Development of the Vertical Electro Magnetic Profiling (VEMP) method

NASA Astrophysics Data System (ADS)

Miura, Yasuo; Osato, Kazumi; Takasugi, Shinji; Muraoka, Hirofumi; Yasukawa, Kasumi

1996-09-01

As a part of the "Deep-Seated Geothermal Resources Survey (DSGR)" project being undertaken by the New Energy and Industrial Technology Development Organization (NEDO), the "Vertical Electro Magnetic Profiling (VEMP)" method is being developed to accurately obtain deep resistivity structures. The VEMP method takes multi-frequency three-component magnetic field data in an open hole well using controlled source transmitters emitted at the surface (either loop or grounded-wire sources). Numerical simulations using EM3D have demonstrated that phase data of the VEMP method is not only very sensitive to the general resistivity structure, but will also indicate the presence of deeper anomalies. Forward modelling was used to determine the required transmitter moments for various grounded-wire and loop sources for a field test using the WD-1 well in the Kakkonda geothermal area. VEMP logging of the WD-1 well was carried out in May 1994 and the processed field data matches the computer simulations quite well.

Method for providing an arbitrary three-dimensional microstructure in silicon using an anisotropic deep etch

DOEpatents

Morales, Alfredo M.; Gonzales, Marcela

2004-06-15

The present invention describes a method for fabricating an embossing tool or an x-ray mask tool, providing microstructures that smoothly vary in height from point-to-point in etched substrates, i.e., structure which can vary in all three dimensions. The process uses a lithographic technique to transfer an image pattern in the surface of a silicon wafer by exposing and developing the resist and then etching the silicon substrate. Importantly, the photoresist is variably exposed so that when developed some of the resist layer remains. The remaining undeveloped resist acts as an etchant barrier to the reactive plasma used to etch the silicon substrate and therefore provides the ability etch structures of variable depths.

Fabrication and Electrical Characterization of Deep-Submicron Trench-Isolated CMOS Device Structures.

NASA Astrophysics Data System (ADS)

Perera, Asanga Hiran

The magnitude of the extrinsic parasitic MOSFET series resistance was experimentally evaluated in the deep -submicron domain and its consequence on device performance was determined. The series resistance of depletion mode MOSFET test structures were measured for source-drain sizes as small as 0.2 μm by 0.3 μm at room temperature and 100^ circK. To build the test structures a multilevel -full electron beam lithography fabrication process was developed with a pattern overlay accuracy of 75 nm. A new positive tone novalac resist, SYSTEM-9, was developed for electron beam application. The resist had moderate sensitivity, 19-30 muC/cm ^2, and a contrast up to 14. Interrupted development and reduced developer temperature resulted in contrast enhancements of up to 125%. SYSTEM-9 had a two or three times better dry etch resistance than PMMA. A shallow trench isolation technology capable of defining 0.2 μm wide active areas was developed. A rapid thermal annealing based silicidation scheme using TiSi_2 was established. MOSFET sidewall spacer formation using PECVD SiO_2 was calibrated. Antimony and gallium were investigated as possible alternatives to arsenic and boron, respectively, and well behaved substrate diodes were successfully fabricated. Two new patterning techniques for the metal bi-layer metalization of TiW and Al, based on liftoff and reactive ion etching, were developed. The source drain resistance of the test structures was measured at room temperature and at 100^ circK. An LN_2 flushed cold chuck for low temperature device probing was designed and constructed. The temperature dependence of the current voltage characteristics and the extracted series resistance proved that current flow in the contacts was tunneling dominated. The extrinsic source-drain resistance increased rapidly as the contact size decreased below 0.5 mum, and showed an almost two order of magnitude change, when the source-drain area was reduced from 2 x 1.7 mum^2 to 0.2 x 0.3 mum^2 . The effect of this resistance increase on a CMOS inverter switching speed was estimated. A first order empirical model to predict the series resistance was also formulated. Good correspondence was observed between results from the device simulator PISCES-2B and measured data for larger source-drain sizes.

One-step patterning of double tone high contrast and high refractive index inorganic spin-on resist

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zanchetta, E.; Della Giustina, G.; Brusatin, G.

2014-09-14

A direct one-step and low temperature micro-fabrication process, enabling to realize large area totally inorganic TiO₂ micro-patterns from a spin-on resist, is presented. High refractive index structures (up to 2 at 632 nm) without the need for transfer processes have been obtained by mask assisted UV lithography, exploiting photocatalytic titania properties. A distinctive feature not shared by any of the known available resists and boosting the material versatility, is that the system behaves either as a positive or as negative tone resist, depending on the process parameters and on the development chemistry. In order to explain the resist double tonemore » behavior, deep comprehension of the lithographic process parameters optimization and of the resist chemistry and structure evolution during the lithographic process, generally uncommon in literature, is reported. Another striking property of the presented resist is that the negative tone shows a high contrast up to 19, allowing to obtain structures resolution down to 2 μm wide. The presented process and material permit to directly fabricate different titania geometries of great importance for solar cells, photo-catalysis, and photonic crystals applications.« less

Magnetotelluric images of deep crustal structure of the Rehai geothermal field near Tengchong, southern China

NASA Astrophysics Data System (ADS)

Bai, Denghai; Meju, Maxwell A.; Liao, Zhijie

2001-12-01

Broadband (0.004-4096s) magnetotelluric (MT) soundings have been applied to the determination of the deep structure across the Rehai geothermal field in a Quaternary volcanic area near the Indo-Eurasian collisional margin. Tensorial analysis of the data show evidence of weak to strong 3-D effects but for approximate 2-D imaging, we obtained dual-mode MT responses for an assumed strike direction coincident with the trend of the regional-scale faults and with the principal impedance azimuth at long periods. The data were subsequently inverted using different approaches. The rapid relaxation inversion models are comparable to the sections constructed from depth-converted invariant impedance phase data. The results from full-domain 2-D conjugate-gradient inversion with different initial models are concordant and evoke a picture of a dome-like structure consisting of a conductive (<10 Ωm) core zone, c . 2km wide, and a resistive (>50-1000 Ωm) cap which is about 5-6km thick in the central part of the known geothermal field and thickens outwards to about 15-20km. The anomalous structure rests on a mid-crustal zone of 20-30 Ωm resistivity extending down to about 25km depth where there appears to be a moderately resistive (>30 Ωm) substratum. The MT images are shown to be in accord with published geological, isotopic and geochemical results that suggested the presence of a magma body underneath the area of study.

Investigation and development of an effective, economical and efficient concrete pile splice : [summary].

DOT National Transportation Integrated Search

2015-08-01

Large structures like bridges or tall buildings are often built on deep foundations either precast concrete piles or cast-in-place drilled shafts. The pile or shaft must be long enough to reach : a rock layer or to provide sufficient resistance t...

The effects of deep level traps on the electrical properties of semi-insulating CdZnTe

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zha, Gangqiang; Yang, Jian; Xu, Lingyan

2014-01-28

Deep level traps have considerable effects on the electrical properties and radiation detection performance of high resistivity CdZnTe. A deep-trap model for high resistivity CdZnTe was proposed in this paper. The high resistivity mechanism and the electrical properties were analyzed based on this model. High resistivity CdZnTe with high trap ionization energy E{sub t} can withstand high bias voltages. The leakage current is dependent on both the deep traps and the shallow impurities. The performance of a CdZnTe radiation detector will deteriorate at low temperatures, and the way in which sub-bandgap light excitation could improve the low temperature performance canmore » be explained using the deep trap model.« less

Geometries of geoelectrical structures in central Tibetan Plateau from INDEPTH magnetotelluric data

NASA Astrophysics Data System (ADS)

Vozar, Jan; Jones, Alan G.; Le Pape, Florian

2013-04-01

Magnetotelluric (MT) data collected on N-S profiles crossing the Banggong-Nujiang Suture, which separates the Qiangtang and Lhasa Terranes in central Tibet, as a part of InterNational DEep Profiling of Tibet and the Himalaya project (INDEPTH) are modeled by 2D and 3D inversion codes. The 2D deep MT model of line 500 confirms previous observations concluding that the region is characterized to first-order by a resistive upper crust and a conductive, partially melted, middle to lower crust that extends from the Lhasa Terrane to the Qiangtang Terrane with varying depth. The same conductive structure setting, but in shallower depths is also present on the eastern 400 line. From deep electromagnetic sounding, supported by independent 1D integrated petro-physical investigation, we can estimate the next upper-mantle conductive layer at depths from 200 km to 250 km below the Lhasa Terrane and less resistive Tibetan lithosphere below the Qiangtang Terrane with conductive upper-mantle in depths about 120 km. The anisotropic 2D modeling reveals lower crustal anisotropy in Lhasa Terrane, which can interpreted as crustal channel flow. The 3D inversion models of all MT data from central Tibet show dominant 2D regional strike of mid and lower crustal structures equal N110E. This orientation is parallel to Shuanghu suture, BengCo Jiali strike-slip fault system and perpendicular to convergence direction. The lower crust conductor in central Lhasa Terrane can be interpreted more likely as 3D lower Indian crust structure, located to the east from line 500, than geoelectrical anisotropic crustal flow.

Synthesis of photobleachable deep UV resists based on single component nonchemically amplified resist system

NASA Astrophysics Data System (ADS)

Kim, Kyoung-Seon; Kim, Su-Min; Park, Ji-Young; Kim, Jin-Baek

2006-03-01

In a general way, non-CARs consist of the matrix resins and photoactive compounds (PACs), and the dissolution properties of the resists are dependent on the amount of PACs. In common, I-line and G-line resists based on novolac and diazonaphthoquinone (DNQ) are typical non-CARs. But most PACs absorb much light in the deep UV, and they are poorly photobleached by deep UV exposure. This strong absorption of PACs prevents the deep UV light from reaching the bottom of the resist film, leading to scum and sloped pattern profiles. Several PACs which contain diazoketo groups have been reported for deep UV lithography. Our goal in this investigation is to find a proper resist that is processable without photoacid generator and induces both photobleaching in the deep UV regions and polarity change upon exposure. We thought diazoketo groups attached to the polymer side chains could give such effects. There is no necessity for the post-exposure bake step that is the cause of acid-diffusion. The diazoketo groups undergo the Wolff rearrangement upon irradiation in the deep UV, affording ketenes that react with water to provide base soluble photoproducts. The polymers were synthesized by radical copolymerization of 2-(2-diazo-3-oxo-butyryloxy)-ethyl methacrylate, 2-hydroxyethyl methacrylate, and γ-butyrolacton-2-yl methacrylate. The single component resist showed 0.7μm line and space patterns using a mercury-xenon lamp in a contact printing mode.

Rupture mechanism and seismotectonics of the Ms6.5 Ludian earthquake inferred from three-dimensional magnetotelluric imaging

NASA Astrophysics Data System (ADS)

Cai, Juntao; Chen, Xiaobin; Xu, Xiwei; Tang, Ji; Wang, Lifeng; Guo, Chunling; Han, Bing; Dong, Zeyi

2017-02-01

A three-dimensional (3-D) resistivity model around the 2014 Ms6.5 Ludian earthquake was obtained. The model shows that the aftershocks were mainly distributed in a shallow inverse L-shaped conductive angular region surrounded by resistive structures. The presences of this shallow conductive zone may be the key factor leading to the severe damage and surface rupture of the Ludian earthquake. A northwest trending local resistive belt along the Baogunao-Xiaohe fault interrupts the northeast trending conductive zone at the Zhaotong-Lianfeng fault zone in the middle crust, which may be the seismogenic structure of the main shock. Based on the 3-D electrical model, combining with GPS, thermal structure, and seismic survey results, a geodynamic model is proposed to interpret the seismotectonics, deep seismogenic background, and deformation characterized by a sinistral strike slip with a tensile component of the Ludian earthquake.

Experimental study on the influence of chemical sensitizer on pressure resistance in deep water of emulsion explosives

NASA Astrophysics Data System (ADS)

Liu, Lei; zhang, Zhihua; Wang, Ya; Qin, hao

2018-03-01

The study on the pressure resistance performance of emulsion explosives in deep water can provide theoretical basis for underwater blasting, deep-hole blasting and emulsion explosives development. The sensitizer is an important component of emulsion explosives. By using reusable experimental devices to simulate the charge environment in deep water, the influence of the content of chemical sensitizer on the deep-water pressure resistance performance of emulsion explosives was studied. The experimental results show that with the increasing of the content of chemical sensitizer, the deep-water pressure resistance performance of emulsion explosives gradually improves, and when the pressure is fairly large, the effect is particularly pronounced; in a certain range, with the increase of the content of chemical sensitizer, that emulsion explosives’ explosion performance also gradually improve, but when the content reaches a certain value, the explosion properties declined instead; under the same emulsion matrix condition, when the content of NANO2 is 0.2%, that the emulsion explosives has good resistance to water pressure and good explosion properties. The correctness of the results above was testified in model blasting.

Two-dimensional joint inversion of Magnetotelluric and local earthquake data: Discussion on the contribution to the solution of deep subsurface structures

NASA Astrophysics Data System (ADS)

Demirci, İsmail; Dikmen, Ünal; Candansayar, M. Emin

2018-02-01

Joint inversion of data sets collected by using several geophysical exploration methods has gained importance and associated algorithms have been developed. To explore the deep subsurface structures, Magnetotelluric and local earthquake tomography algorithms are generally used individually. Due to the usage of natural resources in both methods, it is not possible to increase data quality and resolution of model parameters. For this reason, the solution of the deep structures with the individual usage of the methods cannot be fully attained. In this paper, we firstly focused on the effects of both Magnetotelluric and local earthquake data sets on the solution of deep structures and discussed the results on the basis of the resolving power of the methods. The presence of deep-focus seismic sources increase the resolution of deep structures. Moreover, conductivity distribution of relatively shallow structures can be solved with high resolution by using MT algorithm. Therefore, we developed a new joint inversion algorithm based on the cross gradient function in order to jointly invert Magnetotelluric and local earthquake data sets. In the study, we added a new regularization parameter into the second term of the parameter correction vector of Gallardo and Meju (2003). The new regularization parameter is enhancing the stability of the algorithm and controls the contribution of the cross gradient term in the solution. The results show that even in cases where resistivity and velocity boundaries are different, both methods influence each other positively. In addition, the region of common structural boundaries of the models are clearly mapped compared with original models. Furthermore, deep structures are identified satisfactorily even with using the minimum number of seismic sources. In this paper, in order to understand the future studies, we discussed joint inversion of Magnetotelluric and local earthquake data sets only in two-dimensional space. In the light of these results and by means of the acceleration on the three-dimensional modelling and inversion algorithms, it is thought that it may be easier to identify underground structures with high resolution.

Magnetotelluric Investigation in the Jiyang Depression and its Adjacent Areas

NASA Astrophysics Data System (ADS)

Zhang, L.; Hao, T.; Duan, Q.

2008-12-01

The Jiyang Depression is a secondary tectonic unit of the Bohai Bay Basin, and is a Mesozoic-Cenozoic continental-facie depositional depression. The Jiyang Depression consists of the Dongying, Zanhua, Chezhen, and Huimin sags, and the Yihezhuang, Chenjiazhuang, Qingcheng, Binxian, Guangrao, Shouguang, and heaves. In order to delineate shallow and deep structures of the depression, we conduct a magnetotelluric (MT) investigation in the Jiyang Depression and its adjacent areas. We use a remote reference setup to reduce noise disturbance, when several magnetotelluric sounding stations are measuring synchronously at different sites. The acquired MT data are to be processed and interpreted. We execute time series processing with the remote reference technique. The surveyed area is seriously interfered by noise. To improve quality of the data, we perform noise identification and manual selection of the time series segments. Identification of polarization modes is an important task for MT data qualitative interpretation. We apply for a PCA (principal component analysis) based method to automatically identify apparent polarized resistivity curves of TE and TM modes. The method recognizes the distortion and major variation of TE and TM curves and distinguishes the two kinds of curves with principal component analysis. From the apparent resistivity-frequency profile result, we can see that the Chenning Uplift and the Chenjiazhuang Heave reveal a 3-layered structure of medium-low-high, from the shallow to the deep. The structure is especially distinct for the Chenning Uplift, where there is a laterally steady-spreading high- resistivity zone corresponding to the frequency band lower than 1 Hz. The Dongying Sag is characteristic of high-low-medium from the shallow to the deep, and has a low-resistivity anomaly zone with obvious and wide lateral extending in the medium frequency band, which reflects that the deposition thickness of the basin is relatively big. The Guangrao Heave and the Shouguang Heave are of a medium-low-high structure from the shallow to the deep. From the impedance phase-frequency profile image, it can be seen that electrical anomalies appear as a large variation in the cross direction, which indicates the complicated features of the research area. We use the 2-D Mackie inversion method to obtain underground electrical distribution of the surveyed area. We select the TE, TM, and joint TE-TM curves to realize inversion processing. The inversion result of the TM mode is used for further interpretation because the fitting conditions of the TM mode is better and the corresponding inversion result coincides well with geologic data. From the inversion result, we can see that the Chenning Uplift and the Changwei Depression to the south of the Guangrao Heave are of high-resistivity. The low-resisitivity range of the Dongying Sag shows that the bottom surface of the basin is about 8-10 km deep, which almost coincides with the published data. Generally speaking, the basement structures of four segments, the Chengning Uplift, the Chenzhen-Chenjiazhuang Heave, the Dongying Sag, and the Changwei Depression, differs greatly, and shows an overall feature that the uplift areas have root while the burial hills in the depression areas are with no root. It may indicate a prospective for pre-Cenozoic oil and gas resources.

Accumulation of antibiotics and heavy metals in meat duck deep litter and their role in persistence of antibiotic-resistant Escherichia coli in different flocks on one duck farm.

PubMed

Lin, Y; Zhao, W; Shi, Z D; Gu, H R; Zhang, X T; Ji, X; Zou, X T; Gong, J S; Yao, W

2017-04-01

Meat duck deep litter is considered to be an ideal environment for the evolution of bacterial antibiotic resistance if it is under poor management. The aim of this study was to characterize the accumulation of antibiotics and heavy metals in the deep litter and their role in the persistence of antibiotic resistance of Escherichia coli, and evaluate the service life of the deep litter. Samples were collected from initial, middle, and final stages of deep litter within 3 barns (zero, 4, and 8 rounds of meat duck fattening, d 34) and 9 flocks, with known consumption of antibiotics in the controlled trail. The feed and litter levels of consumed antibiotics and heavy metals were measured. E. coli (n = 147) was isolated and typed by Eric-PCR and the phylogenetic grouping technique, while minimal inhibitory concentrations of antibiotics and heavy metals were measured. This study confirmed the continuous accumulation of doxycycline and many heavy metals in the deep litter. The population of resistant certain bacteria to doxycycline (16 mg/L, 100 mg/L) or ofloxacin (8 g/mL, 50 g/mL) increased in the used deep litter (rounds 4 and 8). E. coli isolated from the 3 stages of sampling were highly resistant to ampicillin, tetracycline, florfenicol, and doxycycline. Increased resistance to ceftiofur, enrofloxacin, ofloxacin, and gentamicin were seen in the isolates from the final stage of deep litter. In addition, the percentage of isolates tolerant to zinc, copper, and cadmium and the numbers of Group-B2 isolates all increased in the used deep litter, and the isolates of each stage belonged predominantly to commensal groups. The antibiotic resistance of isolates with identical Eric-PCR patterns had improved from round 4 to 8, and differences still existed in the resistance profiles of isolates with identical Eric-PCR patterns from different barns of the same round. This study concluded that deep litter could be suitable for the evolution of bacterial antibiotic-resistance under conditions of continuous usage or accumulation of antibiotics and heavy metals without proper management. © 2016 Poultry Science Association Inc.

Electrical resistivity structure at the North-Central Turkey inferred from three-dimensional magnetotellurics

NASA Astrophysics Data System (ADS)

Özaydın, Sinan; Tank, Sabri Bülent; Karaş, Mustafa

2018-03-01

Magnetotelluric data analyses and three-dimensional modeling techniques were implemented to investigate the crustal electrical structure in the North-Central Turkey, along a 190-km-long profile crossing Çankırı Basin, İzmir-Ankara-Erzincan Suture Zone and Central Pontides. In this area, the segment of the North Anatolian Fault (NAF) shows 280-km-long restraining bend, where it was near the focus of the hazardous 1943 Tosya Earthquake (M: 7.6). Structure around the NAF exhibits resistive characteristics at both sides of the fault reaching to at least 25 km of depth. Fluids below the brittle-ductile transition were not detected which will nucleate earthquakes in the area. This resistive structure implies an asperity zone of the NAF, which was ruptured in 1943. The presence of a fluid-bearing upwelling conductive anomaly in Central Pontides may suggest that beneath the deep brittle crust, there may exists a fluid-enriched conductive forearc region, which may have caused by a prograde source related to paleo-tectonic processes.

Atelocollagen sponge and recombinant basic fibroblast growth factor combination therapy for resistant wounds with deep cavities.

PubMed

Nakanishi, Asako; Hakamada, Arata; Isoda, Ken-ichi; Mizutani, Hitoshi

2005-05-01

Recent advances in bioengineering have introduced materials that enhance wound healing. Even with such new tools, some deep ulcers surrounded by avascular tissues, including bone, tendon, and fascia, are resistant to various therapies and easily form deep cavities with loss of subcutaneous tissue. Atelocollagen sponges have been used as an artificial dermis to cover full-thickness skin defects. Topical recombinant human basic fibroblast growth factor has been introduced as a growth factor to induce fibroblast proliferation in skin ulcers. We applied these materials in combination in two patients with deep resistant wounds: one with a cavity reaching the mediastinum through a divided sternum and one with deep necrotic wounds caused by electric burns. These wounds did not respond to the topical basic fibroblast growth factor alone. In contrast, the combination therapy closed the wounds rapidly without further surgical treatment. This combination therapy is a potent treatment for resistant wounds with deep cavities.

Mutations Related to Antiretroviral Resistance Identified by Ultra-Deep Sequencing in HIV-1 Infected Children under Structured Interruptions of HAART

PubMed Central

Vazquez-Guillen, Jose Manuel; Palacios-Saucedo, Gerardo C.; Rivera-Morales, Lydia G.; Garcia-Campos, Jorge; Ortiz-Lopez, Rocio; Noguera-Julian, Marc; Paredes, Roger; Vielma-Ramirez, Herlinda J.; Ramirez, Teresa J.; Chavez-Garcia, Marcelino; Lopez-Guillen, Paulo; Briones-Lara, Evangelina; Sanchez-Sanchez, Luz M.; Vazquez-Martinez, Carlos A.; Rodriguez-Padilla, Cristina

2016-01-01

Although Structured Treatment Interruptions (STI) are currently not considered an alternative strategy for antiretroviral treatment, their true benefits and limitations have not been fully established. Some studies suggest the possibility of improving the quality of life of patients with this strategy; however, the information that has been obtained corresponds mostly to studies conducted in adults, with a lack of knowledge about its impact on children. Furthermore, mutations associated with antiretroviral resistance could be selected due to sub-therapeutic levels of HAART at each interruption period. Genotyping methods to determine the resistance profiles of the infecting viruses have become increasingly important for the management of patients under STI, thus low-abundance antiretroviral drug-resistant mutations (DRM’s) at levels under limit of detection of conventional genotyping (<20% of quasispecies) could increase the risk of virologic failure. In this work, we analyzed the protease and reverse transcriptase regions of the pol gene by ultra-deep sequencing in pediatric patients under STI with the aim of determining the presence of high- and low-abundance DRM’s in the viral rebounds generated by the STI. High-abundance mutations in protease and high- and low-abundance mutations in reverse transcriptase were detected but no one of these are directly associated with resistance to antiretroviral drugs. The results could suggest that the evaluated STI program is virologically safe, but strict and carefully planned studies, with greater numbers of patients and interruption/restart cycles, are still needed to evaluate the selection of DRM’s during STI. PMID:26807922

DeepARG: a deep learning approach for predicting antibiotic resistance genes from metagenomic data.

PubMed

Arango-Argoty, Gustavo; Garner, Emily; Pruden, Amy; Heath, Lenwood S; Vikesland, Peter; Zhang, Liqing

2018-02-01

Growing concerns about increasing rates of antibiotic resistance call for expanded and comprehensive global monitoring. Advancing methods for monitoring of environmental media (e.g., wastewater, agricultural waste, food, and water) is especially needed for identifying potential resources of novel antibiotic resistance genes (ARGs), hot spots for gene exchange, and as pathways for the spread of ARGs and human exposure. Next-generation sequencing now enables direct access and profiling of the total metagenomic DNA pool, where ARGs are typically identified or predicted based on the "best hits" of sequence searches against existing databases. Unfortunately, this approach produces a high rate of false negatives. To address such limitations, we propose here a deep learning approach, taking into account a dissimilarity matrix created using all known categories of ARGs. Two deep learning models, DeepARG-SS and DeepARG-LS, were constructed for short read sequences and full gene length sequences, respectively. Evaluation of the deep learning models over 30 antibiotic resistance categories demonstrates that the DeepARG models can predict ARGs with both high precision (> 0.97) and recall (> 0.90). The models displayed an advantage over the typical best hit approach, yielding consistently lower false negative rates and thus higher overall recall (> 0.9). As more data become available for under-represented ARG categories, the DeepARG models' performance can be expected to be further enhanced due to the nature of the underlying neural networks. Our newly developed ARG database, DeepARG-DB, encompasses ARGs predicted with a high degree of confidence and extensive manual inspection, greatly expanding current ARG repositories. The deep learning models developed here offer more accurate antimicrobial resistance annotation relative to current bioinformatics practice. DeepARG does not require strict cutoffs, which enables identification of a much broader diversity of ARGs. The DeepARG models and database are available as a command line version and as a Web service at http://bench.cs.vt.edu/deeparg .

Implementation of LRFD geotechnical design for deep foundations using Texas Cone Penetrometer (TCP) test.

DOT National Transportation Integrated Search

2015-09-01

This study provides resistance factors (I) for design of deep foundations to implement Load and Resistance Factor Design (LRFD) for bridge foundations using Texas Cone Penetrometer (TCP) Test data. Initial efforts were made to determine resistance fa...

Deep crustal structure between the Selkirk Crest, Idaho and the Whitefish Range, Montana from magnetotelluric imaging

NASA Astrophysics Data System (ADS)

Bedrosian, P. A.; Box, S. E.; Pellerin, L.

2006-12-01

The Middle Proterozoic Belt Basin, spanning parts of Montana, Idaho, Washington, and British Columbia, is one of the deepest basins in North America. More than 18 km of fine-grained sedimentary strata were deposited rapidly between 1.5-1.4 Ga and split by rifting during late Proterozoic development of the North American passive margin. Basin strata were relatively undeformed until Mesozoic Cordilleran thrusting and early Eocene extension. Many outstanding questions require an understanding of deep basin structure, including the flexural load of the Basin, its role during Cordilleran deformation, and controls on ore-forming fluids that produced stratabound Cu-Ag deposits within the Basin. Long-period (deep-crustal) and broadband (shallow-crustal) magnetotelluric (MT) data were collected in 2005 along a 140 km transect within the central Belt Basin, with an average site spacing of 4 km. A portion of the transect is coincident with two deep-crustal seismic reflection profiles (COCORP lines MT-2 and ID-2). The data generally confirm the NW strike of the Sylvanite anticline and Purcell anticlinorium and the more northerly strike of the Libby Thrust Belt. A best-fit, two-dimensional (2D) resistivity model was generated from the MT data down to 50 km. The model is characterized by two subhorizontal, highly conductive horizons. A shallow horizon at 10-15 km depth begins 10 km west of the Whitefish Range front and continues to the west for 60 km to an abrupt end beneath the Sylvanite anticline. A deeper highly-conductive, concave-up layer occurs at 25-35 km depth from just west of southern Lake Koocanusa to an abrupt end about 20 km east of the Purcell trench. From that point west to the Selkirk Crest, the entire crust is very resistive. A crude resistivity stratigraphy is delineated: highly resistive (>104 Ømega m) middle and upper Belt Supergroup (above the Prichard Fm.), moderately conductive (30-1000 Ømega m) Prichard Fm. (to the present depth of exposure), a highly conductive (1-10 Ømega m) sub-Prichard layer (below the lowest Prichard unit mapped at the surface), and moderately to highly resistive (103-104 Ømega m) pre-Belt crystalline basement. The Eocene Purcell trench detachment fault can be traced dipping 25-30° east down to about 20 km depth, flattening along the base of the shallow conductive layer to its eastern end, fully 100 km east of the surface trace of the fault. Realignment of the eastern edges of the shallow and deep conductive layers produces a single west-dipping horizon and suggests about 35 km of Eocene top-to-the-east extension along the northern Purcell trench detachment fault. Reversal of that displacement reveals the crustal structure as it existed at the end of late Mesozoic Cordilleran thrusting. A major thrust decollement at 10-12 km, well-defined below the Sylvanite anticline, occurs below the deepest exposed Prichard units but above the shallow conductive layer. The shallow and deep conductive layers are suggested to be thrust repetitions of a single original layer separated by a thrust imbricate of Archean crystalline basement, 35 km wide and 5-8 km thick, centered below the Sylvanite anticline. The conductive layers are interpreted as sub-Prichard sedimentary strata with disseminated carbonaceous matter or sulfide grains interconnected by shearing. This interpretation is consistent with disseminated sulfides within the lowest exposed Prichard, and emphasizes the dramatic increase in conductivity effected by shearing. Total Cordilleran thrust shortening of 150-200 km is indicated.

Fabrication of large area woodpile structure in polymer

NASA Astrophysics Data System (ADS)

Gupta, Jaya Prakash; Dutta, Neilanjan; Yao, Peng; Sharkawy, Ahmed S.; Prather, Dennis W.

2009-02-01

A fabrication process of three-dimensional Woodpile photonic crystals based on multilayer photolithography from commercially available photo resist SU8 have been demonstrated. A 6-layer, 2 mm × 2mm woodpile has been fabricated. Different factors that influence the spin thickness on multiple resist application have been studied. The fabrication method used removes, the problem of intermixing, and is more repeatable and robust than the multilayer fabrication techniques for three dimensional photonic crystal structures that have been previously reported. Each layer is developed before next layer photo resist spin, instead of developing the whole structure in the final step as used in multilayer process. The desired thickness for each layer is achieved by the calibration of spin speed and use of different photo resist compositions. Deep UV exposure confinement has been the defining parameter in this process. Layer uniformity for every layer is independent of the previous developed layers and depends on the photo resist planarizing capability, spin parameters and baking conditions. The intermixing problem, which results from the previous layers left uncrossed linked photo resist, is completely removed in this process as the previous layers are fully developed, avoiding any intermixing between the newly spun and previous layers. Also this process gives the freedom to redo every spin any number of times without affecting the previously made structure, which is not possible in other multilayer process where intermediate developing is not performed.

The electrodeposition of silver composites using deep eutectic solvents.

PubMed

Abbott, Andrew P; El Ttaib, Khalid; Frisch, Gero; Ryder, Karl S; Weston, David

2012-02-21

Silver is an important metal for electronic connectors, however, it is extremely soft and wear can be a significant issue. This paper describes how improved wear resistant silver coatings can be obtained from the electrolytic deposition of silver from a solution of AgCl in an ethylene glycol/choline chloride based Deep Eutectic Solvent. An up to 10-fold decrease in the wear volume is observed by the incorporation of SiC or Al(2)O(3) particles. The work also addresses the fundamental aspect of speciation of silver chloride in solution using EXAFS to probe solution structure. The size but not the nature of the composite particles is seen to change the morphology and grain size of the silver deposit. Grain sizes are shown to be consistent with previous nucleation studies. The addition of LiF is found to significantly affect the deposit morphology and improve wear resistance.

Long regional magnetotelluric profile crossing geotectonic structures of central Poland

NASA Astrophysics Data System (ADS)

Stefaniuk, M.; Pokorski, J.; Wojdyla, M.

2009-04-01

Introduction The magnetotelluric survey was made along a regional profile, which runs across Poland from south-west to north-east during 2005-2006 years. The profile crosses major geological structures of Central Poland, including the Variscan Externides and Variscan foredeep, the Transeuropean Suture Zone and the marginal zone of East European Craton. The main objectives of the project include identification of sub-Zechstein sedimentary structures and evaluation of resistivity distribution within the deep crust, especially at the contact of East European Precambrian Craton and Central Europe Paleozoic structures. The length of the profile is about 700 km; 161 deep magnetotelluric sounding sites were made with a medium spacing of about 4 km. Data acquisition and processing The recording of the components of natural electromagnetic field was made with a broad range of frequencies, varying from 0.0003 Hz up to 575 Hz with use of MT-1 system of Electromagnetic Instruments Incorporation. This frequency band allowed obtaining the information about geology ranging from a few dozen meters to approximately 100 km, depending on the vertical distribution of the resistivity inside geological medium. To reduce the electromagnetic noise, magnetic and electric remote reference was applied. A remote reference site was located at a distance of over 100 km of field sites. Processing of the recorded data included the estimation of the components of impedance tensor (Zxx, Zxy, Zyx and Zyy ), with use of robust type procedures. The components of the impedance tensor allowed in a subsequent step for calculation of field curves for two orientations of the measurement system (XY - described further as the TM mode and YX - TE mode) and additional parameters of the medium like skew, strike, pole diagrams etc. Recording of the vertical component of electromagnetic field (Hz) allowed calculation of tipper parameter T. Magnetotelluric soundings interpretation Geophysical interpretation of MT sounding data was made based on 1D and 2D inversion. The upper part of the geological section is built of relatively flat layers, hence a 1D interpretation model could be effectively applied. Starting models for 1D inversion were constructed based on results of electromagnetic well-logging and some well-documented seismic horizons. Initial models for 2D inversion were constructed with the use of results of 1D magnetotelluric sounding inversion and structural model of the upper part of cross-section based on seismic data interpretation. 2D inversion was performed in two steps with use of NLCG and SBI algorithms. At first step of inversion high-frequency range of data was used and constraints based on borehole data was applied. Inversion in second step was made with starting model constructed based on results of first one and with stabilizing resistivity distribution in upper part of cross-section. Of great interest is varied resistivity of the formation resting between the Zechstein evaporate complex, and the crystalline basement. Interpretation of results of magnetotelluric soundings provide a lot of new information. The main tectonic boundaries were distinguished and location of sediments of different lithology reflected in resistivity differentiation was defined. Some new deep tectonic elements were recognized at the zone of Fore-Sudetic Block and Fore-Sudetic Monocline. Substantial differentiation of resistivity of crystalline massif of the East European Craton basement was discovered. Zones of low resistivity are probably connected with development of metamorphic processes or reflects location of big faults. Geological cross- section based on resistivity distribution was constructed. Deep model of regional structures based on resistivity distribution was suggested as well. Acknowledgments. This paper was based on results of investigations carried out by the PBG Geophysical Exploration Company Ltd. financed by the Minister of Environment through National Found for Environment Protection and Water Resources. The authors used also results of statutory research of Department of General Geology, Environment Protection and Geotourism, UST AGH, financed by the Minister of Science and Higher Education (project no 11.11.140.447). Geophysical interpretation was carried out using softwares by EMI, and Geosystem WingLinkTM.

Resistivity structures across the Humboldt River basin, north-central Nevada

USGS Publications Warehouse

Rodriguez, Brian D.; Williams, Jackie M.

2002-01-01

Magnetotelluric data collected along five profiles show deep resistivity structures beneath the Battle Mountain-Eureka and Carlin gold trends in north-central Nevada, which appear consistent with tectonic breaks in the crust that possibly served as channels for hydrothermal fluids. It seems likely that gold deposits along these linear trends were, therefore, controlled by deep regional crustal fault systems. Two-dimensional resistivity modeling of the magnetotelluric data generally show resistive (30 to 1,000 ohm-m) crustal blocks broken by sub-vertical, two-dimensional, conductive (1 to 10 ohmm) zones that are indicative of large-scale crustal fault zones. These inferred fault zones are regional in scale, trend northeast-southwest, north-south, and northwest-southeast, and extend to mid-crustal (20 km) depths. The conductors are about 2- to 15-km wide, extend from about 1 to 4 km below the surface to about 20 km depth, and show two-dimensional electrical structure. By connecting the locations of similar trending conductors together, individual regional crustal fault zones within the upper crust can be inferred that range from about 4- to 10-km wide and about 30- to 150-km long. One of these crustal fault zones coincides with the Battle Mountain-Eureka mineral trend. The interpreted electrical property sections also show regional changes in the resistive crust from south to north. Most of the subsurface in the upper 20 km beneath Reese River Valley and southern Boulder Valley are underlain by rock that is generally more conductive than the subsurface beneath Kelly Creek Basin and northern Boulder Valley. This suggests that either elevated-temperature or high-salinity fluids, alteration, or carbonaceous rocks are more pervasive in the more conductive area (Battle Mountain Heat-Flow High), which implies that the crust beneath these valleys is either more fractured or has more carbonaceous rocks than in the area surveyed along the 41st parallel.

Stakeholders Opinions on Multi-Use Deep Water Offshore Platform in Hsiao-Liu-Chiu, Taiwan

PubMed Central

Sie, Ya-Tsune; Chang, Yang-Chi; Lu, Shiau-Yun

2018-01-01

This paper describes a group model building activity designed to elicit the potential effects a projected multi-use deep water offshore platform may have on its local environment, including ecological and socio-economic issues. As such a platform is proposed for construction around the island of Hsiao-Liu-Chiu, Taiwan, we organized several meetings with the local stakeholders and structured the debates using group modeling methods to promote consensus. During the process, the participants iteratively built and revised a causal-loop diagram that summarizes their opinions. Overall, local stakeholders concluded that a multi-use deep water offshore marine platform might have beneficial effects for Hsiao-Liu-Chiu because more tourists and fish could be attracted by the structure, but they also raised some potential problems regarding the law in Taiwan and the design of the offshore platform, especially its resistance to extreme weather. We report the method used and the main results and insights gained during the process. PMID:29415521

A magnetotelluric feasibility study of the Alps

NASA Astrophysics Data System (ADS)

Ritter, O.; Weckmann, U.

2016-12-01

The Alps are a famous and extensive mountain range system in central Europe. The mountains were formed as the African and Eurasian tectonic plates collided and they have been a prime target for geological and geophysical investigations since the beginning of modern geosciences. Consequently, the Alps have been investigated with active and passive seismological methods and extensive sets of potential field data exist. Hardly anything is known, however, about the deep electrical conductivity structure, as it has been notoriously difficult to acquire magnetotelluric (MT) data in the Alps. The Alps are densely populated and a lot of infrastructure for tourism has been built over the years. MT measurements, which rely on natural variations of the electromagnetic background fields, are severely hampered by this man-made noise. Here, we report on a feasibility study to acquire MT data in the Alps, where all stations are deployed outside the valleys, on high mountain ranges and alpine pastures. Overall we recorded MT data at 7 stations, along an approximately north-south profile centred on Mayrhofen in the Austrian Alps. The average station spacing was 5 kilometers. The data were processed using robust remote-reference processing and the results clearly show that MT measurements are feasible. We used Mare2DEM for 2D inversion to include a somewhat realistic topography. The 2D section indicates moderate resistivity for the top 2 - 5 km, consistent with the regional geology, which suggests (meta-) sedimentary sequences. From depths of 5 km and below resistivities exceed 5,000 Ohmm. This means we can sense very deep with MT but also, that we should be cautious with an interpretation of this short profile. The data also clearly indicate 3D effects. We therefore propose to deploy an array of stations covering the entire Alps in USArray style, e.g. with a station spacing of approximately 50 km, to derive a 3D model of the deep electrical resistivity structure of the Alps. Such a model could also serve as reference for more detailed investigations of key structures such as major fault systems or nappe structures. It will be essential to install stations on high ground, as far away as possible from valleys and cultural installations.

Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lu, Z.; Deng, Y.; Nostrand, J.D. Van

2011-06-15

The Deepwater Horizon oil spill in the Gulf of Mexico is the deepest and largest offshore spill in U.S. history and its impacts on marine ecosystems are largely unknown. Here, we showed that the microbial community functional composition and structure were dramatically altered in a deep-sea oil plume resulting from the spill. A variety of metabolic genes involved in both aerobic and anaerobic hydrocarbon degradation were highly enriched in the plume compared to outside the plume, indicating a great potential for intrinsic bioremediation or natural attenuation in the deep-sea. Various other microbial functional genes relevant to carbon, nitrogen, phosphorus, sulfurmore » and iron cycling, metal resistance, and bacteriophage replication were also enriched in the plume. Together, these results suggest that the indigenous marine microbial communities could play a significant role in biodegradation of oil spills in deep-sea environments.« less

Reconnaissance de la structure géologique du bassin de saïss occidental, Maroc, par sondages électriquesPreliminary survey of the structure and hydrogeology of the western Saiss Basin, Morocco, using electrical resistivity

NASA Astrophysics Data System (ADS)

Essahlaoui, A.; Sahbi, H.; Bahi, L.; El-Yamine, N.

2001-05-01

A geophysical study, based on 96 electrical resistivity measurements with a line length up to 4 km, was performed in the southern and southwestern parts of the Meknes Plateau, Morocco, which is a part of the Saiss Basin, located between the Rif Range to the north and the Middle Atlas Range to the south. This basin, whose maximum depth is ˜ 1.5 km in the north, is filled with Triassic to Quaternary deposits overlying the Palæozoic basement and includes two main aquifers. The interpretation of the resistivity measurements, calibrated from deep boreholes, made it possible to obtain a new hydrogeological model for the Saiss Basin. The understanding of the basin structure is of primary importance for the water supply of this area, which has been affected by severe droughts in recent years.

Recent advances in 193-nm single-layer photoresists based on alternating copolymers of cycloolefins

NASA Astrophysics Data System (ADS)

Houlihan, Francis M.; Wallow, Thomas I.; Timko, Allen G.; Neria, E.; Hutton, Richard S.; Cirelli, Raymond A.; Nalamasu, Omkaram; Reichmanis, Elsa

1997-07-01

We report on our recent investigations on the formulation and processing of 193 nm single layer photoresists based on alternating copolymers of cycloolefins with maleic anhydride. Resists formulated with cycloolefin copolymers are compatible with 0.262 N tetramethylammonium developers, have excellent adhesion, sensitivity, etch resistance and thermal flow properties. The effect of polymer structure and composition, dissolution inhibitor structure and loading as well as the effect of the photoacid generator on the resist dissolution properties was investigated. Based on the results high contrast formulations were evaluated on a GCA XLS (NA equals 0.53, 4X reduction optics) deep-UV stepper to exhibit 0.27 micrometer L/S pair resolution with excellent photosensitivity. Based on the dissolution properties and a spectroscopic examination of the resist, we have designed materials that show less than 0.17 micrometer L/S pair resolution with 193 nm exposures. In this paper, the formulation methodology is detailed and the most recent results upon both with 248 and 193 nm irradiation are described.

Mapping the "Depression Switch" During Intraoperative Testing of Subcallosal Cingulate Deep Brain Stimulation.

PubMed

Choi, Ki Sueng; Riva-Posse, Patricio; Gross, Robert E; Mayberg, Helen S

2015-11-01

The clinical utility of monitoring behavioral changes during intraoperative testing of subcallosal cingulate deep brain stimulation is unknown. To characterize the structural connectivity correlates of deep brain stimulation-evoked behavioral effects using probabilistic tractography in depression. Categorization of acute behavioral effects was conducted in 9 adults undergoing deep brain stimulation implantation surgery for chronic treatment-resistant depression in a randomized and blinded testing session at Emory University. Patients were studied from September 1, 2011, through June 30, 2013. Post hoc analyses of the structural tractography patterns mediating distinct categories of evoked behavioral effects were defined, including the best response overall. Data analyses were performed from May 1 through July 1, 2015. Categorization of stimulation-induced transient behavioral effects and delineation of the shared white matter tracts mediating response subtypes. Among the 9 patients, 72 active and 36 sham trials were recorded. The following stereotypical behavior patterns were identified: changes in interoceptive (noted changes in body state in 30 of 72 active and 4 of 36 sham trials) and in exteroceptive (shift in attention from patient to others in 9 of 72 active and 0 sham trials) awareness. The best response was a combination of exteroceptive and interoceptive changes at a single left contact for all 9 patients. Structural connectivity showed that the best response contacts had a pattern of connections to the bilateral ventromedial frontal cortex (via forceps minor and left uncinate fasciculus) and to the cingulate cortex (via left cingulum bundle), whereas behaviorally salient but nonbest contacts had only cingulate involvement. The involvement of the 3 white matter bundles during stimulation of the best contacts suggests a mechanism for the observed transient "depression switch." This analysis of transient behavior changes during intraoperative deep brain stimulation of the subcallosal cingulate and the subsequent identification of unique connectivity patterns may provide a biomarker of a rapid-onset depression switch to guide surgical implantation and to refine and optimize algorithms for the selection of contacts in long-term stimulation for treatment-resistant depression.

High Speed Trimaran (HST) Seatrain Experiments, Model 5714

DTIC Science & Technology

2013-12-01

Marine Highway 1 Historical Seatrains 1 Objectives 2 Hull &: Model Description 4 Data Acquisition and Instrumentation 7 Carriage II - Deep ...Operational Demonstration Measurement System 10 Experimental Procedures 10 Carriage II - Deep Water Basin Test 10 Calm Water Resistance 11... Deep Water Basin Analysis 17 Calm Water Resistance 17 Longitudinal Flow Through The Propeller Plane 18 Body Forces & Moments 18

Evaluation of static resistance of deep foundations.

DOT National Transportation Integrated Search

2017-05-01

The focus of this research was to evaluate and improve Florida Department of Transportation (FDOT) FB-Deep software prediction of nominal resistance of H-piles, prestressed concrete piles in limestone, large diameter (> 36) open steel and concrete...

Project: Micromachined High-Frequency Circuits For Sub-mm-wave Sensors

NASA Technical Reports Server (NTRS)

Papapolymerou, Ioannis John

2004-01-01

A novel micromachined resonator at 45 GHz based on a defect in a periodic electromagnetic bandgap structure (EBG) and a two-pole Tchebysbev filter with 1.4% 0.15 dB equiripple bandwidth and 2.3 dB loss employing this resonator are presented in this letter. The periodic bandgap structure is realized on a 400 micron thick high-resistivity silicon wafer using deep reactive ion etching techniques. The resonator and filter can be accessed via coplanar waveguide feeds.

Comparison of deep and superficial abdominal muscle activity between experienced Pilates and resistance exercise instructors and controls during stabilization exercise.

PubMed

Moon, Ji-Hyun; Hong, Sang-Min; Kim, Chang-Won; Shin, Yun-A

2015-06-01

Pilates and resistance exercises are used for lumbar stabilization training. However, it is unclear which exercise is more effective for lumbar stabilization. In our study, we aimed to compare surface muscle activity and deep muscle thickness during relaxation and spinal stabilization exercise in experienced Pilates and resistance exercise instructors. This study is a retrospective case control study set in the Exercise Prescription Laboratory and Sports Medicine Center. The participants included Pilates instructors (mean years of experience, 3.20±1.76; n=10), resistance exercise instructors (mean years of experience, 2.53±0.63; n=10), and controls (n=10). The participants performed 4 different stabilization exercises: abdominal drawing-in maneuver, bridging, roll-up, and one-leg raise. During the stabilization exercises, surface muscle activity was measured with electromyography, whereas deep muscle thickness was measured by ultrasound imaging. During the 4 stabilization exercises, the thickness of the transverse abdominis (TrA) was significantly greater in the Pilates-trained group than the other 2 other groups. The internal oblique (IO) thickness was significantly greater in the Pilates- and resistance-trained group than the control group, during the 4 exercises. However, the surface muscle activities were similar between the groups. Both Pilates and resistance exercise instructors had greater activation of deep muscles, such as the TrA and IO, than the control subjects. Pilates and resistance exercise are both effective for increasing abdominal deep muscle thickness.

Comparison of deep and superficial abdominal muscle activity between experienced Pilates and resistance exercise instructors and controls during stabilization exercise

PubMed Central

Moon, Ji-Hyun; Hong, Sang-Min; Kim, Chang-Won; Shin, Yun-A

2015-01-01

Pilates and resistance exercises are used for lumbar stabilization training. However, it is unclear which exercise is more effective for lumbar stabilization. In our study, we aimed to compare surface muscle activity and deep muscle thickness during relaxation and spinal stabilization exercise in experienced Pilates and resistance exercise instructors. This study is a retrospective case control study set in the Exercise Prescription Laboratory and Sports Medicine Center. The participants included Pilates instructors (mean years of experience, 3.20±1.76; n=10), resistance exercise instructors (mean years of experience, 2.53±0.63; n=10), and controls (n=10). The participants performed 4 different stabilization exercises: abdominal drawing-in maneuver, bridging, roll-up, and one-leg raise. During the stabilization exercises, surface muscle activity was measured with electromyography, whereas deep muscle thickness was measured by ultrasound imaging. During the 4 stabilization exercises, the thickness of the transverse abdominis (TrA) was significantly greater in the Pilates-trained group than the other 2 other groups. The internal oblique (IO) thickness was significantly greater in the Pilates- and resistance-trained group than the control group, during the 4 exercises. However, the surface muscle activities were similar between the groups. Both Pilates and resistance exercise instructors had greater activation of deep muscles, such as the TrA and IO, than the control subjects. Pilates and resistance exercise are both effective for increasing abdominal deep muscle thickness. PMID:26171383

"Fool Me Once, Shame on You; Fool Me Twice, Shame on Me": African American Students' Reclamation of Smartness as Resistance

ERIC Educational Resources Information Center

Twyman Hoff, Pamela

2016-01-01

In African American culture competing value systems shape the definition and value of smartness. This article will explore African American "sayins" as a tool to transmit the counter-hegemonic cultural value of smartness. "Sayins," a facet of the African American oral tradition, are drawn from the deep structures of African…

Can multi-scale calibrations allow MT-derived resistivities to be used to probe the structure of the deep crust?

NASA Astrophysics Data System (ADS)

Toy, Virginia; Billia, Marco; Easingwood, Richard; Kirilova, Martina; Kluge, Emma; Sauer, Katrina; Sutherland, Rupert; Timms, Nicholas; Townend, John

2017-04-01

Our current knowledge of microstructural and mechanical controls on rock resistivity is such that identical magnetotelluric (MT) anomalies could result from a highly mineralized but extinct shear zone, or from an unmineralized, fluid saturated, active shear zone. In pursuit of the ability to interpret the structure and activity (rather than just the presence) of buried geological structures from electromagnetic data, we are investigating correlations between rock structure and electrical properties of ductile shear zone rocks recovered from the active Alpine Fault Zone, New Zealand. Multi-scale measurements of resistivity exist for this zone: its ductile portions have anomalously high electrical conductivity identified in MT models constructed as part of the South Island Geophysical Transect (SIGHT). Additionally wireline resistivities were measured in situ to 820 m depth during the recent Deep Fault Drilling Project (DFDP-2), and resisistivity of hand samples has been measured at laboratory conditions [Kluge et al., Abstract EGU2017-10139]. In exhumed and borehole samples, the distributions and arrangements of conductivity carriers - graphite, amorphous carbon, and grain boundary pores that would have contained brines or other conductive fluids at depth, have been characterised. These vary systematically according to the total ductile shear strain they have accommodated [Kirilova et al., Abstract EGU2017-5773; Sauer et al., Abstract EGU2017-10485]. Transmission electron microscopy analyses of grain boundaries also indicate that they contain carbon. The next phases of our investigation involve: (i) construction of crustal fluid composition models by quantitative microstructural and compositional/mineralogical mapping of fluid remnants and their solid residues and calibration of these using in situ measurements of fluid composition in DFDP-2 at depths to 820 m; (ii) calculation of resistivities for real microstructures based on electrical properties of the individual component minerals and fluids - for microstructures fully characterised in three-dimensions; (iii) measurement of the effects of dynamic linking of phases during ductile creep of solid rock on complex resistivity of DFDP samples at a range of realistic crustal temperatures and pressures. A particular challenge in this study is to determine appropriate scaling relationships of electrical properties among samples, boreholes, and MT models because dielectric constants of minerals depend on frequency of the imposed current, which varies with scale and, consequently, measurement method. We invite discussion of strategies to overcome this.

Mechanisms Of The Dissolution Inhibition Effect And Their Application To Designing Novel Deep-UV Resists

NASA Astrophysics Data System (ADS)

Murata, Makoto; Koshiba, Mitsunobu; Harita, Yoshiyuki

1989-08-01

The dissolution inhibition effect and alkaline solubility were investigated for naphthoquinone diazides like 1,2-naphthoquinone diazide (NQD), its 5-sulfonylchloride (NQD-C) and 5-sulfonyloxybenzene (DAM), and for other compounds like sulfonylchlorides, sulfonyl esters, sulfones and a ketone which do not contain a naphthoquinone diazide moiety. As a result, it has turned out that the dissolution inhibition effect does not depend on the specific structure; namely, the naphthoquinone diazide moiety itself, but largely on the alkaline solubility of the compounds added to a novolak resin. An XPS study for the films consisting of a novolak resin and a dissolution inhibitor indicates a formation of an inhibitor-rich protective thin layer on the film surface after immersion of the film in an alkaline developer. In this paper is proposed a new third dissolution inhibition mechanism in addition to the previously reported chemical crosslinking and dipolar interaction; i.e., the alkaline insoluble protective layer inhibits the dissolution of novolak resin at the interface between the film and the developer. A new three-component type deep-UV resist has been also developed as an application of the new mechanism. The resist consists of a novolak resin, 5-diazo Meldrum's acid and a new dissolution inhibitors like phenyltosylate and p-phenylene ditosylate, which successfully improve the residual resist thickness.

The reduction in fatigue crack growth resistance of dentin with depth.

PubMed

Ivancik, J; Neerchal, N K; Romberg, E; Arola, D

2011-08-01

The fatigue crack growth resistance of dentin was characterized as a function of depth from the dentino-enamel junction. Compact tension (CT) specimens were prepared from the crowns of third molars in the deep, middle, and peripheral dentin. The microstructure was quantified in terms of the average tubule dimensions and density. Fatigue cracks were grown in-plane with the tubules and characterized in terms of the initiation and growth responses. Deep dentin exhibited the lowest resistance to the initiation of fatigue crack growth, as indicated by the stress intensity threshold (ΔK(th) ≈ 0.8 MPa•m(0.5)) and the highest incremental fatigue crack growth rate (over 1000 times that in peripheral dentin). Cracks in deep dentin underwent incremental extension under cyclic stresses that were 40% lower than those required in peripheral dentin. The average fatigue crack growth rates increased significantly with tubule density, indicating the importance of microstructure on the potential for tooth fracture. Molars with deep restorations are more likely to suffer from the cracked-tooth syndrome, because of the lower fatigue crack growth resistance of deep dentin.

Alisiaquinones and alisiaquinol, dual inhibitors of Plasmodium falciparum enzyme targets from a New Caledonian deep water sponge.

PubMed

Desoubzdanne, Denis; Marcourt, Laurence; Raux, Roselyne; Chevalley, Séverine; Dorin, Dominique; Doerig, Christian; Valentin, Alexis; Ausseil, Frédéric; Debitus, Cécile

2008-07-01

Four new meroterpenes, alisiaquinones A-C (1-3) and alisiaquinol (4), were isolated from a New Caledonian deep water sponge. Their structures and relative stereochemistry were elucidated by spectroscopic data analysis. They are related to xestoquinone, but showed unusual substitution on a tetrahydrofuran junction. They displayed micromolar range activity on two enzymatic targets of importance for the control of malaria, the plasmodial kinase Pfnek-1 and a protein farnesyl transferase, as well as on different chloroquine-sensitive and -resistant strains of Plasmodium falciparum. Alisiaquinone C displayed a submicromolar activity on P. falciparum and a competitive selectivity index on the different plasmodial strains.

Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats.

PubMed

Alcaide, María; Stogios, Peter J; Lafraya, Álvaro; Tchigvintsev, Anatoli; Flick, Robert; Bargiela, Rafael; Chernikova, Tatyana N; Reva, Oleg N; Hai, Tran; Leggewie, Christian C; Katzke, Nadine; La Cono, Violetta; Matesanz, Ruth; Jebbar, Mohamed; Jaeger, Karl-Erich; Yakimov, Michail M; Yakunin, Alexander F; Golyshin, Peter N; Golyshina, Olga V; Savchenko, Alexei; Ferrer, Manuel

2015-02-01

The present study provides a deeper view of protein functionality as a function of temperature, salt and pressure in deep-sea habitats. A set of eight different enzymes from five distinct deep-sea (3040-4908 m depth), moderately warm (14.0-16.5°C) biotopes, characterized by a wide range of salinities (39-348 practical salinity units), were investigated for this purpose. An enzyme from a 'superficial' marine hydrothermal habitat (65°C) was isolated and characterized for comparative purposes. We report here the first experimental evidence suggesting that in salt-saturated deep-sea habitats, the adaptation to high pressure is linked to high thermal resistance (P value = 0.0036). Salinity might therefore increase the temperature window for enzyme activity, and possibly microbial growth, in deep-sea habitats. As an example, Lake Medee, the largest hypersaline deep-sea anoxic lake of the Eastern Mediterranean Sea, where the water temperature is never higher than 16°C, was shown to contain halopiezophilic-like enzymes that are most active at 70°C and with denaturing temperatures of 71.4°C. The determination of the crystal structures of five proteins revealed unknown molecular mechanisms involved in protein adaptation to poly-extremes as well as distinct active site architectures and substrate preferences relative to other structurally characterized enzymes. © 2014 Society for Applied Microbiology and John Wiley & Sons Ltd.

Low-abundance HIV drug-resistant viral variants in treatment-experienced persons correlate with historical antiretroviral use.

PubMed

Le, Thuy; Chiarella, Jennifer; Simen, Birgitte B; Hanczaruk, Bozena; Egholm, Michael; Landry, Marie L; Dieckhaus, Kevin; Rosen, Marc I; Kozal, Michael J

2009-06-29

It is largely unknown how frequently low-abundance HIV drug-resistant variants at levels under limit of detection of conventional genotyping (<20% of quasi-species) are present in antiretroviral-experienced persons experiencing virologic failure. Further, the clinical implications of low-abundance drug-resistant variants at time of virologic failure are unknown. Plasma samples from 22 antiretroviral-experienced subjects collected at time of virologic failure (viral load 1380 to 304,000 copies/mL) were obtained from a specimen bank (from 2004-2007). The prevalence and profile of drug-resistant mutations were determined using Sanger sequencing and ultra-deep pyrosequencing. Genotypes were interpreted using Stanford HIV database algorithm. Antiretroviral treatment histories were obtained by chart review and correlated with drug-resistant mutations. Low-abundance drug-resistant mutations were detected in all 22 subjects by deep sequencing and only in 3 subjects by Sanger sequencing. In total they accounted for 90 of 247 mutations (36%) detected by deep sequencing; the majority of these (95%) were not detected by standard genotyping. A mean of 4 additional mutations per subject were detected by deep sequencing (p<0.0001, 95%CI: 2.85-5.53). The additional low-abundance drug-resistant mutations increased a subject's genotypic resistance to one or more antiretrovirals in 17 of 22 subjects (77%). When correlated with subjects' antiretroviral treatment histories, the additional low-abundance drug-resistant mutations correlated with the failing antiretroviral drugs in 21% subjects and correlated with historical antiretroviral use in 79% subjects (OR, 13.73; 95% CI, 2.5-74.3, p = 0.0016). Low-abundance HIV drug-resistant mutations in antiretroviral-experienced subjects at time of virologic failure can increase a subject's overall burden of resistance, yet commonly go unrecognized by conventional genotyping. The majority of unrecognized resistant mutations correlate with historical antiretroviral use. Ultra-deep sequencing can provide important historical resistance information for clinicians when planning subsequent antiretroviral regimens for highly treatment-experienced patients, particularly when their prior treatment histories and longitudinal genotypes are not available.

Low-Abundance HIV Drug-Resistant Viral Variants in Treatment-Experienced Persons Correlate with Historical Antiretroviral Use

PubMed Central

Le, Thuy; Chiarella, Jennifer; Simen, Birgitte B.; Hanczaruk, Bozena; Egholm, Michael; Landry, Marie L.; Dieckhaus, Kevin; Rosen, Marc I.; Kozal, Michael J.

2009-01-01

Background It is largely unknown how frequently low-abundance HIV drug-resistant variants at levels under limit of detection of conventional genotyping (<20% of quasi-species) are present in antiretroviral-experienced persons experiencing virologic failure. Further, the clinical implications of low-abundance drug-resistant variants at time of virologic failure are unknown. Methodology/Principal Findings Plasma samples from 22 antiretroviral-experienced subjects collected at time of virologic failure (viral load 1380 to 304,000 copies/mL) were obtained from a specimen bank (from 2004–2007). The prevalence and profile of drug-resistant mutations were determined using Sanger sequencing and ultra-deep pyrosequencing. Genotypes were interpreted using Stanford HIV database algorithm. Antiretroviral treatment histories were obtained by chart review and correlated with drug-resistant mutations. Low-abundance drug-resistant mutations were detected in all 22 subjects by deep sequencing and only in 3 subjects by Sanger sequencing. In total they accounted for 90 of 247 mutations (36%) detected by deep sequencing; the majority of these (95%) were not detected by standard genotyping. A mean of 4 additional mutations per subject were detected by deep sequencing (p<0.0001, 95%CI: 2.85–5.53). The additional low-abundance drug-resistant mutations increased a subject's genotypic resistance to one or more antiretrovirals in 17 of 22 subjects (77%). When correlated with subjects' antiretroviral treatment histories, the additional low-abundance drug-resistant mutations correlated with the failing antiretroviral drugs in 21% subjects and correlated with historical antiretroviral use in 79% subjects (OR, 13.73; 95% CI, 2.5–74.3, p = 0.0016). Conclusions/Significance Low-abundance HIV drug-resistant mutations in antiretroviral-experienced subjects at time of virologic failure can increase a subject's overall burden of resistance, yet commonly go unrecognized by conventional genotyping. The majority of unrecognized resistant mutations correlate with historical antiretroviral use. Ultra-deep sequencing can provide important historical resistance information for clinicians when planning subsequent antiretroviral regimens for highly treatment-experienced patients, particularly when their prior treatment histories and longitudinal genotypes are not available. PMID:19562031

The habenula in neurosurgery for depression: A convergence of functional neuroanatomy, psychiatry and imaging.

PubMed

Skandalakis, Georgios P; Koutsarnakis, Christos; Kalyvas, Aristotelis V; Skandalakis, Panagiotis; Johnson, Elizabeth O; Stranjalis, George

2018-05-05

The habenula is a small, mostly underrated structure in the pineal region. Multidisciplinary findings demonstrate an underlying complex connectivity of the habenula with the rest of the brain, subserving its major role in normal behavior and the pathophysiology of depression. These findings suggest the potential application of "habenular psychosurgery" in the treatment of mental disorders. The remission of two patients with treatment-resistant major depression treated with deep brain stimulation of the habenula supported the hypothesis that the habenula is an effective target for deep brain stimulation and initiated a surge of basic science research. This review aims to assess the viability of the deep brain stimulation of the habenula as a treatment option for treatment resistant depression. PubMed and the Cochrane Library databases were searched with no chronological restrictions for the identification of relevant articles. The results of this review are presented in a narrative form describing the functional neuroanatomy of the human habenula, its implications in major depression, findings of electrode implantation of this region and findings of deep brain stimulation of the habenula for the treatment of depression. Data assessing the hypothesis are scarce. Nonetheless, findings highlight the major role of the habenula in normal, as well as in pathological brain function, particularly in depression disorders. Moreover, findings of studies utilizing electrode implantation in the region of the habenula underscore our growing realization that research in neuroscience and deep brain stimulation complement each other in a reciprocal relationship; they are as self-reliant, as much as they depend on each other. Copyright © 2018. Published by Elsevier B.V.

Enhancing the color gamut of white displays using novel deep-blue organic fluorescent dyes to form color-changed thin films with improved efficiency

NASA Astrophysics Data System (ADS)

Liu, Wei-ting; Huang, Wen-Yao

2012-06-01

This study used novel fluorescence based deep-blue-emitting molecules, namely BPVPDA, an organic fluorescence color thin film using BPVPDA exhibit deep blue fluorine with CIE coordinates of (0.13,0.16). The developed original Organic RGB color thin film technology enables the optimization of the distinctive features of an organic light emitting diode (OLED) and (TFT) LCD display. The color filter structure maintains the same high resolution to obtain a higher level of brightness, in comparison with conventional organic RGB color thin film. The image-processing engine is designed to achieve a sharp text image for a thin-film-transistor (TFT) LCD with organic color thin films. The organic color thin films structure uses organic dye dopent in limpid photo resist. With this technology , the following characteristics can be obtained: (1) high color reproduction of gamut ratio, and (2) improved luminous efficiency with organic color fluorescence thin film. This performance is among the best results ever reported for a color-filter used on TFT-LCD and OLED.

Design and Analysis of Complex D-Regions in Reinforced Concrete Structures

ERIC Educational Resources Information Center

Yindeesuk, Sukit

2009-01-01

STM design provisions, such as those in Appendix A of ACI318-08, consist of rules for evaluating the capacity of the load-resisting truss that is idealized to carry the forces through the D-Region. These code rules were primarily derived from test data on simple D-Regions such as deep beams and corbels. However, these STM provisions are taken as…

Development of variable LRFD \\0x03C6 factors for deep foundation design due to site variability [summary].

DOT National Transportation Integrated Search

2012-01-01

Both the Florida Department of Transportation : (FDOT) and the Federal Highway Administration : (FHWA) specify use of fixed resistance factors () : for Load and Resistance Factored Design (LRFD) of : deep foundations, depending on design approach :...

Imaging the magmatic system of Mono Basin, California with magnetotellurics in three--dimensions

USGS Publications Warehouse

Peacock, Jared R.; Mangan, Margaret T.; McPhee, Darcy K.; Ponce, David A.

2015-01-01

A three–dimensional (3D) electrical resistivity model of Mono Basin in eastern California unveils a complex subsurface filled with zones of partial melt, fluid–filled fracture networks, cold plutons, and regional faults. In 2013, 62 broadband magnetotelluric (MT) stations were collected in an array around southeastern Mono Basin from which a 3D electrical resistivity model was created with a resolvable depth of 35 km. Multiple robust electrical resistivity features were found that correlate with existing geophysical observations. The most robust features are two 300 ± 50 km3 near-vertical conductive bodies (3–10 Ω·m) that underlie the southeast and north-eastern margin of Mono Craters below 10 km depth. These features are interpreted as magmatic crystal–melt mush zones of 15 ± 5% interstitial melt surrounded by hydrothermal fluids and are likely sources for Holocene eruptions. Two conductive east–dipping structures appear to connect each magma source region to the surface. A conductive arc–like structure (< 0.9 Ω·m) links the northernmost mush column at 10 km depth to just below vents near Panum Crater, where the high conductivity suggests the presence of hydrothermal fluids. The connection from the southernmost mush column at 10 km depth to below South Coulée is less obvious with higher resistivity (200 Ω·m) suggestive of a cooled connection. A third, less constrained conductive feature (4–10 Ω·m) 15 km deep extending to 35 km is located west of Mono Craters near the eastern front of the Sierra Nevada escarpment, and is coincident with a zone of sporadic, long–period earthquakes that are characteristic of a fluid-filled (magmatic or metamorphic) fracture network. A resistive feature (103–105 Ω·m) located under Aeolian Buttes contains a deep root down to 25 km. The eastern edge of this resistor appears to structurally control the arcuate shape of Mono Craters. These observations have been combined to form a new conceptual model of the magmatic system beneath Mono Craters to a depth of 30 km.

Emergent HIV-1 Drug Resistance Mutations Were Not Present at Low-Frequency at Baseline in Non-Nucleoside Reverse Transcriptase Inhibitor-Treated Subjects in the STaR Study

PubMed Central

Porter, Danielle P.; Daeumer, Martin; Thielen, Alexander; Chang, Silvia; Martin, Ross; Cohen, Cal; Miller, Michael D.; White, Kirsten L.

2015-01-01

At Week 96 of the Single-Tablet Regimen (STaR) study, more treatment-naïve subjects that received rilpivirine/emtricitabine/tenofovir DF (RPV/FTC/TDF) developed resistance mutations compared to those treated with efavirenz (EFV)/FTC/TDF by population sequencing. Furthermore, more RPV/FTC/TDF-treated subjects with baseline HIV-1 RNA >100,000 copies/mL developed resistance compared to subjects with baseline HIV-1 RNA ≤100,000 copies/mL. Here, deep sequencing was utilized to assess the presence of pre-existing low-frequency variants in subjects with and without resistance development in the STaR study. Deep sequencing (Illumina MiSeq) was performed on baseline and virologic failure samples for all subjects analyzed for resistance by population sequencing during the clinical study (n = 33), as well as baseline samples from control subjects with virologic response (n = 118). Primary NRTI or NNRTI drug resistance mutations present at low frequency (≥2% to 20%) were detected in 6.6% of baseline samples by deep sequencing, all of which occurred in control subjects. Deep sequencing results were generally consistent with population sequencing but detected additional primary NNRTI and NRTI resistance mutations at virologic failure in seven samples. HIV-1 drug resistance mutations emerging while on RPV/FTC/TDF or EFV/FTC/TDF treatment were not present at low frequency at baseline in the STaR study. PMID:26690199

Emergent HIV-1 Drug Resistance Mutations Were Not Present at Low-Frequency at Baseline in Non-Nucleoside Reverse Transcriptase Inhibitor-Treated Subjects in the STaR Study.

PubMed

Porter, Danielle P; Daeumer, Martin; Thielen, Alexander; Chang, Silvia; Martin, Ross; Cohen, Cal; Miller, Michael D; White, Kirsten L

2015-12-07

At Week 96 of the Single-Tablet Regimen (STaR) study, more treatment-naïve subjects that received rilpivirine/emtricitabine/tenofovir DF (RPV/FTC/TDF) developed resistance mutations compared to those treated with efavirenz (EFV)/FTC/TDF by population sequencing. Furthermore, more RPV/FTC/TDF-treated subjects with baseline HIV-1 RNA >100,000 copies/mL developed resistance compared to subjects with baseline HIV-1 RNA ≤100,000 copies/mL. Here, deep sequencing was utilized to assess the presence of pre-existing low-frequency variants in subjects with and without resistance development in the STaR study. Deep sequencing (Illumina MiSeq) was performed on baseline and virologic failure samples for all subjects analyzed for resistance by population sequencing during the clinical study (n = 33), as well as baseline samples from control subjects with virologic response (n = 118). Primary NRTI or NNRTI drug resistance mutations present at low frequency (≥2% to 20%) were detected in 6.6% of baseline samples by deep sequencing, all of which occurred in control subjects. Deep sequencing results were generally consistent with population sequencing but detected additional primary NNRTI and NRTI resistance mutations at virologic failure in seven samples. HIV-1 drug resistance mutations emerging while on RPV/FTC/TDF or EFV/FTC/TDF treatment were not present at low frequency at baseline in the STaR study.

Variations in collagen fibrils network structure and surface dehydration of acid demineralized intertubular dentin: effect of dentin depth and air-exposure time.

PubMed

Fawzy, Amr S

2010-01-01

The aim was to characterize the variations in the structure and surface dehydration of acid demineralized intertubular dentin collagen network with the variations in dentin depth and time of air-exposure (3, 6, 9 and 12 min). In addition, to study the effect of these variations on the tensile bond strength (TBS) to dentin. Phosphoric acid demineralized superficial and deep dentin specimens were prepared. The structure of the dentin collagen network was characterized by AFM. The surface dehydration was characterized by probing the nano-scale adhesion force (F(ad)) between AFM tip and intertubular dentin surface as a new experimental approach. The TBS to dentin was evaluated using an alcohol-based dentin self-priming adhesive. AFM images revealed a demineralized open collagen network structure in both of superficial and deep dentin at 3 and 6 min of air-exposure. However, at 9 min, superficial dentin showed more collapsed network structure compared to deep dentin that partially preserved the open network structure. Total collapsed structure was found at 12 min for both of superficial and deep dentin. The value of the F(ad) is decreased with increasing the time of air-exposure and is increased with dentin depth at the same time of air-exposure. The TBS was higher for superficial dentin at 3 and 6 min, however, no difference was found at 9 and 12 min. The ability of the demineralized dentin collagen network to resist air-dehydration and to preserve the integrity of open network structure with the increase in air-exposure time is increased with dentin depth. Although superficial dentin achieves higher bond strength values, the difference in the bond strength is decreased by increasing the time of air-exposure. The AFM probed F(ad) showed to be sensitive approach to characterize surface dehydration, however, further researches are recommended regarding the validity of such approach.

Progress in performance enhancement methods for capacitive silicon resonators

NASA Astrophysics Data System (ADS)

Van Toan, Nguyen; Ono, Takahito

2017-11-01

In this paper, we review the progress in recent studies on the performance enhancement methods for capacitive silicon resonators. We provide information on various fabrication technologies and design considerations that can be employed to improve the performance of capacitive silicon resonators, including low motional resistance, small insertion loss, and high quality factor (Q). This paper contains an overview of device structures and working principles, fabrication technologies consisting of hermetic packaging, deep reactive-ion etching and neutral beam etching, and design considerations including mechanically coupled, movable electrode structures and piezoresistive heat engines.

Geophysical data reveal the crustal structure of the Alaska Range orogen within the aftershock zone of the Mw 7.9 Denali fault earthquake

USGS Publications Warehouse

Fisher, M.A.; Ratchkovski, N.A.; Nokleberg, W.J.; Pellerin, L.; Glen, J.M.G.

2004-01-01

Geophysical information, including deep-crustal seismic reflection, magnetotelluric (MT), gravity, and magnetic data, cross the aftershock zone of the 3 November 2002 Mw 7.9 Denali fault earthquake. These data and aftershock seismicity, jointly interpreted, reveal the crustal structure of the right-lateral-slip Denali fault and the eastern Alaska Range orogen, as well as the relationship between this structure and seismicity. North of the Denali fault, strong seismic reflections from within the Alaska Range orogen show features that dip as steeply as 25?? north and extend downward to depths between 20 and 25 km. These reflections reveal crustal structures, probably ductile shear zones, that most likely formed during the Late Cretaceous, but these structures appear to be inactive, having produced little seismicity during the past 20 years. Furthermore, seismic reflections mainly dip north, whereas alignments in aftershock hypocenters dip south. The Denali fault is nonreflective, but modeling of MT, gravity, and magnetic data suggests that the Denali fault dips steeply to vertically. However, in an alternative structural model, the Denali fault is defined by one of the reflection bands that dips to the north and flattens into the middle crust of the Alaska Range orogen. Modeling of MT data indicates a rock body, having low electrical resistivity (>10 ??-m), that lies mainly at depths greater than 10 km, directly beneath aftershocks of the Denali fault earthquake. The maximum depth of aftershocks along the Denali fault is 10 km. This shallow depth may arise from a higher-than-normal geothermal gradient. Alternatively, the low electrical resistivity of deep rocks along the Denali fault may be associated with fluids that have weakened the lower crust and helped determine the depth extent of the after-shock zone.

Geometries of geoelectrical structures in central Tibetan Plateau from INDEPTH magnetotelluric data

NASA Astrophysics Data System (ADS)

Vozar, J.; Jones, A. G.; Le Pape, F.

2012-12-01

Magnetotelluric (MT) data collected on N-S profiles crossing the Banggong-Nujiang Suture (BNS), which separates the Qiangtang and Lhasa Terranes in central Tibet, as a part of InterNational DEep Profiling of Tibet and the Himalaya project (INDEPTH) are modeled by 2D, 3D inversion codes and 1D petro-physical package LitMod. The modeling exhibits regional resistive and conductive structures correlated with ShuangHu Suture, Tanggula Mountains and strike-slip faults like BengCo-Jiali fault in the south. The BNS is not manifested in the geoelectrical models as a strong crustal regional structure. The strike direction azimuth of mid and lower crustal structures estimated from horizontal slices from 3D modeling (N110°E) is slightly different from one estimated by 2D strike analysis (N100°E). Orientation of crustal structures is perpendicular to convergence direction in this area. The deepest lower crustal conductors are correlated to areas with maximum Moho depth obtained from satellite gravity data. The anisotropic 2D modeling reveals that lower crustal conductor in Lhasa Terrane is anisotropic. This anisotropy can be interpreted as a proof for crustal channel flow below Lhasa Terrane. But same Lhasa lower crust conductor from isotropic 3D modeling can be interpreted more likely as 3D lower Indian crust structure, located to the east from line 500, than geoelectrical anisotropic crustal flow. From deep electromagnetic sounding, supported by independent integrated petro-physical investigation, we can estimate the next upper-mantle conductive layer at depths from 200 km to 250 km below the Lhasa Terrane and less resistive Tibetan lithosphere below the Qiangtang Terrane with conductive upper-mantle in depths about 120 km.

Indolo[3,2-a]carbazoles from a deep-water sponge of the genus Asteropus.

PubMed

Russell, Floyd; Harmody, Dedra; McCarthy, Peter J; Pomponi, Shirley A; Wright, Amy E

2013-10-25

Two new indolo[3,2-a]carbazoles (1, 2) were isolated from a deep-water collection of a sponge of the genus Asteropus. The structures of 1 and 2 were determined through the analysis of spectroscopic data including mass spectrometry and 2D-NMR. Compound 1 showed minimum inhibitory concentrations of 25 μg/mL against the fungal pathogen Candida albicans and 50 μg/mL against methicillin-resistant Staphylococcus aureus (MRSA). Compounds 1 and 2 showed no cytotoxicity against the PANC1 human pancreatic carcinoma and NCI/ADR-RES ovarian adenocarcinoma cell lines at our standard test concentration of 5 μg/mL.

Indolo[3,2-a]carbazoles from a Deep-Water Sponge of the Genus Asteropus

PubMed Central

2013-01-01

Two new indolo[3,2-a]carbazoles (1, 2) were isolated from a deep-water collection of a sponge of the genus Asteropus. The structures of 1 and 2 were determined through the analysis of spectroscopic data including mass spectrometry and 2D-NMR. Compound 1 showed minimum inhibitory concentrations of 25 μg/mL against the fungal pathogen Candida albicans and 50 μg/mL against methicillin-resistant Staphylococcus aureus (MRSA). Compounds 1 and 2 showed no cytotoxicity against the PANC1 human pancreatic carcinoma and NCI/ADR-RES ovarian adenocarcinoma cell lines at our standard test concentration of 5 μg/mL. PMID:24063539

Tunnel-injected sub-260 nm ultraviolet light emitting diodes

NASA Astrophysics Data System (ADS)

Zhang, Yuewei; Krishnamoorthy, Sriram; Akyol, Fatih; Bajaj, Sanyam; Allerman, Andrew A.; Moseley, Michael W.; Armstrong, Andrew M.; Rajan, Siddharth

2017-05-01

We report on tunnel-injected deep ultraviolet light emitting diodes (UV LEDs) configured with a polarization engineered Al0.75Ga0.25 N/In0.2Ga0.8 N tunnel junction structure. Tunnel-injected UV LED structure enables n-type contacts for both bottom and top contact layers. However, achieving Ohmic contact to wide bandgap n-AlGaN layers is challenging and typically requires high temperature contact metal annealing. In this work, we adopted a compositionally graded top contact layer for non-alloyed metal contact and obtained a low contact resistance of ρc = 4.8 × 10-5 Ω cm2 on n-Al0.75Ga0.25 N. We also observed a significant reduction in the forward operation voltage from 30.9 V to 19.2 V at 1 kA/cm2 by increasing the Mg doping concentration from 6.2 × 1018 cm-3 to 1.5 × 1019 cm-3. Non-equilibrium hole injection into wide bandgap Al0.75Ga0.25 N with Eg>5.2 eV was confirmed by light emission at 257 nm. This work demonstrates the feasibility of tunneling hole injection into deep UV LEDs and provides a structural design towards high power deep-UV emitters.

Structures of the West African Craton Margin across southern Mauritania inferred from a 450-km geoelectrical profile

NASA Astrophysics Data System (ADS)

Ritz, M.; Robineau, B.; Vassal, J.; Bellion, Y.; Dukhan, M.

1989-04-01

Magnetotelluric (MT) measurements were carried out at 20 sites, extending 450 km across southern Mauritania in order to study lithospheric structures related to the West African craton (WAC) margin. The MT profile starts to the west on the Senegal-Mauritania basin (S-M basin), traverses across the Mauritanides orogenic belt, and terminates on the western border of the WAC (Taoudeni basin). Distortion effects due to local shallow inhomogeneities are present in nearly all of the basin data. In such a situation, the preliminary interpretation of the data was done by using 1D inversions based upon rotationally invariant parameters. Such distortion is not apparent for the belt and craton sites, and 1D inversions were followed by 2D modeling. The models produced reveal a clear crustal subdivision into a resistive upper crust underlain by a two-layer lower crust with two conductors, one at mid-crustal depths (supposed fluid-produced) beneath the S-M basin and the second at the base of the crust beneath the WAC. The 14-km-thick conductive material below the Mauritanides belt is interpreted as large imbricated thrusts representing the deep roots of the Mauritanides nappes. The models also show that significant contrasts in resistivity extend deep in the lithosphere between the cratonic area and the Senegal microplate.

Deep conductivity characteristics and preliminary acquaintance of the Lushan earthquake, east edge of Tibetan Plateau, China

NASA Astrophysics Data System (ADS)

Zhou, J.; Wang, X.; Wang, Y.; Min, G.

2013-12-01

1. Introduction The Longmenshan foreland basin developed as a flexural foredeep at western Yangtze Platfrom during the Late Triassic Indosinian orogeny with strong tectonic activity. 2008 Wenchuan earthquake (Mw7.9) happened along the middle segment of the Longmenshan overthrusting belt. 2013 Lushan earthquake (Mw6.6) occurred along the south segment of Longmenshan tectonic zone which belongs to seismic gap during the Wenchuan earthquake. The recent researches ( Yan Zhan etc., 2013; Zhuqi Zhang etc., 2013; Xiwei Xu etc., 2013) indicate that the Lushan earthquake may closely related to the activity of Longmenshan ';s piedmont fault zone while the seismogenic fault and other issues are still controversial. In order to provide an electromagnetic basis in deep earthquake area structure, we detect magnetotelluric(MT) sounding in Lushan earthquake zone to obtain the electrical structure characteristics of Longmenshan's south segment. 2. Data acquisition and processing To research the deep electrical structure of earthquake zone assigning a MT profile through the epicenter which transects the Sichuan platform concave, Longmenshan tectonic belt and Songpan-Ganzi fold system. To analysis the MT data, we carried out the impedance tensor decompositionincluding the swift rotation and bahr method which based on the phase deviation. Ultimately, NLCG method was adopted to inverse MT data. 3. Conclusion The result of MT data discloses deep electrical structure feature of the southern section of Longmenshan overthrusting belt: the burial depth of conductive layer in the upper crust of Songpan-Ganzi plot is larger than that of middle-northern part; there is no conductive zone in Longmenshan high resistance body which connect with the high conductivity layer in the crust of the western section of Songpan-Ganzi plot; there exists a relatively large range of conductive zone in the basin to Longmenshan tectonic belt, which is mostly related to the piedmont of concealed fault zone and resistive intermediate belt at the edge of western basin. Be different form Wenchuan earthquake, Lushan earthquake located in the south of Longmenshan tectonic zone which have a strong connection with the piedmont fault. MT research reveals the difference of the deep electrical structure between the south of Longmenshan tectonic belt and the middle-north belt, from which we can infer that the seismogenic environment are not the same. The epicenter of Lushan earthquake occurred in the east edge of Longmenshan tectonic belt which close to Longmenshan ';s piedmont fault combine with the MT inversion infer that Lushan earthquake has a stronger relationship with Longmenshan ';s piedmont fault. Because of the short term of our work, now further work is ongoing.

