p, Zr 3d, and Hf 4f, exhibit pronounced satellite features, in agreement with previously published spectra from layers grown and analyzed in situ. In addition, the N/metal concentration ratios are found to be 25-90% higher than those obtained from the corresponding ion-etched surfaces, and in most cases agree very well with the RBS and ToF-E ERDA values. The N 1 s BE:s extracted from capped TMN films, thus characteristic of a native surface, show a systematic trend, which contrasts with the large BE spread of literature "reference" values. Hence, non-destructive core level XPS employing capping layers provides an opportunity to obtain high-quality spectra, characteristic of virgin in situ grown and analyzed TMN films, although with larger versatility, and allows for extracting core level BE values that are more reliable than those obtained from sputter-cleaned N-deficient surfaces. Results presented here, recorded from a consistent set of binary TMN's grown under the same conditions and analyzed in the same instrument, provide a useful reference for future XPS studies of multinary materials systems allowing for true deconvolution of complex core level spectra.

Impact of strain on electronic defects in (Mg,Zn)O thin films

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmidt, Florian, E-mail: fschmidt@physik.uni-leipzig.de; Müller, Stefan; Wenckstern, Holger von

2014-09-14

We have investigated the impact of strain on the incorporation and the properties of extended and point defects in (Mg,Zn)O thin films by means of photoluminescence, X-ray diffraction, deep-level transient spectroscopy (DLTS), and deep-level optical spectroscopy. The recombination line Y₂, previously detected in ZnO thin films grown on an Al-doped ZnO buffer layer and attributed to tensile strain, was exclusively found in (Mg,Zn)O samples being under tensile strain and is absent in relaxed or compressively strained thin films. Furthermore a structural defect E3´ can be detected via DLTS measurements and is only incorporated in tensile strained samples. Finally it ismore » shown that the omnipresent deep-level E3 in ZnO can only be optically recharged in relaxed ZnO samples.« less

Deep level defects in Ge-doped (010) β-Ga2O3 layers grown by plasma-assisted molecular beam epitaxy

NASA Astrophysics Data System (ADS)

Farzana, Esmat; Ahmadi, Elaheh; Speck, James S.; Arehart, Aaron R.; Ringel, Steven A.

2018-04-01

Deep level defects were characterized in Ge-doped (010) β-Ga2O3 layers grown by plasma-assisted molecular beam epitaxy (PAMBE) using deep level optical spectroscopy (DLOS) and deep level transient (thermal) spectroscopy (DLTS) applied to Ni/β-Ga2O3:Ge (010) Schottky diodes that displayed Schottky barrier heights of 1.50 eV. DLOS revealed states at EC - 2.00 eV, EC - 3.25 eV, and EC - 4.37 eV with concentrations on the order of 1016 cm-3, and a lower concentration level at EC - 1.27 eV. In contrast to these states within the middle and lower parts of the bandgap probed by DLOS, DLTS measurements revealed much lower concentrations of states within the upper bandgap region at EC - 0.1 - 0.2 eV and EC - 0.98 eV. There was no evidence of the commonly observed trap state at ˜EC - 0.82 eV that has been reported to dominate the DLTS spectrum in substrate materials synthesized by melt-based growth methods such as edge defined film fed growth (EFG) and Czochralski methods [Zhang et al., Appl. Phys. Lett. 108, 052105 (2016) and Irmscher et al., J. Appl. Phys. 110, 063720 (2011)]. This strong sensitivity of defect incorporation on crystal growth method and conditions is unsurprising, which for PAMBE-grown β-Ga2O3:Ge manifests as a relatively "clean" upper part of the bandgap. However, the states at ˜EC - 0.98 eV, EC - 2.00 eV, and EC - 4.37 eV are reminiscent of similar findings from these earlier results on EFG-grown materials, suggesting that possible common sources might also be present irrespective of growth method.

Vorticity and Vertical Motions Diagnosed from Satellite Deep-Layer Temperatures. Revised

NASA Technical Reports Server (NTRS)

Spencer, Roy W.; Lapenta, William M.; Robertson, Franklin R.

