Matching Deep Tow Camera study and Sea Floor geochemical characterization of gas migration at the Tainan Ridge, South China Sea

NASA Astrophysics Data System (ADS)

Fan, L. F.; Lien, K. L.; Hsieh, I. C.; Lin, S.

2017-12-01

Methane seep in deep sea environment could lead to build up of chemosynthesis communities, and a number of geological and biological anomalies as compare to the surrounding area. In order to examine the linkage between seep anomalies and those at the vicinity background area, and to detail mapping those spatial variations, we used a deep towed camera system (TowCam) to survey seafloor on the Tainan Ridge, Northeastern South China Sea (SCS). The underwater sea floor pictures could provide better spatial variations to demonstrate impact of methane seep on the sea floor. Water column variations of salinity, temperature, dissolved oxygen were applied to delineate fine scale variations at the study area. In addition, sediment cores were collected for chemical analyses to confirm the existence of local spatial variations. Our results show large spatial variations existed as a result of differences in methane flux. In fact, methane is the driving force for the observed biogeochemical variations in the water column, on the sea floor, and in the sediment. Of the area we have surveyed, there are approximately 7% of total towcam survey data showing abnormal water properties. Corresponding to the water column anomalies, underwater sea floor pictures taken from those places showed that chemosynthetic clams and muscles could be identified, together with authigenic carbonate buildups, and bacterial mats. Moreover, sediment cores with chemical anomalies also matched those in the water column and on the sea floor. These anomalies, however, represent only a small portion of the area surveyed and could not be identified with typical (random) coring method. Methane seep, therefore, require tedious and multiple types of surveys to better understand the scale and magnitude of seep and biogeochemical anomalies those were driven by gas migrations.

Effects of ecological engineered oxygenation on the bacterial community structure in an anoxic fjord in western Sweden

PubMed Central

Forth, Michael; Liljebladh, Bengt; Stigebrandt, Anders; Hall, Per O J; Treusch, Alexander H

2015-01-01

Oxygen-depleted bodies of water are becoming increasingly common in marine ecosystems. Solutions to reverse this trend are needed and under development, for example, by the Baltic deep-water OXygenation (BOX) project. In the framework of this project, the Swedish Byfjord was chosen for a pilot study, investigating the effects of an engineered oxygenation on long-term anoxic bottom waters. The strong stratification of the water column of the Byfjord was broken up by pumping surface water into the deeper layers, triggering several inflows of oxygen-rich water and increasing oxygen levels in the lower water column and the benthic zone up to 110 μmol l−1.We used molecular ecologic methods to study changes in bacterial community structure in response to the oxygenation in the Byfjord. Water column samples from before, during and after the oxygenation as well as from two nearby control fjords were analyzed. Our results showed a strong shift in bacterial community composition when the bottom water in the Byfjord became oxic. Initially dominant indicator species for oxygen minimum zones such as members of the SUP05 clade declined in abundance during the oxygenation event and nearly vanished after the oxygenation was accomplished. In contrast, aerobic species like SAR11 that initially were restricted to surface waters could later be detected deep into the water column. Overall, the bacterial community in the formerly anoxic bottom waters changed to a community structure similar to those found in oxic waters, showing that an engineered oxygenation of a large body of anoxic marine water is possible and emulates that of a natural oxygenation event. PMID:25238400

Effects of ecological engineered oxygenation on the bacterial community structure in an anoxic fjord in western Sweden.

PubMed

Forth, Michael; Liljebladh, Bengt; Stigebrandt, Anders; Hall, Per O J; Treusch, Alexander H

2015-03-01

Oxygen-depleted bodies of water are becoming increasingly common in marine ecosystems. Solutions to reverse this trend are needed and under development, for example, by the Baltic deep-water OXygenation (BOX) project. In the framework of this project, the Swedish Byfjord was chosen for a pilot study, investigating the effects of an engineered oxygenation on long-term anoxic bottom waters. The strong stratification of the water column of the Byfjord was broken up by pumping surface water into the deeper layers, triggering several inflows of oxygen-rich water and increasing oxygen levels in the lower water column and the benthic zone up to 110 μmol l(-1).We used molecular ecologic methods to study changes in bacterial community structure in response to the oxygenation in the Byfjord. Water column samples from before, during and after the oxygenation as well as from two nearby control fjords were analyzed. Our results showed a strong shift in bacterial community composition when the bottom water in the Byfjord became oxic. Initially dominant indicator species for oxygen minimum zones such as members of the SUP05 clade declined in abundance during the oxygenation event and nearly vanished after the oxygenation was accomplished. In contrast, aerobic species like SAR11 that initially were restricted to surface waters could later be detected deep into the water column. Overall, the bacterial community in the formerly anoxic bottom waters changed to a community structure similar to those found in oxic waters, showing that an engineered oxygenation of a large body of anoxic marine water is possible and emulates that of a natural oxygenation event.