The undercooling of liquids

NASA Technical Reports Server (NTRS)

Turnbull, D.

1984-01-01

The formation by melt quenching of such metastable structures as glassy or microcrystalline solids and highly supersaturated solutions is made possible by the extreme resistance of most melts to homophase crystal nucleation at deep undercooling. This nucleation resistance contrasts sharply with the very low kinetic resistance to the movement of crystal-melt interfaces, once formed, in metals and other fluid systems at even minute undercooling. The methods of nucleation study which have proven especially effective in bypassing nucleation by heterophase impurities thereby exposing the high resistance of melts to homophase nucleation may be summarized as follows: observation of the crystallization behavior of dispersed small droplets; drop tube experiments in which liquid drops solidify, under containerless conditions, during their fall in the tube; and observation of the crystallization of bulk specimens immersed in fluxes chosen to dissolve or otherwise deactivate (e.g., by wetting) heterophase nucleants. This method has proven to be remarkably effective in deactivating such nucleants in certain pure metals.

Characterizing structures on borehole images and logging data of the Nankai trough accretionary prism: new insights

NASA Astrophysics Data System (ADS)

Jurado, Maria Jose

2016-04-01

IODP has extensively used the D/V Chikyu to drill the Kumano portion of the Nankai Trough, including two well sites within the Kumano Basin. IODP Expeditions 338 and 348 drilled deep into the inner accretionary prism south of the Kii Peninsula collecting a suite of LWD data, including natural gamma ray, electrical resistivity logs and borehole images, suitable to characterize structures (fractures and faults) inside the accretionary prism. Structural interpretation and analysis of logging-while-drilling data in the deep inner prism revealed intense deformation of a generally homogenous lithology characterized by bedding that dips steeply (60-90°) to the NW, intersected by faults and fractures. Multiple phases of deformation are characterized. IODP Expedition borehole images and LWD data acquired in the last decade in previous and results of NantroSEIZE IODP Expeditions (314, 319) were also analyzed to investigate the internal geometries and structures of the Nankai Trough accretionary prism. This study focused mainly on the characterization of the different types of structures and their specific position within the accretionary prism structures. New structural constraints and methodologies as well as a new approach to the characterization of study of active structures inside the prism will be presented.

A deep crustal fluid channel into the San Andreas Fault system near Parkfield, California

USGS Publications Warehouse

Becken, M.; Ritter, O.; Park, S.K.; Bedrosian, P.A.; Weckmann, U.; Weber, M.

2008-01-01

Magnetotelluric (MT) data from 66 sites along a 45-km-long profile across the San Andreas Fault (SAF) were inverted to obtain the 2-D electrical resistivity structure of the crust near the San Andreas Fault Observatory at Depth (SAFOD). The most intriguing feature of the resistivity model is a steeply dipping upper crustal high-conductivity zone flanking the seismically defined SAF to the NE, that widens into the lower crust and appears to be connected to a broad conductivity anomaly in the upper mantle. Hypothesis tests of the inversion model suggest that upper and lower crustal and upper-mantle anomalies may be interconnected. We speculate that the high conductivities are caused by fluids and may represent a deep-rooted channel for crustal and/or mantle fluid ascent. Based on the chemical analysis of well waters, it was previously suggested that fluids can enter the brittle regime of the SAF system from the lower crust and mantle. At high pressures, these fluids can contribute to fault-weakening at seismogenic depths. These geochemical studies predicted the existence of a deep fluid source and a permeable pathway through the crust. Our resistivity model images a conductive pathway, which penetrates the entire crust, in agreement with the geochemical interpretation. However, the resistivity model also shows that the upper crustal branch of the high-conductivity zone is located NE of the seismically defined SAF, suggesting that the SAF does not itself act as a major fluid pathway. This interpretation is supported by both, the location of the upper crustal high-conductivity zone and recent studies within the SAFOD main hole, which indicate that pore pressures within the core of the SAF zone are not anomalously high, that mantle-derived fluids are minor constituents to the fault-zone fluid composition and that both the volume of mantle fluids and the fluid pressure increase to the NE of the SAF. We further infer from the MT model that the resistive Salinian block basement to the SW of the SAFOD represents an isolated body, being 5-8km wide and reaching to depths >7km, in agreement with aeromagnetic data. This body is separated from a massive block of Salinian crust farther to the SW. The NE terminus of resistive Salinian crust has a spatial relationship with a near-vertical zone of increased seismic reflectivity ???15km SW of the SAF and likely represents a deep-reaching fault zone. ?? 2008 The Authors Journal compilation ?? 2008 RAS.

Development of Eddy Current Techniques for Detection of Deep Fatigue Cracks in Multi-Layer Airframe Components

NASA Technical Reports Server (NTRS)

Wincheski, Russell A.

2008-01-01

Thick, multi-layer aluminum structure has been widely used in aircraft design in critical wing splice areas. The multi-layer structure generally consists of three or four aluminum layers with different geometry and varying thickness, which are held together with fasteners. The detection of cracks under fasteners with ultrasonic techniques in subsurface layers away from the skin is impeded primarily by interlayer bonds and faying sealant condition. Further, assessment of such sealant condition is extremely challenging in terms of complexity of structure, limited access, and inspection cost. Although Eddy current techniques can be applied on in-service aircraft from the exterior of the skin without knowing sealant condition, the current eddy current techniques are not able to detect defects with wanted sensitivity. In this work a series of low frequency eddy current probes have been designed, fabricated and tested for this application. A probe design incorporating a shielded magnetic field sensor concentrically located in the interior of a drive coil has been employed to enable a localized deep diffusion of the electromagnetic field into the part under test. Due to the required low frequency inspections, probes have been testing using a variety of magnetic field sensors (pickup coil, giant magneto-resistive, anisotropic magneto-resistive, and spin-dependent tunneling). The probe designs as well as capabilities based upon a target inspection for sub-layer cracking in an airframe wing spar joint is presented.

3D Modeling of the Deep Groundwater System at Mount Shasta, California, Using Finite Difference and Inverse Modeling in Combination with Magnetotellurics

NASA Astrophysics Data System (ADS)

Webb, C. H.; Foglia, L.; Fogg, G. E.; McClain, J.

2017-12-01

Precipitation in mountainous systems is responsible for much of the world's freshwater supply. Volcanic mountains in particular may have the capacity to store large amounts of groundwater, due to the relatively high permeability of volcanic rocks as compared to fractured crystalline rocks. These qualities make volcanic aquifers likely candidates for laterally extensive deep groundwater systems. However, the depth extent of these aquifers is not well understood and has been little studied, due to the dearth of well data in most mountain systems. When determining a water budget, especially for mountainous regions, it is necessary to understand the extent of the entire system, including the deep components. Mount Shasta of the California cascade volcanoes is one potential case of a deep groundwater system with the capacity to store significant amounts of water. In order to develop a conceptual model of the role of deep and regional groundwater flow in the Mt. Shasta groundwater system, the region was modeled using MODFLOW_2005, the finite difference flow model developed by USGS. The model was constrained using SRTM topography data, spring flow rates, PRISM precipitation rates, and well log levels. Geologic cross sections and gravity data were referenced in order to create a realistic estimate of the aquifer's structure down to 6km in depth. The aquifer stratigraphy was then represented by using 6 layers with 2-4 zones of hydraulic conductivity per layer to account for both vertical and lateral differences in lithology as well as decreasing permeability with depth. These hydraulic conductivity parameters of the model were varied using inverse modeling (UCODE_2014) to determine which layers and zones could support flow and still produce results consistent with existing well logs. Depth of flow was also corroborated with resistivity data collected in Shasta Valley using magnetotelluric (MT) soundings. Depths with comparatively low electrical resistivity were assumed to be aquifer units, and zones with high resistivity were assumed to be aquitards. By performing MT soundings in multiple locations and dividing the model into zones, this model tests both the maximum depth of flow as well as how that depth varies with lithology and geographical location.

Geoelectrical structure of the central zone of Piton de la Fournaise volcano (Reunion)

USGS Publications Warehouse

Lenat, J.-F.; Fitterman, D.; Jackson, D.B.; Labazuy, P.

2000-01-01

A study of the geoelectrical structure of the central part of Piton de la Fournaise volcano (Reunion, Indian Ocean) was made using direct current electrical (DC) and transient electromagnetic soundings (TEM). Piton de la Fournaise is a highly active oceanic basaltic shield and has been active for more than half a million years. Joint interpretation of the DC and TEM data allows us to obtain reliable 1D models of the resistivity distribution. The depth of investigation is of the order of 1.5 km but varies with the resistivity pattern encountered at each sounding. Two-dimensional resistivity cross sections were constructed by interpolation between the soundings of the 1D interpreted models. Conductors with resistivities less than 100 ohm-m are present at depth beneath all of the soundings and are located high in the volcanic edifice at elevations between 2000 and 1200 m. The deepest conductor has a resistivity less than 20 ohm-m for soundings located inside the Enclos and less than 60-100 ohm-m for soundings outside the Enclos. From the resistivity distributions, two zones are distinguished: (a) the central zone of the Enclos; and (b) the outer zone beyond the Enclos. Beneath the highly active summit area, the conductor rises to within a few hundred meters of the surface. This bulge coincides with a 2000-mV self-potential anomaly. Low-resistivity zones are inferred to show the presence of a hydrothermal system where alteration by steam and hot water has lowered the resistivity of the rocks. Farther from the summit, but inside the Enclos the depth to the conductive layers increases to approximately 1 km and is inferred to be a deepening of the hydrothermally altered zone. Outside of the Enclos, the nature of the deep, conductive layers is not established. The observed resistivities suggest the presence of hydrated minerals, which could be found in landslide breccias, in hydrothermally altered zones, or in thick pyroclastic layers. Such formations often create perched water tables. The known occurrence of large eastward-moving landslides in the evolution of Piton de la Fournaise strongly suggests that large volumes of breccias should exist in the interior of the volcano; however, extensive breccia deposits are not observed at the bottom of the deep valleys that incise the volcano to elevations lower than those determined for the top of the conductors. The presence of the center of Piton de la Fournaise beneath the Plaine des Sables area during earlier volcanic stages (ca. 0.5 to 0.150 Ma) may have resulted in broad hydrothermal alteration of this zone. However, this interpretation cannot account for the low resistivities in peripheral zones. It is not presently possible to discriminate between these general interpretations. In addition, the nature of the deep conductors may be different in each zone. Whatever the geologic nature of these conductive layers, their presence indicates a major change of lithology at depth, unexpected for a shield volcano such as Piton de la Fournaise.

Collective Landmarks for Deep Time: A New Tool for Evolution Education

ERIC Educational Resources Information Center

Delgado, Cesar

2014-01-01

Evolution is a fundamental, organising concept in biology, yet there is widespread resistance to evolution among US students and there are rising creationist challenges in Europe. Resistance to evolution is linked to lack of understanding of the age of the Earth. An understanding of deep time is thus essential for effective biology education.…

Design and Implementation of a Dual-Mass MEMS Gyroscope with High Shock Resistance

PubMed Central

Huang, Libin; Li, Hongsheng

2018-01-01

This paper presents the design and implementation of a dual-mass MEMS gyroscope with high shock resistance by improving the in-phase frequency of the gyroscope and by using a two-stage elastic stopper mechanism and proposes a Simulink shock model of the gyroscope equipped with the two-stage stopper mechanism, which is a very efficient method to evaluate the shock resistance of the gyroscope. The structural design takes into account both the mechanical sensitivity and the shock resistance. The design of the primary structure and the analysis of the stopper mechanism are first introduced. Based on the expression of the restoring force of the stopper beam, the analytical shock response model of the gyroscope is obtained. By this model, the shock response of the gyroscope is theoretically analyzed, and the appropriate structural parameters are obtained. Then, the correctness of the model is verified by finite element (FE) analysis, where the contact collision analysis is introduced in detail. The simulation results show that the application of the two-stage elastic stopper mechanism can effectively improve the shock resistance by more than 1900 g and 1500 g in the x- and y-directions, respectively. Finally, experimental verifications are carried out by using a machete hammer on the micro-gyroscope prototype fabricated by the deep dry silicon on glass (DDSOG) technology. The results show that the shock resistance of the prototype along the x-, y- and z-axes all exceed 10,000 g. Moreover, the output of the gyroscope can return to normal in about 2 s. PMID:29601510

Design and Implementation of a Dual-Mass MEMS Gyroscope with High Shock Resistance.

PubMed

Gao, Yang; Huang, Libin; Ding, Xukai; Li, Hongsheng

2018-03-30

This paper presents the design and implementation of a dual-mass MEMS gyroscope with high shock resistance by improving the in-phase frequency of the gyroscope and by using a two-stage elastic stopper mechanism and proposes a Simulink shock model of the gyroscope equipped with the two-stage stopper mechanism, which is a very efficient method to evaluate the shock resistance of the gyroscope. The structural design takes into account both the mechanical sensitivity and the shock resistance. The design of the primary structure and the analysis of the stopper mechanism are first introduced. Based on the expression of the restoring force of the stopper beam, the analytical shock response model of the gyroscope is obtained. By this model, the shock response of the gyroscope is theoretically analyzed, and the appropriate structural parameters are obtained. Then, the correctness of the model is verified by finite element (FE) analysis, where the contact collision analysis is introduced in detail. The simulation results show that the application of the two-stage elastic stopper mechanism can effectively improve the shock resistance by more than 1900 g and 1500 g in the x - and y -directions, respectively. Finally, experimental verifications are carried out by using a machete hammer on the micro-gyroscope prototype fabricated by the deep dry silicon on glass (DDSOG) technology. The results show that the shock resistance of the prototype along the x -, y - and z -axes all exceed 10,000 g. Moreover, the output of the gyroscope can return to normal in about 2 s.

Large area and deep sub-wavelength interference lithography employing odd surface plasmon modes.

PubMed

Liu, Liqin; Luo, Yunfei; Zhao, Zeyu; Zhang, Wei; Gao, Guohan; Zeng, Bo; Wang, Changtao; Luo, Xiangang

2016-07-28

In this paper, large area and deep sub-wavelength interference patterns are realized experimentally by using odd surface plasmon modes in the metal/insulator/metal structure. Theoretical investigation shows that the odd modes possesses much higher transversal wave vector and great inhibition of tangential electric field components, facilitating surface plasmon interference fringes with high resolution and contrast in the measure of electric field intensity. Interference resist patterns with 45 nm (∼λ/8) half-pitch, 50 nm depth, and area size up to 20 mm × 20 mm were obtained by using 20 nm Al/50 nm photo resist/50 nm Al films with greatly reduced surface roughness and 180 nm pitch exciting grating fabricated with conventional laser interference lithography. Much deeper resolution down to 19.5 nm is also feasible by decreasing the thickness of PR. Considering that no requirement of expensive EBL or FIB tools are employed, it provides a cost-effective way for large area and nano-scale fabrication.

Geophysical characterization of Range-Front Faults, Snake Valley, Nevada

USGS Publications Warehouse

Asch, Theodore H.; Sweetkind, Donald S.

2010-01-01

In September 2009, the U.S. Geological Survey, in cooperation with the National Park Service, collected audiomagnetotelluric (AMT) data along two profiles on the eastern flank of the Snake Range near Great Basin National Park to refine understanding of the subsurface geology. Line 1 was collected along Baker Creek, was approximately 6.7-km long, and recorded subsurface geologic conditions to approximately 800-m deep. Line 2, collected farther to the southeast in the vicinity of Kious Spring, was 2.8-km long, and imaged to depths of approximately 600 m. The two AMT lines are similar in their electrical response and are interpreted to show generally similar subsurface geologic conditions. The geophysical response seen on both lines may be described by three general domains of electrical response: (1) a shallow (mostly less than 100-200-m deep) domain of highly variable resistivity, (2) a deep domain characterized by generally high resistivity that gradually declines eastward to lower resistivity with a steeply dipping grain or fabric, and (3) an eastern domain in which the resistivity character changes abruptly at all depths from that in the western domain. The shallow, highly variable domain is interpreted to be the result of a heterogeneous assemblage of Miocene conglomerate and incorporated megabreccia blocks overlying a shallowly eastward-dipping southern Snake Range detachment fault. The deep domain of generally higher resistivity is interpreted as Paleozoic sedimentary rocks (Pole Canyon limestone and Prospect Mountain Quartzite) and Mesozoic and Cenozoic plutonic rocks occurring beneath the detachment surface. The range of resistivity values within this deep domain may result from fracturing adjacent to the detachment, the presence of Paleozoic rock units of variable resistivities that do not crop out in the vicinity of the lines, or both. The eastern geophysical domain is interpreted to be a section of Miocene strata at depth, overlain by Quaternary alluvial fill. These deposits lie east of a steeply east-dipping normal fault that cuts all units and has about 100 m of east-side-down offset.

Hydrogen passivation of n+p and p+n heteroepitaxial InP solar cell structures

NASA Technical Reports Server (NTRS)

Chatterjee, B.; Ringel, S. A.; Hoffman, R., Jr.

1995-01-01

High-efficiency, heteroepitaxial (HE) InP solar cells, grown on GaAs, Si or Ge substrates, are desirable for their mechanically strong, light-weight and radiation-hard properties. However, dislocations, caused by lattice mismatch, currently limit the performance of the HE cells. This occurs through shunting paths across the active photovoltaic junction and by the formation of deep levels. In previous work we have demonstrated that plasma hydrogenation is an effective and stable means to passivate the electrical activity of dislocations in specially designed HE InP test structures. In this work, we present the first report of successful hydrogen passivation in actual InP cell structures grown on GaAs substrates by metalorganic chemical vapor deposition (MOCVD). We have found that a 2 hour exposure to a 13.56 MHz hydrogen plasma at 275 C reduces the deep level concentration in HE n+n InP cell structures from as-grown values of approximately 10(exp 15)/cm(exp -3), down to 1-2 x 10(exp 13)/cm(exp -3). The deep levels in the p-type base region of the cell structure match those of our earlier p-type test structures, which were attributed to dislocations or related point defect complexes. All dopants were successfully reactivated by a 400 C, 5 minute anneal with no detectable activation of deep levels. I-V analysis indicated a subsequent approximately 10 fold decrease in reverse leakage current at -1 volt reverse bias, and no change in the forward biased series resistance of the cell structure which indicates complete reactivation of the n+ emitter. Furthermore, electrochemical C-V profiling indicates greatly enhanced passivation depth, and hence hydrogen diffusion, for heteroepitaxial structures when compared with identically processed homoepitaxial n+p InP structures. An analysis of hydrogen diffusion in dislocated InP will be discussed, along with comparisons of passivation effectiveness for n+p versus p+n heteroepitaxial cell configurations. Preliminary hydrogen-passivated HE InP cell results will also be presented.

Protection mechanisms of the iron-plated armor of a deep-sea hydrothermal vent gastropod

PubMed Central

Yao, Haimin; Dao, Ming; Imholt, Timothy; Huang, Jamie; Wheeler, Kevin; Bonilla, Alejandro; Suresh, Subra; Ortiz, Christine

2010-01-01

Biological exoskeletons, in particular those with unusually robust and multifunctional properties, hold enormous potential for the development of improved load-bearing and protective engineering materials. Here, we report new materials and mechanical design principles of the iron-plated multilayered structure of the natural armor of Crysomallon squamiferum, a recently discovered gastropod mollusc from the Kairei Indian hydrothermal vent field, which is unlike any other known natural or synthetic engineered armor. We have determined through nanoscale experiments and computational simulations of a predatory attack that the specific combination of different materials, microstructures, interfacial geometries, gradation, and layering are advantageous for penetration resistance, energy dissipation, mitigation of fracture and crack arrest, reduction of back deflections, and resistance to bending and tensile loads. The structure-property-performance relationships described are expected to be of technological interest for a variety of civilian and defense applications. PMID:20133823

Developing bioproxies of past ocean ecosystem change through compound-specific stable isotope analysis of proteinaceous deep-sea corals.

NASA Astrophysics Data System (ADS)

McMahon, K.; Williams, B.; Mccarthy, M. D.; Etnoyer, P. J.

2015-12-01

Our understanding of current and future ocean conditions is framed by our ability to reconstruct past changes in ecosystem structure and function recorded in paleoarchives. One such archive, proteinaceous deep-sea corals, act as "living sediment traps" with the potential to greatly improve our ability to reconstruct long-term, high-resolution biogeochemical records of export production. Compound-specific stable isotope analysis (CSIA) of individual amino acids (AAs) in deep-sea corals has provided highly detailed new tools to reconstruct changes in both plankton community composition and sources of nitrogen. However, to realize the full potential of CSIA in deep-sea corals, it is critical to better understand the link between the biogeochemical signatures of deep-sea coral polyp tissue and diagenetically resistant proteinaceous skeletal material. We conducted the first detailed comparison of δ13C and δ15N values for individual AAs between tissue and skeleton for three deep-sea coral genera (Primnoa, Isidella, and Kulamanamana). For δ13C values, we found minimal offsets in both essential and non-essential AAs across genera, strongly supporting coral skeleton AA fingerprinting as a new tool to reconstruct plankton community structure. Similarly, there was no significant offset in source AA δ15N values between tissue and skeleton, supporting the use of Phe δ15N as a proxy for baseline nitrogen sources. However, and rather unexpectedly, we found that the d15N values of the trophic AA group were consistently 3-4‰ lighter in skeleton than polyp tissue for all three genera. We hypothesize that this may reflect a partitioning of either N flux or pathways associated with AA transamination between polyp and skeleton tissues. This offset leads to an underestimate of trophic position using current CSIA-based calculations. Overall, our work strongly supports the applicability of CSIA in proteinaceous deep-sea corals to reconstruct past changes in biogeochemical cycling and plankton community dynamics. However, it also indicates that a new correction factor will be required to reconstruct accurate records of change in plankton trophic structure.

Insights about minority HIV-1 strains in transmitted drug resistance mutation dynamics and disease progression.

PubMed

Leda, Ana Rachel; Hunter, James; Oliveira, Ursula Castro; Azevedo, Inacio Junqueira; Sucupira, Maria Cecilia Araripe; Diaz, Ricardo Sobhie

2018-04-19

The presence of minority transmitted drug resistance mutations was assessed using ultra-deep sequencing and correlated with disease progression among recently HIV-1-infected individuals from Brazil. Samples at baseline during recent infection and 1 year after the establishment of the infection were analysed. Viral RNA and proviral DNA from 25 individuals were subjected to ultra-deep sequencing of the reverse transcriptase and protease regions of HIV-1. Viral strains carrying transmitted drug resistance mutations were detected in 9 out of the 25 patients, for all major antiretroviral classes, ranging from one to five mutations per patient. Ultra-deep sequencing detected strains with frequencies as low as 1.6% and only strains with frequencies >20% were detected by population plasma sequencing (three patients). Transmitted drug resistance strains with frequencies <14.8% did not persist upon established infection. The presence of transmitted drug resistance mutations was negatively correlated with the viral load and with CD4+ T cell count decay. Transmitted drug resistance mutations representing small percentages of the viral population do not persist during infection because they are negatively selected in the first year after HIV-1 seroconversion.

Evaluation of Strain Measurement Devices for Inflatable Structures

NASA Technical Reports Server (NTRS)

Litteken, Douglas A.

2017-01-01

Inflatable structures provide a significant volume savings for future NASA deep space missions. The complexity of these structures, however, provides difficulty for engineers in designing, analyzing, and testing. Common strain measurement systems for metallic parts cannot be used directly on fabrics. New technologies must be developed and tested to accuractly measure the strain of inflatable structures. This paper documents the testing of six candidate strain measurement devices for use on fabrics. The resistance devices tested showed significant hysteresis during creep and cyclic testing. The capacitive device, however, showed excellent results and little-to-no hysteresis. Because of this issue, only two out of the six proposed devices will continue in development. The resulting data and lessons learned from this effort provides direction for continued work to produce a structural health monitoring system for inflatable habitats.

Evaluation of Strain Measurement Devices for Inflatable Structures

NASA Technical Reports Server (NTRS)

Litteken, Doug

2017-01-01

Inflatable structures provide a significant volume savings for future NASA deep space missions. The complexity of these structures, however, provides difficulty for engineers in designing, analyzing, and testing. Common strain measurement systems for metallic parts cannot be used directly on fabrics. New technologies must be developed and tested to accurately measure the strain of inflatable structures. This paper documents the testing of six candidate strain measurement devices for use on fabrics. The resistance devices tested showed significant hysteresis during creep and cyclic testing. The capacitive device, however, showed excellent results and little-to-no hysteresis. Because of this issue, only two out of the six proposed devices will continue in development. The resulting data and lessons learned from this effort provides direction for continued work to produce a structural health monitoring system for inflatable habitats.

Characterization of irradiation induced deep and shallow impurities

NASA Astrophysics Data System (ADS)

Treberspurg, Wolfgang; Bergauer, Thomas; Dragicevic, Marko; Krammer, Manfred; Valentan, Manfred

2013-12-01

Silicon Detectors close to the interaction point of the High Luminosity Large Hardron Collider (HL-LHC) have to withstand a harsh irradiation environment. In order to evaluate the behaviour of shallow and deep defects, induced by neutron irradiation, spreading resistance resistivity measurements and capacitance voltage measurements have been performed. These measurements, deliver information about the profile of shallow impurities after irradiation as well as indications of deep defects in the Space Charge Region (SCR) and the Electrical Neutral Bulk (ENB). By considering the theoretical background of the measurement both kinds of defects can be investigated independently from each other.

The Electrical Resistivity Structure of the Eastern Anatolian Collision Zone, Northeastern Anatolia

NASA Astrophysics Data System (ADS)

Cengiz, Özlem; Tuǧrul Başokur, Ahmet; Tolak Çiftçi, Elif

2016-04-01

The Northeastern Anatolia is located at the intensely deformed Eastern Anatolian Collision Zone (EACZ), and its tectonic framework is characterized by the collision of the Arabian plate with Eurasian. Although extensive attention is given to understand the crustal and upper mantle processes at this convergent boundary, there is still an ongoing debate over the geodynamic processes of the region. In this study, we were specifically interested in the geoelectric properties and thus geodynamics of the crust beneath the EACZ. Magnetotelluric (MT) measurements were made on two profiles across the north of the EACZ in 1998 as part of a national project undertaken by the Turkish Petroleum Corporation (TPAO). MT data in the frequency range of 300-0.001 Hz were collected from 168 stations located along 78 km north to south and 47 km west to east profiles where direct convergence occurs between Arabian and Eurasian plates. Two and three-dimensional inversion algorithms were used to obtain resistivity models of the study area. According to these models, the upper crust consists of low resistivity sedimentary rocks (<30 Ωm) that are underlain by highly resistive (~500-1000 Ωm) crystalline basement rocks of the Eastern Anatolian Accretionary Complex and Pontides. While the upper and lower crustal resistivity at the northern part of the study area shows a layered structure, significant horizontal and vertical variations for the rest of the EACZ exists on resistivity models. The broad low resistivity zones (<50 Ωm) observed at mid and lower crustal levels throughout the EACZ. These fluid-rich regions along with high temperatures could indicate weak zones representing the locations of active deformation induced by continent-continent collision and correlate with volcanic centers in the region. The variation in the resistivity structure supports the southward subduction model with the resistive continental block and the deep conductive zones presumably corresponding to the oceanic crust.

Evolution of AlGaN deep level defects as a function of alloying and compositional grading and resultant impact on electrical conductivity

DOE PAGES

Armstrong, Andrew M.; Allerman, Andrew A.

2017-07-24

AlGaN:Si epilayers with uniform Al compositions of 60%, 70%, 80%, and 90% were grown by metal-organic vapor phase epitaxy along with a compositionally graded, unintentionally doped (UID) AlGaN epilayer with the Al composition varying linearly between 80% and 100%. The resistivity of AlGaN:Si with a uniform composition increased significantly for the Al content of 80% and greater, whereas the graded UID-AlGaN film exhibited resistivity equivalent to 60% and 70% AlGaN:Si owing to polarization-induced doping. Deep level defect studies of both types of AlGaN epilayers were performed to determine why the electronic properties of uniform-composition AlGaN:Si degraded with increased Al content,more » while the electronic properties of graded UID-AlGaN did not. The deep level density of uniform-composition AlGaN:Si increased monotonically and significantly with the Al mole fraction. Conversely, graded-UID AlGaN had the lowest deep level density of all the epilayers despite containing the highest Al composition. These findings indicate that Si doping is an impetus for point defect incorporation in AlGaN that becomes stronger with the increasing Al content. However, the increase in deep level density with the Al content in uniform-composition AlGaN:Si was small compared to the increase in resistivity. This implies that the primary cause for increasing resistivity in AlGaN:Si with the increasing Al mole fraction is not compensation by deep levels but rather increasing activation energy for the Si dopant. As a result, the graded UID-AlGaN films maintained low resistivity because they do not rely on thermal ionization of Si dopants.« less

Evolution of AlGaN deep level defects as a function of alloying and compositional grading and resultant impact on electrical conductivity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Armstrong, Andrew M.; Allerman, Andrew A.

AlGaN:Si epilayers with uniform Al compositions of 60%, 70%, 80%, and 90% were grown by metal-organic vapor phase epitaxy along with a compositionally graded, unintentionally doped (UID) AlGaN epilayer with the Al composition varying linearly between 80% and 100%. The resistivity of AlGaN:Si with a uniform composition increased significantly for the Al content of 80% and greater, whereas the graded UID-AlGaN film exhibited resistivity equivalent to 60% and 70% AlGaN:Si owing to polarization-induced doping. Deep level defect studies of both types of AlGaN epilayers were performed to determine why the electronic properties of uniform-composition AlGaN:Si degraded with increased Al content,more » while the electronic properties of graded UID-AlGaN did not. The deep level density of uniform-composition AlGaN:Si increased monotonically and significantly with the Al mole fraction. Conversely, graded-UID AlGaN had the lowest deep level density of all the epilayers despite containing the highest Al composition. These findings indicate that Si doping is an impetus for point defect incorporation in AlGaN that becomes stronger with the increasing Al content. However, the increase in deep level density with the Al content in uniform-composition AlGaN:Si was small compared to the increase in resistivity. This implies that the primary cause for increasing resistivity in AlGaN:Si with the increasing Al mole fraction is not compensation by deep levels but rather increasing activation energy for the Si dopant. As a result, the graded UID-AlGaN films maintained low resistivity because they do not rely on thermal ionization of Si dopants.« less

Complex structure of Piton de la Fournaise and its underlying lithosphere revealed by magnetotelluric 3D inversion

NASA Astrophysics Data System (ADS)

Gailler, Lydie-Sarah; Martí, Anna; Lénat, Jean-François

2018-05-01

La Réunion is a large volcanic construction resting on Paleocene oceanic crust. Through the 3D inversion of a large set of magnetotelluric (MT) soundings, our results reveal the general resistivity structure of the western part of Piton de la Fournaise volcano down to its base and the first 10 km or so of the underlying lithosphere. The resistivity pattern shows a general stratification of the resistivity values. An upper resistive layer corresponds to unsaturated and water-saturated lava flows. This layer is thinner (a few hundred meters) in the Enclos and Plaine des Sables/Fond de la Rivière de l'Est areas than on the NW flank where it reaches 2000 m. Below, the rest of the edifice is distinctly more conductive and shows highly conductive patches. The origin of the globally weak resistivity of the lower part of the construction is not established but can be tentatively attributed to a higher degree of alteration. The case of the highly conductive patches is different. Resistivity values of a few Ω·m imply the presence of highly conductive fluids and/or minerals that, in this context, are generally associated with hydrothermal phenomena. In the Enclos, highly conductive patches are unambiguously attributed to the presently active hydrothermal system. Beneath the Plaine des Sables/Fond de la Rivière de l'Est, they may be associated with hydrothermal alteration developed by the ancient volcanic center. The larger highly conductive patches are found below sea level and above the crust beneath the NW flank, at depths significantly larger than the others. This area coincides with the path of the N120 rift zone, with a deep ( 10-20 km) seismicity and with diffuse CO2 degassing. A relationship may therefore be inferred between deep magmatic activity, eruptive activity and postulated highly conductive hydrothermal zone. In the globally weak resistivity of the lower part of the edifice, a dome of moderate resistivity (>1 kΩ·m) is centered beneath the Plaine des Sables. It is wider than a dense intrusive complex inferred from gravity models in the same area. The present resolution of both MT and gravity models cannot exclude a same nature for both structures. Beneath 4 km b.s.l., an increase of the resistivity values underlines an interface in good agreement with the inferred location of the transition between the edifice and the oceanic crust at this depth. The upper lithosphere shows resistivity values above 250 Ω·m. This study therefore demonstrates the capability of the method to image major shallow structures such as the hydrothermally altered zones, and deeper ones such as the heterogeneity of the crust. Fig. A.1. a) Location of the resistivity soundings used in this study at the scale of Piton de la Fournaise. b) Zoom on each set of soundings from various organizations. The study area is framed in red. Fig. B.1. Comparison between the raw data and model responses (xx, xy, yx, yy) at all sites and periods. Circles: measured data; dots: model responses. Black and blue: xx, xy; red and pink: yx and yy.

Enhanced wall-plug efficiency in AlGaN-based deep-ultraviolet light-emitting diodes with uniform current spreading p-electrode structures

NASA Astrophysics Data System (ADS)

Hao, Guo-Dong; Taniguchi, Manabu; Tamari, Naoki; Inoue, Shin-ichiro

2016-06-01

The current crowding is an especially severe issue in AlGaN-based deep-ultraviolet (DUV) light-emitting diodes (LEDs) because of the low conductivity of the n-AlGaN cladding layer that has a high Al fraction. We theoretically investigated the improvement in internal quantum efficiency and total resistances in DUV-LEDs with an emission wavelength of 265 nm by a well-designed p-electrode geometry to produce uniform current spreading. As a result, the wall-plug efficiency was enhanced by a factor of 60% at an injection current of 350 mA in the designed uniform-current-spreading p-electrode LED when compared with an LED with a conventional cross-bar p-electrode pattern.

Electro-thermo-mechanical coupling analysis of deep drawing with resistance heating for aluminum matrix composites sheet

NASA Astrophysics Data System (ADS)

Zhang, Kaifeng; Zhang, Tuoda; Wang, Bo

2013-05-01

Recently, electro-plastic forming to be a focus of attention in materials hot processing research area, because it is a sort of energy-saving, high efficient and green manufacturing technology. An electro-thermo-mechanical model can be adopted to carry out the sequence simulation of aluminum matrix composites sheet deep drawing via electro-thermal coupling and thermal-mechanical coupling method. The first step of process is resistance heating of sheet, then turn off the power, and the second step is deep drawing. Temperature distribution of SiCp/2024Al composite sheet by resistance heating and sheet deep drawing deformation were analyzed. During the simulation, effect of contact resistances, temperature coefficient of resistance for electrode material and SiCp/2024Al composite on temperature distribution were integrally considered. The simulation results demonstrate that Sicp/2024Al composite sheet can be rapidly heated to 400° in 30s using resistances heating and the sheet temperature can be controlled by adjusting the current density. Physical properties of the electrode materials can significantly affect the composite sheet temperature distribution. The temperature difference between the center and the side of the sheet is proportional to the thermal conductivity of the electrode, the principal cause of which is that the heat transfers from the sheet to the electrode. SiCp/2024Al thin-wall part can be intactly manufactured at strain rate of 0.08s-1 and the sheet thickness thinning rate is limited within 20%, which corresponds well to the experimental result.

Nano-imprint lithography using poly (methyl methacrylate) (PMMA) and polystyrene (PS) polymers

NASA Astrophysics Data System (ADS)

Ting, Yung-Chiang; Shy, Shyi-Long

2016-04-01

Nano-imprinting lithography (NIL) technology, as one of the most promising fabrication technologies, has been demonstrated to be a powerful tool for large-area replication up to wafer-level, with features down to nanometer scale. The cost of resists used for NIL is important for wafer-level large-area replication. This study aims to develop capabilities in patterning larger area structure using thermal NIL. The commercial available Poly (Methyl Methacrylate) (PMMA) and Polystyrene (PS) polymers possess a variety of characteristics desirable for NIL, such as low material cost, low bulkvolumetric shrinkage, high spin coating thickness uniformity, high process stability, and acceptable dry-etch resistance. PMMA materials have been utilized for positive electron beam lithography for many years, offering high resolution capability and wide process latitude. In addition, it is preferable to have a negative resist like PMMA, which is a simple polymer with low cost and practically unlimited shelf life, and can be dissolved easily using commercial available Propylene glycol methyl ether acetate (PGMEA) safer solvent to give the preferred film thickness. PS is such a resist, as it undergoes crosslinking when exposed to deep UV light or an electron beam and can be used for NIL. The result is a cost effective patterning larger area structure using thermal nano-imprint lithography (NIL) by using commercial available PMMA and PS ploymers as NIL resists.

Manual on the Fatigue of Structures. II. Causes and Prevention of Damage. 7. Mechanical Surface Damage,

DTIC Science & Technology

1981-06-01

observed in the fatigue tests on bearings278. Tichler and Scott27’ had noted a correlation between cavitation erosion and rolling contact fatigue resistance...in the case of ball bearing steels. In the cavitation tests the pits appear before the deep craters. Tichler et al.280 investigated chromium steels...during the first period and the true tensile strength o^ . In a subsequent paper when studying 6 chromium steels and 6 Cu-Ni alloys. Tichler et al.281

Sahara Desert, Niger

NASA Image and Video Library

1996-01-20

STS072-709-063 (11-20 Jan. 1996) --- The astronauts aboard the Space Shuttle Endeavour exposed this 70mm frame of the Air Mountains, located in the country of Niger. These Sahara Desert structures are granitic intrusions. They are resistant to erosion and are very prominent in the lighter colored sands of the area. According to NASA geologists studying the photo collection, the ring-like structure on the lower left-hand edge of the photograph is probably a Quaternary volcanic feature. The highest peaks in the range approach 1,800 meters (6,000 feet). Deep valleys in the range are used by the Tuaregs for pasturage. Uranium and other minerals are being mined in the massif.

Crystal structure of the avilamycin resistance-conferring methyltransferase AviRa from Streptomyces viridochromogenes.

PubMed

Mosbacher, Tanja G; Bechthold, Andreas; Schulz, Georg E

2003-05-23

The emergence of antibiotic-resistant bacterial strains is a widespread problem in contemporary medical practice and drug design. It is therefore important to elucidate the underlying mechanism in each case. The methyltransferase AviRa from Streptomyces viridochromogenes mediates resistance to the antibiotic avilamycin, which is closely related to evernimicin, an oligosaccharide antibiotic that has been used in medical studies. The structure of AviRa was determined by X-ray diffraction at 1.5A resolution. Phases were obtained from one selenomethionine residue introduced by site-directed mutagenesis. The chain-fold is similar to that of most methyltransferases, although AviRa contains two additional helices as a specific feature. A putative-binding site for the cofactor S-adenosyl-L-methionine was derived from homologous structures. It agrees with the conserved pattern of interacting amino acid residues. AviRa methylates a specific guanine base within the peptidyltransferase loop of the 23S ribosomal RNA. Guided by the target, the enzyme was docked to the cognate ribosomal surface, where it fit well into a deep cleft without contacting any ribosomal protein. The two additional alpha-helices of AviRa filled a depression in the surface. Since the transferred methyl group of the cofactor is in a pocket beneath the enzyme surface, the targeted guanine base has to flip out for methylation.

Upper mantle diapers, lower crustal magmatic underplating, and lithospheric dismemberment of the Great Basin and Colorado Plateau regions, Nevada and Utah; implications from deep MT resistivity surveying

NASA Astrophysics Data System (ADS)

Wannamaker, P. E.; Doerner, W. M.; Hasterok, D. P.

2005-12-01

In the rifted Basin and Range province of the southwestern U.S., a common faulting model for extensional basins based e.g. on reflection seismology data shows dominant displacement along master faults roughly coincident with the main topographic scarp. On the other hand, complementary data such as drilling, earthquake focal mechanisms, volcanic occurrences, and trace indicators such as helium isotopes suggest that there are alternative geometries of crustal scale faulting and material transport from the deep crust and upper mantle in this province. Recent magnetotelluric (MT) profiling results reveal families of structures commonly dominated by high-angle conductors interpreted to reflect crustal scale fault zones. Based mainly on cross cutting relationships, these faults appear to be late Cenozoic in age and are of low resistivity due to fluids or alteration (including possible graphitization). In the Ruby Mtns area of north-central Nevada, high angle faults along the margins of the core complex connect from near surface to a regional lower crustal conductor interpreted to contain high-temperature fluids and perhaps melts. Such faults may exemplify the high angle normal faults upon which the major earthquakes of the Great Basin appear to nucleate. A larger-scale transect centered on Dixie Valley shows major conductive crustal-scale structures connecting to conductive lower crust below Dixie Valley, the Black Rock desert in NW Nevada, and in east-central Nevada in the Monitor-Diamond Valley area. In the Great Basin-Colorado Plateau transition of Utah, the main structures revealed are a series of nested low-angle detachment structures underlying the incipient development of several rift grabens. All these major fault zones appear to overlie regions of particularly conductive lower crust interpreted to be caused by recent basaltic underplating. In the GB-CP transition, long period data show two, low-resistivity upper mantle diapirs underlying the concentrated conductive lower crust and nested faults, and these are advanced as melt source regions for the underplating. MT, with its wide frequency bandwidth, allows views of nearly a complete melting and emplacement process, from mantle source region, through lower crustal intrusion, to brittle regime deformational response.

Modeling Postconvective Submesoscale Coherent Vortices in the Northwestern Mediterranean Sea

NASA Astrophysics Data System (ADS)

Damien, P.; Bosse, A.; Testor, P.; Marsaleix, P.; Estournel, C.

2017-12-01

For the first time, the formation of submesoscale coherent vortices (SCVs) during intermediate and deep convection events is documented in a realistic high-resolution (1 km) numerical simulation of the oceanic circulation in the northwestern Mediterranean Sea. Winter intermediate and deep convection leads to the formation of anticyclonic and cyclonic eddies with lifetimes exceeding 1 year. By focusing on three typical eddies, the main characteristics of such vortices are discussed. The anticyclonic eddies are typical of SCVs observed in deep convection areas so far. They are characterized by a small radius (˜6.5 km) and orbital peak velocities of about 7 cm/s located at great depth (˜1500 m) or intermediate depth (˜500 m). The cyclonic vortices show very similar characteristics, such as a high Rossby number (˜0.4), but with surface-intensified structures. The long lifetimes of both anticyclonic and cyclonic eddies reflect very slow diffusive processes between their core and their surroundings and a strong resistance to external perturbations. These long-lived eddies are found to participate in the spreading of a significant portion (from 15 to 35%) of the convected waters in the Gulf of Lions and contribute to the ventilation of the deep basin.

Evolution of simeprevir-resistant variants over time by ultra-deep sequencing in HCV genotype 1b.

PubMed

Akuta, Norio; Suzuki, Fumitaka; Sezaki, Hitomi; Suzuki, Yoshiyuki; Hosaka, Tetsuya; Kobayashi, Masahiro; Kobayashi, Mariko; Saitoh, Satoshi; Ikeda, Kenji; Kumada, Hiromitsu

2014-08-01

Using ultra-deep sequencing technology, the present study was designed to investigate the evolution of simeprevir-resistant variants (amino acid substitutions of aa80, aa155, aa156, and aa168 positions in HCV NS3 region) over time. In Toranomon Hospital, 18 Japanese patients infected with HCV genotype 1b, received triple therapy of simeprevir/PEG-IFN/ribavirin (DRAGON or CONCERT study). Sustained virological response rate was 67%, and that was significantly higher in patients with IL28B rs8099917 TT than in those with non-TT. Six patients, who did not achieve sustained virological response, were tested for resistant variants by ultra-deep sequencing, at the baseline, at the time of re-elevation of viral loads, and at 96 weeks after the completion of treatment. Twelve of 18 resistant variants, detected at re-elevation of viral load, were de novo resistant variants. Ten of 12 de novo resistant variants become undetectable over time, and that five of seven resistant variants, detected at baseline, persisted over time. In one patient, variants of Q80R at baseline (0.3%) increased at 96-week after the cessation of treatment (10.2%), and de novo resistant variants of D168E (0.3%) also increased at 96-week after the cessation of treatment (9.7%). In conclusion, the present study indicates that the emergence of simeprevir-resistant variants after the start of treatment could not be predicted at baseline, and the majority of de novo resistant variants become undetectable over time. Further large-scale prospective studies should be performed to investigate the clinical utility in detecting simeprevir-resistant variants. © 2014 Wiley Periodicals, Inc.

Segmentation of plate coupling, fate of subduction fluids, and modes of arc magmatism in Cascadia, inferred from magnetotelluric resistivity

USGS Publications Warehouse

Wannamaker, Philip E.; Evans, Rob L.; Bedrosian, Paul A.; Unsworth, Martyn J.; Maris, Virginie; McGary, R. Shane

2014-01-01

Five magnetotelluric (MT) profiles have been acquired across the Cascadia subduction system and transformed using 2-D and 3-D nonlinear inversion to yield electrical resistivity cross sections to depths of ∼200 km. Distinct changes in plate coupling, subduction fluid evolution, and modes of arc magmatism along the length of Cascadia are clearly expressed in the resistivity structure. Relatively high resistivities under the coasts of northern and southern Cascadia correlate with elevated degrees of inferred plate locking, and suggest fluid- and sediment-deficient conditions. In contrast, the north-central Oregon coastal structure is quite conductive from the plate interface to shallow depths offshore, correlating with poor plate locking and the possible presence of subducted sediments. Low-resistivity fluidized zones develop at slab depths of 35–40 km starting ∼100 km west of the arc on all profiles, and are interpreted to represent prograde metamorphic fluid release from the subducting slab. The fluids rise to forearc Moho levels, and sometimes shallower, as the arc is approached. The zones begin close to clusters of low-frequency earthquakes, suggesting fluid controls on the transition to steady sliding. Under the northern and southern Cascadia arc segments, low upper mantle resistivities are consistent with flux melting above the slab plus possible deep convective backarc upwelling toward the arc. In central Cascadia, extensional deformation is interpreted to segregate upper mantle melts leading to underplating and low resistivities at Moho to lower crustal levels below the arc and nearby backarc. The low- to high-temperature mantle wedge transition lies slightly trenchward of the arc.

Effect of Friction-Induced Deformation on the Structure, Microhardness, and Wear Resistance of Austenitic Chromium—Nickel Stainless Steel Subjected to Subsequent Oxidation

NASA Astrophysics Data System (ADS)

Korshunov, L. G.; Chernenko, N. L.

2016-03-01

The effect of plastic deformation that occurs in the zone of the sliding friction contact on structural transformations in the 12Kh18N9T austenitic steel subjected to subsequent 1-h oxidation in air at temperatures of 300-800°C, as well as on its wear resistance, has been studied. It has been shown that severe deformation induced by dry sliding friction produces the two-phase nanocrystalline γ + α structure in the surface layer of the steel ~10 μm thick. This structure has the microhardness of 5.2 GPa. Subsequent oxidation of steel at temperatures of 300-500°C leads to an additional increase in the microhardness of its deformed surface layer to the value of 7.0 GPa. This is due to the active saturation of the austenite and the strain-assisted martensite (α') with the oxygen atoms, which diffuse deep into the metal over the boundaries of the γ and α' nanocrystals with an increased rate. The concentration of oxygen in the surface layer of the steel and in wear products reaches 8 wt %. The atoms of the dissolved oxygen efficiently pin dislocations in the γ and α' phases, which enhances the strength and wear resistance of the surface of the 12Kh18N9T steel. The oxidation of steel at temperatures of 550-800°C under a light normal load (98 N) results in the formation of a large number of Fe3O4 (magnetite) nanoparticles, which increase the resistance of the steel to thermal softening and its wear resistance during dry sliding friction in a pair with 40Kh13 steel. Under a heavy normal load (196 N), the toughness of 12Kh18N9T steel and, therefore, the wear resistance of its surface layer decrease due to the presence of the brittle oxide phase.

Silylated Acid Hardened Resist [SAHR] Technology: Positive, Dry Developable Deep UV Resists

NASA Astrophysics Data System (ADS)

Thackeray, James W.; Bohland, John F.; Pavelchek, , Edward K.; Orsula, George W.; McCullough, Andrew W.; Jones, Susan K.; Bobbio, Stephen M.

1990-01-01

This paper describes continuing efforts in the development of Acid Hardened Resist (AHR) systems for use in deep UV photolithography. The Silylated AHR (SAHR) process treats a highly absorbing resist, such as XP-8928, with trimethylsilyldiethylamine. The exposed, crosslinked areas show virtually no reactivity with the silylating agent, and the unexposed areas incorporate 10 to 12% by weight silicon in the film. The silicon appears to incorporate from the exterior in a constant concentration, consistent with Case II diffusion. Subsequent dry etching leads to a positive tone image. The contrast is 5, and the photospeed is ~10 mJ/cm2. Resolution of 0.5 μm line/space pairs has been demonstrated, although substantial proximity effects are encountered.

Carrier Transport and Effective Barrier Height of Low Resistance Metal Contact to Highly Mg-Doped p-GaN

NASA Astrophysics Data System (ADS)

Park, Youngjun; Kim, Hyunsoo

2011-08-01

The effective barrier height and carrier transport mechanism of low resistance Ag-based contact to highly Mg-doped p-GaN were investigated. The specific contact resistance obtained was as low as 7.0×10-4 Ω cm2. The electrical resistivity of p-GaN was found to increase depending on ˜T-1/4, indicating variable-range hopping (VRH) conduction through Mg-related deep-level defects. Based on the VRH conduction model, the effective barrier height for carrier transport could be measured as 0.12 eV, which is low enough to explain the formation of excellent ohmic contact. The deep-level defects were also found to induce surface Fermi pinning.

Low absorption loss p-AlGaN superlattice cladding layer for current-injection deep ultraviolet laser diodes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Martens, M.; Kuhn, C.; Ziffer, E.

2016-04-11

Current injection into AlGaN-based laser diode structures with high aluminum mole fractions for deep ultraviolet emission is investigated. The electrical characteristics of laser diode structures with different p-AlGaN short period superlattice (SPSL) cladding layers with various aluminum mole fractions are compared. The heterostructures contain all elements that are needed for a current-injection laser diode including cladding and waveguide layers as well as an AlGaN quantum well active region emitting near 270 nm. We found that with increasing aluminum content in the p-AlGaN cladding, the diode turn-on voltage increases, while the series resistance slightly decreases. By introducing an SPSL instead of bulkmore » layers, the operating voltage is significantly reduced. A gain guided broad area laser diode structure with transparent p-Al{sub 0.70}Ga{sub 0.30}N waveguide layers and a transparent p-cladding with an average aluminum content of 81% was designed for strong confinement of the transverse optical mode and low optical losses. Using an optimized SPSL, this diode could sustain current densities of more than 4.5 kA/cm{sup 2}.« less

Fluid circulation and structural system of Cerritos Colorados geothermal field in La Primavera volcanic caldera (Mexico) inferred from geophysical surveys

NASA Astrophysics Data System (ADS)

Bolós, X.; Cifuentes-Nava, G.; Macias, J. L.; Sosa-Ceballos, G.; García-Tenorio, F.; Albor, M., III; Juarez, M.; Gamez, V.

2017-12-01

Hydrothermal activity in volcanic calderas is the consequence of energy transfer between deep magmatic chambers and subsurface layers saturated in water. This hydrothermal system is generated by convection of the groundwater supplied by meteoric water recharged and the ascent of hot volcanic gasses exsolved from deep magma reservoirs. Calderas are heterogeneous geological structures that due to their formation and evolution produced a complex stratigraphy. All of these heterogeneities can be affected by deformation and also by the presence of fractures and faults which constitute the main pathways whereby hydrothermal fluids can move easily through the surface as spring discharges and fumarolic activity. Geophysical methods have been used in the last decades to investigate the relationship between structural geology and hydrothermal systems in different volcanic areas around the world. In this work, we have focused on the role of subsurface structures to understand and localize the pathways of fluids related to the hydrothermal system of the Cerritos Colorados geothermal field. We focused in the central area of the caldera (P12 well and Cerritos Colorados graben), where active hydrothermal activity is evidenced by fumaroles, thermal anomalies, CO2 diffuse emission, and sulfur precipitation. We have applied a self-potential method (SP) that combined with temperature measurements that allowed to identify the main infiltration and ascending fluid zones in the area, and their specific surface temperature coinciding with fumarolic activity. From this data we an applied Electrical Resistivity Tomography (ERT) survey in two selected places. One ERT profile (1.2 km in length) was located in the P12 well area. A 3D resistivity model used with the equatorial method was carried out on the Cerritos Colorados graben area. Combining the results of the SP, TºC, and ERT data with a detailed structural map we identified the main degassing zones (i.e. fumaroles) that correspond to higher permeability zones located along normal and strike-slip faults. In conclusion, a strong structural control of the surface manifestation of these hydrothermal systems is deduced from our new data. Then, our results emphasize the importance of old structural boundaries that are controlled by intra-caldera tectonic structures.

Deep electrical investigations in the Long Valley geothermal area, California

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stanley, W.D.; Jackson, D.B.; Zohdy, A.A.R.

1976-02-10

Direct current resistivity and time domain electromagnetic techniques were used to study the electrical structure of the Long Valley geothermal area. A resistivity map was compiled from 375 total field resistivity measurements. Two significant zones of low resistivity were detected, one near Casa Diablo Hot Springs and one surrounding the Cashbaugh Ranch-Whitmore Hot Springs area. These anomalies and other parts of the caldera were investigated in detail with 49 Schlumberger dc soundings and 13 transient electromagnetic soundings. An extensive conductive zone of 1- to 10-..cap omega..m resistivity was found to be the cause of the total field resistivity lows. Drillmore » hole information indicates that the shallow parts of the conductive zone in the eastern part of the caldera contain water of only 73/sup 0/C and consist of highly zeolitized tuffs and ashes in the places that were tested. A deeper zone near Whitmore Hot Springs is somewhat more promising in potential for hot water, but owing to the extensive alteration prevalent in the caldera the presence of hot water cannot be definitely assumed. The resistivity results indicate that most of the past hydrothermal activity, and probably most of the present activity, is controlled by fracture systems related to regional Sierran faulting.« less

Empirical investigation into depth-resolution of Magnetotelluric data

NASA Astrophysics Data System (ADS)

Piana Agostinetti, N.; Ogaya, X.

2017-12-01

We investigate the depth-resolution of MT data comparing reconstructed 1D resistivity profiles with measured resistivity and lithostratigraphy from borehole data. Inversion of MT data has been widely used to reconstruct the 1D fine-layered resistivity structure beneath an isolated Magnetotelluric (MT) station. Uncorrelated noise is generally assumed to be associated to MT data. However, wrong assumptions on error statistics have been proved to strongly bias the results obtained in geophysical inversions. In particular the number of resolved layers at depth strongly depends on error statistics. In this study, we applied a trans-dimensional McMC algorithm for reconstructing the 1D resistivity profile near-by the location of a 1500 m-deep borehole, using MT data. We resolve the MT inverse problem imposing different models for the error statistics associated to the MT data. Following a Hierachical Bayes' approach, we also inverted for the hyper-parameters associated to each error statistics model. Preliminary results indicate that assuming un-correlated noise leads to a number of resolved layers larger than expected from the retrieved lithostratigraphy. Moreover, comparing the inversion of synthetic resistivity data obtained from the "true" resistivity stratification measured along the borehole shows that a consistent number of resistivity layers can be obtained using a Gaussian model for the error statistics, with substantial correlation length.

Plasmid incidence in bacteria from deep subsurface sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fredrickson, J.K.; Hicks, R.J.; Li, S.W.

Bacteria were isolated from deep terrestrial subsurface sediments underlying the coastal plain of South Carolina. A total of 163 isolates from deep sediments, surface soil, and return drill muds were examined for plasmid DNA content and resistance to the antibiotics penicillin, ampicillin, carbenicillin, streptomycin, kanamycin, and tetracycline. MICs of Cu{sup 2+}, Cr{sup 3+}, and Hg{sup 2+} for each isolate were also determined. The overall frequency of plasmid occurrence in the subsurface bacteria was 33%. Resistance was most frequent to penicillin (70% of all isolates), ampicillin (49%), and carbenicillin (32%) and was concluded to be related to the concentrations of themore » individual antibiotics in the disks used for assaying resistance and to the production of low levels of {beta}-lactamase. The frequencies of resistance to penicillin and ampicillin were significantly greater for isolates bearing plasmids than for plasmidless isolates; however, resistance was not transferable to penicillin-sensitive Escherichia coli. Hybridization of subsurface bacterial plasmids and chromosomal DNA with a whole-TOL-plasmid (pWWO) probe revealed some homology of subsurface bacterial plasmid and chromosomal DNAs, indicating a potential for those bacterial to harbor catabolic genes on plasmids or chromosomes. The incidences of antibiotic resistance and MICs of metals for subsurface bacteria were significantly different from those drill mud bacteria, ruling out the possibility that bacteria from sediments were derived from drill muds.« less

Investigation of suspected gulls in the Jurassic limestone strata of the Cotswold Hills, Gloucestershire, England using electrical resistivity tomography

NASA Astrophysics Data System (ADS)

Barron, A. J. M.; Uhlemann, S.; Pook, G. G.; Oxby, L.

2016-09-01

An electrical resistivity tomography survey has clearly indicated the presence of substantial vertical zones of contrasting material beneath a set of conspicuous linear surface hollows that cut across a spur forming part of the Cotswold Hills escarpment in Gloucestershire. These zones are compared with nearby quarry exposures and are inferred to be gulls - graben-like structures at least 80 m deep filled with collapsed blocks of bedrock with intervening air-filled spaces, lying within areas of relatively undisrupted gently dipping strata, and which under some circumstances would present a significant geohazard. Our results confirm the great potential of this non-invasive and rapid survey technique for investigating such phenomena, and provide an exemplar for comparison with surveys elsewhere, to assist identification of similar features.

Characterizing the Inner Accretionary Prism of the Nankai Trough with 3D Seismic and Logging While Drilling at IODP Site C0002

NASA Astrophysics Data System (ADS)

Boston, B.; Moore, G. F.; Jurado, M. J.; Sone, H.; Tobin, H. J.; Saffer, D. M.; Hirose, T.; Toczko, S.; Maeda, L.

2014-12-01

The deeper, inner parts of active accretionary prisms have been poorly studied due the lack of drilling data, low seismic image quality and typically thick overlying sediments. Our project focuses on the interior of the Nankai Trough inner accretionary prism using deep scientific drilling and a 3D seismic cube. International Ocean Discovery Program (IODP) Expedition 348 extended the existing riser hole to more than 3000 meters below seafloor (mbsf) at Site C0002. Logging while drilling (LWD) data included gamma ray, resistivity, resistivity image, and sonic logs. LWD analysis of the lower section revealed on the borehole images intense deformation characterized by steep bedding, faults and fractures. Bedding plane orientations were measured throughout, with minor gaps at heavily deformed zones disrupting the quality of the resistivity images. Bedding trends are predominantly steeply dipping (60-90°) to the NW. Interpretation of fractures and faults in the image log revealed the existence of different sets of fractures and faults and variable fracture density, remarkably high at fault zones. Gamma ray, resistivity and sonic logs indicated generally homogenous lithology interpretation along this section, consistent with the "silty-claystone" predominant lithologies described on cutting samples. Drops in sonic velocity were observed at the fault zones defined on borehole images. Seismic reflection interpretation of the deep faults in the inner prism is exceedingly difficult due to a strong seafloor multiple, high-angle bedding dips, and low frequency of the data. Structural reconstructions were employed to test whether folding of seismic horizons in the overlying forearc basin could be from an interpreted paleothrust within the inner prism. We used a trishear-based restoration to estimate fault slip on folded horizons landward of C0002. We estimate ~500 m of slip from a steeply dipping deep thrust within the last ~0.9 Ma. Folding is not found in the Kumano sediments near C0002, where normal faults and tilting dominate the modern basin deformation. Both logging and seismic are consistent in characterizing a heavily deformed inner prism. Most of this deformation must have occurred during or before formation of the overlying modern Kumano forearc basin sediments.

A Library of Rad Hard Mixed-Voltage/Mixed-Signal Building Blocks for Integration of Avionics Systems for Deep Space

NASA Technical Reports Server (NTRS)

Mojarradi, M. M.; Blaes, B.; Kolawa, E. A.; Blalock, B. J.; Li, H. W.; Buck, K.; Houge, D.

2001-01-01

To build the sensor intensive system-on-a-chip for the next generation spacecrafts for deep space, Center for Integration of Space Microsystems at JPL (CISM) takes advantage of the lower power rating and inherent radiation resistance of Silicon on Insulator technology (SOI). We are developing a suite of mixed-voltage and mixed-signal building blocks in Honeywell's SOI process that can enable the rapid integration of the next generation avionics systems with lower power rating, higher reliability, longer life, and enhanced radiation tolerance for spacecrafts such as the Europa Orbiter and Europa Lander. The mixed-voltage building blocks are predominantly for design of adaptive power management systems. Their design centers around an LDMOS structure that is being developed by Honeywell, Boeing Corp, and the University of Idaho. The mixed-signal building blocks are designed to meet the low power, extreme radiation requirement of deep space applications. These building blocks are predominantly used to interface analog sensors to the digital CPU of the next generation avionics system on a chip. Additional information is contained in the original extended abstract.

Evaluation of static resistance of deep foundation [project summary].

DOT National Transportation Integrated Search

2017-06-01

Various types of deep foundations were investigated including steel H-piles, pre-stressed concrete piles, open cylindrical steel and concrete piles with diameters greater than 36 inches, and drilled shafts with partial length permanent casing. : The ...

Electromagnetic studies in the Fennoscandian Shield—electrical conductivity of Precambrian crust

NASA Astrophysics Data System (ADS)

Korja, T.; Hjelt, S.-E.

1993-12-01

Electromagnetic (EM) investigations of the 1980s in the Fennoscandian (Baltic) Shield produced an unique and unified EM data set. Studies include regional investigations by the magnetovariational (MV) method with large lateral sampling distance, investigations of anomalous conductivity structures by magnetotelluric (MT) soundings and other (EM) and electrical methods (audio MT soundings, d.c. dipole-dipole and VLF resistivity profilings) with shorter sampling distance, and studies of the near-surface conductivity by airborne EM surveys. The variety of methods provide an ability to map efficiently crustal conductivity structures from a regional scale of hundreds of kilometres down to local details of some metres in the anomalous structures. The Precambrian of the Fennoscandian Shield is characterized by roughly NW-SE-directed elongated belts of conductors which separate more resistive crustal blocks. The latter serve as transparent windows through which to probe deep electrical structure and belts of conductors as tectonic markers of ancient orogenic zones including (1) the Kittilä-Vetrenny Poyas conductor, (2) the Lapland Granulite Belt and Inari-Pechenga-Imandra-Varzuga conductors, (3) the Archaean-Proterozoic boundary conductor and (4) the Southern Finland Conductor. The conductive belts—orogenic conductors—indicate places where crustal masses collided and were finally sealed together. Enhanced conductivity in the orogenic conductors is caused primarily by an electronic conducting mechanism in graphite- and sulphide-bearing metasedimentary rocks. Estimations of the lower-crustal conductivity indicate a laterally heterogeneous lower crust in the Fennoscandian Shield. Archaean lower crust seems to be in general more resistive than the Early Proterozoic lower crust of the Karelian and Svecofennian Domains. The lower crust in the southwestern part of the Svecofennian Domain and in the Sveconorwegian Domain seems to be more resistive than in the central part of the Svecofennian Domain.

New Electrical Resistivity Tomography approach for karst cave characterization: Castello di Lepre karst cave (Marsico Nuovo, Southern Italy).

NASA Astrophysics Data System (ADS)

Guerriero, Merilisa; Capozzoli, Luigi; De Martino, Gregory; Perciante, Felice; Gueguen, Erwan; Rizzo, Enzo

2017-04-01

Geophysical methods are commonly applied to characterize karst cave. Several geophysical method are used such as electrical resistivity tomography (ERT), gravimetric prospecting (G), ground penetrating radar (GPR) and seismic methods (S), in order to provide information on cave geometry and subsurface geological structure. In detail, in some complex karst systems, each geophysical method can only give partial information if used in normal way due to a low resolution for deep target. In order to reduce uncertainty and avoid misinterpretations based on a normal use of the electrical resistivity tomography method, a new ERT approach has been applied in karst cave Castello di Lepre (Marsico Nuovo, Basilicata region, Italy) located in the Mezo-Cenozoic carbonate substratum of the Monti della Maddalena ridge (Southern Appenines). In detail, a cross-ERT acquisition system was applied in order to improve the resolution on the electrical resistivity distribution on the surrounding geological structure of a karst cave. The cross-ERT system provides a more uniform model resolution vertically, increasing the resolution of the surface resistivity imaging. The usual cross-ERT is made by electrode setting in two or more borehole in order to acquire the resistivity data distribution. In this work the cross-ERT was made between the electrodes located on surface and along a karst cave, in order to obtain an high resolution of the electrical resistivity distributed between the cave and the surface topography. Finally, the acquired cross-ERT is potentially well-suited for imaging fracture zones since electrical current flow in fractured rock is primarily electrolytic via the secondary porosity associated with the fractures.

The effects of deep-level defects on the electrical properties of Cd0.9Zn0.1Te crystals

NASA Astrophysics Data System (ADS)

Wang, Pengfei; Nan, Ruihua; Jian, Zengyun

2017-06-01

The deep-level defects of CdZnTe (CZT) crystals grown by the modified vertical Bridgman (MVB) method act as trapping centers or recombination centers in the band gap, which have significant effects on its electrical properties. The resistivity and electron mobility-lifetime product of high resistivity Cd0.9Zn0.1Te wafer marked CZT1 and low resistivity Cd0.9Zn0.1Te wafer marked CZT2 were tested respectively. Their deep-level defects were identified by thermally stimulated current (TSC) spectroscopy and thermoelectric effect spectroscopy (TEES) respectively. Then the trap-related parameters were characterized by the simultaneous multiple peak analysis (SIMPA) method. The deep donor level ({E}{{DD}}) dominating dark current was calculated by the relationship between dark current and temperature. The Fermi-level was characterized by current-voltage measurements of temperature dependence. The width of the band gap was characterized by ultraviolet-visible-infrared transmittance spectroscopy. The results show the traps concentration and capture cross section of CZT1 are lower than CZT2, so its electron mobility-lifetime product is greater than CZT2. The Fermi-level of CZT1 is closer to the middle gap than CZT2. The degree of Fermi-level pinned by {E}{{DD}} of CZT1 is larger than CZT2. It can be concluded that the resistivity of CZT crystals increases as the degree of Fermi-level pinned near the middle gap by the deep donor level enlarges. Project supported by the National Natural Science Foundation of China (No. 51502234) and the Scientific Research Plan Projects of Shaanxi Provincial Department of Education of China (No. 15JS040).

Thermal ink-jet device using single-chip silicon microchannels

NASA Astrophysics Data System (ADS)

Wuu, DongSing; Cheng, Chen-Yue; Horng, RayHua; Chan, G. C.; Chiu, Sao-Ling; Wu, Yi-Yung

1998-06-01

We present a new method to fabricate silicon microfluidic channels by through-hole etching with subsequent planarization. The method is based on etching out the deep grooves through a perforated silicon carbide membrane, followed by sealing the membrane with plasma-enhanced chemical vapor deposition (PECVD). Low-pressure-chemical-vapor- deposited (LPCVD) polysilicon was used as a sacrificial layer to define the channel structure and only one etching step is required. This permits the realization of planarization after a very deep etching step in silicon and offers the possibility for film deposition, resist spinning and film patterning across deep grooves. The process technology was demonstrated on the fabrication of a monolithic silicon microchannel structure for thermal inkjet printing. The Ta-Al heater arrays are integrated on the top of each microchannel, which connect to a common on-chip front-end ink reservoir. The fabrication of this device requires six masks and no active nozzle-to-chip alignment. Moreover, the present micromachining process is compatible with the addition of on-chip circuitry for multiplexing the heater control signals. Heat transfer efficiency to the ink is enhanced by the high thermal conductivity of the silicon carbide in the channel ceiling, while the bulk silicon maintains high interchannel isolation. The fabricated inkjet devices show the droplet sizes of 20 - 50 micrometer in diameter with various channel dimensions and stable ejection of ink droplets more than 1 million.

Resolving the deep electrical resistivity structure at Central Pontides, Northern Turkey by three-dimensional magnetotelluric modeling

NASA Astrophysics Data System (ADS)

Özaydın, Sinan; Bülent Tank, Sabri; Karaş, Mustafa; Sandvol, Eric

2017-04-01

Wide-band magnetotelluric (MT) (360 Hz - 1860 sec) data were acquired at 25 sites along a north - south aligned profile cutting across the Central Pontides, which are made up of highly metamorphosed formations and their tectonic boundaries including: a Lower Cretaceous-aged turbidite sequence, Central Pontides Metamorphic Supercomplex (CPMS), North Anatolian Fault Zone (NAFZ) and Izmir-Ankara-Erzincan Suture Zone (IAESZ). Dimensionality analyses over all observation points demonstrated high electrical anisotropy, which indicates complex geological and tectonic structures. This dimensional complexity and presence of the electrically conductive Black Sea augmented the requirement for a three-dimensional analysis. Inverse modeling routines, ModEM (Egbert and Kelbert, 2012) and WSINV3DMT (Siripunvaraporn et al., 2005) were utilized to reveal the geo-electrical implications over this unusually complicated region. Interpretations of the resultant models are summarized as follows: (i) Çangaldaǧ and Domuzdaǧ complexes appear as highly resistive bodies bounded by north dipping faults. (ii) Highly conductive Tosya Basin sediments overlain the ophiolitic materials as a thin cover located at the south of the NAFZ. (iii) North Anatolian Fault and some auxiliary faults within the system exhibit conductive-resistive interfaces that reach to lower crustal levels. (iv) IAESZ is a clear feature marked by the resistivity contrast between NAFZ-related sedimentary basins and Neo-Tethyan ophiolites.

Genetic Pathway of HIV-1 Resistance to Novel Fusion Inhibitors Targeting the Gp41 Pocket

PubMed Central

Su, Yang; Chong, Huihiui; Xiong, Shengwen; Qiao, Yuanyuan; Qiu, Zonglin

2015-01-01

ABSTRACT The peptide drug enfuvirtide (T20) is the only HIV-1 fusion inhibitor in clinical use, but it easily induces drug resistance, calling for new strategies for developing effective drugs. On the basis of the M-T hook structure, we recently developed highly potent short-peptide HIV-1 fusion inhibitors (MTSC22 and HP23), which mainly target the conserved gp41 pocket and possess high genetic barriers to resistance. Here, we focused on the selection and characterization of HIV-1 escape mutants of MTSC22, which revealed new resistance pathways and mechanisms. Two mutations (E49K and L57R) located at the inhibitor-binding site and two mutations (N126K and E136G) located at the C-terminal heptad repeat region of gp41 were identified as conferring high resistance either singly or in combination. While E49K reduced the C-terminal binding of inhibitors via an electrostatic repulsion, L57R dramatically disrupted the N-terminal binding of M-T hook structure and pocket-binding domain. Unlike E49K and N126K, which enhanced the stability of the endogenous viral six-helical bundle core (6-HB), L57R and E136G conversely destabilized the 6-HB structure. We also demonstrated that both primary and secondary mutations caused the structural changes in 6-HB and severely impaired the capability for HIV-1 entry. Collectively, our data provide novel insights into the mechanisms of short-peptide fusion inhibitors targeting the gp41 pocket site and help increase our understanding of the structure and function of gp41 and HIV-1 evolution. IMPORTANCE The deep pocket on the N-trimer of HIV-1 gp41 has been considered an ideal drug target because of its high degree of conservation and essential role in viral entry. Short-peptide fusion inhibitors, which contain an M-T hook structure and mainly target the pocket site, show extremely high binding and inhibitory activities as well as high genetic barriers to resistance. In this study, the HIV-1 mutants resistant to MTSC22 were selected and characterized, which revealed that the E49K and L57R substitutions at the inhibitor-binding site and the N126K and E136G substitutions at the C-terminal heptad repeat region of gp41 critically determine the resistance phenotype. The data provide novel insights into the mechanisms of action of the M-T hook structure-based fusion inhibitors which will help further our understanding of the structure-function relationship of gp41 and molecular pathways of HIV-1 evolution and eventually facilitate the development of new anti-HIV drugs. PMID:26446597

Deep Sequencing of Pyrethroid-Resistant Bed Bugs Reveals Multiple Mechanisms of Resistance within a Single Population

PubMed Central

Adelman, Zach N.; Kilcullen, Kathleen A.; Koganemaru, Reina; Anderson, Michelle A. E.; Anderson, Troy D.; Miller, Dini M.

2011-01-01

A frightening resurgence of bed bug infestations has occurred over the last 10 years in the U.S. and current chemical methods have been inadequate for controlling this pest due to widespread insecticide resistance. Little is known about the mechanisms of resistance present in U.S. bed bug populations, making it extremely difficult to develop intelligent strategies for their control. We have identified bed bugs collected in Richmond, VA which exhibit both kdr-type (L925I) and metabolic resistance to pyrethroid insecticides. Using LD50 bioassays, we determined that resistance ratios for Richmond strain bed bugs were ∼5200-fold to the insecticide deltamethrin. To identify metabolic genes potentially involved in the detoxification of pyrethroids, we performed deep-sequencing of the adult bed bug transcriptome, obtaining more than 2.5 million reads on the 454 titanium platform. Following assembly, analysis of newly identified gene transcripts in both Harlan (susceptible) and Richmond (resistant) bed bugs revealed several candidate cytochrome P450 and carboxylesterase genes which were significantly over-expressed in the resistant strain, consistent with the idea of increased metabolic resistance. These data will accelerate efforts to understand the biochemical basis for insecticide resistance in bed bugs, and provide molecular markers to assist in the surveillance of metabolic resistance. PMID:22039447

Impact of the silicon substrate resistivity and growth condition on the deep levels in Ni-Au/AlN/Si MIS Capacitors

NASA Astrophysics Data System (ADS)

Wang, Chong; Simoen, Eddy; Zhao, Ming; Li, Wei

2017-10-01

Deep levels formed under different growth conditions of a 200 nm AlN buffer layer on B-doped Czochralski Si(111) substrates with different resistivity were investigated by deep-level transient spectroscopy (DLTS) on metal-insulator-semiconductor capacitors. Growth-temperature-dependent Al diffusion in the Si substrate was derived from the free carrier density obtained by capacitance-voltage measurement on samples grown on p- substrates. The DLTS spectra revealed a high concentration of point and extended defects in the p- and p+ silicon substrates, respectively. This indicated a difference in the electrically active defects in the silicon substrate close to the AlN/Si interface, depending on the B doping concentration.

Three-dimensional Magnetotelluric Characterization of the Xinzhou Geothermal Field, Southeastern China

NASA Astrophysics Data System (ADS)

Han, Q.; Hu, X.; Cai, J.; Wei, W.

2016-12-01

Xinzhou geothermal field is located in the Guangdong province and adjacent to the China South Sea, and its hot springs can reach up to 92 degree Celsius. Yanshanian granite expose widely in the south of this geothermal field and four faults cut across each other over it. A dense grid of 176 magnetotelluric (MT) sites with broadband has been acquired over the Xinzhou geothermal field and its surrounding area. Due to the related electromagnetic (EM) noise one permanent observatory was placed as a remote reference to suppress this cultural EM noise interference. The datasets are processed using the mutual reference technique, static shift correction, and structural strike and dimensionality analysis based on tensor decomposition. Data analysis reveals that the underground conductivity structure has obvious three-dimensional characterization. For the high resolution result ,two and three dimensional inversion are both applied in this area employing the non-linear conjugate gradient method (NLCG).These MT data sets are supposed to detect the deep subsurface resistivity structure correlated to the distribution of geothermal reservoir (such as faults and fractured granite) and investigate the channel of the upwelling magma. The whole and cold granite usually present high resistivity but once it functions as reservoir the resistivity will decrease, sometimes it is hard to separate the reservoir from the cap layer. The 3D inversion results delineate three high resistivity anomalies distributed in different locations. At last we put forward that the large areas of granite form the major thermal source for the study area and discuss whether any melt under these magma intrusions exists.

Thermoelectricity Generation and Electron-Magnon Scattering in a Natural Chalcopyrite Mineral from a Deep-Sea Hydrothermal Vent.

PubMed

Ang, Ran; Khan, Atta Ullah; Tsujii, Naohito; Takai, Ken; Nakamura, Ryuhei; Mori, Takao

2015-10-26

Current high-performance thermoelectric materials require elaborate doping and synthesis procedures, particularly in regard to the artificial structure, and the underlying thermoelectric mechanisms are still poorly understood. Here, we report that a natural chalcopyrite mineral, Cu1+x Fe1-x S2 , obtained from a deep-sea hydrothermal vent can directly generate thermoelectricity. The resistivity displayed an excellent semiconducting character, and a large thermoelectric power and high power factor were found in the low x region. Notably, electron-magnon scattering and a large effective mass was detected in this region, thus suggesting that the strong coupling of doped carriers and antiferromagnetic spins resulted in the natural enhancement of thermoelectric properties during mineralization reactions. The present findings demonstrate the feasibility of thermoelectric energy generation and electron/hole carrier modulation with natural materials that are abundant in the Earth's crust. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing

PubMed Central

Manske, Magnus; Miotto, Olivo; Campino, Susana; Auburn, Sarah; Almagro-Garcia, Jacob; Maslen, Gareth; O’Brien, Jack; Djimde, Abdoulaye; Doumbo, Ogobara; Zongo, Issaka; Ouedraogo, Jean-Bosco; Michon, Pascal; Mueller, Ivo; Siba, Peter; Nzila, Alexis; Borrmann, Steffen; Kiara, Steven M.; Marsh, Kevin; Jiang, Hongying; Su, Xin-Zhuan; Amaratunga, Chanaki; Fairhurst, Rick; Socheat, Duong; Nosten, Francois; Imwong, Mallika; White, Nicholas J.; Sanders, Mandy; Anastasi, Elisa; Alcock, Dan; Drury, Eleanor; Oyola, Samuel; Quail, Michael A.; Turner, Daniel J.; Rubio, Valentin Ruano; Jyothi, Dushyanth; Amenga-Etego, Lucas; Hubbart, Christina; Jeffreys, Anna; Rowlands, Kate; Sutherland, Colin; Roper, Cally; Mangano, Valentina; Modiano, David; Tan, John C.; Ferdig, Michael T.; Amambua-Ngwa, Alfred; Conway, David J.; Takala-Harrison, Shannon; Plowe, Christopher V.; Rayner, Julian C.; Rockett, Kirk A.; Clark, Taane G.; Newbold, Chris I.; Berriman, Matthew; MacInnis, Bronwyn; Kwiatkowski, Dominic P.

2013-01-01

Malaria elimination strategies require surveillance of the parasite population for genetic changes that demand a public health response, such as new forms of drug resistance. 1,2 Here we describe methods for large-scale analysis of genetic variation in Plasmodium falciparum by deep sequencing of parasite DNA obtained from the blood of patients with malaria, either directly or after short term culture. Analysis of 86,158 exonic SNPs that passed genotyping quality control in 227 samples from Africa, Asia and Oceania provides genome-wide estimates of allele frequency distribution, population structure and linkage disequilibrium. By comparing the genetic diversity of individual infections with that of the local parasite population, we derive a metric of within-host diversity that is related to the level of inbreeding in the population. An open-access web application has been established for exploration of regional differences in allele frequency and of highly differentiated loci in the P. falciparum genome. PMID:22722859

Influence of Carbon interstitials to Ti1-xMexN (Me = Zr, Al, Cr) coatings by pulsed laser ablation on wear resistance

NASA Astrophysics Data System (ADS)

Jeon, Seol; Hong, Eunpyo; Kwon, Se-Hun; Lee, Heesoo

2018-06-01

The wear resistance of Ti1-xMexN (Me = Zr, Al, Cr) coatings by the laser carburization process was investigated in terms of local atomic structural changes. The repeated pulsed laser ablation was performed to the Ti1-xMexN coating surfaces after Graphite paste was covered. The friction coefficients of the coating specimens were decreased from ∼0.7 to 0.2, and the formation of cracks and debris was suppressed by implementing the laser ablation process. ToF-SIMS depth profiles showed that the laser carburization helps Carbon penetrate into the coating layer as deep as ∼20 nm below its surface. XPS and XAFS analyses revealed that the improvement of the wear resistance of the coatings was achieved not by formation of TiC or ZrC lattices on the coatings surfaces but by Carbon interstitials to the Ti1-xMexN lattices.

A comparison of helicopter-borne electromagnetic systems for hydrogeologic studies

USGS Publications Warehouse

Bedrosian, Paul A.; Schamper, Cyril; Auken, Esben

2016-01-01

The increased application of airborne electromagnetic surveys to hydrogeological studies is driving a demand for data that can consistently be inverted for accurate subsurface resistivity structure from the near surface to depths of several hundred metres. We present an evaluation of three commercial airborne electromagnetic systems over two test blocks in western Nebraska, USA. The selected test blocks are representative of shallow and deep alluvial aquifer systems with low groundwater salinity and an electrically conductive base of aquifer. The aquifer units show significant lithologic heterogeneity and include both modern and ancient river systems. We compared the various data sets to one another and inverted resistivity models to borehole lithology and to ground geophysical models. We find distinct differences among the airborne electromagnetic systems as regards the spatial resolution of models, the depth of investigation, and the ability to recover near-surface resistivity variations. We further identify systematic biases in some data sets, which we attribute to incomplete or inexact calibration or compensation procedures.

Mechanisms of Drug Resistance: Daptomycin Resistance

PubMed Central

Tran, Truc T.; Munita, Jose M.; Arias, Cesar A.

2016-01-01

Daptomycin (DAP) is a cyclic lipopeptide with in vitro activity against a variety of Gram-positive pathogens, including multidrug-resistant organisms. Since its introduction in clinical practice in 2003, DAP has become an important key front-line antibiotic for severe or deep-seated infections caused by Gram-positive organisms. Unfortunately, DAP-resistance (R) has been extensively documented in clinically important organisms such as Staphylococcus aureus, Enterococcus spp, and Streptococcus spp. Studies on the mechanisms of DAP-R in Bacillus subtilis and other Gram-positive bacteria indicate that the genetic pathways of DAP resistance are diverse and complex. However, a common phenomenon emerging from these mechanistic studies is that DAP-R is associated with important adaptive changes in cell wall and cell membrane homeostasis with critical changes in cell physiology. Findings related to these adaptive changes have offered novel insights into the genetics and molecular mechanisms of bacterial cell envelope stress response and the manner in which Gram-positive bacteria cope with the antimicrobial peptide attack and protect vital structures of the cell envelope such as the cell membrane. In this review, we will examine the most recent findings related to the molecular mechanisms of resistance to DAP in relevant Gram-positive pathogens and discuss the clinical implications for therapy against these important bacteria. PMID:26495887

Airborne and Ground Electrical Surveys for Subsurface Mapping of the Arbuckle Aquifer, Central Oklahoma

NASA Astrophysics Data System (ADS)

Smith, D.; Smith, B. D.; Blome, C. D.; Osborn, N.