1994-01-01

Spatial fields of satellite-measured deep-layer temperatures are examined in the context of quasigeostrophic theory. It is found that midtropospheric geostrophic vorticity and quasigeostrophic vertical motions can be diagnosed from microwave temperature measurements of only two deep layers. The lower- ( 1000-400 hPa) and upper- (400-50 hPa) layer temperatures are estimated from limb-corrected TIROS-N Microwave Sounding Units (MSU) channel 2 and 3 data, spatial fields of which can be used to estimate the midtropospheric thermal wind and geostrophic vorticity fields. Together with Trenberth's simplification of the quasigeostrophic omega equation, these two quantities can be then used to estimate the geostrophic vorticity advection by the thermal wind, which is related to the quasigeostrophic vertical velocity in the midtroposphere. Critical to the technique is the observation that geostrophic vorticity fields calculated from the channel 3 temperature features are very similar to those calculated from traditional, 'bottom-up' integrated height fields from radiosonde data. This suggests a lack of cyclone-scale height features near the top of the channel 3 weighting function, making the channel 3 cyclone-scale 'thickness' features approximately the same as height features near the bottom of the weighting function. Thus, the MSU data provide observational validation of the LID (level of insignificant dynamics) assumption of Hirshberg and Fritsch.

Detection prospects for GeV neutrinos from collisionally heated gamma-ray bursts with IceCube/DeepCore.

PubMed

Bartos, I; Beloborodov, A M; Hurley, K; Márka, S

2013-06-14

Jet reheating via nuclear collisions has recently been proposed as the main mechanism for gamma-ray burst (GRB) emission. In addition to producing the observed gamma rays, collisional heating must generate 10-100 GeV neutrinos, implying a close relation between the neutrino and gamma-ray luminosities. We exploit this theoretical relation to make predictions for possible GRB detections by IceCube + DeepCore. To estimate the expected neutrino signal, we use the largest sample of bursts observed by the Burst and Transient Source Experiment in 1991-2000. GRB neutrinos could have been detected if IceCube + DeepCore operated at that time. Detection of 10-100 GeV neutrinos would have significant implications, shedding light on the composition of GRB jets and their Lorentz factors. This could be an important target in designing future upgrades of the IceCube + DeepCore observatory.

Multi-level deep supervised networks for retinal vessel segmentation.

PubMed

Mo, Juan; Zhang, Lei

2017-12-01

Changes in the appearance of retinal blood vessels are an important indicator for various ophthalmologic and cardiovascular diseases, including diabetes, hypertension, arteriosclerosis, and choroidal neovascularization. Vessel segmentation from retinal images is very challenging because of low blood vessel contrast, intricate vessel topology, and the presence of pathologies such as microaneurysms and hemorrhages. To overcome these challenges, we propose a neural network-based method for vessel segmentation. A deep supervised fully convolutional network is developed by leveraging multi-level hierarchical features of the deep networks. To improve the discriminative capability of features in lower layers of the deep network and guide the gradient back propagation to overcome gradient vanishing, deep supervision with auxiliary classifiers is incorporated in some intermediate layers of the network. Moreover, the transferred knowledge learned from other domains is used to alleviate the issue of insufficient medical training data. The proposed approach does not rely on hand-crafted features and needs no problem-specific preprocessing or postprocessing, which reduces the impact of subjective factors. We evaluate the proposed method on three publicly available databases, the DRIVE, STARE, and CHASE_DB1 databases. Extensive experiments demonstrate that our approach achieves better or comparable performance to state-of-the-art methods with a much faster processing speed, making it suitable for real-world clinical applications. The results of cross-training experiments demonstrate its robustness with respect to the training set. The proposed approach segments retinal vessels accurately with a much faster processing speed and can be easily applied to other biomedical segmentation tasks.

In situ experimentation at the water/sediment interface in the deep sea: 2. Biotransformation of dissolved organic substrates by microbial communities at 2000m depth in the Bay of Biscay

NASA Astrophysics Data System (ADS)

Cahet, Guy; Daumas, Raoul; Sibuet, Myriam

Few attempts have been made to quantify the utilization of organic matter by the bacteria of the superficial layers of deep sea sediment. During two BIOCYAN cruises (August 1986 and June 1987) we used the submersible Cyana, to incubate sediment samples in situ in a specially designed box core in presence of 14C-glutamic acid and 3H leucine. These experiments were conducted at 2000m depth in the Bay of Biscay. Bacterial activity was stopped by the injection of formaldehyde. Samples were retrieved with the research submersible Cyana and its accompanying free vehicle shuttle. Sediment organic matter was fractioned into four components: 1) 14CO 2; 2) nucleic components and polysacharids; 3) labile proteins; and 4) condensed hydrolysable polymers. To evaluate the barotolerance of deep-sea bacteria, undisturbed superficial layer samples were also incubated with the same labelled substrates at 4°C at the atmospheric pressure. In both cases, and except for glucose, our results show that distributions of radioactivity in the different components of the organic material were almost similar. However, the rate of incorporation was usually higher for in situ experiments than for decompressed samples. Bacterial utilization of both 14C glutamic acid and 14C glucose were higher in June than in August. Such differences may result from changes in the food supply arriving as sinking particles and deriving from the photosynthetically productive surface waters. Food input was probably more important in June than in August leading to corresponding increases in: 1) the abundance of derived bacteria, and 2) deep-sea bacterial activities.