Modeling seasonal variability of carbonate system parameters at the sediment -water interface in the Baltic Sea (Gdansk Deep)

NASA Astrophysics Data System (ADS)

Protsenko, Elizaveta; Yakubov, Shamil; Lessin, Gennady; Yakushev, Evgeniy; Sokołowski, Adam

2017-04-01

A one-dimensional fully-coupled benthic pelagic biogeochemical model BROM (Bottom RedOx Model) was used for simulations of seasonal variability of biogeochemical parameters in the upper sediment, Bottom Boundary Layer and the water column in the Gdansk Deep of the Baltic Sea. This model represents key biogeochemical processes of transformation of C, N, P, Si, O, S, Mn, Fe and the processes of vertical transport in the water column and the sediments. The hydrophysical block of BROM was forced by the output calculated with model GETM (General Estuarine Transport Model). In this study we focused on parameters of carbonate system at Baltic Sea, and mainly on their distributions near the sea-water interface. For validating of BROM we used field data (concentrations of main nutrients at water column and porewater of upper sediment) from the Gulf of Gdansk. The model allowed us to simulate the baseline ranges of seasonal variability of pH, Alkalinity, TIC and calcite/aragonite saturation as well as vertical fluxes of carbon in a region potentially selected for the CCS storage. This work was supported by project EEA CO2MARINE and STEMM-CCS.

In Situ Mo Isotope Fractionation in the Water Columns of Euxinic Basins

NASA Astrophysics Data System (ADS)

Neubert, N.; Nägler, T. F.; Böttcher, M. E.

2007-12-01

The present study investigates for the first time the overall process of molybdenum (Mo) scavenging in modern euxinic systems using Mo concentration and stable isotope measurements. We analyzed samples from three different sites: The Black Sea, the largest permanently euxinic basin, and two anoxic basins of the Baltic Sea, the Gotland Deep and the Landsort Deep which have maximum water depths of 247 m and 459 m, respectively. Water column profiles, as well as surface sediment samples, were recovered from different water depths. Mo is a redox-sensitive trace metal which is soluble as the molybdate oxyanion in oxic seawater with a residence time of about 800 ka. The isotope signature of Mo is a relatively new proxy used to reconstruct the paleo-redox conditions of the Earth's atmosphere and the oceanic system. The Mo isotope composition in seawater is homogeneous (Siebert et al. 2003). Scavenging of Mo under euxinic conditions is related to the amount of free sulfide in the water column. Near total removal of Mo from the water column is reached at aquatic sulfide concentration of c. 11 μM (Erickson and Helz 2000). In the Black Sea this corresponds to a water depth of about 400 m. Sediment samples of the Black Sea from more then 400 m water depth show seawater isotopic composition, in line with the assumption of bulk Mo removal. However, shallower sediments deposited under lower aquatic sulfide concentrations show significant Mo isotope fractionation. The Baltic Sea oceanographic conditions, including temporary bottom water oxygenation due to sporadic North Sea water inflows, are more complex than in the Black Sea. The aquatic sulfide concentration in the water column is less than 5 μM in the two anoxic troughs. As expected from this lower sulfidity, the surface sediments show Mo fractionation similar to the oxic to slightly euxinic sediments of the Black Sea. Our new results on the Mo isotopic composition in euxinic water columns clearly indicate in situ fractionation of Mo isotopes. All euxinic water samples from the three settings are shifted towards heavier Mo isotope signatures, thus complementing the lighter values in the surface sediments (Nagler et al. 2005).

Availability of free oxygen in deep bottom water of some Archean-Early Paleoproterozoic ocean basins as derived from iron formation facies analyses

NASA Astrophysics Data System (ADS)

Beukes, N. J.; Smith, A.