2008-12-01

Airborne and ground electrical surveys have been conducted to map the subsurface hydrogeologic character of the Arbuckle-Simpson aquifer in south central Oklahoma. An understanding of the geologic framework and hydrogeologic characteristics is necessary to evaluate groundwater flow through the highly faulted, structurally complex, carbonate aquifer. Results from this research will further understanding of the aquifer and will assist in managing the water resources of the region. The major issues include water quality, the allocation of water rights, and the potential impacts of pumping on springs and stream. Four areas in the Hunton anticline area, with distinctly different geology, were flown with a frequency domain helicopter electromagnetic system (HEM) in March, 2007. Ground electrical studies include dc resistivity imaging and natural field audiomagnetotelluric (AMT), and magnetotelluric (MT) surveys. The HEM resistivity and total field magnetic survey was flown in four blocks, A through D, mostly with a line spacing of 400 m. Block A extends from the Chickasaw National Recreational Area (CHIC) to Mill Creek on the west side of the anticline. The surface geology of this block is mostly dolomitic limestone of the Arbuckle Group that is in fault contact with younger Paleozoic clastic rocks. The flight line spacing was 800 meters in the western half of the block and 400 meters in the eastern part. Airborne magnetic data indicate that the Sulphur fault bends south to merge with the Mill Creek fault which substantiates an earlier hypothesis first made from interpretation of gravity data. Block B, located on the north side of the anticline consists of mostly of Arbuckle and Simpson Group rocks. Block C, covering most of the Clarita horst on the east side of the anticline, consists of the Upper Ordovician to the Lower Pennsylvanian shales. Block D, which was flown to include a deep test well site at Spears ranch, consisted of eight lines spaced at 400 meters. The HEM data are being used to more precisely locate faults, refine the lithostratigraphic units, and to map the depth and extent of shallow epikarst. The MT and AMT data revealed deep structural contacts and a transition between fresh and highly mineralized ground water between springs in the CHIC. The dc resistivity survey has greatly helped in mapping major faults both within dolomitic limestone and clastic units. Ground resistivity surveys also suggest that, in places, the faults within limestone are zones of lower resistivity and map low resistivity surficial epikarst a several meters thick. Ground penetrometer data also has been used to define the depth extent of epikarst in selected areas and the data correlate well with the dc resistivity and HEM resistivity depth sections.

Rapid estimation of aquifer salinity structure from oil and gas geophysical logs

NASA Astrophysics Data System (ADS)

Shimabukuro, D.; Stephens, M.; Ducart, A.; Skinner, S. M.

2016-12-01

We describe a workflow for creating aquifer salinity maps using Archie's equation for areas that have geophysical data from oil and gas wells. We apply this method in California, where geophysical logs are available in raster format from the Division of Oil, Gas, and Geothermal Resource (DOGGR) online archive. This method should be applicable to any region where geophysical logs are readily available. Much of the work is controlled by computer code, allowing salinity estimates for new areas to be rapidly generated. For a region of interest, the DOGGR online database is scraped for wells that were logged with multi-tool suites, such as the Platform Express or Triple Combination Logging Tools. Then, well construction metadata, such as measured depth, spud date, and well orientation, is attached. The resultant local database allows a weighted criteria selection of wells that are most likely to have the shallow resistivity, deep resistivity, and density porosity measurements necessary to calculate salinity over the longest depth interval. The algorithm can be adjusted for geophysical log availability for older well fields and density of sampling. Once priority wells are identified, a student researcher team uses Neuralog software to digitize the raster geophysical logs. Total dissolved solid (TDS) concentration is then calculated in clean, wet sand intervals using the resistivity-porosity method, a modified form of Archie's equation. These sand intervals are automatically selected using a combination of spontaneous potential and the difference in shallow resistivity and deep resistivity measurements. Gamma ray logs are not used because arkosic sands common in California make it difficult to distinguish sand and shale. Computer calculation allows easy adjustment of Archie's parameters. The result is a semi-continuous TDS profile for the wells of interest. These profiles are combined and contoured using standard 3-d visualization software to yield preliminary salinity maps for the region of interest. We present results for select well fields in the Southern San Joaquin Valley, California.

Protein Secondary Structure Prediction Using Deep Convolutional Neural Fields.

PubMed

Wang, Sheng; Peng, Jian; Ma, Jianzhu; Xu, Jinbo

2016-01-11

Protein secondary structure (SS) prediction is important for studying protein structure and function. When only the sequence (profile) information is used as input feature, currently the best predictors can obtain ~80% Q3 accuracy, which has not been improved in the past decade. Here we present DeepCNF (Deep Convolutional Neural Fields) for protein SS prediction. DeepCNF is a Deep Learning extension of Conditional Neural Fields (CNF), which is an integration of Conditional Random Fields (CRF) and shallow neural networks. DeepCNF can model not only complex sequence-structure relationship by a deep hierarchical architecture, but also interdependency between adjacent SS labels, so it is much more powerful than CNF. Experimental results show that DeepCNF can obtain ~84% Q3 accuracy, ~85% SOV score, and ~72% Q8 accuracy, respectively, on the CASP and CAMEO test proteins, greatly outperforming currently popular predictors. As a general framework, DeepCNF can be used to predict other protein structure properties such as contact number, disorder regions, and solvent accessibility.

Protein Secondary Structure Prediction Using Deep Convolutional Neural Fields

NASA Astrophysics Data System (ADS)

Wang, Sheng; Peng, Jian; Ma, Jianzhu; Xu, Jinbo

2016-01-01

Protein secondary structure (SS) prediction is important for studying protein structure and function. When only the sequence (profile) information is used as input feature, currently the best predictors can obtain ~80% Q3 accuracy, which has not been improved in the past decade. Here we present DeepCNF (Deep Convolutional Neural Fields) for protein SS prediction. DeepCNF is a Deep Learning extension of Conditional Neural Fields (CNF), which is an integration of Conditional Random Fields (CRF) and shallow neural networks. DeepCNF can model not only complex sequence-structure relationship by a deep hierarchical architecture, but also interdependency between adjacent SS labels, so it is much more powerful than CNF. Experimental results show that DeepCNF can obtain ~84% Q3 accuracy, ~85% SOV score, and ~72% Q8 accuracy, respectively, on the CASP and CAMEO test proteins, greatly outperforming currently popular predictors. As a general framework, DeepCNF can be used to predict other protein structure properties such as contact number, disorder regions, and solvent accessibility.

Finite Element Stress Analysis of Spent Nuclear Fuel Disposal Canister in a Deep Geological Repository

NASA Astrophysics Data System (ADS)

Kwon, Young Joo; Choi, Jong Won

This paper presents the finite element stress analysis of a spent nuclear fuel disposal canister to provide basic information for dimensioning the canister and configuration of canister components and consequently to suggest the structural analysis methodology for the disposal canister in a deep geological repository which is nowadays very important in the environmental waste treatment technology. Because of big differences in the pressurized water reactor (PWR) and the Canadian deuterium and uranium reactor (CANDU) fuel properties, two types of canisters are conceived. For manufacturing, operational reasons and standardization, however, both canisters have the same outer diameter and length. The construction type of canisters introduced here is a solid structure with a cast insert and a corrosion resistant overpack. The structural stress analysis is carried out using a finite element analysis code, NISA, and focused on the structural strength of the canister against the expected external pressures due to the swelling of the bentonite buffer and the hydrostatic head. The canister must withstand these large pressure loads. Consequently, canisters presented here contain 4 PWR fuel assemblies and 33×9 CANDU fuel bundles. The outside diameter of the canister for both fuels is 122cm and the cast insert diameter is 112cm. The total length of the canister is 483cm with the lid/bottom and the outer shell of 5cm.

Wide Bandgap Transparent Conducting Electrode of FTO/Ag/FTO Structure for Ultraviolet Light-Emitting Diodes.

PubMed

Yohn, Gyu-Jae; Jeong, Soae; Kang, Soo-Hyun; Kim, Si-Won; Noh, Beom-Rae; Oh, Semi; Jeong, Bong-Yong; Kim, Kyoung-Kook

2018-09-01

We investigated the effect of the Ag interlayer thickness on the structural, electrical and optical properties of FTO/Ag/FTO structures designed for use in wide bandgap transparent conducting electrodes. The top and bottom FTO layers were deposited on α-Al2O3 (0001) substrates via RF magnetron sputtering at 300 °C and Ag interlayers were deposited using an e-beam evaporator system. We optimized the figure of merit by changing the thickness of the inserted Ag interlayer from 10 nm to 14 nm, achieving a maximum value of 2.46 × 10-3 Ω-1 and a resistivity of 6.4 × 10-4 Ω · cm using an FTO (70 nm)/Ag (14 nm)/FTO (40 nm) structure. Furthermore, the average optical transmittance in the deep UV range (300 to 330 nm) was 82.8%.

Specific Detection of Naturally Occurring Hepatitis C Virus Mutants with Resistance to Telaprevir and Boceprevir (Protease Inhibitors) among Treatment-Naïve Infected Individuals

PubMed Central

Fonseca-Coronado, Salvador; Escobar-Gutiérrez, Alejandro; Ruiz-Tovar, Karina; Cruz-Rivera, Mayra Yolanda; Rivera-Osorio, Pilar; Vazquez-Pichardo, Mauricio; Carpio-Pedroza, Juan Carlos; Ruíz-Pacheco, Juan Alberto; Cazares, Fernando

2012-01-01

The use of telaprevir and boceprevir, both protease inhibitors (PI), as part of the specifically targeted antiviral therapy for hepatitis C (STAT-C) has significantly improved sustained virologic response (SVR) rates. However, different clinical studies have also identified several mutations associated with viral resistance to both PIs. In the absence of selective pressure, drug-resistant hepatitis C virus (HCV) mutants are generally present at low frequency, making mutation detection challenging. Here, we describe a mismatch amplification mutation assay (MAMA) PCR method for the specific detection of naturally occurring drug-resistant HCV mutants. MAMA PCR successfully identified the corresponding HCV variants, while conventional methods such as direct sequencing, endpoint limiting dilution (EPLD), and bacterial cloning were not sensitive enough to detect circulating drug-resistant mutants in clinical specimens. Ultradeep pyrosequencing was used to confirm the presence of the corresponding HCV mutants. In treatment-naïve patients, the frequency of all resistant variants was below 1%. Deep amplicon sequencing allowed a detailed analysis of the structure of the viral population among these patients, showing that the evolution of the NS3 is limited to a rather small sequence space. Monitoring of HCV drug resistance before and during treatment is likely to provide important information for management of patients undergoing anti-HCV therapy. PMID:22116161

Effects of Deep Cryogenic Treatment on the Wear Resistance and Mechanical Properties of AISI H13 Hot-Work Tool Steel

NASA Astrophysics Data System (ADS)

Çiçek, Adem; Kara, Fuat; Kıvak, Turgay; Ekici, Ergün; Uygur, İlyas

2015-11-01

In this study, a number of wear and tensile tests were performed to elucidate the effects of deep cryogenic treatment on the wear behavior and mechanical properties (hardness and tensile strength) of AISI H13 tool steel. In accordance with this purpose, three different heat treatments (conventional heat treatment (CHT), deep cryogenic treatment (DCT), and deep cryogenic treatment and tempering (DCTT)) were applied to tool steel samples. DCT and DCTT samples were held in nitrogen gas at -145 °C for 24 h. Wear tests were conducted on a dry pin-on-disk device using two loads of 60 and 80 N, two sliding velocities of 0.8 and 1 m/s, and a wear distance of 1000 m. All test results showed that DCT improved the adhesive wear resistance and mechanical properties of AISI H13 steel. The formation of small-sized and uniformly distributed carbide particles and the transformation of retained austenite to martensite played an important role in the improvements in the wear resistance and mechanical properties. After cleavage fracture, the surfaces of all samples were characterized by the cracking of primary carbides, while the DCT and DCTT samples displayed microvoid formation by decohesion of the fine carbides precipitated during the cryo-tempering process.

Deep Ore-controlling Role Beneath the Collision-related Deposit Zone in South Tibetan Plateau, Preliminary Results Revealed by Magnetotelluric Data

NASA Astrophysics Data System (ADS)

Xie, C.; Jin, S.; Wei, W.; Ye, G.; Fang, Y.; Zhang, L.; Dong, H.; Yin, Y.

2017-12-01

The Tibetan plateau is the largest and most recent plateau orogenic belt in the world, and the south part is expected as the ongoing India-Eurasia continental collision zone. The collision-related deposit zones which are distributed in south plateau could be roughly divided into three parts: the porphyry deposit in the Gangdese magmatic belt, the chromite deposit along the Yarlung-Zangbo suture (YZS) and the prospective deposit along the gneiss domes in the Tethys Himalayan. The deep ore-controlling role of those deposit zones is still remain controversial. Previous magnetotelluric (MT) data deployed from Himalayan to Gangdese terrane were inverted using a three dimensional (3D) MT inversion algorithm ModEM. The results show that the resistivity cover layers above -10 km are distributed along the whole profiles, whereas small and sporadic conductors could be also imaged. The middle to lower crust beneath -25 km is imaged as large scale but discontinuous conductive zones which have a central resistivity less than 10 ohm·m. We suggest the middle to lower crustal conductors could be interpreted as partial melting. This hypothesis is supported by some previous geological and geochemical studies. The Metallogenesis and partial melting play an important role in promoting each other. For the metallogenesis, the high water content is one of the prominent factors, and could be released on breakdown of amphibole in eclogite and garnet amphibolite during melting. On the other hand, the increasing of the water content would probably advance partial melting. The results indicate that the deep process and magmatism beneath different deposit zones are probably varying. We studied the rheological characteristics from the perspective of subsurface electrical structures. We hope by comparative analysis, the process of `origins - migration -formation' for the system of deep `magma - rheology - deposition' would be better understood.

Geology and geophysics of the southern Raft River Valley geothermal area, Idaho, USA

USGS Publications Warehouse

Williams, Paul L.; Mabey, Don R.; Zohdy, Adel A.R.; Ackermann, Hans D.; Hoover, Donald B.; Pierce, Kenneth L.; Oriel, Steven S.

1976-01-01

The Raft River valley, near the boundary of the Snake River plain with the Basin and Range province, is a north-trending late Cenozoic downwarp bounded by faults on the west, south, and east. Pleistocene alluvium and Miocene-Pliocene tuffaceous sediments, conglomerate, and felsic volcanic rocks aggregate 2 km in thickness. Large gravity, magnetic, and total field resistivity highs probably indicate a buried igneous mass that is too old to serve as a heat source. Differing seismic velocities relate to known or inferred structures and to a suspected shallow zone of warm water. Resistivity anomalies reflect differences of both composition and degree of alteration of Cenozoic rocks. Resistivity soundings show a 2 to 5 ohm·m unit with a thickness of 1 km beneath a large part of the valley, and the unit may indicate partly hot water and partly clayey sediments. Observed self-potential anomalies are believed to indicate zones where warm water rises toward the surface. Boiling wells at Bridge, Idaho are near the intersection of north-northeast normal faults which have moved as recently as the late (?) Pleistocene, and an east-northeast structure, probably a right-lateral fault. Deep circulation of ground water in this region of relatively high heat flow and upwelling along faults is the probable cause of the thermal anomaly.

Using RNA-seq and targeted nucleases to identify mechanisms of drug resistance in acute myeloid leukemia.

PubMed

Rathe, Susan K; Moriarity, Branden S; Stoltenberg, Christopher B; Kurata, Morito; Aumann, Natalie K; Rahrmann, Eric P; Bailey, Natashay J; Melrose, Ellen G; Beckmann, Dominic A; Liska, Chase R; Largaespada, David A

2014-08-13

The evolution from microarrays to transcriptome deep-sequencing (RNA-seq) and from RNA interference to gene knockouts using Clustered Regularly Interspaced Short Palindromic Repeats (CRISPRs) and Transcription Activator-Like Effector Nucleases (TALENs) has provided a new experimental partnership for identifying and quantifying the effects of gene changes on drug resistance. Here we describe the results from deep-sequencing of RNA derived from two cytarabine (Ara-C) resistance acute myeloid leukemia (AML) cell lines, and present CRISPR and TALEN based methods for accomplishing complete gene knockout (KO) in AML cells. We found protein modifying loss-of-function mutations in Dck in both Ara-C resistant cell lines. CRISPR and TALEN-based KO of Dck dramatically increased the IC₅₀ of Ara-C and introduction of a DCK overexpression vector into Dck KO clones resulted in a significant increase in Ara-C sensitivity. This effort demonstrates the power of using transcriptome analysis and CRISPR/TALEN-based KOs to identify and verify genes associated with drug resistance.

Using experimental evolution to identify druggable targets that could inhibit the evolution of antimicrobial resistance

PubMed Central

Mehta, Heer H.; Prater, Amy G.; Shamoo, Yousif

2017-01-01

With multi-drug and pan-drug resistant bacteria becoming increasingly common in hospitals, antibiotic resistance has threatened to return us to a pre-antibiotic era that would completely undermine modern medicine. There is an urgent need to develop new antibiotics and strategies to combat resistance that are substantially different from earlier drug discovery efforts. One such strategy that would complement current and future antibiotics would be a class of co-drugs that target the evolution of resistance and thereby extend the efficacy of specific classes of antibiotics. A critical step in the development of such strategies lies in understanding the critical evolutionary trajectories responsible for resistance and which proteins or biochemical pathways within those trajectories would be good candidates for co-drug discovery. We identify the most important steps in the evolution of resistance for a specific pathogen and antibiotic combination by evolving highly polymorphic populations of pathogens to resistance in a novel bioreactor that favors biofilm development. As the populations evolve to increasing drug concentrations, we use deep sequencing to elucidate the network of genetic changes responsible for resistance and subsequent in vitro biochemistry and often structure determination to determine how the adaptive mutations produce resistance. Importantly, the identification of the molecular steps, their frequency within the populations and their chronology within the evolutionary trajectory toward resistance is critical to assessing their relative importance. In this work, we discuss findings from the evolution of the ESKAPE pathogen, Pseudomonas aeruginosa to the drug of last resort, colistin to illustrate the power of this approach. PMID:28928474

An integrated deep electrical resistivity model of the Larderello geothermal field (Italy)

NASA Astrophysics Data System (ADS)

Rizzo, Enzo; Capozzoli, Luigi; De martino, Gregory; Godio, Alberto; Manzella, Adele; Perciante, Felice; Santilano, Alessandro

2017-04-01

A new deep electrical resistivity acquisition was carried out in Larderello geothermal area (Tuscania Region, Italy) by 3D Deep Electrical Resistivity Tomography (3D-DERT) and Magnetotelluric (M) acquisition. The investigated area is located close the Venelle2 well in the southern part of Larderello site, where there is the oldest field in the world under exploitation for power production (actual installed capacity is about 795 MWe). A vapour-dominated system is exploited to depth over 3500 m, with temperatures exceeding 350°C, from two different reservoirs. The Larderello area has been investigated by many geological and geophysical data of previous exploration projects but nowadays several critical issues on deep features of the field are still matter of debate, e.g., permeability distribution in the hydrothermal reservoir and the presence of fluids at supercritical condition at depth. The 3D-DERT system was designed by Surface-Surface and Surface-Hole electrode distributions in the area around Venelle2 well covering an area around 16km2. The well (kindly provided by Enel GP) was accessible down to 1.6 km with a temperature up to 250°C and a metallic casing down to 1 km. The in-hole thermal cable is characterized by n.12 flexible metallic electrodes with an electrodes space of 50m covering the open-hole portion (1050m-1600m). The surface electrodes are located around the Venelle2 hole on n.23 different positions connected to automatic dataloger to acquire the drop of potential and to transmitter device to inject the current (5-10A). The crucial task was the data processing, considering the large distance between the Tx and Rx systems that strongly reduces the signal to-noise ratio. To overcome this drawback, for each quadripole position the corresponding voltage signal was filtered, stored and processed with advanced statistical packages. The new 22 station were installed in the studied area and the data were carried out taking in account a permanent remote station in the Capraia Island. A Zonge International Inc multi-channel 32-bit receivers able to record broadband time-series from 0.0001 to 1 kHz, was used. For each site, we recorded at least 17 hours using the sampling rate of 256 Hz and one hour with a sampling rate of 4096 and 1024 Hz. The integration of MT model and experimental DC resistivity measurements improved the knowledge on the deep structures of the Larderello field. The interpretation took advantage also of a detailed and integrated 3D modelling of many geological and geophysical data available in the area. This study is part of the EU FP7-funded Integrated Methods for Advanced Geothermal Exploration (IMAGE) Project under grant agreement n° 608553. We thank the colleagues that supported the fieldwork during the MT and DC surveys. We thank Enel Green Power for the precious technical and logistical support on carrying out the borehole experiment.

Study of a chemically amplified resist for X-ray lithography by Fourier transform infrared spectroscopy.

PubMed

Tan, T L; Wong, D; Lee, P; Rawat, R S; Patran, A

2004-11-01

Future applications of microelectromechanical systems (MEMS) require lithographic performance of very high aspect ratio. Chemically amplified resists (CARs) such as the negative tone commercial SU-8 provide critical advantages in sensitivity, resolution, and process efficiency in deep ultraviolet, electron-beam, and X-ray lithographies (XRLs), which result in a very high aspect ratio. In this investigation, an SU-8 resist was characterized and optimized for X-ray lithographic applications by studying the cross-linking process of the resist under different conditions of resist thickness and X-ray exposure dose. The exposure dose of soft X-ray (SXR) irradiation at the average weighted wavelength of 1.20 nm from a plasma focus device ranges from 100 to 1600 mJ/cm(2) on the resist surface. Resist thickness varies from 3.5 to 15 mum. The cross-linking process of the resist during post-exposure bake (PEB) was accurately monitored using Fourier transform infrared (FT-IR) spectroscopy. The infrared absorption peaks at 862, 914, 972, and 1128 cm(-1) in the spectrum of the SU-8 resist were found to be useful indicators for the completion of cross-linking in the resist. Results of the experiments showed that the cross-linking of SU-8 was optimized at the exposure dose of 800 mJ/cm(2) for resist thicknesses of 3.5, 9.5, and 15 microm. PEB temperature was set at 95 degrees C and time at 3 min. The resist thickness was measured using interference patterns in the FT-IR spectra of the resist. Test structures with an aspect ratio 3:1 on 10 microm thick SU-8 resist film were obtained using scanning electron microscopy (SEM).

Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C.

PubMed

Applegate, Tanya L; Gaudieri, Silvana; Plauzolles, Anne; Chopra, Abha; Grebely, Jason; Lucas, Michaela; Hellard, Margaret; Luciani, Fabio; Dore, Gregory J; Matthews, Gail V

2015-01-01

Direct-acting antivirals (DAAs) are predicted to transform hepatitis C therapy, yet little is known about the prevalence of naturally occurring resistance mutations in recently acquired HCV. This study aimed to determine the prevalence and frequency of drug resistance mutations in the viral quasispecies among HIV-positive and -negative individuals with recent HCV. The NS3 protease, NS5A and NS5B polymerase genes were amplified from 50 genotype 1a participants of the Australian Trial in Acute Hepatitis C. Amino acid variations at sites known to be associated with possible drug resistance were analysed by ultra-deep pyrosequencing. A total of 12% of individuals harboured dominant resistance mutations, while 36% demonstrated non-dominant resistant variants below that detectable by bulk sequencing (that is, <20%) but above a threshold of 1%. Resistance variants (<1%) were observed at most sites associated with DAA resistance from all classes, with the exception of sofosbuvir. Dominant resistant mutations were uncommonly observed in the setting of recent HCV. However, low-level mutations to all DAA classes were observed by deep sequencing at the majority of sites and in most individuals. The significance of these variants and impact on future treatment options remains to be determined. Clinicaltrials.gov NCT00192569.

Resistivity, carrier trapping, and polarization phenomenon in semiconductor radiation detection materials

NASA Astrophysics Data System (ADS)

Du, Mao-Hua; Biswas, Koushik; Singh, David J.

2012-10-01

In this paper, we report theoretical studies of native defects and dopants in a number of room-temperature semiconductor radiation detection materials, i.e., CdTe, TlBr, and Tl6SeI4. We address several important questions, such as what causes high resistivity in these materials, what explains good μτ product (carrier mobility-lifetime product) in soft-lattice ionic compounds that have high defect density, and how to obtain high resistivity and low carrier trapping simultaneously. Our main results are: (1) shallow donors rather than deep ones are responsible for high resistivity in high-quality detectorgrade CdTe; (2) large dielectric screening and the lack of deep levels from low-energy native defects may contribute to the good μτ products for both electrons and holes in TlBr; (3) the polarization phenomenon in Tl6SeI4 is expected to be much reduced compared to that in TlBr.

Phenotypic Antimicrobial Susceptibility Testing with Deep Learning Video Microscopy.

PubMed

Yu, Hui; Jing, Wenwen; Iriya, Rafael; Yang, Yunze; Syal, Karan; Mo, Manni; Grys, Thomas E; Haydel, Shelley E; Wang, Shaopeng; Tao, Nongjian

2018-05-15

Timely determination of antimicrobial susceptibility for a bacterial infection enables precision prescription, shortens treatment time, and helps minimize the spread of antibiotic resistant infections. Current antimicrobial susceptibility testing (AST) methods often take several days and thus impede these clinical and health benefits. Here, we present an AST method by imaging freely moving bacterial cells in urine in real time and analyzing the videos with a deep learning algorithm. The deep learning algorithm determines if an antibiotic inhibits a bacterial cell by learning multiple phenotypic features of the cell without the need for defining and quantifying each feature. We apply the method to urinary tract infection, a common infection that affects millions of people, to determine the minimum inhibitory concentration of pathogens from both bacteria spiked urine and clinical infected urine samples for different antibiotics within 30 min and validate the results with the gold standard broth macrodilution method. The deep learning video microscopy-based AST holds great potential to contribute to the solution of increasing drug-resistant infections.

Laminar iridium coating produced by pulse current electrodeposition from chloride molten salt

NASA Astrophysics Data System (ADS)

Zhu, Li'an; Bai, Shuxin; Zhang, Hong; Ye, Yicong

2013-10-01

Due to the unique physical and chemical properties, Iridium (Ir) is one of the most promising oxidation-resistant coatings for refractory materials above 1800 °C in aerospace field. However, the Ir coatings prepared by traditional methods are composed of columnar grains throughout the coating thickness. The columnar structure of the coating is considered to do harm to its oxidation resistance. The laminar Ir coating is expected to have a better high-temperature oxidation resistance than the columnar Ir coating does. The pulse current electrodeposition, with three independent parameters: average current density (Jm), duty cycle (R) and pulse frequency (f), is considered to be a promising method to fabricate layered Ir coating. In this study, laminar Ir coatings were prepared by pulse current electrodeposition in chloride molten salt. The morphology, roughness and texture of the coatings were determined by scanning electron microscope (SEM), profilometer and X-ray diffraction (XRD), respectively. The results showed that the laminar Ir coatings were composed of a nucleation layer with columnar structure and a growth layer with laminar structure. The top surfaces of the laminar Ir coatings consisted of cauliflower-like aggregates containing many fine grains, which were separated by deep grooves. The laminar Ir coating produced at the deposition condition of 20 mA/cm2 (Jm), 10% (R) and 6 Hz (f) was quite smooth (Ra 1.01 ± 0.09 μm) with extremely high degree of preferred orientation of <1 1 1>, and its laminar structure was well developed with clear boundaries and uniform thickness of sub-layers.

Species distribution and susceptibility profile to fluconazole, voriconazole and MXP-4509 of 551 clinical yeast isolates from a Romanian multi-centre study.

PubMed

Minea, B; Nastasa, V; Moraru, R F; Kolecka, A; Flonta, M M; Marincu, I; Man, A; Toma, F; Lupse, M; Doroftei, B; Marangoci, N; Pinteala, M; Boekhout, T; Mares, M

2015-02-01

This is the first multi-centre study regarding yeast infections in Romania. The aim was to determine the aetiological spectrum and susceptibility pattern to fluconazole, voriconazole and the novel compound MXP-4509. The 551 isolates were identified using routine laboratory methods, matrix-assisted laser desorption ionisation time-of-flight mass spectrometry (MALDI-TOF MS) and DNA sequence analysis. Susceptibility testing was performed using the European Committee for Antimicrobial Susceptibility Testing (EUCAST) method and breakpoints. The yeasts originated from superficial infections (SUP, 51.5 %), bloodstream infections (BSI, 31.6 %) and deep-seated infections (DEEP, 16.9 %), from patients of all ages. Nine genera and 30 species were identified. The 20 Candida species accounted for 94.6 % of all isolates. C. albicans was the overall leading pathogen (50.5 %). Lodderomyces elongisporus is reported for the first time as a fungaemia cause in Europe. C. glabrata and Saccharomyces cerevisiae, as well as the non-Candida spp. and non-albicans Candida spp. groups, showed decreased fluconazole susceptibility (<75 %). The overall fluconazole resistance was 10.2 %. C. krusei accounted for 27 of the 56 fluconazole-resistant isolates. The overall voriconazole resistance was 2.5 % and was due mainly to C. glabrata and C. tropicalis isolates. Fluconazole resistance rates for the three categories of infection were similar to the overall value; voriconazole resistance rates differed: 4 % for BSI, 3.2 % for DEEP and 1.4 % for SUP. The antifungal activity of MXP-4509 was superior to voriconazole against C. glabrata and many fluconazole-resistant isolates. There was a large percentage of non-albicans Candida isolates. A large part of the high fluconazole resistance was not acquired but intrinsic, resulting from the high percentage of C. krusei.

Genetic diversity among pandemic 2009 influenza viruses isolated from a transmission chain

PubMed Central

2013-01-01

Background Influenza viruses such as swine-origin influenza A(H1N1) virus (A(H1N1)pdm09) generate genetic diversity due to the high error rate of their RNA polymerase, often resulting in mixed genotype populations (intra-host variants) within a single infection. This variation helps influenza to rapidly respond to selection pressures, such as those imposed by the immunological host response and antiviral therapy. We have applied deep sequencing to characterize influenza intra-host variation in a transmission chain consisting of three cases due to oseltamivir-sensitive viruses, and one derived oseltamivir-resistant case. Methods Following detection of the A(H1N1)pdm09 infections, we deep-sequenced the complete NA gene from two of the oseltamivir-sensitive virus-infected cases, and all eight gene segments of the viruses causing the remaining two cases. Results No evidence for the resistance-causing mutation (resulting in NA H275Y substitution) was observed in the oseltamivir-sensitive cases. Furthermore, deep sequencing revealed a subpopulation of oseltamivir-sensitive viruses in the case carrying resistant viruses. We detected higher levels of intra-host variation in the case carrying oseltamivir-resistant viruses than in those infected with oseltamivir-sensitive viruses. Conclusions Oseltamivir-resistance was only detected after prophylaxis with oseltamivir, suggesting that the mutation was selected for as a result of antiviral intervention. The persisting oseltamivir-sensitive virus population in the case carrying resistant viruses suggests either that a small proportion survive the treatment, or that the oseltamivir-sensitive virus rapidly re-establishes itself in the virus population after the bottleneck. Moreover, the increased intra-host variation in the oseltamivir-resistant case is consistent with the hypothesis that the population diversity of a RNA virus can increase rapidly following a population bottleneck. PMID:23587185

Deep Ultraviolet Light Emitters Based on (Al,Ga)N/GaN Semiconductor Heterostructures

NASA Astrophysics Data System (ADS)

Liang, Yu-Han

Deep ultraviolet (UV) light sources are useful in a number of applications that include sterilization, medical diagnostics, as well as chemical and biological identification. However, state-of-the-art deep UV light-emitting diodes and lasers made from semiconductors still suffer from low external quantum efficiency and low output powers. These limitations make them costly and ineffective in a wide range of applications. Deep UV sources such as lasers that currently exist are prohibitively bulky, complicated, and expensive. This is typically because they are constituted of an assemblage of two to three other lasers in tandem to facilitate sequential harmonic generation that ultimately results in the desired deep UV wavelength. For semiconductor-based deep UV sources, the most challenging difficulty has been finding ways to optimally dope the (Al,Ga)N/GaN heterostructures essential for UV-C light sources. It has proven to be very difficult to achieve high free carrier concentrations and low resistivities in high-aluminum-containing III-nitrides. As a result, p-type doped aluminum-free III-nitrides are employed as the p-type contact layers in UV light-emitting diode structures. However, because of impedance-mismatch issues, light extraction from the device and consequently the overall external quantum efficiency is drastically reduced. This problem is compounded with high losses and low gain when one tries to make UV nitride lasers. In this thesis, we provide a robust and reproducible approach to resolving most of these challenges. By using a liquid-metal-enabled growth mode in a plasma-assisted molecular beam epitaxy process, we show that highly-doped aluminum containing III-nitride films can be achieved. This growth mode is driven by kinetics. Using this approach, we have been able to achieve extremely high p-type and n-type doping in (Al,Ga)N films with high aluminum content. By incorporating a very high density of Mg atoms in (Al,Ga)N films, we have been able to show, by temperature-dependent photoluminescence, that the activation energy of the acceptors is substantially lower, thus allowing a higher hole concentration than usual to be available for conduction. It is believed that the lower activation energy is a result of an impurity band tail induced by the high Mg concentration. The successful p-type doping of high aluminum-content (Al,Ga)N has allowed us to demonstrate operation of deep ultraviolet LEDs emitting at 274 nm. This achievement paves the way for making lasers that emit in the UV-C region of the spectrum. In this thesis, we performed preliminary work on using our structures to make UV-C lasers based on photonic crystal nanocavity structures. The nanocavity laser structures show that the threshold optical pumping power necessary to reach lasing is much lower than in conventional edge-emitting lasers. Furthermore, the photonic crystal nanocavity structure has a small mode volume and does not need mirrors for optical feedback. These advantages significantly reduce material loss and eliminate mirror loss. This structure therefore potentially opens the door to achieving efficient and compact lasers in the UV-C region of the spectrum.

Calculation method of spin accumulations and spin signals in nanostructures using spin resistors

NASA Astrophysics Data System (ADS)

Torres, Williams Savero; Marty, Alain; Laczkowski, Piotr; Jamet, Matthieu; Vila, Laurent; Attané, Jean-Philippe

2018-02-01

Determination of spin accumulations and spin currents is essential for a deep understanding of spin transport in nanostructures and further optimization of spintronic devices. So far, they are easily obtained using different approaches in nanostructures composed of few elements; however their calculation becomes complicated as the number of elements increases. Here, we propose a 1-D spin resistor approach to calculate analytically spin accumulations, spin currents and magneto-resistances in heterostructures. Our method, particularly applied to multi-terminal metallic nanostructures, provides a fast and systematic mean to determine such spin properties in structures where conventional methods remain complex.

Application of the marine Ex-Bz transient system for delineating near shore resistive targets

NASA Astrophysics Data System (ADS)

Levi, Eldad; Goldman, Mark

2017-09-01

Under certain conditions, multidimensional coastal effect significantly enhances relative target response of the broadside transient marine Ex-Bz system. The effect is caused by a redistribution of the induced currents between the resistive target and the sea bottom compared to that existing in a 1-D geometry. As a result, the effect strongly depends on specific geoelectric conditions in the near-shore environment. The first study of the effect in the Mediterranean coast of central Israel was addressing shallow groundwater problem under specific geoelectric, hydrogeological and geomorphological conditions. Under different conditions (e.g. deep targets and sharp near-shore bathymetry), the influence of the effect on target response might be significantly different. More general analysis carried out in this study comprises various geoelectric scenarios that include both shallow and deep resistive targets at different distances from the shore line as well as various geometries of the target and the near-shore bathymetry. The study includes three major exploration aspects of the system, namely signal detectability, lateral and vertical resolution. Taking into account poor lateral resolution of the classical frequency domain CSEM and the limited application in shallow sea, the described broadside transient Ex-Bz system might represent a desired alternative for delineating shallow and deep resistive targets in transition zone.

Development of variable LRFD \\0x03C6 factors for deep foundation design due to site variability.

DOT National Transportation Integrated Search

2012-04-01

The current design guidelines of Load and Resistance Factor Design (LRFD) specifies constant values : for deep foundation design, based on analytical method selected and degree of redundancy of the pier. : However, investigation of multiple sites in ...

Step-off, vertical electromagnetic responses of a deep resistivity layer buried in marine sediments

NASA Astrophysics Data System (ADS)

Jang, Hangilro; Jang, Hannuree; Lee, Ki Ha; Kim, Hee Joon

2013-04-01

A frequency-domain, marine controlled-source electromagnetic (CSEM) method has been applied successfully in deep water areas for detecting hydrocarbon (HC) reservoirs. However, a typical technique with horizontal transmitters and receivers requires large source-receiver separations with respect to the target depth. A time-domain EM system with vertical transmitters and receivers can be an alternative because vertical electric fields are sensitive to deep resistive layers. In this paper, a time-domain modelling code, with multiple source and receiver dipoles that are finite in length, has been written to investigate transient EM problems. With the use of this code, we calculate step-off responses for one-dimensional HC reservoir models. Although the vertical electric field has much smaller amplitude of signal than the horizontal field, vertical currents resulting from a vertical transmitter are sensitive to resistive layers. The modelling shows a significant difference between step-off responses of HC- and water-filled reservoirs, and the contrast can be recognized at late times at relatively short offsets. A maximum contrast occurs at more than 4 s, being delayed with the depth of the HC layer.

Neurostimulation for Drug-Resistant Epilepsy

PubMed Central

DeGiorgio, Christopher M.; Krahl, Scott E.

2013-01-01

Purpose of Review: The purpose of this review is to provide an evidence-based update on the neurostimulation options available for patients with drug-resistant epilepsy in the United States and in European countries. Recent Findings: The field of neurostimulation for epilepsy has grown dramatically since 1997, when vagus nerve stimulation became the first device to be approved for epilepsy by the US Food and Drug Administration (FDA). New data from recently completed randomized controlled trials are available for deep brain stimulation of the anterior thalamus, responsive neurostimulation, and trigeminal nerve stimulation. Although vagus nerve stimulation is the only device currently approved in the United States, deep brain stimulation and responsive neurostimulation devices are awaiting FDA approval. Deep brain stimulation, trigeminal nerve stimulation, and transcutaneous vagus nerve stimulation are now approved for epilepsy in the European Union. In this article, the mechanisms of action, safety, and efficacy of new neurostimulation devices are reviewed, and the key advantages and disadvantages of each are discussed. Summary: The exponential growth of the field of neuromodulation for epilepsy is an exciting development; these new devices provide physicians with new options for patients with drug-resistant epilepsy. PMID:23739108

The effects of lithium counterdoping on radiation damage and annealing in n(+)p silicon solar cells

NASA Technical Reports Server (NTRS)

Weinberg, I.; Brandhorst, H. W., Jr.; Mehta, S.; Swartz, C. K.

1984-01-01

Boron-doped silicon n(+)p solar cells were counterdoped with lithium by ion implantation and the resultant n(+)p cells irradiated by 1 MeV electrons. Performance parameters were determined as a function of fluence and a deep level transient spectroscopy (DLTS) study was conducted. The lithium counterdoped cells exhibited significantly increased radiation resistance when compared to boron doped control cells. Isochronal annealing studies of cell performance indicate that significant annealing occurs at 100 C. Isochronal annealing of the deep level defects showed a correlation between a single defect at E sub v + 0.43 eV and the annealing behavior of short circuit current in the counterdoped cells. The annealing behavior was controlled by dissociation and recombination of this defect. The DLTS studies showed that counterdoping with lithium eliminated three deep level defects and resulted in three new defects. The increased radiation resistance of the counterdoped cells is due to the interaction of lithium with oxygen, single vacancies and divacancies. The lithium-oxygen interaction is the most effective in contributing to the increased radiation resistance.

Double-injection, deep-impurity switch development

NASA Technical Reports Server (NTRS)

Selim, F. A.; Whitson, D. W.

1983-01-01

The overall objective of this program is the development of device design and process techniques for the fabrication of a double-injection, deep-impurity (DI)(2) silicon switch that operates in the 1-10 kV range with conduction current of 10 and 1A, respectively. Other major specifications include a holding voltage of 0 to 5 volts at 1 A anode current, 10 microsecond switching time, and power dissipation of 50 W at 75 C. This report describes work that shows how the results obtained at the University of Cincinnati under NASA Grant NSG-3022 have been applied to larger area and higher voltage devices. The investigations include theoretical, analytical, and experimental studies of device design and processing. Methods to introduce deep levels, such as Au diffusion and electron irradiation, have been carried out to "pin down' the Fermi level and control device-switching characteristics. Different anode, cathode, and gate configurations are presented. Techniques to control the surface electric field of planar structures used for (DI)(2) switches are examined. Various sections of this report describe the device design, wafer-processing techniques, and various measurements which include ac and dc characteristics, 4-point probe, and spreading resistance.

An extremely simple macroscale electronic skin realized by deep machine learning.

PubMed

Sohn, Kee-Sun; Chung, Jiyong; Cho, Min-Young; Timilsina, Suman; Park, Woon Bae; Pyo, Myungho; Shin, Namsoo; Sohn, Keemin; Kim, Ji Sik

2017-09-11

Complicated structures consisting of multi-layers with a multi-modal array of device components, i.e., so-called patterned multi-layers, and their corresponding circuit designs for signal readout and addressing are used to achieve a macroscale electronic skin (e-skin). In contrast to this common approach, we realized an extremely simple macroscale e-skin only by employing a single-layered piezoresistive MWCNT-PDMS composite film with neither nano-, micro-, nor macro-patterns. It is the deep machine learning that made it possible to let such a simple bulky material play the role of a smart sensory device. A deep neural network (DNN) enabled us to process electrical resistance change induced by applied pressure and thereby to instantaneously evaluate the pressure level and the exact position under pressure. The great potential of this revolutionary concept for the attainment of pressure-distribution sensing on a macroscale area could expand its use to not only e-skin applications but to other high-end applications such as touch panels, portable flexible keyboard, sign language interpreting globes, safety diagnosis of social infrastructures, and the diagnosis of motility and peristalsis disorders in the gastrointestinal tract.

Enzymatic microbial Mn(II) oxidation and Mn biooxide production in the Guaymas Basin deep-sea hydrothermal plume

NASA Astrophysics Data System (ADS)

Dick, Gregory J.; Clement, Brian G.; Webb, Samuel M.; Fodrie, F. Joel; Bargar, John R.; Tebo, Bradley M.

2009-11-01

Microorganisms play important roles in mediating biogeochemical reactions in deep-sea hydrothermal plumes, but little is known regarding the mechanisms that underpin these transformations. At Guaymas Basin (GB) in the Gulf of California, hydrothermal vents inject fluids laden with dissolved Mn(II) (dMn) into the deep waters of the basin where it is oxidized and precipitated as particulate Mn(III/IV) oxides, forming turbid hydrothermal "clouds". Previous studies have predicted extremely short residence times for dMn at GB and suggested they are the result of microbially-mediated Mn(II) oxidation and precipitation. Here we present biogeochemical results that support a central role for microorganisms in driving Mn(II) oxidation in the GB hydrothermal plume, with enzymes being the primary catalytic agent. dMn removal rates at GB are remarkably fast for a deep-sea hydrothermal plume (up to 2 nM/h). These rapid rates were only observed within the plume, not in background deep-sea water above the GB plume or at GB plume depths (˜1750-2000 m) in the neighboring Carmen Basin, where there is no known venting. dMn removal is dramatically inhibited under anoxic conditions and by the presence of the biological poison, sodium azide. A conspicuous temperature optimum of dMn removal rates (˜40 °C) and a saturation-like (i.e. Michaelis-Menten) response to O 2 concentration were observed, indicating an enzymatic mechanism. dMn removal was resistant to heat treatment used to select for spore-forming organisms, but very sensitive to low concentrations of added Cu, a cofactor required by the putative Mn(II)-oxidizing enzyme. Extended X-ray absorption fine structure spectroscopy (EXAFS) and synchrotron radiation-based X-ray diffraction (SR-XRD) revealed the Mn oxides to have a hexagonal birnessite or δ-MnO 2-like mineral structure, indicating that these freshly formed deep-sea Mn oxides are strikingly similar to primary biogenic Mn oxides produced by laboratory cultures of bacteria. Overall, these results reveal a vigorous Mn biogeochemical cycle in the GB hydrothermal plume, where a distinct microbial community enzymatically catalyzes rapid Mn(II) oxidation and the production of Mn biooxides.

Dual-wavelength photo-Hall effect spectroscopy of deep levels in high resistive CdZnTe with negative differential photoconductivity

NASA Astrophysics Data System (ADS)

Musiienko, A.; Grill, R.; Moravec, P.; Korcsmáros, G.; Rejhon, M.; Pekárek, J.; Elhadidy, H.; Šedivý, L.; Vasylchenko, I.

2018-04-01

Photo-Hall effect spectroscopy was used in the study of deep levels in high resistive CdZnTe. The monochromator excitation in the photon energy range 0.65-1.77 eV was complemented by a laser diode high-intensity excitation at selected photon energies. A single sample characterized by multiple unusual features like negative differential photoconductivity and anomalous depression of electron mobility was chosen for the detailed study involving measurements at both the steady and dynamic regimes. We revealed that the Hall mobility and photoconductivity can be both enhanced and suppressed by an additional illumination at certain photon energies. The anomalous mobility decrease was explained by an excitation of the inhomogeneously distributed deep level at the energy Ev + 1.0 eV, thus enhancing potential non-uniformities. The appearance of negative differential photoconductivity was interpreted by an intensified electron occupancy of that level by a direct valence band-to-level excitation. Modified Shockley-Read-Hall theory was used for fitting experimental results by a model comprising five deep levels. Properties of the deep levels and their impact on the device performance were deduced.

MR Anatomy of Deep Brain Nuclei with Special Reference to Specific Diseases and Deep Brain Stimulation Localization

PubMed Central

Telford, Ryan; Vattoth, Surjith

2014-01-01

Summary Diseases affecting the basal ganglia and deep brain structures vary widely in etiology and include metabolic, infectious, ischemic, and neurodegenerative conditions. Some neurologic diseases, such as Wernicke encephalopathy or pseudohypoparathyroidism, require specific treatments, which if unrecognized could lead to further complications. Other pathologies, such as hypertrophic olivary degeneration, if not properly diagnosed may be mistaken for a primary medullary neoplasm and create unnecessary concern. The deep brain structures are complex and can be difficult to distinguish on routine imaging. It is imperative that radiologists first understand the intrinsic anatomic relationships between the different basal ganglia nuclei and deep brain structures with magnetic resonance (MR) imaging. It is important to understand the "normal" MR signal characteristics, locations, and appearances of these structures. This is essential to recognizing diseases affecting the basal ganglia and deep brain structures, especially since most of these diseases result in symmetrical, and therefore less noticeable, abnormalities. It is also crucial that neurosurgeons correctly identify the deep brain nuclei presurgically for positioning deep brain stimulator leads, the most important being the subthalamic nucleus for Parkinson syndromes and the thalamic ventral intermediate nucleus for essential tremor. Radiologists will be able to better assist clinicians in diagnosis and treatment once they are able to accurately localize specific deep brain structures. PMID:24571832

A promising tool for subsurface permafrost mapping-An application of airborne geophysics from the Yukon River Basin, Alaska

USGS Publications Warehouse

Abraham, Jared E.

2011-01-01

In the area of Fort Yukon, the AEM survey shows elevated resistivities extending to depth, likely indicative of thick permafrost. This depth corresponds well to observations from a borehole drilled in the area in the late 1990s, which detected permafrost to a depth of about 100 meters (Clark and others, 2009). In contrast to the area of Fort Yukon, the Yukon River and its floodplain are not associated with deep resistive sediments, suggesting a lack of deep permafrost, at least within the depth range of the AEM mapping (fig. 3).

The Effect of Deep Brain Stimulation on the Speech Motor System

ERIC Educational Resources Information Center

Mücke, Doris; Becker, Johannes; Barbe, Michael T.; Meister, Ingo; Liebhart, Lena; Roettger, Timo B.; Dembek, Till; Timmermann, Lars; Grice, Martine

2014-01-01

Purpose: Chronic deep brain stimulation of the nucleus ventralis intermedius is an effective treatment for individuals with medication-resistant essential tremor. However, these individuals report that stimulation has a deleterious effect on their speech. The present study investigates one important factor leading to these effects: the…

Resolution of Singularities Introduced by Hierarchical Structure in Deep Neural Networks.

PubMed

Nitta, Tohru

2017-10-01

We present a theoretical analysis of singular points of artificial deep neural networks, resulting in providing deep neural network models having no critical points introduced by a hierarchical structure. It is considered that such deep neural network models have good nature for gradient-based optimization. First, we show that there exist a large number of critical points introduced by a hierarchical structure in deep neural networks as straight lines, depending on the number of hidden layers and the number of hidden neurons. Second, we derive a sufficient condition for deep neural networks having no critical points introduced by a hierarchical structure, which can be applied to general deep neural networks. It is also shown that the existence of critical points introduced by a hierarchical structure is determined by the rank and the regularity of weight matrices for a specific class of deep neural networks. Finally, two kinds of implementation methods of the sufficient conditions to have no critical points are provided. One is a learning algorithm that can avoid critical points introduced by the hierarchical structure during learning (called avoidant learning algorithm). The other is a neural network that does not have some critical points introduced by the hierarchical structure as an inherent property (called avoidant neural network).

Rayleigh Wave Group Velocity Tomography from Microseisms in the Acambay Graben

NASA Astrophysics Data System (ADS)

Valderrama Membrillo, S.; Aguirre, J.; Zuñiga-Davila, R.; Iglesias, A.

2017-12-01

The Acambay graben is one of the most outstanding structures of the Trans-Mexican Volcanic Belt. The Acambay graben has a length of 80km and 15 to 18 km wide and reaches a maximum height of 400 m in its central part. We obtained the group velocity seismic tomography for the Acamaby graben for three different frequencies (f = 0.1, 0.2 and 0.3 Hz). The graben was divided into 6x6 km cells for the tomography and covered a total area of 1008 km2. Seismic noise data from 10 broadband seismic stations near the Acambay graben were used to extract the surface wave arrival-times between all station pairs. The Green's function was recovered in each stations pair by cross-correlation technique. This technique was applied to seismic recordings collected on the vertical component of 10 broadband stations for a continuous recording period of 5 months. Data processing consisted of removing instrumental response, mean, and trend. After that, we applied time domain normalization, a spectral whitening and applied band-pas filtering of 0.1 to 1 Hz. There are shallow studies of the Acambay graben. But little is known of the distribution of deep graben structures. This study estimated the surface wave velocity deep structure. The structures at the frequency 0.3 Hz indicate a lower depth than the remaining frequencies. The result for this frequency show consistencies with previous studies of gravimetry and resistivity, also defines the fault system of Temascalcingo.

Electrical Properties of the Hanging Wall of the Alpine Fault, New Zealand, from DFDP-2 Wireline Data

NASA Astrophysics Data System (ADS)

Remaud, L.; Doan, M. L.; Pezard, P. A.; Celerier, B. P.; Townend, J.; Sutherland, R.; Toy, V.

2015-12-01

The DFDP-2B borehole drilled at Whataroa, New Zealand, provides a first-hand rare opportunity to investigate the damage pattern next to a major active fault. It was drilled along more than 893 m (820 m TVD) within hanging-wall protomylonites and mylonites. The interval between 264 m and 886 m (measured depth) was intensively investigated by wireline logging. Notably, electrical laterolog data were recorded over almost 3 km of cumulative logs, providing a homogeneous, uniformly sampled recording of the electrical properties of the borehole wall. The laterolog tool measures resistivity with two different electrode configurations, and hence achieves two different depths of penetration. Numerical simulations of the tool's response show that the true resistivity of the rock is close to the deep resistivity measurement, which in DFDP-2 varies between 300 Ω.m and 700 Ω.m. The shallow resistivity is about 75% of this value, as it is more sensitive to the presence of conductive borehole fluid. However, the large borehole diameter (averaging 8.5 inch = or 21.59 cm) only partially explains this value. The strong anisotropy suggested by laboratory measurements on outcrop samples also contributes to the separation between deep and shallow resistivity. The shallow and deep resistivities exhibit many significant drops that are coincident with the presence of fractures detected in borehole televiewer data. More than 700 electrical anomalies have been manually picked. The major ones are correlated with attenuation of the sonic data and sometimes with anomalies in fluid conductivity (temperature and conductivity). Their frequency gradually increases with depth, reaching a plateau below 700 m. This increase with depth may be related to closer proximity to the Alpine Fault.

Fabrication of a high aspect ratio thick silicon wafer mold and electroplating using flipchip bonding for MEMS applications

NASA Astrophysics Data System (ADS)

Kim, Bong-Hwan; Kim, Jong-Bok

2009-06-01

We have developed a microfabrication process for high aspect ratio thick silicon wafer molds and electroplating using flipchip bonding with THB 151N negative photoresist (JSR micro). This fabrication technique includes large area and high thickness silicon wafer mold electroplating. The process consists of silicon deep reactive ion etching (RIE) of the silicon wafer mold, photoresist bonding between the silicon mold and the substrate, nickel electroplating and a silicon removal process. High thickness silicon wafer molds were made by deep RIE and flipchip bonding. In addition, nickel electroplating was developed. Dry film resist (ORDYL MP112, TOK) and thick negative-tone photoresist (THB 151N, JSR micro) were used as bonding materials. In order to measure the bonding strength, the surface energy was calculated using a blade test. The surface energy of the bonding wafers was found to be 0.36-25.49 J m-2 at 60-180 °C for the dry film resist and 0.4-1.9 J m-2 for THB 151N in the same temperature range. Even though ORDYL MP112 has a better value of surface energy than THB 151N, it has a critical disadvantage when it comes to removing residue after electroplating. The proposed process can be applied to high aspect ratio MEMS structures, such as air gap inductors or vertical MEMS probe tips.

Fornix deep brain stimulation enhances acetylcholine levels in the hippocampus.

PubMed

Hescham, Sarah; Jahanshahi, Ali; Schweimer, Judith V; Mitchell, Stephen N; Carter, Guy; Blokland, Arjan; Sharp, Trevor; Temel, Yasin

2016-11-01

Deep brain stimulation (DBS) of the fornix has gained interest as a potential therapy for advanced treatment-resistant dementia, yet the mechanism of action remains widely unknown. Previously, we have reported beneficial memory effects of fornix DBS in a scopolamine-induced rat model of dementia, which is dependent on various brain structures including hippocampus. To elucidate mechanisms of action of fornix DBS with regard to memory restoration, we performed c-Fos immunohistochemistry in the hippocampus. We found that fornix DBS induced a selective activation of cells in the CA1 and CA3 subfields of the dorsal hippocampus. In addition, hippocampal neurotransmitter levels were measured using microdialysis before, during and after 60 min of fornix DBS in a next experiment. We observed a substantial increase in the levels of extracellular hippocampal acetylcholine, which peaked 20 min after stimulus onset. Interestingly, hippocampal glutamate levels did not change compared to baseline. Therefore, our findings provide first experimental evidence that fornix DBS activates the hippocampus and induces the release of acetylcholine in this region.

Calibration of Resistance Factors Needed in the LRFD Design of Drilled Shafts

DOT National Transportation Integrated Search

2010-09-01

The first report on Load and Resistance Factor Design (LRFD) calibration of driven piles in Louisiana (LTRC Final Report 449) was : completed in May 2009. As a continuing effort to implement the LRFD design methodology for deep foundations in Louisia...

Calibration of resistance factors needed in the LRFD design of drilled shafts.

DOT National Transportation Integrated Search

2010-09-01

The first report on Load and Resistance Factor Design (LRFD) calibration of driven piles in Louisiana (LTRC Final Report 449) was completed in May 2009. As a continuing effort to implement the LRFD design methodology for deep foundations in Louisiana...

Calibration of resistance factors for drilled shafts for the new FHWA design method.

DOT National Transportation Integrated Search

2013-01-01

The Load and Resistance Factor Design (LRFD) calibration of deep foundation in Louisiana was first completed for driven piles (LTRC Final Report 449) in May 2009 and then for drilled shafts using 1999 FHWA design method (ONeill and Reese method) (...

Calibration of resistance factors needed in the LRFD design of drilled shafts.

DOT National Transportation Integrated Search

2010-09-01

The first report on Load and Resistance Factor Design (LRFD) calibration of driven piles in Louisiana (LTRC Final Report 449) was : completed in May 2009. As a continuing effort to implement the LRFD design methodology for deep foundations in Louisia...

Pile/shaft designs using artificial neural networks (i.e., genetic programming) with spatial variability considerations : [summary].

DOT National Transportation Integrated Search

2014-03-01

In this project, University of Florida researchers : sought to improve the unit skin friction and tip : resistance correlations embedded in the FB-Deep : software algorithm for estimating driven pile and : drilled shaft resistance. They utilized an a...

Computer analysis of the negative differential resistance switching phenomenon of double-injection devices

NASA Technical Reports Server (NTRS)

Shieh, Tsay-Jiu

1989-01-01

By directly solving the semiconductor differential equations for the double-injection (DI) devices involving two interacting deep levels, the authors studied the negative differential resistance switching characteristic and its relationship with the device dimension, doping level, and dependence on the deep impurity profile. Computer simulation showed that although one can increase the threshold voltage by increasing the device length, the excessive holding voltage that would follow would put this device in a very limited application such as pulse power source. The excessive leakage current in the low conductance state also jeopardizes the attempt to use the device for any practical purpose. Unless there are new materials and deep impurities found that have a great differential hole and electron capture cross sections and a reasonable energy bandgap for low intrinsic carrier concentration, no big improvement in the fate of DI devices is expected in the near future.

The effect of millisecond flash lamp annealing on electrical and structural properties of ZnO:Al/Si structures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lindberg, P. F.; Riise, H. N.; Vines, L.

2016-05-14

The effect of millisecond flash lamp annealing (FLA) on aluminum doped ZnO (AZO) films and their interface with Si have been studied. The AZO films were deposited by magnetron sputtering on Si (100) substrates. The electrical and structural properties of the film and AZO/Si structures were characterized by current–voltage, capacitance–voltage, and deep level transient spectroscopy measurements, X-ray diffraction, and secondary ion mass spectrometry. The resistivity of the AZO film is reduced to a close to state-of-the-art value of 2 × 10{sup −4} Ω cm after FLA for 3 ms with an average energy density of 29 J/cm{sup 2}. In addition, most of the interfacial defects energymore » levels are simultaneously annealed out, except for one persisting shallow level, tentatively assigned to the vacancy-oxygen complex in Si, which was not affected by FLA. Subsequent to the FLA, the samples were treated in N{sub 2} or forming gas (FG) (N{sub 2}/H{sub 2}, 90/10%{sub mole}) ambient at 200–500 °C. The latter samples maintained the low resistivity achieved after the FLA, but not the former ones. The interfacial defect level persisting after the FLA is removed by the FG treatment, concurrently as another level emerges at ∼0.18 eV below the conduction band. The electrical data of the AZO films are discussed in term of point defects controlling the resistivity, and it is argued that the FLA promotes formation of electrically neutral clusters of Zink vacancies (V{sub Zn}'s) rather than passivating/compensating complexes between the Al donors and V{sub Zn}'s.« less

Integrating hydrogeophysics and hydrological tracers to characterise the spatial structure of groundwater storage in the critical zone of montane environments

NASA Astrophysics Data System (ADS)

Dick, J.; Tetzlaff, D.; Bradford, J.; Soulsby, C.

2015-12-01

It is increasingly recognised that groundwater (GW) in montane watersheds has a major influence on the distribution of vegetation communities and ecosystem function, as well as sustaining downstream river flows. In glaciated landscapes, complex and heterogenous drift deposits can have a dominant influence on GW stores and fluxes, and form a poorly understood component of the critical zone. Given the logistical problems and limitations of drilling observation wells in such terrain, hydrogeophysics has outstanding potential to help characterise aquifer structure and understand shallow GW in the critical zone of montane environments. We present the results of electrical resistivity tomography (ERT) surveys in an intensively monitored 3.2km2 watershed in the Scottish Highlands with a strong glacial past. We sought to characterise the structure and spatial organisation of GW stores in diverse quaternary drift deposits. This utilized distributed ERT transects that provided a basis for spatial interpolation using geostatistical methods and high resolution LiDAR surveys. Some transects coincided with shallow observation wells that were used to "ground-truth" the inversion of resistivity data. The surveys showed that the drifts covered around 70% of the catchment and varied from 5m deep on the hillslopes to 40m in the valleys. The water table was within 0.2m of the soil surface in the valley bottom areas and about 1.5m deep on steeper hillslopes. The water content of drifts inferred by the ERT surveys and characterisation of the aquifer properties showed highest water content in the peat (~80%) and basal till (20-30%), and low storage in moraine deposits (10%). Upscaling these estimates of inferred storage to the catchment scale indicated around ~2-3 m of GW storage, equivalent to around 4-6 years of effective precipitation. This generally compared well with independent storage estimates inferred from long-term stable isotope time series collected from the aquifers. Elucidating the importance of the critical zone for water storage in montane environments using ERT provides a basis for predicting their likely resistance and resilience to environmental change. This is of practical importance in the Scottish uplands where both climate and land use change are likely to have implications for water availability.

Structure and mechanical properties of a two-layered material produced by the E-beam surfacing of Ta and Nb on the titanium base after multiple rolling

NASA Astrophysics Data System (ADS)

Bataev, V. A.; Golkovski, M. G.; Samoylenko, V. V.; Ruktuev, A. A.; Polyakov, I. A.; Kuksanov, N. K.

2018-04-01

The study has been conducted in line with the current approach to investigation of materials obtained by considerably deep surface alloying of the titanium substrate with Ta, Nb, and Zr. The thickness of the resulting alloyed layer was equal to 2 mm. The coating was formed through weld deposition of a powder with the use of a high-voltage electron beam in the air. It has been lately demonstrated that manufactured such a way alloyed layers possess corrosion resistance which is significantly higher than the resistance of titanium substrates. It has already been shown that such two-layered materials are weldable. The study objective is to investigate the feasibility of rolling for necking the sheets with the Ti-Ta-Nb anticorrosion coating with further fourfold decrease in their thickness. The research is also aimed at investigation of the material properties after rolling. Anticorrosion layers were formed both on CP-titanium and on VT14 (Ti-4Al-3Mo-1 V) durable titanium alloy. The results of chemical composition determination, structure examination, X-ray phase analysis and mechanical properties observations (including bending properties of the alloyed layers) are presented in the paper. The combination of welding, rolling, and bending enables the manufacture of corrosion-resistant vessels and process pipes which are made from the developed material and find technological application.

Uniform Self-rectifying Resistive Switching Behavior via Preformed Conducting Paths in a Vertical-type Ta2O5/HfO2-x Structure with a Sub-μm(2) Cell Area.

PubMed

Yoon, Jung Ho; Yoo, Sijung; Song, Seul Ji; Yoon, Kyung Jean; Kwon, Dae Eun; Kwon, Young Jae; Park, Tae Hyung; Kim, Hye Jin; Shao, Xing Long; Kim, Yumin; Hwang, Cheol Seong

2016-07-20

To replace or succeed the present NAND flash memory, resistive switching random access memory (ReRAM) should be implemented in the vertical-type crossbar array configuration. The ReRAM cell must have a highly reproducible resistive switching (RS) performance and an electroforming-free, self-rectifying, low-power-consumption, multilevel-switching, and easy fabrication process with a deep sub-μm(2) cell area. In this work, a Pt/Ta2O5/HfO2-x/TiN RS memory cell fabricated in the form of a vertical-type structure was presented as a feasible contender to meet the above requirements. While the fundamental RS characteristics of this material based on the electron trapping/detrapping mechanisms have been reported elsewhere, the influence of the cell scaling size to 0.34 μm(2) on the RS performance by adopting the vertical integration scheme was carefully examined in this work. The smaller cell area provided much better switching uniformity while all the other benefits of this specific material system were preserved. Using the overstressing technique, the nature of RS through the localized conducting path was further examined, which elucidated the fundamental difference between the present material system and the general ionic-motion-related bipolar RS mechanism.

IODP Expedition 340T: Borehole Logging at Atlantis Massif Oceanic Core Complex

NASA Astrophysics Data System (ADS)

Blackman, D.; Slagle, A.; Harding, A.; Guerin, G.; McCaig, A.

2013-03-01

Integrated Ocean Drilling Program (IODP) Expedition 340T returned to the 1.4-km-deep Hole U1309D at Atlantis Massif to carry out borehole logging including vertical seismic profiling (VSP). Seismic, resistivity, and temperature logs were obtained throughout the geologic section in the footwall of this oceanic core complex. Reliable downhole temperature measurements throughout and the first seismic coverage of the 800-1400 meters below seafloor (mbsf) portion of the section were obtained. Distinct changes in velocity, resistivity, and magnetic susceptibility characterize the boundaries of altered, olivine-rich troctolite intervals within the otherwise dominantly gabbroic se-quence. Some narrow fault zones also are associated with downhole resistivity or velocity excursions. Small deviations in temperature were measured in borehole fluid adjacent to known faults at 750 mbsf and 1100 mbsf. This suggests that flow of seawater remains active along these zones of faulting and rock alteration. Vertical seismic profile station coverage at zero offset now extends the full length of the hole, including the uppermost 150 mbsf, where detachment processes are expected to have left their strongest imprint. Analysis of wallrock properties, together with alteration and structural characteristics of the cores from Site U1309, highlights the likely interplay between lithology, structure, lithospheric hydration, and core complex evolution. doi:10.2204/iodp.sd.15.04.2013

A joint TEM-HLEM geophysical approach to borehole sitting in deeply weathered granitic terrains.

PubMed

Meju, M A; Fontes, S L; Ulugergerli, E U; La Terra, E F; Germano, C R; Carvalho, R M

2001-01-01

The accurate location of aquiferous fracture zones in granite beneath a > 50 m thick weathered mantle in semi-arid regions is a major hydrogeological problem. It is expected that the zone of intensive fracturing will be more susceptible to weathering and thus be characterized by the thickest development of saprolite, a good electrically conductive target for deep-probing electromagnetic systems. The single-loop transient electromagnetic (TEM) technique is well known to have the capability for detecting concealed steep mineralized targets in mining environments and can be adapted to this hydrogeological problem. We propose that combining the conventional frequency-domain horizontal-loop electromagnetic (HLEM) and single-loop TEM is an effective practical approach to locating concealed aquiferous fracture zones. In the supporting case studies presented here, we deployed multifrequency HLEM profiling (with 50 m transmitter-receiver separation) and TEM soundings with contiguous 10 or 20 m sided loops along the survey lines in a granitic terrain affected by deep (> 50 m) weathering in northeast Brazil. A somewhat layered structure consisting of resistive hardpan/leached zone, conductive saprolite, and resistive basement is identifiable in the typical TEM depth sounding data. We obtained coincident HLEM and TEM anomalies at all the sites, enabling a relatively straightforward selection of potential drilling positions. Simple resistivity-depth transformation of the TEM data was done for each site, yielding an approximate section from which drilling depths were estimated. All of the boreholes located were successful. Although our results appear to indicate that the single-loop TEM method could be used independently for borehole sitting in deeply weathered granitic terrains and that the weathering profile over granite can be mapped using TEM depth soundings of appropriate observational bandwidth, we recommend a joint electromagnetic approach for optimal well sitting.

Focusing properties of x-ray polymer refractive lenses from SU-8 resist layer

NASA Astrophysics Data System (ADS)

Snigirev, Anatoly A.; Snigireva, Irina; Drakopoulos, Michael; Nazmov, Vladimir; Reznikova, Elena; Kuznetsov, Sergey; Grigoriev, Maxim; Mohr, Jurgen; Saile, Volker

2003-12-01

Compound refractive lenses printed in Al and Be are becoming the key X-ray focusing and imaging components of beamline optical layouts at the 3rd generation synchrotron radiation sources. Recently proposed planar optical elements based on Si, diamond etc. may substantially broaden the spectrum of the refractive optics applicability. Planar optics has focal distances ranging from millimeters to tens of meters offering nano- and micro-focusing lenses, as well as beam condensers and collimators. Here we promote deep X-ray lithography and LIGA-type techniques to create high aspect-ratio lens structures for different optical geometries. Planar X-ray refractive lenses were manufactured in 1 mm thick SU-8 negative resist layer by means of deep synchrotron radiation lithography. The focusing properties of lenses were studied at ID18F and BM5 beamlines at the ESRF using monochromatic radiation in the energy range of 10 - 25 keV. By optimizing lens layout, mask making and resist processing, lenses of good quality were fabricated. The resolution of about 270 nm (FWHM) with gain in the order of 300 was measured at 14 keV. In-line holography of B-fiber was realized in imaging and projection mode with a magnification of 3 and 20, respectively. Submicron features of the fiber were clearly resolved. A radiation stability test proved that the fabricated lenses don't change focusing characteristics after dose of absorbed X-ray radiation of about 2 MJ/cm3. The unique radiation stability along with the high effficiency of SU8 lenses opens wide range of their synchrotron radiation applications such as microfocusing elements, condensers and collimators.

Portable audio magnetotellurics - experimental measurements and joint inversion with radiomagnetotelluric data from Gotland, Sweden

NASA Astrophysics Data System (ADS)

Shan, Chunling; Kalscheuer, Thomas; Pedersen, Laust B.; Erlström, Mikael; Persson, Lena

2017-08-01

Field setup of an audio magnetotelluric (AMT) station is a very time consuming and heavy work load. In contrast, radio magnetotelluric (RMT) equipment is more portable and faster to deploy but has shallower investigation depth owing to its higher signal frequencies. To increase the efficiency in the acquisition of AMT data from 10 to 300 Hz, we introduce a modification of the AMT method, called portable audio magnetotellurics (PAMT), that uses a lighter AMT field system and (owing to the disregard of signals at frequencies of less than 10 Hz) shortened data acquisition time. PAMT uses three magnetometers pre-mounted on a rigid frame to measure magnetic fields and steel electrodes to measure electric fields. Field tests proved that the system is stable enough to measure AMT fields in the given frequency range. A PAMT test measurement was carried out on Gotland, Sweden along a 3.5 km profile to study the ground conductivity and to map shallow Silurian marlstone and limestone formations, deeper Silurian, Ordovician and Cambrian sedimentary structures and crystalline basement. RMT data collected along a coincident profile and regional airborne very low frequency (VLF) data support the interpretation of our PAMT data. While only the RMT and VLF data constrain a shallow ( 20-50 m deep) transition between Silurian conductive (< 30 Ωm resistivity) marlstone and resistive (> 1000 Ωm resistivity) limestone, the single-method inversion models of both the PAMT and the RMT data show a transition into a conductive layer of 3 to 30 Ωm resistivity at 80 m depth suggesting the compatibility of the two data sets. This conductive layer is interpreted as saltwater saturated succession of Silurian, Ordovician and Cambrian sedimentary units. Towards the lower boundary of this succession (at 600 m depth according to boreholes), only the PAMT data constrain the structure. As supported by modelling tests and sensitivity analysis, the PAMT data only contain a vague indication of the underlying crystalline basement. A PAMT and RMT joint inversion model reveals all the aforementioned units including the less than 80 m deep limestone and marlstone formations and the conductive sedimentary succession of Silurian, Ordovician and Cambrian units. Our test measurements have proven the PAMT modification to be time saving and easy to set up. However, PAMT data suffer from the same noise disturbances as regular AMT data. Since man-made EM noise can propagate over great distances through resistive underground, PAMT measurements are recommended to be carried out in areas with low resistivity. The PAMT method is proven to be applicable in shallow depth studies, especially in areas where normal AMT measurements are inconvenient and/or too expensive to carry out.

Seismicity, shear failure and modes of deformation in deep subduction zones

NASA Technical Reports Server (NTRS)

Lundgren, Paul R.; Giardini, Domenico

1992-01-01

The joint hypocentral determination method is used to relocate deep seismicity reported in the International Seismological Center catalog for earthquakes deeper than 400 km in the Honshu, Bonin, Mariannas, Java, Banda, and South America subduction zones. Each deep seismic zone is found to display planar features of seismicity parallel to the Harvard centroid-moment tensor nodal planes, which are identified as planes of shear failure. The sense of displacement on these planes is one of resistance to deeper penetration.

High aspect ratio nano-fabrication of photonic crystal structures on glass wafers using chrome as hard mask.

PubMed

Hossain, Md Nazmul; Justice, John; Lovera, Pierre; McCarthy, Brendan; O'Riordan, Alan; Corbett, Brian

2014-09-05

Wafer-scale nano-fabrication of silicon nitride (Si x N y ) photonic crystal (PhC) structures on glass (quartz) substrates is demonstrated using a thin (30 nm) chromium (Cr) layer as the hard mask for transferring the electron beam lithography (EBL) defined resist patterns. The use of the thin Cr layer not only solves the charging effect during the EBL on the insulating substrate, but also facilitates high aspect ratio PhCs by acting as a hard mask while deep etching into the Si x N y . A very high aspect ratio of 10:1 on a 60 nm wide grating structure has been achieved while preserving the quality of the flat top of the narrow lines. The presented nano-fabrication method provides PhC structures necessary for a high quality optical response. Finally, we fabricated a refractive index based PhC sensor which shows a sensitivity of 185 nm per RIU.

How Stressful Is "Deep Bubbling"?

PubMed

Tyrmi, Jaana; Laukkanen, Anne-Maria

2017-03-01

Water resistance therapy by phonating through a tube into the water is used to treat dysphonia. Deep submersion (≥10 cm in water, "deep bubbling") is used for hypofunctional voice disorders. Using it with caution is recommended to avoid vocal overloading. This experimental study aimed to investigate how strenuous "deep bubbling" is. Fourteen subjects, half of them with voice training, repeated the syllable [pa:] in comfortable speaking pitch and loudness, loudly, and in strained voice. Thereafter, they phonated a vowel-like sound both in comfortable loudness and loudly into a glass resonance tube immersed 10 cm into the water. Oral pressure, contact quotient (CQ, calculated from electroglottographic signal), and sound pressure level were studied. The peak oral pressure P(oral) during [p] and shuttering of the outer end of the tube was measured to estimate the subglottic pressure P(sub) and the mean P(oral) during vowel portions to enable calculation of transglottic pressure P(trans). Sensations during phonation were reported with an open-ended interview. P(sub) and P(oral) were higher in "deep bubbling" and P(trans) lower than in loud syllable phonation, but the CQ did not differ significantly. Similar results were obtained for the comparison between loud "deep bubbling" and strained phonation, although P(sub) did not differ significantly. Most of the subjects reported "deep bubbling" to be stressful only for respiratory and lip muscles. No big differences were found between trained and untrained subjects. The CQ values suggest that "deep bubbling" may increase vocal fold loading. Further studies should address impact stress during water resistance exercises. Copyright © 2017 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

Structural reliability assessment of the Oman India Pipeline

DOE Office of Scientific and Technical Information (OSTI.GOV)

Al-Sharif, A.M.; Preston, R.

1996-12-31

Reliability techniques are increasingly finding application in design. The special design conditions for the deep water sections of the Oman India Pipeline dictate their use since the experience basis for application of standard deterministic techniques is inadequate. The paper discusses the reliability analysis as applied to the Oman India Pipeline, including selection of a collapse model, characterization of the variability in the parameters that affect pipe resistance to collapse, and implementation of first and second order reliability analyses to assess the probability of pipe failure. The reliability analysis results are used as the basis for establishing the pipe wall thicknessmore » requirements for the pipeline.« less

Improved 2-D resistivity imaging of features in covered karst terrain with arrays of implanted electrodes

NASA Astrophysics Data System (ADS)

Kiflu, H. G.; Kruse, S. E.; Harro, D.; Loke, M. H.; Wilkinson, P. B.

2013-12-01

Electrical resistivity tomography is commonly used to identify geologic features associated with sinkhole formation. In covered karst terrain, however, it can be difficult to resolve the depth to top of limestone with this method. This is due to the fact that array lengths, and hence depth of resolution, are often limited by residential or commercial lot dimensions in urban environments. Furthermore, the sediments mantling the limestone are often clay-rich and highly conductive. The resistivity method has limited sensitivity to resistive zones beneath conductive zones. This sensitivity can be improved significantly with electrodes implanted at depth in the cover sediments near the top of limestone. An array of deep electrodes is installed with direct push technology in the karst cover. When combined with a surface array in which each surface electrode is underlain by a deep electrode, the array geometry is similar to a borehole array turned on its side. This method, called the Multi-Electrode Resistivity Implant Technique (MERIT), offers the promise of significantly improved resolution of epikarst and cover collapse development zones in the overlying sediment, the limestone or at the sediment-bedrock interface in heterogeneous karst environments. With a non-traditional array design, the question of optimal array geometries arises. Optimizing array geometries is complicated by the fact that many plausible 4-electrode readings will produce negative apparent resistivity values, even in homogeneous terrain. Negative apparent resistivities cannot be used in inversions based on the logarithm of the apparent resistivity. New algorithms for seeking optimal array geometries have been developed by modifying the 'Compare R' method of Wilkinson and Loke. The optimized arrays show significantly improved resolution over basic arrays adapted from traditional 2D surface geometries. Several MERIT case study surveys have been conducted in covered karst in west-central Florida, with 28-electrode arrays with electrodes 2-5 meters apart, and the deep arrays buried at 4-8 meters depth. Ground penetrating radar surveys, SPT borings and coring data provide selected 'ground truthing'. The case studies show that inclusion of the deep electrode array permits karst features such as undulations at the top of limestone and raveling zones within surficial sediments to be imaged. These features are not accessible from surface arrays with equivalent surface footprints. The method also has better resolution at depth at the ends of the lines, where surface arrays are typically plotted with a trapezoidal truncation due to poor resolution at the lower corners of the profile.

Magnetotelluric evidence for a deep-crustal mineralizing system beneath the Olympic Dam iron oxide copper-gold deposit, southern Australia

NASA Astrophysics Data System (ADS)

Heinson, Graham S.; Direen, Nicholas G.; Gill, Rob M.

2006-07-01

The iron oxide copper-gold Olympic Dam deposit, situated along the margin of the Proterozoic Gawler craton, South Australia, is the world's largest uranium deposit and sixth-largest copper deposit; it also contains significant reserves of gold, silver, and rare earth elements. Gaining a better understanding of the mechanisms for genesis of the economic liberalization is fundamental for defining exploration models in similar crustal settings. To delineate crustal structures that may constrain mineral system fluid pathways, coincident deep crustal seismic and magnetotelluric (MT) transects were obtained along a 220 km section that crosses Olympic Dam and the major crustal boundaries. In this paper we present results from 58 long-period (10 104 s) MT sites, with site spacing of 5 10 km. A two-dimensional inversion of MT data from 33 sites to a depth of 100 km shows four notable features: (1) sedimentary cover sequences with low resistivity (<20 Ω·m) thicken to 10 km toward the northern cover sequences of the Adelaide Rift Complex; (2) a northeast-dipping crustal boundary separates a highly resistive (>1000 Ω·m) Archean crustal core from a more conductive crust and mantle to the north (typically <500 Ω·m); (3) to the north of Olympic Dam, the upper-middle crust to ˜20 km is quite resistive (˜1000 Ω·m), but the lower crust is much more conductive (<100 Ω·m); and (4) beneath Olympic Dam, we image a low-resistivity region (<100 Ω·m) throughout the crust, coincident with a seismically transparent region. We argue that the cause of the low-resistivity and low-reflectivity region beneath Olympic Dam may be due to the upward movement of CO2-bearing volatiles near the time of deposit formation that precipitated conductive graphite liberalization along grain boundaries, simultaneously annihilating acoustic impedance boundaries. The source of the volatiles may be from the mantle degassing or retrograde metamorphism of the lower crust associated with Proterozoic crustal deformation.

Sutures and an Anomalous Deep Lithospheric Electrical Resistor in the Southeastern United States as Revealed by EarthScope Magnetotelluric Data

NASA Astrophysics Data System (ADS)

Murphy, B. S.; Egbert, G. D.

2016-12-01

We use newly acquired long-period magnetotelluric data to examine lithospheric structure beneath the modern Southern Appalachian Mountains and the adjacent Piedmont. The New York-Alabama Lineament is clearly visible both in inverse models and in the data themselves as a major Appalachian-parallel, mid- to lower-crustal conductive feature. This observation supports geologically-based interpretations of the NY-AL Lineament as a major Grenville suture. We also discern several other suture zones in our inverse models, including the Central Piedmont Suture. Interestingly, we do not observe any geoelectric signature of the Suwannee Suture. Most strikingly, we find a zone of exceptionally high resistivity (>1000 μm) that extends to a depth of more than 200 km beneath the modern Piedmont. This resistive block abuts more conductive lithosphere ( 100 μm, as would be expected for Phanerozoic lithosphere) to the northwest. The boundary between these two distinct domains coincides with the modern Appalachian topographic escarpment to within our resolution. The high resistivity values would seem to require completely dry, highly depleted lithosphere at anomalously cold temperatures; however, corresponding seismically fast lithospheric mantle that would be expected for such a structure has not been observed in any previous studies. The exact nature of this feature therefore remains uncertain at present. Regardless, as it is a persistent feature in inversions and it is also readily apparent in the impedance data, this geoelectric structure likely holds important implications for the past, present, and future tectonic evolution of the Southeastern United States.

Highly Sensitive Detection of Isoniazid Heteroresistance in Mycobacterium tuberculosis by DeepMelt Assay.

PubMed

Liang, Bin; Tan, Yaoju; Li, Zi; Tian, Xueshan; Du, Chen; Li, Hui; Li, Guoli; Yao, Xiangyang; Wang, Zhongan; Xu, Ye; Li, Qingge

2018-02-01

Detection of heteroresistance of Mycobacterium tuberculosis remains challenging using current genotypic drug susceptibility testing methods. Here, we described a melting curve analysis-based approach, termed DeepMelt, that can detect less-abundant mutants through selective clamping of the wild type in mixed populations. The singleplex DeepMelt assay detected 0.01% katG S315T in 10 5 M. tuberculosis genomes/μl. The multiplex DeepMelt TB/INH detected 1% of mutant species in the four loci associated with isoniazid resistance in 10 4 M. tuberculosis genomes/μl. The DeepMelt TB/INH assay was tested on a panel of DNA extracted from 602 precharacterized clinical isolates. Using the 1% proportion method as the gold standard, the sensitivity was found to be increased from 93.6% (176/188, 95% confidence interval [CI] = 89.2 to 96.3%) to 95.7% (180/188, 95% CI = 91.8 to 97.8%) compared to the MeltPro TB/INH assay. Further evaluation of 109 smear-positive sputum specimens increased the sensitivity from 83.3% (20/24, 95% CI = 64.2 to 93.3%) to 91.7% (22/24, 95% CI = 74.2 to 97.7%). In both cases, the specificity remained nearly unchanged. All heteroresistant samples newly identified by the DeepMelt TB/INH assay were confirmed by DNA sequencing and even partially by digital PCR. The DeepMelt assay may fill the gap between current genotypic and phenotypic drug susceptibility testing for detecting drug-resistant tuberculosis patients. Copyright © 2018 American Society for Microbiology.

Deep-levels in gallium arsenide for device applications

NASA Astrophysics Data System (ADS)

McManis, Joseph Edward

Defects in semiconductors have been studied for over 40 years as a diagnostic of the quality of crystal growth. In this thesis, we investigate GaAs deep-levels specifically intended for devices. This thesis summarizes our efforts to characterize the near-infrared photoluminescence from deep-levels, study optical transitions via absorption, and fabricate and characterize deep-level light-emitting diodes (LEDs). This thesis also describes the first tunnel diodes which explicitly make use of GaAs deep-levels. Photoluminescence measurements of GaAs deep-levels showed a broad peak around a wavelength extending from 1.0--1.7 mum, which includes important wavelengths for fiber-optic communications (1.3--1.55 mum). Transmission measurements show the new result that very little of the radiative emission is self-absorbed. We measured the deep-level photoluminescence at several temperatures. We are also the first to report the internal quantum efficiency associated with the deep-level transitions. We have fabricated LEDs that, utilize the optical transitions of GaAs deep-levels. The electroluminescence spectra showed a broad peak from 1.0--1.7 mum at low currents, but the spectrum exhibited a blue-shift as the current was increased. To improve device performance, we designed an AlGaAs layer into the structure of the LEDs. The AlGaAs barrier layer acts as a resistive barrier so that the holes in the p-GaAs layer are swept away from underneath the gold p-contact. The AlGaAs layer also reduces the blue-shift by acting as a potential barrier so that only higher-energy holes are injected. We found that the LEDs with AlGaAs were brighter at long wavelengths, which was a significant improvement. Photoluminescence measurements show that the spectral blue-shift is not due to sample heating. We have developed a new physical model to explain the blue-shift: it is caused by Coloumb charging of the deep-centers. We have achieved the first tunnel diodes with which specifically utilize deep-levels in low-temperature-grown (LTG) GaAs. Our devices show the largest ever peak current density in a GaAs tunnel diode at room temperature. Our devices also show significant room-temperature peak-to-valley current ratios. The shape of the current-voltage characteristic and the properties of the optical emission enable us to determine the peak and valley transport mechanisms.