Redundant function of DNA ligase 1 and 3 in alternative end-joining during immunoglobulin class switch recombination.

PubMed

Masani, Shahnaz; Han, Li; Meek, Katheryn; Yu, Kefei

2016-02-02

Nonhomologous end-joining (NHEJ) is the major DNA double-strand break (DSB) repair pathway in mammals and resolves the DSBs generated during both V(D)J recombination in developing lymphocytes and class switch recombination (CSR) in antigen-stimulated B cells. In contrast to the absolute requirement for NHEJ to resolve DSBs associated with V(D)J recombination, DSBs associated with CSR can be resolved in NHEJ-deficient cells (albeit at a reduced level) by a poorly defined alternative end-joining (A-EJ) pathway. Deletion of DNA ligase IV (Lig4), a core component of the NHEJ pathway, reduces CSR efficiency in a mouse B-cell line capable of robust cytokine-stimulated CSR in cell culture. Here, we report that CSR levels are not further reduced by deletion of either of the two remaining DNA ligases (Lig1 and nuclear Lig3) in Lig4(-/-) cells. We conclude that in the absence of Lig4, Lig1, and Lig3 function in a redundant manner in resolving switch region DSBs during CSR.

Head-on collision of the second mode internal solitary waves

NASA Astrophysics Data System (ADS)

Terletska, Kateryna; Maderich, Vladimir; Jung, Kyung Tae

2017-04-01

Second mode internal waves are widespread in offshore areas, and they frequently follow the first mode internal waves on the oceanic shelf. Large amplitude internal solitary waves (ISW) of second mode containing trapped cores associated with closed streamlines can also transport plankton and nutrients. An interaction of ISWs with trapped cores takes place in a specific manner. It motivated us to carry out a computational study of head-on collision of ISWs of second mode propagating in a laboratory-scale numerical tank using the nonhydrostatic 3D numerical model based on the Navier-Stokes equations for a continuously stratified fluid. Three main classes of ISW of second mode propagating in the pycnocline layer of thickness h between homogeneous deep layers can be identified: (i) the weakly nonlinear waves; (ii) the stable strongly nonlinear waves with trapped cores; and (iii) the shear unstable strongly nonlinear waves (Maderich et al., 2015). Four interaction regimes for symmetric collision were separated from simulation results using this classification: (A) an almost elastic interaction of the weakly nonlinear waves; (B) a non-elastic interaction of waves with trapped cores when ISW amplitudes were close to critical non-dimensional amplitude a/h; (C) an almost elastic interaction of stable strongly nonlinear waves with trapped cores; (D) non-elastic interaction of the unstable strongly nonlinear waves. The unexpected result of simulation was that relative loss of energy due to the collision was maximal for regime B. New regime appeared when ISW of different amplitudes belonged to class (ii) collide. In result of interaction the exchange of mass between ISW occurred: the trapped core of smaller wave was entrained by core of larger ISW without mixing forming a new ISW of larger amplitude whereas in smaller ISW core of smaller wave totally substituted by fluid from larger wave. Overall, the wave characteristics induced by head-on collision agree well with the results of several available laboratory experiments. References [1] V. Maderich, K. T. Jung, K. Terletska, I. Brovchenko, T. Talipova, "Incomplete similarity of internal solitary waves with trapped core," Fluid Dynamics Research 47, 035511 (2015).

Oxidation of InP nanowires: a first principles molecular dynamics study.