2013-12-01

Archean to Early Paleoproterozoic ocean basins are commonly, although not exclusively, depicted as rather static systems; either permanently stratified with shallow mixed oxygenated water overlying anoxic deep water or with a totally anoxic water column. The anoxic water columns are considered enriched in dissolved ferrous iron derived from hydrothermal plume activity. These sourced deposition of iron formations through precipitation of mainly ferrihydrite via reaction with free oxygen in the stratified model or anaerobic iron oxidizing photoautotrophs in the anoxic model. However, both these models face a simple basic problem if detailed facies reconstructions of deepwater microbanded iron formations (MIFs) are considered. In such MIFs it is common that the deepest water and most distal facies is hematite rich followed shoreward by magnetite, iron silicate and siderite facies iron formation. Examples of such facies relations are known from jaspilitic iron formation of the ~3,2 Ga Fig Tree Group (Barberton Mountainland), ~ 2,95 Ga iron formations of the Witwatersrand-Mozaan basin and the ~2,5 Ga Kuruman Iron Formation, Transvaal Supergroup, South Africa. Facies relations of these MIFs with associated siliciclastics or carbonates also indicate that the upper water columns of the basins, down to below wave base, were depleted in iron favoring anoxic-oxic stratification rather than total anoxia. In the MIFs it can be shown that hematite in the distal facies represents the earliest formed diagenetic mineral; most likely crystallized from primary ferrihydrite. The problem is one of how ferrihydrite could have been preserved on the ocean floor if it was in direct contact with reducing ferrous deep bottom water. Rather dissolved ferrous iron would have reacted with ferrihydrite to form diagenetic magnetite. This dilemma is resolved if in the area of deepwater hematite MIF deposition, the anoxic ferrous iron enriched plume was detached from the basin floor due to buoyancy in slightly oxygenated cold deep ocean water. Ferrihydrite, precipitated along the oxic-anoxic interface along the bottom of the buoyant plume could then settle to the floor of the basin without interference of dissolved ferrous iron. This model requires that oxygen, derived from photosynthesis in shallow water, circulated down to deep water creating a slightly oxygenated ocean basin system invaded by buoyant anoxic ferrous plumes. In areas where these plumes came in contact with the basin floor, magnetite and/or carbonate facies iron formation formed; the latter in areas of highest organic carbon influx. Extensive glacial diamictites in the Witwatersrand-Mozaan basin argues for climatic zonation in the Mesoarchean driving deep ocean currents. This model may explain why the rise of oxygen in the atmosphere was so long delayed after development of oxygenic photosynthesis; simply because in the dynamic ocean system oxygen could come into contact with much larger volumes of reduced species in the water column and along the ocean floor than in a static stratified system. It also impacts on reconstruction of microbial communities in Archean oceans.

Predator-guided sampling reveals biotic structure in the bathypelagic.

PubMed

Benoit-Bird, Kelly J; Southall, Brandon L; Moline, Mark A

2016-02-24

We targeted a habitat used differentially by deep-diving, air-breathing predators to empirically sample their prey's distributions off southern California. Fine-scale measurements of the spatial variability of potential prey animals from the surface to 1,200 m were obtained using conventional fisheries echosounders aboard a surface ship and uniquely integrated into a deep-diving autonomous vehicle. Significant spatial variability in the size, composition, total biomass, and spatial organization of biota was evident over all spatial scales examined and was consistent with the general distribution patterns of foraging Cuvier's beaked whales (Ziphius cavirostris) observed in separate studies. Striking differences found in prey characteristics between regions at depth, however, did not reflect differences observed in surface layers. These differences in deep pelagic structure horizontally and relative to surface structure, absent clear physical differences, change our long-held views of this habitat as uniform. The revelation that animals deep in the water column are so spatially heterogeneous at scales from 10 m to 50 km critically affects our understanding of the processes driving predator-prey interactions, energy transfer, biogeochemical cycling, and other ecological processes in the deep sea, and the connections between the productive surface mixed layer and the deep-water column. © 2016 The Author(s).

Accumulation of artificial radionuclides in deep sediments of the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Garcia-Orellana, J.; Sanchez-Cabeza, J. A.; Masque, P.; Costa, E.; Bruach, J. M.; Morist, A.; Luna, J. A.