Identification of ribonucleotide reductase mutation causing temperature-sensitivity of herpes simplex virus isolates from whitlow by deep sequencing.

PubMed

Daikoku, Tohru; Oyama, Yukari; Yajima, Misako; Sekizuka, Tsuyoshi; Kuroda, Makoto; Shimada, Yuka; Takehara, Kazuhiko; Miwa, Naoko; Okuda, Tomoko; Sata, Tetsutaro; Shiraki, Kimiyasu

2015-06-01

Herpes simplex virus 2 caused a genital ulcer, and a secondary herpetic whitlow appeared during acyclovir therapy. The secondary and recurrent whitlow isolates were acyclovir-resistant and temperature-sensitive in contrast to a genital isolate. We identified the ribonucleotide reductase mutation responsible for temperature-sensitivity by deep-sequencing analysis.

Seeing Deep Structure from the Interactions of Surface Features

ERIC Educational Resources Information Center

Chi, Michelene T. H.; VanLehn, Kurt A.

2012-01-01

Transfer is typically thought of as requiring individuals to "see" what is the same in the deep structure between a new target problem and a previously encountered source problem, even though the surface features may be dissimilar. We propose that experts can "see" the deep structure by considering the first-order interactions…

A Template-Based Protein Structure Reconstruction Method Using Deep Autoencoder Learning.

PubMed

Li, Haiou; Lyu, Qiang; Cheng, Jianlin

2016-12-01

Protein structure prediction is an important problem in computational biology, and is widely applied to various biomedical problems such as protein function study, protein design, and drug design. In this work, we developed a novel deep learning approach based on a deeply stacked denoising autoencoder for protein structure reconstruction. We applied our approach to a template-based protein structure prediction using only the 3D structural coordinates of homologous template proteins as input. The templates were identified for a target protein by a PSI-BLAST search. 3DRobot (a program that automatically generates diverse and well-packed protein structure decoys) was used to generate initial decoy models for the target from the templates. A stacked denoising autoencoder was trained on the decoys to obtain a deep learning model for the target protein. The trained deep model was then used to reconstruct the final structural model for the target sequence. With target proteins that have highly similar template proteins as benchmarks, the GDT-TS score of the predicted structures is greater than 0.7, suggesting that the deep autoencoder is a promising method for protein structure reconstruction.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ritchie, IAltenberger, RKNalla, YSano LWagner, RO

The effect of surface treatment on the stress/life fatigue behavior of a titanium Ti-6Al-4V turbine fan blade alloy is investigated in the regime of 102 to 106 cycles to failure under fully reversed stress-controlled isothermal push-pull loading between 25? and 550?C at a frequency of 5 Hz. Specifically, the fatigue behavior was examined in specimens in the deep-rolled and laser-shock peened surface conditions, and compared to results on samples in the untreated (machined and stress annealed) condition. Although the fatigue resistance of the Ti-6Al-4V alloy declined with increasing test temperature regardless of surface condition, deep-rolling and laser-shock peening surface treatmentsmore » were found to extend the fatigue lives by factors of more than 30 and 5-10, respectively, in the high-cycle and low-cycle fatigue regimes at temperatures as high as 550?C. At these temperatures, compressive residual stresses are essentially relaxed; however, it is the presence of near-surface work hardened layers, with a nanocystalline structure in the case of deep-rolling and dense dislocation tangles in the case of laser-shock peening, which remain fairly stable even after cycling at 450?-550?C, that provide the basis for the beneficial role of mechanical surface treatments on the fatigue strength of Ti-6Al-4V at elevated temperatures.« less

Alternating SiCl4/O2 passivation steps with SF6 etch steps for silicon deep etching

NASA Astrophysics Data System (ADS)

Duluard, C. Y.; Ranson, P.; Pichon, L. E.; Pereira, J.; Oubensaid, E. H.; Lefaucheux, P.; Puech, M.; Dussart, R.

2011-06-01

Deep etching of silicon has been investigated in an inductively coupled plasma etch reactor using short SiCl4/O2 plasma steps to passivate the sidewalls of the etched structures. A study was first carried out to define the appropriate parameters to create, at a substrate temperature of -20 °C, a passivation layer by SiCl4/O2 plasma that resists lateral chemical etching in SF6 plasma. The most efficient passivation layer was obtained for a SiCl4/O2 gas flow ratio of 2:1, a pressure of 1 Pa and a source power of 1000 W. Ex situ analyses on a film deposited with these parameters show that it is very rich in oxygen. Silicon etching processes that alternate SF6 plasma etch steps with SiCl4/O2 plasma passivation steps were then developed. Preliminary tests in pulsed-mode conditions have enabled etch rates greater than 2 µm min-1 with selectivities higher than 220. These results show that it is possible to develop a silicon deep etching process at substrate temperatures around -20 °C that uses low SiCl4 and O2 gas flows instead of conventional fluorocarbon gases for sidewall protection.

Effects of neuromuscular joint facilitation on bridging exercises with respect to deep muscle changes.

PubMed

Zhou, Bin; Huang, QiuChen; Zheng, Tao; Huo, Ming; Maruyama, Hitoshi

2015-05-01

[Purpose] This study examined the effects of neuromuscular joint facilitation on bridging exercises by assessing the cross-sectional area of the multifidus muscle and thickness of the musculus transversus abdominis. [Subjects] Twelve healthy men. [Methods] Four exercises were evaluated: (a) supine resting, (b) bridging resistance exercise involving posterior pelvic tilting, (c) bridging resistance exercise involving anterior pelvic tilting, and (d) bridging resistance exercise involving neuromuscular joint facilitation. The cross-sectional area of the multifidus muscle and thickness of the musculus transversus abdominis were measured during each exercise. [Results] The cross-sectional area of the multifidus muscle and thickness of the musculus transversus abdominis were significantly greater in the neuromuscular joint facilitation group than the others. [Conclusion] Neuromuscular joint facilitation intervention improves the function of deep muscles such as the multifidus muscle and musculus transversus abdominis. Therefore, it can be recommended for application in clinical treatments such as that for back pain.

Hall effect analysis in irradiated silicon samples with different resistivities

NASA Astrophysics Data System (ADS)

Borchi, E.; Bruzzi, M.; Dezillie, B.; Lazanu, S.; Li, Z.; Pirollo, S.

1999-08-01

The changes induced by neutron irradiation in n- and p-type silicon samples with starting resistivities from 10 /spl Omega/-cm up to 30 k/spl Omega/-cm, grown using different techniques, as float-zone (FZ), Czochralski (CZ) and epitaxial, have been analyzed by Van der Pauw and Hall effect measurements. Increasing the fluence, each set of samples evolves toward a quasi-intrinsic p-type material. This behavior has been explained in the frame of a two-level model, that considers the introduction during irradiation of mainly two defects. A deep acceptor and a deep donor, probably related to the divacancy and to the C/sub i/O/sub i/ complex, are placed in the upper and lower half of the forbidden gap, respectively. This simple model explains quantitatively the data on resistivity and Hall coefficient of each set of samples up to the fluence of /spl ap/10/sup 14/ n/cm/sup 2/.

Response simulation and theoretical calibration of a dual-induction resistivity LWD tool

NASA Astrophysics Data System (ADS)

Xu, Wei; Ke, Shi-Zhen; Li, An-Zong; Chen, Peng; Zhu, Jun; Zhang, Wei

2014-03-01

In this paper, responses of a new dual-induction resistivity logging-while-drilling (LWD) tool in 3D inhomogeneous formation models are simulated by the vector finite element method (VFEM), the influences of the borehole, invaded zone, surrounding strata, and tool eccentricity are analyzed, and calibration loop parameters and calibration coefficients of the LWD tool are discussed. The results show that the tool has a greater depth of investigation than that of the existing electromagnetic propagation LWD tools and is more sensitive to azimuthal conductivity. Both deep and medium induction responses have linear relationships with the formation conductivity, considering optimal calibration loop parameters and calibration coefficients. Due to the different depths of investigation and resolution, deep induction and medium induction are affected differently by the formation model parameters, thereby having different correction factors. The simulation results can provide theoretical references for the research and interpretation of the dual-induction resistivity LWD tools.

Radiation damage and defect behavior in ion-implanted, lithium counterdoped silicon solar cells

NASA Technical Reports Server (NTRS)

Weinberg, I.; Mehta, S.; Swartz, C. K.

1984-01-01

Boron doped silicon n+p solar cells were counterdoped with lithium by ion implantation and the resuitant n+p cells irradiated by 1 MeV electrons. The function of fluence and a Deep Level Transient Spectroscopy (DLTS) was studied to correlate defect behavior with cell performance. It was found that the lithium counterdoped cells exhibited significantly increased radiation resistance when compared to boron doped control cells. It is concluded that the annealing behavior is controlled by dissociation and recombination of defects. The DLTS studies show that counterdoping with lithium eliminates at least three deep level defects and results in three new defects. It is speculated that the increased radiation resistance of the counterdoped cells is due primarily to the interaction of lithium with oxygen, single vacanies and divacancies and that the lithium-oxygen interaction is the most effective in contributing to the increased radiation resistance.

Radiation damage and defect behavior in ion-implanted, lithium counterdoped silicon solar cells

NASA Technical Reports Server (NTRS)

Weinberg, I.; Mehta, S.; Swartz, C. K.

1984-01-01

Boron doped silicon n+p solar cells were counterdoped with lithium by ion implanation and the resultant n+p cells irradiated by 1 MeV electrons. The function of fluence and a Deep Level Transient Spectroscopy (DLTS) was studied to correlate defect behavior with cell performance. It was found that the lithium counterdoped cells exhibited significantly increased radiation resistance when compared to boron doped control cells. It is concluded that the annealing behavior is controlled by dissociation and recombination of defects. The DLTS studies show that counterdoping with lithium eliminates at least three deep level defects and results in three new defects. It is speculated that the increased radiation resistance of the counterdoped cells is due primarily to the interaction of lithium with oxygen, single vacancies and divacancies and that the lithium-oxygen interaction is the most effective in contributing to the increased radiation resistance.

Development and Application of Wide Bandwidth Magneto-Resistive Sensor Based Eddy Current Probe

NASA Technical Reports Server (NTRS)

Wincheski, Russell A.; Simpson, John

2010-01-01

The integration of magneto-resistive sensors into eddy current probes can significantly expand the capabilities of conventional eddy current nondestructive evaluation techniques. The room temperature solid-state sensors have typical bandwidths in the megahertz range and resolutions of tens of microgauss. The low frequency sensitivity of magneto-resistive sensors has been capitalized upon in previous research to fabricate very low frequency eddy current sensors for deep flaw detection in multilayer conductors. In this work a modified probe design is presented to expand the capabilities of the device. The new probe design incorporates a dual induction source enabling operation from low frequency deep flaw detection to high frequency high resolution near surface material characterization. Applications of the probe for the detection of localized near surface conductivity anomalies are presented. Finite element modeling of the probe is shown to be in good agreement with experimental measurements.

Interpretation of deep directional resistivity measurements acquired in high-angle and horizontal wells using 3-D inversion

NASA Astrophysics Data System (ADS)

Puzyrev, Vladimir; Torres-Verdín, Carlos; Calo, Victor

2018-05-01

The interpretation of resistivity measurements acquired in high-angle and horizontal wells is a critical technical problem in formation evaluation. We develop an efficient parallel 3-D inversion method to estimate the spatial distribution of electrical resistivity in the neighbourhood of a well from deep directional electromagnetic induction measurements. The methodology places no restriction on the spatial distribution of the electrical resistivity around arbitrary well trajectories. The fast forward modelling of triaxial induction measurements performed with multiple transmitter-receiver configurations employs a parallel direct solver. The inversion uses a pre-conditioned gradient-based method whose accuracy is improved using the Wolfe conditions to estimate optimal step lengths at each iteration. The large transmitter-receiver offsets, used in the latest generation of commercial directional resistivity tools, improve the depth of investigation to over 30 m from the wellbore. Several challenging synthetic examples confirm the feasibility of the full 3-D inversion-based interpretations for these distances, hence enabling the integration of resistivity measurements with seismic amplitude data to improve the forecast of the petrophysical and fluid properties. Employing parallel direct solvers for the triaxial induction problems allows for large reductions in computational effort, thereby opening the possibility to invert multiposition 3-D data in practical CPU times.

Geophysical constraints on Rio Grande rift structure and stratigraphy from magnetotelluric models and borehole resistivity logs, northern New Mexico

USGS Publications Warehouse

Rodriguez, Brian D.; Sawyer, David A.; Hudson, Mark R.; Grauch, V.J.S.

2013-01-01

Two- and three-dimensional electrical resistivity models derived from the magnetotelluric method were interpreted to provide more accurate hydrogeologic parameters for the Albuquerque and Española Basins. Analysis and interpretation of the resistivity models are aided by regional borehole resistivity data. Examination of the magnetotelluric response of hypothetical stratigraphic cases using resistivity characterizations from the borehole data elucidates two scenarios where the magnetotelluric method provides the strongest constraints. In the first scenario, the magnetotelluric method constrains the thickness of extensive volcanic cover, the underlying thickness of coarser-grained facies of buried Santa Fe Group sediments, and the depth to Precambrian basement or overlying Pennsylvanian limestones. In the second scenario, in the absence of volcanic cover, the magnetotelluric method constrains the thickness of coarser-grained facies of buried Santa Fe Group sediments and the depth to Precambrian basement or overlying Pennsylvanian limestones. Magnetotelluric surveys provide additional constraints on the relative positions of basement rocks and the thicknesses of Paleozoic, Mesozoic, and Tertiary sedimentary rocks in the region of the Albuquerque and Española Basins. The northern extent of a basement high beneath the Cerros del Rio volcanic field is delineated. Our results also reveal that the largest offset of the Hubbell Spring fault zone is located 5 km west of the exposed scarp. By correlating our resistivity models with surface geology and the deeper stratigraphic horizons using deep well log data, we are able to identify which of the resistivity variations in the upper 2 km belong to the upper Santa Fe Group sediment

Geophysical investigation of sentinel lakes in Lake, Seminole, Orange, and Volusia Counties, Florida

USGS Publications Warehouse

Reich, Christopher; Flocks, James; Davis, Jeffrey

2012-01-01

This study was initiated in cooperation with the St. Johns River Water Management District (SJRWMD) to investigate groundwater and surface-water interaction in designated sentinel lakes in central Florida. Sentinel lakes are a SJRWMD established set of priority water bodies (lakes) for which minimum flows and levels (MFLs) are determined. Understanding both the structure and lithology beneath these lakes can ultimately lead to a better understanding of the MFLs and why water levels fluctuate in certain lakes more so than in other lakes. These sentinel lakes have become important water bodies to use as water-fluctuation indicators in the SJRWMD Minimum Flows and Levels program and will be used to define long-term hydrologic and ecologic performance measures. Geologic control on lake hydrology remains poorly understood in this study area. Therefore, the U.S. Geological Survey investigated 16 of the 21 water bodies on the SJRWMD priority list. Geologic information was obtained by the tandem use of high-resolution seismic profiling (HRSP) and direct-current (DC) resistivity profiling to isolate both the geologic framework (structure) and composition (lithology). Previous HRSP surveys from various lakes in the study area have been successful in identifying karst features, such as subsidence sinkholes. However, by using this method only, it is difficult to image highly irregular or chaotic surfaces, such as collapse sinkholes. Resistivity profiling was used to complement HRSP by detecting porosity change within fractured or collapsed structures and increase the ability to fully characterize the subsurface. Lake Saunders (Lake County) is an example of a lake composed of a series of north-south-trending sinkholes that have joined to form one lake body. HRSP shows surface depressions and deformation in the substrate. Resistivity data likewise show areas in the southern part of the lake where resistivity shifts abruptly from approximately 400 ohm meters (ohm-m) along the edges to approximately 12 ohm-m in the center. These well-defined areas may indicate a "ravel" zone of increased porosity or clay content. Within Lake Helen (Volusia County), a parallel set of seismic reflectors within a host of chaotic reflectors may represent fill within a large sinkhole. The feature extends to more than 50 meters (m) deep and contains very steep pinnacles within the center. Seismic data in Lake Helen are supported by high resistivity values from adjacent continuous resistivity profiles that show possible center collapse within the lake and infilling of sandy material. When used together, HRSP and DC resistivity techniques provide a composite image of structure and lithology to detect potential conduits for fluid flow.

A 3D Resistivity Model of the Pyramid of La Luna (Teotihuacan, Mexico) Subsoil by Employing Non-Conventional ERT Arrays

NASA Astrophysics Data System (ADS)

Chavez, R. E.; Tejero, A.; Cifuentes, G.; Garcia-Serrano, A.; Argote-Espino, D. L.; HernaNdez-Quintero, J. E.; Ortega, V.

2017-12-01

The Pyramid of La Luna is found within the archaeological site of Teotihuacan, located to the NE of Mexico City. This pre-Hispanic city was developed between 250 AD and 450 AD, with a population of 100,000 people. The most important edifices are the pyramids of El Sol and La Luna. The pyramid of El Sol is one of the largest pre-Hispanic structures found nowadays in Mexico (a square basement of approximately 200m X 225 m). The pyramid of La Luna (with a base of 140m X 150m), smaller in size is located towards the northern portion of this ancient city. At its front, a big plaza is found surrounded by pyramids of different ages. Previous archaeological studies carried out within the plaza, discovered small shallow pipes for water discharge. Then, it is possible to find deeper structures within the Square. A geophysical work was carried out in the Plaza of La Luna employing the ERT-3D to build a 3D resistivity model. Four ERT profiles were deployed in the area in the E-W direction, with a length of 80 m each; electrodes were inserted 3 m apart. A roll-along technique was employed to obtain a 3D view of the plaza subsoil. Gradient (G), Equatorial (Eq), and Minimum Coupling (MC) arrays were applied. A total of 2,600 apparent resistivity observations were acquired. Also, the pyramid was surrounded with 105 electrodes to illuminate this structure subsoil, employing the 'L' and 'Corner' arrays and the already mentioned settings. Electrodes were separated 5 m for the E and N sides, and 6 m for the W and S sides, topographic correction was added to the interpretation. 7,200 apparent resistivity values were obtained. Processing of the data included noise filtering, real electrode position and removing of spikes. Finally, the data were inverted to compute a 3D resistivity distribution of the subsoil. Preliminary results obtained indicate the presence of high resistivity anomalies probably associated to infill or archaeological features. However, an interesting resistivity signature was determined at 8m deep, which possesses a SW-NE direction and apparently ends beneath the NE portion of the Pyramid of La Luna. Beneath the pyramid's center, the resistivity model interpreted depicts an important resistivity anomaly (about 350 Ohm-m and 10 m in diameter), which may indicate the presence of a cavity(?).

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ross, Howard P.; Moore, Joseph N.; Christensen, Odin D.

Geological, geochemical and geophysical data are presented for one of the major geothermal systems in the western United States. Regional data indicate major tectonic structures which are still active and provide the conduits for the geothermal system. Detailed geologic mapping has defined major glide blocks of Tertiary volcanics which moved down from the Tushar Mountains and locally act as a leaky cap to portions of the presently known geothermal system. Mapping and geochemical studies indicate three periods of mineralization have affected the area, two of which are unrelated to the present geothermal activity. The geologic relationships demonstrate that the majormore » structures have been opened repeatedly since the Tertiary. Gravity and magnetic data are useful in defining major structures beneath alluvium and basalt cover, and indicate the importance of the Cove Fort-Beaver graben and the Cove Creek fault in localizing the geothermal reservoir. These structures and a high level of microearthquake activity also suggest other target areas within the larger thermal anomaly. Electrical resistivity surveys and thermal gradient holes both contribute to the delineation of the known reservoir. Deep exploration wells which test the reservoir recorded maximum temperatures of 178 C and almost isothermal behavior beginning at 700 to 1000 m and continuing to a depth of 1800 m. Costly drilling, high corrosion rates and low reservoir pressure coupled with the relatively low reservoir temperatures have led to the conclusion that the reservoir is not economic for electric power production at present. Plans are underway to utilize the moderate-temperature fluids for agribusiness, and exploration continues for a deep high-temperature reservoir.« less

A high performance pMOSFET with two-step recessed SiGe-S/D structure for 32 nm node and beyond

NASA Astrophysics Data System (ADS)

Yasutake, Nobuaki; Azuma, Atsushi; Ishida, Tatsuya; Ohuchi, Kazuya; Aoki, Nobutoshi; Kusunoki, Naoki; Mori, Shinji; Mizushima, Ichiro; Morooka, Tetsu; Kawanaka, Shigeru; Toyoshima, Yoshiaki

2007-11-01

A novel SiGe-S/D structure for high performance pMOSFET called two-step recessed SiGe-source/drain (S/D) is developed with careful optimization of recessed SiGe-S/D structure. With this method, hole mobility, short channel effect and S/D resistance in pMOSFET are improved compared with conventional recessed SiGe-S/D structure. To enhance device performance such as drain current drivability, SiGe region has to be closer to channel region. Then, conventional deep SiGe-S/D region with carefully optimized shallow SiGe SDE region showed additional device performance improvement without SCE degradation. As a result, high performance 24 nm gate length pMOSFET was demonstrated with drive current of 451 μA/μm at ∣ Vdd∣ of 0.9 V and Ioff of 100 nA/μm (552 μA/μm at ∣ Vdd∣ of 1.0 V). Furthermore, by combining with Vdd scaling, we indicate the extendability of two-step recessed SiGe-S/D structure down to 15 nm node generation.

Stretched-to-compressed-exponential crossover observed in the electrical degradation kinetics of some spinel-metallic screen-printed structures

NASA Astrophysics Data System (ADS)

Balitska, V.; Shpotyuk, O.; Brunner, M.; Hadzaman, I.

2018-02-01

Thermally-induced (170 °C) degradation-relaxation kinetics is examined in screen-printed structures composed of spinel Cu0.1Ni0.1Co1.6Mn1.2O4 ceramics with conductive Ag or Ag-Pd layered electrodes. Structural inhomogeneities due to Ag and Ag-Pd diffusants in spinel phase environment play a decisive role in non-exponential kinetics of negative relative resistance drift. If Ag migration in spinel is inhibited by Pd addition due to Ag-Pd alloy, the kinetics attains stretched exponential behavior with ∼0.58 exponent, typical for one-stage diffusion in structurally-dispersive media. Under deep Ag penetration into spinel ceramics, as for thick films with Ag-layered electrodes, the degradation kinetics drastically changes, attaining features of two-step diffusing process governed by compressed-exponential dependence with power index of ∼1.68. Crossover from stretched- to compressed-exponential kinetics in spinel-metallic structures is mapped on free energy landscape of non-barrier multi-well system under strong perturbation from equilibrium, showing transition with a character downhill scenario resulting in faster than exponential decaying.

Insights into the Enhanced in vivo Fitness of Neisseria gonorrhoeae Driven by a Fluoroquinolone Resistance-Conferring Mutant DNA Gyrase

DTIC Science & Technology

2015-02-05

enhancement in fitness relative to its parent strain was also more resistant to human and bacterial antimicrobial peptides , including the cathelicidins...32 Deep sequencing data analysis.............................................................................. 33 Antimicrobial peptide ...Sensitivity to cationic antimicrobial peptides ....................................................... 57 In vivo competitive infection in wild-type and

Characterization and growth of epitaxial layers of Gs exhibiting high resistivity for ionic implantation

NASA Technical Reports Server (NTRS)

1979-01-01

Either classical or low temperature epitaxial growth techniques can be used to control the deposition of buffer layers of GaAs on semiconducting substrates and to obtain the resistivity and purity desired. Techniques developed to study, as a function of thickness, the evolution of mobilities by photoHall, and the spectroscopy of shallow and deep centers by cathodoluminescence and current transients reveal one very pure layer of medium resistivity and high mobility, and another "dead layer" of elevated resistivity far from the surface. The highly resistive layer remains pure over several microns, which appears interesting for implantation.

Surface and deep structures in graphics comprehension.

PubMed

Schnotz, Wolfgang; Baadte, Christiane

2015-05-01

Comprehension of graphics can be considered as a process of schema-mediated structure mapping from external graphics on internal mental models. Two experiments were conducted to test the hypothesis that graphics possess a perceptible surface structure as well as a semantic deep structure both of which affect mental model construction. The same content was presented to different groups of learners by graphics from different perspectives with different surface structures but the same deep structure. Deep structures were complementary: major features of the learning content in one experiment became minor features in the other experiment, and vice versa. Text was held constant. Participants were asked to read, understand, and memorize the learning material. Furthermore, they were either instructed to process the material from the perspective supported by the graphic or from an alternative perspective, or they received no further instruction. After learning, they were asked to recall the learning content from different perspectives by completing graphs of different formats as accurately as possible. Learners' recall was more accurate if the format of recall was the same as the learning format which indicates surface structure influences. However, participants also showed more accurate recall when they remembered the content from a perspective emphasizing the deep structure, regardless of the graphics format presented before. This included better recall of what they had not seen than of what they really had seen before. That is, deep structure effects overrode surface effects. Depending on context conditions, stimulation of additional cognitive processing by instruction had partially positive and partially negative effects.

Nonvolatile Memory Materials for Neuromorphic Intelligent Machines.

PubMed

Jeong, Doo Seok; Hwang, Cheol Seong

2018-04-18

Recent progress in deep learning extends the capability of artificial intelligence to various practical tasks, making the deep neural network (DNN) an extremely versatile hypothesis. While such DNN is virtually built on contemporary data centers of the von Neumann architecture, physical (in part) DNN of non-von Neumann architecture, also known as neuromorphic computing, can remarkably improve learning and inference efficiency. Particularly, resistance-based nonvolatile random access memory (NVRAM) highlights its handy and efficient application to the multiply-accumulate (MAC) operation in an analog manner. Here, an overview is given of the available types of resistance-based NVRAMs and their technological maturity from the material- and device-points of view. Examples within the strategy are subsequently addressed in comparison with their benchmarks (virtual DNN in deep learning). A spiking neural network (SNN) is another type of neural network that is more biologically plausible than the DNN. The successful incorporation of resistance-based NVRAM in SNN-based neuromorphic computing offers an efficient solution to the MAC operation and spike timing-based learning in nature. This strategy is exemplified from a material perspective. Intelligent machines are categorized according to their architecture and learning type. Also, the functionality and usefulness of NVRAM-based neuromorphic computing are addressed. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Training Deep Convolutional Neural Networks with Resistive Cross-Point Devices

PubMed Central

Gokmen, Tayfun; Onen, Murat; Haensch, Wilfried

2017-01-01

In a previous work we have detailed the requirements for obtaining maximal deep learning performance benefit by implementing fully connected deep neural networks (DNN) in the form of arrays of resistive devices. Here we extend the concept of Resistive Processing Unit (RPU) devices to convolutional neural networks (CNNs). We show how to map the convolutional layers to fully connected RPU arrays such that the parallelism of the hardware can be fully utilized in all three cycles of the backpropagation algorithm. We find that the noise and bound limitations imposed by the analog nature of the computations performed on the arrays significantly affect the training accuracy of the CNNs. Noise and bound management techniques are presented that mitigate these problems without introducing any additional complexity in the analog circuits and that can be addressed by the digital circuits. In addition, we discuss digitally programmable update management and device variability reduction techniques that can be used selectively for some of the layers in a CNN. We show that a combination of all those techniques enables a successful application of the RPU concept for training CNNs. The techniques discussed here are more general and can be applied beyond CNN architectures and therefore enables applicability of the RPU approach to a large class of neural network architectures. PMID:29066942

Training Deep Convolutional Neural Networks with Resistive Cross-Point Devices.

PubMed

Gokmen, Tayfun; Onen, Murat; Haensch, Wilfried

2017-01-01

In a previous work we have detailed the requirements for obtaining maximal deep learning performance benefit by implementing fully connected deep neural networks (DNN) in the form of arrays of resistive devices. Here we extend the concept of Resistive Processing Unit (RPU) devices to convolutional neural networks (CNNs). We show how to map the convolutional layers to fully connected RPU arrays such that the parallelism of the hardware can be fully utilized in all three cycles of the backpropagation algorithm. We find that the noise and bound limitations imposed by the analog nature of the computations performed on the arrays significantly affect the training accuracy of the CNNs. Noise and bound management techniques are presented that mitigate these problems without introducing any additional complexity in the analog circuits and that can be addressed by the digital circuits. In addition, we discuss digitally programmable update management and device variability reduction techniques that can be used selectively for some of the layers in a CNN. We show that a combination of all those techniques enables a successful application of the RPU concept for training CNNs. The techniques discussed here are more general and can be applied beyond CNN architectures and therefore enables applicability of the RPU approach to a large class of neural network architectures.

Studies of a full-scale mechanical prototype line for the ANTARES neutrino telescope and tests of a prototype instrument for deep-sea acoustic measurements

NASA Astrophysics Data System (ADS)

Ageron, M.; Aguilar, J. A.; Albert, A.; Ameli, F.; Anghinolfi, M.; Anton, G.; Anvar, S.; Ardellier-Desages, F.; Aslanides, E.; Aubert, J.-J.; Auer, R.; Barbarito, E.; Basa, S.; Battaglieri, M.; Bazzotti, M.; Becherini, Y.; Béthoux, N.; Beltramelli, J.; Bertin, V.; Bigi, A.; Billault, M.; Blaes, R.; de Botton, N.; Bouwhuis, M. C.; Bruijn, R.; Brunner, J.; Burgio, G. F.; Busto, J.; Cafagna, F.; Caillat, L.; Calzas, A.; Capone, A.; Caponetto, L.; Carmona, E.; Carr, J.; Castel, D.; Castorina, E.; Cavasinni, V.; Cecchini, S.; Ceres, A.; Charvis, P.; Chauchot, P.; Chiarusi, T.; Circella, M.; Coail, J.-Y.; Colnard, C.; Compére, C.; Coniglione, R.; Cottini, N.; Coyle, P.; Cuneo, S.; Cussatlegras, A.-S.; Damy, G.; van Dantzig, R.; Debonis, G.; de Marzo, C.; de Vita, R.; Dekeyser, I.; Delagnes, E.; Denans, D.; Deschamps, A.; Dessa, J.-X.; Destelle, J.-J.; Dinkespieler, B.; Distefano, C.; Donzaud, C.; Drogou, J.-F.; Druillole, F.; Durand, D.; Ernenwein, J.-P.; Escoffier, S.; Falchini, E.; Favard, S.; Fehr, F.; Feinstein, F.; Fiorello, C.; Flaminio, V.; Fratini, K.; Fuda, J.-L.; Galeotti, S.; Gallone, J.-M.; Giacomelli, G.; Girard, N.; Gojak, C.; Goret, Ph.; Graf, K.; Guilloux, F.; Hallewell, G.; Harakeh, M. N.; Hartmann, B.; Heijboer, A.; Heine, E.; Hello, Y.; Hernández-Rey, J. J.; Hößl, J.; Hoffman, C.; Hogenbirk, J.; Hubbard, J. R.; Jaquet, M.; Jaspers, M.; de Jong, M.; Jouvenot, F.; Kalantar-Nayestanaki, N.; Kappes, A.; Karg, T.; Katz, U.; Keller, P.; Kneib, J. P.; Kok, E.; Kok, H.; Kooijman, P.; Kopper, C.; Kouchner, A.; Kretschmer, W.; Kruijer, A.; Kuch, S.; Lagier, P.; Lahmann, R.; Lamanna, G.; Lamare, P.; Lambard, G.; Languillat, J. C.; Laschinsky, H.; Lavalle, J.; Le Guen, Y.; Le Provost, H.; Le van Suu, A.; Lefévre, D.; Legou, T.; Lelaizant, G.; Lim, G.; Lo Presti, D.; Loaec, G.; Loehner, H.; Loucatos, S.; Louis, F.; Lucarelli, F.; Lyashuk, V.; Mangano, S.; Marcelin, M.; Margiotta, A.; Masullo, R.; Mazéas, F.; Mazure, A.; Megna, R.; Melissas, M.; Migneco, E.; Mongelli, M.; Montaruli, T.; Morganti, M.; Moscoso, L.; Motz, H.; Musumeci, M.; Naumann, C.; Naumann-Godo, M.; Niess, V.; Noble, A.; Olivetto, C.; Ostasch, R.; Palanque-Delabrouille, N.; Payre, P.; Peek, H. Z.; Perez, A.; Petta, C.; Piattelli, P.; Pillet, R.; Pineau, J.-P.; Poinsignon, J.; Popa, V.; Pradier, T.; Racca, C.; Randazzo, N.; van Randwijk, J.; Real, D.; Regnier, M.; van Rens, B.; Réthoré, F.; Rewiersma, P.; Riccobene, G.; Rigaud, V.; Ripani, M.; Roca, V.; Roda, C.; Rolin, J. F.; Rostovtsev, A.; Roux, J.; Ruppi, M.; Russo, G. V.; Rusydi, G.; Salesa, F.; Salomon, K.; Sapienza, P.; Schmitt, F.; Schuller, J.-P.; Shanidze, R.; Sokalski, I.; Spona, T.; Spurio, M.; van der Steenhoven, G.; Stolarczyk, T.; Streeb, K.; Sulak, L.; Taiuti, M.; Tamburini, C.; Tao, C.; Tasca, L.; Terreni, G.; Urbano, F.; Valdy, P.; Valente, V.; Vallage, B.; Vaudaine, G.; Venekamp, G.; Verlaat, B.; Vernin, P.; van Wijk, R.; Wijnker, G.; Wobbe, G.; de Wolf, E.; Yao, A.-F.; Zaborov, D.; Zaccone, H.; Zornoza, J. D.; Zúñiga, J.

2007-11-01

A full-scale mechanical prototype line was deployed to a depth of 2500 m to test the leak tightness of the electronics containers and the pressure-resistant properties of an electromechanical cable under evaluation for use in the ANTARES deep-sea neutrino telescope. During a month-long immersion study, line parameter data were taken using miniature autonomous data loggers and shore-based optical time domain reflectometry. Details of the mechanical prototype line, the electromechanical cable and data acquisition are presented. Data taken during the immersion study revealed deficiencies in the pressure resistance of the electromechanical cable terminations at the entry points to the electronics containers. The improvements to the termination, which have been integrated into subsequent detection lines, are discussed. The line also allowed deep-sea acoustic measurements with a prototype hydrophone system. The technical setup of this system is described, and the first results of the data analysis are presented.

A translational study of resistance emergence using sequential direct-acting antiviral agents for hepatitis C using ultra-deep sequencing.

PubMed

Abe, Hiromi; Hayes, C Nelson; Hiraga, Nobuhiko; Imamura, Michio; Tsuge, Masataka; Miki, Daiki; Takahashi, Shoichi; Ochi, Hidenori; Chayama, Kazuaki

2013-09-01

Direct-acting antiviral agents (DAAs) against hepatitis C virus (HCV) have recently been developed and are ultimately hoped to replace interferon-based therapy. However, DAA monotherapy results in rapid emergence of resistant strains and DAAs must be used in combinations that present a high genetic barrier to resistance, although viral kinetics of multidrug-resistant strains remain poorly characterized. The aim of this study is to track the emergence and fitness of resistance using combinations of telaprevir and NS5A or NS5B inhibitors with genotype 1b clones. HCV-infected chimeric mice were treated with DAAs, and resistance was monitored using direct and ultra-deep sequencing. Combination therapy with telaprevir and BMS-788329 (NS5A inhibitor) reduced serum HCV RNA to undetectable levels. The presence of an NS3-V36A telaprevir resistance mutation resulted in poor response to telaprevir monotherapy but showed significant HCV reduction when telaprevir was combined with BMS-788329. However, a BMS-788329-resistant strain emerged at low frequency. Infection with a BMS-788329-resistant NS5A-L31V mutation rapidly resulted in gain of an additional NS5A-Y93A mutation that conferred telaprevir resistance during combination therapy. Infection with dual NS5AL31V/NS5AY93H mutations resulted in poor response to combination therapy and development of telaprevir resistance. Although HCV RNA became undetectable soon after the beginning of combination therapy with BMS-788329 and BMS-821095 (NS5B inhibitor), rebound with emergence of resistance against all three drugs occurred. Triple resistance also occurred following infection with the NS3V36A/NS5AL31V/NS5AY93H triple mutation. Resistant strains easily develop from cloned virus strains. Sequential use of DAAs should be avoided to prevent emergence of multidrug-resistant strains.

Intramuscular pressures in antigravity muscles using gravity-independent, pneumatic hardware.

PubMed

Macias, Brandon R; Minocha, Ranjeet; Cutuk, Adnan A; Hill, James; Shiau, Jonathon; Hargens, Alan R

2008-08-01

Resistive exercise helps prevent muscle atrophy in microgravity, but better exercise equipment is needed. Therefore, the purpose of this study was to determine if a pneumatic, gravity-independent leg-press device (LPD) provides sufficient force to leg musculature. We hypothesized that intramuscular pressure (IMP), a quantitative index of muscle force, is greater in the antigravity superficial posterior and deep posterior compartments than in the non-antigravity anterior compartment during bilateral leg-press exercise. Millar pressure transducers were inserted into the anterior, lateral, superficial posterior, and deep posterior muscle compartments of the left leg of eight healthy subjects (three women, five men). Subjects were supine on the Keiser SX-1, a pneumatic LPD. Then maximal voluntary contraction (MVC) was determined; each subject performed three consecutive voluntary contractions at approximately 18%, 50%, and 100% MVC while continuously measuring IMP. Repeated measures ANOVA were used to determine differences of IMPs between compartments and loads. The magnitudes of IMP (mean +/- SEM) at 18 - 3% (abbreviated approximately 18%), 50%, and 100% MVC in the superficial and deep posterior compartments were significantly greater than that in the anterior compartment during exercise (P < 0.05). Additionally, IMPs in all four compartments significantly rose as resistance increased at approximately 18%, 50%, and 100% MVC (P < 0.05). The LPD provides significantly increased resistance to all four compartments, but with greater loading of the antigravity compartments as compared to the non-antigravity compartment. Since antigravity muscles of the leg are contained primarily in the superficial and deep posterior compartments, the LPD may help prevent muscle atrophy associated with microgravity.

Biosynthesis of ilamycins featuring unusual building blocks and engineered production of enhanced anti-tuberculosis agents.

PubMed

Ma, Junying; Huang, Hongbo; Xie, Yunchang; Liu, Zhiyong; Zhao, Jin; Zhang, Chunyan; Jia, Yanxi; Zhang, Yun; Zhang, Hua; Zhang, Tianyu; Ju, Jianhua

2017-08-30

Tuberculosis remains one of the world's deadliest communicable diseases, novel anti-tuberculosis agents are urgently needed due to severe drug resistance and the co-epidemic of tuberculosis/human immunodeficiency virus. Here, we show the isolation of six anti-mycobacterial ilamycin congeners (1-6) bearing rare L-3-nitro-tyrosine and L-2-amino-4-hexenoic acid structural units from the deep sea-derived Streptomyces atratus SCSIO ZH16. The biosynthesis of the rare L-3-nitrotyrosine and L-2-amino-4-hexenoic acid units as well as three pre-tailoring and two post-tailoring steps are probed in the ilamycin biosynthetic machinery through a series of gene inactivation, precursor chemical complementation, isotope-labeled precursor feeding experiments, as well as structural elucidation of three intermediates (6-8) from the respective mutants. Most impressively, ilamycins E 1 /E 2 , which are produced in high titers by a genetically engineered mutant strain, show very potent anti-tuberculosis activity with an minimum inhibitory concentration value ≈9.8 nM to Mycobacterium tuberculosis H37Rv constituting extremely potent and exciting anti-tuberculosis drug leads.Tuberculosis (TB) remains one of the world's deadliest communicable diseases, novel anti-TB agents are urgently needed due to severe drug resistance and the co-epidemic of TB/HIV. Here, the authors show that anti-mycobacterial ilamycin congeners bearing unusual structural units possess extremely potent anti-tuberculosis activities.

Potential Magma Chambers beneath the Tatun Volcanic Area, Taiwan: Results from Magnetotelluric Survey and Monitoring

NASA Astrophysics Data System (ADS)

Chen, C.

2013-12-01

Previous earthquakes analysis indicated existing seismicity anomaly beneath Tatun volcano, Taiwan, possibly caused by the fluid activity of the volcano. Helium isotope studies also indicated that over 60% of the fumarolic gases and vapors originated from deep mantle in the Tatun volcano area. The chemistry of the fumarolic gases and vapors and seismicity anomaly are important issues in view of possible magma chamber in the Tatun volcano, where is in the vicinity of metropolitan Taipei, only 15 km north of the capital city. In this study magnetotelluric (MT) soundings and monitoring were deployed to understand the geoelectric structures in the Tatun volcano as Electromagnetic methods are sensitive to conductivity contrasts and can be used as a supplementary tool to delineate reservoir boundaries. An anticline extending more than 10 km beneath the Chih-Shin-Shan and Da-You-Kan areas was recognized. Low resistivity at a shallow and highly porous layer 500m thick might indicate circulation of heated water. However, a high resistivity layer at depth between 2 and 6 km was detected. This layer could be associated with high micro-earthquakes zone. The characteristics of this layer produced by either the magma chamber or other geothermal activity were similar to that of some other active volcanic areas in the world. At 6 km underground was a dome structure of medium resistivity. This structure could be interpreted as a magma chamber in which the magma is possibly cooling down, as judged by its relatively high resistivity. The exact attributes of the magma chamber were not precisely determined from the limited MT soundings. At present, a joint monitors including seismic activity, ground deformation, volcanic gases, and changes in water levels and chemistry are conducted by universities and government agencies. When unusual activity is detected, a response team may do more ground surveys to better determine if an eruption is likely.

Interfacial thermal resistance and thermal rectification in carbon nanotube film-copper systems.

PubMed

Duan, Zheng; Liu, Danyang; Zhang, Guang; Li, Qingwei; Liu, Changhong; Fan, Shoushan

2017-03-02

Thermal rectification occurring at interfaces is an important research area, which contains deep fundamental physics and has extensive application prospects. In general, the measurement of interfacial thermal rectification is based on measuring interfacial thermal resistance (ITR). However, ITRs measured via conventional methods cannot avoid extra thermal resistance asymmetry due to the contact between the sample and the thermometer. In this study, we employed a non-contact infrared thermal imager to monitor the temperature of super-aligned carbon nanotube (CNT) films and obtain the ITRs between the CNT films and copper. The ITRs along the CNT-copper direction and the reverse direction are in the ranges of 2.2-3.6 cm 2 K W -1 and 9.6-11.9 cm 2 K W -1 , respectively. The obvious difference in the ITRs of the two directions shows a significant thermal rectification effect, and the rectifying coefficient ranges between 0.57 and 0.68. The remarkable rectification factor is extremely promising for the manufacture of thermal transistors with a copper/CNT/copper structure and further thermal logic devices. Moreover, our method could be extended to other 2-dimensional materials, such as graphene and MoS 2 , for further explorations.

Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum

PubMed Central

Miles, Alistair; Iqbal, Zamin; Vauterin, Paul; Pearson, Richard; Campino, Susana; Theron, Michel; Gould, Kelda; Mead, Daniel; Drury, Eleanor; O'Brien, John; Ruano Rubio, Valentin; MacInnis, Bronwyn; Mwangi, Jonathan; Samarakoon, Upeka; Ranford-Cartwright, Lisa; Ferdig, Michael; Hayton, Karen; Su, Xin-zhuan; Wellems, Thomas; Rayner, Julian; McVean, Gil; Kwiatkowski, Dominic

2016-01-01

The malaria parasite Plasmodium falciparum has a great capacity for evolutionary adaptation to evade host immunity and develop drug resistance. Current understanding of parasite evolution is impeded by the fact that a large fraction of the genome is either highly repetitive or highly variable and thus difficult to analyze using short-read sequencing technologies. Here, we describe a resource of deep sequencing data on parents and progeny from genetic crosses, which has enabled us to perform the first genome-wide, integrated analysis of SNP, indel and complex polymorphisms, using Mendelian error rates as an indicator of genotypic accuracy. These data reveal that indels are exceptionally abundant, being more common than SNPs and thus the dominant mode of polymorphism within the core genome. We use the high density of SNP and indel markers to analyze patterns of meiotic recombination, confirming a high rate of crossover events and providing the first estimates for the rate of non-crossover events and the length of conversion tracts. We observe several instances of meiotic recombination within copy number variants associated with drug resistance, demonstrating a mechanism whereby fitness costs associated with resistance mutations could be compensated and greater phenotypic plasticity could be acquired. PMID:27531718

Resistivity dependence on Zn concentration in semi-insulating (Cd,Zn)Te

NASA Astrophysics Data System (ADS)

Fiederle, Michael; Fauler, Alex; Babentsov, Vladimir N.; Franc, Jan; Benz, Klaus Werner

2003-01-01

The resistivity dependence on Zn concentration had been investigated in semi-insulating (Cd,Zn)Te crystals grown by the vertical Bridgman method. A coorelation between the zinc concentration and the resistivity distribution could be found. The obtained resistivity was in the interval of 2 ×109-1010 Ω cm as expected from the model of compensation. The main deep compensating levels detected by Photo Induced Current Transient Spectroscopy (PICTS) were at 0.64 +/- 0.02 eV and close the middle of the band gap at 0.80 +/- 0.02 eV.

The big squeeze: ecosystem change and contraction of habitat for newly discovered deep-water reefs off the U.S. West Coast

NASA Astrophysics Data System (ADS)

Wickes, L.; Etnoyer, P. J.; Lauermann, A.; Rosen, D.

2016-02-01

Cold-water reefs are fragile, complex ecosystems that extend into the bathyal depths of the ocean, creating three dimensional structure and habitat for a diversity of deep-water invertebrates and fishes. The cold waters of the California Current support a diverse assemblage of these corals at relatively shallow depths close to shore. At these depths and locations the communities face a multitude of stressors, including low carbonate saturations, hypoxia, changing temperature, and coastal pollution. The current study employed ROV surveys (n=588, 2003-2015) to document the distribution of deep-sea corals in the Southern California Bight, including the first description of a widespread reef-building coral in the naturally acidified waters off the U.S. West Coast. We provide empirical evidence of species survival in the corrosive waters (Ωarag 0.67-1.86), but find loss of reef integrity. Recent publications have implied acclimation, resistance, and resilience of cold-water reef-building corals to ocean acidification, but results of this study indicate a cost to skeletal framework development with a subsequent loss of coral habitat. While ocean acidification and declines in oxygen are expected to further impinge on Lophelia at depth (𝑥̅=190 m), surface warming and coastal polution may affect shallower populations and mesophotic reef assemblages, resulting in a contraction of available coral habitat. Recent observations of die offs of gorgonians and antipatharians from surveys in shallow (50 m) and deep water (500 m) provide compelling evidence of ongoing ecosystem changes. Concurrent losses in habitat quality in deep and mesophotic waters suggest that corals may be "squeezed" into a more restricted depth range. New monitoring efforts aim to characterize the health and condition of deep corals with respect to gradients in carbonate chemistry, coastal pollution and changing temperatures, to assess vulnerability and both current and future habitat suitability.

[Geriatric Proximal Femoral Fracture and Urinary Tract Infection - Considerations for Perioperative Infection Prophylaxis].

PubMed

Probst, A; Reimers, N; Hecht, A; Langenhan, R

2016-10-01

Background: Perioperative infection prophylaxis with cephalosporins is standard in surgical treatment of proximal femoral fractures (PFF). Geriatric patients (pat.) are at risk of chronic infections and the bacteria from these can lead to unknown hygienic problems in an early operation. We therefore characterised the colonisation of the urinary tract in pat. (≥ 65 years) with PFF and observed bacterial development in deep wound infections over a period of 10 years. The aim was to discover gaps in perioperative infection prophylaxis. Patients and Methods: Between September 2013 and November 2015, colonisation of the urinary tract and microbial resistance were investigated on admission of all pat. (≥ 65 years) with the diagnosis of PFF (n = 351; f/m 263/88; median age [∅] 83.57 [65-100] years). Between 2005 and 2014, 2161 pat. with a PFF were operated in our clinic (f/m 1623/538; ∅ 82.35 [65-101] years). 991 pat. (∅ 81.84 [65-101] years) with femoral neck fracture [FNF] were treated with endoprosthesis/osteosynthesis, 1170 pat. (∅ 82,78 [65-101] years) with per-/subtrochanteric fracture [PTF] were treated with osteosynthesis. In a retrospective data analysis, deep wound infections, microbiological composition and changes in microbial resistances over time were identified. Results: Bacteriuria (BU) was detected in the urine sediment of 35.61 % (n = 125) of our pat. In 47.2 % of these pat., BU was accompanied by laboratory signs of manifest urinary tract infection. In 10.4 % of these pat., colonisation of the urinary tract with multi-resistant pathogens was detected; 26.4 % were resistant to cefuroxime. The rate of deep infections in pat. with endoprosthesis/osteosynthesis in FNF was 2.8 % (n = 28; f/m 19/9; ∅ 81.35 [67-92] years), with osteosynthesis in PTF 1,1 % (n = 14; f/m 10/4; ∅ 81.0 [70-91] years). A comparison of the periods 2005-2009 and 2010-2014 showed a shift in the spectrum of pathogens from cephalosporin-sensitive to cephalosporin-resistant enterococci. Resistance of pathogens against cephalosporins increased from 43 to 81 %. Conclusion: We found an increasing risk in geriatric pat. from multiresistant pathogens in the urinary tract and from an increase in the cephalosporin resistance of pathogens in urinary tract infections and in deep wound infections. This indicates that perioperative infection prophylaxis with a cephalosporin is not effective. Especially in nursing homes, development of resistance to antibiotics is an increasing problem. Thus, concepts of perioperative infection prophylaxis in geriatric patients should be reconsidered. Georg Thieme Verlag KG Stuttgart · New York.

Simultaneous fabrication of a microcavity absorber-emitter on a Ni-W alloy film

NASA Astrophysics Data System (ADS)

Nashun; Kagimoto, Masahiro; Iwami, Kentaro; Umeda, Norihiro

2017-10-01

A process for the simultaneous fabrication of microcavity structures on both sides of a film was proposed and demonstrated to develop a free-standing-type integrated absorber-emitter for use in solar thermophotovoltaic power generation systems. The absorber-emitter-integrated film comprised a heat-resistant Ni-W alloy deposited by electroplating. A two-step silicon mould was fabricated using deep reactive-ion etching and electron beam lithography. Cavity arrays with different unit sizes were successfully fabricated on both sides of the film; these arrays are suitable for use as a solar spectrum absorber and an infrared-selective emitter. Their emissivity spectra were characterised through UV-vis-NIR and Fourier transform infrared spectroscopy.

Branimycins B and C, Antibiotics Produced by the Abyssal Actinobacterium Pseudonocardia carboxydivorans M-227.

PubMed

Braña, Alfredo F; Sarmiento-Vizcaíno, Aida; Pérez-Victoria, Ignacio; Otero, Luis; Fernández, Jonathan; Palacios, Juan José; Martín, Jesús; de la Cruz, Mercedes; Díaz, Caridad; Vicente, Francisca; Reyes, Fernando; García, Luis A; Blanco, Gloria

2017-02-24

Two new antibiotics, branimycins B (2) and C (3), were produced by fermentation of the abyssal actinobacterium Pseudonocardia carboxydivorans M-227, isolated from deep seawater of the Avilés submarine Canyon. Their structures were elucidated by HRMS and NMR analyses. These compounds exhibit antibacterial activities against a panel of Gram-positive bacteria, including Corynebacterium urealyticum, Clostridium perfringens, and Micrococcus luteus, and against the Gram-negative bacterium Neisseria meningitidis. Additionally, branimycin B displayed moderate antibacterial activity against other Gram-negative bacteria such as Bacteroides fragilis, Haemophilus influenzae, and Escherichia coli, and branimycin C against the Gram-positive Enterococcus faecalis and methicillin-sensitive and methicillin-resistant Staphylococcus aureus.

DeepQA: improving the estimation of single protein model quality with deep belief networks.

PubMed

Cao, Renzhi; Bhattacharya, Debswapna; Hou, Jie; Cheng, Jianlin

2016-12-05

Protein quality assessment (QA) useful for ranking and selecting protein models has long been viewed as one of the major challenges for protein tertiary structure prediction. Especially, estimating the quality of a single protein model, which is important for selecting a few good models out of a large model pool consisting of mostly low-quality models, is still a largely unsolved problem. We introduce a novel single-model quality assessment method DeepQA based on deep belief network that utilizes a number of selected features describing the quality of a model from different perspectives, such as energy, physio-chemical characteristics, and structural information. The deep belief network is trained on several large datasets consisting of models from the Critical Assessment of Protein Structure Prediction (CASP) experiments, several publicly available datasets, and models generated by our in-house ab initio method. Our experiments demonstrate that deep belief network has better performance compared to Support Vector Machines and Neural Networks on the protein model quality assessment problem, and our method DeepQA achieves the state-of-the-art performance on CASP11 dataset. It also outperformed two well-established methods in selecting good outlier models from a large set of models of mostly low quality generated by ab initio modeling methods. DeepQA is a useful deep learning tool for protein single model quality assessment and protein structure prediction. The source code, executable, document and training/test datasets of DeepQA for Linux is freely available to non-commercial users at http://cactus.rnet.missouri.edu/DeepQA/ .

Deep melting reveals liquid structural memory and anomalous ferromagnetism in bismuth.

PubMed

Shu, Yu; Yu, Dongli; Hu, Wentao; Wang, Yanbin; Shen, Guoyin; Kono, Yoshio; Xu, Bo; He, Julong; Liu, Zhongyuan; Tian, Yongjun

2017-03-28

As an archetypal semimetal with complex and anisotropic Fermi surface and unusual electric properties (e.g., high electrical resistance, large magnetoresistance, and giant Hall effect), bismuth (Bi) has played a critical role in metal physics. In general, Bi displays diamagnetism with a high volumetric susceptibility ([Formula: see text]10 -4 ). Here, we report unusual ferromagnetism in bulk Bi samples recovered from a molten state at pressures of 1.4-2.5 GPa and temperatures above [Formula: see text]1,250 K. The ferromagnetism is associated with a surprising structural memory effect in the molten state. On heating, low-temperature Bi liquid (L) transforms to a more randomly disordered high-temperature liquid (L') around 1,250 K. By cooling from above 1,250 K, certain structural characteristics of liquid L' are preserved in L. Bi clusters with characteristics of the liquid L' motifs are further preserved through solidification into the Bi-II phase across the pressure-independent melting curve, which may be responsible for the observed ferromagnetism.

Deep melting reveals liquid structural memory and anomalous ferromagnetism in bismuth

PubMed Central

Shu, Yu; Yu, Dongli; Hu, Wentao; Wang, Yanbin; Shen, Guoyin; Kono, Yoshio; Xu, Bo; He, Julong; Liu, Zhongyuan; Tian, Yongjun

2017-01-01

As an archetypal semimetal with complex and anisotropic Fermi surface and unusual electric properties (e.g., high electrical resistance, large magnetoresistance, and giant Hall effect), bismuth (Bi) has played a critical role in metal physics. In general, Bi displays diamagnetism with a high volumetric susceptibility (∼10−4). Here, we report unusual ferromagnetism in bulk Bi samples recovered from a molten state at pressures of 1.4–2.5 GPa and temperatures above ∼1,250 K. The ferromagnetism is associated with a surprising structural memory effect in the molten state. On heating, low-temperature Bi liquid (L) transforms to a more randomly disordered high-temperature liquid (L′) around 1,250 K. By cooling from above 1,250 K, certain structural characteristics of liquid L′ are preserved in L. Bi clusters with characteristics of the liquid L′ motifs are further preserved through solidification into the Bi-II phase across the pressure-independent melting curve, which may be responsible for the observed ferromagnetism. PMID:28289195

Exploration of a Buried Building Foundation and a Septic Tank Plume Dispersion Using a Laboratory-fabricated Resistivity Apparatus

NASA Astrophysics Data System (ADS)

Lachhab, A.; Stepanik, N.; Booterbaugh, A.

2010-12-01

In the following study, an electrical resistivity device was built and used in both a laboratory setup and in the field to accurately identify the location of a septic tank and the foundation of Gustavus Adolphus (GA); a building that was burned at Susquehanna University in 1964. The entire apparatus, which costs a fraction of the price of a typical electrical resistivity device, was tested for accuracy in the laboratory prior to its use in the field. The electrical resistivity apparatus consists of a deep-cycle twelve volt battery, an AC to DC inverter and two multimeters to measure the potential and the current intensity from four linear electrodes via a wireless data transmission system. This apparatus was constructed by using basic inexpensive electrical and electronic equipments. The recorded potential and current values were used to calculate the apparent resistivity of different materials adopting the Wenner array for both investigations. Several tests were performed on the tabletop bench, producing consistent results when applied to find small bricks structures with different geometrical arrangement buried under a mixed sand-soil formation. The apparatus was also used to investigate a subsurface salty water plume in the same formation. The horizontal resistivity profile obtained over the vertical small brick wall matched the theoretical apparent resistivity of resistivity versus displacement on a vertical dike in a homogeneous material. In addition, the two-dimensional resistivity profile replicate the salty plume size conformably. Following the success on the small-scale laboratory tabletop bench, the electrical resistivity apparatus was implemented in the field to explore the foundation of GA in one location and the septic tank in another. An array of transects were performed, analyzed and plotted using MATLAB. The three dimensional contours of apparent resistivity depicted exactly the locations of the buried foundation walls, the septic tank and the leaking plume.

Correlation between the transport mechanisms in conductive filaments inside Ta2O5-based resistive switching devices and in substoichiometric TaOx thin films

NASA Astrophysics Data System (ADS)

Rosário, Carlos M. M.; Thöner, Bo; Schönhals, Alexander; Menzel, Stephan; Wuttig, Matthias; Waser, Rainer; Sobolev, Nikolai A.; Wouters, Dirk J.

2018-05-01

Conductive filaments play a key role in redox-based resistive random access memory (ReRAM) devices based on the valence change mechanism, where the change of the resistance is ascribed to the modulation of the oxygen content in a local region of these conductive filaments. However, a deep understanding of the filaments' composition and structure is still a matter of debate. We approached the problem by comparing the electronic transport, at temperatures from 300 K down to 2 K, in the filaments and in TaOx films exhibiting a substoichiometric oxygen content. The filaments were created in Ta (15 nm)/Ta2O5 (5 nm)/Pt crossbar ReRAM structures. In the TaOx thin films with various oxygen contents, the in-plane transport was studied. There is a close similarity between the electrical properties of the conductive filaments in the ReRAM devices and of the TaOx films with x ˜ 1, evidencing also no dimensionality difference for the electrical transport. More specifically, for both systems there are two different conduction processes: one in the higher temperature range (from 50 K up to ˜300 K), where the conductivity follows a √{ T } dependence, and one at lower temperatures (<50 K), where the conductivity follows the exp(-1 / √{ T } ) dependence. This suggests a strong similarity between the material composition and structure of the filaments and those of the substoichiometric TaOx films. We also discuss the temperature dependence of the conductivity in the framework of possible transport mechanisms, mainly of those normally observed for granular metals.

Heat Transfer Principles in Thermal Calculation of Structures in Fire

PubMed Central

Zhang, Chao; Usmani, Asif

2016-01-01

Structural fire engineering (SFE) is a relatively new interdisciplinary subject, which requires a comprehensive knowledge of heat transfer, fire dynamics and structural analysis. It is predominantly the community of structural engineers who currently carry out most of the structural fire engineering research and design work. The structural engineering curriculum in universities and colleges do not usually include courses in heat transfer and fire dynamics. In some institutions of higher education, there are graduate courses for fire resistant design which focus on the design approaches in codes. As a result, structural engineers who are responsible for structural fire safety and are competent to do their jobs by following the rules specified in prescriptive codes may find it difficult to move toward performance-based fire safety design which requires a deep understanding of both fire and heat. Fire safety engineers, on the other hand, are usually focused on fire development and smoke control, and may not be familiar with the heat transfer principles used in structural fire analysis, or structural failure analysis. This paper discusses the fundamental heat transfer principles in thermal calculation of structures in fire, which might serve as an educational guide for students, engineers and researchers. Insights on problems which are commonly ignored in performance based fire safety design are also presented. PMID:26783379

Sensitive Deep-Sequencing-Based HIV-1 Genotyping Assay To Simultaneously Determine Susceptibility to Protease, Reverse Transcriptase, Integrase, and Maturation Inhibitors, as Well as HIV-1 Coreceptor Tropism

PubMed Central

Gibson, Richard M.; Meyer, Ashley M.; Winner, Dane; Archer, John; Feyertag, Felix; Ruiz-Mateos, Ezequiel; Leal, Manuel; Robertson, David L.; Schmotzer, Christine L.

2014-01-01

With 29 individual antiretroviral drugs available from six classes that are approved for the treatment of HIV-1 infection, a combination of different phenotypic and genotypic tests is currently needed to monitor HIV-infected individuals. In this study, we developed a novel HIV-1 genotypic assay based on deep sequencing (DeepGen HIV) to simultaneously assess HIV-1 susceptibilities to all drugs targeting the three viral enzymes and to predict HIV-1 coreceptor tropism. Patient-derived gag-p2/NCp7/p1/p6/pol-PR/RT/IN- and env-C2V3 PCR products were sequenced using the Ion Torrent Personal Genome Machine. Reads spanning the 3′ end of the Gag, protease (PR), reverse transcriptase (RT), integrase (IN), and V3 regions were extracted, truncated, translated, and assembled for genotype and HIV-1 coreceptor tropism determination. DeepGen HIV consistently detected both minority drug-resistant viruses and non-R5 HIV-1 variants from clinical specimens with viral loads of ≥1,000 copies/ml and from B and non-B subtypes. Additional mutations associated with resistance to PR, RT, and IN inhibitors, previously undetected by standard (Sanger) population sequencing, were reliably identified at frequencies as low as 1%. DeepGen HIV results correlated with phenotypic (original Trofile, 92%; enhanced-sensitivity Trofile assay [ESTA], 80%; TROCAI, 81%; and VeriTrop, 80%) and genotypic (population sequencing/Geno2Pheno with a 10% false-positive rate [FPR], 84%) HIV-1 tropism test results. DeepGen HIV (83%) and Trofile (85%) showed similar concordances with the clinical response following an 8-day course of maraviroc monotherapy (MCT). In summary, this novel all-inclusive HIV-1 genotypic and coreceptor tropism assay, based on deep sequencing of the PR, RT, IN, and V3 regions, permits simultaneous multiplex detection of low-level drug-resistant and/or non-R5 viruses in up to 96 clinical samples. This comprehensive test, the first of its class, will be instrumental in the development of new antiretroviral drugs and, more importantly, will aid in the treatment and management of HIV-infected individuals. PMID:24468782

Electrical geophysical study over the Norman Landfill, near Norman, Oklahoma

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bisdorf, R.J.

In 1995 and 1996 the US Geological Survey made 40 Schlumberger dc electrical resistivity soundings at the Norman Landfill, near Norman, Oklahoma. Interpretation of the resistivity data indicates that high resistivities (>300 ohm-m) are related to dry sand, intermediate resistivities (45-300 ohm-m) are related to freshwater saturated sand, and low resistivities (<45 ohm-m) are related to fine-grained materials or materials saturated with the conductive fluids. Interpreted resistivity maps show a low resistivity anomaly that extends from under the landfill to just past a nearby slough. This anomaly corresponds to known areas of ground water contamination. A resistivity cross section, constructedmore » from interpreted Schlumberger soundings, shows that this low resistivity anomaly is about 5 m deep and up to 9 m thick.« less

Admixed Phylogenetic Distribution of Drug Resistant Mycobacterium tuberculosis in Saudi Arabia

PubMed Central

Varghese, Bright; Supply, Philip; Allix-Béguec, Caroline; Shoukri, Mohammed; Al-Omari, Ruba; Herbawi, Mais; Al-Hajoj, Sahal

2013-01-01

Background The phylogeographical structure of Mycobacterium tuberculosis is generally bimodal in low tuberculosis (TB) incidence countries, where genetic lineages of the isolates generally differ with little strain clustering between autochthonous and foreign-born TB patients. However, less is known on this structure in Saudi Arabia—the most important hub of human migration as it hosts a total population of expatriates and pilgrims from all over the world which is equal to that of its citizens. Methodology We explored the mycobacterial phylogenetic structure and strain molecular clustering in Saudi Arabia by genotyping 322 drug-resistant clinical isolates collected over a 12-month period in a national drug surveillance survey, using 24 locus-based MIRU-VNTR typing and spoligotyping. Principal Findings In contrast to the cosmopolitan population of the country, almost all the known phylogeographic lineages of M. tuberculosis complex (with noticeable exception of Mycobacterium africanum/West-African 1 and 2) were detected, with Delhi/CAS (21.1%), EAI (11.2%), Beijing (11.2%) and main branches of the Euro-American super-lineage such as Ghana (14.9%), Haarlem (10.6%) and Cameroon (7.8%) being represented. Statistically significant associations of strain lineages were observed with poly-drug resistance and multi drug resistance especially among previously treated cases (p value of < = 0.001 for both types of resistance), with relative over-representation of Beijing strains in the latter category. However, there was no significant difference among Saudi and non-Saudi TB patients regarding distribution of phylogenetic lineages (p = 0.311). Moreover, 59.5% (22/37) of the strain molecular clusters were shared between the Saudi born and immigrant TB patients. Conclusions Specific distribution of M. tuberculosis phylogeographic lineages is not observed between the autochthonous and foreign-born populations. These observations might reflect both socially favored ongoing TB transmission between the two population groups, and historically deep-rooted, prolonged contacts and trade relations of the peninsula with other world regions. More vigorous surveillance and strict adherence to tuberculosis control policies are urgently needed in the country. PMID:23383340

Elasticity of Deep-Earth Materials at High P and T: Implication for Earths Lower Mantle

NASA Astrophysics Data System (ADS)

Bass, Jay; Sinogeikin, S. V.; Mattern, Estelle; Jackson, J. M.; Matas, J.; Wang, J.; Ricard, Y.

2005-03-01

Brillouin spectroscopy allows measurements of sound velocities and elasticity on phases of geophysical interest at high Pressures and Temperatures. This technique was used to measure the properties of numerous important phases of Earths deep interior. Emphasis is now on measurements at elevated P-T conditions, and measurements on dense polycrystals. Measurements to 60 GPa were made using diamond anvil cells. High temperature is achieved by electrical resistance and laser heating. Excellent results are obtained for polycrystalline samples of dense oxides such as silicate spinels, and (Mg,Al)(Si,Al)O3 --perovskites. A wide range of materials can now be characterized. These and other results were used to infer Earths average lower mantle composition and thermal structure by comparing mineral properties at lower mantle P-T conditions to global Earth models. A formal inversion procedure was used. Inversions of density and bulk sound velocity do not provide robust compositional and thermal models. Including shear properties in the inversions is important to obtain unique solutions. We discuss the range of models consistent with present lab results, and data needed to further refine lower mantle models.

Implications and concerns of deep-seated disposal of hydrocarbon exploration produced water using three-dimensional contaminant transport model in Bhit Area, Dadu District of Southern Pakistan.

PubMed

Ahmad, Zulfiqar; Akhter, Gulraiz; Ashraf, Arshad; Fryar, Alan

2010-11-01

A three-dimensional contaminant transport model has been developed to simulate and monitor the migration of disposal of hydrocarbon exploration produced water in Injection well at 2,100 m depth in the Upper Cretaceous Pab sandstone, Bhit area in Dadu district of Southern Pakistan. The regional stratigraphic and structural geological framework of the area, landform characteristics, meteorological parameters, and hydrogeological milieu have been used in the model to generate the initial simulation of steady-state flow condition in the underlying aquifer's layers. The geometry of the shallow and deep-seated characteristics of the geological formations was obtained from the drilling data, electrical resistivity sounding surveys, and geophysical well-logging information. The modeling process comprised of steady-state simulation and transient simulation of the prolific groundwater system of contamination transport after 1, 10, 30 years of injection. The contaminant transport was evaluated from the bottom of the injection well, and its short- and long-term effects were determined on aquifer system lying in varying hydrogeological and geological conditions.

Effects of substrate temperatures and deposition rates on properties of aluminum fluoride thin films in deep-ultraviolet region.

PubMed

Sun, Jian; Li, Xu; Zhang, Weili; Yi, Kui; Shao, Jianda

2012-12-10

Aluminum fluoride (AlF(3)) is a low-refractive-index material widely used in coatings for deep-ultraviolet (DUV) optical systems, especially 193 nm laser systems. Low optical loss and stability are essential for film application. In this study, AlF(3)> thin films were prepared by thermal evaporation with a resistive heating boat. The effects of substrate temperatures and deposition rates on the optical properties in vacuum and in air, composition, and microstructures were discussed respectively. In vacuum the deposition parameters directly influenced the microstructures that determined the refractive index. When the films were exposed to air, aluminum oxide (Al(2)O(3)) formed in the films with water adsorption. Thus the refractive index increased and a nonmonotonic changing trend of the refractive index with substrate temperature was observed. The Al(2)O(3) was also found to be conductive to reducing absorption loss. AlF(3) films prepared at a high substrate temperature and deposition rate could yield stable structures with large optical loss.

"It's Like This Myth of the Supernegro": Resisting Narratives of Damage and Struggle in the Neoliberal Educational Policy Context

ERIC Educational Resources Information Center

Baldridge, Bianca J.

2017-01-01

As pathologizing, racialized, and patriarchal rhetoric undergirds neoliberal education reform, deficit narratives characterize the education of Black youth. Such narratives present deep challenges for educational policy and community-based educational spaces. This article explores the ways in which community-based educators resist narratives of…

Rifampicin treatment of canine pyoderma due to multidrug-resistant meticillin-resistant staphylococci: a retrospective study of 32 cases.

PubMed

De Lucia, Michela; Bardagi, Mar; Fabbri, Elisabetta; Ferreira, Diana; Ferrer, Lluis; Scarampella, Fabia; Zanna, Giordana; Fondati, Alessandra

2017-04-01

Rifampicin has received increased interest in veterinary dermatology because of its activity against multidrug-resistant meticillin-resistant staphylococci (MRS). There is limited knowledge about the efficacy and safety of rifampicin in dogs. To provide information on response to treatment and adverse effects in dogs treated with rifampicin for multidrug-resistant MRS pyoderma. Thirty two dogs treated with rifampicin for rifampicin-susceptible multidrug-resistant MRS pyoderma. Retrospective review of medical records, including alanine aminotransferase (ALT) and alkaline phosphatase (ALP) serum activity levels and total bilirubin concentrations, obtained before and throughout the treatment, was performed. Oral rifampicin as sole systemic antimicrobial therapy (median dose 5 mg/kg twice daily) was effective in 71.88% of cases. Topical antimicrobials were used in most cases. Median duration of rifampicin treatment was five weeks for superficial pyoderma and four weeks for deep pyoderma. Gastrointestinal signs were reported in 15% of treated dogs. Statistically significant increases of ALT (P = 0.045) and ALP (P = 0.0002) values after 3-4 weeks of treatment was observed. The median increase was equal to 0.3 and ×1.5 the upper limit of the reference ranges for ALT and ALP, respectively. Oral rifampicin combined with topical antimicrobials can be considered an effective therapeutic option for canine superficial and deep pyoderma caused by rifampicin-susceptible multidrug-resistant MRS. Liver enzyme induction might be the most important cause of ALT and ALP increase associated with rifampicin therapy in dogs. © 2016 ESVD and ACVD.

Out-diffusion of deep donors in nitrogen-doped silicon and the diffusivity of vacancies

NASA Astrophysics Data System (ADS)

Voronkov, V. V.; Falster, R.

2012-07-01

A strong resistivity increase in annealed nitrogen-doped silicon samples was reported long ago—but has remained not fully understood. It is now shown that the complicated evolution of the resistivity depth profiles observed can be reproduced by a simple model based on the out-diffusion of some relevant species. Two versions of such an approach were analyzed: (A) out-diffusion of deep donors treated as VN (off-centre substitutional nitrogen), (B) out-diffusion of vacancies (V) and interstitial trimers (N3) produced by dissociation of VN3. Version B, although more complicated, is attractive due to a coincidence of the deduced vacancy diffusivity DV at 1000 °C with the value extrapolated from low-temperature data by Watkins.

Resistance patterns in clinical isolates of pathogenic Actinomyces species.

PubMed

Steininger, C; Willinger, Birgit

2016-02-01

Actinomyces spp. are commensals that may occasionally invade deep tissue structures, causing difficult-to-treat and disfiguring lesions. Information on antimicrobial resistance patterns is limited to observations from two previous studies. Therefore, we examined antimicrobial resistance patterns in clinical isolates of Actinomyces spp. In this retrospective assessment of antimicrobial resistance patterns, we identified 392 Actinomyces spp. at a tertiary care centre from January 2008 to December 2014. MICs of various antimicrobial agents, including ampicillin/sulbactam, meropenem, clindamycin, metronidazole and vancomycin for anaerobic actinomycetes, were obtained by Etest. For aerobic actinomycetes, imipenem, cefotaxime, amikacin, linezolid, moxifloxacin, trimethoprim/sulfamethoxazole and clarithromycin were tested. MIC results were interpreted based on guidelines published by the CLSI (formerly NCCLS). Actinomyces meyeri was predominantly isolated and accounted for 34% of all Actinomyces spp. identified, followed by Actinomyces turicensis with 23%. Actinomyces neuii is considered to be a rare Actinomyces sp., but accounted for 8% of isolates. Antimicrobial susceptibility testing of isolates showed that the Actinomyces spp. were almost uniformly susceptible to β-lactam antimicrobials (with and without β-lactamase inhibitors), carbapenems, tetracyclines and vancomycin. In contrast, Actinomyces spp. isolates were almost uniformly resistant to metronidazole. β-Lactam antimicrobial agents remain the first choice, whereas metronidazole should be avoided, in the treatment of actinomycosis. Reasonable alternatives for treatment are tetracyclines and carbapenems. © The Author 2015. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Deep crustal electromagnetic structure of central India tectonic zone and its implications

NASA Astrophysics Data System (ADS)

Naganjaneyulu, K.; Naidu, G. Dhanunjaya; Rao, M. Someswara; Shankar, K. Ravi; Kishore, S. R. K.; Murthy, D. N.; Veeraswamy, K.; Harinarayana, T.

2010-07-01

Magnetotelluric data at 45 locations along the Mahan-Khajuria Kalan profile in the central India tectonic zone are analysed. This 290 km long profile yields data in the period range 0.001-1000 s across the tectonic elements of the study region bounded by Purna fault, Gavligarh fault, Tapti fault, Narmada South fault and Narmada North fault. Multi-site, multi-frequency analysis suggests N70°E as the geo-electric strike direction. Data rotated into the N70°E strike direction are modelled using a non-linear conjugate gradient scheme with error floors of 10% for both apparent resistivity and phase components. Two-dimensional magnetotelluric model yields conductors that correlate with known faults in the study region and regional seismicity. Presence of a -30 mgal gravity high together with the observed conductive bodies (less than 20 ohm m) in the deep crust beneath the Purna graben and Tapti valley is explained by the process of magmatic underplating. The conductive bodies beneath the Mahakoshal rift belt and Vindhyans accompanied by regional gravity lows of the order -70 mgal are attributed to the presence of deep crustal fluids. Following the re-activation model proposed for the entire region, the conductors (20 ohm m) at various depth levels correspond to mafic magmatic and/or fluid intrusions controlled by deep-seated faults that seem to tap reservoirs beyond the crust-mantle boundary. The shallow depth localized faults also seem to have facilitated further upward movement of these underplated material and fluids release during this process.

Growth and characterization of β-Ga2O3 thin films by molecular beam epitaxy for deep-UV photodetectors

NASA Astrophysics Data System (ADS)

Ghose, Susmita; Rahman, Shafiqur; Hong, Liang; Rojas-Ramirez, Juan Salvador; Jin, Hanbyul; Park, Kibog; Klie, Robert; Droopad, Ravi

2017-09-01

The growth of high quality epitaxial beta-gallium oxide (β-Ga2O3) using a compound source by molecular beam epitaxy has been demonstrated on c-plane sapphire (Al2O3) substrates. The compound source provides oxidized gallium molecules in addition to oxygen when heated from an iridium crucible in a high temperature effusion cell enabling a lower heat of formation for the growth of Ga2O3, resulting in a more efficient growth process. This source also enabled the growth of crystalline β-Ga2O3 without the need for additional oxygen. The influence of the substrate temperatures on the crystal structure and quality, chemical bonding, surface morphology, and optical properties has been systematically evaluated by x-ray diffraction, scanning transmission electron microscopy, x-ray photoelectron spectroscopy, atomic force microscopy, spectroscopic ellipsometry, and UV-vis spectroscopy. Under optimized growth conditions, all films exhibited pure (" separators="|2 ¯01 ) oriented β-Ga2O3 thin films with six-fold rotational symmetry when grown on a sapphire substrate. The thin films demonstrated significant absorption in the deep-ultraviolet (UV) region with an optical bandgap around 5.0 eV and a refractive index of 1.9. A deep-UV photodetector fabricated on the high quality β-Ga2O3 thin film exhibits high resistance and small dark current (4.25 nA) with expected photoresponse for 254 nm UV light irradiation suggesting that the material grown using the compound source is a potential candidate for deep-ultraviolet photodetectors.

Correlation between deep fluids, tremor and creep along the central San Andreas fault

USGS Publications Warehouse

Becken, M.; Ritter, O.; Bedrosian, P.A.; Weckmann, U.

2011-01-01

The seismicity pattern along the San Andreas fault near Parkfield and Cholame, California, varies distinctly over a length of only fifty kilometres. Within the brittle crust, the presence of frictionally weak minerals, fault-weakening high fluid pressures and chemical weakening are considered possible causes of an anomalously weak fault northwest of Parkfield. Non-volcanic tremor from lower-crustal and upper-mantle depths is most pronounced about thirty kilometres southeast of Parkfield and is thought to be associated with high pore-fluid pressures at depth. Here we present geophysical evidence of fluids migrating into the creeping section of the San Andreas fault that seem to originate in the region of the uppermost mantle that also stimulates tremor, and evidence that along-strike variations in tremor activity and amplitude are related to strength variations in the lower crust and upper mantle. Interconnected fluids can explain a deep zone of anomalously low electrical resistivity that has been imaged by magnetotelluric data southwest of the Parkfield-Cholame segment. Near Cholame, where fluids seem to be trapped below a high-resistivity cap, tremor concentrates adjacent to the inferred fluids within a mechanically strong zone of high resistivity. By contrast, subvertical zones of low resistivity breach the entire crust near the drill hole of the San Andreas Fault Observatory at Depth, northwest of Parkfield, and imply pathways for deep fluids into the eastern fault block, coincident with a mechanically weak crust and the lower tremor amplitudes in the lower crust. Fluid influx to the fault system is consistent with hypotheses of fault-weakening high fluid pressures in the brittle crust.

Ocean chemistry. Dilution limits dissolved organic carbon utilization in the deep ocean.

PubMed

Arrieta, Jesús M; Mayol, Eva; Hansman, Roberta L; Herndl, Gerhard J; Dittmar, Thorsten; Duarte, Carlos M

2015-04-17

Oceanic dissolved organic carbon (DOC) is the second largest reservoir of organic carbon in the biosphere. About 72% of the global DOC inventory is stored in deep oceanic layers for years to centuries, supporting the current view that it consists of materials resistant to microbial degradation. An alternative hypothesis is that deep-water DOC consists of many different, intrinsically labile compounds at concentrations too low to compensate for the metabolic costs associated to their utilization. Here, we present experimental evidence showing that low concentrations rather than recalcitrance preclude consumption of a substantial fraction of DOC, leading to slow microbial growth in the deep ocean. These findings demonstrate an alternative mechanism for the long-term storage of labile DOC in the deep ocean, which has been hitherto largely ignored. Copyright © 2015, American Association for the Advancement of Science.

Designing across ages: Multi-agent-based models and learning electricity

NASA Astrophysics Data System (ADS)

Sengupta, Pratim

Electricity is regarded as one of the most challenging topics for students at all levels -- middle school -- college (Cohen, Eylon, & Ganiel, 1983; Belcher & Olbert, 2003; Eylon & Ganiel, 1990; Steinberg et al., 1985). Several researchers have suggested that naive misconceptions about electricity stem from a deep incommensurability (Slotta & Chi, 2006; Chi, 2005) or incompatibility (Chi, Slotta & Leauw, 1994; Reiner, Slotta, Chi, & Resnick, 2000) between naive and expert knowledge structures. I first present an alternative theoretical framework that adopts an emergent levels-based perspective as proposed by Wilensky & Resnick (1999). From this perspective, macro-level phenomena such as electric current and resistance, as well as behavior of linear electric circuits, can be conceived of as emergent from simple, body-syntonic interactions between electrons and ions in a circuit. I argue that adopting such a perspective enables us to reconceive commonly noted misconceptions in electricity as behavioral evidences of "slippage between levels" -- i.e., these misconceptions appear when otherwise productive knowledge elements are sometimes inappropriately activated due to certain macro-level phenomenological cues only -- and, that the same knowledge elements when activated due to phenomenological cues at both micro- and macro-levels, can engender a deeper, expert-like understanding. I will then introduce NIELS (NetLogo Investigations In Electromagnetism, Sengupta & Wilensky, 2006, 2008, 2009), a low-threshold high-ceiling (LTHC) learning environment of multi-agent-based computational models that represent phenomena such as electric current and resistance, as well as the behavior of linear electric circuits, as emergent. I also present results from implementations of NIELS in 5th, 7th and 12th grade classrooms that show the following: (a) how leveraging certain "design elements" over others in NIELS models can create new phenomenological cues, which in turn can be appropriated for learners in different grades; (b) how learners' existing knowledge structures can be bootstrapped to generate deep understanding; (c) how these knowledge structures evolve as the learners progress through the implemented curriculum; (d) improvement of learners' understanding in the post-test compared to the pre-test; and (e) how NIELS students compare with a comparison group of 12th grade students who underwent traditional classroom instruction.

High pressure ices.

PubMed

Hermann, Andreas; Ashcroft, N W; Hoffmann, Roald

2012-01-17

H(2)O will be more resistant to metallization than previously thought. From computational evolutionary structure searches, we find a sequence of new stable and meta-stable structures for the ground state of ice in the 1-5 TPa (10 to 50 Mbar) regime, in the static approximation. The previously proposed Pbcm structure is superseded by a Pmc2(1) phase at p = 930 GPa, followed by a predicted transition to a P2(1) crystal structure at p = 1.3 TPa. This phase, featuring higher coordination at O and H, is stable over a wide pressure range, reaching 4.8 TPa. We analyze carefully the geometrical changes in the calculated structures, especially the buckling at the H in O-H-O motifs. All structures are insulating--chemistry burns a deep and (with pressure increase) lasting hole in the density of states near the highest occupied electronic levels of what might be component metallic lattices. Metallization of ice in our calculations occurs only near 4.8 TPa, where the metallic C2/m phase becomes most stable. In this regime, zero-point energies much larger than typical enthalpy differences suggest possible melting of the H sublattice, or even the entire crystal.

Structural characterization of the novel aminoglycoside phosphotransferase AphVIII from Streptomyces rimosus with enzymatic activity modulated by phosphorylation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boyko, Konstantin M., E-mail: kmb@inbi.ras.ru; National Research Center “Kurchatov Institute”, Kurchatov Complex of NBICS-technologies, Akad. Kurchatova sqr., 1, Moscow, 123182; Gorbacheva, Marina A.