PubMed

Berwanger, Mailing; Schoenhalz, Aline L; Dos Santos, Cláudia L; Piquini, Paulo

2016-11-16

InP nanowires are candidates for optoelectronic applications, and as protective capping layers of III-V core-shell nanowires. Their surfaces are oxidized under ambient conditions which affects the nanowire physical properties. The majority of theoretical studies of InP nanowires, however, do not take into account the oxide layer at their surfaces. In this work we use first principles molecular dynamics electronic structure calculations to study the first steps in the oxidation process of a non-saturated InP nanowire surface as well as the properties of an already oxidized surface of an InP nanowire. Our calculations show that the O 2 molecules dissociate through several mechanisms, resulting in incorporation of O atoms into the surface layers. The results confirm the experimental observation that the oxidized layers become amorphous but the non-oxidized core layers remain crystalline. Oxygen related bonds at the oxidized layers introduce defective levels at the band gap region, with greater contributions from defects involving In-O and P-O bonds.

Holocene monsoon variability inferred from Targo Xian peat bog in the Tangra Yumco basin, central Tibetan Plateau

NASA Astrophysics Data System (ADS)

Henkel, Karoline; Haberzettl, Torsten; Miehe, Sabine; Frenzel, Peter; Daut, Gerhard; Dietze, Elisabeth; Kasper, Thomas; Ahlborn, Marieke; Mäusbacher, Roland

2013-04-01

The Tibetan Plateau is the greatest plateau on Earth with an average altitude of 4,500 m asl. Due to its high elevation, large area and significant role in the formation of the Asian Monsoon Systems (e.g., Indian Ocean and East-Asian Summer Monsoon) it is considered to react very sensitive to climate variations. The numerous lake systems on the Tibetan Plateau represent excellent archives reflecting variations in the strength of the monsoon system in terms of hydrological changes expressed in lake level fluctuations. For example, terraces and lacustrine deposits around the saline lake Tangra Yumco indicate lake level highstands up to ~215 m higher than the present lake level. To study Holocene lake level variations we investigated a 3.6 m long sediment core recovered from a peat bog (near the Targo Xian settlement, 30°46'N, 86°40'E) on a recessional lake level terrace ~150 m above the present shoreline of Tangra Yumco. In particular, our analyses of sedimentological (grain size), geochemical (CNS and ICP-OES) and mineralogical (XRD) data allow a detailed and high-resolution interpretation of the hydrological conditions during the Holocene. The existence of two carbonate layers in the Targo Xian record, separated by a sand layer and intercalated in peat sequences at the bottom and top of the core, provide evidence for two stable lake stages at the coring position. Peat at the bottom of the core, which is radiocarbon-dated to 11,130 +130/-345 cal BP, indicates wetland conditions similar to the Recent situation (Miehe et al., submitted). After a transition zone, a layer of pure aragonitic lake marl gives evidence for a lake stage. During this stage, high values of the total inorganic carbon (TIC) and Ca/Ti ratios as well as low C/N ratios point to a stable lake due to wet climatic conditions. This carbonate layer can be correlated with a 2-3 m thick carbonate layer found in outcrops around the present lake Tangra Yumco presenting a high lake level until approx. 2.3 (+/-0.2) ka BP (OSL age, Long et al. 2012). Results of former investigations of other lakes on the Tibetan Plateau (e.g., lake Nam Co (Kasper et al., 2012)) point to a strong Indian Ocean Summer Monsoon during the Early to Mid Holocene. In the presented record, a falling lake level and a possible desiccation of the coring location is shown by a coarse sand layer including gravel. Another lake marl section above is well delimited from the other sections in its mineralogical composition as it is composed by calcite reflecting an additional lake stage at the coring site. This led to the assumption, that this second lake stage was characterized by a smaller lake with a higher detrital input which existed until approx. 930 +45/-135 cal BP. After an oscillation of dry and wet (peat production) phases a constant peat bog developed and is still present. References: Kasper, T. et al. (2012): doi: 10.1016/j.quascirev.2012.02.011 Long, H. et al. (2012): doi: 10.1016/j.quageo.2011.11.005 Miehe et al. (submitted): JOPL

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. Here, we propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method usesmore » a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT "clean" and DT "mix" gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. Furthermore, we observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λ ii~T 2/Z 2ρ at the gas/shell interface. Finally, since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.« less

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

DOE PAGES

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.; ...

2016-05-26

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. Here, we propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method usesmore » a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT "clean" and DT "mix" gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. Furthermore, we observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λ ii~T 2/Z 2ρ at the gas/shell interface. Finally, since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.« less

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

NASA Astrophysics Data System (ADS)

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.; McEvoy, A. M.; Zylstra, A.; Hammel, B. A.; Sepke, S. M.; Leatherland, A.; Gales, S.