2003-04-01

Concentrations and inventories of artificial radionuclides (90Sr, 137Cs and 239,40Pu) were determined in deep sediment cores (3.000 m) collected in the western and eastern basins of the Mediterranean Sea in the frame of the ADIOS project. Artificial radionuclides enter the Mediterranean Sea mainly though atmospheric deposition after nuclear weapons tests and the Chernobyl accident, but also through the river discharge of effluents of nuclear facilities (e.g. Rhone and Ebro rivers). The aim of this work is to investigate the degree by which pollutants are transferred to the deep environment of the Mediterranean Sea as a basis to elucidate their effects on benthic organisms. The mean inventories of 239+240Pu, 137Cs and 90Sr in the Western basin are 2.77 ± 0.26, 68 ± 12 and < 7 Bq\\cdotm-2 respectively and 3.29 ± 0.60, 115 ± 33 and 249±154 Bq\\cdotm-2 in the Eastern basin. The activity - depth profiles of 210Pb, together with 14C dating, indicate that sediment mixing redistributes the artificial radionuclides within the first 2 cm of the sedimentary column. Artificial radionuclides inventories in the deep-sea sediments were used to calculate the fraction of the total inventory of artificial radionuclides that is accumulated in the deep sea sediments after scavenging from the water column. Indeed, a balance of the radionuclide distributions in the water column allows evaluating the importance of lateral transport of particulate matter from the continental margins on the accumulation of artificial radionuclides in the deep, open Mediterranean Sea. This is achieved in i) comparison with reported data from coastal areas at different locations in the Mediterranean Sea, and ii) balance of the distribution of the natural radionuclide 210Pb in studied areas (vertical profiles of dissolved and particulate activities, fluxes determined by using sediment trap deployed at different depths and inventories in the bottom sediments). The results, taking into account radioactive decay and exchange fluxes through the Gibraltar Strait, permit to estimate the residence times of pollutants in the water column and predict future evolution of their distributions.

Prokaryotic dynamics and heterotrophic metabolism in a deep convection site of Eastern Mediterranean Sea (the Southern Adriatic Pit)

NASA Astrophysics Data System (ADS)

Azzaro, M.; La Ferla, R.; Maimone, G.; Monticelli, L. S.; Zaccone, R.; Civitarese, G.

2012-08-01

We report on investigations of prokaryotic abundance, biomass, extracellular enzymatic activity, prokaryotic heterotrophic production and respiration in the full water column (˜1200 m) of a deep convection site (the Southern Adriatic Pit), carried out on six cruises in 2006-2008. Prokaryotic abundance (PA) varied vertically and temporally and ranged from 1.2 to 20.4×105 cell ml-1. Cell volumes, generally increased with depth; the lowest mean cell volume was observed in a period with no active convective process (Feb-07) and the highest in a period of stratification (Jun-08) following the convection process occurred in Feb-08. Prokaryotic biomass decreased with the depth and was related with both seasonal cycles of organic matter and hydrological processes. The picophytoplankton ranged in the upper layer (UL) from 0.089 to 10.71×104 cell ml-1. Cells were also recorded till 500 m depth in Feb-08 and this finding could be linked to water convection occurred in the Southern Adriatic Pit in that month. In UL the variations of enzymatic activities as well as leucine-aminopeptidase/ß-glucosidase ratio showed a seasonal trend probably linked to the productive processes of the photic layer. An inverse relation between alkaline phosphatase activity (APA) and phosphate concentrations was found (APA=0.0003PO4-1.7714, R2=0.333, P<0.05). Generally cell-specific enzymatic activities increased with depth as did cell-specific carbon dioxide production rates, while cell-specific prokaryotic heterotrophic production had an opposite trend. High values of prokaryotic growth efficiency registered in the deep layers in Nov-06 reflected a supply of preformed C transported within the deep water masses. Overall, in 2007 when no convective phenomenon was observed, the variability of prokaryotic metabolism was governed by the seasonal cycle of the organic matter, while in Nov-06 and Jun-08 the dynamics of deep water ventilation influenced the trend along the water column of many microbial parameters. The yearly trophic balance of the study site appeared to move towards autotrophy only in UL, whilst in the whole water column, the prokaryotic carbon demand exceeded POC availability rained down from euphotic zone. This mismatch was balanced by the DOC entrapped in the "younger waters" of new formation that alters the normal flux of the biological pump and fuels the deep marine biota in this area of deep water convection.

Environmental Conditions in a Carpathian Deep Sea Basin During the Period Preceding Oceanic Anoxic Event 2 - A Case Study from the Skole Nappe

NASA Astrophysics Data System (ADS)