2016-09-02

Aminoglycoside phosphotransferases represent a broad class of enzymes that promote bacterial resistance to aminoglycoside antibiotics via the phosphorylation of hydroxyl groups in the latter. Here we report the spatial structure of the 3′-aminoglycoside phosphotransferase of novel VIII class (AphVIII) solved by X-ray diffraction method with a resolution of 2.15 Å. Deep analysis of APHVIII structure and its comparison with known structures of aminoglycoside phosphotransferases of various types reveals that AphVIII has a typical two-domain fold and, however, possesses some unique characteristics that distinguish the enzyme from its known homologues. The most important difference is the presence of the activation loop withmore » unique Ser146 residue. We demonstrate that in the apo-state of the enzyme the activation loop does not interact with other parts of the enzyme and seems to adopt catalytically competent state only after substrate binding. - Highlights: • 3D structure of the novel aminoglycoside phosphotransferase AphVIII was obtained. • AphVIII activation loop is clearly identified in the electron density. • AphVIII has some unique structural features in its substrate C-ring binding pocket.« less

Embellishing Problem-Solving Examples with Deep Structure Information Facilitates Transfer

ERIC Educational Resources Information Center

Lee, Hee Seung; Betts, Shawn; Anderson, John R.

2017-01-01

Appreciation of problem structure is critical to successful learning. Two experiments investigated effective ways of communicating problem structure in a computer-based learning environment and tested whether verbal instruction is necessary to specify solution steps, when deep structure is already embellished by instructional examples.…

Joint inversion of lake-floor electrical resistivity tomography and boat-towed radio-magnetotelluric data illustrated on synthetic data and an application from the Äspö Hard Rock Laboratory site, Sweden

NASA Astrophysics Data System (ADS)

Wang, Shunguo; Kalscheuer, Thomas; Bastani, Mehrdad; Malehmir, Alireza; Pedersen, Laust B.; Dahlin, Torleif; Meqbel, Naser

2018-04-01

The electrical resistivity tomography (ERT) method provides moderately good constraints for both conductive and resistive structures, while the radio-magnetotelluric (RMT) method is well suited to constrain conductive structures. Additionally, RMT and ERT data may have different target coverage and are differently affected by various types of noise. Hence, joint inversion of RMT and ERT data sets may provide a better constrained model as compared to individual inversions. In this study, joint inversion of boat-towed RMT and lake-floor ERT data has for the first time been formulated and implemented. The implementation was tested on both synthetic and field data sets incorporating RMT transverse electrical mode and ERT data. Results from synthetic data demonstrate that the joint inversion yields models with better resolution compared with individual inversions. A case study from an area adjacent to the Äspö Hard Rock Laboratory (HRL) in southeastern Sweden was used to demonstrate the implementation of the method. A 790-m-long profile comprising lake-floor ERT and boat-towed RMT data combined with partial land data was used for this purpose. Joint inversions with and without weighting (applied to different data sets, vertical and horizontal model smoothness) as well as constrained joint inversions incorporating bathymetry data and water resistivity measurements were performed. The resulting models delineate subsurface structures such as a major northeasterly directed fracture system, which is observed in the HRL facility underground and confirmed by boreholes. A previously uncertain weakness zone, likely a fracture system in the northern part of the profile, is inferred in this study. The fractures are highly saturated with saline water, which make them good targets of resistivity-based geophysical methods. Nevertheless, conductive sediments overlain by the lake water add further difficulty to resolve these deep fracture zones. Therefore, the joint inversion of RMT and ERT data particularly helps to improve the resolution of the resistivity models in areas where the profile traverses shallow water and land sections. Our modification of the joint inversion of RMT and ERT data improves the study of geological units underneath shallow water bodies where underground infrastructures are planned. Thus, it allows better planning and mitigating the risks and costs associated with conductive weakness zones.

Characterization of Transparent Materials for Erosion Resistance

DTIC Science & Technology

1976-03-01

s. Fyall’s smooth annular depressions surrounding the central undamaged region were observed for Impact velocities up to 500 m/s when deep ring...Section III, however much remains to be learned about the correlation of fracture data with the transient stress distributions In the target...patches of shallow ripples several microns deep are randon y distributed over the surface of the uncoated polycarbonate analogous to those observed on

Hole-to-surface resistivity measurements at Gibson Dome (drill hole GD-1) Paradox basin, Utah

USGS Publications Warehouse

Daniels, J.J.

1984-01-01

Hole-to-surface resistivity measurements were made in a deep drill hole (GD-1), in San Juan County, Utah, which penetrated a sequence of sandstone, shale, and evaporite. These measurements were made as part of a larger investigation to study the suitability of an area centered around the Gibson Dome structure for nuclear waste disposal. The magnitude and direction of the total electric field resulting from a current source placed in a drill hole is calculated from potential difference measurements for a grid of closely-spaced stations. A contour map of these data provides a detailed map of the distribution of the electric field away from the drill hole. Computation of the apparent resistivity from the total electric field helps to interpret the data with respect to the ideal situation of a layered earth. Repeating the surface measurements for different source depths gives an indication of variations in the geoelectric section with depth. The quantitative interpretation of the field data at Gibson Dome was hindered by the pressure of a conductive borehole fluid. However, a qualitative interpretation of the field data indicates the geoelectric section around drill hole GD-1 is not perfectly layered. The geoelectric section appears to dip to the northwest, and contains anomalies in the resistivity distribution that may be representative of localized thickening or folding of the salt layers.

Lithospheric electrical structure of the middle Lhasa terrane in the south Tibetan plateau

NASA Astrophysics Data System (ADS)

Liang, Hongda; Jin, Sheng; Wei, Wenbo; Gao, Rui; Ye, Gaofeng; Zhang, Letian; Yin, Yaotian; Lu, Zhanwu

2018-04-01

The Lhasa terrane in southern Tibetan plateau is a huge tectono-magmatic belt and an important metallogenic belt. Its formation evolution process and mineralization are affected by the subduction of oceanic plate and subsequent continental collision. However, the evolution of Lhasa terrane has been a subject of much debate for a long time. The Lithospheric structure records the deep processes of the subduction of oceanic plate and continental collision. The magnetotelluric (MT) method can probe the sub-surface electrical conductivity, newly dense broadband and long period magnetotelluric data were collected along a south-north trending profile that across the Lhasa terrane at 88°-89°E. Dimensionality analyses demonstrated that the MT data can be interpreted using two-dimensional approaches, and the regional strike direction was determined as N110°E.Based on data analysis results, a two-dimensional (2-D) resistivity model of crust and upper mantle was derived from inversion of the transverse electric mode, transverse magnetic mode and vertical magnetic field data. Inversion model shows a large north-dipping resistor that extended from the upper crust to upper mantle beneath the Himalaya and the south of Lhasa Terrane, which may represent the subducting Indian continental lithosphere. The 31°N may be an important boundary in the Lhasa Terrane, the south performs a prominent high-conductivity anomaly from the lower crust to upper mantle which indicates the existence of asthenosphere upwelling, while the north performs a higher resistivity and may have a reworking ancient basement. The formation of the ore deposits in the study area may be related to the upwelling of the mantle material triggered by slab tearing and/or breaking off of the Indian lithosphere, and the mantle material input also contributed the total thickness of the present-day Tibetan crust. The results provide helpful constrains to understand the mechanism of the continent-continent collision and the regional exploratory prospect of the deep resources.

The pattern of deep structure and recent tectonics of the Greater Caucasus in the Ossetian sector from the complex geophysical data

NASA Astrophysics Data System (ADS)

Gorbatikov, A. V.; Rogozhin, E. A.; Stepanova, M. Yu.; Kharazova, Yu. V.; Andreeva, N. V.; Perederin, F. V.; Zaalishvili, V. B.; Mel'kov, D. A.; Dzeranov, B. V.; Dzeboev, B. A.; Gabaraev, A. F.

2015-01-01

Microseismic sounding along the profile in the Ossetian sector of the Greater Caucasus revealed two domains with characteristic properties and morphology deep beneath the mountain system. One subvertical domain is marked with low velocities and the other, also subvertical, has high velocities. The high-velocity zone is largely located beneath the northern limb and axial part of the Greater Caucasus mega-anticlinorium, whereas the low velocity zone projects on the southern limb. Almost throughout the entire structure of the block part of the northern limb of mega-anticlinorium, the top of the high-velocity zone beneath it is consistently horizontal at a depth of ˜10 km. This pattern is violated by the apparent steep rise of the top of the high-velocity zone to the surface in the southern direction, which starts approximately from the main thrust. Beneath the southern limb, the top boundary can also be guessed at a depth of ˜10 km, although less reliably. The roots of the low-velocity zone stretch to a depth of ˜50-60 km and narrow with the depth. The weak regional seismicity quite distinctly maps onto the high-velocity zone. In the depth interval of 10 to 25 km, weak seismicity abruptly drops northwards at the transition to the low-velocity zone. The independent magnetotelluric data show that electric resistivity of the low-velocity zone significantly exceeds the resistivity of the hosting rocks. The model of a medium filled with isolated fractures with mineralized fluid is suggested for the low-velocity zone. According to a series of features, the low-velocity zone tends to float up; in particular, there is a high lateral correlation between the most elevated part of the mountain relief, morphology, and age of the rocks, on one hand, and the position of the low-velocity zone, on the other hand.

A Comparison of Resistivity Imaging Techniques Using 1D, 2D and 3D MT Inversions in the Middle Rio Grande Rift, NM

NASA Astrophysics Data System (ADS)

Folsom, M.; Pepin, J.; Person, M. A.; Kelley, S.; Peacock, J.

2016-12-01

Twelve magnetotelluric (MT) soundings were collected along a 40 km profile crossing the Rio Grande rift and a portion of the Socorro Magma Body (SMB). A comparison of 1D, 2D and 3D inverse models highlight the strengths and weaknesses of the respective methods. 2D inversion results are distorted by the 3D nature of the data at longer periods, producing conductive artifacts at depths greater than 3 km. We demonstrate through a 3D forward modelling exercise how it is possible to recreate this effect by placing large resistive and conductive features off of an otherwise perfectly 2D resistivity model. Investigators that image deep conductors using 2D inversion codes should consider the influence of off-axis 3D features. Interpretation of the models currently show no indication of the SMB, but outlines the geometry of syn-rift and pre-rift sediments at the "Socorro Constriction", the southern terminus of the Albuquerque Basin. A strong, northward trending conductor 2-3 km deep and less than 2 ohm-m is coincident with the rift, creating a reversal of induction arrow direction at this point. This is interpreted as deep basin brines, perhaps influenced by evaporates hosted in the Permian Abo and Yeso formations. It has been noted that Rio Grande salinity increases in a stepwise manner, coincident with the terminal ends of sedimentary basins. Our geophysical models suggest a possible connection between rift-bounding faults and deep sedimentary brines, which likely impact the water quality of the Rio Grande. Future work includes adding additional MT stations to better constrain off-axis features and their relationship to the Rio Grande.

Electrical leakage phenomenon in heteroepitaxial cubic silicon carbide on silicon

NASA Astrophysics Data System (ADS)

Pradeepkumar, Aiswarya; Zielinski, Marcin; Bosi, Matteo; Verzellesi, Giovanni; Gaskill, D. Kurt; Iacopi, Francesca

2018-06-01

Heteroepitaxial 3C-SiC films on silicon substrates are of technological interest as enablers to integrate the excellent electrical, electronic, mechanical, thermal, and epitaxial properties of bulk silicon carbide into well-established silicon technologies. One critical bottleneck of this integration is the establishment of a stable and reliable electronic junction at the heteroepitaxial interface of the n-type SiC with the silicon substrate. We have thus investigated in detail the electrical and transport properties of heteroepitaxial cubic silicon carbide films grown via different methods on low-doped and high-resistivity silicon substrates by using van der Pauw Hall and transfer length measurements as test vehicles. We have found that Si and C intermixing upon or after growth, particularly by the diffusion of carbon into the silicon matrix, creates extensive interstitial carbon traps and hampers the formation of a stable rectifying or insulating junction at the SiC/Si interface. Although a reliable p-n junction may not be realistic in the SiC/Si system, we can achieve, from a point of view of the electrical isolation of in-plane SiC structures, leakage suppression through the substrate by using a high-resistivity silicon substrate coupled with deep recess etching in between the SiC structures.

Monitoring Interactions Inside Cells by Advanced Spectroscopies: Overview of Copper Transporters and Cisplatin.

PubMed

Lasorsa, Alessia; Natile, Giovanni; Rosato, Antonio; Tadini-Buoninsegni, Francesco; Arnesano, Fabio

2018-02-12

Resistance, either at the onset of the treatment or developed after an initial positive response, is a major limitation of antitumor therapy. In the case of platinum- based drugs, copper transporters have been found to interfere with drug trafficking by facilitating the import or favoring the platinum export and inactivation. The use of powerful spectroscopic, spectrometric and computational methods has allowed a deep structural insight into the mode of interaction of platinum drugs with the metal-binding domains of the transporter proteins. This review article focuses on the mode in which platinum drugs can compete with copper ion for binding to transport proteins and consequent structural and biological effects. Three types of transporters are discussed in detail: copper transporter 1 (Ctr1), the major responsible for Cu+ uptake; antioxidant-1 copper chaperone (Atox1), responsible for copper transfer within the cytoplasm; and copper ATPases (ATP7A/B), responsible for copper export into specific subcellular compartments and outside the cell. The body of knowledge summarized in this review can help in shaping current chemotherapy to optimize the efficacy of platinum drugs (particularly in relation to resistance) and to mitigate adverse effects on copper metabolism. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

Refractive Optics for Hard X-ray Transmission Microscopy

NASA Astrophysics Data System (ADS)

Simon, M.; Ahrens, G.; Last, A.; Mohr, J.; Nazmov, V.; Reznikova, E.; Voigt, A.

2011-09-01

For hard x-ray transmission microscopy at photon energies higher than 15 keV we design refractive condenser and imaging elements to be used with synchrotron light sources as well as with x-ray tube sources. The condenser lenses are optimized for low x-ray attenuation—resulting in apertures greater than 1 mm—and homogeneous intensity distribution on the detector plane, whereas the imaging enables high-resolution (<100 nm) full-field imaging. To obtain high image quality at reasonable exposure times, custom-tailored matched pairs of condenser and imaging lenses are being developed. The imaging lenses (compound refractive lenses, CRLs) are made of SU-8 negative resist by deep x-ray lithography. SU-8 shows high radiation stability. The fabrication technique enables high-quality lens structures regarding surface roughness and arrangement precision with arbitrary 2D geometry. To provide point foci, crossed pairs of lenses are used. Condenser lenses have been made utilizing deep x-ray lithographic patterning of thick SU-8 layers, too, whereas in this case, the aperture is limited due to process restrictions. Thus, in terms of large apertures, condenser lenses made of structured and rolled polyimide film are more attractive. Both condenser types, x-ray mosaic lenses and rolled x-ray prism lenses (RXPLs), are considered to be implemented into a microscope setup. The x-ray optical elements mentioned above are characterized with synchrotron radiation and x-ray laboratory sources, respectively.

Increased radiation resistance in lithium-counterdoped silicon solar cells

NASA Technical Reports Server (NTRS)

Weinberg, I.; Swartz, C. K.; Mehta, S.

1984-01-01

Lithium-counterdoped n(+)p silicon solar cells are found to exhibit significantly increased radiation resistance to 1-MeV electron irradiation when compared to boron-doped n(+)p silicon solar cells. In addition to improved radiation resistance, considerable damage recovery by annealing is observed in the counterdoped cells at T less than or equal to 100 C. Deep level transient spectroscopy measurements are used to identify the defect whose removal results in the low-temperature aneal. It is suggested that the increased radiation resistance of the counterdoped cells is primarily due to interaction of the lithium with interstitial oxygen.

Novel fingerprinting method characterises the necessary and sufficient structural connectivity from deep brain stimulation electrodes for a successful outcome

NASA Astrophysics Data System (ADS)

Fernandes, Henrique M.; Van Hartevelt, Tim J.; Boccard, Sandra G. J.; Owen, Sarah L. F.; Cabral, Joana; Deco, Gustavo; Green, Alex L.; Fitzgerald, James J.; Aziz, Tipu Z.; Kringelbach, Morten L.

2015-01-01

Deep brain stimulation (DBS) is a remarkably effective clinical tool, used primarily for movement disorders. DBS relies on precise targeting of specific brain regions to rebalance the oscillatory behaviour of whole-brain neural networks. Traditionally, DBS targeting has been based upon animal models (such as MPTP for Parkinson’s disease) but has also been the result of serendipity during human lesional neurosurgery. There are, however, no good animal models of psychiatric disorders such as depression and schizophrenia, and progress in this area has been slow. In this paper, we use advanced tractography combined with whole-brain anatomical parcellation to provide a rational foundation for identifying the connectivity ‘fingerprint’ of existing, successful DBS targets. This knowledge can then be used pre-surgically and even potentially for the discovery of novel targets. First, using data from our recent case series of cingulate DBS for patients with treatment-resistant chronic pain, we demonstrate how to identify the structural ‘fingerprints’ of existing successful and unsuccessful DBS targets in terms of their connectivity to other brain regions, as defined by the whole-brain anatomical parcellation. Second, we use a number of different strategies to identify the successful fingerprints of structural connectivity across four patients with successful outcomes compared with two patients with unsuccessful outcomes. This fingerprinting method can potentially be used pre-surgically to account for a patient’s individual connectivity and identify the best DBS target. Ultimately, our novel fingerprinting method could be combined with advanced whole-brain computational modelling of the spontaneous dynamics arising from the structural changes in disease, to provide new insights and potentially new targets for hitherto impenetrable neuropsychiatric disorders.

Electro-codeposition of Ni-SiO2 nanocomposite coatings from deep eutectic solvent with improved corrosion resistance

NASA Astrophysics Data System (ADS)

Li, Ruiqian; Hou, Yuanyuan; Liang, Jun

2016-03-01

Electro-codeposition of nano-sized SiO2 particles into the metal matrix in aqueous solution is generally difficult. In this paper, the nano-sized SiO2 particles were successfully codeposited in the Ni matrix from a choline chloride (ChCl)/ethylene glycol (EG) based deep eutectic solvent (DES) by pulse electro-codeposition. The effects of nano-sized SiO2 particles on electrochemical behaviour of Ni(II) were investigated. The microstructure, composition and corrosion resistance of pure Ni and Ni-SiO2 nanocomposite coatings were explored. Results showed that the SiO2 nanoparticles exhibited excellent dispersion stability in ChCl:2EG DES without any stabilizing additives and the presence of SiO2 nanoparticles have significant effects on the nucleation mechanism of Ni. The maximum content of SiO2 nanoparticles in composite coatings can achieve 4.69 wt.%, which closes to the level of co-deposition micro-sized SiO2 particles from aqueous solution. The Ni-SiO2 nanocomposite coatings exhibit much better corrosion resistance than pure Ni coating, and the corrosion resistance performance increases with increasing SiO2 content in the composite coatings.

Broadband Magnetotelluric Investigations of Crustal Resistivity Structure in North-Eastern Alberta: Implications for Engineered Geothermal Systems

NASA Astrophysics Data System (ADS)

Liddell, M. V.; Unsworth, M. J.; Nieuwenhuis, G.

2013-12-01

Greenhouse gas emissions from hydrocarbon consumption produce profound changes in the global climate, and the implementation of alternative energy sources is needed. The oilsands industry in Alberta (Canada) is a major producer of greenhouse gases as natural gas is burnt to produce the heat required to extract and process bitumen. Geothermal energy could be utilized to provide this necessary heat and has the potential to reduce both financial costs and environmental impacts of the oilsands industry. In order to determine the geothermal potential the details of the reservoir must be understood. Conventional hydrothermal reservoirs have been detected using geophysical techniques such as magnetotellurics (MT) which measures the electrical conductivity of the Earth. However, in Northern Alberta the geothermal gradient is relatively low, and heat must be extracted from deep inside the basement rocks using Engineered Geothermal Systems (EGS) and therefore an alternative exploration technique is required. MT can be useful in this context as it can detect fracture zones and regions of elevated porosity. MT data were recorded near Fort McMurray with the goal of determining the geothermal potential by understanding the crustal resistivity structure beneath the Athabasca Oilsands. The MT data are being used to locate targets of significance for geothermal exploration such as regions of low resistivity in the basement rocks which can relate to in situ fluids or fracture zones which can facilitate efficient heat extraction or het transport. A total of 93 stations were collected ~500m apart on two profiles stretching 30 and 20km respectively. Signals were recorded using Phoenix Geophysics V5-2000 systems over frequency bands from 1000 to 0.001 Hz, corresponding to depths of penetration approximately 50m to 50km. Groom-Bailey tensor decomposition and phase tensor analysis shows a well defined geoelectric strike direction that varied along the profile from N60°E to N45°E. Inversion of the data reveals the low resistivity sedimentary rocks of the Western Canadian Sedimentary Basin overlying a highly resistive Pre-Cambrian crystalline basement. The basement rocks have strong indications of being electrically anisotropic. Groom-Bailey and phase tensor azimuths are stable and consistent across both frequency and distance but display large phase tensor skew values (indicating 3D structure) and small induction vectors (indicating a lack of lateral structure). This type of anisotropy is unique because of its apparent widespread nature and the number of sites we have to constrain the anisotropic characteristics. These results can help to guide future geothermal development in Alberta as detailed information of the host rock resistivity structure can aid any EGS development.

RaptorX-Property: a web server for protein structure property prediction.

PubMed

Wang, Sheng; Li, Wei; Liu, Shiwang; Xu, Jinbo

2016-07-08

RaptorX Property (http://raptorx2.uchicago.edu/StructurePropertyPred/predict/) is a web server predicting structure property of a protein sequence without using any templates. It outperforms other servers, especially for proteins without close homologs in PDB or with very sparse sequence profile (i.e. carries little evolutionary information). This server employs a powerful in-house deep learning model DeepCNF (Deep Convolutional Neural Fields) to predict secondary structure (SS), solvent accessibility (ACC) and disorder regions (DISO). DeepCNF not only models complex sequence-structure relationship by a deep hierarchical architecture, but also interdependency between adjacent property labels. Our experimental results show that, tested on CASP10, CASP11 and the other benchmarks, this server can obtain ∼84% Q3 accuracy for 3-state SS, ∼72% Q8 accuracy for 8-state SS, ∼66% Q3 accuracy for 3-state solvent accessibility, and ∼0.89 area under the ROC curve (AUC) for disorder prediction. © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

76 FR 66078 - Notice of Industry Workshop on Technical and Regulatory Challenges in Deep and Ultra-Deep Outer...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-10-25

...-0087] Notice of Industry Workshop on Technical and Regulatory Challenges in Deep and Ultra-Deep Outer... and gas exploration and production in deep and ultra-deep OCS waters. Through this workshop, BSEE will... structured venue for consultation among offshore deepwater oil and gas industry and regulatory experts in...

MUFOLD-SS: New deep inception-inside-inception networks for protein secondary structure prediction.

PubMed

Fang, Chao; Shang, Yi; Xu, Dong

2018-05-01

Protein secondary structure prediction can provide important information for protein 3D structure prediction and protein functions. Deep learning offers a new opportunity to significantly improve prediction accuracy. In this article, a new deep neural network architecture, named the Deep inception-inside-inception (Deep3I) network, is proposed for protein secondary structure prediction and implemented as a software tool MUFOLD-SS. The input to MUFOLD-SS is a carefully designed feature matrix corresponding to the primary amino acid sequence of a protein, which consists of a rich set of information derived from individual amino acid, as well as the context of the protein sequence. Specifically, the feature matrix is a composition of physio-chemical properties of amino acids, PSI-BLAST profile, and HHBlits profile. MUFOLD-SS is composed of a sequence of nested inception modules and maps the input matrix to either eight states or three states of secondary structures. The architecture of MUFOLD-SS enables effective processing of local and global interactions between amino acids in making accurate prediction. In extensive experiments on multiple datasets, MUFOLD-SS outperformed the best existing methods and other deep neural networks significantly. MUFold-SS can be downloaded from http://dslsrv8.cs.missouri.edu/~cf797/MUFoldSS/download.html. © 2018 Wiley Periodicals, Inc.

The resistance to ionizing radiation of hyperthermophilic archaea isolated from deep-sea hydrothermal vents

NASA Astrophysics Data System (ADS)

Jolivet, E.; L'Haridon, S.; Corre, E.; Gérard, E.; Myllykallio, H.; Forterre, P.; Prieur, D.

2001-08-01

In this paper we present many results on radioresistance of hyperthermophilic archaeon isolated from deep-sea hydrothermal vents. Effects of gamma (γ) irradiation was first tested with Pyrococcus abyssi and showed that this micro-organism did not show any loss of viability until 2 kGy of γ-irradiation. Pulse Field Gel Electrophoresis (PFGE) analysis conducted with different species belonging to Archaea and Bacteria suggest that no specific DNA protection system exist that could explain the radioresistance of P. abyssi. Moreover, the genomic DNA completely fragmented after 2 kGy is fully restored in vivo under optimal growth conditions. The DNA replication or irradiated cells at 2,5 kGy is delayed by a lag phase which could coincide to this DNA repair. An associated mechanism of DNA repair by excision could act with the recombinational DNA repair. In parallel to these studies three hyperthermophilic archaeons highly resistant to ionizing radiation were isolated from deep-sea hydrothermal vents after the enrichment cultures were submitted to elevated irradiation doses (up to 20 and 30 kGy). All these novel species were more radioresistant than P. abyssi.

Improved Bilayer Resist System Using Contrast-Enhanced Lithography With Water-Soluble Photopolymer

NASA Astrophysics Data System (ADS)

Sasago, Masaru; Endo, Masayuki; Hirai, Yoshihiko; Ogawa, Kazufurni; Ishihara, Takeshi

1986-07-01

A new water-soluble contract enhanced material, WSP (Water-soluble Photopolymer), has been developed. The WSP is composed of a mainpolymer and a photobleachable reagents. The mainpolymer is a water-soluble polymer mixed with pullulan (refined through biotechnological process) and polyvinyl-pyrolidone (PVP). The photo-bleachable reagent is of a diazonium compound gorup. The introduction of the mainpolymer and photobleach-able reagent mixture has improved filmity, gas transparency, photobleaching characteristics and solubility in alkaline which are essential to the device fabrication. Submicron photoresist patterns are successfully fabricated by a simple sequence of photolithography process. The WSP layer has been applied to the bilayer resist system--deep-UV portable conformable masking (PCM)--that is not affected by VLSI's topography, and is able to fabricate highly accurate pattern. The aqueous developable layer, PMGI, with high organic solvent resistance is used in the bottom layer. Therefore, no interfacial mixing with conventional positive resist top layer is observed. Furthermore, deep-UV exposure method has been used for the KrF excimer laser optical system in order to increase high throughput. From the experiments, it has been confirmed that good resist transfer profile can be realized by the use of WSP, and that the submicron resist patterns with high aspect-ratio can be developed on the nonplaner wafer with steps of up to 41m by the combination of the WSP with the PCM system. By this technology, has been improved the weak point: variation in the line width due to the thickness of contrast-enhanced layer when the CEL technology is applied, and dependency of both the finished resist profile and the line-width accuracy on the thickness of the top layer resist when the PCM system is adopted.

The Transcriptome of Compatible and Incompatible Interactions of Potato (Solanum tuberosum) with Phytophthora infestans Revealed by DeepSAGE Analysis

PubMed Central

Gyetvai, Gabor; Sønderkær, Mads; Göbel, Ulrike; Basekow, Rico; Ballvora, Agim; Imhoff, Maren; Kersten, Birgit; Nielsen, Kåre-Lehman; Gebhardt, Christiane

2012-01-01

Late blight, caused by the oomycete Phytophthora infestans, is the most important disease of potato (Solanum tuberosum). Understanding the molecular basis of resistance and susceptibility to late blight is therefore highly relevant for developing resistant cultivars, either by marker-assissted selection or by transgenic approaches. Specific P. infestans races having the Avr1 effector gene trigger a hypersensitive resistance response in potato plants carrying the R1 resistance gene (incompatible interaction) and cause disease in plants lacking R1 (compatible interaction). The transcriptomes of the compatible and incompatible interaction were captured by DeepSAGE analysis of 44 biological samples comprising five genotypes, differing only by the presence or absence of the R1 transgene, three infection time points and three biological replicates. 30.859 unique 21 base pair sequence tags were obtained, one third of which did not match any known potato transcript sequence. Two third of the tags were expressed at low frequency (<10 tag counts/million). 20.470 unitags matched to approximately twelve thousand potato transcribed genes. Tag frequencies were compared between compatible and incompatible interactions over the infection time course and between compatible and incompatible genotypes. Transcriptional changes were more numerous in compatible than in incompatible interactions. In contrast to incompatible interactions, transcriptional changes in the compatible interaction were observed predominantly for multigene families encoding defense response genes and genes functional in photosynthesis and CO2 fixation. Numerous transcriptional differences were also observed between near isogenic genotypes prior to infection with P. infestans. Our DeepSAGE transcriptome analysis uncovered novel candidate genes for plant host pathogen interactions, examples of which are discussed with respect to possible function. PMID:22328937

Nonthermal ablation with microbubble-enhanced focused ultrasound close to the optic tract without affecting nerve function.

PubMed

McDannold, Nathan; Zhang, Yong-Zhi; Power, Chanikarn; Jolesz, Ferenc; Vykhodtseva, Natalia

2013-11-01

Tumors at the skull base are challenging for both resection and radiosurgery given the presence of critical adjacent structures, such as cranial nerves, blood vessels, and brainstem. Magnetic resonance imaging-guided thermal ablation via laser or other methods has been evaluated as a minimally invasive alternative to these techniques in the brain. Focused ultrasound (FUS) offers a noninvasive method of thermal ablation; however, skull heating limits currently available technology to ablation at regions distant from the skull bone. Here, the authors evaluated a method that circumvents this problem by combining the FUS exposures with injected microbubble-based ultrasound contrast agent. These microbubbles concentrate the ultrasound-induced effects on the vasculature, enabling an ablation method that does not cause significant heating of the brain or skull. In 29 rats, a 525-kHz FUS transducer was used to ablate tissue structures at the skull base that were centered on or adjacent to the optic tract or chiasm. Low-intensity, low-duty-cycle ultrasound exposures (sonications) were applied for 5 minutes after intravenous injection of an ultrasound contrast agent (Definity, Lantheus Medical Imaging Inc.). Using histological analysis and visual evoked potential (VEP) measurements, the authors determined whether structural or functional damage was induced in the optic tract or chiasm. Overall, while the sonications produced a well-defined lesion in the gray matter targets, the adjacent tract and chiasm had comparatively little or no damage. No significant changes (p > 0.05) were found in the magnitude or latency of the VEP recordings, either immediately after sonication or at later times up to 4 weeks after sonication, and no delayed effects were evident in the histological features of the optic nerve and retina. This technique, which selectively targets the intravascular microbubbles, appears to be a promising method of noninvasively producing sharply demarcated lesions in deep brain structures while preserving function in adjacent nerves. Because of low vascularity--and thus a low microbubble concentration--some large white matter tracts appear to have some natural resistance to this type of ablation compared with gray matter. While future work is needed to develop methods of monitoring the procedure and establishing its safety at deep brain targets, the technique does appear to be a potential solution that allows FUS ablation of deep brain targets while sparing adjacent nerve structures.

Nonthermal ablation with microbubble-enhanced focused ultrasound close to the optic tract without affecting nerve function

PubMed Central

McDannold, Nathan; Zhang, Yong-Zhi; Power, Chanikarn; Jolesz, Ferenc; Vykhodtseva, Natalia

2014-01-01

Object Tumors at the skull base are challenging for both resection and radiosurgery given the presence of critical adjacent structures, such as cranial nerves, blood vessels, and brainstem. Magnetic resonance imaging–guided thermal ablation via laser or other methods has been evaluated as a minimally invasive alternative to these techniques in the brain. Focused ultrasound (FUS) offers a noninvasive method of thermal ablation; however, skull heating limits currently available technology to ablation at regions distant from the skull bone. Here, the authors evaluated a method that circumvents this problem by combining the FUS exposures with injected microbubble-based ultrasound contrast agent. These microbubbles concentrate the ultrasound-induced effects on the vasculature, enabling an ablation method that does not cause significant heating of the brain or skull. Methods In 29 rats, a 525-kHz FUS transducer was used to ablate tissue structures at the skull base that were centered on or adjacent to the optic tract or chiasm. Low-intensity, low-duty-cycle ultrasound exposures (sonications) were applied for 5 minutes after intravenous injection of an ultrasound contrast agent (Definity, Lantheus Medical Imaging Inc.). Using histological analysis and visual evoked potential (VEP) measurements, the authors determined whether structural or functional damage was induced in the optic tract or chiasm. Results Overall, while the sonications produced a well-defined lesion in the gray matter targets, the adjacent tract and chiasm had comparatively little or no damage. No significant changes (p > 0.05) were found in the magnitude or latency of the VEP recordings, either immediately after sonication or at later times up to 4 weeks after sonication, and no delayed effects were evident in the histological features of the optic nerve and retina. Conclusions This technique, which selectively targets the intravascular microbubbles, appears to be a promising method of noninvasively producing sharply demarcated lesions in deep brain structures while preserving function in adjacent nerves. Because of low vascularity—and thus a low microbubble concentration—some large white matter tracts appear to have some natural resistance to this type of ablation compared with gray matter. While future work is needed to develop methods of monitoring the procedure and establishing its safety at deep brain targets, the technique does appear to be a potential solution that allows FUS ablation of deep brain targets while sparing adjacent nerve structures. PMID:24010975

Recent studies of time variations of natural electromagnetic fields in Scotland

NASA Astrophysics Data System (ADS)

Hutton, V. R. S.; Dawes, G.; Ingham, M.; Kirkwood, S.; Mbipom, E. W.; Sik, J.

1981-01-01

A series of geomagnetic induction studies has been undertaken in Scotland since 1973. It includes the operation of two geomagnetic arrays, one over northern Scotland and the other over southern Scotland, subsequent individual station and small-scale geomagnetic array studies, and three sets of magnetotelluric soundings which traverse Scotland from the Lewisian Foreland to the English border. The problems associated with the interpretation of induction data from an island located in the subauroral region are discussed qualitatively and the manner in which both coast and source field effects can be accounted for, is described. The geomagnetic deep sounding data (GDS) from all the observation sites have been collated, and examples of hypothetical event contour maps and traverses across the Great Glen and of individual events from the northern array are presented. They indicate that significant lateral variations in electrical conductivity structure within the crust and upper mantle are associated with the major geological faults in the region. Examples of the results of the magnetotelluric soundings are also presented, together with an outline of the procedure used for one- and two-dimensional modelling. Models of the geo-electric structure in both northern and southern Scotland have been obtained. These show distinctive features which are compatible with the qualitative interpretation of the magnetovariational data. For example, the major granitic blocks are highly resistive while regions of relatively low resistivity exist at upper crustal depths near the Great Glen, Highland boundary and Southern Uplands faults. A zone of low resistivity exists at lower crust-uppermost mantle depths throughout much of the region, the lowest value occurring under the Southern Uplands.

Impact of Tropopause Structures on Deep Convective Transport Observed during MACPEX

NASA Astrophysics Data System (ADS)

Mullendore, G. L.; Bigelbach, B. C.; Christensen, L. E.; Maddox, E.; Pinkney, K.; Wagner, S.

2016-12-01

Deep convection is the most efficient method of transporting boundary layer mass to the upper troposphere and stratosphere (UTLS). The Mid-latitude Airborne Cirrus Properties Experiment (MACPEX) was conducted during April of 2011 over the central U.S. With a focus on cirrus clouds, the campaign flights often sampled large cirrus anvils downstream from deep convection and included an extensive observational suite of chemical measurements on a high altitude aircraft. As double-tropopause structures are a common feature in the central U.S. during the springtime, the MACPEX campaign provides a good opportunity to gather cases of deep convective transport in the context of both single and double tropopause structures. Sampling of chemical plumes well downstream from convection allows for sampling in relatively quiescent conditions and analysis of irreversible transport. The analysis presented includes multiple methods to assess air mass source and possible convective processing, including back trajectories and ratios of chemical concentrations. Although missions were flown downstream of deep convection, recent processing by convection does not seem likely in all cases that high altitude carbon monoxide plumes were observed. Additionally, the impact of single and double tropopause structures on deep convective transport is shown to be strongly dependent on high stability layers.

[Obsessive-compulsive disorder, a new model of basal ganglia dysfunction? Elements from deep brain stimulation studies].

PubMed

Haynes, W I A; Millet, B; Mallet, L

2012-01-01

Deep brain stimulation was first developed for movement disorders but is now being offered as a therapeutic alternative in severe psychiatric disorders after the failure of conventional therapies. One of such pathologies is obsessive-compulsive disorder. This disorder which associates intrusive thoughts (obsessions) and repetitive irrepressible rituals (compulsions) is characterized by a dysfunction of a cortico-subcortical loop. After having reviewed the pathophysiological evidence to show why deep brain stimulation was an interesting path to take for severe and resistant cases of obsessive-compulsive disorder, we will present the results of the different clinical trials. Finally, we will provide possible mechanisms for the effects of deep brain stimulation in this pathology. Copyright © 2012 Elsevier Masson SAS. All rights reserved.

Study of the optimum level of electrode placement for the evaluation of absolute lung resistivity with the Mk3.5 EIT system.

PubMed

Nebuya, S; Noshiro, M; Yonemoto, A; Tateno, S; Brown, B H; Smallwood, R H; Milnes, P

2006-05-01

Inter-subject variability has caused the majority of previous electrical impedance tomography (EIT) techniques to focus on the derivation of relative or difference measures of in vivo tissue resistivity. Implicit in these techniques is the requirement for a reference or previously defined data set. This study assesses the accuracy and optimum electrode placement strategy for a recently developed method which estimates an absolute value of organ resistivity without recourse to a reference data set. Since this measurement of tissue resistivity is absolute, in Ohm metres, it should be possible to use EIT measurements for the objective diagnosis of lung diseases such as pulmonary oedema and emphysema. However, the stability and reproducibility of the method have not yet been investigated fully. To investigate these problems, this study used a Sheffield Mk3.5 system which was configured to operate with eight measurement electrodes. As a result of this study, the absolute resistivity measurement was found to be insensitive to the electrode level between 4 and 5 cm above the xiphoid process. The level of the electrode plane was varied between 2 cm and 7 cm above the xiphoid process. Absolute lung resistivity in 18 normal subjects (age 22.6 +/- 4.9, height 169.1 +/- 5.7 cm, weight 60.6 +/- 4.5 kg, body mass index 21.2 +/- 1.6: mean +/- standard deviation) was measured during both normal and deep breathing for 1 min. Three sets of measurements were made over a period of several days on each of nine of the normal male subjects. No significant differences in absolute lung resistivity were found, either during normal tidal breathing between the electrode levels of 4 and 5 cm (9.3 +/- 2.4 Omega m, 9.6 +/- 1.9 Omega m at 4 and 5 cm, respectively: mean +/- standard deviation) or during deep breathing between the electrode levels of 4 and 5 cm (10.9 +/- 2.9 Omega m and 11.1 +/- 2.3 Omega m, respectively: mean +/- standard deviation). However, the differences in absolute lung resistivity between normal and deep tidal breathing at the same electrode level are significant. No significant difference was found in the coefficient of variation between the electrode levels of 4 and 5 cm (9.5 +/- 3.6%, 8.5 +/- 3.2% at 4 and 5 cm, respectively: mean +/- standard deviation in individual subjects). Therefore, the electrode levels of 4 and 5 cm above the xiphoid process showed reasonable reliability in the measurement of absolute lung resistivity both among individuals and over time.

Automatic feature learning using multichannel ROI based on deep structured algorithms for computerized lung cancer diagnosis.

PubMed

Sun, Wenqing; Zheng, Bin; Qian, Wei

2017-10-01

This study aimed to analyze the ability of extracting automatically generated features using deep structured algorithms in lung nodule CT image diagnosis, and compare its performance with traditional computer aided diagnosis (CADx) systems using hand-crafted features. All of the 1018 cases were acquired from Lung Image Database Consortium (LIDC) public lung cancer database. The nodules were segmented according to four radiologists' markings, and 13,668 samples were generated by rotating every slice of nodule images. Three multichannel ROI based deep structured algorithms were designed and implemented in this study: convolutional neural network (CNN), deep belief network (DBN), and stacked denoising autoencoder (SDAE). For the comparison purpose, we also implemented a CADx system using hand-crafted features including density features, texture features and morphological features. The performance of every scheme was evaluated by using a 10-fold cross-validation method and an assessment index of the area under the receiver operating characteristic curve (AUC). The observed highest area under the curve (AUC) was 0.899±0.018 achieved by CNN, which was significantly higher than traditional CADx with the AUC=0.848±0.026. The results from DBN was also slightly higher than CADx, while SDAE was slightly lower. By visualizing the automatic generated features, we found some meaningful detectors like curvy stroke detectors from deep structured schemes. The study results showed the deep structured algorithms with automatically generated features can achieve desirable performance in lung nodule diagnosis. With well-tuned parameters and large enough dataset, the deep learning algorithms can have better performance than current popular CADx. We believe the deep learning algorithms with similar data preprocessing procedure can be used in other medical image analysis areas as well. Copyright © 2017. Published by Elsevier Ltd.

75 FR 63037 - General Pulaski Memorial Day, 2010

Federal Register 2010, 2011, 2012, 2013, 2014

2010-10-13

... resist subjugation. During his subsequent exile to France, he learned of our nascent struggle for... solemn obligations to each other's security and our shared values, including a deep and abiding...

2D joint inversion of dc and scalar audio-magnetotelluric data in the evaluation of low enthalpy geothermal fields

NASA Astrophysics Data System (ADS)

Monteiro Santos, Fernando A.; Afonso, António R. Andrade; Dupis, André

2007-03-01

Audio-magnetotelluric (AMT) and resistivity (dc) surveys are often used in environmental, hydrological and geothermal evaluation. The separate interpretation of those geophysical data sets assuming two-dimensional models frequently produces ambiguous results. The joint inversion of AMT and dc data is advocated by several authors as an efficient method for reducing the ambiguity inherent to each of those methods. This paper presents results obtained from the two-dimensional joint inversion of dipole-dipole and scalar AMT data acquired in a low enthalpy geothermal field situated in a graben. The joint inverted models show a better definition of shallow and deep structures. The results show that the extension of the benefits using joint inversion depends on the number and spacing of the AMT sites. The models obtained from experimental data display a low resistivity zone (<20 Ω m) in the central part of the graben that was correlated with the geothermal reservoir. The resistivity distribution models were used to estimate the distribution of the porosity in the geothermal reservoir applying two different approaches and considering the clay minerals effect. The results suggest that the maximum porosity of the reservoir is not uniform and might be in the range of 12% to 24%.

Investigation of the degradation-retarding effect caused by the low swelling capacity of a novel hyaluronic Acid filler developed by solid-phase crosslinking technology.

PubMed

Park, Sunyoung; Park, Kui Young; Yeo, In Kwon; Cho, Sung Yeon; Ah, Young Chang; Koh, Hyun Ju; Park, Won Seok; Kim, Beom Joon

2014-06-01

A variety of hyaluronic acid (HA) fillers demonstrate unique physical characteristics, which affect the quality of the HA filler products. The critical factors that affect the degradation of HA gels have not yet been determined. Our objective was to determine the characteristics of HA gels that affect their resistance to the degradation caused by radicals and enzymes. Three types of HA fillers for repairing deep wrinkles, Juvederm Ultra Plus (J-U), Restylane Perlane (Perlane), and Cleviel, were tested in this study. The resistance of these HA fillers to enzymatic degradation was measured by carbazole and displacement assays using hyaluronidase as the enzyme. The resistance of these fillers to radical degradation was measured by the displacement assay using H2O2. Different tests for evaluating the degradation resistance of HA gels can yield different results. The filler most susceptible to enzymatic degradation was J-U, followed by Perlane and Cleviel. The HA filler showing the highest degree of degradation caused by H2O2 treatment was Perlane, followed by J-U, and then Cleviel. Cleviel showed higher enzymatic and radical resistances than J-U and Perlane did. Furthermore, it exhibited the highest resistance to heat and the lowest swelling ratio among all the fillers that were examined. The main factor determining the degradation of HA particles is the gel swelling ratio, which is related to the particle structure of the gel. Our in vitro assays suggest that the decrease in the swelling ratio will lead to a retarding effect on the degradation of HA fillers.

Expression of Small RNA in Aphis gossypii and Its Potential Role in the Resistance Interaction with Melon

PubMed Central

Sattar, Sampurna; Anstead, James A.; Sunkar, Ramanjulu; Thompson, Gary A.

2012-01-01

Background The regulatory role of small RNAs (sRNAs) in various biological processes is an active area of investigation; however, there has been limited information available on the role of sRNAs in plant-insect interactions. This study was designed to identify sRNAs in cotton-melon aphid (Aphis gossypii) during the Vat-mediated resistance interaction with melon (Cucumis melo). Methodology/Principal Findings The role of miRNAs was investigated in response to aphid herbivory, during both resistant and susceptible interactions. sRNA libraries made from A. gossypii tissues feeding on Vat+ and Vat− plants revealed an unexpected abundance of 27 nt long sRNA sequences in the aphids feeding on Vat+ plants. Eighty-one conserved microRNAs (miRNAs), twelve aphid-specific miRNAs, and nine novel candidate miRNAs were also identified. Plant miRNAs found in the aphid libraries were most likely ingested during phloem feeding. The presence of novel miRNAs was verified by qPCR experiments in both resistant Vat+ and susceptible Vat− interactions. The comparative analyses revealed that novel miRNAs were differentially regulated during the resistant and susceptible interactions. Gene targets predicted for the miRNAs identified in this study by in silico analyses revealed their involvement in morphogenesis and anatomical structure determination, signal transduction pathways, cell differentiation and catabolic processes. Conclusion/Significance In this study, conserved and novel miRNAs were reported in A. gossypii. Deep sequencing data showed differences in the abundance of miRNAs and piRNA-like sequences in A. gossypii. Quantitative RT-PCR revealed that A. gossypii miRNAs were differentially regulated during resistant and susceptible interactions. Aphids can also ingest plant miRNAs during phloem feeding that are stable in the insect. PMID:23173035

A Deep Learning Network Approach to ab initio Protein Secondary Structure Prediction

PubMed Central

Spencer, Matt; Eickholt, Jesse; Cheng, Jianlin

2014-01-01

Ab initio protein secondary structure (SS) predictions are utilized to generate tertiary structure predictions, which are increasingly demanded due to the rapid discovery of proteins. Although recent developments have slightly exceeded previous methods of SS prediction, accuracy has stagnated around 80% and many wonder if prediction cannot be advanced beyond this ceiling. Disciplines that have traditionally employed neural networks are experimenting with novel deep learning techniques in attempts to stimulate progress. Since neural networks have historically played an important role in SS prediction, we wanted to determine whether deep learning could contribute to the advancement of this field as well. We developed an SS predictor that makes use of the position-specific scoring matrix generated by PSI-BLAST and deep learning network architectures, which we call DNSS. Graphical processing units and CUDA software optimize the deep network architecture and efficiently train the deep networks. Optimal parameters for the training process were determined, and a workflow comprising three separately trained deep networks was constructed in order to make refined predictions. This deep learning network approach was used to predict SS for a fully independent test data set of 198 proteins, achieving a Q3 accuracy of 80.7% and a Sov accuracy of 74.2%. PMID:25750595

A Deep Learning Network Approach to ab initio Protein Secondary Structure Prediction.

PubMed

Spencer, Matt; Eickholt, Jesse; Jianlin Cheng

2015-01-01

Ab initio protein secondary structure (SS) predictions are utilized to generate tertiary structure predictions, which are increasingly demanded due to the rapid discovery of proteins. Although recent developments have slightly exceeded previous methods of SS prediction, accuracy has stagnated around 80 percent and many wonder if prediction cannot be advanced beyond this ceiling. Disciplines that have traditionally employed neural networks are experimenting with novel deep learning techniques in attempts to stimulate progress. Since neural networks have historically played an important role in SS prediction, we wanted to determine whether deep learning could contribute to the advancement of this field as well. We developed an SS predictor that makes use of the position-specific scoring matrix generated by PSI-BLAST and deep learning network architectures, which we call DNSS. Graphical processing units and CUDA software optimize the deep network architecture and efficiently train the deep networks. Optimal parameters for the training process were determined, and a workflow comprising three separately trained deep networks was constructed in order to make refined predictions. This deep learning network approach was used to predict SS for a fully independent test dataset of 198 proteins, achieving a Q3 accuracy of 80.7 percent and a Sov accuracy of 74.2 percent.

Function and structure of the deep cervical extensor muscles in patients with neck pain.

PubMed

Schomacher, Jochen; Falla, Deborah

2013-10-01

The deep cervical extensors are anatomically able to control segmental movements of the cervical spine in concert with the deep cervical flexors. Several investigations have confirmed changes in cervical flexor muscle control in patients with neck pain and as a result, effective evidence-based therapeutic exercises have been developed to address such dysfunctions. However, knowledge on how the deep extensor muscles behave in patients with neck pain disorders is scare. Structural changes such as higher concentration of fat within the muscle, variable cross-sectional area and higher proportions of type II fibres have been observed in the deep cervical extensors of patients with neck pain compared to healthy controls. These findings suggest that the behaviour of the deep extensors may be altered in patients with neck pain. Consistent with this hypothesis, a recent series of studies confirm that patients display reduced activation of the deep cervical extensors as well as less defined activation patterns. This article provides an overview of the various different structural and functional changes in the deep neck extensor muscles documented in patients with neck pain. Relevant recommendations for the management of muscle dysfunction in patients with neck pain are presented. Copyright © 2013 Elsevier Ltd. All rights reserved.

DeepNeuron: an open deep learning toolbox for neuron tracing.

PubMed

Zhou, Zhi; Kuo, Hsien-Chi; Peng, Hanchuan; Long, Fuhui

2018-06-06

Reconstructing three-dimensional (3D) morphology of neurons is essential for understanding brain structures and functions. Over the past decades, a number of neuron tracing tools including manual, semiautomatic, and fully automatic approaches have been developed to extract and analyze 3D neuronal structures. Nevertheless, most of them were developed based on coding certain rules to extract and connect structural components of a neuron, showing limited performance on complicated neuron morphology. Recently, deep learning outperforms many other machine learning methods in a wide range of image analysis and computer vision tasks. Here we developed a new Open Source toolbox, DeepNeuron, which uses deep learning networks to learn features and rules from data and trace neuron morphology in light microscopy images. DeepNeuron provides a family of modules to solve basic yet challenging problems in neuron tracing. These problems include but not limited to: (1) detecting neuron signal under different image conditions, (2) connecting neuronal signals into tree(s), (3) pruning and refining tree morphology, (4) quantifying the quality of morphology, and (5) classifying dendrites and axons in real time. We have tested DeepNeuron using light microscopy images including bright-field and confocal images of human and mouse brain, on which DeepNeuron demonstrates robustness and accuracy in neuron tracing.

Analysis and seismic tests of composite shear walls with CFST columns and steel plate deep beams

NASA Astrophysics Data System (ADS)

Dong, Hongying; Cao, Wanlin; Wu, Haipeng; Zhang, Jianwei; Xu, Fangfang

2013-12-01

A composite shear wall concept based on concrete filled steel tube (CFST) columns and steel plate (SP) deep beams is proposed and examined in this study. The new wall is composed of three different energy dissipation elements: CFST columns; SP deep beams; and reinforced concrete (RC) strips. The RC strips are intended to allow the core structural elements — the CFST columns and SP deep beams — to work as a single structure to consume energy. Six specimens of different configurations were tested under cyclic loading. The resulting data are analyzed herein. In addition, numerical simulations of the stress and damage processes for each specimen were carried out, and simulations were completed for a range of location and span-height ratio variations for the SP beams. The simulations show good agreement with the test results. The core structure exhibits a ductile yielding mechanism characteristic of strong column-weak beam structures, hysteretic curves are plump and the composite shear wall exhibits several seismic defense lines. The deformation of the shear wall specimens with encased CFST column and SP deep beam design appears to be closer to that of entire shear walls. Establishing optimal design parameters for the configuration of SP deep beams is pivotal to the best seismic behavior of the wall. The new composite shear wall is therefore suitable for use in the seismic design of building structures.

Hot, deep origin of petroleum: deep basin evidence and application

USGS Publications Warehouse

Price, Leigh C.

1978-01-01

Use of the model of a hot deep origin of oil places rigid constraints on the migration and entrapment of crude oil. Specifically, oil originating from depth migrates vertically up faults and is emplaced in traps at shallower depths. Review of petroleum-producing basins worldwide shows oil occurrence in these basins conforms to the restraints of and therefore supports the hypothesis. Most of the world's oil is found in the very deepest sedimentary basins, and production over or adjacent to the deep basin is cut by or directly updip from faults dipping into the basin deep. Generally the greater the fault throw the greater the reserves. Fault-block highs next to deep sedimentary troughs are the best target areas by the present concept. Traps along major basin-forming faults are quite prospective. The structural style of a basin governs the distribution, types, and amounts of hydrocarbons expected and hence the exploration strategy. Production in delta depocenters (Niger) is in structures cut by or updip from major growth faults, and structures not associated with such faults are barren. Production in block fault basins is on horsts next to deep sedimentary troughs (Sirte, North Sea). In basins whose sediment thickness, structure and geologic history are known to a moderate degree, the main oil occurrences can be specifically predicted by analysis of fault systems and possible hydrocarbon migration routes. Use of the concept permits the identification of significant targets which have either been downgraded or ignored in the past, such as production in or just updip from thrust belts, stratigraphic traps over the deep basin associated with major faulting, production over the basin deep, and regional stratigraphic trapping updip from established production along major fault zones.

Stochastic Representation and Uncertainty Assessment of a Deep Geothermal Reservoir Using Cross-Borehole ERT: A 3D Synthetic Case

NASA Astrophysics Data System (ADS)

Brunet, P.; Gloaguen, E.

2014-12-01

Designing and monitoring of geothermal systems is a complex task which requires a multidisciplinary approach. Deep geothermal reservoir models are prone to greater uncertainty, with a lack of direct data and lower resolution of surface geophysical methods. However, recent technical advances have enabled the potential use of permanent downhole vertical resistivity arrays for monitoring fluid injection. As electrical resistivity is sensitive to temperature changes, such data could provide valuable information for deep geothermal reservoir characterization. The objective of this study is to assess the potential of time-lapse cross-borehole ERT to constrain 3D realizations of geothermal reservoir properties. The synthetic case of a permeable geothermal reservoir in a sedimentary basin was set up, as a confined deep and saline sandstone aquifer with intermediate reservoir temperatures (150ºC), depth (1 km) and 30m thickness. The reservoir permeability distribution is heterogeneous, as the result of a fluvial depositional environment. The ERT monitoring system design is a triangular arrangement of 3 wells at 150 m spacing, including 1 injection and 1 extraction well. The optimal number and spacing of electrodes of the ERT array design is site-specific and has been assessed through a sensibility study. Dipole-dipole and pole-pole electrode configurations were used. The study workflow was the following: 1) Generation of a reference reservoir model and 100 stochastic realizations of permeability; 2) Simulation of saturated single-phase flow and heat transport of reinjection of cooled formation fluid (50ºC) with TOUGH2 software; 3) Time-lapse forward ERT modeling on the reference model and all realizations (observed and simulated apparent resistivity change); 4) heuristic optimization on ERT computed and calculated data. Preliminary results show significant reduction of parameter uncertainty, hence realization space, with assimilation of cross-borehole ERT data. Loss in sensitivity of ERT between boreholes is compensated here by the stochastic modeling approach, rather than using a deterministic inversion scheme. Our results suggest stochastic reservoir simulations, together with assimilation of cross-borehole ERT data, could be useful tools for design and monitoring of deep geothermal systems.

Data integration and conceptual modelling of the Larderello geothermal area, Italy

NASA Astrophysics Data System (ADS)

Manzella, Adele; Gola, Gianluca; Bertini, Giovanni; Bonini, Marco; Botteghi, Serena; Brogi, Andrea; De Franco, Roberto; Dini, Andrea; Donato, Assunta; Gianelli, Giovanni; Liotta, Domenico; Montanari, Domenico; Montegrossi, Giordano; Petracchini, Lorenzo; Ruggieri, Giovanni; Santilano, Alessandro; Scrocca, Davide; Trumpy, Eugenio

2017-04-01

The Larderello geothermal field, located in southern Tuscany (Italy), is one of the most important long-living hydrothermal system in the world. The inner zone of the Northern Apennines is characterized by high heat flow, well constrained by several hundred measurements deriving from both shallow boreholes and deep exploration wells. It is widely accepted that the interplay among extensional tectonics, thinning of the previously overthickened crust and lithosphere, and magmatism related to crustal melting and hybridism, controlled the NW-SE trending geothermal anomaly occurring in southern Tuscany. At Larderello, the geothermal exploitation started at the beginning of the last century from the shallow evaporite-carbonate reservoir (about 700 - 1000 m b.g.l. on average) hosting a super-heated steam with temperature ranging from 150°C to 260°C. A deep exploration program was carried out in the early 1980s. Deep boreholes found a super-heated steam-dominated system hosted in the metamorphic basement (about 2500 - 4000 m b.g.l), characterized by temperatures ranging from 300°C to 350°C. In the SW part of the Larderello area (Lago locality), a temperature exceeding 400°C was measured down to 3000 m b.s.l. The 2D and 3D seismic exploration activities provided evidences of a seismic marker, locally showing bright spot features, defining the top of a deeper reflective crustal interval, named as "K-horizon". The K-horizon has not yet been drilled, but some boreholes approached it. This seismic reflector exhibits interesting positive correlation with the maximum peak of the hypocentre distribution of low-magnitude earthquakes and, at the same time, its shape coincides with the thermal anomaly distribution, in plain view. The review and updating of the velocity and resistivity models suggest the existence of over-pressurized fluids, likely of magmatic and/or thermo-metamorphic origin, which originate the seismic velocity anomalies. The upward migration and storage of the fluids can be controlled by: i) structural conduits crossing a multi-layered crust affected by magmatic intrusions; ii) mechanisms controlling the fluid migration in different rheological settings; and iii) self-sealing processes of magmatic hypersaline fluids arising from the brittle/ductile transition. Our study is addressed to the better understanding of the structure of the deepest part of the Larderello geothermal field, by integrating structural, geological, geochemical and geophysical data. Based on downward temperature extrapolation, fluid inclusions and geothermometers analyses, the possible occurrence of super-hot fluids, in supercritical conditions, nearby the K-horizon is envisaged. The final goal is to achieve a comprehensive understanding of the geological structure and the physical conditions (pressure and temperature) of the deep reservoir including also the zone corresponding to the K-horizon, to characterize the supercritical geothermal system as well as the deep crustal processes that work in synergy leading to the regional anomaly.

Use of geophysical methods to characterize groundwater in karstic rocks near Puerto Morelos, Yucatan Peninsula, Mexico

NASA Astrophysics Data System (ADS)

cerda Garcia, C. G.; Carpenter, P. J.; Leal-Bautista, R. M.

2017-12-01

Geophysical surveys were used to determine the depth of the freshwater/saltwater interface and groundwater preferential flow pathways along the Ruta de los Cenotes, near Puerto Morelos (northeast part of the Yucatán peninsula). The Yucatán Peninsula is a limestone platform that allows quick recharge of the aquifer, the main supply of water for this region. The water in the aquifer is divided into freshwater and saltwater zones. A Schlumberger resistivity sounding along the road near one cenote suggests the water table is 5 meters deep and the freshwater/saltwater interface is 38 meters deep. A time-domain electromagnetic (TEM) sounding suggests the freshwater/saltwater interface is 45 meters deep. The depth of the interface determines the volume of fresh water available. Preferential flow pathways in the vadose and saturated zones are karst conduits where groundwater percolates downward in the vadose zone. These were identified using resistivity profiling and spontaneous self-potential (SP) geophysical methods. Interpretation of SP profile Line SP1, located 3 m south of the cenote, suggests two fractures, which appear to extend south as far as SP profile Line SP2, 15 m south of the cenote; both lines are parallel to each other. SP anomalies suggest water flow along these fractures. The use of noninvasive geophysical methods, specifically SP, resistivity and TEM are useful for exploring the karst system in the Yucatán peninsula.

Transparent, superhydrophobic, and wear-resistant surfaces using deep reactive ion etching on PDMS substrates.

PubMed

Ebert, Daniel; Bhushan, Bharat

2016-11-01

Surfaces that simultaneously exhibit superhydrophobicity, low contact angle hysteresis, and high transmission of visible light are of interest for many applications, such as optical devices, solar panels, and self-cleaning windows. Superhydrophobicity could also find use in medical devices where antifouling characteristics are desirable. These applications also typically require mechanical wear resistance. The fabrication of such surfaces is challenging due to the competing goals of superhydrophobicity and transmittance in terms of the required degree of surface roughness. In this study, deep reactive ion etching (DRIE) was used to create rough surfaces on PDMS substrates using a O2/CF4 plasma. Surfaces then underwent an additional treatment with either octafluorocyclobutane (C4F8) plasma or vapor deposition of perfluorooctyltrichlorosilane (PFOTCS) following surface activation with O2 plasma. The effects of surface roughness and the additional surface modifications were examined with respect to the contact angle, contact angle hysteresis, and optical transmittance. To examine wear resistance, a sliding wear experiment was performed using an atomic force microscope (AFM). Copyright © 2016 Elsevier Inc. All rights reserved.

Modeling spray/puddle dissolution processes for deep-ultraviolet acid-hardened resists

NASA Astrophysics Data System (ADS)

Hutchinson, John M.; Das, Siddhartha; Qian, Qi-De; Gaw, Henry T.

1993-10-01

A study of the dissolution behavior of acid-hardened resists (AHR) was undertaken for spray and spray/puddle development processes. The Site Services DSM-100 end-point detection system is used to measure both spray and puddle dissolution data for a commercially available deep-ultraviolet AHR resist, Shipley SNR-248. The DSM allows in situ measurement of dissolution rate on the wafer chuck and hence allows parameter extraction for modeling spray and puddle processes. The dissolution data for spray and puddle processes was collected across a range of exposure dose and postexposure bake temperature. The development recipe was varied to decouple the contribution of the spray and puddle modes to the overall dissolution characteristics. The mechanisms involved in spray versus puddle dissolution and the impact of spray versus puddle dissolution on process performance metrics has been investigated. We used the effective-dose-modeling approach and the measurement capability of the DSM-100 and developed a lumped parameter model for acid-hardened resists that incorporates the effects of exposure, postexposure bake temperature and time, and development condition. The PARMEX photoresist-modeling program is used to determine parameters for the spray and for the puddle process. The lumped parameter AHR model developed showed good agreement with experimental data.

4D inversion of time-lapse magnetotelluric data sets for monitoring geothermal reservoir

NASA Astrophysics Data System (ADS)

Nam, Myung Jin; Song, Yoonho; Jang, Hannuree; Kim, Bitnarae

2017-06-01

The productivity of a geothermal reservoir, which is a function of the pore-space and fluid-flow path of the reservoir, varies since the properties of the reservoir changes with geothermal reservoir production. Because the variation in the reservoir properties causes changes in electrical resistivity, time-lapse (TL) three-dimensional (3D) magnetotelluric (MT) methods can be applied to monitor the productivity variation of a geothermal reservoir thanks to not only its sensitivity to the electrical resistivity but also its deep depth of survey penetration. For an accurate interpretation of TL MT-data sets, a four-dimensional (4D) MT inversion algorithm has been developed to simultaneously invert all vintage data considering time-coupling between vintages. However, the changes in electrical resistivity of deep geothermal reservoirs are usually small generating minimum variation in TL MT responses. Maximizing the sensitivity of inversion to the changes in resistivity is critical in the success of 4D MT inversion. Thus, we further developed a focused 4D MT inversion method by considering not only the location of a reservoir but also the distribution of newly-generated fractures during the production. For the evaluation of the 4D MT algorithm, we tested our 4D inversion algorithms using synthetic TL MT-data sets.

Audio-frequency magnetotelluric imaging of the Hijima fault, Yamasaki fault system, southwest Japan

NASA Astrophysics Data System (ADS)

Yamaguchi, S.; Ogawa, Y.; Fuji-Ta, K.; Ujihara, N.; Inokuchi, H.; Oshiman, N.

2010-04-01

An audio-frequency magnetotelluric (AMT) survey was undertaken at ten sites along a transect across the Hijima fault, a major segment of the Yamasaki fault system, Japan. The data were subjected to dimensionality analysis, following which two-dimensional inversions for the TE and TM modes were carried out. This model is characterized by (1) a clear resistivity boundary that coincides with the downward projection of the surface trace of the Hijima fault, (2) a resistive zone (>500 Ω m) that corresponds to Mesozoic sediment, and (3) shallow and deep two highly conductive zones (30-40 Ω m) along the fault. The shallow conductive zone is a common feature of the Yamasaki fault system, whereas the deep conductor is a newly discovered feature at depths of 800-1,800 m to the southwest of the fault. The conductor is truncated by the Hijima fault to the northeast, and its upper boundary is the resistive zone. Both conductors are interpreted to represent a combination of clay minerals and a fluid network within a fault-related fracture zone. In terms of the development of the fluid networks, the fault core of the Hijima fault and the highly resistive zone may play important roles as barriers to fluid flow on the northeast and upper sides of the conductive zones, respectively.

Cytotoxic and antibacterial angucycline- and prodigiosin-analogues from the deep-sea derived Streptomyces sp. SCSIO 11594.

PubMed

Song, Yongxiang; Liu, Guangfu; Li, Jie; Huang, Hongbo; Zhang, Xing; Zhang, Hua; Ju, Jianhua

2015-03-16

Two new C-glycoside angucyclines, marangucycline A (1) and marangucycline B (2), along with three known compounds, dehydroxyaquayamycin (3), undecylprodigiosin (4) and metacycloprodigiosin (5), have been identified as products of the deep-sea sediment strain Streptomyces sp. SCSIO 11594. New structures were elucidated on the basis of HRESIMS, 1D and 2D NMR analyses and comparisons to previously reported datasets. Compounds 2 and 4 displayed in vitro cytotoxicity against four cancer cell lines A594, CNE2, HepG2, MCF-7 superior to those obtained with cisplatin, the positive control. Notably, compound 2 bearing a keto-sugar displayed significant cytotoxicity against cancer cell lines with IC50 values ranging from 0.24 to 0.56 μM; An IC50 value of 3.67 μM was found when using non-cancerous hepatic cell line HL7702, demonstrating the cancer cell selectivity of 2. Compounds 1-3 were proved to have weak antibacterial activities against Enterococcus faecalis ATCC29212 with an MIC value of 64.0 μg/mL. Moreover, 3 displayed selective antibacterial activity against methicillin-resistant Staphylococcus epidermidis shhs-E1 with an MIC value of 16.0 μg/mL.

Deep transcranial magnetic stimulation (dTMS) - beyond depression.

PubMed

Tendler, Aron; Barnea Ygael, Noam; Roth, Yiftach; Zangen, Abraham

2016-10-01

Deep transcranial magnetic stimulation (dTMS) utilizes different H-coils to study and treat a variety of psychiatric and neurological conditions with identifiable brain targets. The availability of this technology is dramatically changing the practice of psychiatry and neurology as it provides a safe and effective way to treat even drug-resistant patients. However, up until now, no effort was made to summarize the different types of H-coils that are available, and the conditions for which they were tested. Areas covered: Here we assembled all peer reviewed publication that used one of the H-coils, together with illustrations of the effective field they generate within the brain. Currently, the technology has FDA clearance for depression and European clearance for additional disorders, and multi-center trials are exploring its safety and effectiveness for OCD, PTSD, bipolar depression and nicotine addiction. Expert commentary: Taken together with positive results in smaller scale experiments, dTMS coils represent a non-invasive way to manipulate pathological activity in different brain structures and circuits. Advances in stimulation and imaging methods can now lead to efficacious and logical treatments. This should reduce the stigma associated with mental disorders, and improve access to psychiatric treatment.

Electrical Grounding - a Field for Geophysicists and Electrical Engineers Partnership

NASA Astrophysics Data System (ADS)

Freire, P. F.; Pane, E.; Guaraldo, N.

2012-12-01

Technology for designing ground electrodes for high-voltage direct current transmission systems (HVDC) has being using in the last years, deep soil models based on a wide range of geophysical methods. These models shall include detailed representation of shallow soil, down to 100 meters, in order to allow the evaluation of the soil conditions where the ground electrodes will be buried. Also deep soil models are needed, to be used for the interference studies, which shall represent a soil volume of about 15 km deep and a surface area of about 15 to 30 km radius. Large facilities for power plants (hydroelectric and wind farms, for example) and industrial complexes (such as petrochemical plants) has become usual at the current stage of Brazil industrialization. Grounding mats for these facilities are made of a buried cooper mesh, interconnected to a wide variety of metallic masses, such as steel reinforced concrete foundations, ducts in general etc. These grounding systems may present dimensions with the order of hundreds of meters, and, at least in Brazil, are usually calculated by using electrical resistivity soil models, based on short spacing Wenner measurements (with maximum spacing of about 64 m.). The soil model shall be the best possible representation of the environment in which the grounding electrodes are immersed, for the purpose of calculation of resistance or for digital simulation. The model to be obtained is limited by the amount and quality of soil resistivity measurements are available, and the resources to be used in the calculations and simulations. Geophysics uses a wide range of technologies for exploring subsoil, ranging from surface measurements to wells logging - seismic, gravimetric, magnetic, electrical, electromagnetic and radiometric. The electrical and electromagnetic methods includes various measurement techniques (Wenner, Schlumberger, TDEM, Magneto-telluric etc.), which together allow the development of complex resistivity soil models, layered stratified or showing lateral variations, ranging down to several tens of kilometers deep, reaching the crust-mantle interface (typically with the order of 30-40 km). This work aims to analyze the constraints of the current soil models being used for grounding electrodes design, and suggests the need of a soil modeling methodology compatible with large grounding systems. Concerning the aspects related to soil modeling, electrical engineers need to get aware of geophysics resources, such as: - geophysical techniques for soil electrical resistivity prospection (down to about 15 kilometers deep); and - techniques for converting field measured data, from many different geophysical techniques, into adequate soil models for grounding grid simulation. It is also important to equalize the basic knowledge for the professionals that are working together for the specific purpose of soil modeling for electrical grounding studies. The authors have experienced the situation of electrical engineers working with geophysicists, but it was not clear for the latter the effective need of the electrical engineers, and for the engineers it was unknown the available geophysical resources, and also, what to do convert the large amount of soil resistivity data into a reliable soil model.

Gravity Data from the Teboursouk Area ("Diapirs Zone", Northern Tunisia): Characterization of Deep Structures and Updated Tectonic Pattern

NASA Astrophysics Data System (ADS)

Hachani, Fatma; Balti, Hadhemi; Kadri, Ali; Gasmi, Mohamed

2016-04-01

Located between eastern segments of the Atlas and Tell-Rif oro-genic belts, the "Dome zone" of northern Tunisia is characterized by the juxtaposition of various structures that mainly controlled the long geody-namic history of this part of the south-Tethyan Margin. To better understand the organization and deep extension of these structures, gravity data from the Teboursouk key area are proposed. These data include the plotting of Bouguer anomaly map and related parameters such as vertical and horizontal gradients, upward continuation and Euler solution. Compared to geological and structural maps available, they allow the identification of new deep structures and greater precision regarding the characteristics and organization of known ones; consequently, an updated structural pattern is proposed.

Hypogene caves of the central Appalachian Shenandoah Valley in Virginia

USGS Publications Warehouse

Doctor, Daniel H.; Orndorff, Wil

2017-01-01

Several caves in the Shenandoah Valley in Virginia show evidence for early hypogenic conduit development with later-enhanced solution under partly confined phreatic conditions guided by geologic structures. Many (but not all) of these caves have been subsequently invaded by surface waters as a result of erosion and exhumation. Those not so affected are relict phreatic caves, bearing no relation to modern drainage patterns. Field and petrographic evidence shows that carbonate rocks hosting certain relict phreatic caves were dolomitized and/or silicified by early hydrothermal fluid migration in zones that served to locally enhance rock porosity, thus providing preferential pathways for later solution by groundwater flow, and making the surrounding bedrock more resistant to surficial weathering to result in caves that reside within isolated hills on the land surface. Features suggesting that deep phreatic processes dominated the development of these relict caves include (1) cave passage morphologies indicative of ascending fluids, (2) cave plans of irregular pattern, reflecting early maze or anastomosing development, (3) a general lack of cave breakdown and cave streams or cave stream deposits, and (4) calcite wall and pool coatings within isolated caves intersecting the local water table, and within unroofed caves at topographic locations elevated well above the local base level. Episodes of deep karstification were likely separated by long periods of geologic time, encompassing multiple phases of sedimentary fill and excavation within caves, and reflect a complex history of deep fluid migration that set the stage for later shallow speleogenesis that continues today.

The influence of thermal annealing on the characteristics of Au/Ni Schottky contacts on n-type 4 H-SiC

NASA Astrophysics Data System (ADS)

Omotoso, E.; Auret, F. D.; Igumbor, E.; Tunhuma, S. M.; Danga, H. T.; Ngoepe, P. N. M.; Taleatu, B. A.; Meyer, W. E.

2018-05-01

The effects of isochronal annealing on the electrical, morphological and structural characteristics of Au/Ni/4 H-SiC Schottky barrier diodes (SBDs) have been studied. Current-voltage ( I- V), capacitance-voltage ( C- V), deep-level transient spectroscopy, scanning electron microscope (SEM) and X-ray diffraction measurements were employed to study the thermal effect on the characteristics of the SBDs. Prior to thermal annealing of Schottky contacts, the I- V measurements results confirmed the good rectification behaviour with ideality factor of 1.06, Schottky barrier height of 1.20 eV and series resistance of 7 Ω. The rectification properties after annealing was maintained up to an annealing temperature of 500 °C, but deviated slightly above 500 °C. The uncompensated ionized donor concentration decreased with annealing temperature, which could be attributed to out-diffusion of the 4 H-SiC into the Au/Ni contacts and decrease in bonding due to formation of nickel silicides. We observed the presence of four deep-level defects with energies 0.09, 0.11, 0.16 and 0.65 eV below the conduction band before and after the isochronal annealing up to 600 °C. The conclusion drawn was that annealing did not affect the number of deep-level defects present in Au/Ni/4 H-SiC contacts. The variations in electrical properties of the devices were attributed to the phase transformations and interfacial reactions that occurred after isochronal annealing.

A sparse autoencoder-based deep neural network for protein solvent accessibility and contact number prediction.

PubMed

Deng, Lei; Fan, Chao; Zeng, Zhiwen

2017-12-28

Direct prediction of the three-dimensional (3D) structures of proteins from one-dimensional (1D) sequences is a challenging problem. Significant structural characteristics such as solvent accessibility and contact number are essential for deriving restrains in modeling protein folding and protein 3D structure. Thus, accurately predicting these features is a critical step for 3D protein structure building. In this study, we present DeepSacon, a computational method that can effectively predict protein solvent accessibility and contact number by using a deep neural network, which is built based on stacked autoencoder and a dropout method. The results demonstrate that our proposed DeepSacon achieves a significant improvement in the prediction quality compared with the state-of-the-art methods. We obtain 0.70 three-state accuracy for solvent accessibility, 0.33 15-state accuracy and 0.74 Pearson Correlation Coefficient (PCC) for the contact number on the 5729 monomeric soluble globular protein dataset. We also evaluate the performance on the CASP11 benchmark dataset, DeepSacon achieves 0.68 three-state accuracy and 0.69 PCC for solvent accessibility and contact number, respectively. We have shown that DeepSacon can reliably predict solvent accessibility and contact number with stacked sparse autoencoder and a dropout approach.

Temperature dependence of electrical properties of gallium-nitride bulk single crystals doped with Mg and their evolution with annealing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Litwin-Staszewska, E.; Suski, T.; Piotrzkowski, R.

Comprehensive studies of the electrical properties of Mg-doped bulk GaN crystals, grown by high-pressure synthesis, were performed as a function of temperature up to 750{degree}C. Annealing of the samples in nitrogen ambient modifies qualitatively their resistivity values {rho} and the {rho}(T) variation. It was found that our material is characterized by a high concentration of oxygen-related donors and that the charge transport in the studied samples is determined by two types of states, one of shallow character (Mg-related state, E{sub A}{approximately}0.15eV), and the second one much more deep, E{sub 2}{approximately}0.95eV (above the valence band). Depending on the effective concentration ofmore » either states, different resistivities {rho} can be observed: lower resistivity ({rho}{lt}10{sup 4}{Omega}cm at ambient temperature) in samples with dominant E{sub A} states and very high resistivity ({rho}{gt}10{sup 6}{Omega}cm at ambient temperature) in samples with dominant E{sub 2} states. For the first type of samples, annealing at T{sub ann}{lt}500{degree}C leads to a decrease of their resistivity and is associated with an increase of the effective concentration of the shallow Mg acceptors. Annealing of both types of samples at temperatures between 600 and 750{degree}C leads to an increase of the deep state concentration. The presence of hydrogen ambient during annealing of the low-resistivity samples strongly influences their properties. The increase of the sample resistivity and an appearance of a local vibrational mode of hydrogen at 3125 cm{minus}1 were observed. These effects can be removed by annealing in hydrogen-free ambient. {copyright} 2001 American Institute of Physics.« less

Geotomography of a Shallow Sand Aquifer in North-Eastern Ontario

NASA Astrophysics Data System (ADS)

Bank, C.; Meadows, F.

2011-12-01

We used ground-probing radar and resistivity surveys to identify subsurface structures and topography that may correlate with strong chemical gradients in a shallow glaciofluvial sand aquifer 10km NW of Deep River, Ontario. Iron oxide springs lead to the discovery of the small aquifer, and yearly analysis of ground water chemistry at 47 Piezometers have identified persistent, localized chemical gradients of ferrous, ferric, sulfate, and sulfide ions (Ferris, 2006) and microbial organisms have been identified as the redox protagonists (Shirokova, 2011). The radargrams collected along nine profiles (200 and 400 MHz antennae, ranging from 36 to 106 m) show a subsurface layer between 0.8m and 3.4m thick, distinguishable by its many hyperbola shaped reflections, and varying topography. Resistivity values from eight lines (Wenner alpha, beta, and gamma arrays with 24 or 48 electrodes at 1m spacing) vary in general from high values (2000-6000 Ohm.m) above 1-2 m to lower values (less than 1000 Ohm.m) below 2 to a 5m depth. A permanent line of 24 electrodes spaced 1m apart and crossing the highest concentration of iron ions was monitored over 8 weeks, and weather was closely observed to see how the resistivity of the ground water varied over time. The distinguishable layer found by the GPR can be mapped to an outcrop of glacial till, and it is believed that the hyperbolas reflected are cobble and boulders in the till. Furthermore, decreases in the elevation of this layer correspond to an increase in ionic concentrations of sulfide, sulfate, ferric, and ferrous iron. The layer above the suspected till is identified to be glaciofluvial sand from outcrops along the surveys, and a paleochannel structure is observed in one GPR survey. The resistivity surveys consistently show low resistivity values in areas of high ionic concentration, and high resistivity values t the top of the vadose zone including below dry sand outcrops and within tree root systems of trees that can be seen at the surface. However there are areas at the surface with values of approx. 500 Ohm.m in areas where ionic concentrations decrease and the water table is not observed at the surface. Weather, including hot spells and torrential downpours, seem to have very little effect on resistivity values over time.

Large enhancement of light extraction efficiency in AlGaN-based nanorod ultraviolet light-emitting diode structures.

PubMed

Ryu, Han-Youl

2014-02-04

Light extraction efficiency (LEE) of AlGaN-based nanorod deep ultraviolet (UV) light-emitting diodes (LEDs) is numerically investigated using three-dimensional finite-difference time-domain simulations. LEE of deep UV LEDs is limited by strong light absorption in the p-GaN contact layer and total internal reflection. The nanorod structure is found to be quite effective in increasing LEE of deep UV LEDs especially for the transverse magnetic (TM) mode. In the nanorod LED, strong dependence of LEE on structural parameters such as the diameter of a nanorod and the p-GaN thickness is observed, which can be attributed to the formation of resonant modes inside the nanorod structure. Simulation results show that, when the structural parameters of the nanorod LED are optimized, LEE can be higher than 50% and 60% for the transverse electric (TE) and TM modes, respectively. The nanorod structure is expected to be a good candidate for the application to future high-efficiency deep UV LEDs. PACS: 41.20.Jb; 42.72.Bj; 85.60.Jb.

Large enhancement of light extraction efficiency in AlGaN-based nanorod ultraviolet light-emitting diode structures

PubMed Central

2014-01-01

Light extraction efficiency (LEE) of AlGaN-based nanorod deep ultraviolet (UV) light-emitting diodes (LEDs) is numerically investigated using three-dimensional finite-difference time-domain simulations. LEE of deep UV LEDs is limited by strong light absorption in the p-GaN contact layer and total internal reflection. The nanorod structure is found to be quite effective in increasing LEE of deep UV LEDs especially for the transverse magnetic (TM) mode. In the nanorod LED, strong dependence of LEE on structural parameters such as the diameter of a nanorod and the p-GaN thickness is observed, which can be attributed to the formation of resonant modes inside the nanorod structure. Simulation results show that, when the structural parameters of the nanorod LED are optimized, LEE can be higher than 50% and 60% for the transverse electric (TE) and TM modes, respectively. The nanorod structure is expected to be a good candidate for the application to future high-efficiency deep UV LEDs. PACS 41.20.Jb; 42.72.Bj; 85.60.Jb PMID:24495598

Lathyrus sativus transcriptome resistance response to Ascochyta lathyri investigated by deepSuperSAGE analysis

PubMed Central

Almeida, Nuno F.; Krezdorn, Nicolas; Rotter, Björn; Winter, Peter; Rubiales, Diego; Vaz Patto, Maria C.

2015-01-01

Lathyrus sativus (grass pea) is a temperate grain legume crop with a great potential for expansion in dry areas or zones that are becoming more drought-prone. It is also recognized as a potential source of resistance to several important diseases in legumes, such as ascochyta blight. Nevertheless, the lack of detailed genomic and/or transcriptomic information hampers further exploitation of grass pea resistance-related genes in precision breeding. To elucidate the pathways differentially regulated during ascochyta-grass pea interaction and to identify resistance candidate genes, we compared the early response of the leaf gene expression profile of a resistant L. sativus genotype to Ascochyta lathyri infection with a non-inoculated control sample from the same genotype employing deepSuperSAGE. This analysis generated 14.387 UniTags of which 95.7% mapped to a reference grass pea/rust interaction transcriptome. From the total mapped UniTags, 738 were significantly differentially expressed between control and inoculated leaves. The results indicate that several gene classes acting in different phases of the plant/pathogen interaction are involved in the L. sativus response to A. lathyri infection. Most notably a clear up-regulation of defense-related genes involved in and/or regulated by the ethylene pathway was observed. There was also evidence of alterations in cell wall metabolism indicated by overexpression of cellulose synthase and lignin biosynthesis genes. This first genome-wide overview of the gene expression profile of the L. sativus response to ascochyta infection delivered a valuable set of candidate resistance genes for future use in precision breeding. PMID:25852725

Geophysical investigations in deep horizontal holes drilled ahead of tunnelling

USGS Publications Warehouse

Carroll, R.D.; Cunningham, M.J.