2016-05-01

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. We propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method uses a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT “clean” and DT “mix” gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. An experiment to observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λii∼T2/Z2ρ at the gas/shell interface. Since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.

Laminar Neural Field Model of Laterally Propagating Waves of Orientation Selectivity

PubMed Central

2015-01-01

We construct a laminar neural-field model of primary visual cortex (V1) consisting of a superficial layer of neurons that encode the spatial location and orientation of a local visual stimulus coupled to a deep layer of neurons that only encode spatial location. The spatially-structured connections in the deep layer support the propagation of a traveling front, which then drives propagating orientation-dependent activity in the superficial layer. Using a combination of mathematical analysis and numerical simulations, we establish that the existence of a coherent orientation-selective wave relies on the presence of weak, long-range connections in the superficial layer that couple cells of similar orientation preference. Moreover, the wave persists in the presence of feedback from the superficial layer to the deep layer. Our results are consistent with recent experimental studies that indicate that deep and superficial layers work in tandem to determine the patterns of cortical activity observed in vivo. PMID:26491877

The deep layer of the tractus iliotibialis and its relevance when using the direct anterior approach in total hip arthroplasty: a cadaver study.

PubMed

Putzer, David; Haselbacher, Matthias; Hörmann, Romed; Klima, Günter; Nogler, Michael

2017-12-01

Surgical approaches through smaller incisions reveal less of the underlying anatomy, and therefore, detailed knowledge of the local anatomy and its variations is important in minimally invasive surgery. The aim of this study was to determine the location, extension, and histomorphology of the deep layer of the iliotibial band during minimally invasive hip surgery using the direct anterior approach (DAA). The morphology of the iliotibial tract was determined in this cadaver study on 40 hips with reference to the anterior superior iliac spine and the tibia. The deep layer of the tractus iliotibialis was exposed up to the hip-joint capsule and length and width measurements taken. Sections of the profound iliotibial tract were removed from the hips and the thickness of the sections was determined microscopically after staining. The superficial tractus iliotibialis had a length of 50.1 (SD 3.8) cm, while tensor fasciae latae total length was 18 (SD 2) cm [unattached 15 (SD 2.5) cm]. Length and width of the deep layer of the tractus iliotibialis were 10.4 (SD 1.3) × 3.3 (SD 0.6) cm. The deep iliotibial band always extended from the distal part of the tensor fascia latae (TFL) muscle to the lateral part of the hip capsule (mean maximum thickness 584 μm). Tractus iliotibialis deep layer morphology did not correlate to other measurements taken (body length, thigh length, and TFL length). The length of the deep layer is dependent on the TFL, since the profound part of the iliotibial band reaches from the TFL to the hip-joint capsule. The deep layer covers the hip-joint capsule, rectus, and lateral vastus muscles in the DAA interval. To access the precapsular fat pad and the hip-joint capsule, the deep layer has to be split in all approaches that use the direct anterior interval.

Deep Learning of Atomically Resolved Scanning Transmission Electron Microscopy Images: Chemical Identification and Tracking Local Transformations

DOE PAGES

Ziatdinov, Maxim; Dyck, Ondrej; Maksov, Artem; ...

2017-12-07

Recent advances in scanning transmission electron and scanning probe microscopies have opened unprecedented opportunities in probing the materials structural parameters and various functional properties in real space with an angstrom-level precision. This progress has been accompanied by exponential increase in the size and quality of datasets produced by microscopic and spectroscopic experimental techniques. These developments necessitate adequate methods for extracting relevant physical and chemical information from the large datasets, for which a priori information on the structures of various atomic configurations and lattice defects is limited or absent. Here we demonstrate an application of deep neural networks to extracting informationmore » from atomically resolved images including location of the atomic species and type of defects. We develop a “weakly-supervised” approach that uses information on the coordinates of all atomic species in the image, extracted via a deep neural network, to identify a rich variety of defects that are not part of an initial training set. We further apply our approach to interpret complex atomic and defect transformation, including switching between different coordination of silicon dopants in graphene as a function of time, formation of peculiar silicon dimer with mixed 3-fold and 4-fold coordination, and the motion of molecular “rotor”. In conclusion, this deep learning based approach resembles logic of a human operator, but can be scaled leading to significant shift in the way of extracting and analyzing information from raw experimental data.« less

Deep Learning of Atomically Resolved Scanning Transmission Electron Microscopy Images: Chemical Identification and Tracking Local Transformations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ziatdinov, Maxim; Dyck, Ondrej; Maksov, Artem