1980-01-01

Deep horizontal drill holes have been used since 1967 by the Defense Nuclear Agency as a primary exploration tool for siting nuclear events in tunnels at the Nevada Test Site. The U.S. Geological Survey had developed geophysical logging techniques for obtaining resistivity and velocity in these holes, and to date 33 horizontal drill holes in excess of 300 m in depth have been successfully logged. The deepest hole was drilled to a horizontal depth of 1125 m. The purposes of the logging measurements are to define clay zones, because of the unstable ground conditions such zones can present to tunnelling, and to define zones of partially saturated rock, because of the attenuating effects such zones have on the shock wave generated by the nuclear detonation. Excessive attenuation is undesirable because the shock wave is used as a tunnel closure mechanism to contain debris and other undesirable explosion products. Measurements are made by pumping resistivity, sonic and geophone probes down the drill string and out of the bit into the open hole. Clay zones are defined by the electrical resistivity technique based on empirical data relating the magnitude of the resistivity measurement to qualitative clay content. Rock exhibiting resistivity of less than 20 ??-m is considered potentially unstable, and resistivities less than 10 ??-m indicate appreciable amounts of clay are present in the rock. Partially saturated rock zones are defined by the measurement of the rock sound speed. Zones in the rock which exhibit velocities less than 2450 m/sec are considered of potential concern. ?? 1980.

Lithofacies control of lignite distribution and ground-water quality, Wilcox group (Eocene), east-central Texas

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ayers, W.B. Jr.; Lewis, A.H.

1984-04-01

Deep lignite resources (200-2000 ft; 61-610 m) were evaluated regionally using 1470 geophysical well logs to interpret lithofacies, lignite occurrence, and resistivity (water quality). The regional distribution of lithofacies indicates that in the region, the Wilcox Group is a fluvial-deltaic system. The primary fluvial system entered the Wilcox coastal plain west of Waco, Texas, trended southeast, and supplied a 75-mi (120-km) wide fluvial-deltaic system comparable in size to the Mississippi system. Lignites are most abundant in the Calvert Bluff Formation (upper Wilcox). Lower Calvert Bluff lignites are thickest and most extensive southwest of the Navasota River, whereas those of themore » upper Calvert Bluff are thickest northeast of the Brazos River. In the shallow subsurface, Calvert Bluff lignites are found in dip-elongate low-sand areas (flood plains) between channel-sand belts. Basinward, laterally continuous lignites coincide with high net sand areas comprise of distributary channel sands indicative of a delta-plain setting. The wilcox Group is a major aquifer. Maps of resistivity values show that Wilcox channel sands are conduits for ground-water flow. High values of formation resistivity (low total dissolved solids) exist in recharge areas at outcrop and around salt domes. Elongate trends of high resistivity values extend tens of miles basinward and coincide with axes of major sands. Resistivity values decrease basinward and the 20 ohm-m contour delineates the downdip limit of fresh water. Lithofacies and lignite occurrence maps are guides to exploration for deep lignite. Resistivity maps can be used to explore for ground-water resources.« less

Deep brain stimulation as a functional scalpel.

PubMed

Broggi, G; Franzini, A; Tringali, G; Ferroli, P; Marras, C; Romito, L; Maccagnano, E

2006-01-01

Since 1995, at the Istituto Nazionale Neurologico "Carlo Besta" in Milan (INNCB,) 401 deep brain electrodes were implanted to treat several drug-resistant neurological syndromes (Fig. 1). More than 200 patients are still available for follow-up and therapeutical considerations. In this paper our experience is reviewed and pioneered fields are highlighted. The reported series of patients extends the use of deep brain stimulation beyond the field of Parkinson's disease to new fields such as cluster headache, disruptive behaviour, SUNCt, epilepsy and tardive dystonia. The low complication rate, the reversibility of the procedure and the available image guided surgery tools will further increase the therapeutic applications of DBS. New therapeutical applications are expected for this functional scalpel.

The Role of the Lateral Soft Tissues in Controlling Anterior Translation And Internal Rotation of the Tibia, And An Investigation of Lateral Reconstructions Accompanying ACL Reconstruction

PubMed Central

Williams, Andy; Stephen, Jo; Kittl, Christoph; Inderhaug, Eivint; El-Daou, Hadi; Dodds, Alex; Halewood, Camilla; Amis, Andrew

2017-01-01

Introduction: There is considerable current interest in the role of the lateral soft tissue structures in the context of ACL deficiency (ACLD). Of course the topic is not new but a re-visitation, although with improved experimental techniques available. It was clear that there was a rush to create surgical techniques based on the ‘Anterolateral Ligament’ (ALL) but without investigative ‘due-diligence’ and without consideration that other structures may be important, or more important. Objectives: To study the anatomy and biomechanics of the lateral soft tissues relevant to the ACL and ACL reconstruction techniques investigating isometricity, structures’ contributions to resistance of anterior tibial translation (ATT), internal rotation (IR), and pivot shift (PS). Also we studied the impact of various reconstructions on restoration of kinematics and potential over-constraint and effects on articular surface compression load. Methods: Several studies were undertaken. In all healthy fresh-frozen cadaveric specimens were used. Descriptive anatomy was described. Length changes of suture fixed at structure and reconstruction attachment points on the tibia and femur were measured with linear variable displacement transducers (LVDTs). To investigate structures’ contribution to resist translation and torque a 6-degrees of freedom robot with a universal force-moment sensor was used in a classic ‘cutting study’. The robot replayed the same movement with sequential sectioning of structures recording the decrease in force / torque needed to reach the same movement limit. In this way the structure’s resistance to motion as a percentage of the total could be calculated. In other studies knees were mounted in a test rig where knee kinematics were recorded from 0° to 100° of flexion by use of an optical tracking system. Joint surface compression was measured with Tekscan pressure-sensitive film. Results: The Anterolateral Ligament exists attaching to the tibia mid-way between the LCL attachment to the fibula and Gerdy’s tubercle, and the femur proximal and posterior to the femoral LCL attachment1. However the most isometric structure is the ITB2 from Gerdy’s tubercle to its attachments to the distal lateral femur. The ACL is the primary restraint to resist ATT, but is only the primary restraint to IR / PS close to extension. The ITB, with its attachments to the lateral distal femur, is the most important restraint at all other angles, whilst the ALL / capsule contribute very little restraint to ATT / IR / PS at any angle3. ITB-based tenodeses taken deep to the LCL, irrespective of femoral attachment points, are more isometric1 and restore kinematics more closely to normal compared to an ALL reconstruction. Fixation of the tenodeses with the knee with 0° tibial rotation, and tension of 20 N resulted in no change in tibio-femoral / patello-femoral contact pressures. Fixation with significant external rotation or excess tension (40 N) did increase contact pressures and lead to over-constraint. Conclusion: Despite recent interest the ALL is not as important to the ITB with its femoral attachments in controlling IR / PS. ITB-based tenodeses taken deep to the LCL perform well unless over-tensioned or fixed with tibial ER in the lab. 1 The Anterolateral Ligament: Anatomy, length changes and association with the Segond fracture A. L. Dodds, C. Halewood, C. M. Gupte, A. Williams, and A. A. Amis. Bone Joint J 2014 96-B: 325-331 2 Length change patterns of the lateral extra-articular structures of the knee and related reconstructions.C.Kittl, C Halewood, J Stephen, Gupte C, A Weiler, A. Williams, A.A. Amis. AJSM 2015; 43(2): 354-62 3 The role of the anterolateral structures and the ACL in controlling laxity of the intact and ACL-deficient knee. C Kittl, H El-Daou, KK Athwal, CM Gupte, A Weiler, A Williams, AA Amis. AJSM 2016; 44: 345-354

The Role of the Lateral Soft Tissues in Controlling Anterior Translation And Internal Rotation of the Tibia, and An Investigation of Lateral Reconstructions Accompanying ACL Reconstruction

PubMed Central

Williams, Andy; Stephen, Jo; Kittl, Christoph; Inderhaug, Eivint; El-Daou, Hadi; Dodds, Alex; Halewood, Camilla; Amis, Andrew

2017-01-01

Introduction: There is considerable current interest in the role of the lateral soft tissue structures in the context of ACL deficiency (ACLD). Of course the topic is not new but a re-visitation, although with improved experimental techniques available. It was clear that there was a rush to create surgical techniques based on the ‘Anterolateral Ligament’ (ALL) but without investigative ‘due-diligence’ and without consideration that other structures may be important, or more important. Objectives: To study the anatomy and biomechanics of the lateral soft tissues relevant to the ACL and ACL reconstruction techniques investigating isometricity, structures’ contributions to resistance of anterior tibial translation (ATT), internal rotation (IR), and pivot shift (PS). Also we studied the impact of various reconstructions on restoration of kinematics and potential over-constraint and effects on articular surface compression load. Methods: Several studies were undertaken. In all healthy fresh-frozen cadaveric specimens were used. Descriptive anatomy was described. Length changes of suture fixed at structure and reconstruction attachment points on the tibia and femur were measured with linear variable displacement transducers (LVDTs). To investigate structures’ contribution to resist translation and torque a 6-degrees of freedom robot with a universal force-moment sensor was used in a classic ‘cutting study’. The robot replayed the same movement with sequential sectioning of structures recording the decrease in force / torque needed to reach the same movement limit. In this way the structure’s resistance to motion as a percentage of the total could be calculated. In other studies knees were mounted in a test rig where knee kinematics were recorded from 0° to 100° of flexion by use of an optical tracking system. Joint surface compression was measured with Tekscan pressure-sensitive film. Results: The Anterolateral Ligament exists attaching to the tibia mid-way between the LCL attachment to the fibula and Gerdy’s tubercle, and the femur proximal and posterior to the femoral LCL attachment1. However the most isometric structure is the ITB2 from Gerdy’s tubercle to its attachments to the distal lateral femur. The ACL is the primary restraint to resist ATT, but is only the primary restraint to IR / PS close to extension. The ITB, with its attachments to the lateral distal femur, is the most important restraint at all other angles, whilst the ALL / capsule contribute very little restraint to ATT / IR / PS at any angle3. ITB-based tenodeses taken deep to the LCL, irrespective of femoral attachment points, are more isometric1 and restore kinematics more closely to normal compared to an ALL reconstruction. Fixation of the tenodeses with the knee with 0° tibial rotation, and tension of 20 N resulted in no change in tibio-femoral / patello-femoral contact pressures. Fixation with significant external rotation or excess tension (40 N) did increase contact pressures and lead to over-constraint. Conclusion: Despite recent interest the ALL is not as important to the ITB with its femoral attachments in controlling IR / PS. ITB-based tenodeses taken deep to the LCL perform well unless over-tensioned or fixed with tibial ER in the lab. The Anterolateral Ligament: Anatomy, length changes and association with the Segond fracture A. L. Dodds, C. Halewood, C. M. Gupte, A. Williams, and A. A. Amis. Bone Joint J 2014 96-B: 325-331 Length change patterns of the lateral extra-articular structures of the knee and related reconstructions. C.Kittl, C Halewood, J Stephen, Gupte C, A Weiler, A. Williams, A.A. Amis. AJSM 2015; 43(2): 354-62 The role of the anterolateral structures and the ACL in controlling laxity of the intact and ACL-deficient knee. C Kittl, H El-Daou, KK Athwal, CM Gupte, A Weiler, A Williams, AA Amis. AJSM 2016; 44: 345-354

Deep Learning for Brain MRI Segmentation: State of the Art and Future Directions.

PubMed

Akkus, Zeynettin; Galimzianova, Alfiia; Hoogi, Assaf; Rubin, Daniel L; Erickson, Bradley J

2017-08-01

Quantitative analysis of brain MRI is routine for many neurological diseases and conditions and relies on accurate segmentation of structures of interest. Deep learning-based segmentation approaches for brain MRI are gaining interest due to their self-learning and generalization ability over large amounts of data. As the deep learning architectures are becoming more mature, they gradually outperform previous state-of-the-art classical machine learning algorithms. This review aims to provide an overview of current deep learning-based segmentation approaches for quantitative brain MRI. First we review the current deep learning architectures used for segmentation of anatomical brain structures and brain lesions. Next, the performance, speed, and properties of deep learning approaches are summarized and discussed. Finally, we provide a critical assessment of the current state and identify likely future developments and trends.

Semiconductor technology program. Progress briefs

NASA Technical Reports Server (NTRS)

Bullis, W. M.

1980-01-01

Measurement technology for semiconductor materials, process control, and devices is reviewed. Activities include: optical linewidth and thermal resistance measurements; device modeling; dopant density profiles; resonance ionization spectroscopy; and deep level measurements. Standardized oxide charge terminology is also described.

Resistivity structure of the Furnas hydrothermal system (Azores archipelago, Portugal) from AMT and ERT imaging.

NASA Astrophysics Data System (ADS)

Byrdina, Svetlana; Vandemeulebrouck, Jean; Rath, Volker; Silva, Catarina; Hogg, Colin; Kiyan, Duygu; Viveiros, Fatima; Eleuterio, Joana; Gresse, Marceau

2016-04-01

The Furnas volcanic complex is located in the eastern part of the São Miguel Island and comprises a 5 km × 8 km summit depression filled by two nested calderas with several craters and a lake. Present-day volcanic activity of Furnas volcano is mostly located in the northern part of the caldera, within the Furnas village and north to Furnas Lake, where hydrothermal manifestations are mainly fumarolic fields, steam vents, thermal springs, and intense soil diffuse degassing. Considering the Furnas volcano as a whole, the total integrated CO2 efflux is extremely high, with a total amount of CO2 close to 1000 ton per day (Viveiros et al., 2009). We present the first results of an electrical resistivity tomography (ERT), combined with audio-magneto-telluric (AMT) measurements aligned along two profiles inside the caldera. The purpose of this survey is to delimit the extent, the geometry, and the depth of the hydrothermal system and to correlate the deep resistivity structure with high resolution cartography of diffuse CO2 flux (Viveiros et al, 2015). The ERT and AMT methods are complementary in terms of resolution and penetration depth: ERT can image the structural details of shallow hydrothermal system (down to 100 m in our study) while AMT can image at lower resolution deeper structures at the roots of a volcano (down to 4 km in our study). Our first independent 2D inversions of the ERT-AMT data show a good agreement between the surficial and deeper features. Below the main fumarole area we observe a low resistivity body (less than 1 Ohmm) which corresponds well to the high CO2 flux at the surface and is associated with an extended conductive body at larger depth. These results strongly suggest the presence of hydrothermal waters at depth or/and the presence of altered clay-rich material. On a larger scale however, the geometry of the conducting zones differs slightly from what was expected from earlier surface studies, and may not be directly related to fault zones mapped at the surface. These slight, but measurable discrepancies might have different origins but they stress the necessity of 3D modelling and the importance of the joint inversion of the data which we consider as a next step in our work.

Formation of metal and dielectric liners using a solution process for deep trench capacitors.

PubMed

Ham, Yong-Hyun; Kim, Dong-Pyo; Baek, Kyu-Ha; Park, Kun-Sik; Kim, Moonkeun; Kwon, Kwang-Ho; Shin, Hong-Sik; Lee, Kijun; Do, Lee-Mi

2012-07-01

We demonstrated the feasibility of metal and dielectric liners using a solution process for deep trench capacitor application. The deep Si trench via with size of 10.3 microm and depth of 71 microm were fabricated by Bosch process in deep reactive ion etch (DRIE) system. The aspect ratio was about 7. Then, nano-Ag ink and poly(4-vinylphenol) (PVPh) were used to form metal and dielectric liners, respectively. The thicknesses of the Ag and PVPh liners were about 144 and 830 nm, respectively. When the curing temperature of Ag film increased from 120 to 150 degrees C, the sheet resistance decreased rapidly from 2.47 to 0.72 Omega/sq and then slightly decreased to 0.6 Omega/sq with further increasing the curing temperature beyond 150 degrees C. The proposed liner formation method using solution process is a simple and cost effective process for the high capacity of deep trench capacitor.

Accelerated degradation of polyetheretherketone and its composites in the deep sea

NASA Astrophysics Data System (ADS)

Liu, Hao; Wang, Jianzhang; Jiang, Pengfei; Yan, Fengyuan

2018-04-01

The performance of polymer composites in seawater, under high hydrostatic pressure (typically few tens of MPa), for simulating exposures at great depths in seas and oceans, has been little studied. In this paper, polyetheretherketone (PEEK) and its composites reinforced by carbon fibres and glass fibres were prepared. The seawater environment with different seawater hydrostatic pressure ranging from normal pressure to 40 MPa was simulated with special equipment, in which the seawater absorption and wear behaviour of PEEK and PEEK-based composites were examined in situ. The effects of seawater hydrostatic pressure on the mechanical properties, wear resistance and microstructure of PEEK and its composites were focused on. The results showed that seawater absorption of PEEK and its composites were greatly accelerated by increased hydrostatic pressure in the deep sea. Affected by seawater absorption, both for neat PEEK and composites, the degradation on mechanical properties, wear resistance and crystallinity were induced, the degree of which was increasingly serious with the increase of hydrostatic pressure of seawater environment. There existed a good correlation in an identical form of exponential function between the wear rate and the seawater hydrostatic pressure. Moreover, the corresponding mechanisms of the effects of deep-sea hydrostatic pressure were also discussed.

Seismotectonics of the Taiwan Shoal region in the northeastern South China Sea: Insights from the crustal structure

NASA Astrophysics Data System (ADS)

Wan, Kuiyuan; Sun, Jinlong; Xu, Huilong; Xie, Xiaoling; Xia, Shaohong; Zhang, Xiang; Cao, Jinghe; Zhao, Fang; Fan, Chaoyan

2018-02-01

A cluster of earthquakes occurred in the Taiwan Shoal region on the outer rise of the Manila Trench. Although most were of small to medium magnitudes, one strong earthquake occurred on September 16, 1994. Several previous studies have provided important information to progress our understanding of this single earthquake. However, little is currently known about the earthquake cluster, and it is necessary to investigate the deep crustal structure of the Taiwan Shoal region to understand the mechanisms involved in controlling and generating it. This study presents a two-dimensional seismic tomographic image of the crustal structure along the OBS2012 profile based on ocean-bottom seismograph (OBS) data, which exhibits a high-velocity anomaly flanked by low-velocity anomalies in the upper crust beneath the Taiwan Shoal. In this study, 765 earthquakes (Richter magnitude ML > 1.5) occurring between 1991 and 2015 were studied and analyses of earthquake epicenters, regional faults, and the crustal structure provides an improved understanding of the nature of active tectonics in this region. Results of analyses indicate firstly that the high-velocity area represents major asperities that correspond to the location of the earthquake cluster and where stress is concentrated. It is also depicted that the earthquake cluster was influenced by fault interactions. However, the September 1994 earthquake occurred independently of these seismic activities and was associated with reactivation of a preexisting fault. It is also determined that slab pull is resisted by the exposed precollision accretionary prism, and the resistive force is causing accumulation of inplane compressive-stress. This may trigger a future damaging earthquake in the Taiwan Shoal region.

First measurement of the deep-inelastic structure of proton diffraction

NASA Astrophysics Data System (ADS)

Ahmed, T.; Aid, S.; Andreev, V.; Andrieu, B.; Appuhn, R.-D.; Arpagaus, M.; Babaev, A.; Baehr, J.; Bán, J.; Ban, Y.; Baranov, P.; Barrelet, E.; Bartel, W.; Barth, M.; Bassler, U.; Beck, H. P.; Behrend, H.-J.; Belousov, A.; Berger, Ch.; Bernardi, G.; Bernet, R.; Bertrand-Coremans, G.; Besançon, M.; Beyer, R.; Biddulph, P.; Bispham, P.; Bizot, J. C.; Blobel, V.; Borras, K.; Botterweck, F.; Boudry, V.; Braemer, A.; Brasse, F.; Braunschweig, W.; Brisson, V.; Bruncko, D.; Brune, C.; Buchholz, R.; Büngener, L.; Bürger, J.; Büsser, F. W.; Buniatian, A.; Burke, S.; Burton, M.; Buschhorn, G.; Campbell, A. J.; Carli, T.; Charles, F.; Clarke, D.; Clegg, A. B.; Clerbaux, B.; Colombo, M.; Contreras, J. G.; Cormack, C.; Coughlan, J. A.; Courau, A.; Coutures, Ch.; Cozzika, G.; Criegee, L.; Cussans, D. G.; Cvach, J.; Dagoret, S.; Dainton, J. B.; Dau, W. D.; Daum, K.; David, M.; Deffur, E.; Delcourt, B.; Del Buono, L.; De Roeck, A.; De Wolf, E. A.; Di Nezza, P.; Dollfus, C.; Dowell, J. D.; Dreis, H. B.; Droutskoi, A.; Duboc, J.; Düllmann, D.; Dünger, O.; Duhm, H.; Ebert, J.; Ebert, T. R.; Eckerlin, G.; Efremenko, V.; Egli, S.; Ehrlichmann, H.; Eichenberger, S.; Eichler, R.; Eckerlin, G.; Efremenko, V.; Egli, S.; Ehrlichmann, H.; Eichenberger, S.; Eichler, R.; Eisele, F.; Eisenhandler, E.; Ellison, R. J.; Elsen, E.; Erdmann, M.; Erdmann, W.; Evrard, E.; Favart, L.; Fedotov, A.; Feeken, D.; Felst, R.; Feltesse, J.; Ferencei, J.; Ferrarotto, F.; Flamm, K.; Fleischer, M.; Flieser, M.; Flügge, G.; Fomenko, A.; Forbush, M.; Formánek, J.; Foster, J. M.; Franke, G.; Fretwurst, E.; Gabathuler, E.; Gabathuler, K.; Gamerdinger, K.; Garvey, J.; Gayler, J.; Gebauer, M.; Gellrich, A.; Genzel, H.; Gerhards, R.; Goerlach, U.; Goerlich, L.; Gogitidze, N.; Goldberg, M.; Goldner, D.; Gonzalez-Pineiro, B.; Gorelov, I.; Goritchev, P.; Grab, C.; Grässler, H.; Grässler, R.; Greenshaw, T.; Grindhammer, G.; Gruber, A.; Gruber, C.; Haack, J.; Haidt, D.; Hajduk, L.; Hamon, O.; Hampel, M.; Hanlon, E. M.; Hapke, M.; Haynes, W. J.; Heatherington, J.; Heinzelmann, G.; Henderson, R. C. W.; Henschel, H.; Herynek, I.; Hess, M. F.; Hildesheim, W.; Hill, P.; Hiller, K. H.; Hilton, C. D.; Hladký, J.; Hoeger, K. C.; Höppner, M.; Horisberger, R.; Hudgson, V. L.; Huet, Ph.; Hütte, M.; Hufnagel, H.; Ibbotson, M.; Itterbeck, H.; Jabiol, M.-A.; Jacholkowska, A.; Jacobsson, C.; Jaffre, M.; Janoth, J.; Jansen, T.; Jönsson, L.; Johnson, D. P.; Johnson, L.; Jung, H.; Kalmus, P. I. P.; Kant, D.; Kaschowitz, R.; Kasselmann, P.; Kathage, U.; Katzy, J.; Kaufmann, H. H.; Kazarian, S.; Kenyon, I. R.; Kermiche, S.; Keuker, C.; Kiesling, C.; Klein, M.; Kleinwort, C.; Knies, G.; Ko, W.; Köhler, T.; Köhne, J. H.; Kolanoski, H.; Kole, F.; Kolva, S. D.; Korbel, V.; Korn, M.; Kostka, P.; Kotelnikov, S. K.; Krämerkämper, T.; Krasny, M. W.; Krehbiel, H.; Krücker, D.; Krüger, U.; Krüner-Marquis, U.; Kubenka, J. P.; Küster, H.; Kuhlen, M.; Kurča, T.; Kurzhöfer, J.; Kuznik, B.; Lacour, D.; Lamarche, F.; Lander, R.; Landon, M. P. J.; Lange, W.; Lanius, P.; Laporte, J.-F.; Lebedev, A.; Leverenz, C.; Levonian, S.; Ley, Ch.; Lindner, A.; Lindström, G.; Link, J.; Linsel, F.; Lipinski, J.; List, B.; Lobo, G.; Loch, P.; Lohmander, H.; Lomas, J.; Lopez, G. C.; Lubimov, V.; Lüke, D.; Magnussen, N.; Malinovski, E.; Mani, S.; Maraček, R.; Marage, P.; Marks, J.; Marshall, R.; Martens, J.; Martin, R.; Martyn, H.-U.; Martyniak, J.; Masson, S.; Mavroidis, T.; Maxfield, S. J.; McMahon, S. J.; Mehta, A.; Meier, K.; Mercer, D.; Merz, T.; Meyer, C. A.; Meyer, H.; Meyer, J.; Mikocki, S.; Milstead, D.; Moreau, F.; Morris, J. V.; Mroczko, E.; Müller, G.; Müller, K.; Murín, P.; Nagovizin, V.; Nahnhauer, R.; Naroska, B.; Naumann, Th.; Newman, P. R.; Newton, D.; Neyret, D.; Nguyen, H. K.; Nicholls, T. C.; Niebergall, F.; Niebuhr, C.; Niedzballa, Ch.; Nisius, R.; Nowak, G.; Noyes, G. W.; Nyberg-Werther, M.; Oakden, M.; Oberlack, H.; Obrock, U.; Olsson, J. E.; Ozerov, D.; Panaro, E.; Panitch, A.; Pascaud, C.; Patel, G. D.; Peppel, E.; Perez, E.; Phillips, J. P.; Pichler, Ch.; Pitzl, D.; Pope, G.; Prell, S.; Prosi, R.; Rabbertz, K.; Rädel, G.; Raupach, F.; Reimer, P.; Reinshagen, S.; Ribarics, P.; Rick, H.; Riech, V.; Riedlberger, J.; Riess, S.; Rietz, M.; Rizvi, E.; Robertson, S. M.; Robmann, P.; Roloff, H. E.; Roosen, R.; Rosenbauer, K.; Rostovtsev, A.; Rouse, F.; Royon, C.; Rüter, K.; Rusakov, S.; Rybicki, K.; Rylko, R.; Sahlmann, N.; Sanchez, E.; Sankey, D. P. C.; Schacht, P.; Schiek, S.; Schleper, P.; von Schlippe, W.; Schmidt, C.; Schmidt, D.; Schmidt, G.; Schöning, A.; Schröder, V.; Schuhmann, E.; Schwab, B.; Schwind, A.; Sefkow, F.; Seidel, M.; Sell, R.; Semenov, A.; Shekelyan, V.; Sheviakov, I.; Shooshtari, H.; Shtarkov, L. N.; Siegmon, G.; Siewert, U.; Sirois, Y.; Skillicorn, I. O.; Smirnov, P.; Smith, J. R.; Solochenko, V.; Soloviev, Y.; Spiekermann, J.; Spitzer, H.; Starosta, R.; Steenbock, M.; Steffen, P.; Steinberg, R.; Stella, B.; Stephens, K.; Stier, J.; Stiewe, J.; Stösslein, U.; Stolze, K.; Strachota, J.; Straumann, U.; Struczinski, W.; Sutton, J. P.; Tapprogge, S.; Taylor, R. E.; Tchernyshov, V.; Thiebaux, C.; Thompson, G.; Truöl, P.; Turnau, J.; Tutas, J.; Uelkes, P.; Usik, A.; Valkár, S.; Valkárová, A.; Vallée, C.; Van Esch, P.; Van Mechelen, P.; Vartapetian, A.; Vazdik, Y.; Verrecchia, P.; Villet, G.; Wacker, K.; Wagener, A.; Wagener, M.; Walker, I. W.; Walther, A.; Weber, G.; Weber, M.; Wegener, D.; Wegner, A.; Wellisch, H. P.; West, L. R.; Willard, S.; Winde, M.; Winter, G.-G.; Wittek, C.; Wright, A. E.; Wünsch, E.; Wulff, N.; Yiou, T. P.; Žáček, J.; Zarbock, D.; Zhang, Z.; Zhokin, A.; Zimmer, M.; Zimmermann, W.; Zomer, F.; Zuber, K.; H1 Collaboration

1995-02-01

A measurement is presented, using data taken with the H1 detector at HERA, of the contribution of diffractive interactions to deep-inelastic electron-proton ( ep) scattering in the kinematic range 8.5 < Q2 < 50GeV 2, 2.4 × 10 -4 < Bjorken- x < 0.0133, and 3.7 × 10 -4 < χp < 0.043. The diffractive contribution to the proton structure function F2( x, Q2) is evaluated as a function of the appropriate deep-inelastic scattering variables χp, Q2, β (= {χ}/{χ p}) using a class of deep-inelastic ep scattering events with no hadronic energy flow in an interval of pseudo-rapidity adjacent to the proton beam direction. the dependence of this contribution on χp is measured to be χp- n with n = 1.19 ± 0.06 (stat.) ± 0.07 (syst.) independent of β and Q2, which is consistent with both a diffractive interpretation and a factorisable ep diffractive cross section. A first measurement of the deep-inelastic structure of the pomeron in the form of the Q2 and β dependences of a factorised structure function is presented. For all measured β, this structure function is observed to be consistent with scale invariance.

Effects of soil mechanical resistance on nematode community structure under conventional sugarcane and remaining of Atlantic Forest.

PubMed

de Oliveira Cardoso, Mércia; Pedrosa, Elvira M R; Rolim, Mário M; Silva, Enio F F E; de Barros, Patrícia A

2012-06-01

Nematodes present high potential as a biological indicator of soil quality. In this work, it was evaluated relations between soil physical properties and nematode community under sugarcane cropping and remaining of Atlantic Forest areas in Northeastern Pernambuco, Brazil. Soil samples were collected from September to November 2009 along two 200-m transects in both remaining of Atlantic Forest and sugarcane field at deeps of 0-10, 10-20, 20-30, 30-40, and 40-50 cm. For soil characterization, it was carried out analysis of soil size, water content, total porosity, bulk density, and particle density. The level of soil mechanical resistance was evaluated through a digital penetrometer. Nematodes were extracted per 300 cm(3) of soil through centrifugal flotation in sucrose being quantified, classified according trophic habit, and identified in level of genus or family. Data were analyzed using Pearson correlation at 5% of probability. Geostatistical analysis showed that the penetration resistance, water content, total porosity, and bulk density on both forest and cultivated area exhibited spatial dependence at the sampled scale, and their experimental semivariograms were fitted to spherical and exponential models. In forest area, the ectoparasites and free-living nematodes exhibited spherical model. In sugarcane field, the soil nematodes exhibited pure nugget effect. Pratylenchus sp. and Helicotylenchus sp. were prevalent in sugarcane field, but in forest, there was prevalence of Dorylaimidae and Rhabditidae. Total amount of nematode did not differ between environments; however, community trophic structure in forest presented prevalence of free-living nematodes: omnivores followed by bacterial-feeding soil nematodes, while plant-feeding nematodes were prevalent in sugarcane field. The nematode diversity was higher in the remaining of Atlantic Forest. However, the soil mechanical resistance was higher under sugarcane cropping, affecting more directly the free-living nematodes; especially Dorylaimidae which was the most sensible to changes in soil physical properties.

Joint interpretation of seismic tomography and new magnetotelluric results provide evidence for support of high topography in the Southern Rocky Mountains and High Plains of eastern Colorado, USA

NASA Astrophysics Data System (ADS)

Feucht, D. W.; Sheehan, A. F.; Bedrosian, P.

2015-12-01

A recent magnetotelluric (MT) survey in central Colorado, USA, when interpreted alongside existing seismic tomography, reveals potential mechanisms of support for high topography both regionally and locally. Broadband and long period magnetotelluric data were collected at twenty-three sites along a 330 km E-W profile across the Southern Rocky Mountains and High Plains of central North America as part of the Deep RIFT Electrical Resistivity (DRIFTER) experiment. Remote-reference data processing yielded high quality MT data over a period range of 100 Hz to 10,000 seconds. A prominent feature of the regional geo-electric structure is the Denver Basin, which contains a thick package of highly conductive shales and porous sandstone aquifers. One-dimensional forward modeling was performed on stations within the Denver Basin to estimate depth to the base of this shallow conductor. Those estimates were then used to place a horizontal penalty cut in the model mesh of a regularized two-dimensional inversion. Two-dimensional modeling of the resistivity structure reveals two major anomalous regions in the lithosphere: 1) a high conductivity region in the crust under the tallest peaks of the Rocky Mountains and 2) a lateral step increase in lithospheric resistivity beneath the plains. The Rocky Mountain crustal anomaly coincides with low seismic wave speeds and enhanced heat flow and is thus interpreted as evidence of partial melt and/or high temperature fluids emplaced in the crust by tectonic activity along the Rio Grande Rift. The lateral variation in the mantle lithosphere, while co-located with a pronounced step increase in seismic velocity, appears to be a gradational boundary in resistivity across eastern Colorado and could indicate a small degree of compositional modification at the edge of the North American craton. These inferred conductivity mechanisms, namely crustal melt and modification of mantle lithosphere, likely contribute to high topography locally in the Rocky Mountains and regionally in the High Plains.

Our first decade of experience in deep brain stimulation of the brainstem: elucidating the mechanism of action of stimulation of the ventrolateral pontine tegmentum.

PubMed

Mazzone, Paolo; Vilela Filho, Osvaldo; Viselli, Fabio; Insola, Angelo; Sposato, Stefano; Vitale, Flora; Scarnati, Eugenio

2016-07-01

The region of the pedunculopontine tegmental nucleus (PPTg) has been proposed as a novel target for deep brain stimulation (DBS) to treat levodopa resistant symptoms in motor disorders. Recently, the anatomical organization of the brainstem has been revised and four new distinct structures have been represented in the ventrolateral pontine tegmentum area in which the PPTg was previously identified. Given this anatomical reassessment, and considering the increasing of our experience, in this paper we revisit the value of DBS applied to that area. The reappraisal of clinical outcomes in the light of this revisitation may also help to understand the consequences of DBS applied to structures located in the ventrolateral pontine tegmentum, apart from the PPTg. The implantation of 39 leads in 32 patients suffering from Parkinson's disease (PD, 27 patients) and progressive supranuclear palsy (PSP, four patients) allowed us to reach two major conclusions. The first is that the results of the advancement of our technique in brainstem DBS matches the revision of brainstem anatomy. The second is that anatomical and functional aspects of our findings may help to explain how DBS acts when applied in the brainstem and to identify the differences when it is applied either in the brainstem or in the subthalamic nucleus. Finally, in this paper we discuss how the loss of neurons in brainstem nuclei occurring in both PD and PSP, the results of intraoperative recording of somatosensory evoked potentials, and the improvement of postural control during DBS point toward the potential role of ascending sensory pathways and/or other structures in mediating the effects of DBS applied in the ventrolateral pontine tegmentum region.

Results of Simulated Galactic Cosmic Radiation (GCR) and Solar Particle Events (SPE) on Spectra Restraint Fabric

NASA Technical Reports Server (NTRS)

Peters, Benjamin; Hussain, Sarosh; Waller, Jess

2017-01-01

Spectra or similar Ultra-high-molecular-weight polyethylene (UHMWPE) fabric is the likely choice for future structural space suit restraint materials due to its high strength-to-weight ratio, abrasion resistance, and dimensional stability. During long duration space missions, space suits will be subjected to significant amounts of high-energy radiation from several different sources. To insure that pressure garment designs properly account for effects of radiation, it is important to characterize the mechanical changes to structural materials after they have been irradiated. White Sands Test Facility (WSFTF) collaborated with the Crew and Thermal Systems Division at the Johnson Space Center (JSC) to irradiate and test various space suit materials by examining their tensile properties through blunt probe puncture testing and single fiber tensile testing after the materials had been dosed at various levels of simulated GCR and SPE Iron and Proton beams at Brookhaven National Laboratories. The dosages were chosen based on a simulation developed by the Structural Engineering Division at JSC for the expected radiation dosages seen by space suit softgoods seen on a Mars reference mission. Spectra fabric tested in the effort saw equivalent dosages at 2x, 10x, and 20x the predicted dose as well as a simulated 50 year exposure to examine the range of effects on the material and examine whether any degradation due to GCR would be present if the suit softgoods were stored in deep space for a long period of time. This paper presents the results of this work and outlines the impact on space suit pressure garment design for long duration deep space missions.

Live Cell Imaging of Butterfly Pupal and Larval Wings In Vivo

PubMed Central

Ohno, Yoshikazu; Otaki, Joji M.

2015-01-01

Butterfly wing color patterns are determined during the late larval and early pupal stages. Characterization of wing epithelial cells at these stages is thus critical to understand how wing structures, including color patterns, are determined. Previously, we successfully recorded real-time in vivo images of developing butterfly wings over time at the tissue level. In this study, we employed similar in vivo fluorescent imaging techniques to visualize developing wing epithelial cells in the late larval and early pupal stages 1 hour post-pupation. Both larval and pupal epithelial cells were rich in mitochondria and intracellular networks of endoplasmic reticulum, suggesting high metabolic activities, likely in preparation for cellular division, polyploidization, and differentiation. Larval epithelial cells in the wing imaginal disk were relatively large horizontally and tightly packed, whereas pupal epithelial cells were smaller and relatively loosely packed. Furthermore, larval cells were flat, whereas pupal cells were vertically elongated as deep as 130 μm. In pupal cells, many endosome-like or autophagosome-like structures were present in the cellular periphery down to approximately 10 μm in depth, and extensive epidermal feet or filopodia-like processes were observed a few micrometers deep from the cellular surface. Cells were clustered or bundled from approximately 50 μm in depth to deeper levels. From 60 μm to 80 μm in depth, horizontal connections between these clusters were observed. The prospective eyespot and marginal focus areas were resistant to fluorescent dyes, likely because of their non-flat cone-like structures with a relatively thick cuticle. These in vivo images provide important information with which to understand processes of epithelial cell differentiation and color pattern determination in butterfly wings. PMID:26107809

Live Cell Imaging of Butterfly Pupal and Larval Wings In Vivo.

PubMed

Ohno, Yoshikazu; Otaki, Joji M

2015-01-01

Butterfly wing color patterns are determined during the late larval and early pupal stages. Characterization of wing epithelial cells at these stages is thus critical to understand how wing structures, including color patterns, are determined. Previously, we successfully recorded real-time in vivo images of developing butterfly wings over time at the tissue level. In this study, we employed similar in vivo fluorescent imaging techniques to visualize developing wing epithelial cells in the late larval and early pupal stages 1 hour post-pupation. Both larval and pupal epithelial cells were rich in mitochondria and intracellular networks of endoplasmic reticulum, suggesting high metabolic activities, likely in preparation for cellular division, polyploidization, and differentiation. Larval epithelial cells in the wing imaginal disk were relatively large horizontally and tightly packed, whereas pupal epithelial cells were smaller and relatively loosely packed. Furthermore, larval cells were flat, whereas pupal cells were vertically elongated as deep as 130 μm. In pupal cells, many endosome-like or autophagosome-like structures were present in the cellular periphery down to approximately 10 μm in depth, and extensive epidermal feet or filopodia-like processes were observed a few micrometers deep from the cellular surface. Cells were clustered or bundled from approximately 50 μm in depth to deeper levels. From 60 μm to 80 μm in depth, horizontal connections between these clusters were observed. The prospective eyespot and marginal focus areas were resistant to fluorescent dyes, likely because of their non-flat cone-like structures with a relatively thick cuticle. These in vivo images provide important information with which to understand processes of epithelial cell differentiation and color pattern determination in butterfly wings.

Roles and Relations in Language Deep Structure. Studies in Language Education, Report No. 9.

ERIC Educational Resources Information Center

O'Donnell, Roy C.

This essay discusses a theory of grammar which incorporated Chomsky's distinction between deep and surface structure and accepts Fillmore's proposal to exclude such subject and concepts as direct object from the base structure. While recognizing the need for specifying an underlying set of caselike relations, it is proposed that this need can best…

Effects of Link Annotations on Search Performance in Layered and Unlayered Hierarchically Organized Information Spaces.

ERIC Educational Resources Information Center

Fraser, Landon; Locatis, Craig

2001-01-01

Investigated the effects of link annotations on high school user search performance in Web hypertext environments having deep (layered) and shallow link structures. Results confirmed previous research that shallow link structures are better than deep (layered) link structures, and also showed that annotations had virtually no effect on search…

Deep-towed CSEM survey of gas hydrates in the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Kannberg, P.; Constable, S.

2017-12-01

Controlled source electromagnetic (CSEM) surveys are increasingly being used to remotely detect hydrate deposits in seafloor sediments. CSEM methods are sensitive to sediment pore space resistivity, such as when electrically resistive hydrate displaces the electrically conductive pore fluid, increasing the bulk resistivity of the sediment. In July 2017, a two-week research cruise using an upgraded and expanded "Vulcan" towed receiver system collected over 250 line km of data at four sites in the Gulf of Mexico (GoM) thought to have hydrate bearing sediments. Hydrate bearing horizons at the survey sites ranged from 400-700 m below seafloor. Modeling suggested an array with source receiver offsets of up to 1600 m would be needed to properly image the deep hydrate. A deep towed electromagnetic transmitter outputting 270 Amps was towed 100 m above seafloor. Six Vulcan receivers, each recording three-axis electric field data, were towed at 200 m intervals from 600-1600 m behind the transmitter. The four sites surveyed, Walker Ridge 313, Orca Basin, Mad Dog, and Green Canyon 955, are associated with the upcoming GOM^2 coring operation scheduled for 2020. Wells at WR313 and GC955 were logged as part of a joint industry drilling project in 2009 and will be used to ground truth our inversion results. In 2008, WR313 and GC955 were surveyed using traditional CSEM seafloor receivers, accompanied by a single prototype Vulcan towed receiver. This prior survey will allow comparison of results from a seafloor receiver survey with those from a towed receiver survey. Seismic data has been collected at all the sites, which will be used to constrain inversions. In addition to the four hydrate sites surveyed, two lines were towed over Green Knoll, a deep-water salt dome located between Mad Dog and GC955. Presented here are initial results from our recent cruise.

Preliminary Geophysical Characterization of a CO2-Driven Geyser in the Rio Grande Rift, New Mexico

NASA Astrophysics Data System (ADS)

Feucht, D. W.; Jensen, K. J.; Kelly, C.; Ryan, J. C.; Ferriz, H.; Kanjorski, N.; Ferguson, J. F.; McPhee, D. K.; Pellerin, L.

2009-12-01

As part of the Summer of Applied Geophysical Experience (SAGE) a preliminary geophysical investigation was conducted in the vicinity of a cold CO2-driven geyser located at Chimayó, NM, along the eastern margin of the Rio Grand Rift. This geyser is of interest as a possible analog for CO2 leakage from deep saline-aquifer carbon sequestration projects. Observed water chemistry variations can be explained by mixing of a CO2-rich, high salinity brine rising into, and mixing with a shallow freshwater aquifer. Several large, basin bounding faults and numerous smaller normal faults cut the area of the well and may constitute the necessary conduit for the deep water. Geophysical methods were used to characterize the subsurface properties at the Chimayó geyser as well as regional structures that may influence groundwater flow in the area. Shallow transient electromagnetic (TEM) data and capactively-coupled resistivity (CCR) data were acquired in close proximity to the geyser. The CCR shows a near-surface resistive feature, possibly hematite-cemented Tesuque formation sediment, in close proximity to the geyser. A shallow, highly conductive layer delineated through modeling of the TEM data is postulated to be a fluid consistent with high levels of Total Dissolved Solid (TDS) content. The well is located almost directly on the Roberts fault, which is antithetic to the basin bounding Chimayó fault 1.5 km to the east. Previously published hydrogeochemical studies associate this fault with high CO2 and TDS water along its strike. Deeper sounding TEM and audiomagnetotelluric (AMT) data were acquired along the Alamo Arroyo, 3 km to the southwest of the well. The Kelley Federal #1 Well located in this arroyo provides deep stratigraphic control to Pennsylvanian carbonate basement at 740 m. Tesuque formation conglomeritic alluvial fan deposits occur between 230 and 708 m and are overlain by finer grained basin floor deposits. The deep, coarse grained unit is thought to be a good, freshwater aquifer. A 2-D model of the AMT data indicates a resistive layer at about 200 m depth, which may correspond to the aquifer. High conductivity observed in the TEM and AMT data likely reflects saline fluids. Gravity data were collected at approximately 500 m station spacing along transects in Arroyo Alamo and Arroyo Seco 2 km to the south, and throughout the Chimayó Valley. The new data, combined with previously collected data, were used to create regional complete Bouguer anomaly and depth to basement maps. Two-dimensional forward models were constructed to provide a geohydrologic framework consistent with migration of CO2 rich brine up the Chimayó fault to mix with freshwater in the conglomeritic aquifer. The shallow, mixed groundwater emerges at the surface along the Roberts fault and drives the geyser at the Roberts well.

Imaging deep skeletal muscle structure using a high-sensitivity ultrathin side-viewing optical coherence tomography needle probe

PubMed Central

Yang, Xiaojie; Lorenser, Dirk; McLaughlin, Robert A.; Kirk, Rodney W.; Edmond, Matthew; Simpson, M. Cather; Grounds, Miranda D.; Sampson, David D.

2013-01-01

We have developed an extremely miniaturized optical coherence tomography (OCT) needle probe (outer diameter 310 µm) with high sensitivity (108 dB) to enable minimally invasive imaging of cellular structure deep within skeletal muscle. Three-dimensional volumetric images were acquired from ex vivo mouse tissue, examining both healthy and pathological dystrophic muscle. Individual myofibers were visualized as striations in the images. Degradation of cellular structure in necrotic regions was seen as a loss of these striations. Tendon and connective tissue were also visualized. The observed structures were validated against co-registered hematoxylin and eosin (H&E) histology sections. These images of internal cellular structure of skeletal muscle acquired with an OCT needle probe demonstrate the potential of this technique to visualize structure at the microscopic level deep in biological tissue in situ. PMID:24466482

3D characterization of the critical zone within a basaltic catchment using an airborne electromagnetic survey

NASA Astrophysics Data System (ADS)

Dumont, Marc; Join, Jean-Lambert; Wendling, Valentin; Aunay, Bertrand

2017-04-01

Shield volcano islands come from the succession of constructive phases and destructive phases. In this complex geological setting, weathering and paleo-weathering profiles have a major impact on the critical zone hydrology. Nevertheless those underground structures are difficult to characterize, which leads to a leak of understanding of the water balance, infiltration, and ground water flows. Airborne transient electromagnetic method, as SkyTEM dispositive, allows to proceed regional 3D resistivity mapping with almost no topographic and vegetation limitations with an investigation depth higher than 300 m. Electromagnetics results are highly sensitive to conductive layers depending of clay content, water content and water mineralization. Skytem investigations are useful to characterize the thickness of the weathering profile and its lateral variations among large areas. In addition, it provides precise information about buried valleys and paleo-weathering of older lavas flows which control preferential groundwater flows. The French Geological Survey (BRGM) conducted a SkyTEM survey over Reunion Island (2500 km2). This survey yields on a dense 3D resistivity mapping. This continuous information is used to characterize the critical zone of the experimental watershed of Rivière des Pluies. A wide range of weathering profiles has been identified. Their variations are highly dependent of lava flow ages. Furthermore, 3D resistivity model highlights buried valleys characterized by specific weathering due to groundwater flows. Hydrogeological implication is a partitioning of groundwater flows in three different reservoirs: (i) deep basal aquifer, (ii) perched aquifers and (iii) superficial flows. The two latter behaviors have been characterized and mapped above our experimental watershed. The 3D manner of airborne electromagnetics results allows describing the continuity of weathering and alteration structures. The identification of specific groundwater flow paths provides a better understanding of the relation between the surface hydrology, the unsaturated medium and the basal aquifer. This study underlines the key role of volcanic underground structures in the critical zone flows.

Characterization of 193-nm resists for optical mask manufacturing

NASA Astrophysics Data System (ADS)

Fosshaug, Hans; Paulsson, Adisa; Berzinsh, Uldis; Magnusson, Helena

2004-12-01

The push for smaller linewidths and tighter critical dimension (CD) budgets forced manufacturers of optical pattern generators to move from traditional i-line to deep ultraviolet (DUV) resist processing. Entering the DUV area was not without pain. The process conditions, especially exposure times of a few hours, put very tough demands on the resist material itself. However, today 248nm laser writers are fully operating using a resist process that exhibits the requested resolution, CD uniformity and environmental stability. The continuous demands of CD performance made Micronic to investigate suitable resist candidate materials for the next generation optical writer using 193nm excimer laser exposure. This paper reports on resist benchmarking of one commercial as well as several newly developed resists. The resists were investigated using a wafer scanner. The data obtained illustrate the current performance of 193nm photoresists, and further demonstrate that despite good progress in resist formulation optimization, the status is still a bit from the required lithographic performance.

The BOrborema Deep Electromagnetic and Seismic (BODES) Experiment

NASA Astrophysics Data System (ADS)

Julià, J.; Garcia, X.; Medeiros, W. E.; Farias do Nascimento, A.

2015-12-01

The Borborema Province of NE Brazil is a large Precambrian domain of the Brazilian shield located in the Northeasternmost corner of South America. It is bounded by the Parnaíba basin to the West and by the São Francisco craton to the South. Its structuration in the Precambrian has been related to compressional processes during the Brasiliano-Pan African orogeny (600-550 Ma). In the Mesozoic, extensional stresses eventually leading to continental breakup, left a number of aborted rift basins within the Province. After continental breakup, the evolution of the Province was marked by episodes of uplift, which might have been coeval with episodes of Cenozoic volcanism. The most prominent expression of those uplift processes is the Borborema Plateau, an elliptically shaped topographic feature in the eastern half of the Province with maximum elevations of ~1200 m. The origin of uplift in the Plateau has been the focus of a number of multi-institutional and multi-disciplinary studies in the past few years, which have imaged the deep structure of the eastern Province with unprecedented detail. The origin of uplift in the western Province, which includes a superb example of basin inversion demonstrated by the ~1000 km elevations of the Chapada do Araripe, however, has been seldom investigated. With the goal of investigating the deep structure of the western Province, a temporary network of 10 collocated seismic and magnetotelluric stations was deployed in the region. The collocated stations were arranged in an approximately NS direction, with an interspation spacing of ~70 km and spanning a total length of ~600 km. The seismic stations consisted of broadband sensors (RefTek 151B-120 "Observer") sampling at 100 Hz and were deployed in January 2015; the MT stations consisted of long-period magnetotelluric (LEMI) systems, sampling at 1 Hz and 4 Hz, and were deployed in April 2015 for a period of ~2 weeks. Preliminary results based on teleseismic P-wave receiver functions suggest that the crust thickens towards the South, from 33 km in the Ceará domain to 44 km in the São Francisco craton. Preliminary analyis of MT data suggests a heterogeneous lithosphere, with marked changes in electrical properties around the Chapada do Araripe and a marked resistive structure towards the South, where the profile enters the São Francisco craton.

Formation of nanotunnels inside a resist film in laser interference lithography.

PubMed

Wei, Qi; Hu, Fanhua; Wang, Liyuan

2015-05-19

A few kinds of 2-diazo-1-naphthoquinone-4-sulfonates of poly(4-hydroxylstyrene) were prepared to form one-component i-line photoresists. In the laser interference lithography experiments of some of the photoresists, nanotunnels were observed to be aligned in the interior of the resist film. The shape and size of the nanotunnels remain virtually unchanged even under an increased exposure dose, indicating that the exposure energy is confined within the tunnel space. The formation of the nanotunnels results from the effect of standing waves and the permeation of developer from the surface deep into the resist films.

Geophysical investigation of liquefaction and surface ruptures at selected sites in Oklahoma post the 2016 Mw 5.8 Pawnee, OK earthquake

NASA Astrophysics Data System (ADS)

Kolawole, F.; Ismail, A. M.; Pickens, C. M.; Beckendorff, D.; Mayle, M. V.; Goussi, J. F.; Nyalugwe, V.; Aghayan, A.; Tim, S.; Atekwana, E. A.

2016-12-01

To date, the Mw 5.8 Pawnee, Oklahoma, earthquake on September 3, 2016 produced the largest moment release in the central and eastern United States, linked to saline waste water injection into the underlying formations. This earthquake occurred in a region of complex fault interactions, and typical of most of the earthquake activity in Oklahoma the earthquake ruptured a previously unknown left-lateral strike-slip fault striking 109°. Moreover, unlike the 2011 Mw 5.7 Prague, Oklahoma earthquake, the Pawnee earthquake produced surface deformation including fractures and liquefaction features. In this study, we use high resolution electrical resistivity, ground penetrating radar (GPR) and surface fracture mapping to image the zones of surface disruption. Our objective was to report some of the near-surface deformations that are associated with the recent earthquake and compare them with deep structures. We selected two sites for this study. We observed linear fractures and liquefaction at the first site which is 5 km away from the earthquake epicenter, while the second site, 7.5 km away from the epicenter, showed mostly curvilinear fractures. The resistivity and GPR sections showed indication of saturated sediments at about 2 m - 5 m below ground surface and settlement-sag structure within the liquefaction dominated area, and less saturated sediments in areas dominated by fractures only. GPS mapping of fractures at the first site revealed a pattern of en-echelon fractures oriented 93°-116°, sub-parallel to the orientation of the slip direction of the earthquake, while the fractures at the second site trend along the bank of a river meander. We infer that the liquefaction was enhanced by the occurrence of loose, wet, fluvial deposits of the Arkansas River flood plain and adequate near-surface pore pressure at the liquefaction dominated areas. Our results suggest the greater influence of surface morphological heterogeneity on the ruptures farther away from the epicenter, while the relationship between the deep structures, displacement kinematics and the linear fractures closer to the epicenter are unclear. We conclude that high resolution geophysical imaging can be used as a rapid response tool for evaluating areas susceptible to failure during earthquakes and can help improve hazard mitigation measures.

Metabolic and Circulatory Responses to Walking and Jogging in Water.

ERIC Educational Resources Information Center

Evans, Blanch W.

1978-01-01

Water resistance makes running or walking through waist-deep water more strenuous than when performed under normal conditions; however, the buoyancy of the water reduces the stress on weight-bearing muscles and joints. (MM)

The Unicorn Cave, Southern Harz Mountains, Germany: From known passages to unknown extensions with the help of geophysical surveys

NASA Astrophysics Data System (ADS)

Kaufmann, Georg; Nielbock, Ralf; Romanov, Douchko

2015-12-01

In soluble rocks (limestone, dolomite, anhydrite, gypsum, …), fissures and bedding partings can be enlarged with time by both physical and chemical dissolution of the host rock. With time, larger cavities evolve, and a network of cave passages can evolve. If the enlarged cave voids are not too deep under the surface, geophysical measurements can be used to detect, identify and trace these karst structures, e.g.: (i) gravity revealing air- and sediment-filled cave voids through negative Bouguer anomalies, (ii) electrical resistivity imaging (ERI) mapping different infillings of cavities either as high resistivities from air-filled voids or dry soft sediments, or low resistivities from saturated sediments, and (iii) groundwater flow through electrical potential differences (SP) arising from dislocated ionic charges from the walls of the underground flow paths. We have used gravity, ERI, and SP methods both in and above the Unicorn Cave located in the southern Harz Mountains in Germany. The Unicorn Cave is a show cave developed in the Werra dolomite formation of the Permian Zechstein sequence, characterised by large trunk passages interrupted by larger rooms. The overburden of the cave is only around 15 m, and passages are filled with sediments reaching infill thicknesses up to 40 m. We present results from our geophysical surveys above the known cave and its northern and southern extension, and from the cave interior. We identify the cave geometry and its infill from gravity and ERI measurements, predict previously unknown parts of the cave, and subsequently confirm the existence of these new passages through drilling. From the wealth of geophysical data acquired we derive a three-dimensional structural model of the Unicorn Cave and its surrounding, especially the cave infill.

Electromagnetic Studies Using The Cam-1 (lisbon-madeira) Submarine Cable

NASA Astrophysics Data System (ADS)

Monteiro Santos, F.; Soares, A.; Rodrigues, H.; Luzio, R.; Nolasco, R.; Iso-3D Team

Data of electrical voltage measured between the ends of the CAM-1 cable have been analysed in order to determine the electrical stability of the cable and to obtain some preliminary information related to water transport. The monthly average of the po- tential measured during days with low geomagnetic activity suggests a periodicity of 120 days that was tentatively interpreted as having origin in water flow. These results show a small trend that is compatible with no drift in the cable. The mean electric field estimated from quiet days is 0.206 s´ 0.022 mV/km. The voltage measurements have been used, in combination with magnetic observations carried out in the geomagnetic observatory of Guimar (Canary Islands), to estimate the deep geoelectrical structure beneath the ocean. Apparent resistivities and phases were calculated from those data sets. Magnetic transfer function (tipper) measured in two long period (magnetovari- ational) stations located near the coast line, and the invariant apparent resistivity and phase obtained at one site in SW Iberia were used in the modelling in order to bet- ter constraint some model parameters. The result obtained by one- two- and three- dimensional trial-and-error modelling suggests a three-layer geoelectrical structure beneath the ocean. The conductance of the uppermost layer, representing sea-water and marine sediments, is most likely in the range between 15700 and 18500 S. The most probable order of the integral resistivity of the lithosphere layer in marine part is 4x107 ohm m2. ISO-3D team: M. Sinha (U. Cambridge/U. Southampton), J.M. Miranda (CGUL), A. Junge (U. Frankfurt), A. Flosadottir (HALO), N. Lourenço and J. Luís (U. Algarve), L. MacGregor, S. Dean, N. Barker, S. Riches and Z. Cheng (U. Cambridge/U. Southamp- ton).

Results of a magnetotelluric traverse across western Oregon: crustal resistivity structure and the subduction of the Juan de Fuca plate

NASA Astrophysics Data System (ADS)

Waff, Harve S.; Rygh, John T.; Livelybrooks, Dean W.; Clingman, William W.

1988-02-01

As part of project EMSLAB, we have collected and analysed wideband magnetotelluric data along an east-west transect in western Oregon. Preliminary modelling of the data using one-dimensional inversions based upon rotationally-invariant earth response functions was followed by finite-element two-dimensional modelling. The models produced indicate the presence of an electrical conductor beneath the Oregon Coast Range dipping eastward at 12-18° from a depth of 23-32 km. We believe that this conductor includes the thrust surface of the subducting Juan de Fuca plate and/or adjacent water-saturated rocks. Its high conductance (about 200 S) is thought to be due to one or more of the following mechanisms: (1) sediments subducted atop and with the Juan de Fuca plate, (2) saline fluids produced by dehydration of the former, or (3) seawater contained within subducted oceanic basalts. There is a distinct possibility that the high conductivity is due primarily to the presence of subducted sediments, in contrast with the notion that the subduction of young, buoyant lithosphere retards sediment subduction at this convergent margin. The conductive layer is overlain by relatively resistive rocks presumed to be accreted oceanic lithosphere. Model-determined resistivities for the upper part of the Coast Range section are in good agreement with deep well-log data. A strong electrical contrast appears in the determinant phase pseudosection between the Coast Range and the Willamette Valley suggesting a structural boundary between the two provinces. A surficial conductor is present in the valley to depths of 1-2 km and is due to alluvial fill. Induction arrow data show the geomagnetic coast effect and a smaller effect by the Willamette Valley alluvial fill.

Electromagnetic imaging of seafloor massive sulfide deposits at the Central Indian Ridge

NASA Astrophysics Data System (ADS)

Müller, Hendrik; Schwalenberg, Katrin

2016-04-01

Electromagnetics is considered to become a key method to evaluate the spatial extent, composition, and inner structure of Seafloor Massive Sulfide (SMS) deposits that contain potentially high grades of polymetallic minerals - essential ingredients for the growing high-tech industry. On land, airborne or ground electromagnetic methods are established as standard geophysical tools for locating and mapping massive sulfide deposits. In contrast to terrestrial systems, marine EM instrumentation to locate the heterogeneous and often sediment covered ore deposits are still in their infancy. To accomplish EM imaging of such complex deep sea environments, the GOLDEN EYE deep sea profiler has been developed at the University of Bremen by contract of the BGR, based on experiences with the MARUM NERIDIS benthic EM Profiler. GOLDEN EYE lands on the seafloor or glides with well constrained ground distance and is entirely controlled from the vessel. The rigid, circular fiberglass platform of 3.5 m in diameter hosts a frequency domain EM inloop sensor with horizontal transmitter of 3.34 m diameter and coaxial receiver and bucking coils. Operation frequencies between 10 and 20,000 Hz can be combined and jointly inverted to resolve the resistivity structure of the topmost 10 to 15 meters below seafloor with high lateral and near-surface resolution. We will present the concept and development state of this deep sea electromagnetic profiler, and first results from a recent cruise to the Edmond hydrothermal vent field in 3 km water depth. Preliminary analysis of the new data reveal electric conductivity values of more than 10 S/m associated with active and inactive SMS deposits. Simultaneously collected DC magnetic data indicate a local positive magnetic anomaly associated with the active Edmond hydrothermal vent field while nearby fossil deposits are characterized by negative magnetic anomalies. First 1D inversion results provide insights into the vertical extend and overburden thickness of the SMS deposits.

QCD analysis of neutrino charged current structure function F2 in deep inelastic scattering

NASA Technical Reports Server (NTRS)

Saleem, M.; Aleem, F.

1985-01-01

An analytic expression for the neutrino charged current structure function F sub 2 (x, Q sup 2) in deep inelastic scattering, consistent with quantum chromodynamics, is proposed. The calculated results are in good agreement with experiment.

A combined methodology using electrical resistivity tomography, ordinary kriging and porosimetry for quantifying total C trapped in carbonate formations associated with natural analogues for CO2 leakage

NASA Astrophysics Data System (ADS)

Prado-Pérez, A. J.; Aracil, E.; Pérez del Villar, L.

2014-06-01

Currently, carbon deep geological storage is one of the most accepted methods for CO2 sequestration, being the long-term behaviour assessment of these artificial systems absolutely essential to guarantee the safety of the CO2 storage. In this sense, hydrogeochemical modelling is being used for evaluating any artificial CO2 deep geological storage as a potential CO2 sinkhole and to assess the leakage processes that are usually associated with these engineered systems. Carbonate precipitation, as travertines or speleothems, is a common feature in the CO2 leakage scenarios and, therefore, is of the utmost importance to quantify the total C content trapped as a stable mineral phase in these carbonate formations. A methodology combining three classical techniques such as: electrical resistivity tomography, geostatistical analysis and mercury porosimetry is described in this work, which was developed for calculating the total amount of C trapped as CaCO3 associated with the CO2 leakages in Alicún de las Torres natural analogue (Granada, Spain). The proposed methodology has allowed estimating the amount of C trapped as calcite, as more than 1.7 Mt. This last parameter, focussed on an artificial CO2 deep geological storage, is essential for hydrogeochemical modellers when evaluating whether CO2 storages constitute or not CO2 sinkholes. This finding is extremely important when assessing the long-term behaviour and safety of any artificial CO2 deep geological storage.

Mobility of lightweight robots over snow

NASA Astrophysics Data System (ADS)

Lever, James H.; Shoop, Sally A.

2006-05-01

Snowfields are challenging terrain for lightweight (<50 kg) unmanned ground vehicles. Deep sinkage, high snowcompaction resistance, traction loss while turning and ingestion of snow into the drive train can cause immobility within a few meters of travel. However, for suitably designed vehicles, deep snow offers a smooth, uniform surface that can obliterate obstacles. Key requirements for good over-snow mobility are low ground pressure, large clearance relative to vehicle size and a drive system that tolerates cohesive snow. A small robot will invariably encounter deep snow relative to its ground clearance. Because a single snowstorm can easily deposit 30 cm of fresh snow, robots with ground clearance less than about 10 cm must travel over the snow rather than gain support from the underlying ground. This can be accomplished using low-pressure tracks (< 1.5 kPa). Even still, snow-compaction resistance can exceed 20% of vehicle weight. Also, despite relatively high traction coefficients for low track pressures, differential or skid steering is difficult because the outboard track can easily break traction as the vehicle attempts to turn against the snow. Short track lengths (relative to track separation) or coupled articulated robots offer steering solutions for deep snow. This paper presents preliminary guidance to design lightweight robots for good mobility over snow based on mobility theory and tests of PackBot, Talon and SnoBot, a custom-designed research robot. Because many other considerations constrain robot designs, this guidance can help with development of winterization kits to improve the over-snow performance of existing robots.

All-photonic drying and sintering process via flash white light combined with deep-UV and near-infrared irradiation for highly conductive copper nano-ink

PubMed Central

Hwang, Hyun-Jun; Oh, Kyung-Hwan; Kim, Hak-Sung

2016-01-01

We developed an ultra-high speed photonic sintering method involving flash white light (FWL) combined with near infrared (NIR) and deep UV light irradiation to produce highly conductive copper nano-ink film. Flash white light irradiation energy and the power of NIR/deep UV were optimized to obtain high conductivity Cu films. Several microscopic and spectroscopic characterization techniques such as scanning electron microscopy (SEM), a x-ray diffraction (XRD), and Fourier-transform infrared (FT-IR) spectroscopy were employed to characterize the Cu nano-films. Optimally sintered Cu nano-ink films produced using a deep UV-assisted flash white light sintering technique had the lowest resistivity (7.62 μΩ·cm), which was only 4.5-fold higher than that of bulk Cu film (1.68 μΩ•cm). PMID:26806215

All-photonic drying and sintering process via flash white light combined with deep-UV and near-infrared irradiation for highly conductive copper nano-ink.

PubMed

Hwang, Hyun-Jun; Oh, Kyung-Hwan; Kim, Hak-Sung

2016-01-25

We developed an ultra-high speed photonic sintering method involving flash white light (FWL) combined with near infrared (NIR) and deep UV light irradiation to produce highly conductive copper nano-ink film. Flash white light irradiation energy and the power of NIR/deep UV were optimized to obtain high conductivity Cu films. Several microscopic and spectroscopic characterization techniques such as scanning electron microscopy (SEM), a x-ray diffraction (XRD), and Fourier-transform infrared (FT-IR) spectroscopy were employed to characterize the Cu nano-films. Optimally sintered Cu nano-ink films produced using a deep UV-assisted flash white light sintering technique had the lowest resistivity (7.62 μΩ·cm), which was only 4.5-fold higher than that of bulk Cu film (1.68 μΩ•cm).

Predator-guided sampling reveals biotic structure in the bathypelagic.

PubMed

Benoit-Bird, Kelly J; Southall, Brandon L; Moline, Mark A

2016-02-24

We targeted a habitat used differentially by deep-diving, air-breathing predators to empirically sample their prey's distributions off southern California. Fine-scale measurements of the spatial variability of potential prey animals from the surface to 1,200 m were obtained using conventional fisheries echosounders aboard a surface ship and uniquely integrated into a deep-diving autonomous vehicle. Significant spatial variability in the size, composition, total biomass, and spatial organization of biota was evident over all spatial scales examined and was consistent with the general distribution patterns of foraging Cuvier's beaked whales (Ziphius cavirostris) observed in separate studies. Striking differences found in prey characteristics between regions at depth, however, did not reflect differences observed in surface layers. These differences in deep pelagic structure horizontally and relative to surface structure, absent clear physical differences, change our long-held views of this habitat as uniform. The revelation that animals deep in the water column are so spatially heterogeneous at scales from 10 m to 50 km critically affects our understanding of the processes driving predator-prey interactions, energy transfer, biogeochemical cycling, and other ecological processes in the deep sea, and the connections between the productive surface mixed layer and the deep-water column. © 2016 The Author(s).

Improving resistivity survey resolution at sites with limited spatial extent using buried electrode arrays

NASA Astrophysics Data System (ADS)

Kiflu, H.; Kruse, S.; Loke, M. H.; Wilkinson, P. B.; Harro, D.

2016-12-01

Electrical resistivity tomography (ERT) surveys are widely used in geological, environmental and engineering studies. However, the effectiveness of surface ERT surveys is limited by decreasing resolution with depth and near the ends of the survey line. Increasing the array length will increase depth of investigation, but may not be possible at urban sites where access is limited. One novel method of addressing these limitations while maintaining lateral coverage is to install an array of deep electrodes. Referred to here as the Multi-Electrode Resistivity Implant Technique (MERIT), self-driving pointed electrodes are implanted at depth below each surface electrode in an array, using direct-push technology. Optimal sequences of readings have been identified with the "Compare R" method of Wilkinson. Numerical, laboratory, and field case studies are applied to examine the effectiveness of the MERIT method, particularly for use in covered karst terrain. In the field case studies, resistivity images are compared against subsurface structure defined from borings, GPR surveys, and knowledge of prior land use. In karst terrain where limestone has a clay overburden, traditional surface resistivity methods suffer from lack of current penetration through the shallow clay layer. In these settings, the MERIT method is found to improve resolution of features between the surface and buried array, as well as increasing depth of penetration and enhancing imaging capabilities at the array ends. The method functions similar to a cross-borehole array between horizontal boreholes, and suffers from limitations common to borehole arrays. Inversion artifacts are common at depths close to the buried array, and because some readings involve high geometric factors, inversions are more susceptible to noise than traditional surface arrays. Results are improved by using errors from reciprocal measurements to weight the data during the inversion.

Trophic Pathways of the Mid-North Atlantic

EPA Science Inventory

Because deep-sea fisheries are increasing as coastal fisheries decline, fisheries scientists need baseline data on deep-sea ecosystems prior to further development of deep-water fisheries. We present preliminary results and ongoing efforts to characterize the trophic structure a...

Groundwater and Thaw Legacy of a Large Paleolake in Taylor Valley, East Antarctica as Evidenced by Airborne Electromagnetic and Sedimentological Techniques

NASA Astrophysics Data System (ADS)

Doran, P. T.; Myers, K. F.; Foley, N.; Tulaczyk, S. M.; Dugan, H. A.; Auken, E.; Mikucki, J.; Virginia, R. A.

2017-12-01

The McMurdo Dry Valleys (MDVs) in east Antarctica contain a number of perennial ice-covered lakes fed by ephemeral meltwater streams. Lake Fryxell in Taylor Valley, is roughly 5.5 km long and approximately 22 m deep. Paleodeltas and paleoshorelines throughout Fryxell Basin provide evidence of significant lake level change occurring since the Last Glacial Maximum (LGM). During the LGM, grounded ice in the Ross Sea extended into the eastern portion of Taylor Valley, creating a large ice dammed paleolake. Glacial Lake Washburn (GLW) was roughly 300 m higher than modern day Lake Fryxell and its formation and existence has been debated. In this study, we use Geographical Information System and remote sensing techniques paired with regional resistivity data to provide new insight into the paleohydrology of the region. The existence of GLW is supported by new findings of a deep groundwater system beneath Lake Fryxell, which is interpreted as the degrading thaw bulb of GLW. Airborne resistivity data collected by SkyTEM, a time-domain airborne electromagnetic sensor system was used to map groundwater systems in the lake basin. Subsurface characteristics can be inferred from the relationship of resistivity to temperature, salinity, porosity, and degree of saturation. A large low resistivity region indicative of liquid water extends hundreds of meters away from the modern lake extent which is consistent with the presence of a degrading thaw bulb from GLW. As lake level in Fryxell Basin fell to modern levels, the saturated sediment beneath the lake began to freeze as it became exposed to low atmospheric temperatures. We hypothesize that this process is ongoing and will continue until equilibrium is reached between the geothermal gradient and atmospheric temperatures. Though liquid groundwater systems were previously thought to be minimal or nonexistent in the MDVs, regional resistivity data now show that extensive groundwater reservoirs exist beneath these lakes. In addition to the implications for the paleolake history of GLW, the presence of deep groundwater systems beneath MDV lakes has important implications for hydrologic and ecosystem connectivity in an environment which is largely driven by the availability of liquid water.

A Brief Review of Bioactive Metabolites Derived from Deep-Sea Fungi.

PubMed

Wang, Yan-Ting; Xue, Ya-Rong; Liu, Chang-Hong

2015-07-23

Deep-sea fungi, the fungi that inhabit the sea and the sediment at depths of over 1000 m below the surface, have become an important source of industrial, agricultural, and nutraceutical compounds based on their diversities in both structure and function. Since the first study of deep-sea fungi in the Atlantic Ocean at a depth of 4450 m was conducted approximately 50 years ago, hundreds of isolates of deep-sea fungi have been reported based on culture-dependent methods. To date more than 180 bioactive secondary metabolites derived from deep-sea fungi have been documented in the literature. These include compounds with anticancer, antimicrobial, antifungal, antiprotozoal, and antiviral activities. In this review, we summarize the structures and bioactivities of these metabolites to provide help for novel drug development.

A Brief Review of Bioactive Metabolites Derived from Deep-Sea Fungi

PubMed Central

Wang, Yan-Ting; Xue, Ya-Rong; Liu, Chang-Hong

2015-01-01

Deep-sea fungi, the fungi that inhabit the sea and the sediment at depths of over 1000 m below the surface, have become an important source of industrial, agricultural, and nutraceutical compounds based on their diversities in both structure and function. Since the first study of deep-sea fungi in the Atlantic Ocean at a depth of 4450 m was conducted approximately 50 years ago, hundreds of isolates of deep-sea fungi have been reported based on culture-dependent methods. To date more than 180 bioactive secondary metabolites derived from deep-sea fungi have been documented in the literature. These include compounds with anticancer, antimicrobial, antifungal, antiprotozoal, and antiviral activities. In this review, we summarize the structures and bioactivities of these metabolites to provide help for novel drug development. PMID:26213949

Hard Truths: Uncovering the Deep Structure of Schooling.

ERIC Educational Resources Information Center

Tye, Barbara Benham

The "deep structure of schooling" is composed of values and assumptions about education widely shared throughout our society. These values and assumptions are shaped by conventional wisdom, tradition, vested interests, and institutional inertia. Americans expect similarities in classrooms, policies, programs, pedagogy, resource allocation,…

Next-generation sequencing offers new insights into the resistance of Candida spp. to echinocandins and azoles.

PubMed

Garnaud, Cécile; Botterel, Françoise; Sertour, Natacha; Bougnoux, Marie-Elisabeth; Dannaoui, Eric; Larrat, Sylvie; Hennequin, Christophe; Guinea, Jesus; Cornet, Muriel; Maubon, Danièle

2015-09-01

MDR Candida strains are emerging. Next-generation sequencing (NGS), which enables extensive and deep genome analysis, was used to investigate echinocandin and azole resistance in clinical Candida isolates. Six genes commonly involved in antifungal resistance (ERG11, ERG3, TAC1, CgPDR1, FKS1 and FKS2) were analysed using NGS in 40 Candida isolates (18 Candida albicans, 15 Candida glabrata and 7 Candida parapsilosis). The strategy was validated using strains with known sequences. Then, 8 clinical strains displaying antifungal resistance and 23 sequential isolates collected from 10 patients receiving antifungal therapy were analysed. A total of 391 SNPs were detected, among which 6 coding SNPs were reported for the first time. Novel genetic alterations were detected in both azole and echinocandin resistance genes. A C. glabrata strain, which was resistant to echinocandins but highly susceptible to azoles, harboured an FKS2 S663P mutation plus a novel presumed loss-of-function CgPDR1 mutation. This isolate was from a patient with deep-seated and urinary candidiasis. Another C. glabrata isolate, with an MDR phenotype, carried a new FKS2 S663A mutation and a new putative gain-of-function CgPDR1 mutation (T370I); this isolate showed mutated (80%) and WT (20%) populations and was collected after 75 days of exposure to caspofungin from a patient who underwent complicated abdominal surgery. This study shows that NGS can be used for extensive assessment of genetic mutations involved in antifungal resistance. This type of wide genome approach will become very valuable for detecting mechanisms of resistance in clinical strains subjected to multidrug pressure. © The Author 2015. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Flexible deep brain neural probes based on a parylene tube structure

NASA Astrophysics Data System (ADS)

Zhao, Zhiguo; Kim, Eric; Luo, Hao; Zhang, Jinsheng; Xu, Yong

2018-01-01

Most microfabricated neural probes have limited shank length, which prevents them from reaching many deep brain structures. This paper reports deep brain neural probes with ultra-long penetrating shanks based on a simple but novel parylene tube structure. The mechanical strength of the parylene tube shank is temporarily enhanced during implantation by inserting a metal wire. The metal wire can be removed after implantation, making the implanted probe very flexible and thus minimizing the stress caused by micromotions of brain tissues. Optogenetic stimulation and chemical delivery capabilities can be potentially integrated by taking advantage of the tube structure. Single-shank prototypes with a shank length of 18.2 mm have been developed. The microfabrication process comprises of deep reactive ion etching (DRIE) of silicon, parylene conformal coating/refilling, and XeF2 isotropic silicon etching. In addition to bench-top insertion characterization, the functionality of developed probes has been preliminarily demonstrated by implanting into the amygdala of a rat and recording neural signals.

Deep Structure of Northern Apennines Subduction Orogen (Italy) as Revealed by a Joint Interpretation of Passive and Active Seismic Data

NASA Astrophysics Data System (ADS)

Piana Agostinetti, Nicola; Faccenna, Claudio

2018-05-01

The Apennines is a well-studied orogeny formed by the accretion of continental slivers during the subduction of the Adriatic plate, but its deep structure is still a topic of controversy. Here we illuminated the deep structure of the Northern Apennines belt by combining results from the analysis of active seismic (CROP03) and receiver function data. The result from combining these two approaches provides a new robust view of the structure of the deep crust/upper mantle, from the back-arc region to the Adriatic subduction zone. Our analysis confirms the shallow Moho depth beneath the back-arc region and defines the top of the downgoing plate, showing that the two plates separate at depth about 40 km closer to the trench than reported in previous reconstructions. This spatial relationship has profound implications for the geometry of the shallow subduction zone and of the mantle wedge, by the amount of crustal material consumed at trench.

Demonstration of Remotely Operated Vehicles to Aid Underwater Inspection of Corps of Engineers Navigation Structures. Winfield Locks and Dam 13-17 August 2007

DTIC Science & Technology

2008-09-01

2 Deep Ocean Engineering Triggerfish ...Figures Figure 1. Deep Ocean Engineering Triggerfish ROV carried by two divers (top)................................... 4 Figure 2. SeaBotix...the physical parameters and approximate costs of the systems as tested. Deep Ocean Engineering Triggerfish Figure 1 shows the Deep Ocean

Modification of LRFD resistance factors based on site variability : final report, November 2009.

DOT National Transportation Integrated Search

2009-11-01

Current practice by the Florida Department of Transportation (FDOT), Federal Highway Administration (FHWA), and American Association of State Highway Transportation Officials (AASHTO) for deep foundation design is to use a constant load and resistanc...

Performance based design of laterally loaded drilled shafts.

DOT National Transportation Integrated Search

2013-12-01

Reliability-based design of deep foundations such as drilled shafts has been increasingly important due to the : heightened awareness of the importance of risk management. The load and resistance factor design has been : implemented by FHWA since 200...

Understanding hydrothermal circulation patterns at a low-enthalpy thermal spring using audio-magnetotelluric data: A case study from Ireland

NASA Astrophysics Data System (ADS)

Blake, Sarah; Henry, Tiernan; Muller, Mark R.; Jones, Alan G.; Moore, John Paul; Murray, John; Campanyà, Joan; Vozar, Jan; Walsh, John; Rath, Volker

2016-09-01

Kilbrook spring is a thermal spring in east-central Ireland. The temperatures in the spring are the highest recorded for any thermal spring in Ireland (maximum of 25 °C). The temperature is elevated with respect to average Irish groundwater temperatures (9.5-10.5 °C), and represents a geothermal energy potential, which is currently under evaluation. A multi-disciplinary investigation based upon an audio-magnetotelluric (AMT) survey, and hydrochemical analysis including time-lapse temperature and chemistry measurements, has been undertaken with the aims of investigating the provenance of the thermal groundwater and characterising the geological structures facilitating groundwater circulation in the bedrock. The three-dimensional (3-D) electrical resistivity model of the subsurface at Kilbrook spring was obtained by the inversion of AMT impedances and vertical magnetic transfer functions. The model is interpreted alongside high resolution temperature and electrical conductivity measurements, and a previous hydrochemical analysis. The hydrochemical analysis and time-lapse measurements suggest that the thermal waters have a relatively stable temperature and major ion hydrochemistry, and flow within the limestones of the Carboniferous Dublin Basin at all times. The 3-D resistivity model of the subsurface reveals a prominent NNW aligned structure within a highly resistive limestone lithology that is interpreted as a dissolutionally enhanced strike-slip fault, of Cenozoic age. The karstification of this structure, which extends to depths of at least 500 m directly beneath the spring, has provided conduits that facilitate the operation of a relatively deep hydrothermal circulation pattern (likely estimated depths between 560 and 1000 m) within the limestone succession of the Dublin Basin. The results of this study support the hypothesis that the winter thermal maximum and simultaneous increased discharge at Kilbrook spring is the result of rapid infiltration, heating and re-circulation of meteoric waters within this structurally controlled hydrothermal circulation system. This paper illustrates how AMT may be useful in a multi-disciplinary investigation of an intermediate-depth (100-1000 m), low-enthalpy, geothermal target, and shows how the different strands of inquiry from a multi-disciplinary investigation may be woven together to gain a deeper understanding of a complex hydrothermal system.

Deep resistivity structure of Yucca Flat, Nevada Test Site, Nevada

USGS Publications Warehouse

Asch, Theodore H.; Rodriguez, Brian D.; Sampson, Jay A.; Wallin, Erin L.; Williams, Jackie M.

2006-01-01

The Department of Energy (DOE) and the National Nuclear Security Administration (NNSA) at their Nevada Site Office are addressing groundwater contamination resulting from historical underground nuclear testing through the Environmental Management program and, in particular, the Underground Test Area project. One issue of concern is the nature of the somewhat poorly constrained pre Tertiary geology and its effects on ground-water flow in the area adjacent to a nuclear test. Ground water modelers would like to know more about the hydrostratigraphy and geologic structure to support a hydrostratigraphic framework model that is under development for the Yucca Flat Corrective Action Unit (CAU). During 2003, the U.S. Geological Survey, supported by the DOE and NNSA-NSO, collected and processed data from 51 magnetotelluric (MT) and audio-magnetotelluric (AMT) stations at the Nevada Test Site in and near Yucca Flat to assist in characterizing the pre-Tertiary geology in that area. The primary purpose was to refine the character, thickness, and lateral extent of pre Tertiary confining units. In particular, a major goal has been to define the upper clastic confining unit (late Devonian - Mississippian-age siliciclastic rocks assigned to the Eleana Formation and Chainman Shale) in the Yucca Flat area. The MT and AMT data have been released in separate USGS Open File Reports. The Nevada Test Site magnetotelluric data interpretation presented in this report includes the results of detailed two-dimensional (2 D) resistivity modeling for each profile (including alternative interpretations) and gross inferences on the three dimensional (3 D) character of the geology beneath each station. The character, thickness, and lateral extent of the Chainman Shale and Eleana Formation that comprise the Upper Clastic Confining Unit are generally well determined in the upper 5 km. Inferences can be made regarding the presence of the Lower Clastic Confining Unit at depths below 5 km. Large fault structures such as the CP Thrust fault, the Carpetbag fault, and the Yucca fault that cross Yucca Flat are also discernable as are other smaller faults. The subsurface electrical resistivity distribution and inferred geologic structures determined by this investigation should help constrain the hydrostratigraphic framework model that is under development.

Very Fast Current Diagnostic for Linear Pulsed Beams

NASA Astrophysics Data System (ADS)

Nassisi, Vincenzo; Delle Side, Domenico; Turco, Vito

2018-01-01

Fast current pulses manage lasers and particle accelerators and require sophisticate systems to be detected. At today Rogowski coils are well known. They are designed and built with a toroidal structure. In recently application, flat transmission lines are imploded and for this reason we develop a linear Rogowski coil to detect current pulses inside flat conductors. To get deep information from the system, it was approached by means of the theory of the transmission lines. The coil we build presents a resistance but it doesn't influence the rise time of the response, instead the integrating time. We also studied the influence of the magnetic properties of coil support. The new device was able to record pulses of more hundred nanoseconds depending on the inductance, load impedance and resistance of the coil. Furthermore, its response was characterized by a sub-nanosecond rise time ( 100 ps), The attenuation coefficient depends mainly on the turn number of the coil, while the quality of the response depends both on the manufacture quality of the coil and on the magnetic core characteristics. In biophysical applications often, a double line is employed in order to have a sample as control and a sample stressed by a light source. So, in this case we build two equal plane lines by 100 Ω characteristic resistance connected in parallel. We diagnosed the current present in a line. The attenuation factor resulted to be 11,5 A/V.

Highly Transparent, Nanofiller-Reinforced Scratch-Resistant Polymeric Composite Films Capable of Healing Scratches.

PubMed

Li, Yang; Chen, Shanshan; Li, Xiang; Wu, Mengchun; Sun, Junqi

2015-10-27

Integration of healability and mechanical robustness is challenging in the fabrication of highly transparent films for applications as protectors in optical and displaying devices. Here we report the fabrication of healable, highly transparent and scratch-resistant polymeric composite films that can conveniently and repeatedly heal severe damage such as cuts of several tens of micrometers wide and deep. The film fabrication process involves layer-by-layer (LbL) assembly of a poly(acrylic acid) (PAA) blend and branched poly(ethylenimine) (bPEI) blend, where each blend contains the same polyelectrolytes of low and high molecular weights, followed by annealing the resulting PAA/bPEI films with aqueous salt solution and incorporation of CaCO3 nanoparticles as nanofillers. The rearrangement of low-molecular-weight PAA and bPEI under aqueous salt annealing plays a critical role in eliminating film defects to produce optically highly transparent polyelectrolyte films. The in situ formation of tiny and well-dispersed CaCO3 nanoparticles gives the resulting composite films enhanced scratch-resistance and also retains the healing ability of the PAA/bPEI matrix films. The reversibility of noncovalent interactions among the PAA, bPEI, and CaCO3 nanoparticles and the facilitated migration of PAA and bPEI triggered by water enable healing of the structural damage and restoration of optical transparency of the PAA/bPEI films reinforced with CaCO3 nanoparticles.

Broad Learning System: An Effective and Efficient Incremental Learning System Without the Need for Deep Architecture.

PubMed

Chen, C L Philip; Liu, Zhulin

2018-01-01

Broad Learning System (BLS) that aims to offer an alternative way of learning in deep structure is proposed in this paper. Deep structure and learning suffer from a time-consuming training process because of a large number of connecting parameters in filters and layers. Moreover, it encounters a complete retraining process if the structure is not sufficient to model the system. The BLS is established in the form of a flat network, where the original inputs are transferred and placed as "mapped features" in feature nodes and the structure is expanded in wide sense in the "enhancement nodes." The incremental learning algorithms are developed for fast remodeling in broad expansion without a retraining process if the network deems to be expanded. Two incremental learning algorithms are given for both the increment of the feature nodes (or filters in deep structure) and the increment of the enhancement nodes. The designed model and algorithms are very versatile for selecting a model rapidly. In addition, another incremental learning is developed for a system that has been modeled encounters a new incoming input. Specifically, the system can be remodeled in an incremental way without the entire retraining from the beginning. Satisfactory result for model reduction using singular value decomposition is conducted to simplify the final structure. Compared with existing deep neural networks, experimental results on the Modified National Institute of Standards and Technology database and NYU NORB object recognition dataset benchmark data demonstrate the effectiveness of the proposed BLS.

[Effects of short-term deep vertically rotary tillage on topsoil structure of lime concretion black soil and wheat growth in Huang-Huai-Hai Plain, China].

PubMed

Zhai, Zhen; Li, Yu Yi; Zhang, Li; Pang, Bo; Pang, Huan Cheng; Wei, Ben Hui; Wang, Qing Wei; Qi, Shao Wei

2017-04-18

Annual rotary tillage can often create a compacted plough pan and shallow arable layer which hampers the high crop yield in Huang-Huai-Hai region. A brand new farming method named Vertically Rotary Tillage was introduced to solve this problem. One short-term field experiment was conducted to explore the effect of deep vertically rotary tillage on soil physical properties and photosynthetic characteristics at flowering stage of winter wheat. Two tillage treatments were designed including subsoiling tillage with 20 cm depth (SS 20 , CK) and deep vertically rotary tillage with 30 cm depth (DVR 30 ). The result showed that compared with SS 20 treatment, DVR 30 treatment could thoroughly break the plow pan and loose the arable layer. The soil bulk density at 10-20 cm and 20-30 cm layers under DVR 30 treatment was decreased by 9.5% and 11.2% respectively than that under SS 20 treatment. Meanwhile, the penetration resistance at 20-30 cm layer under DVR 30 treatment was also decreased by 42.3% than that under SS 20 treatment. Moreover, water infiltration under DVR 30 treatment and the soil water storage in the deep soil layers was then increased. The mass water content of soil increased significantly with the increase of soil depth. There was significant difference of mass water content of 30-40 cm 40-50 cm between SS 20 and DVR 30 . The mass water content 30-40 cm and 40-50 cm layers under DVR 30 treatment was increased by 16.9% and 10.6% compared with SS 20 treatment, respectively. Furthermore, DVR 30 treatment promoted the improvement of the photosynthetic capacity of wheat which could contribute to the dry matter accumulation of winter wheat. The net photosynthesis rate and SPAD at flowering stage of winter wheat leaves under DVR 30 treatment were increased by 1.3% and 15.5% respectively than that under SS 20 treatment, thereby the above and underground dry matter accumulation of winter wheat under DVR 30 was increased significantly. Due to all the superiority of DVR 30 treatment over SS 20 treatment showed above, the winter wheat yield under DVR 30 treatment was increased by 12.4% than that under SS 20 . It was concluded that deep vertically rotary tillage could provide a new and effective way to break up the compacted plough pan, build a reasonable soil structure and increase crop yield.

Population-Based Survey of Filamentous Fungi and Antifungal Resistance in Spain (FILPOP Study)

PubMed Central

Mellado, E.; Peláez, T.; Pemán, J.; Zapico, S.; Alvarez, M.; Rodríguez-Tudela, J. L.; Cuenca-Estrella, M.

2013-01-01

A population-based survey was conducted to investigate the epidemiology of and antifungal resistance in Spanish clinical strains of filamentous fungi isolated from deep tissue samples, blood cultures, and respiratory samples. The study was conducted in two different periods (October 2010 and May 2011) to analyze seasonal variations. A total of 325 strains were isolated in 29 different hospitals. The average prevalence was 0.0016/1,000 inhabitants. Strains were identified by sequencing of DNA targets and susceptibility testing by the European Committee for Antimicrobial Susceptibility Testing reference procedure. The most frequently isolated genus was Aspergillus, accounting for 86.3% of the isolates, followed by Scedosporium at 4.7%; the order Mucorales at 2.5%; Penicillium at 2.2%, and Fusarium at 1.2%. The most frequent species was Aspergillus fumigatus (48.5%), followed by A. flavus (8.4%), A. terreus (8.1%), A. tubingensis (6.8%), and A. niger (6.5%). Cryptic/sibling Aspergillus species accounted for 12% of the cases. Resistance to amphotericin B was found in 10.8% of the isolates tested, while extended-spectrum triazole resistance ranged from 10 to 12.7%, depending on the azole tested. Antifungal resistance was more common among emerging species such as those of Scedosporium and Mucorales and also among cryptic species of Aspergillus, with 40% of these isolates showing resistance to all of the antifungal compounds tested. Cryptic Aspergillus species seem to be underestimated, and their correct classification could be clinically relevant. The performance of antifungal susceptibility testing of the strains implicated in deep infections and multicentric studies is recommended to evaluate the incidence of these cryptic species in other geographic areas. PMID:23669377

Metagenomic profiles of antibiotic resistance genes (ARGs) between human impacted estuary and deep ocean sediments.

PubMed

Chen, Baowei; Yang, Ying; Liang, Ximei; Yu, Ke; Zhang, Tong; Li, Xiangdong

2013-11-19

Knowledge of the origins and dissemination of antibiotic resistance genes (ARGs) is essential for understanding modern resistomes in the environment. The mechanisms of the dissemination of ARGs can be revealed through comparative studies on the metagenomic profiling of ARGs between relatively pristine and human-impacted environments. The deep ocean bed of the South China Sea (SCS) is considered to be largely devoid of anthropogenic impacts, while the Pearl River Estuary (PRE) in south China has been highly impacted by intensive human activities. Commonly used antibiotics (sulfamethazine, norfloxacin, ofloxacin, tetracycline, and erythromycin) have been detected through chemical analysis in the PRE sediments, but not in the SCS sediments. In the relatively pristine SCS sediments, the most prevalent and abundant ARGs are those related to resistance to macrolides and polypeptides, with efflux pumps as the predominant mechanism. In the contaminated PRE sediments, the typical ARG profiles suggest a prevailing resistance to antibiotics commonly used in human health and animal farming (including sulfonamides, fluoroquinolones, and aminoglycosides), and higher diversity in both genotype and resistance mechanism than those in the SCS. In particular, antibiotic inactivation significantly contributed to the resistance to aminoglycosides, β-lactams, and macrolides observed in the PRE sediments. There was a significant correlation in the levels of abundance of ARGs and those of mobile genetic elements (including integrons and plasmids), which serve as carriers in the dissemination of ARGs in the aquatic environment. The metagenomic results from the current study support the view that ARGs naturally originate in pristine environments, while human activities accelerate the dissemination of ARGs so that microbes would be able to tolerate selective environmental stress in response to anthropogenic impacts.

Impact of the HIV-1 genetic background and HIV-1 population size on the evolution of raltegravir resistance.

PubMed

Fun, Axel; Leitner, Thomas; Vandekerckhove, Linos; Däumer, Martin; Thielen, Alexander; Buchholz, Bernd; Hoepelman, Andy I M; Gisolf, Elizabeth H; Schipper, Pauline J; Wensing, Annemarie M J; Nijhuis, Monique

2018-01-05

Emergence of resistance against integrase inhibitor raltegravir in human immunodeficiency virus type 1 (HIV-1) patients is generally associated with selection of one of three signature mutations: Y143C/R, Q148K/H/R or N155H, representing three distinct resistance pathways. The mechanisms that drive selection of a specific pathway are still poorly understood. We investigated the impact of the HIV-1 genetic background and population dynamics on the emergence of raltegravir resistance. Using deep sequencing we analyzed the integrase coding sequence (CDS) in longitudinal samples from five patients who initiated raltegravir plus optimized background therapy at viral loads > 5000 copies/ml. To investigate the role of the HIV-1 genetic background we created recombinant viruses containing the viral integrase coding region from pre-raltegravir samples from two patients in whom raltegravir resistance developed through different pathways. The in vitro selections performed with these recombinant viruses were designed to mimic natural population bottlenecks. Deep sequencing analysis of the viral integrase CDS revealed that the virological response to raltegravir containing therapy inversely correlated with the relative amount of unique sequence variants that emerged suggesting diversifying selection during drug pressure. In 4/5 patients multiple signature mutations representing different resistance pathways were observed. Interestingly, the resistant population can consist of a single resistant variant that completely dominates the population but also of multiple variants from different resistance pathways that coexist in the viral population. We also found evidence for increased diversification after stronger bottlenecks. In vitro selections with low viral titers, mimicking population bottlenecks, revealed that both recombinant viruses and HXB2 reference virus were able to select mutations from different resistance pathways, although typically only one resistance pathway emerged in each individual culture. The generation of a specific raltegravir resistant variant is not predisposed in the genetic background of the viral integrase CDS. Typically, in the early phases of therapy failure the sequence space is explored and multiple resistance pathways emerge and then compete for dominance which frequently results in a switch of the dominant population over time towards the fittest variant or even multiple variants of similar fitness that can coexist in the viral population.

Detecting metastable olivine wedge beneath Japan Sea with deep earthquake coda wave interferometry

NASA Astrophysics Data System (ADS)

Shen, Z.; Zhan, Z.

2017-12-01

It has been hypothesized for decades that the lower-pressure olivine phase would kinetically persist in the interior of slab into the transition zone, forming a low-velocity "Metastable Olivine Wedge" (MOW). MOW, if exists, would play a critical role in generating deep earthquakes and parachuting subducted slabs with its buoyancy. However, seismic evidences for MOW are still controversial, and it is suggested that MOW can only be detected using broadband waveforms given the wavefront healing effects for travel times. On the other hand, broadband waveforms are often complicated by shallow heterogeneities. Here we propose a new method using the source-side interferometry of deep earthquake coda to detect MOW. In this method, deep earthquakes are turned into virtual sensors with the reciprocity theorem, and the transient strain from one earthquake to the other is estimated by cross-correlating the coda from the deep earthquake pair at the same stations. This approach effectively isolates near-source structure from complicated shallow structures, hence provide finer resolution to deep slab structures. We apply this method to Japan subduction zone with Hi-Net data, and our preliminary result does not support a large MOW model (100km thick at 410km) as suggested by several previous studies. Metastable olivine at small scales or distributed in an incoherent manner in deep slabs may still be possible.

Soil moisture depletion under simulated drought in the Amazon: impacts on deep root uptake.

PubMed

Markewitz, Daniel; Devine, Scott; Davidson, Eric A; Brando, Paulo; Nepstad, Daniel C

2010-08-01

*Deep root water uptake in tropical Amazonian forests has been a major discovery during the last 15 yr. However, the effects of extended droughts, which may increase with climate change, on deep soil moisture utilization remain uncertain. *The current study utilized a 1999-2005 record of volumetric water content (VWC) under a throughfall exclusion experiment to calibrate a one-dimensional model of the hydrologic system to estimate VWC, and to quantify the rate of root uptake through 11.5 m of soil. *Simulations with root uptake compensation had a relative root mean square error (RRMSE) of 11% at 0-40 cm and < 5% at 350-1150 cm. The simulated contribution of deep root uptake under the control was c. 20% of water demand from 250 to 550 cm and c. 10% from 550 to 1150 cm. Furthermore, in years 2 (2001) and 3 (2002) of throughfall exclusion, deep root uptake increased as soil moisture was available but then declined to near zero in deep layers in 2003 and 2004. *Deep root uptake was limited despite high VWC (i.e. > 0.30 cm(3) cm(-3)). This limitation may partly be attributable to high residual water contents (theta(r)) in these high-clay (70-90%) soils or due to high soil-to-root resistance. The ability of deep roots and soils to contribute increasing amounts of water with extended drought will be limited.

Deep Crustal Structure beneath Large Igneous Provinces and the Petrologic Evolution of Flood Basalts

NASA Astrophysics Data System (ADS)

Richards, Mark; Ridley, Victoria

2010-05-01

We present a review of seismological constraints on deep crustal structures underlying large igneous provinces (LIPs), largely from wide-angle seismic refraction surveys. The main purpose of this review is to ascertain whether this seismic evidence is consistent with, or contrary to, petrological models for the genesis of flood basalt lavas. Where high-quality data are available beneath continental flood basalt (CFB) provinces (Emeishan, Columbia River, Deccan, Siberia), high-velocity structures (Vp ~6.9-7.5 km/sec) are typically found immediately overlying the Moho in layers of order ~5-15 km thick. Oceanic plateau (OP) LIPs exhibit similar layers, with a conspicuous layer of very high crustal velocity (Vp~7.7 km/sec) beneath the enormous Ontong-Java plateau. These structures are similar to inferred ultramafic underplating structures seen beneath active hotspots such as Hawaii, the Marqueses, and La Reunion. Petrogenetic models for flood basalt volcanism based on hot plume melting beneath mature lithosphere suggest that these deep seismic structures may consist in large part of cumulate bodies of olivine and clinopyroxene which result from ponding and deep-crustal fractionation of ultramafic primary melts. Such fractionation is necessary to produce basalts with typical MgO contents of ~6-8%, as observed for the vast bulk of observed flood basalts, from primary melts with MgO contents of order ~15-18% (or greater) such as result from hot, deep melting beneath the lithosphere. The volumes of cumulate bodies and ultramafic intrusions in the lowermost crust, often described in the literature as "underplating," are comparable to those of the overlying basaltic formations, also consistent with petrological models. Further definition of the deep seismic structure beneath such prominent LIPs as the Ontong-Java Plateau could place better constraints on flood basalt petrogenesis by determining the relative volumes of ultramafic bodies and basaltic lavas, thereby better constraining the overall process of LIP emplacement.

Deep crustal structure beneath large igneous provinces and the petrologic evolution of flood basalts

NASA Astrophysics Data System (ADS)

Ridley, Victoria A.; Richards, Mark A.

2010-09-01

We present a review of seismological constraints on deep crustal structures underlying large igneous provinces (LIPs), largely from wide-angle seismic refraction surveys. The main purpose of this review is to ascertain whether this seismic evidence is consistent with, or contrary to, petrological models for the genesis of flood basalt lavas. Where high-quality data are available beneath continental flood basalt (CFB) provinces (Emeishan, Columbia River, Deccan, Siberia), high-velocity structures (Vp ˜ 6.9-7.5 km/sec) are typically found immediately overlying the Moho in layers of order ˜5-15 km thick. Oceanic plateau (OP) LIPs exhibit similar layers, with a conspicuous layer of very high crustal velocity (Vp ˜ 7.7 km/sec) beneath the enormous Ontong-Java plateau. These structures are similar to inferred ultramafic underplating structures seen beneath active hot spots such as Hawaii, the Marquesas, and La Reunion. Petrogenetic models for flood basalt volcanism based on hot plume melting beneath mature lithosphere suggest that these deep seismic structures may consist in large part of cumulate bodies of olivine and clinopyroxene which result from ponding and deep-crustal fractionation of ultramafic primary melts. Such fractionation is necessary to produce basalts with typical MgO contents of ˜6-8%, as observed for the vast bulk of observed flood basalts, from primary melts with MgO contents of order ˜15-18% (or greater) such as result from hot, deep melting beneath the lithosphere. The volumes of cumulate bodies and ultramafic intrusions in the lowermost crust, often described in the literature as "underplating," are comparable to those of the overlying basaltic formations, also consistent with petrological models. Further definition of the deep seismic structure beneath such prominent LIPs as the Ontong-Java Plateau could place better constraints on flood basalt petrogenesis by determining the relative volumes of ultramafic bodies and basaltic lavas, thereby better constraining the overall process of LIP emplacement.

Deep Crustal Structure beneath Large Igneous Provinces and the Petrologic Evolution of Flood Basalts

NASA Astrophysics Data System (ADS)

Richards, M. A.; Ridley, V. A.

2010-12-01

We present a review of seismological constraints on deep crustal structures underlying large igneous provinces (LIPs), largely from wide-angle seismic refraction surveys. The main purpose of this review is to ascertain whether this seismic evidence is consistent with, or contrary to, petrological models for the genesis of flood basalt lavas. Where high-quality data are available beneath continental flood basalt (CFB) provinces (Emeishan, Columbia River, Deccan, Siberia), high-velocity structures (Vp ~6.9-7.5 km/sec) are typically found immediately overlying the Moho in layers of order ~5-15 km thick. Oceanic plateau (OP) LIPs exhibit similar layers, with a conspicuous layer of very high crustal velocity (Vp~7.7 km/sec) beneath the enormous Ontong-Java plateau. These structures are similar to inferred ultramafic underplating structures seen beneath active hotspots such as Hawaii, the Marquesas, and La Reunion. Petrogenetic models for flood basalt volcanism based on hot plume melting beneath mature lithosphere suggest that these deep seismic structures may consist in large part of cumulate bodies of olivine and clinopyroxene which result from ponding and deep-crustal fractionation of ultramafic primary melts. Such fractionation is necessary to produce basalts with typical MgO contents of ~6-8%, as observed for the vast bulk of observed flood basalts, from primary melts with MgO contents of order ~15-18% (or greater) such as result from hot, deep melting beneath the lithosphere. The volumes of cumulate bodies and ultramafic intrusions in the lowermost crust, often described in the literature as “underplating,” are comparable to those of the overlying basaltic formations, also consistent with petrological models. Further definition of the deep seismic structure beneath such prominent LIPs as the Ontong-Java Plateau could place better constraints on flood basalt petrogenesis by determining the relative volumes of ultramafic bodies and basaltic lavas, thereby better constraining the overall process of LIP emplacement.

Space Suit Technologies Protect Deep-Sea Divers

NASA Technical Reports Server (NTRS)

2008-01-01

Working on NASA missions allows engineers and scientists to hone their skills. Creating devices for the high-stress rigors of space travel pushes designers to their limits, and the results often far exceed the original concepts. The technologies developed for the extreme environment of space are often applicable here on Earth. Some of these NASA technologies, for example, have been applied to the breathing apparatuses worn by firefighters, the fire-resistant suits worn by racecar crews, and, most recently, the deep-sea gear worn by U.S. Navy divers.

Shallow subsurface imaging of the Piano di Pezza active normal fault (central Italy) by high-resolution refraction and electrical resistivity tomography coupled with time domain electromagnetic data

NASA Astrophysics Data System (ADS)

Villani, Fabio; Tulliani, Valerio; Fierro, Elisa; Sapia, Vincenzo; Civico, Riccardo

2015-04-01

The Piano di Pezza fault is the north-westernmost segment of the >20 km long Ovindoli-Pezza active normal fault-system (central Italy). Although existing paleoseismic data document high vertical Holocene slip rates (~1 mm/yr) and a remarkable seismogenic potential of this fault, its subsurface setting and Pleistocene cumulative displacement are still poorly known. We investigated for the first time by means of high-resolution seismic and electrical resistivity tomography coupled with time domain electromagnetic (TDEM) measurements the shallow subsurface of a key section of the Piano di Pezza fault. Our surveys cross a ~5 m-high fault scarp that was generated by repeated surface-rupturing earthquakes displacing some Late Holocene alluvial fans. We provide 2-D Vp and resistivity images which clearly show significant details of the fault structure and the geometry of the shallow basin infill material down to 50 m depth. We can estimate the dip (~50°) and the Holocene vertical displacement of the master fault (~10 m). We also recognize in the hangingwall some low-velocity/low-resistivity regions that we relate to packages of colluvial wedges derived from scarp degradation, which may represent the record of several paleo-earthquakes older than the Late Holocene events previously recognized by paleoseismic trenching. Conversely, due to the limited investigation depth of seismic and electrical tomography, the estimation of the cumulative amount of Pleistocene throw is hampered. Therefore, to increase the depth of investigation, we performed 7 TDEM measurements along the electrical profile using a 50 m loop size both in central and offset configuration. The recovered 1-D resistivity models show a good match with 2-D resistivity images in the near surface. Moreover, TDEM inversion results indicate that in the hangingwall, ~200 m away from the surface fault trace, the carbonate pre-Quaternary basement may be found at ~90-100 m depth. The combined approach of electrical and seismic data coupled with TDEM measurements provides a robust constraint to the Piano di Pezza fault cumulative offset. Our data are useful for better reconstructing the deep structural setting of the Piano di Pezza basin and assessing the role played by extensional tectonics in its Quaternary evolution.

Cell and defect behavior in lithium-counterdoped solar cells

NASA Technical Reports Server (NTRS)

Weinberg, I.; Mehta, S.; Swartz, C. K.

1984-01-01

Some n(+)/p cells in which lithium is introduced as a counterdopant, by ion-implantation, into the cell's boron-doped p-region were studied. To determine if the cells radiation resistance could be significantly improved by lithium counterdoping. Defect behavior was related to cell performance using deep level transient spectroscopy. Results indicate a significantly increased radiation resistance for the lithium counterdoped cells when compared to the boron doped 1 ohm-cm control cell. The increased radiation resistance of the lithium counterdoped cells is due to the complexing of lithium with divacancies and boron. It is speculated that complexing with oxygen and single vacancies also contributes to the increased radiation resistance. Counterdoping silicon with lithium results in a different set of defects.

PATHOPHYSIOLOGICAN AND CLINICAL ASSESSMENT OF CHANGES OF ERYTHROCYTE RESISTANCE TO SAPONIN IN THE PROCESS OF ROENTGEN THERAPY (in Russian)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Krylov, A.A.

1961-04-01

In 40 patients undergoing roentgen therapy dynamic studies were made concerning the resistance of erythrocytes to saponin. A method of kinelysis was employed with a Soviet photoelectric colorimeter FEK-M. In the majority of patients subject to deep roentgen therapy there was noted a considerable rise of erythrocyte resistance to saponin, which is considered as a manifestation of compensatory mechanisms. A rapid decline of the resistance ("saponin disruption'') was preceded, as a ruls, by radiation toxemia and served as a signal of the necessity of repeated blood transfusions. The technique referred to is recommended as an objective index of the statemore » of regulatory mechanisms in the process of irradiation. (auth)« less

Ceramic Borehole Seals for Nuclear Waste Disposal Applications

NASA Astrophysics Data System (ADS)

Lowry, B.; Coates, K.; Wohletz, K.; Dunn, S.; Patera, E.; Duguid, A.; Arnold, B.; Zyvoloski, G.; Groven, L.; Kuramyssova, K.

2015-12-01

Sealing plugs are critical features of the deep borehole system design. They serve as structural platforms to bear the weight of the backfill column, and as seals through their low fluid permeability and bond to the borehole or casing wall. High hydrostatic and lithostatic pressures, high mineral content water, and elevated temperature due to the waste packages and geothermal gradient challenge the long term performance of seal materials. Deep borehole nuclear waste disposal faces the added requirement of assuring performance for thousands of years in large boreholes, requiring very long term chemical and physical stability. A high performance plug system is being developed which capitalizes on the energy of solid phase reactions to form a ceramic plug in-situ. Thermites are a family of self-oxidized metal/oxide reactions with very high energy content and the ability to react under water. When combined with engineered additives the product exhibits attractive structural, sealing, and corrosion properties. In the initial phase of this research, exploratory and scaled tests demonstrated formulations that achieved controlled, fine grained, homogeneous, net shape plugs composed predominantly of ceramic material. Laboratory experiments produced plug cores with confined fluid permeability as low as 100 mDarcy, compressive strength as high as 70 MPa (three times the strength of conventional well cement), with the inherent corrosion resistance and service temperature of ceramic matrices. Numerical thermal and thermal/structural analyses predicted the in-situ thermal performance of the reacted plugs, showing that they cooled to ambient temperature (and design strength) within 24 to 48 hours. The current development effort is refining the reactant formulations to achieve desired performance characteristics, developing the system design and emplacement processes to be compatible with conventional well service practices, and understanding the thermal, fluid, and structural effects the plug will have on surrounding media. This paper will report on the state of the development effort and plans for a field demonstration in early 2016 in a cased well with traditional plug seal and strength measurements.

Wear resistance of thick diamond like carbon coatings against polymeric materials used in single screw plasticizing technology

NASA Astrophysics Data System (ADS)

Zitzenbacher, G.; Liu, K.; Forsich, C.; Heim, D.

2015-05-01

Wear on the screw and barrel surface accompany polymer single screw plasticizing technology from the beginning. In general, wear on screws can be reduced by using nitrided steel surfaces, fused armour alloys on the screw flights and coatings. However, DLC-coatings (Diamond Like Carbon) comprise a number of interesting properties such as a high hardness, a low coefficient of friction and an excellent corrosion resistance due to their amorphous structure. The wear resistance of about 50 µm thick DLC-coatings against polyamide 6.6, polybutylene terephthalate and polypropylene is investigated in this paper. The tribology in the solids conveying zone of a single screw extruder until the beginning of melting is evaluated using a pin on disc tribometer and a so called screw tribometer. The polymeric pins are pressed against coated metal samples using the pin on disc tribometer and the tests are carried out at a defined normal force and sliding velocity. The screw tribometer is used to perform tribological experiments between polymer pellets and rotating coated metal shafts simulating the extruder screw. Long term experiments were performed to evaluate the wear resistance of the DLC-coating. A reduction of the coefficient of friction can be observed after a frictional distance of about 20 kilometers using glass fibre reinforced polymeric materials. This reduction is independent on the polymer and accompanied by a black layer on the wear surface of the polymeric pins. The DLC-coated metal samples show an up to 16 µm deep wear track after the 100 kilometer test period against the glass fiber filled materials only.

Electronic structure properties of deep defects in hBN

NASA Astrophysics Data System (ADS)

Dev, Pratibha; Prdm Collaboration

In recent years, the search for room-temperature solid-state qubit (quantum bit) candidates has revived interest in the study of deep-defect centers in semiconductors. The charged NV-center in diamond is the best known amongst these defects. However, as a host material, diamond poses several challenges and so, increasingly, there is an interest in exploring deep defects in alternative semiconductors such as hBN. The layered structure of hBN makes it a scalable platform for quantum applications, as there is a greater potential for controlling the location of the deep defect in the 2D-matrix through careful experiments. Using density functional theory-based methods, we have studied the electronic and structural properties of several deep defects in hBN. Native defects within hBN layers are shown to have high spin ground states that should survive even at room temperature, making them interesting solid-state qubit candidates in a 2D matrix. Partnership for Reduced Dimensional Material (PRDM) is part of the NSF sponsored Partnerships for Research and Education in Materials (PREM).

A numerical analysis of transient planetary waves and the vertical structure in a meso-strato-troposphere model, part 1.4A

NASA Technical Reports Server (NTRS)

Zhang, K. S.; Sasamori, T.

1984-01-01

The structure of unstable planetary waves is computed by a quasi-geostrophic model extending from the surface up to 80 km by means of eigenvalue-eigenfunction techniques in spherical coordinates. Three kinds of unstable modes of distinct phase speeds and vertical structures are identified in the winter climate state: (1) the deep Green mode with its maximum amplitude in the stratosphere; (2) the deep Charney mode with its maximum amplitude in the troposphere: and (3) the shallow Charney mode which is largely confined to the troposphere. Both the Green mode and the deep Charney mode are characterized by very slow phase speeds. They are mainly supported by upward wave energy fluxes, but the local baroclinic energy conversion within the stratosphere also contributes in supporting these deep modes. The mesosphere and the troposphere are dynamically independent in the summer season decoupled by the deep stratospheric easterly. The summer mesosphere supports the easterly unstable waves 1-4. Waves 3 and 4 are identified with the observed mesospheric 2-day wave and 1.7-day wave, respectively.

Processing-Induced Electrically Active Defects in Black Silicon Nanowire Devices.

PubMed

Carapezzi, Stefania; Castaldini, Antonio; Mancarella, Fulvio; Poggi, Antonella; Cavallini, Anna

2016-04-27

Silicon nanowires (Si NWs) are widely investigated nowadays for implementation in advanced energy conversion and storage devices, as well as many other possible applications. Black silicon (BSi)-NWs are dry etched NWs that merge the advantages related to low-dimensionality with the special industrial appeal connected to deep reactive ion etching (RIE). In fact, RIE is a well established technique in microelectronics manufacturing. However, RIE processing could affect the electrical properties of BSi-NWs by introducing deep states into their forbidden gap. This work applies deep level transient spectroscopy (DLTS) to identify electrically active deep levels and the associated defects in dry etched Si NW arrays. Besides, the successful fitting of DLTS spectra of BSi-NWs-based Schottky barrier diodes is an experimental confirmation that the same theoretical framework of dynamic electronic behavior of deep levels applies in bulk as well as in low dimensional structures like NWs, when quantum confinement conditions do not occur. This has been validated for deep levels associated with simple pointlike defects as well as for deep levels associated with defects with richer structures, whose dynamic electronic behavior implies a more complex picture.

High Resolution Magnetotelluric Imaging of the Nisyros Caldera and Geothermal Resource (Greece)

NASA Astrophysics Data System (ADS)

Tzanis, Andreas; Sakkas, Vassilis; Lagios, Evangelos

2017-04-01

This work reports the qualitative and quantitative re-examination of legacy magnetotelluric soundings data obtained in the caldera of Nisyros, a small island volcano at the eastern end of the Hellenic Volcanic Arc (HVA), Greece, in an attempt to explore the high temperature geothermal resource of the area. The data set comprises 39 single-site soundings and is re-examined with improved data processing methods, new hypothetical event analysis techniques to study the spatial configuration of the telluric field and two-dimensional inversion tools. Iteratively reweighted least squares have been implemented to compute stable and smooth Earth response functions, which were found to exhibit 2-D to weakly 3-D attributes as a result of induction in low-contrast local geoelectric inhomogeneities, superimposed on a dominantly 2-D background structure. The transfer functions appear to be free of coastal and island induction effects due to the low offshore/onshore resistivity contrast at, and below sea level. The spatial properties of the telluric field are studied with hypothetical event analysis based on 3-D decompositions of the impedance tensor [1]. The results indicate that convection and hydrothermal circulation is controlled by a system of antithetic NE-SW oriented active normal faults which form a graben-like structure and define the 2-D background, as well as a conjugate system of NNW-SSE normal faults which is particularly active at the SW quadrant of the island and define the main convection path. It was determined that under these conditions the data can be interpreted with 2-D inversion, which was carried out with [2]. The inversion has successfully reconstructed detailed images of the structural and functional elements of the hydrothermal system. The structural elements include a number of shallow hot water reservoirs in the argillic and phyllic alteration zones and a laterally extended deep (approx. 1km) circulation zone, all embedded in a low-resistivity matrix with very low lateral contrasts. The functional elements include images of the most important convection conduits created by the intersection of major fault planes. The results are corroborated by the logs of two deep exploration wells. Overall, on the basis of a carefully reworked data set, our analysis has provided detailed images of the volcano's interior and valuable insight into its structure, function and geothermal potential. References [1] Tzanis, A., 2014. The Characteristic States of the Magnetotelluric Impedance Tensor: Construction, analytic properties and utility in the analysis of general Earth conductivity distributions, arXiv:1404.1478 [physics.geo-ph]; last accessed, January 2017. [2] Rodi, W. and Mackie, R.L., 2001. Nonlinear conjugate gradients algorithm for 2-D magnetotelluric inversion, Geophysics, 66 (1), 174-187.

Antimicrobial potential and taxonomic investigation of piezotolerant Streptomyces sp. NIOT-Ch-40 isolated from deep-sea sediment.

PubMed

Padmanaban, Vishnu Priya; Verma, Pankaj; Venkatabaskaran, Srividhyalakshmi; Keppayan, Thirupathi; Gopal, Dharani; Sekar, Ashok Kumar; Ramalingam, Kirubagaran

2017-02-01

Microbial-derived natural products from extreme niches such as deepsea are known to possess structural and functional novelty. With this background, the present study was designed to investigate the bioprospecting potential and systematics of a deep-sea derived piezotolerant bacterial strain NIOT-Ch-40, showing affiliation to the genus Streptomyces based on 16S RNA gene similarity. Preliminary screening for the presence of biosynthetic genes like polyketide synthase I, polyketide synthase II, non ribosomal peptide synthase, 3-amino-5-hydroxybenzoic acid synthase and spiroindimicin followed by antibacterial activity testing confirmed the presence of potent bioactivity. The secondary metabolites produced during fermentation in Streptomyces broth at 28 °C for 7 days were extracted with ethyl acetate. The extract exhibited a specific inhibitory activity against Gram-positive bacteria and was significantly effective (p < 0.0001) against methicillin-resistant Staphylococcus aureus (MRSA). The minimum inhibitory concentration and minimum bactericidal concentration against MRSA was 1.5 µg/mL, which was statistically significant in comparison with erythromycin. A multifaceted analysis of the Streptomyces spp. was carried out to delineate the strain NIOT-Ch-40 at a higher resolution which includes morphological, biochemical and molecular studies. Piezotolerance studies and comparison of fatty acid profiles at high pressures revealed that it could be considered as one of the taxonomic markers, especially for the strains isolated from the deep sea environments. In conclusion, the observation of comparative studies with reference strains indicated towards the strain NIOT-Ch-40 as an indigenous marine piezotolerant Streptomyces sp. with a higher probability of obtaining novel bioactive metabolites.

Schlumberger soundings near Medicine Lake, California

USGS Publications Warehouse

Zohdy, A.A.R.; Bisdorf, R.J.

1990-01-01

The use of direct current resistivity soundings to explore the geothermal potential of the Medicine Lake area in northern California proved to be challenging because of high contact resistances and winding roads. Deep Schlumberger soundings were made by expanding current electrode spacings along the winding roads. Corrected sounding data were interpreted using an automatic interpretation method. Forty-two maps of interpreted resistivity were calculated for depths extending from 20 to 1000 m. Computer animation of these 42 maps revealed that: 1) certain subtle anomalies migrate laterallly with depth and can be traced to their origin, 2) an extensive volume of low-resistivity material underlies the survey area, and 3) the three areas (east of Bullseye Lake, southwest of Glass Mountain, and northwest of Medicine Lake) may be favorable geothermal targets. Six interpreted resistivity maps and three cross-sections illustrate the above findings. -from Authors

Analysis of Deep and Shallow Traps in Semi-Insulating CdZnTe

DOE PAGES

Kim, Kihyun; Yoon, Yongsu; James, Ralph B.

2018-03-13

Trap levels which are deep or shallow play an important role in the electrical and the optical properties of a semiconductor; thus, a trap level analysis is very important in most semiconductor devices. Deep-level defects in CdZnTe are essential in Fermi level pinning at the middle of the bandgap and are responsible for incomplete charge collection and polarization effects. However, a deep level analysis in semi-insulating CdZnTe (CZT) is very difficult. Theoretical capacitance calculation for a metal/insulator/CZT (MIS) device with deep-level defects exhibits inflection points when the donor/acceptor level crosses the Fermi level in the surface-charge layer (SCL). Three CZTmore » samples with different resistivities, 2 × 10 4 (n-type), 2 × 10 6 (p-type), and 2 × 10 10 (p-type) Ω·cm, were used in fabricating the MIS devices. These devices showed several peaks in their capacitance measurements due to upward/downward band bending that depend on the surface potential. In conclusion, theoretical and experimental capacitance measurements were in agreement, except in the fully compensated case.« less

Analysis of Deep and Shallow Traps in Semi-Insulating CdZnTe

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Kihyun; Yoon, Yongsu; James, Ralph B.

Trap levels which are deep or shallow play an important role in the electrical and the optical properties of a semiconductor; thus, a trap level analysis is very important in most semiconductor devices. Deep-level defects in CdZnTe are essential in Fermi level pinning at the middle of the bandgap and are responsible for incomplete charge collection and polarization effects. However, a deep level analysis in semi-insulating CdZnTe (CZT) is very difficult. Theoretical capacitance calculation for a metal/insulator/CZT (MIS) device with deep-level defects exhibits inflection points when the donor/acceptor level crosses the Fermi level in the surface-charge layer (SCL). Three CZTmore » samples with different resistivities, 2 × 10 4 (n-type), 2 × 10 6 (p-type), and 2 × 10 10 (p-type) Ω·cm, were used in fabricating the MIS devices. These devices showed several peaks in their capacitance measurements due to upward/downward band bending that depend on the surface potential. In conclusion, theoretical and experimental capacitance measurements were in agreement, except in the fully compensated case.« less

Deep features for efficient multi-biometric recognition with face and ear images

NASA Astrophysics Data System (ADS)

Omara, Ibrahim; Xiao, Gang; Amrani, Moussa; Yan, Zifei; Zuo, Wangmeng

2017-07-01

Recently, multimodal biometric systems have received considerable research interest in many applications especially in the fields of security. Multimodal systems can increase the resistance to spoof attacks, provide more details and flexibility, and lead to better performance and lower error rate. In this paper, we present a multimodal biometric system based on face and ear, and propose how to exploit the extracted deep features from Convolutional Neural Networks (CNNs) on the face and ear images to introduce more powerful discriminative features and robust representation ability for them. First, the deep features for face and ear images are extracted based on VGG-M Net. Second, the extracted deep features are fused by using a traditional concatenation and a Discriminant Correlation Analysis (DCA) algorithm. Third, multiclass support vector machine is adopted for matching and classification. The experimental results show that the proposed multimodal system based on deep features is efficient and achieves a promising recognition rate up to 100 % by using face and ear. In addition, the results indicate that the fusion based on DCA is superior to traditional fusion.

Accelerated degradation of polyetheretherketone and its composites in the deep sea

PubMed Central

Wang, Jianzhang; Jiang, Pengfei; Yan, Fengyuan

2018-01-01

The performance of polymer composites in seawater, under high hydrostatic pressure (typically few tens of MPa), for simulating exposures at great depths in seas and oceans, has been little studied. In this paper, polyetheretherketone (PEEK) and its composites reinforced by carbon fibres and glass fibres were prepared. The seawater environment with different seawater hydrostatic pressure ranging from normal pressure to 40 MPa was simulated with special equipment, in which the seawater absorption and wear behaviour of PEEK and PEEK-based composites were examined in situ. The effects of seawater hydrostatic pressure on the mechanical properties, wear resistance and microstructure of PEEK and its composites were focused on. The results showed that seawater absorption of PEEK and its composites were greatly accelerated by increased hydrostatic pressure in the deep sea. Affected by seawater absorption, both for neat PEEK and composites, the degradation on mechanical properties, wear resistance and crystallinity were induced, the degree of which was increasingly serious with the increase of hydrostatic pressure of seawater environment. There existed a good correlation in an identical form of exponential function between the wear rate and the seawater hydrostatic pressure. Moreover, the corresponding mechanisms of the effects of deep-sea hydrostatic pressure were also discussed. PMID:29765645

The use of antimicrobial-impregnated PMMA to manage periprosthetic infections: controversial issues and the latest developments.

PubMed

Tan, H L; Lin, W T; Tang, T T

2012-10-01

Despite improvements in intraoperative antimicrobial procedures, in surgical techniques and in implant design for joint replacement, periprosthetic infection after arthroplasty is still one of the most challenging problems encountered by orthopedic surgeons. Systemic antibiotics are not sufficiently effective to eradicate such deep infections because of the impaired blood circulation and low antibiotic concentration at the implantation site. As a local drug delivery system, antibiotic-impregnated PMMA (polymethylmethacrylate) bone cements have been widely used for prophylaxis or treatment of deep infections after total joint replacement. However, the effectiveness of antibiotic-loaded PMMA in preventing infections after arthroplasty is still controversial. Furthermore, the outcomes of established deep infections treated with this technique are not consistent. The local use of antibiotics has led to the emergence of antibiotic-resistant bacterial strains and has adverse effects on the function of osteogenic cells. Recently, many efforts have been made to identify new antibacterial agents that can be loaded into PMMA. These antimicrobial agents should exhibit good antibacterial activity against antibiotic-resistant strains and should simultaneously enhance osteointegration between the PMMA and the bone tissue. PMMA loaded with chitosan or chitosan derivatives has been demonstrated to induce improved osteogenic activity and to exhibit antibacterial activity in a preclinical study.

Accelerated degradation of polyetheretherketone and its composites in the deep sea.

PubMed

Liu, Hao; Wang, Jianzhang; Jiang, Pengfei; Yan, Fengyuan

2018-04-01

The performance of polymer composites in seawater, under high hydrostatic pressure (typically few tens of MPa), for simulating exposures at great depths in seas and oceans, has been little studied. In this paper, polyetheretherketone (PEEK) and its composites reinforced by carbon fibres and glass fibres were prepared. The seawater environment with different seawater hydrostatic pressure ranging from normal pressure to 40 MPa was simulated with special equipment, in which the seawater absorption and wear behaviour of PEEK and PEEK-based composites were examined in situ . The effects of seawater hydrostatic pressure on the mechanical properties, wear resistance and microstructure of PEEK and its composites were focused on. The results showed that seawater absorption of PEEK and its composites were greatly accelerated by increased hydrostatic pressure in the deep sea. Affected by seawater absorption, both for neat PEEK and composites, the degradation on mechanical properties, wear resistance and crystallinity were induced, the degree of which was increasingly serious with the increase of hydrostatic pressure of seawater environment. There existed a good correlation in an identical form of exponential function between the wear rate and the seawater hydrostatic pressure. Moreover, the corresponding mechanisms of the effects of deep-sea hydrostatic pressure were also discussed.

Monitoring therapy responses at the leukemic subclone level by ultra-deep amplicon resequencing in acute myeloid leukemia.

PubMed

Ojamies, P N; Kontro, M; Edgren, H; Ellonen, P; Lagström, S; Almusa, H; Miettinen, T; Eldfors, S; Tamborero, D; Wennerberg, K; Heckman, C; Porkka, K; Wolf, M; Kallioniemi, O

2017-05-01

In our individualized systems medicine program, personalized treatment options are identified and administered to chemorefractory acute myeloid leukemia (AML) patients based on exome sequencing and ex vivo drug sensitivity and resistance testing data. Here, we analyzed how clonal heterogeneity affects the responses of 13 AML patients to chemotherapy or targeted treatments using ultra-deep (average 68 000 × coverage) amplicon resequencing. Using amplicon resequencing, we identified 16 variants from 4 patients (frequency 0.54-2%) that were not detected previously by exome sequencing. A correlation-based method was developed to detect mutation-specific responses in serial samples across multiple time points. Significant subclone-specific responses were observed for both chemotherapy and targeted therapy. We detected subclonal responses in patients where clinical European LeukemiaNet (ELN) criteria showed no response. Subclonal responses also helped to identify putative mechanisms underlying drug sensitivities, such as sensitivity to azacitidine in DNMT3A mutated cell clones and resistance to cytarabine in a subclone with loss of NF1 gene. In summary, ultra-deep amplicon resequencing method enables sensitive quantification of subclonal variants and their responses to therapies. This approach provides new opportunities for designing combinatorial therapies blocking multiple subclones as well as for real-time assessment of such treatments.

Deterministic modeling of the impact of underground structures on urban groundwater temperature.

PubMed

Attard, Guillaume; Rossier, Yvan; Winiarski, Thierry; Eisenlohr, Laurent

2016-12-01

Underground structures have a major influence on groundwater temperature and have a major contribution on the anthropogenic heat fluxes into urban aquifers. Groundwater temperature is crucial for resource management as it can provide operational sustainability indicators for groundwater quality and geothermal energy. Here, a three dimensional heat transport modeling approach was conducted to quantify the thermally affected zone (TAZ, i.e. increase in temperature of more than +0.5°C) caused by two common underground structures: (1) an impervious structure and (2) a draining structure. These design techniques consist in (1) ballasting the underground structure in order to resist hydrostatic pressure, or (2) draining the groundwater under the structure in order to remove the hydrostatic pressure. The volume of the TAZ caused by these underground structures was shown to range from 14 to 20 times the volume of the underground structure. Additionally, the cumulative impact of underground structures was assessed under average thermal conditions at the scale of the greater Lyon area (France). The heat island effect caused by underground structures was highlighted in the business center of the city. Increase in temperature of more than +4.5°C were locally put in evidence. The annual heat flow from underground structures to the urban aquifer was computed deterministically and represents 4.5GW·h. Considering these impacts, the TAZ of deep underground structures should be taken into account in the geothermal potential mapping. Finally, the amount of heat energy provided should be used as an indicator of heating potential in these areas. Copyright © 2016 Elsevier B.V. All rights reserved.

Improvement of mechanical properties and life extension of high reliability structural components by laser shock processing

NASA Astrophysics Data System (ADS)

Ocaña, J. L.; Morales, M.; Porro, J. A.; Iordachescu, D.; Díaz, M.; Ruiz de Lara, L.; Correa, C.

2011-05-01

Profiting by the increasing availability of laser sources delivering intensities above 109 W/cm2 with pulse energies in the range of several Joules and pulse widths in the range of nanoseconds, laser shock processing (LSP) is being consolidating as an effective technology for the improvement of surface mechanical and corrosion resistance properties of metals and is being developed as a practical process amenable to production engineering. The main acknowledged advantage of the laser shock processing technique consists on its capability of inducing a relatively deep compression residual stresses field into metallic alloy pieces allowing an improved mechanical behaviour, explicitly, the life improvement of the treated specimens against wear, crack growth and stress corrosion cracking. Following a short description of the theoretical/computational and experimental methods developed by the authors for the predictive assessment and experimental implementation of LSP treatments, experimental results on the residual stress profiles and associated surface properties modification successfully reached in typical materials (specifically Al and Ti alloys) under different LSP irradiation conditions are presented. In particular, the analysis of the residual stress profiles obtained under different irradiation parameters and the evaluation of the corresponding induced surface properties as roughness and wear resistance are presented.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Yanhong; Gao, Ping; Li, La

Pure Si{sub x}C{sub 1−x} (x > 0.5) and B-containing Si{sub x}C{sub 1−x} (x > 0.5) based resistive switching devices (RSD) with the structure of Ag/Si{sub x}C{sub 1−x}/p-Si were fabricated and their switching characteristics and mechanism were investigated systematically. Percolation mechanism through trapping/ de-trapping at defect states was suggested for the switching process. Through the introduction of B atoms into Si{sub x}C{sub 1−x}, the density of defect states was reduced, then, the SET and RESET voltages were also decreased. Based on the percolation theory, the dependence of SET/RESET voltage on the density of defect states was analyzed. These results supply a deep understanding for themore » SiC-based RSD, which have a potential application in extreme ambient conditions.« less

Evaluation results for the positive deep-UV resist AZ DX 46

NASA Astrophysics Data System (ADS)

Spiess, Walter; Lynch, Thomas J.; Le Cornec, Charles; Escher, Gary C.; Kinoshita, Yoshiaki; Kochan, John; Kudo, Takanori; Masuda, Seiya; Mourier, Thierry; Nozaki, Yuko; Olson, Setha G.; Okazaki, Hiroshi; Padmanaban, Munirathna; Pawlowski, Georg; Przybilla, Klaus J.; Roeschert, Horst; Suehiro, Natusmi; Vinet, Francoise; Wengenroth, Horst

1994-05-01

This contribution emphasizes resist application site by communicating lithographic results for AZ DX 46, obtained using the GCA XLS 7800/31 stepper, NA equals 0.53, equipped with krypton fluoride excimer laser ((lambda) equals 248 nm), model 4500 D, as exposure source, delivered by Cymer Laser Technologies. As far as delay time experiments are concerned ASM-L PAS 5500/70 stepper, NA equals 0.42, was used in combination with Lambda Physik excimer laser, model 248 L.

Designing skin response meter for psycho galvanic reflex

NASA Astrophysics Data System (ADS)

Dhokalia, Dhruv M.; Atreya, Parul; Kumar, Arun

2011-12-01

Human skin offers some resistance to current and voltage. This resistance changes with the emotional state of the body. The circuit proposed here measures changes in our skin resistance following changes in our mental state. In the relaxed state, the resistance offered by the skin is as high as 2 mega-ohms or more, which reduces to 500 kilo-ohms or less when the emotional stress is too high. The reduction in skin resistance is related to increased blood flow and permeability followed by the physiological changes during high stress. This increases the electrical conductivity of the skin. This circuit is useful to monitor the skin's response to relaxation techniques. It is very sensitive and shows response during a sudden moment of stress. Even a deep sigh will give response in the circuit. The circuit uses a sensitive amplifier to sense variations in the skin resistance. IC CA3140 is designed as a resistance- to-voltage converter that outputs varying voltage based on the skin's conductivity.

Chesapeake Bay impact structure: A blast from the past

USGS Publications Warehouse

Powars, David S.; Edwards, Lucy E.; Gohn, Gregory S.; Horton, J. Wright

2015-10-28

Since its discovery in the early 1990s, scientists have conducted deep drilling and geophysical surveys of the impact structure to find out more about its size, composition, structure, age, and biological effects and to understand its lingering influences on the regional groundwater system. These efforts culminated in the drilling of a 1-mile-deep, continuously sampled corehole in 2005 by an international group of scientists and agencies.

Cytotoxic and Antibacterial Angucycline- and Prodigiosin- Analogues from the Deep-Sea Derived Streptomyces sp. SCSIO 11594

PubMed Central

Song, Yongxiang; Liu, Guangfu; Li, Jie; Huang, Hongbo; Zhang, Xing; Zhang, Hua; Ju, Jianhua

2015-01-01

Two new C-glycoside angucyclines, marangucycline A (1) and marangucycline B (2), along with three known compounds, dehydroxyaquayamycin (3), undecylprodigiosin (4) and metacycloprodigiosin (5), have been identified as products of the deep-sea sediment strain Streptomyces sp. SCSIO 11594. New structures were elucidated on the basis of HRESIMS, 1D and 2D NMR analyses and comparisons to previously reported datasets. Compounds 2 and 4 displayed in vitro cytotoxicity against four cancer cell lines A594, CNE2, HepG2, MCF-7 superior to those obtained with cisplatin, the positive control. Notably, compound 2 bearing a keto-sugar displayed significant cytotoxicity against cancer cell lines with IC50 values ranging from 0.24 to 0.56 μM; An IC50 value of 3.67 μM was found when using non-cancerous hepatic cell line HL7702, demonstrating the cancer cell selectivity of 2. Compounds 1–3 were proved to have weak antibacterial activities against Enterococcus faecalis ATCC29212 with an MIC value of 64.0 μg/mL. Moreover, 3 displayed selective antibacterial activity against methicillin-resistant Staphylococcus epidermidis shhs-E1 with an MIC value of 16.0 μg/mL. PMID:25786061

Identifying MicroRNAs and Transcript Targets in Jatropha Seeds

PubMed Central

Galli, Vanessa; Guzman, Frank; de Oliveira, Luiz F. V.; Loss-Morais, Guilherme; Körbes, Ana P.; Silva, Sérgio D. A.; Margis-Pinheiro, Márcia M. A. N.; Margis, Rogério

2014-01-01

MicroRNAs, or miRNAs, are endogenously encoded small RNAs that play a key role in diverse plant biological processes. Jatropha curcas L. has received significant attention as a potential oilseed crop for the production of renewable oil. Here, a sRNA library of mature seeds and three mRNA libraries from three different seed development stages were generated by deep sequencing to identify and characterize the miRNAs and pre-miRNAs of J. curcas. Computational analysis was used for the identification of 180 conserved miRNAs and 41 precursors (pre-miRNAs) as well as 16 novel pre-miRNAs. The predicted miRNA target genes are involved in a broad range of physiological functions, including cellular structure, nuclear function, translation, transport, hormone synthesis, defense, and lipid metabolism. Some pre-miRNA and miRNA targets vary in abundance between the three stages of seed development. A search for sequences that produce siRNA was performed, and the results indicated that J. curcas siRNAs play a role in nuclear functions, transport, catalytic processes and disease resistance. This study presents the first large scale identification of J. curcas miRNAs and their targets in mature seeds based on deep sequencing, and it contributes to a functional understanding of these miRNAs. PMID:24551031

Sputtered gold mask for deep chemical etching of silicon

NASA Technical Reports Server (NTRS)

Pisciotta, B. P.; Gross, C.; Olive, R. S.

1975-01-01

Sputtered mask resists chemical attack from acid and has adherence to withstand prolonged submergence in etch solution without lifting from silicon surface. Even under prolonged etch conditions with significant undercutting, gold mask maintained excellent adhesion to silicon surface and imperviousness to acid.

Endodontic pathogens causing deep neck space infections: clinical impact of different sampling techniques and antibiotic susceptibility.

PubMed

Poeschl, Paul W; Crepaz, Valentina; Russmueller, Guenter; Seemann, Rudolf; Hirschl, Alexander M; Ewers, Rolf

2011-09-01

The aims of the present study were to compare microbial populations in patients suffering from deep neck space abscesses caused by primary endodontic infections by sampling the infections with aspiration or swabbing techniques and to determine the susceptibility rates of the isolated bacteria to commonly used antibiotics. A total of 89 patients with deep neck space abscesses caused by primary endodontic infections requiring extraoral incision and drainage under general anesthesia were included. Either aspiration or swabbing was used to sample microbial pus specimens. The culture of the microbial specimens and susceptibility testing were performed following standard procedures. A total of 142 strains were recovered from 76 patients. In 13 patients, no bacteria were found. The predominant bacteria observed were streptococci (36%), staphylococci (13%), Prevotella (8%), and Peptostreptococcus (6%). A statistically significant greater number of obligate anaerobes were found in the aspiration group. The majority of patients presented a mixed aerobic-anaerobic population of bacterial flora (62%). The antibiotic resistance rates for the predominant bacteria were 10% for penicillin G, 9% for amoxicillin, 0% for amoxicillin clavulanate, 24% for clindamycin, and 24% for erythromycin. The results of our study indicated that a greater number of anaerobes were found when sampling using the aspiration technique. Penicillin G and aminopenicillins alone are not always sufficient for the treatment of severe deep neck space abscesses; beta-lactamase inhibitor combinations are more effective. Bacteria showed significant resistant rates to clindamycin. Thus, its single use in penicillin-allergic patients has to be carefully considered. Copyright © 2011 American Association of Endodontists. Published by Elsevier Inc. All rights reserved.

Vascular reactivity of rabbit isolated renal and femoral resistance arteries in renal wrap hypertension.

PubMed

Khammy, Makhala M; Angus, James A; Wright, Christine E

2016-02-15

In rabbits with cellophane renal wrap hypertension, hindquarter and total vascular resistance changes to pressor and depressor agents are amplified compared to those of normotensive rabbits. The aim of the present study was to evaluate the in vitro pharmacodynamics of hypertensive and normotensive rabbit small artery segments isolated from the renal and hindquarter vascular beds. Using wire myography, the full range (Emax) and sensitivity (EC50) to a range of agonists of segments of renal interlobar (≈ 600 µm i.d.), renal arcuate (≈ 250 µm i.d.) and deep femoral branch (≈ 250 µm i.d.) arteries were assessed under normalised conditions of passive tension. Interlobar arteries from hypertensive rabbits were more sensitive (EC50) than those from normotensive rabbits to noradrenaline (6-fold), methoxamine (3-fold) and angiotensin II (3-fold). Arcuate artery reactivity was largely unaffected by hypertension. Deep femoral arteries from hypertensive rabbits had enhanced sensitivity only to noradrenaline (2-fold) and methoxamine (4-fold). Sensitivity to relaxation by acetylcholine was unaffected by hypertension in all arteries. Deep femoral arteries from hypertensive rabbits were more sensitive to sodium nitroprusside than normotensive counterparts. Adenosine caused little relaxation in renal arteries, but full relaxation in deep femoral arteries, unaltered by hypertension. This study found substantial heterogeneity in the pharmacodynamic profile of vessels isolated from different vascular beds and between arterial segments within the kidney. These profiles were differentially affected by hypertension suggesting that hypertension per se is not a resultant of general vascular dysfunction. Copyright © 2016 Elsevier B.V. All rights reserved.

Observations of Coherent Flow Structures Over Subaqueous High- and Low- Angle Dunes

NASA Astrophysics Data System (ADS)

Kwoll, E.; Venditti, J. G.; Bradley, R. W.; Winter, C.

2017-11-01

Large-scale coherent flow structures (CFSs) above dunes are the dominant source of flow resistance and constitute the principal mechanism for sediment transport and mixing in sand bed river and estuarine systems. Based on laboratory observations, CFS formation has been previously linked to flow separation downstream of high-angle dunes with lee slopes of 30°. How CFSs form in natural, deep rivers and estuaries where dunes exhibit lower lee slopes and intermittent flow separation is not well understood. Here we present particle image velocimetry measurements from an experiment where dune lee slope was systematically varied (30°, 20°, and 10°), while other geometric and hydraulic parameters were held constant. We show that CFSs form downstream of all three dune geometries from shear layer vortices in the dune lee. The mode of CFS formation undergoes a low-frequency oscillation with periods of intense vortex shedding interspersed with periods of rare vortex shedding. Streamwise alignment of several vortices during periods of intense shedding results in wedge-shaped CFSs that are advected above the dune stoss side. Streamwise length scales of wedge-shaped CFS correspond to large-scale motions (LSMs). We hypothesize that the advection of LSM over the dune crest triggers the periods of intense shedding in the dune lee. LSMs are weaker and smaller above low-angle dunes; however, the low-frequency oscillation in CFS formation periods persists. The formation of smaller and weaker CFS results in a reduction of flow resistance over low-angle dunes.

Nb-Base FS-85 Alloy as a Candidate Structural Material for Space Reactor Applications: Effects of Thermal Aging

NASA Astrophysics Data System (ADS)

Leonard, Keith J.; Busby, Jeremy T.; Hoelzer, David T.; Zinkle, Steven J.

2009-04-01

The proposed uses of fission reactors for manned or deep space missions have typically relied on the potential use of refractory metal alloys as structural materials. Throughout the history of these programs, a leading candidate has been Nb-1Zr, due to its good fabrication and welding characteristics. However, the less-than-optimal creep resistance of this alloy has encouraged interest in the more complex FS-85 (Nb-28Ta-10W-1Zr) alloy. Despite this interest, only a relatively small database exists for the properties of FS-85. Database gaps include the potential microstructural instabilities that can lead to mechanical property degradation. In this work, changes in the microstructure and mechanical properties of FS-85 were investigated following 1100 hours of thermal aging at 1098, 1248, and 1398 K. The changes in electrical resistivity, hardness, and tensile properties between the as-annealed and aged materials are compared. Evaluation of the microstructural changes was performed through optical microscopy (OM), scanning electron microscopy (SEM), and transmission electron microscopy (TEM). The development of intragranular and grain-boundary precipitation of Zr-rich compounds as a function of aging temperature was followed. Brittle tensile behavior was measured in the material aged at 1248 K, while ductile behavior occurred in samples aged above and below this temperature. The effect of temperature on the under- and overaging of the grain-boundary particles is believed to have contributed to the mechanical property behavior of the aged materials.

Ultrafast carrier dynamics in LT-GaAs doped with Si delta layers

NASA Astrophysics Data System (ADS)

Khusyainov, D. I.; Dekeyser, C.; Buryakov, A. M.; Mishina, E. D.; Galiev, G. B.; Klimov, E. A.; Pushkarev, S. S.; Klochkov, A. N.

2017-10-01

We characterized the ultrafast properties of LT-GaAs doped with silicon δ-layers and introduced delta-doping (δ-doping) as efficient method for enhancing the properties of GaAs-based structures which can be useful for terahertz (THz) antenna, ultrafast switches and other high frequency applications. Low temperature grown GaAs (LT-GaAs) became one of the most promising materials for ultrafast optical and THz devices due to its short carrier lifetime and high carrier mobility. Low temperature growth leads to a large number of point defects and an excess of arsenic. Annealing of LT-GaAs creates high resistivity through the formation of As-clusters, which appear due to the excess of arsenic. High resistivity is very important for THz antennas so that voltage can be applied without the risk of breakdown. With δ-Si doping, control of As-clusters is possible, since after annealing, clusters align in the plane where the δ-doping occurs. In this paper, we compare the properties of LT-GaAs-based planar structures with and without δ-Si doping and subsequent annealing. We used pump-probe transient reflectivity as a probe for ultrafast carrier dynamics in LT-GaAs. The results of the experiment were interpreted using the Ortiz model and show that the δ-Si doping increases deep donor and acceptor concentrations and decreases the photoinduced carrier lifetime as compared with LT-GaAs with same growth and annealing temperatures, but without doping.

Deep RNA-Seq profile reveals biodiversity, plant-microbe interactions and a large family of NBS-LRR resistance genes in walnut (Juglans regia) tissues.

PubMed

Chakraborty, Sandeep; Britton, Monica; Martínez-García, P J; Dandekar, Abhaya M

2016-03-01

Deep RNA-Seq profiling, a revolutionary method used for quantifying transcriptional levels, often includes non-specific transcripts from other co-existing organisms in spite of stringent protocols. Using the recently published walnut genome sequence as a filter, we present a broad analysis of the RNA-Seq derived transcriptome profiles obtained from twenty different tissues to extract the biodiversity and possible plant-microbe interactions in the walnut ecosystem in California. Since the residual nature of the transcripts being analyzed does not provide sufficient information to identify the exact strain, inferences made are constrained to the genus level. The presence of the pathogenic oomycete Phytophthora was detected in the root through the presence of a glyceraldehyde-3-phosphate dehydrogenase. Cryptococcus, the causal agent of cryptococcosis, was found in the catkins and vegetative buds, corroborating previous work indicating that the plant surface supported the sexual cycle of this human pathogen. The RNA-Seq profile revealed several species of the endophytic nitrogen fixing Actinobacteria. Another bacterial species implicated in aerobic biodegradation of methyl tert-butyl ether (Methylibium petroleiphilum) is also found in the root. RNA encoding proteins from the pea aphid were found in the leaves and vegetative buds, while a serine protease from mosquito with significant homology to a female reproductive tract protease from Drosophila mojavensis in the vegetative bud suggests egg-laying activities. The comprehensive analysis of RNA-seq data present also unraveled detailed, tissue-specific information of ~400 transcripts encoded by the largest family of resistance (R) genes (NBS-LRR), which possibly rationalizes the resistance of the specific walnut plant to the pathogens detected. Thus, we elucidate the biodiversity and possible plant-microbe interactions in several walnut (Juglans regia) tissues in California using deep RNA-Seq profiling.

Identification of deep magnetized structures in the tectonically active Chlef area (Algeria) from aeromagnetic data using wavelet and ridgelet transforms

NASA Astrophysics Data System (ADS)

Boukerbout, H.; Abtout, A.; Gibert, D.; Henry, B.; Bouyahiaoui, B.; Derder, M. E. M.

2018-07-01

The Chlef region constitutes a key area to study neotectonics structures and their geodynamical context. Aeromagnetic data analyzed using different processing methods (shaded relief technique, computation of vertical gradient, upward continuation, use of the continuous wavelet transform and ridgelet transform), allow establishing a structural image of emerging and deep structures both onshore and offshore. Magnetic anomalies, over the Mediterranean Sea, the Chlef basin and the Ouarsenis Mounts, are well-correlated with the known geological structures. Long and short wavelength anomalies have been distinguished. The short wavelength anomalies are associated with the volcanic rocks on the coast from Chenoua to El Marsa and with the basement in the Boukadir zone in the sedimentary Chlef basin. The long wavelength anomalies to the South are associated mainly with deep E-W structures, limiting the Chlef basin. To the North, similar structures have been identified in the Mediterranean Sea. The compilation of the identified magnetic features leads to geometrical shape corroborating the structure in blocks of the Chlef basin.

On the physics of frequency-domain controlled source electromagnetics in shallow water. 1: isotropic conductivity

NASA Astrophysics Data System (ADS)

Chave, Alan D.; Everett, Mark E.; Mattsson, Johan; Boon, James; Midgley, Jonathan

2017-02-01

In recent years, marine controlled source electromagnetics (CSEM) has found increasing use in hydrocarbon exploration due to its ability to detect thin resistive zones beneath the seafloor. It is the purpose of this paper to evaluate the physics of CSEM for an ocean whose electrical thickness is comparable to or much thinner than that of the overburden using the in-line configuration through examination of the elliptically polarized seafloor electric field, the time-averaged energy flow depicted by the real part of the complex Poynting vector, energy dissipation through Joule heating and the Fréchet derivatives of the seafloor field with respect to the subseafloor conductivity that is assumed to be isotropic. The deep water (ocean layer electrically much thicker than the overburden) seafloor EM response for a model containing a resistive reservoir layer has a greater amplitude and reduced phase as a function of offset compared to that for a half-space, or a stronger and faster response. For an ocean whose electrical thickness is comparable to or much smaller than that of the overburden, the electric field displays a greater amplitude and reduced phase at small offsets, shifting to a stronger amplitude and increased phase at intermediate offsets and a weaker amplitude and enhanced phase at long offsets, or a stronger and faster response that first changes to stronger and slower, and then transitions to weaker and slower. These transitions can be understood by visualizing the energy flow throughout the structure caused by the competing influences of the dipole source and guided energy flow in the reservoir layer, and the air interaction caused by coupling of the entire subseafloor resistivity structure with the sea surface. A stronger and faster response occurs when guided energy flow is dominant, while a weaker and slower response occurs when the air interaction is dominant. However, at intermediate offsets for some models, the air interaction can partially or fully reverse the direction of energy flux in the reservoir layer toward rather than away from the source, resulting in a stronger and slower response. The Fréchet derivatives are dominated by preferential sensitivity to the reservoir layer conductivity for all water depths except at high frequencies, but also display a shift with offset from the galvanic to the inductive mode in the underburden and overburden due to the interplay of guided energy flow and the air interaction. This means that the sensitivity to the horizontal conductivity is almost as strong as to the vertical component in the shallow parts of the subsurface, and in fact is stronger than the vertical sensitivity deeper down. However, the sensitivity to horizontal conductivity is still weak compared to the vertical component within thin resistive regions. The horizontal sensitivity is gradually decreased when the water becomes deep. These observations in part explain the success of shallow towed CSEM using only measurements of the in-line component of the electric field.

Deep-water zooplankton in the Mediterranean Sea: Results from a continuous, synchronous sampling over different regions using sediment traps

NASA Astrophysics Data System (ADS)

Danovaro, R.; Carugati, L.; Boldrin, A.; Calafat, A.; Canals, M.; Fabres, J.; Finlay, K.; Heussner, S.; Miserocchi, S.; Sanchez-Vidal, A.

2017-08-01

Information on the dynamics of deep-sea biota is extremely scant particularly for long-term time series on deep-sea zooplankton. Here, we present the results of a deep-sea zooplankton investigation over one annual cycle based on samples from sediment trap moorings in three sub-basins along the Mediterranean Sea. Deep-sea zooplankton assemblages were dominated by copepods, as in shallow waters, only in the Adriatic Sea (>60% of total abundance), but not in the deep Ionian Sea, where ostracods represented >80%, neither in the deep Alboran Sea, where polychaetes were >70%. We found that deep-sea zooplankton assemblages: i) are subjected to changes in their abundance and structure over time, ii) are characterized by different dominant taxa in different basins, and iii) display clear taxonomic segregation between shallow and near-bottom waters. Zooplankton biodiversity decreases with increasing water depth, but the equitability increases. We suggest here that variations of zooplankton abundance and assemblage structure are likely influenced by the trophic condition characterizing the basins. Our findings provide new insights on this largely unknown component of the deep ocean, and suggest that changes in the export of organic matter from the photic zone, such as those expected as a consequence of global change, can significantly influence zooplankton assemblages in the largest biome on Earth.

Ert Applied to the Characterization of Subsidence in Mexico City: Ancient Structures Affecting Urban Utilities

NASA Astrophysics Data System (ADS)

Arango, C.; Chavez, R. E.; Cifuentes-Nava, G.; Hernández-Quintero, E.

2013-05-01

The problem of subsidence in Mexico City is basically due to the rapid extraction of groundwater for water supply in addition to the geological conditions. The most typical manifestations of the phenomena are presented as cracks and fractures due to compaction of ancient lake clayish sediments. This phenomenon has caused major affectations to city infrastructure because of the differential subsidence. Fractured buildings, sinkholes, among others manifestations, are potentially sources of collapses, which exposes the population to a serious risk. A small portion of Iztacalco County is being affected by this problem, specifically, in a crossroad formed by two important avenues: La Viga and Plutarco Elias Calles, where the area apparently increases its topographical level. The Electrical Resistivity Tomography technique was selected in order to obtain a resistivity image of the subsoil, which allows identify the main features associated to the terrain uprising. Three (ERT) profiles 200 m, were deployed on the mentioned crossroad in order to characterize the subsurface structures affecting the topographical level of the avenues. A big resistivity anomaly (~ 1000 ohm-m) could be observed towards the central part of the crossroad, coinciding with the major lifting level on surface. This feature appears at 15 m deep in all the profiles and depicts an approximate extension of 100 m in the E-W direction and 60 m in N-S axis. On the other hand, the surrounding material seems to correspond to a higher-saturated environment (lacustrine sediments <10 ohm-m). Shallow anomalies were also detected related to urban artifacts (pipes, sewers, etcetera). The apparently terrain uprising can be associated to a differential subsidence. However, the mentioned avenues were ancient water channels since pre-Hispanic times, where the caudal was enough to allow small steam boating at late nineteenth century. These waterways served as main routes for the exchange of goods during colonial times until the early twentieth century, and just at the junction of the channels, there was a custom gate, where the merchandise used to be registered before its arrival to the downtown market. We suspect that these high resistivity structures could be remains of those buildings that were not removed when the authorities decided to drain the channels in 1921.

Halomonhystera disjuncta - a young-carrying nematode first observed for the Baltic Sea in deep basins within chemical munitions disposal sites

NASA Astrophysics Data System (ADS)

Grzelak, Katarzyna; Kotwicki, Lech

2016-06-01

Three deep basins in the Baltic Sea were investigated within the framework of the CHEMSEA project (Chemical Munitions Search & Assessment), which aims to evaluate the ecological impact of chemical warfare agents dumped after World War II. Nematode communities, which comprise the most numerous and diverse organisms in the surveyed areas, were investigated as a key group of benthic fauna. One of the most successful nematode species was morphologically identified as Halomonhystera disjuncta (Bastian, 1865). The presence of this species, which is an active coloniser that is highly resistant to disturbed environments, may indicate that the sediments of these disposal sites are characterised by toxic conditions that are unfavourable for other metazoans. Moreover, ovoviviparous reproductive behaviour in which parents carry their brood internally, which is an important adaptation to harsh environmental conditions, was observed for specimens from Gdansk Deep and Gotland Deep. This reproductive strategy, which is uncommon for marine nematodes, has not previously been reported for nematodes from the Baltic Sea sediment.

Lonely GPFUTV-the movement of water under the action of unknown vacuum

NASA Astrophysics Data System (ADS)

Lin, Weiyi

2013-11-01

In this paper, firstly, the experiment on the flow resistance of the aerated pipe flow is introduced. The experimental research on comparison between different volumes of air entrained is presented. Secondly, the characteristics of gravity pipe flow under the action of Torricelli's vacuum, shortly called as GPFUTV are dissertated, including creative and functional design, fundamental principle, etc. Under the joint action of an unknown vacuum energy and the formation of non-aerated flow the water flow is full-pipe and continuous, high-speed and non-rotational as distinguished from turbulent flow. Thirdly, an appeal in relation to the experimental research, the applied studies and basic theory research is given. For instance, experimental study of Torricelli's experiment phenomenon in the vacuum environment, applied study of the potential for GPFUTV to be developed for deep seawater suction technology and lifting technology for deep ocean mining, theoretical study of flow stability and flow resistance under GPFUTV condition, etc. At last, the famous GPFUTV project is illustrated. 12 years of rigorous and independent survey research.

Radiation damage and defect behavior in proton irradiated lithium-counterdoped n+p silicon solar cells

NASA Technical Reports Server (NTRS)

Stupica, John; Goradia, Chandra; Swartz, Clifford K.; Weinberg, Irving

1987-01-01

Two lithium-counterdoped n+p silicon solar cells with different lithium concentrations were irradiated by 10-MeV protons. Cell performance was measured as a function of fluence, and it was found that the cell with the highest concentration of lithium had the highest radiation resistance. Deep level transient spectroscopy which showed two deep level defects that were lithium related. Relating the defect energy levels obtained from this study with those from earlier work using 1-MeV electron irradiation shows no correlation of the defect energy levels. There is one marked similarity: the absence of the boron-interstitial-oxygen-interstitial defect. This consistency strengthens the belief that lithium interacts with oxygen to prevent the formation of the boron interstitial-oxygen interstitial defect. The results indicate that, in general, addition of lithium in small amounts to the p-base of a boron doped silicon solar cell such that the base remains p-type, tends to increase the radiation resistance of the cell.

The Causality of Evolution on Different Fitness Landscapes

NASA Astrophysics Data System (ADS)

Vyawahare, Saurabh; Austin, Robert; Zhang, Qiucen; Kim, Hyunsung; Bestoso, John

2013-03-01

Evolution of antibiotic resistance is a growing problem. One major reason why most antibiotics fail is because of mutations on drug targets (e.g. essential enzymes). Sequencing of clinically resistant isolates have shown that multiple mutational-hotspots exist in coding regions, which could potentially prohibit the binding of drugs. However, it is not clear whether the appearance of each mutation is random or influenced by other factors. In this paper, we compare evolution of resistance to ciprofloxacin from two distinct but well characterized genetic backgrounds. By combining our recently developed evolution reactor and deep whole-genome sequencing, we show different alleles of σs factor lead to fixation of different mutations in gyrA gene that confer ciprofloxacin resistance to bacteria Escherichia coli. Such causality of evolution in different genes provides an opportunity to control the evolution of antibiotic resistance. Sponsored by the NCI/NIH Physical Sciences Oncology Centers

Significance of ground-water chemistry in performance of North Sahara Tube wells in Algeria and Tunisia

USGS Publications Warehouse

Clarke, Frank Eldridge; Jones, Blair F.

1972-01-01

Nine ground-water samples from the principal shallow and deep North Sahara aquifers of Algeria and Tunisia were examined to determine the relation of their chemical composition to corrosion and mineral encrustation thought to be contributing to observed decline in well capacities within a UNESCO/UNDP Special Fund Project area. Although the shallow and deep waters differ significantly in certain quality factors, all are sulfochloride types with corrosion potentials ranging from moderate to extreme. None appear to be sufficiently supersaturated with troublesome mineral species to cause rapid or severe encrustation of filter pipes or other well parts. However, calcium carbonate encrustation of deep-well cooling towers and related irrigation pipes can be expected because of loss of carbon dioxide and water during evaporative cooling. Corrosion products, particularly iron sulfide, can be expected to deposit in wells producing waters from the deep aquifers. This could reduce filterpipe openings and increase casing roughness sufficiently to cause significant reduction in well capacity. It seems likely, however, that normal pressure reduction due to exploitation of the artesian systems is a more important control of well performance. If troublesome corrosion and related encrustation are confirmed by downhole inspection, use of corrosion-resisting materials, such as fiber-glass casing and saw-slotted filter pipe (shallow wells only), or stainless-steel screen, will minimize the effects of the waters represented by these samples. A combination of corrosion-resisting stainless steel filter pipe electrically insulated from the casing with a nonconductive spacer and cathodic protection will minimize external corrosion of steel casing, if this is found to be a problem. However, such installations are difficult to make in very deep wells and difficult to control in remote areas. Both the shallow waters and the deep waters examined in this study will tend to cause soil salinization because their salt contents are relatively high, and both have sodium absorption ratios which are unfavorable to sodium-sensitive soils and vegetation. Proper drainage and soil treatment are the only means of overcoming these problems during irrigation.

Deep mutational scanning identifies sites in influenza nucleoprotein that affect viral inhibition by MxA

PubMed Central

Ashenberg, Orr; Padmakumar, Jai

2017-01-01

The innate-immune restriction factor MxA inhibits influenza replication by targeting the viral nucleoprotein (NP). Human influenza virus is more resistant than avian influenza virus to inhibition by human MxA, and prior work has compared human and avian viral strains to identify amino-acid differences in NP that affect sensitivity to MxA. However, this strategy is limited to identifying sites in NP where mutations that affect MxA sensitivity have fixed during the small number of documented zoonotic transmissions of influenza to humans. Here we use an unbiased deep mutational scanning approach to quantify how all single amino-acid mutations to NP affect MxA sensitivity in the context of replication-competent virus. We both identify new sites in NP where mutations affect MxA resistance and re-identify mutations known to have increased MxA resistance during historical adaptations of influenza to humans. Most of the sites where mutations have the greatest effect are almost completely conserved across all influenza A viruses, and the amino acids at these sites confer relatively high resistance to MxA. These sites cluster in regions of NP that appear to be important for its recognition by MxA. Overall, our work systematically identifies the sites in influenza nucleoprotein where mutations affect sensitivity to MxA. We also demonstrate a powerful new strategy for identifying regions of viral proteins that affect inhibition by host factors. PMID:28346537

The effect of normal pulsed Nd-YAG laser irradiation on pits and fissures in human teeth.

PubMed

Bahar, A; Tagomori, S

1994-01-01

The effects of normal pulsed Nd-YAG laser irradiation on the acid resistance of human dental enamel of pits and fissures, the cleaning of the pit and fissure contents and fluoride uptake into deep pits and fissures were examined. The acid resistance of the pit and fissure enamel was evaluated by the amount of dissolved calcium per square millimeter of the surface area. The pit and fissure enamel treated with laser irradiation obtained an acid resistance 30% higher than that of the unlased controls. The cleaning effect of laser irradiation on the pit and fissure contents was compared with chemicomechanical and mechanical methods. The laser irradiation was found to clean the pits and fissures to a greater depth without alterating the shape of pits and fissures, compared with the other two methods. The distribution of calcium, phosphorus and fluoride in the enamel of the pits and fissures was then measured by electron probe microanalyzer. At the entrance and in the deep part of the pits and fissures, the fluoride content of the enamel treated with acidulated phosphate fluoride after laser irradiation was higher than that of the enamel treated with acidulated phosphate fluoride alone. These results thus suggest that Nd-YAG laser irradiation might be effective in increasing the acid resistance of the pit and fissure enamel, while removing the pit and fissure debris contents and increasing the fluoride uptake into the pit and fissure enamel.

Resistive field structures for semiconductor devices and uses therof

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marinella, Matthew; DasGupta, Sandeepan; Kaplar, Robert

The present disclosure relates to resistive field structures that provide improved electric field profiles when used with a semiconductor device. In particular, the resistive field structures provide a uniform electric field profile, thereby enhancing breakdown voltage and improving reliability. In example, the structure is a field cage that is configured to be resistive, in which the potential changes significantly over the distance of the cage. In another example, the structure is a resistive field plate. Using these resistive field structures, the characteristics of the electric field profile can be independently modulated from the physical parameters of the semiconductor device. Additionalmore » methods and architectures are described herein.« less

Ideology and Linguistic Theory: Noam Chomsky and the Deep Structure Debates.

ERIC Educational Resources Information Center

Huck, Geoffrey J.; Goldsmith, John A.

A revisionist account of the development of ideas about semantics in modern theories of language is presented, focusing on the rift between Noam Chomsky and Generative Semanticists about the concept of deep structure, or the role of meaning in grammar. The discussion re-appraises the paradigm that has dominated American linguistics since the…

Stress and Deep Structure: A Measure of Language Acquisition, Grades K-6.

ERIC Educational Resources Information Center

Milner, Joseph O.

A study was undertaken to see whether developmental patterns of language acquisition could be discovered in children beyond age five. Specifically, the study attempted to uncover a pattern in the development of the skill of stress interpretation, or the understanding of the effect of emphasis of a particular word on the deep structure of the…

Genetic homogeneity in the deep-sea grenadier Macrourus berglax across the North Atlantic Ocean

NASA Astrophysics Data System (ADS)

Coscia, Ilaria; Castilho, Rita; Massa-Gallucci, Alexia; Sacchi, Carlotta; Cunha, Regina L.; Stefanni, Sergio; Helyar, Sarah J.; Knutsen, Halvor; Mariani, Stefano

2018-02-01

Paucity of data on population structure and connectivity in deep sea species remains a major obstacle to their sustainable management and conservation in the face of ever increasing fisheries pressure and other forms of impacts on deep sea ecosystems. The roughhead grenadier Macrourus berglax presents all the classical characteristics of a deep sea species, such as slow growth and low fecundity, which make them particularly vulnerable to anthropogenic impact, due to their low resilience to change. In this study, the population structure of the roughhead grenadier is investigated throughout its geographic distribution using two sets of molecular markers: a partial sequence of the Control Region of mitochondrial DNA and species-specific microsatellites. No evidence of significant structure was found throughout the North Atlantic, with both sets of molecular markers yielding the same results of overall homogeneity. We posit two non-mutually exclusive scenarios that can explain such outcome: i) substantial high gene flow among locations, possibly maintained by larval stages, ii) very large effective size of post-glacially expanded populations. The results can inform management strategies in this by-caught species, and contribute to the broader issue of biological connectivity in the deep ocean.