Recent advances in scanning transmission electron and scanning probe microscopies have opened unprecedented opportunities in probing the materials structural parameters and various functional properties in real space with an angstrom-level precision. This progress has been accompanied by exponential increase in the size and quality of datasets produced by microscopic and spectroscopic experimental techniques. These developments necessitate adequate methods for extracting relevant physical and chemical information from the large datasets, for which a priori information on the structures of various atomic configurations and lattice defects is limited or absent. Here we demonstrate an application of deep neural networks to extracting informationmore » from atomically resolved images including location of the atomic species and type of defects. We develop a “weakly-supervised” approach that uses information on the coordinates of all atomic species in the image, extracted via a deep neural network, to identify a rich variety of defects that are not part of an initial training set. We further apply our approach to interpret complex atomic and defect transformation, including switching between different coordination of silicon dopants in graphene as a function of time, formation of peculiar silicon dimer with mixed 3-fold and 4-fold coordination, and the motion of molecular “rotor”. In conclusion, this deep learning based approach resembles logic of a human operator, but can be scaled leading to significant shift in the way of extracting and analyzing information from raw experimental data.« less

Deep Learning of Atomically Resolved Scanning Transmission Electron Microscopy Images: Chemical Identification and Tracking Local Transformations.

PubMed

Ziatdinov, Maxim; Dyck, Ondrej; Maksov, Artem; Li, Xufan; Sang, Xiahan; Xiao, Kai; Unocic, Raymond R; Vasudevan, Rama; Jesse, Stephen; Kalinin, Sergei V

2017-12-26

Recent advances in scanning transmission electron and scanning probe microscopies have opened exciting opportunities in probing the materials structural parameters and various functional properties in real space with angstrom-level precision. This progress has been accompanied by an exponential increase in the size and quality of data sets produced by microscopic and spectroscopic experimental techniques. These developments necessitate adequate methods for extracting relevant physical and chemical information from the large data sets, for which a priori information on the structures of various atomic configurations and lattice defects is limited or absent. Here we demonstrate an application of deep neural networks to extract information from atomically resolved images including location of the atomic species and type of defects. We develop a "weakly supervised" approach that uses information on the coordinates of all atomic species in the image, extracted via a deep neural network, to identify a rich variety of defects that are not part of an initial training set. We further apply our approach to interpret complex atomic and defect transformation, including switching between different coordination of silicon dopants in graphene as a function of time, formation of peculiar silicon dimer with mixed 3-fold and 4-fold coordination, and the motion of molecular "rotor". This deep learning-based approach resembles logic of a human operator, but can be scaled leading to significant shift in the way of extracting and analyzing information from raw experimental data.

Plastid Phylogenomics Resolve Deep Relationships among Eupolypod II Ferns with Rapid Radiation and Rate Heterogeneity

PubMed Central

Wei, Ran; Yan, Yue-Hong; Harris, AJ; Kang, Jong-Soo; Shen, Hui; Zhang, Xian-Chun

2017-01-01

Abstract The eupolypods II ferns represent a classic case of evolutionary radiation and, simultaneously, exhibit high substitution rate heterogeneity. These factors have been proposed to contribute to the contentious resolutions among clades within this fern group in multilocus phylogenetic studies. We investigated the deep phylogenetic relationships of eupolypod II ferns by sampling all major families and using 40 plastid genomes, or plastomes, of which 33 were newly sequenced with next-generation sequencing technology. We performed model-based analyses to evaluate the diversity of molecular evolutionary rates for these ferns. Our plastome data, with more than 26,000 informative characters, yielded good resolution for deep relationships within eupolypods II and unambiguously clarified the position of Rhachidosoraceae and the monophyly of Athyriaceae. Results of rate heterogeneity analysis revealed approximately 33 significant rate shifts in eupolypod II ferns, with the most heterogeneous rates (both accelerations and decelerations) occurring in two phylogenetically difficult lineages, that is, the Rhachidosoraceae–Aspleniaceae and Athyriaceae clades. These observations support the hypothesis that rate heterogeneity has previously constrained the deep phylogenetic resolution in eupolypods II. According to the plastome data, we propose that 14 chloroplast markers are particularly phylogenetically informative for eupolypods II both at the familial and generic levels. Our study demonstrates the power of a character-rich plastome data set and high-throughput sequencing for resolving the recalcitrant lineages, which have undergone rapid evolutionary radiation and dramatic changes in substitution rates. PMID:28854625