Characterization of Thallium Bromide (TlBr) for Room Temperature Radiation Detectors

NASA Astrophysics Data System (ADS)

Smith, Holland McTyeire

Thallium bromide (TlBr) has emerged as a remarkably well-suited material for room temperature radiation detection. The unique combination of high-Z elements, high density, suitable band gap, and excellent electrical transport properties present in TlBr have brought device performance up to par with CdZnTe (CZT), the current market-leading room temperature radiation detector material. TlBr research is at an earlier stage than that of CZT, giving hope that the material will see even further improvement in electronic properties. Improving a resistive semiconductor material requires knowledge of deep levels present in the material and the effects of these deep levels on transport properties. Very few deep level studies have been conducted on TlBr, and none with the depth required to generate useful growth suggestions. In this dissertation, deep levels in nominally undoped and doped TlBr samples are studied with electrical and optical methods. Photo-Induced Conductivity Transient Spectroscopy (PICTS) is used to discover many deep levels in TlBr electrically. These levels are compared to sub-band gap optical transitions originating from defects observed in emission spectra. The results of this research indicate that the origin of resistivity in TlBr is likely due to deep level defects pinning the Fermi level at least ˜0.7 eV from either the conduction or valence band edge. The effect of dopants and deep levels on transport in TlBr is assessed with microwave photoconductivity decay analysis. It is found that Pb-, Se-, and O-doping decreases carrier lifetime in TlBr, whereas C-doping does not. TlBr exhibits weak ionic conductivity at room temperature, which both negatively affects the leakage current of detectors and leads to device degradation over time. Researchers are actively looking for ways to reduce or eliminate the ionic conductivity, but are faced with an intriguing challenge of materials engineering: is it possible to mitigate the ionic conduction of TlBr without harming the excellent electronic transport properties? Doping TlBr in order to control the ionic conductivity has been proposed and shown to be effective in reducing dark ionic current, but the electronic effects of the dopants has not been previously studied in detail. In this dissertation, the electronic effects of dopants introduced for ionic reasons are evaluated.

Genomic and metagenomic technologies to explore the antibiotic resistance mobilome.

PubMed

Martínez, José L; Coque, Teresa M; Lanza, Val F; de la Cruz, Fernando; Baquero, Fernando

2017-01-01

Antibiotic resistance is a relevant problem for human health that requires global approaches to establish a deep understanding of the processes of acquisition, stabilization, and spread of resistance among human bacterial pathogens. Since natural (nonclinical) ecosystems are reservoirs of resistance genes, a health-integrated study of the epidemiology of antibiotic resistance requires the exploration of such ecosystems with the aim of determining the role they may play in the selection, evolution, and spread of antibiotic resistance genes, involving the so-called resistance mobilome. High-throughput sequencing techniques allow an unprecedented opportunity to describe the genetic composition of a given microbiome without the need to subculture the organisms present inside. However, bioinformatic methods for analyzing this bulk of data, mainly with respect to binning each resistance gene with the organism hosting it, are still in their infancy. Here, we discuss how current genomic methodologies can serve to analyze the resistance mobilome and its linkage with different bacterial genomes and metagenomes. In addition, we describe the drawbacks of current methodologies for analyzing the resistance mobilome, mainly in cases of complex microbiotas, and discuss the possibility of implementing novel tools to improve our current metagenomic toolbox. © 2016 New York Academy of Sciences.

Evolution of coreceptor utilization to escape CCR5 antagonist therapy.

PubMed

Zhang, Jie; Gao, Xiang; Martin, John; Rosa, Bruce; Chen, Zheng; Mitreva, Makedonka; Henrich, Timothy; Kuritzkes, Daniel; Ratner, Lee

2016-07-01

The HIV-1 envelope interacts with coreceptors CCR5 and CXCR4 in a dynamic, multi-step process, its molecular details not clearly delineated. Use of CCR5 antagonists results in tropism shift and therapeutic failure. Here we describe a novel approach using full-length patient-derived gp160 quasispecies libraries cloned into HIV-1 molecular clones, their separation based on phenotypic tropism in vitro, and deep sequencing of the resultant variants for structure-function analyses. Analysis of functionally validated envelope sequences from patients who failed CCR5 antagonist therapy revealed determinants strongly associated with coreceptor specificity, especially at the gp120-gp41 and gp41-gp41 interaction surfaces that invite future research on the roles of subunit interaction and envelope trimer stability in coreceptor usage. This study identifies important structure-function relationships in HIV-1 envelope, and demonstrates proof of concept for a new integrated analysis method that facilitates laboratory discovery of resistant mutants to aid in development of other therapeutic agents. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

High-Throughput Processes and Structural Characterization of Single-Nanotube Based Devices for 3D Electronics

NASA Technical Reports Server (NTRS)

Kaul, A. B.; Megerian, K. G.; Baron, R. L.; Jennings, A. T.; Jang, D.; Greer, J. R.

2011-01-01

We have developed manufacturable approaches to form single, vertically aligned carbon nanotubes, where the tubes are centered precisely, and placed within a few hundred nm of 1-1.5 micron deep trenches. These wafer-scale approaches were enabled by chemically amplified resists and inductively coupled Cryo-etchers to form the 3D nanoscale architectures. The tube growth was performed using dc plasmaenhanced chemical vapor deposition (PECVD), and the materials used for the pre-fabricated 3D architectures were chemically and structurally compatible with the high temperature (700 C) PECVD synthesis of our tubes, in an ammonia and acetylene ambient. The TEM analysis of our tubes revealed graphitic basal planes inclined to the central or fiber axis, with cone angles up to 30 deg. for the particular growth conditions used. In addition, bending tests performed using a custom nanoindentor, suggest that the tubes are well adhered to the Si substrate. Tube characteristics were also engineered to some extent, by adjusting growth parameters, such as Ni catalyst thickness, pressure and plasma power during growth.

Fabrication of close-packed TES microcalorimeter arrays using superconducting molybdenum/gold transition-edge sensors

NASA Astrophysics Data System (ADS)

Finkbeiner, F. M.; Brekosky, R. P.; Chervenak, J. A.; Figueroa-Feliciano, E.; Li, M. J.; Lindeman, M. A.; Stahle, C. K.; Stahle, C. M.; Tralshawala, N.

2002-02-01

We present an overview of our efforts in fabricating Transition-Edge Sensor (TES) microcalorimeter arrays for use in astronomical x-ray spectroscopy. Two distinct types of array schemes are currently pursued: 5×5 single pixel TES array where each pixel is a TES microcalorimeter, and Position-Sensing TES (PoST) array. In the latter, a row of 7 or 15 thermally-linked absorber pixels is read out by two TES at its ends. Both schemes employ superconducting Mo/Au bilayers as the TES. The TES are placed on silicon nitride membranes for thermal isolation from the structural frame. The silicon nitride membranes are prepared by a Deep Reactive Ion Etch (DRIE) process into a silicon wafer. In order to achieve the concept of closely packed arrays without decreasing its structural and functional integrity, we have already developed the technology to fabricate arrays of cantilevered pixel-sized absorbers and slit membranes in silicon nitride films. Furthermore, we have started to investigate ultra-low resistance through-wafer micro-vias to bring the electrical contact out to the back of a wafer. .

Characterising the hydrothermal circulation patterns beneath thermal springs in the limestones of the Carboniferous Dublin Basin, Ireland: a geophysical and geochemical approach.

NASA Astrophysics Data System (ADS)

Blake, Sarah; Henry, Tiernan; Muller, Mark R.; Jones, Alan G.; Moore, John Paul; Murray, John; Campanyà, Joan; Vozár, Jan; Walsh, John; Rath, Volker

2016-04-01

A hydrogeological conceptual model of the sources, circulation pathways and temporal variations of two low-enthalpy thermal springs is derived from a multi-disciplinary approach. The springs are situated in the Carboniferous limestones of the Dublin Basin, in east-central Ireland. Kilbrook spring (Co. Kildare) has the highest recorded temperatures for any thermal spring in Ireland (maximum of 25.0 °C), and St. Gorman's Well (Co. Meath) has a complex and variable temperature profile (maximum of 21.8 °C). These temperatures are elevated with respect to average Irish groundwater temperatures (9.5 - 10.5 °C), and represent a geothermal energy potential, which is currently under evaluation. A multi-disciplinary investigation based upon audio-magnetotelluric (AMT) surveys, time-lapse temperature and chemistry measurements, and hydrochemical analysis, has been undertaken with the aims of investigating the provenance of the thermal groundwater and characterising the geological structures facilitating groundwater circulation in the bedrock. The hydrochemical analysis indicates that the thermal waters flow within the limestones of the Dublin Basin, and there is evidence that Kilbrook spring receives a contribution from deep-basinal fluids. The time-lapse temperature, electrical conductivity and water level records for St. Gorman's Well indicate a strongly non-linear response to recharge inputs to the system, suggestive of fluid flow in karst conduits. The 3-D electrical resistivity models of the subsurface revealed two types of geological structure beneath the springs; (1) Carboniferous normal faults, and (2) Cenozoic strike-slip faults. These structures are dissolutionally enhanced, particularly where they intersect. The karstification of these structures, which extend to depths of at least 500 m, has provided conduits that facilitate the operation of a relatively deep hydrothermal circulation pattern (likely estimated depths between 240 and 1,000 m) within the Dublin Basin. The results of this study support a hypothesis that the thermal maximum and simultaneous increased discharge observed each winter at both springs is the result of rapid infiltration, heating and re-circulation of meteoric waters within a structurally- and recharge-controlled hydrothermal circulation system.

Closing the Loop on Deep Brain Stimulation for Treatment-Resistant Depression.

PubMed

Widge, Alik S; Malone, Donald A; Dougherty, Darin D

2018-01-01

Major depressive episodes are the largest cause of psychiatric disability, and can often resist treatment with medication and psychotherapy. Advances in the understanding of the neural circuit basis of depression, combined with the success of deep brain stimulation (DBS) in movement disorders, spurred several groups to test DBS for treatment-resistant depression. Multiple brain sites have now been stimulated in open-label and blinded studies. Initial open-label results were dramatic, but follow-on controlled/blinded clinical trials produced inconsistent results, with both successes and failures to meet endpoints. Data from follow-on studies suggest that this is because DBS in these trials was not targeted to achieve physiologic responses. We review these results within a technology-lifecycle framework, in which these early trial "failures" are a natural consequence of over-enthusiasm for an immature technology. That framework predicts that from this "valley of disillusionment," DBS may be nearing a "slope of enlightenment." Specifically, by combining recent mechanistic insights and the maturing technology of brain-computer interfaces (BCI), the next generation of trials will be better able to target pathophysiology. Key to that will be the development of closed-loop systems that semi-autonomously alter stimulation strategies based on a patient's individual phenotype. Such next-generation DBS approaches hold great promise for improving psychiatric care.

Detecting deep divergence in seventeen populations of tea geometrid (Ectropis obliqua Prout) in China by COI mtDNA and cross-breeding.

PubMed

Zhang, Gui-Hua; Yuan, Zhi-Jun; Zhang, Chuan-Xi; Yin, Kun-Shan; Tang, Mei-Jun; Guo, Hua-Wei; Fu, Jian-Yu; Xiao, Qiang

2014-01-01

The tea geometrid (Ectropis obliqua Prout, Lepidoptera: Geometridae) is a dominant chewing insect endemic in most tea-growing areas in China. Recently some E. obliqua populations have been found to be resistant to the nucleopolyhedrovirus (EoNPV), a host-specific virus that has so far been found only in E. obliqua. Although the resistant populations are morphologically indistinguishable from susceptible populations, we conducted a nationwide collection and examined the genetic divergence in the COI region of the mtDNA in E. obliqua. Phylogenetic analyses of mtDNA in 17 populations revealed two divergent clades with genetic distance greater than 3.7% between clades and less than 0.7% within clades. Therefore, we suggest that E. obliqua falls into two distinct groups. Further inheritance analyses using reciprocal single-pair mating showed an abnormal F₁ generation with an unbalanced sex ratio and the inability to produce fertile eggs (or any eggs) through F1 self-crossing. These data revealed a potential cryptic species complex with deep divergence and reproductive isolation within E. obliqua. Uneven distribution of the groups suggests a possible geographic effect on the divergence. Future investigations will be conducted to examine whether EoNPV selection or other factors prompted the evolution of resistance.

Accurate lithography simulation model based on convolutional neural networks

NASA Astrophysics Data System (ADS)

Watanabe, Yuki; Kimura, Taiki; Matsunawa, Tetsuaki; Nojima, Shigeki

2017-07-01

Lithography simulation is an essential technique for today's semiconductor manufacturing process. In order to calculate an entire chip in realistic time, compact resist model is commonly used. The model is established for faster calculation. To have accurate compact resist model, it is necessary to fix a complicated non-linear model function. However, it is difficult to decide an appropriate function manually because there are many options. This paper proposes a new compact resist model using CNN (Convolutional Neural Networks) which is one of deep learning techniques. CNN model makes it possible to determine an appropriate model function and achieve accurate simulation. Experimental results show CNN model can reduce CD prediction errors by 70% compared with the conventional model.

Implication of Broadband Dispersion Measurements in Constraining Upper Mantle Velocity Structures

NASA Astrophysics Data System (ADS)

Kuponiyi, A.; Kao, H.; Cassidy, J. F.; Darbyshire, F. A.; Dosso, S. E.; Gosselin, J. M.; Spence, G.

2017-12-01

Dispersion measurements from earthquake (EQ) data are traditionally inverted to obtain 1-D shear-wave velocity models, which provide information on deep earth structures. However, in many cases, EQ-derived dispersion measurements lack short-period information, which theoretically should provide details of shallow structures. We show that in at least some cases short-period information, such as can be obtained from ambient seismic noise (ASN) processing, must be combined with EQ dispersion measurements to properly constrain deeper (e.g. upper-mantle) structures. To verify this, synthetic dispersion data are generated using hypothetical velocity models under four scenarios: EQ only (with and without deep low-velocity layers) and combined EQ and ASN data (with and without deep low-velocity layers). The now "broadband" dispersion data are inverted using a trans-dimensional Bayesian framework with the aim of recovering the initial velocity models and assessing uncertainties. Our results show that the deep low-velocity layer could only be recovered from the inversion of the combined ASN-EQ dispersion measurements. Given this result, we proceed to describe a method for obtaining reliable broadband dispersion measurements from both ASN and EQ and show examples for real data. The implication of this study in the characterization of lithospheric and upper mantle structures, such as the Lithosphere-Asthenosphere Boundary (LAB), is also discussed.

Genomic epidemiology of artemisinin resistant malaria

PubMed Central

2016-01-01

The current epidemic of artemisinin resistant Plasmodium falciparum in Southeast Asia is the result of a soft selective sweep involving at least 20 independent kelch13 mutations. In a large global survey, we find that kelch13 mutations which cause resistance in Southeast Asia are present at low frequency in Africa. We show that African kelch13 mutations have originated locally, and that kelch13 shows a normal variation pattern relative to other genes in Africa, whereas in Southeast Asia there is a great excess of non-synonymous mutations, many of which cause radical amino-acid changes. Thus, kelch13 is not currently undergoing strong selection in Africa, despite a deep reservoir of variations that could potentially allow resistance to emerge rapidly. The practical implications are that public health surveillance for artemisinin resistance should not rely on kelch13 data alone, and interventions to prevent resistance must account for local evolutionary conditions, shown by genomic epidemiology to differ greatly between geographical regions. DOI: http://dx.doi.org/10.7554/eLife.08714.001 PMID:26943619

Deep Molecular Diversity of Mammalian Synapses: Why It Matters and How to Measure It

PubMed Central

O’Rourke, Nancy A.; Weiler, Nick C.; Micheva, Kristina D.; Smith, Stephen J

2013-01-01

Summary Pioneering studies during the middle of the twentieth century revealed substantial diversity amongst mammalian chemical synapses and led to a widely accepted synapse type classification based on neurotransmitter molecule identity. Subsequently, powerful new physiological, genetic and structural methods have enabled the discovery of much deeper functional and molecular diversity within each traditional neurotransmitter type. Today, this deep diversity continues to pose both daunting challenges and exciting new opportunities for neuroscience. Our growing understanding of deep synapse diversity may transform how we think about and study neural circuit development, structure and function. PMID:22573027

Identification and characterization of Citrus tristeza virus isolates breaking resistance in trifoliate orange in California

USDA-ARS?s Scientific Manuscript database

Most Citrus tristeza virus (CTV) isolates in California are biologically mild and symptomless in commercial cultivars on CTV tolerant rootstocks. However, to better define California CTV isolates showing divergent serological and genetic profiles, selected isolates were subjected to deep sequencing ...

Main chemical species and molecular structure of deep eutectic solvent studied by experiments with DFT calculation: a case of choline chloride and magnesium chloride hexahydrate.

PubMed

Zhang, Chao; Jia, Yongzhong; Jing, Yan; Wang, Huaiyou; Hong, Kai

2014-08-01

The infrared spectrum of deep eutectic solvent of choline chloride and magnesium chloride hexahydrate was measured by the FTIR spectroscopy and analyzed with the aid of DFT calculations. The main chemical species and molecular structure in deep eutectic solvent of [MgClm(H2O)6-m]2-m and [ChxCly]x+y complexes were mainly identified and the active ion of magnesium complex during the electrochemical process was obtained. The mechanism of the electrochemical process of deep eutectic solvent of choline chloride and magnesium chloride hexahydrate was well explained by combination theoretical calculations and experimental. Besides, based on our results we proposed a new system for the dehydration study of magnesium chloride hexahydrate.

Holography as deep learning

NASA Astrophysics Data System (ADS)

Gan, Wen-Cong; Shu, Fu-Wen

Quantum many-body problem with exponentially large degrees of freedom can be reduced to a tractable computational form by neural network method [G. Carleo and M. Troyer, Science 355 (2017) 602, arXiv:1606.02318.] The power of deep neural network (DNN) based on deep learning is clarified by mapping it to renormalization group (RG), which may shed lights on holographic principle by identifying a sequence of RG transformations to the AdS geometry. In this paper, we show that any network which reflects RG process has intrinsic hyperbolic geometry, and discuss the structure of entanglement encoded in the graph of DNN. We find the entanglement structure of DNN is of Ryu-Takayanagi form. Based on these facts, we argue that the emergence of holographic gravitational theory is related to deep learning process of the quantum-field theory.

Testing the Structure of Hydrological Models using Genetic Programming

NASA Astrophysics Data System (ADS)

Selle, B.; Muttil, N.

2009-04-01

Genetic Programming is able to systematically explore many alternative model structures of different complexity from available input and response data. We hypothesised that genetic programming can be used to test the structure hydrological models and to identify dominant processes in hydrological systems. To test this, genetic programming was used to analyse a data set from a lysimeter experiment in southeastern Australia. The lysimeter experiment was conducted to quantify the deep percolation response under surface irrigated pasture to different soil types, water table depths and water ponding times during surface irrigation. Using genetic programming, a simple model of deep percolation was consistently evolved in multiple model runs. This simple and interpretable model confirmed the dominant process contributing to deep percolation represented in a conceptual model that was published earlier. Thus, this study shows that genetic programming can be used to evaluate the structure of hydrological models and to gain insight about the dominant processes in hydrological systems.

Two radars for AIM mission: A direct observation of the asteroid's structure from deep interior to regolith

NASA Astrophysics Data System (ADS)

Herique, A.; Ciarletti, V.

2015-10-01

Our knowledge of the internal structure of asteroids is, so far, indirect - relying entirely on inferences from remote sensing observations of the surface, and theoretical modeling. What are the bulk properties of the regolith and deep interior? And what are the physical processes that shape their internal structures? Direct measurements are needed to provide answers that will directly improve our ability to understand and model the mechanisms driving Near Earth Asteroids (NEA) for the benefit of science as well as for planetary defense or exploration. Radar tomography is the only technique to characterize internal structure from decimetric scale to global scale. This paper reviews the benefits of direct measurement of the asteroid interior. Then the radar concepts for both deep interior and shallow subsurface are presented and the radar payload proposed for the AIDA/AIM mission is outlined.

The T-Reflection and the deep crustal structure of the Vøring Margin offshore Mid-Norway

NASA Astrophysics Data System (ADS)

Abdelmalak, M. M.; Faleide, J. I.; Planke, S.; Gernigon, L.; Zastrozhnov, D.; Shephard, G. E.; Myklebust, R.

2017-12-01

Volcanic passive margins are characterized by massive occurrence of mafic extrusive and intrusive rocks, before and during plate breakup, playing major role in determining the evolution pattern and the deep structure of magma-rich margins. Deep seismic reflection data frequently provide imaging of strong continuous reflections in the middle/lower crust. In this context, we have completed a detailed 2D seismic interpretation of the deep crustal structure of the Vøring volcanic margin, offshore mid-Norway, where high-quality seismic data allow the identification of high-amplitude reflections, locally referred to as the T-Reflection (TR). Using the dense seismic grid we have mapped the top of the TR in order to compare it with filtered Bouguer gravity anomalies and seismic refraction data. The TR is identified between 7 and 10 s. Sometimes it consists of one single smooth reflection. However, it is frequently associated with a set of rough multiple reflections displaying discontinuous segments with varying geometries, amplitude and contact relationships. The TR seems to be connected to deep sill networks and locally located at the continuation of basement high structures or terminates over fractures and faults. The spatial correlation between the filtered positive Bouguer gravity anomalies and the TR indicates that the latter represents a high impedance boundary contrast associated with a high-density/velocity body. Within an uncertainty of ± 2.5 km, the depth of the mapped TR is found to correspond to the depth of the top of the Lower Crustal Body (LCB), characterized by high P-wave velocities (>7 km/s), in 50% of the outer Vøring Margin areas, whereas different depths between the TR and the top LCB are estimated for the remaining areas. We present a tectonic scenario, where a large part of the deep structure could be composed of preserved upper continental basement and middle to lower crustal lenses of inherited and intruded high-grade metamorphic rocks. Deep intrusions into the faulted crustal blocks are responsible for the rough character of the TR, whereas intrusions into the lower crust and detachment faults are likely responsible for its smoother appearance. Deep magma intrusions can be responsible for metamorphic processes leading to an increased velocity of the lower crust of more than 7 km/s.

Crustal structure of mountain belts and basins: Industry and academic collaboration at Cornell

DOE Office of Scientific and Technical Information (OSTI.GOV)

Allmendinger, R.; Barazangi, M.; Brown, L.

1995-08-01

Interdisciplinary investigations of the large-scale structure and evolution of key basins and orogenic belts around the world are the focal point of academic-industry interaction at Cornell. Ongoing and new initiatives with significant industry involvement include: Project INDEPTH (Interdisciplinary Deep Profiling of Tibet and the Himalayas), a multinational effort to delineate deep structure across the type example of active continent-continent collision. 300 km of deep reflection profiling was collected across the Himalaya: and southern Tibet Plateau in 1992 and 1994. CAP (Cornell Andes Project), a long-standing interdisciplinary effort to understand the structure and evolution of the Andes, with a focus onmore » Argentina, Chile and Bolivia. A deep reflection profile is tentatively planned for 1997. Intra-plate Orogeny in the Middle East and North Africa is the focus of multidisciplinary regional syntheses of existing seismic reflection and other databases in Syria (Palmyrides)and Morocco (Atlas), with an emphasis on reactivation and inversion tectonics. Project URSEIS (Urals Reflection Seismic Experiment and Integrated Studies) is a collaboration with EUROPROBE to collect 500 km of vibroseis and dynamite deep reflection profiling across the southern Urals in 1995. Project CRATON, an element in COCORP`s systematic exploration of the continental US, is a nascent multi-disciplinary effort to understand the buried craton of the central US and the basins built upon it. Global Basins Research Network (GBRN) is a diversified observational and computational effort to image and model the movement of pore fluids in detail and on a regional scale for a producing oil structure in the Gulf of Mexico.« less

Bioprospecting for Exopolysaccharides from Deep-Sea Hydrothermal Vent Bacteria: Relationship between Bacterial Diversity and Chemical Diversity

PubMed Central

Delbarre-Ladrat, Christine; Leyva Salas, Marcia; Zykwinska, Agata; Colliec-Jouault, Sylvia

2017-01-01

Many bacteria biosynthesize structurally diverse exopolysaccharides (EPS) and excrete them into their surrounding environment. The EPS functional features have found many applications in industries such as cosmetics and pharmaceutics. In particular, some EPS produced by marine bacteria are composed of uronic acids, neutral sugars, and N-acetylhexosamines, and may also bear some functional sulfate groups. This suggests that they can share common structural features with glycosaminoglycans (GAG) like the two EPS (HE800 and GY785) originating from the deep sea. In an attempt to discover new EPS that may be promising candidates as GAG-mimetics, fifty-one marine bacterial strains originating from deep-sea hydrothermal vents were screened. The analysis of the EPS chemical structure in relation to bacterial species showed that Vibrio, Alteromonas, and Pseudoalteromonas strains were the main producers. Moreover, they produced EPS with distinct structural features, which might be useful for targeting marine bacteria that could possibly produce structurally GAG-mimetic EPS. PMID:28930185

The immediate effects of deep breathing exercises on atelectasis and oxygenation after cardiac surgery.

PubMed

Westerdahl, Elisabeth; Lindmark, Birgitta; Eriksson, Tomas; Hedenstierna, Göran; Tenling, Arne

2003-12-01

Objective--To investigate the effects of deep breathing performed on the second postoperative day after coronary artery bypass graft surgery. Design--The immediate effects of 30 deep breaths performed without a mechanical device (n = 21), with a blow bottle device (n = 20) and with an inspiratory resistance-positive expiratory pressure mask (n = 20) were studied. Spiral computed tomography and arterial blood gas analyses were performed immediately before and after the intervention. Results--Deep breathing caused a significant decrease in atelectatic area from 12.3 +/- 7.3% to 10.2 +/- 6.7% (p < 0.0001) of total lung area 1 cm above the diaphragm and from 3.9 +/- 3.5% to 3.3 +/- 3.1% (p < 0.05) 5 cm above the diaphragm. No difference between the breathing techniques was found. The aerated lung area increased by 5% (p < 0.001). The PaO (2) increased by 0.2 kPa (p < 0.05), while PaCO (2) was unchanged in the three groups. Conclusion--A significant decrease of atelectatic area, increase in aerated lung area and a small increase in PaO (2) were found after performance of 30 deep breaths. No difference between the three breathing techniques was found.

Magnetotelluric characterization of the northern margin of the Yilgarn Craton (Western Australia)

NASA Astrophysics Data System (ADS)

Piña-Varas, Perla; Dentith, Michael

2017-04-01

The northern margin of the Yilgarn Craton (Western Australia) was deformed during the convergence and collision with the Pilbara Craton and the intervening Glenburgh Terrain that created the Capricorn Orogen. The Yilgarn Craton is one of the most intensively mineralised areas of continental crust with world class deposits of gold and nickel. However, the region to its north has surprisingly few deposits. Cratonic margins are considered to be key indicators of prospectivity at a regional scale. The northern limit of the Yilgarn Craton within the Capricorn Orogen is not well resolved at date because of overlying Proterozoic sedimentary basins. We present here some of the results of an extensive magnetotelluric (MT) study that is being performed in the area. This study is a component of large multi-disciplinary geoscience project on the 'Distal Footprints of Giant Ore Systems' in the Capricorn Orogen. The MT dataset consists of a total of 240 broadband magnetotelluric stations (BBMT) and 84 long period stations (LMT). Analysis of the dataset reveals a clear 3-D geoelectrical behaviour and extreme complexity for most of the sites, including an extremely high number of sites with phases out-of-quadrant at long periods. 3-D inverse modelling of the MT data shows high resistivity Archean units and low resistivity Paleoproterozoic basins, including very low resistivity structures at depth. These strong resistivity contrasts allow us to successfully map northern margin of the Yilgarn Craton beneath basin cover, as well as identifying major lateral conductivity changes in the deep crust suggestive of different tectonic blocks. Upper crustal conductive zones can be correlated with faults on seismic reflection data. Our results suggest MT surveys are a useful tool for regional-scale exploration in the study area and in area of thick cover in general.

Non-chemically amplified 248-nm resist materials

NASA Astrophysics Data System (ADS)

Willson, C. Grant; Yueh, Wang; Leeson, Michael J.; Steinhausler, Thomas; McAdams, Christopher L.; Dammel, Ralph R.; Sounik, James R.; Aslam, M.; Vicari, Richard; Sheehan, Michael

1997-07-01

Remarkable progress has been made in the formulation of chemically amplified resists for deep-UV (DUV or 248 nm) lithography. These materials are now in general use in full scale manufacturing. One of the deterrents to rapid and universal adoption of DUV lithography has been the combination of high cost of ownership and a narrow process latitude when compared to conventional i-line process alternatives. A significant part of the high cost of the DUV process is associated with installing and maintaining special air handling equipment that is required to remove basic contaminants from the ambient. Manufacture process latitude demands this special air handling. The chemically amplified resists were developed originally to support mercury lamp powered exposure systems. The sensitivity realized by chemical amplification is required to enable useful productivity with such systems that generate very little DUV flux at the wafer plane. With the advent of high powered excimer laser based illumination systems for 248 nm steppers and step-and-scan systems, it is appropriate to re-examine the applicability of non-chemically amplified DUV resist systems. These systems are less sensitive but have the potential to offer both lower cost of ownership and improved process latitude. A series of photoactive compounds (PACs) have been synthesized and auditioned for use in the formulation of a non-chemically amplified 248 nm resist. The most promising of these materials are analogs of 3-oxo-3-diazocoumarin. This chromophore displays photochemistry that is analogous to that of the diazonaphthoquinones (DNQ) that are the basis of i-line resist formulations, but it bleaches at 248 nm. Several structural analogs of the chromophore have been synthesized and a variety of ballast groups have been studied with the goal of enhancing the dissolution inhibition properties of the molecule. The diazocoumarin PACs have been formulated with customized phenolic resins that were designed to provide the combination of optical transparency, dry etch resistance and the dissolution characteristics that are required for manufacturing applications. The resins are copolymers of poly(4-hydroxystyrene) and blends of these polymers with novolac.

Semiconductor technology program. Progress briefs

NASA Technical Reports Server (NTRS)

Bullis, W. M. (Editor)

1979-01-01

The current status of NBS work on measurement technology for semiconductor materials, process control, and devices is reported. Results of both in-house and contract research are covered. Highlighted activities include modeling of diffusion processes, analysis of model spreading resistance data, and studies of resonance ionization spectroscopy, resistivity-dopant density relationships in p-type silicon, deep level measurements, photoresist sensitometry, random fault measurements, power MOSFET thermal characteristics, power transistor switching characteristics, and gross leak testing. New and selected on-going projects are described. Compilations of recent publications and publications in press are included.

Geophysical investigation of Red Devil mine using direct-current resistivity and electromagnetic induction, Red Devil, Alaska, August 2010

USGS Publications Warehouse

Burton, Bethany L.; Ball, Lyndsay B.

2011-01-01

Red Devil Mine, located in southwestern Alaska near the Village of Red Devil, was the state's largest producer of mercury and operated from 1933 to 1971. Throughout the lifespan of the mine, various generations of mills and retort buildings existed on both sides of Red Devil Creek, and the tailings and waste rock were deposited across the site. The mine was located on public Bureau of Land Management property, and the Bureau has begun site remediation by addressing mercury, arsenic, and antimony contamination caused by the minerals associated with the ore deposit (cinnabar, stibnite, realgar, and orpiment). In August 2010, the U.S. Geological Survey completed a geophysical survey at the site using direct-current resistivity and electromagnetic induction surface methods. Eight two-dimensional profiles and one three-dimensional grid of direct-current resistivity data as well as about 5.7 kilometers of electromagnetic induction profile data were acquired across the site. On the basis of the geophysical data and few available soil borings, there is not sufficient electrical or electromagnetic contrast to confidently distinguish between tailings, waste rock, and weathered bedrock. A water table is interpreted along the two-dimensional direct-current resistivity profiles based on correlation with monitoring well water levels and a relatively consistent decrease in resistivity typically at 2-6 meters depth. Three settling ponds used in the last few years of mine operation to capture silt and sand from a flotation ore processing technique possessed conductive values above the interpreted water level but more resistive values below the water level. The cause of the increased resistivity below the water table is unknown, but the increased resistivity may indicate that a secondary mechanism is affecting the resistivity structure under these ponds if the depth of the ponds is expected to extend below the water level. The electromagnetic induction data clearly identified the three monofills and indicate, in conjunction with the three-dimensional resistivity data, additional possible landfill features on the north side of Red Devil Creek. No obvious shallow feature was identified as a possible source for a spring that is feeding into Red Devil Creek from the north bank. However, a discrete, nearly vertical conductive feature observed on the direct-current resistivity line that passes within 5 meters of the spring may be worth investigating. Additional deep soil borings that better differentiate between tailings, waste rock, and weathered bedrock may be very useful in more confidently identifying these rock types in the direct-current resistivity data.

Deep learning for computational chemistry.

PubMed

Goh, Garrett B; Hodas, Nathan O; Vishnu, Abhinav

2017-06-15

The rise and fall of artificial neural networks is well documented in the scientific literature of both computer science and computational chemistry. Yet almost two decades later, we are now seeing a resurgence of interest in deep learning, a machine learning algorithm based on multilayer neural networks. Within the last few years, we have seen the transformative impact of deep learning in many domains, particularly in speech recognition and computer vision, to the extent that the majority of expert practitioners in those field are now regularly eschewing prior established models in favor of deep learning models. In this review, we provide an introductory overview into the theory of deep neural networks and their unique properties that distinguish them from traditional machine learning algorithms used in cheminformatics. By providing an overview of the variety of emerging applications of deep neural networks, we highlight its ubiquity and broad applicability to a wide range of challenges in the field, including quantitative structure activity relationship, virtual screening, protein structure prediction, quantum chemistry, materials design, and property prediction. In reviewing the performance of deep neural networks, we observed a consistent outperformance against non-neural networks state-of-the-art models across disparate research topics, and deep neural network-based models often exceeded the "glass ceiling" expectations of their respective tasks. Coupled with the maturity of GPU-accelerated computing for training deep neural networks and the exponential growth of chemical data on which to train these networks on, we anticipate that deep learning algorithms will be a valuable tool for computational chemistry. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Fabrication of comb-drive actuators for straining nanostructured suspended graphene.

PubMed

Goldsche, Matthias; Verbiest, G J; Khodkov, Tymofiy; Sonntag, Jens; von den Driesch, Nils; Buca, Dan; Stampfer, Christoph

2018-06-20

We report on the fabrication and characterization of an optimized comb-drive actuator design for strain-dependent transport measurements on suspended graphene. We fabricate devices from highly p-doped silicon using deep reactive ion etching with a chromium mask. Crucially, we implement a gold layer to reduce the device resistance from ≈51.6 kΩ to ≈236 Ω at room temperature in order to allow for strain-dependent transport measurements. The graphene is integrated by mechanically transferring it directly onto the actuator using a polymethylmethacrylate membrane. Importantly, the integrated graphene can be nanostructured afterwards to optimize device functionality. The minimum feature size of the structured suspended graphene is 30~nm, which allows for interesting device concepts such as mechanically-tunable nanoconstrictions. Finally, we characterize the fabricated devices by measuring the Raman spectrum as well as the a mechanical resonance frequency of an integrated graphene sheet for different strain values. © 2018 IOP Publishing Ltd.

Cancer in light of experimental evolution.

PubMed

Sprouffske, Kathleen; Merlo, Lauren M F; Gerrish, Philip J; Maley, Carlo C; Sniegowski, Paul D

2012-09-11

Cancer initiation, progression, and the emergence of therapeutic resistance are evolutionary phenomena of clonal somatic cell populations. Studies in microbial experimental evolution and the theoretical work inspired by such studies are yielding deep insights into the evolutionary dynamics of clonal populations, yet there has been little explicit consideration of the relevance of this rapidly growing field to cancer biology. Here, we examine how the understanding of mutation, selection, and spatial structure in clonal populations that is emerging from experimental evolution may be applicable to cancer. Along the way, we discuss some significant ways in which cancer differs from the model systems used in experimental evolution. Despite these differences, we argue that enhanced prediction and control of cancer may be possible using ideas developed in the context of experimental evolution, and we point out some prospects for future research at the interface between these traditionally separate areas. Copyright © 2012 Elsevier Ltd. All rights reserved.

The S-layer Protein DR_2577 Binds Deinoxanthin and under Desiccation Conditions Protects against UV-Radiation in Deinococcus radiodurans

PubMed Central

Farci, Domenica; Slavov, Chavdar; Tramontano, Enzo; Piano, Dario

2016-01-01

Deinococcus radiodurans has the puzzling ability to withstand over a broad range of extreme conditions including high doses of ultraviolet radiation and deep desiccation. This bacterium is surrounded by a surface layer (S-layer) built of a regular repetition of several proteins, assembled to form a paracrystalline structure. Here we report that the deletion of a main constituent of this S-layer, the gene DR_2577, causes a decrease in the UVC resistance, especially in desiccated cells. Moreover, we show that the DR_2577 protein binds the carotenoid deinoxanthin, a strong protective antioxidant specific of this bacterium. A further spectroscopical characterization of the deinoxanthin-DR_2577 complex revealed features which could suggest a protective role of DR_2577. We propose that, especially under desiccation, the S-layer shields the bacterium from incident ultraviolet light and could behave as a first lane of defense against UV radiation. PMID:26909071

The S-layer Protein DR_2577 Binds Deinoxanthin and under Desiccation Conditions Protects against UV-Radiation in Deinococcus radiodurans.

PubMed

Farci, Domenica; Slavov, Chavdar; Tramontano, Enzo; Piano, Dario

2016-01-01

Deinococcus radiodurans has the puzzling ability to withstand over a broad range of extreme conditions including high doses of ultraviolet radiation and deep desiccation. This bacterium is surrounded by a surface layer (S-layer) built of a regular repetition of several proteins, assembled to form a paracrystalline structure. Here we report that the deletion of a main constituent of this S-layer, the gene DR_2577, causes a decrease in the UVC resistance, especially in desiccated cells. Moreover, we show that the DR_2577 protein binds the carotenoid deinoxanthin, a strong protective antioxidant specific of this bacterium. A further spectroscopical characterization of the deinoxanthin-DR_2577 complex revealed features which could suggest a protective role of DR_2577. We propose that, especially under desiccation, the S-layer shields the bacterium from incident ultraviolet light and could behave as a first lane of defense against UV radiation.

Modulation of the electrical properties in amorphous indium-gallium zinc-oxide semiconductor films using hydrogen incorporation

NASA Astrophysics Data System (ADS)

Song, Aeran; Park, Hyun-Woo; Chung, Kwun-Bum; Rim, You Seung; Son, Kyoung Seok; Lim, Jun Hyung; Chu, Hye Yong

2017-12-01

The electrical properties of amorphous-indium-gallium-zinc-oxide (a-IGZO) thin films were investigated after thermal annealing and plasma treatment under different gas conditions. The electrical resistivity of a-IGZO thin films post-treated in a hydrogen ambient were lower than those without treatment and those annealed in air, regardless of the methods used for both thermal annealing and plasma treatment. The electrical properties can be explained by the quantity of hydrogen incorporated into the samples and the changes in the electronic structure in terms of the chemical bonding states, the distribution of the near-conduction-band unoccupied states, and the band alignment. As a result, the carrier concentrations of the hydrogen treated a-IGZO thin films increased, while the mobility decreased, due to the increase in the oxygen vacancies from the occurrence of unoccupied states in both shallow and deep levels.

Sb2O3/Ag/Sb2O3 Multilayer Transparent Conducting Films For Ultraviolet Organic Light-emitting Diode

NASA Astrophysics Data System (ADS)

Song, Chunyan; Zhang, Nan; Lin, Jie; Guo, Xiaoyang; Liu, Xingyuan

2017-01-01

A novel UV transparent conducting films based on Sb2O3/Ag/Sb2O3 (SAS) structure, which were prepared by an electron-beam thermal evaporation at room temperature. This SAS exhibits excellent electrical, optical and stable properties. Especially for UV region, the SAS has high transmittance of 80% at 306 nm and 92% at 335 nm, meanwhile achieving low sheet resistance ( ≤ 10 Ω sq-1). The UV OLED based on the SAS show competitive device performance. The UV OLED obtains the peak of UV electroluminescence at 376 nm and shows a very high maximum EQE of 4.1% with the maximum output power density of 5.18 mW cm-2. These results indicate that the potential of SAS applications in deep UV transparent electrodes and large-scale flexible transparent electronics.

Sb2O3/Ag/Sb2O3 Multilayer Transparent Conducting Films For Ultraviolet Organic Light-emitting Diode.

PubMed

Song, Chunyan; Zhang, Nan; Lin, Jie; Guo, Xiaoyang; Liu, Xingyuan

2017-01-25

A novel UV transparent conducting films based on Sb 2 O 3 /Ag/Sb 2 O 3 (SAS) structure, which were prepared by an electron-beam thermal evaporation at room temperature. This SAS exhibits excellent electrical, optical and stable properties. Especially for UV region, the SAS has high transmittance of 80% at 306 nm and 92% at 335 nm, meanwhile achieving low sheet resistance ( ≤ 10 Ω sq -1 ). The UV OLED based on the SAS show competitive device performance. The UV OLED obtains the peak of UV electroluminescence at 376 nm and shows a very high maximum EQE of 4.1% with the maximum output power density of 5.18 mW cm -2 . These results indicate that the potential of SAS applications in deep UV transparent electrodes and large-scale flexible transparent electronics.

Sb2O3/Ag/Sb2O3 Multilayer Transparent Conducting Films For Ultraviolet Organic Light-emitting Diode

PubMed Central

Song, Chunyan; Zhang, Nan; Lin, Jie; Guo, Xiaoyang; Liu, Xingyuan

2017-01-01

A novel UV transparent conducting films based on Sb2O3/Ag/Sb2O3 (SAS) structure, which were prepared by an electron-beam thermal evaporation at room temperature. This SAS exhibits excellent electrical, optical and stable properties. Especially for UV region, the SAS has high transmittance of 80% at 306 nm and 92% at 335 nm, meanwhile achieving low sheet resistance ( ≤ 10 Ω sq−1). The UV OLED based on the SAS show competitive device performance. The UV OLED obtains the peak of UV electroluminescence at 376 nm and shows a very high maximum EQE of 4.1% with the maximum output power density of 5.18 mW cm−2. These results indicate that the potential of SAS applications in deep UV transparent electrodes and large-scale flexible transparent electronics. PMID:28120888

Cryogenic Etching of Silicon: An Alternative Method For Fabrication of Vertical Microcantilever Master Molds

PubMed Central

Addae-Mensah, Kweku A.; Retterer, Scott; Opalenik, Susan R.; Thomas, Darrell; Lavrik, Nickolay V.; Wikswo, John P.

2013-01-01

This paper examines the use of deep reactive ion etching (DRIE) of silicon with fluorine high-density plasmas at cryogenic temperatures to produce silicon master molds for vertical microcantilever arrays used for controlling substrate stiffness for culturing living cells. The resultant profiles achieved depend on the rate of deposition and etching of a SiOxFy polymer, which serves as a passivation layer on the sidewalls of the etched structures in relation to areas that have not been passivated with the polymer. We look at how optimal tuning of two parameters, the O2 flow rate and the capacitively coupled plasma (CCP) power, determine the etch profile. All other pertinent parameters are kept constant. We examine the etch profiles produced using e-beam resist as the main etch mask, with holes having diameters of 750 nm, 1 µm, and 2 µm. PMID:24223478

Ultralow dose effects in ion-beam induced grafting of polymethylmethacrylate (PMMA)

NASA Astrophysics Data System (ADS)

Corelli, J. C.; Steckl, A. J.; Pulver, D.; Randall, J. N.

We have investigated the process of image enhancement in high resolution lithography through polymer grafting techniques. Sensitivity gains of 10 3-10 4 were obtained for H +, X-ray, e-beam and deep-UV irradiations. Ultralow dose effects in 60 keV H + irradiated PMMA have been observed through the use of the acrylic acid (AA) monomer grafting with irradiated PMMA. At conventional doses of 10 10 cm -2 an inner structure of each feature is revealed. At doses of (1-2) X 10 9 cm -2, discrete events within the exposed regions are observable. This is the first time that individual events have been observable in a lithography process and sets the upper limit in the useful sensitivity of the resist and ion lithography process. This effect is directly observable only with ions, because of their higher efficiency per particle than either photons or electrons.

Spectral investigation of somatotropin for different pH values

NASA Astrophysics Data System (ADS)

Otero de Joshi, Virginia; Gil, Herminia; Contreras, Silvia; Joshi, Narahari V.; Hernandez, Luis

1996-04-01

Spectral investigations of absorbance in deep ultra-violet region (from 200 nm to 350 nm) of (STM) was carried out for different pH values. On the high energy side the peak is located at 195 nm which is generally attributed to peptide bonds. This peak, as expected, does not show any shift with pH value (4.3 to 10.8). A rather broad peak is spread in the region from 200 nm to 240 nm which could be the superposition of the peaks corresponding to the absorption due to (alpha) helix and (beta) structure. This peak shows a red shift as pH value increases. The same hormone was glycated by a conventional method and the process was estimated with the absorption spectra. The results are discussed in the light of nonenzymatic glycation. It was found that glycation mucus somatotropin resistant towards the denaturation process.

Cancer in Light of Experimental Evolution

PubMed Central

Sprouffske, Kathleen; Merlo, Lauren M.F.; Gerrish, Philip J.; Maley, Carlo C.; Sniegowski, Paul D.

2012-01-01

Cancer initiation, progression, and the emergence of therapeutic resistance are evolutionary phenomena of clonal somatic cell populations. Studies in microbial experimental evolution and the theoretical work inspired by such studies are yielding deep insights into the evolutionary dynamics of clonal populations, yet there has been little explicit consideration of the relevance of this rapidly growing field to cancer biology. Here, we examine how the understanding of mutation, selection, and spatial structure in clonal populations that is emerging from experimental evolution may be applicable to cancer. Along the way, we discuss some significant ways in which cancer differs from the model systems used in experimental evolution. Despite these differences, we argue that enhanced prediction and control of cancer may be possible using ideas developed in the context of experimental evolution, and we point out some prospects for future research at the interface between these traditionally separate areas. PMID:22975007

Pediatric air gun shot injury.

PubMed

Khan, Ubaid U; Kamal, Naglaa M; Mirza, Shazia J; Sherief, Laila M

2014-12-01

Air guns (AGs) use air or another compressed gas to propel a projectile. Different injuries may occur in children due to their body structure, which is less-resistant with thin soft tissue coverage that can be easily penetrated by an AG shot. We present 3 cases of pediatric AG shot injury. The first-case had right lumber deep tissue penetration of AG pallet without internal damage, the second-case had a complex course of pellet into the perineum, and the third-case was shot in the left shoulder. All cases were accidentally shot. The shooters were all children, and relatives of the victims. All patients were generally stable on arrival. Two cases were operated, and one received conservative management. On follow up, no complications were noted.  At first sight, AGs and air rifles may appear relatively harmless, but they are potentially lethal and children should not be allowed to play with them. 

Genomic analysis of local variation and recent evolution in Plasmodium vivax

PubMed Central

Pearson, Richard D; Miotto, Olivo; Almagro-Garcia, Jacob; Amaratunga, Chanaki; Suon, Seila; Mao, Sivanna; Noviyanti, Rintis; Trimarsanto, Hidayat; Marfurt, Jutta; Anstey, Nicholas M; William, Timothy; Boni, Maciej F; Dolecek, Christiane; Hien, Tinh Tran; White, Nicholas J; Michon, Pascal; Siba, Peter; Tavul, Livingstone; Harrison, Gabrielle; Barry, Alyssa; Mueller, Ivo; Ferreira, Marcelo U; Karunaweera, Nadira; Randrianarivelojosia, Milijaona; Gao, Qi; Hubbart, Christina; Hart, Lee; Jeffery, Ben; Drury, Eleanor; Mead, Daniel; Kekre, Mihir; Campino, Susana; Manske, Magnus; Cornelius, Victoria J; MacInnis, Bronwyn; Rockett, Kirk A; Miles, Alistair; Rayner, Julian C; Fairhurst, Rick M; Nosten, Francois; Price, Ric N; Kwiatkowski, Dominic P

2016-01-01

The widespread distribution and relapsing nature of Plasmodium vivax infection present major challenges for malaria elimination. To characterise the genetic diversity of this parasite within individual infections and across the population, we performed deep genome sequencing of >200 clinical samples collected across the Asia-Pacific region, and analysed data on >300,000 SNPs and 9 regions of the genome with large copy number variations. Individual infections showed complex patterns of genetic structure, with variation not only in the number of dominant clones but also in their level of relatedness and inbreeding. At the population level, we observed strong signals of recent evolutionary selection both in known drug resistance genes and at novel loci, and these varied markedly between geographical locations. These findings reveal a dynamic landscape of local evolutionary adaptation in P. vivax populations, and provide a foundation for genomic surveillance to guide effective strategies for control and elimination. PMID:27348299

Molecular dynamics simulations of the Nip7 proteins from the marine deep- and shallow-water Pyrococcus species.

PubMed

Medvedev, Kirill E; Alemasov, Nikolay A; Vorobjev, Yuri N; Boldyreva, Elena V; Kolchanov, Nikolay A; Afonnikov, Dmitry A

2014-10-15

The identification of the mechanisms of adaptation of protein structures to extreme environmental conditions is a challenging task of structural biology. We performed molecular dynamics (MD) simulations of the Nip7 protein involved in RNA processing from the shallow-water (P. furiosus) and the deep-water (P. abyssi) marine hyperthermophylic archaea at different temperatures (300 and 373 K) and pressures (0.1, 50 and 100 MPa). The aim was to disclose similarities and differences between the deep- and shallow-sea protein models at different temperatures and pressures. The current results demonstrate that the 3D models of the two proteins at all the examined values of pressures and temperatures are compact, stable and similar to the known crystal structure of the P. abyssi Nip7. The structural deviations and fluctuations in the polypeptide chain during the MD simulations were the most pronounced in the loop regions, their magnitude being larger for the C-terminal domain in both proteins. A number of highly mobile segments the protein globule presumably involved in protein-protein interactions were identified. Regions of the polypeptide chain with significant difference in conformational dynamics between the deep- and shallow-water proteins were identified. The results of our analysis demonstrated that in the examined ranges of temperatures and pressures, increase in temperature has a stronger effect on change in the dynamic properties of the protein globule than the increase in pressure. The conformational changes of both the deep- and shallow-sea protein models under increasing temperature and pressure are non-uniform. Our current results indicate that amino acid substitutions between shallow- and deep-water proteins only slightly affect overall stability of two proteins. Rather, they may affect the interactions of the Nip7 protein with its protein or RNA partners.

3D modeling of magnetotelluric data unraveling the tectonic setting and sources of magmatism in the northeastern corner of Borborema Province, NE Brazil

NASA Astrophysics Data System (ADS)

Padilha, A. L.; Vitorello, I.; Padua, M. B.; Batista, J. C.; Fuck, R. A.

2017-12-01

The Borborema Province in northeast Brazil is a complex orogenic system formed by crustal blocks of different ages, origin and evolution amalgamated during the West Gondwana convergence in late Neoproterozoic-early Phanerozoic Brasiliano Orogeny. We discuss here new magnetotelluric (MT) data collected along four linear profiles crisscrossing the northeastern corner of the province to assess its deep electrical resistivity structure. Dimensionality analysis showed that a 3D electrical structure predominates in the subsurface and thus the data were modeled by a 3D MT data inversion scheme. The modeling revealed several subvertical discontinuities, with significant lateral contrast in the overall geoelectric structure, down to upper mantle depths. A major conductivity anomaly is registered in the crust beneath Neoproterozoic supracrustal rocks (Serido Group) and this anomaly deepens to upper mantle depths in the northwest direction below a zone of Paleoproterozoic plutons (Caico Complex). It has been suggested that the Serido Group was originally initiated as a sedimentary basin developed upon a Paleoproterozoic basement during a Neoproterozoic extension event related to a collisional foredeep of a south-dipping subduction slab, contrary to our northwest-dipping conductivity vergence. In case of the Caico Complex, because of the petrogenesis of its orthogneisses that indicates partial melting of a metasomatically enriched spinel-to garnet-bearing lherzolite with adakitic features, we also propose a subduction zone environment for its original magmatism. Considering the tenuous evidence indicating that this conductive anomaly could extend down into the upper mantle in the same region where teleseismic tomography register an attenuation of P waves, it can be concluded that this zone could also be the source of the metasomatic fluids and minerals observed along north-south Mesozoic volcanic plugs and flows of alkaline rocks and alkali basalts (Macau-Queimadas belt). In contrast to the general pattern in several parts of the province exhibiting a multitude of resistive and conductive zones marking the crust and upper mantle, an elongated resistive cratonic-like keel in the WSW-ENE direction is observed along the southeastern side of the study area.

Deep and Structured Robust Information Theoretic Learning for Image Analysis.

PubMed

Deng, Yue; Bao, Feng; Deng, Xuesong; Wang, Ruiping; Kong, Youyong; Dai, Qionghai

2016-07-07

This paper presents a robust information theoretic (RIT) model to reduce the uncertainties, i.e. missing and noisy labels, in general discriminative data representation tasks. The fundamental pursuit of our model is to simultaneously learn a transformation function and a discriminative classifier that maximize the mutual information of data and their labels in the latent space. In this general paradigm, we respectively discuss three types of the RIT implementations with linear subspace embedding, deep transformation and structured sparse learning. In practice, the RIT and deep RIT are exploited to solve the image categorization task whose performances will be verified on various benchmark datasets. The structured sparse RIT is further applied to a medical image analysis task for brain MRI segmentation that allows group-level feature selections on the brain tissues.

A modified resistance equation for modeling underwater spark discharge with salinity and high pressure conditions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhao, Pengfei; Roy, Subrata, E-mail: roy@ufl.edu

2014-05-07

This work investigates the performance of underwater spark discharge relating to bubble growth and decay under high pressure and with salinity conditions by introducing a modified form of the resistance equation. Here, we study salinity influence on circuit parameters by fitting the experimental data for which gap resistance is much larger in conductive water than in dielectric water. Accordingly, the resistance equation is modified by considering the influence of both plasma and its surrounding liquid. Thermal radiation effect of the bubble is also studied by comparing two different radiation models. Numerical results predict a larger bubble pressure for saline watermore » but a reduced size and a smaller bubble cycle at a greater water depth. Such study may be useful in many saltwater applications, including that for deep sea conditions.« less

Postexposure bake characteristics of a chemically amplified deep-ultraviolet resist

NASA Astrophysics Data System (ADS)

Sturtevant, John L.; Holmes, Steven J.; Rabidoux, Paul A.

1992-06-01

In the processing of chemically amplified resist systems, two `dose' parameters must be considered. The exposure dose dictates the amount of photoacid generated, and the thermal dose that is administered during the post-exposure bake (PEB) governs the extent to which the resin is chemically transformed by the acid. An Arrhenius relationship exists between these two dose variables, and the magnitude of the effective activation energy determines the degree of PEB temperature control required for a particular linewidth budget. PEB characteristics are presented for a chemically amplified positive-tone DUV resist used by IBM in the manufacture of 0.5 micrometers 16 Mb DRAMs. The effect of PEB temperature and time on resist sensitivity, contrast, resolution, and process latitude is presented. The influence of exposure and thermal dose on the chemical contamination effect is also discussed.

Modeling language and cognition with deep unsupervised learning: a tutorial overview

PubMed Central

Zorzi, Marco; Testolin, Alberto; Stoianov, Ivilin P.

2013-01-01

Deep unsupervised learning in stochastic recurrent neural networks with many layers of hidden units is a recent breakthrough in neural computation research. These networks build a hierarchy of progressively more complex distributed representations of the sensory data by fitting a hierarchical generative model. In this article we discuss the theoretical foundations of this approach and we review key issues related to training, testing and analysis of deep networks for modeling language and cognitive processing. The classic letter and word perception problem of McClelland and Rumelhart (1981) is used as a tutorial example to illustrate how structured and abstract representations may emerge from deep generative learning. We argue that the focus on deep architectures and generative (rather than discriminative) learning represents a crucial step forward for the connectionist modeling enterprise, because it offers a more plausible model of cortical learning as well as a way to bridge the gap between emergentist connectionist models and structured Bayesian models of cognition. PMID:23970869

Modeling language and cognition with deep unsupervised learning: a tutorial overview.

PubMed

Zorzi, Marco; Testolin, Alberto; Stoianov, Ivilin P

2013-01-01

Deep unsupervised learning in stochastic recurrent neural networks with many layers of hidden units is a recent breakthrough in neural computation research. These networks build a hierarchy of progressively more complex distributed representations of the sensory data by fitting a hierarchical generative model. In this article we discuss the theoretical foundations of this approach and we review key issues related to training, testing and analysis of deep networks for modeling language and cognitive processing. The classic letter and word perception problem of McClelland and Rumelhart (1981) is used as a tutorial example to illustrate how structured and abstract representations may emerge from deep generative learning. We argue that the focus on deep architectures and generative (rather than discriminative) learning represents a crucial step forward for the connectionist modeling enterprise, because it offers a more plausible model of cortical learning as well as a way to bridge the gap between emergentist connectionist models and structured Bayesian models of cognition.

Pile/shaft designs using artificial neural networks (i.e., genetic programming) with spatial variability considerations.

DOT National Transportation Integrated Search

2014-03-01

The work focused on the improvement of FB-DEEPs prediction of skin and tip resistance of concrete : piles and drilled shafts in Florida. For the work, data from 19 concrete pile sites and 18 drilled shaft sites were : collected. This included 458 ...

Montessori Education: An Idea Whose Time Has Come?

ERIC Educational Resources Information Center

Torrence, Martha

2012-01-01

Educational institutions change slowly, and sometimes superficially at best. Large public (and sometimes smaller private) systems can be highly resistant to deep change. Schools are notorious for rearranging the desk chairs for a while, then reverting back to something very close to the original design. Even the most well-intentioned of…

Using Depth Intuition in Creative Problem Solving and Strategic Innovation.

ERIC Educational Resources Information Center

Markley, O. W.

1988-01-01

The article describes four step-by-step methods to sharpen intuitive capacities for problem-solving and innovation. Visionary and transpersonal knowledge processes are tapped to gain access to relatively deep levels of intuition. The methods are considered useful for overcoming internal blockages or resistance, developing organizational mission…

Prosody and Formulaic Language in Treatment-Resistant Depression: Effects of Deep Brain Stimulation

ERIC Educational Resources Information Center

Bridges, Kelly A.

2014-01-01

Communication, specifically the elements crucial for normal social interaction, can be significantly affected in psychiatric illness, especially depression. Of specific importance are prosody (an aspect of speech that carries emotional valence) and formulaic language (non-novel linguistic segments that are prevalent in naturalistic conversation).…

Discovery of Pod Shatter-Resistant Associated SNPs by Deep Sequencing of a Representative Library Followed by Bulk Segregant Analysis in Rapeseed

PubMed Central

Huang, Shunmou; Yang, Hongli; Zhan, Gaomiao; Wang, Xinfa; Liu, Guihua; Wang, Hanzhong

2012-01-01

Background Single nucleotide polymorphisms (SNPs) are an important class of genetic marker for target gene mapping. As of yet, there is no rapid and effective method to identify SNPs linked with agronomic traits in rapeseed and other crop species. Methodology/Principal Findings We demonstrate a novel method for identifying SNP markers in rapeseed by deep sequencing a representative library and performing bulk segregant analysis. With this method, SNPs associated with rapeseed pod shatter-resistance were discovered. Firstly, a reduced representation of the rapeseed genome was used. Genomic fragments ranging from 450–550 bp were prepared from the susceptible bulk (ten F2 plants with the silique shattering resistance index, SSRI <0.10) and the resistance bulk (ten F2 plants with SSRI >0.90), and also Solexa sequencing-produced 90 bp reads. Approximately 50 million of these sequence reads were assembled into contigs to a depth of 20-fold coverage. Secondly, 60,396 ‘simple SNPs’ were identified, and the statistical significance was evaluated using Fisher's exact test. There were 70 associated SNPs whose –log10 p value over 16 were selected to be further analyzed. The distribution of these SNPs appeared a tight cluster, which consisted of 14 associated SNPs within a 396 kb region on chromosome A09. Our evidence indicates that this region contains a major quantitative trait locus (QTL). Finally, two associated SNPs from this region were mapped on a major QTL region. Conclusions/Significance 70 associated SNPs were discovered and a major QTL for rapeseed pod shatter-resistance was found on chromosome A09 using our novel method. The associated SNP markers were used for mapping of the QTL, and may be useful for improving pod shatter-resistance in rapeseed through marker-assisted selection and map-based cloning. This approach will accelerate the discovery of major QTLs and the cloning of functional genes for important agronomic traits in rapeseed and other crop species. PMID:22529909

Occurrence of oil in the Austin Chalk at Van field, Van Zandt County, Texas: A unique geologic setting

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lowe, J.T.; Carrington, D.B.

1990-09-01

The Austin Chalk is buried to a depth of only 2,100-2,500 ft and has retained primary microporosity unlike the typical deep fractured chalk reservoirs. The Van structure is a complexly faulted domal anticline created by salt intrusion and is approximately 2,000 ft higher than surrounding structures in the area. A major northwest-dipping fault acts as the primary trapping mechanism. The field has produced 0.5 billion BO from thick Woodbine sands since its discovery in 1929. Occurrence of oil in the Austin Chalk has been known since the field discovery, but prior completions were low rate oil producers. Recent development ofmore » a large fracture stimulation technique has resulted in increased production rates of up to 300 BOPD. The Austin Chalk reservoir limits were determined by isopaching feet of minimum productive resistivity having porosity above a cutoff value. The resistivity/porosity isopach showed a direct correlation between Austin Chalk productivity and the Austin Chalk structure and faulting pattern. Structural evidence along with oil typing indicate that the oil in the Austin Chalk has migrated upward along fault planes and through fault juxtaposition from the Woodbine sands 200 ft below the Austin Chalk. Thin-section and scanning electron microscopy work performed on conventional cores showed that the Van Austin Chalk formation is a very fine grained limestone composed primarily of coccoliths. Various amounts of detrital illite clay are present in the coccolith matrix. All effective porosity is micro-intergranular and ranges from 15 to 35%. Based on the core analyses, the main porosity reducing agent and therefore control on reservoir quality is the amount of detrital clay present filling the micropores. Permeability is very low with values ranging from 0.01 to 1.5 md. There is no evidence of significant natural fractures in the core. Artificial fractures are therefore required to create the permeability needed to sustain commercial production rates.« less

Flame-Resistant Composite Materials For Structural Members

NASA Technical Reports Server (NTRS)

Spears, Richard K.

1995-01-01

Matrix-fiber composite materials developed for structural members occasionally exposed to hot, corrosive gases. Integral ceramic fabric surface layer essential for resistance to flames and chemicals. Endures high temperature, impedes flame from penetrating to interior, inhibits diffusion of oxygen to interior where it degrades matrix resin, resists attack by chemicals, helps resist erosion, and provides additional strength. In original intended application, composite members replace steel structural members of rocket-launching structures that deteriorate under combined influences of atmosphere, spilled propellants, and rocket exhaust. Composites also attractive for other applications in which corrosion- and fire-resistant structural members needed.

Evolution of Structural and Electrical Properties of Oxygen-Deficient VO2 under Low Temperature Heating Process.

PubMed

Zhang, Jiasong; Zhao, Zhengjing; Li, Jingbo; Jin, Haibo; Rehman, Fida; Chen, Pengwan; Jiang, Yijie; Chen, Chunxu; Cao, Maosheng; Zhao, Yongjie

2017-08-16

Structural stability and functional performances of vanadium dioxide (VO 2 ) are strongly influenced by oxygen vacancies. However, the mechanism of metal-insulator transition (MIT) influenced by defects is still under debate. Here, we study the evolution of structure and electrical property of oxygen-deficient VO 2 by a low temperature annealing process (LTP) based on a truss-structured VO 2 nanonet. The oxygenation process of the oxygen-deficient VO 2 is greatly prolonged, which enables us to probe the gradual change of properties of the oxygen-deficient VO 2 . A continuous lattice reduction is observed during LTP. No recrystallization and structural collapse of the VO 2 nanonet can be found after LTP. The valence-band X-ray photoelectron spectroscopy (XPS) measurements indicate that the oxygen deficiency strongly affects the energy level of the valence band edge. Correspondingly, the resistance changes of the VO 2 films from 1 to 4.5 orders of magnitude are achieved by LTP. The effect of oxygen vacancy on the electric field driven MIT is investigated. The threshold value of voltage triggering the MIT decreases with increasing the oxygen vacancy concentration. This work demonstrates a novel and effective way to control the content of oxygen vacancies in VO 2 and the obvious impact of oxygen vacancy on MIT, facilitating further research on the role of oxygen vacancy in structure and MIT of VO 2 , which is important for the deep understanding of MIT and exploiting innovative functional application of VO 2 .

Structures of Xishan village landslide in Li County, Sichuan, China, inferred from high-frequency receiver functions of local earthquakes

NASA Astrophysics Data System (ADS)

Wei, Z.; Chu, R.

2017-12-01

Teleseismic receiver function methods are widely used to study the deep structural information beneath the seismic station. However, teleseismic waveforms are difficult to extract the high-frequency receiver function, which are insufficient to constrain the shallow structure because of the inelastic attenuation effect of the earth. In this study, using the local earthquake waveforms collected from 3 broadband stations deployed on the Xishan village landslide in Li County in Sichuan Province, we used the high-frequency receiver function method to study the shallow structure beneath the landslide. We developed the Vp-k (Vp/Vs) staking method of receiver functions, and combined with the H-k stacking and waveform inversion methods of receiver functions to invert the landslide's thickness, S-wave velocity and average Vp/Vs ratio beneath these stations, and compared the thickness with the borehole results. Our results show small-scale lateral variety of velocity structure, a 78-143m/s lower S-wave velocity in the bottom layer and 2.4-3.1 Vp/Vs ratio in the landslide. The observed high Vp/Vs ratio and low S-wave velocity in the bottom layer of the landslide are consistent with low electrical resistivity and water-rich in the bottom layer, suggesting a weak shear strength and potential danger zone in landslide h1. Our study suggest that the local earthquake receiver function can obtain the shallow velocity structural information and supply some seismic constrains for the landslide catastrophe mitigation.

Combining functional and structural genomics to sample the essential Burkholderia structome.

PubMed

Baugh, Loren; Gallagher, Larry A; Patrapuvich, Rapatbhorn; Clifton, Matthew C; Gardberg, Anna S; Edwards, Thomas E; Armour, Brianna; Begley, Darren W; Dieterich, Shellie H; Dranow, David M; Abendroth, Jan; Fairman, James W; Fox, David; Staker, Bart L; Phan, Isabelle; Gillespie, Angela; Choi, Ryan; Nakazawa-Hewitt, Steve; Nguyen, Mary Trang; Napuli, Alberto; Barrett, Lynn; Buchko, Garry W; Stacy, Robin; Myler, Peter J; Stewart, Lance J; Manoil, Colin; Van Voorhis, Wesley C

2013-01-01

The genus Burkholderia includes pathogenic gram-negative bacteria that cause melioidosis, glanders, and pulmonary infections of patients with cancer and cystic fibrosis. Drug resistance has made development of new antimicrobials critical. Many approaches to discovering new antimicrobials, such as structure-based drug design and whole cell phenotypic screens followed by lead refinement, require high-resolution structures of proteins essential to the parasite. We experimentally identified 406 putative essential genes in B. thailandensis, a low-virulence species phylogenetically similar to B. pseudomallei, the causative agent of melioidosis, using saturation-level transposon mutagenesis and next-generation sequencing (Tn-seq). We selected 315 protein products of these genes based on structure-determination criteria, such as excluding very large and/or integral membrane proteins, and entered them into the Seattle Structural Genomics Center for Infection Disease (SSGCID) structure determination pipeline. To maximize structural coverage of these targets, we applied an "ortholog rescue" strategy for those producing insoluble or difficult to crystallize proteins, resulting in the addition of 387 orthologs (or paralogs) from seven other Burkholderia species into the SSGCID pipeline. This structural genomics approach yielded structures from 31 putative essential targets from B. thailandensis, and 25 orthologs from other Burkholderia species, yielding an overall structural coverage for 49 of the 406 essential gene families, with a total of 88 depositions into the Protein Data Bank. Of these, 25 proteins have properties of a potential antimicrobial drug target i.e., no close human homolog, part of an essential metabolic pathway, and a deep binding pocket. We describe the structures of several potential drug targets in detail. This collection of structures, solubility and experimental essentiality data provides a resource for development of drugs against infections and diseases caused by Burkholderia. All expression clones and proteins created in this study are freely available by request.

Geocoronal Imaging from the Deep Space Gateway

NASA Astrophysics Data System (ADS)

Waldrop, L.; Immel, T.; Clarke, J.; Fillingim, M.; Rider, K.; Qin, J.; Bhattacharyya, D.; Doe, R.

2018-02-01

UV imaging of geocoronal emission at high spatial and temporal resolution from deep space would provide crucial new constraints on global exospheric structure and dynamics, significantly advancing models of space weather and atmospheric escape.

Theonellapeptolide IIIe, a new cyclic peptolide from the New Zealand deep water sponge, Lamellomorpha strongylata.

PubMed

Li, S; Dumdei, E J; Blunt, J W; Munro, M H; Robinson, W T; Pannell, L K

1998-06-26

The structure, stereochemistry, and conformation of theonellapeptolide IIIe (1), a new 36-membered ring cyclic peptolide from the New Zealand deep-water sponge Lamellomorpha strongylata, is described. The sequence of the cytotoxic peptolide was determined through a combination of NMR and MS-MS techniques and confirmed by X-ray crystal structure analysis, which, with chiral HPLC, established the absolute stereochemistry.

AUTOMATIC ENGLISH-TO-LOGIC TRANSLATION IN A SIMPLIFIED MODEL, A STUDY IN THE LOGIC OF GRAMMAR. FINAL REPORT.

ERIC Educational Resources Information Center

BACKER, P.O.; BOHNERT, H.G.

THE LATEST IN A SERIES OF ENGLISH-LIKE LANGUAGES IS DESCRIBED WHICH IS TRANSLATABLE INTO FORMS OF A FIRST-ORDER PREDICATE CALCULUS NOTATION. THE STUDY IS BASED ON THE HYPOTHESIS THAT SYNTACTIC AMBIGUITY ARISING FROM DIFFERENCES IN DEEP STRUCTURE CAN BE ADEQUATELY DESCRIBED ONLY IF THE DEEP STRUCTURES CAN BE SYSTEMATICALLY REPRESENTED. THE NOTATION…

Deep X-ray lithography for the fabrication of microstructures at ELSA

NASA Astrophysics Data System (ADS)

Pantenburg, F. J.; Mohr, J.

2001-07-01

Two beamlines at the Electron Stretcher Accelerator (ELSA) of Bonn University are dedicated for the production of microstructures by deep X-ray lithography with synchrotron radiation. They are equipped with state-of-the-art X-ray scanners, maintained and used by Forschungszentrum Karlsruhe. Polymer microstructure heights between 30 and 3000 μm are manufactured regularly for research and industrial projects. This requires different characteristic energies. Therefore, ELSA operates routinely at 1.6, 2.3 and 2.7 GeV, for high-resolution X-ray mask fabrication, deep and ultra-deep X-ray lithography, respectively. The experimental setup, as well as the structure quality of deep and ultra deep X-ray lithographic microstructures are described.

Double seismic zone for deep earthquakes in the izu-bonin subduction zone.

PubMed

Iidaka, T; Furukawa, Y

1994-02-25

A double seismic zone for deep earthquakes was found in the Izu-Bonin region. An analysis of SP-converted phases confirms that the deep seismic zone consists of two layers separated by approximately 20 kilometers. Numerical modeling of the thermal structure implies that the hypocenters are located along isotherms of 500 degrees to 550 degrees C, which is consistent with the hypothesis that deep earthquakes result from the phase transition of metastable olivine to a high-pressure phase in the subducting slab.

Electrical studies at the proposed Wahmonie and Calico Hills nuclear waste sites, Nevada Test Site, Nye County, Nevada

USGS Publications Warehouse

Hoover, D.B.; Chornack, Michael P.; Nervick, K.H.; Broker, M.M.

1982-01-01

Two sites in the southwest quadrant of the Nevada Test Site (NTS) were investigated as potential repositories for high-level nuclear waste. These are designated the Wahmonie and Calico Hills sites. The emplacement medium at both sites was to be an inferred intrusive body at shallow depth; the inference of the presence of the body was based on aeromagnetic and regional gravity data. This report summarizes results of Schlumberger VES, induced polarization dipole-dipole traverses and magnetotelluric soundings made in the vicinity of the sites in order to characterize the geoelectric section. At the Wahmonie site VES work identified a low resistivity unit at depth surrounding the inferred intrusive body. The low resistivity unit is believed to be either the argillite (Mississippian Eleana Formation) or a thick unit of altered volcanic rock (Tertiary). Good electrical contrast is provided between the low resistivity unit and a large volume of intermediate resistivity rock correlative with the aeromagnetic and gravity data. The intermediate resistivity unit (100-200 ohm-m) is believed to be the intrusive body. The resistivity values are very low for a fresh, tight intrusive and suggest significant fracturing, alteration and possible mineralization have occurred within the upper kilometer of rock. Induced polarization data supports the VES work, identifies a major fault on the northwest side of the inferred intrusive and significant potential for disseminated mineralization within the body. The mineralization potential is particularly significant because as late as 1928, a strike of high grade silver-gold ore was made at the site. The shallow electrical data at Calico Hills revealed no large volume high resistivity body that could be associated with a tight intrusive mass in the upper kilometer of section. A drill hole UE 25A-3 sunk to 762 m (2500 ft) at the site revealed only units of the Eleana argillite thermally metamorphosed below 396 m (1300 ft) and in part highly magnetic. Subsequent work has shown that much if not all of the magnetic and gravity anomalies can be attributed to the Eleana Formation. The alteration and doming, however, still argue for an intrusive but at greater depth than originally thought. The electrical, VES, and IP data show a complex picture due to variations in structure and alteration within the Eleana and surrounding volcanic units. These data do not suggest the presence of an intrusive in the upper kilometer of section. The magnetotelluric data however gives clear evidence for a thick, resistive body in the earth's crust below the site. While the interpreted depth is very poorly constrained due to noise and structural problems, the top of the resistive body is on the order of 2.5 km deep. The IP data also identifies area of increased polarizability at Calico Hills, which may also have future economic mineralization.

A Lower-Crust or Mantle Source for Mineralizing Fluids Beneath the Olympic Dam IOCG Deposit, Australia: New Evidence From Magnetotelluric Sounding

NASA Astrophysics Data System (ADS)

Heinson, G.

2005-12-01

The iron-oxide-copper-gold (IOCG) Olympic Dam (OD) deposit, situated along the margin of the Proterozoic Gawler Craton, South Australia, is the world's largest uranium deposit, and sixth largest copper deposit; it also contains significant reserves of gold, silver and rare-earth elements (REE). Gaining a better understanding of the mechanisms for genesis of the economic mineralisation is fundamental for defining exploration models in similar crustal-settings. To delineate crustal structures that may constrain mineral system fluid pathways, coincident deep crustal seismic and magnetotelluric (MT) transects were obtained along a 220 km section that crosses OD and the major crustal boundaries. We present results from 58 long-period (10-104 s) MT sites, with site spacing of 5 to 10 km. A 2D inversion of all MT data to a depth of 100 km shows four notable features: (a) sedimentary cover sequences with low resistivity (<20 Ω.m) thicken to 10 km towards the northern cover sequences of the Adelaide Rift Complex; (b) a northeast-dipping crustal boundary separates a highly resistive (>1000 Ω.m) Archaean crustal core, from a more conductive crust to the north (typically <500 Ω.m); (c) to the north of OD, the crust to about 20 km is quite resistive (~1000 Ω.m), but the lower crust is much more conductive (<100 Ω.m); and (d) beneath OD, we image a low-resistivity region (<100 Ω.m) throughout the crust, coincident with a seismically transparent region. We argue that the cause of the low-resistivity and low-reflectivity region beneath OD may be due to the upward movement of crustal-volatiles that have deposited conductive graphite mineralisation along grain boundaries, simultaneously annihilating acoustic impedance boundaries. The source of the volatiles may be from the mantle-degassing or retrograde metamorphism of the lower crust associated with Proterozoic crustal deformation.

Hydrogeological characterisation of a glacially affected barrier island - the North Frisian Island of Föhr

NASA Astrophysics Data System (ADS)

Burschil, T.; Scheer, W.; Kirsch, R.; Wiederhold, H.

2012-04-01

We present the application of geophysical investigations to characterise and improve the geological/hydrogeological model through the estimation of petrophysical parameters for groundwater modelling. Seismic reflection and airborne electromagnetic surveys in combination with borehole information enhance the 3-D geological model and allow a petrophysical interpretation of the subsurface. The North Sea Island of Föhr has a very complex underground structure what was already known from boreholes. The local waterworks use a freshwater body embedded in saline groundwater. Several glaciations disordered the Youngest Tertiary and Quaternary sediments by glaciotectonic thrust-faulting as well as incision and refill of glacial valleys. Both underground structures have a strong impact on the distribution of freshwater bearing aquifers. An initial hydrogeological model of Föhr was built from borehole data alone and was restricted to the southern part of the island where in the sandy areas of the Geest a large freshwater body was formed. We improved the geological/hydrogeological model by adding data from different geophysical methods, e.g. airborne electromagnetics (EM) for mapping the resistivity of the entire island, seismic reflections for detailed cross sections in the groundwater catchment area, and geophysical borehole logging for calibration of these measurements. An integrated evaluation of the results from the different geophysical methods yields reliable data. To determinate petrophysical parameter about 18 borehole logs, more than 75 m deep, and nearby airborne EM inversion models were analyzed concerning resistivity. We establish an empirical relation between measured resistivity and hydraulic conductivity for the specific area - the North Sea island of Föhr. Five boreholes concerning seismic interval velocities discriminate sand and till. The interpretation of these data was the basis for building the geological/hydrogeological 3-D model. We fitted the relevant model layers to all geophysical and geological data and created a consistent 3-D model. This model is the fundament for groundwater simulations considering forecasted changes in precipitation and sea level rise due to climate change.

Thermopower behavior in the Gd5(Si0.1Ge0.9)4 magnetocaloric compound from 4 to 300 K

NASA Astrophysics Data System (ADS)

Sousa, J. B.; Braga, M. E.; Correia, F. C.; Carpinteiro, F.; Morellon, L.; Algarabel, P. A.; Ibarra, R.

2002-04-01

Recent studies on the orthorhombic Gd5(Si0.1Ge0.9)4 compound show, upon heating, a ferromagnetic to antiferromagnetic-like (AFM*) transition at TS=78 K, coupled with a first-order structural martensitic transformation keeping the orthorhombic symmetry but producing a large increase in the interlayer Si(Ge) distances leading to covalent bond-pair breaking. A second-order AFM*→(paramagnetic)PM transition occurs at TN=125 K. We report thermopower (S) measurements for the Gd5(SixGe1-x)4 series, performed on an x=0.1 sample, from 4 to 300 K, with increasing and decreasing temperatures through successive thermal cycling. Resistivity measurements show a systematic increase in the residual resistivity and a dramatic change in the ρ(T) behavior upon thermal cycling. In spite of this, the thermopower data show a common intrinsic behavior both in the ferromagnetic phase (T

Resistance and Security Index of Networks: Structural Information Perspective of Network Security

NASA Astrophysics Data System (ADS)

Li, Angsheng; Hu, Qifu; Liu, Jun; Pan, Yicheng

2016-06-01

Recently, Li and Pan defined the metric of the K-dimensional structure entropy of a structured noisy dataset G to be the information that controls the formation of the K-dimensional structure of G that is evolved by the rules, order and laws of G, excluding the random variations that occur in G. Here, we propose the notion of resistance of networks based on the one- and two-dimensional structural information of graphs. Given a graph G, we define the resistance of G, written , as the greatest overall number of bits required to determine the code of the module that is accessible via random walks with stationary distribution in G, from which the random walks cannot escape. We show that the resistance of networks follows the resistance law of networks, that is, for a network G, the resistance of G is , where and are the one- and two-dimensional structure entropies of G, respectively. Based on the resistance law, we define the security index of a network G to be the normalised resistance of G, that is, . We show that the resistance and security index are both well-defined measures for the security of the networks.

Resistance and Security Index of Networks: Structural Information Perspective of Network Security.

PubMed

Li, Angsheng; Hu, Qifu; Liu, Jun; Pan, Yicheng

2016-06-03

Recently, Li and Pan defined the metric of the K-dimensional structure entropy of a structured noisy dataset G to be the information that controls the formation of the K-dimensional structure of G that is evolved by the rules, order and laws of G, excluding the random variations that occur in G. Here, we propose the notion of resistance of networks based on the one- and two-dimensional structural information of graphs. Given a graph G, we define the resistance of G, written , as the greatest overall number of bits required to determine the code of the module that is accessible via random walks with stationary distribution in G, from which the random walks cannot escape. We show that the resistance of networks follows the resistance law of networks, that is, for a network G, the resistance of G is , where and are the one- and two-dimensional structure entropies of G, respectively. Based on the resistance law, we define the security index of a network G to be the normalised resistance of G, that is, . We show that the resistance and security index are both well-defined measures for the security of the networks.

Resistance and Security Index of Networks: Structural Information Perspective of Network Security

PubMed Central

Li, Angsheng; Hu, Qifu; Liu, Jun; Pan, Yicheng

2016-01-01

Recently, Li and Pan defined the metric of the K-dimensional structure entropy of a structured noisy dataset G to be the information that controls the formation of the K-dimensional structure of G that is evolved by the rules, order and laws of G, excluding the random variations that occur in G. Here, we propose the notion of resistance of networks based on the one- and two-dimensional structural information of graphs. Given a graph G, we define the resistance of G, written , as the greatest overall number of bits required to determine the code of the module that is accessible via random walks with stationary distribution in G, from which the random walks cannot escape. We show that the resistance of networks follows the resistance law of networks, that is, for a network G, the resistance of G is , where and are the one- and two-dimensional structure entropies of G, respectively. Based on the resistance law, we define the security index of a network G to be the normalised resistance of G, that is, . We show that the resistance and security index are both well-defined measures for the security of the networks. PMID:27255783

VUV lithography

DOEpatents

George, Edward V.; Oster, Yale; Mundinger, David C.

1990-01-01

Deep UV projection lithography can be performed using an e-beam pumped solid excimer UV source, a mask, and a UV reduction camera. The UV source produces deep UV radiation in the range 1700-1300A using xenon, krypton or argon; shorter wavelengths of 850-650A can be obtained using neon or helium. A thin solid layer of the gas is formed on a cryogenically cooled plate and bombarded with an e-beam to cause fluorescence. The UV reduction camera utilizes multilayer mirrors having high reflectivity at the UV wavelength and images the mask onto a resist coated substrate at a preselected demagnification. The mask can be formed integrally with the source as an emitting mask.

Stereotactically Standard Areas: Applied Mathematics in the Service of Brain Targeting in Deep Brain Stimulation.

PubMed

Mavridis, Ioannis N

2017-12-11

The concept of stereotactically standard areas (SSAs) within human brain nuclei belongs to the knowledge of the modern field of stereotactic brain microanatomy. These are areas resisting the individual variability of the nuclear location in stereotactic space. This paper summarizes the current knowledge regarding SSAs. A mathematical formula of SSAs was recently invented, allowing for their robust, reproducible, and accurate application to laboratory studies and clinical practice. Thus, SSAs open new doors for the application of stereotactic microanatomy to highly accurate brain targeting, which is mainly useful for minimally invasive neurosurgical procedures, such as deep brain stimulation.

Mechanisms of deep brain stimulation

PubMed Central

Cheng, Jennifer J.; Eskandar, Emad N.

2015-01-01

Deep brain stimulation (DBS) is widely used for the treatment of movement disorders including Parkinson's disease, essential tremor, and dystonia and, to a lesser extent, certain treatment-resistant neuropsychiatric disorders including obsessive-compulsive disorder. Rather than a single unifying mechanism, DBS likely acts via several, nonexclusive mechanisms including local and network-wide electrical and neurochemical effects of stimulation, modulation of oscillatory activity, synaptic plasticity, and, potentially, neuroprotection and neurogenesis. These different mechanisms vary in importance depending on the condition being treated and the target being stimulated. Here we review each of these in turn and illustrate how an understanding of these mechanisms is inspiring next-generation approaches to DBS. PMID:26510756