Bąk, Krzysztof; Bąk, Marta; Górny, Zbigniew; Wolska, Anna

2015-01-01

Hemipelagic green clayey shales and thin muddy turbidites accumulated in a deep sea environment below the CCD in the Skole Basin, a part of the Outer Carpathian realm, during the Middle Cenomanian. The hemipelagites contain numerous radiolarians, associated with deep-water agglutinated foraminifera. These sediments accumulated under mesotrophic conditions with limited oxygen concentration. Short-term periodic anoxia also occurred during that time. Muddy turbidity currents caused deposition of siliciclastic and biogenic material, including calcareous foramini-fers and numerous sponge spicules. The preservation and diversity of the spicules suggests that they originate from disarticulation of moderately diversified sponge assemblages, which lived predominantly in the neritic-bathyal zone. Analyses of radiolarian ecological groups and pellets reflect the water column properties during the sedimentation of green shales. At that time, surface and also intermediate waters were oxygenated enough and sufficiently rich in nutri-ents to enable plankton production. Numerous, uncompacted pellets with nearly pristine radiolarian skeletons inside show that pelletization was the main factor of radiolarian flux into the deep basin floor. Partly dissolved skeletons indicate that waters in the Skole Basin were undersaturated in relation to silica content. Oxygen content might have been depleted in the deeper part of the water column causing periodic anoxic conditions which prevent rapid bacterial degra-dation of the pellets during their fall to the sea floor.

Heterotrophic Protists in Hypersaline Microbial Mats and Deep Hypersaline Basin Water Columns

PubMed Central

Edgcomb, Virginia P.; Bernhard, Joan M.

2013-01-01

Although hypersaline environments pose challenges to life because of the low water content (water activity), many such habitats appear to support eukaryotic microbes. This contribution presents brief reviews of our current knowledge on eukaryotes of water-column haloclines and brines from Deep Hypersaline Anoxic Basins (DHABs) of the Eastern Mediterranean, as well as shallow-water hypersaline microbial mats in solar salterns of Guerrero Negro, Mexico and benthic microbialite communities from Hamelin Pool, Shark Bay, Western Australia. New data on eukaryotic diversity from Shark Bay microbialites indicates eukaryotes are more diverse than previously reported. Although this comparison shows that eukaryotic communities in hypersaline habitats with varying physicochemical characteristics are unique, several groups are commonly found, including diverse alveolates, strameonopiles, and fungi, as well as radiolaria. Many eukaryote sequences (SSU) in both regions also have no close homologues in public databases, suggesting that these environments host unique microbial eukaryote assemblages with the potential to enhance our understanding of the capacity of eukaryotes to adapt to hypersaline conditions. PMID:25369746

Methane release from sediment seeps to the atmosphere is counteracted by highly active Methylococcaceae in the water column of deep oligotrophic Lake Constance.

PubMed

Bornemann, Maren; Bussmann, Ingeborg; Tichy, Lucas; Deutzmann, Jörg; Schink, Bernhard; Pester, Michael

2016-08-01

Methane emissions from freshwater environments contribute substantially to global warming but are under strong control of aerobic methane-oxidizing bacteria. Recently discovered methane seeps (pockmarks) in freshwater lake sediments have the potential to bypass this control by their strong outgassing activity. Whether this is counteracted by pelagic methanotrophs is not well understood yet. We used a (3)H-CH4-radiotracer technique and pmoA-based molecular approaches to assess the activity, abundance and community structure of pelagic methanotrophs above active pockmarks in deep oligotrophic Lake Constance. Above profundal pockmarks, methane oxidation rates (up to 458 nmol CH4 l(-1) d(-1)) exceeded those of the surrounding water column by two orders of magnitude and coincided with maximum methanotroph abundances of 0.6% of the microbial community. Phylogenetic analysis indicated a dominance of members of the Methylococcaceae in the water column of both, pockmark and reference sites, with most of the retrieved sequences being associated with a water-column specific clade. Communities at pockmark and reference locations also differed in parts, which was likely caused by entrainment of sediment-hosted methanotrophs at pockmark sites. Our results show that the release of seep-derived methane to the atmosphere is counteracted by a distinct methanotrophic community with a pronounced activity throughout bottom waters. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

From the Surface to the Deep-Sea: Bacterial Distributions across Polymetallic Nodule Fields in the Clarion-Clipperton Zone of the Pacific Ocean.

PubMed

Lindh, Markus V; Maillot, Brianne M; Shulse, Christine N; Gooday, Andrew J; Amon, Diva J; Smith, Craig R; Church, Matthew J

2017-01-01

Marine bacteria regulate fluxes of matter and energy essential for pelagic and benthic organisms and may also be involved in the formation and maintenance of commercially valuable abyssal polymetallic nodules. Future mining of these nodule fields is predicted to have substantial effects on biodiversity and physicochemical conditions in mined areas. Yet, the identity and distributions of bacterial populations in deep-sea sediments and associated polymetallic nodules has received relatively little attention. We examined bacterial communities using high-throughput sequencing of bacterial 16S rRNA gene fragments from samples collected in the water column, sediment, and polymetallic nodules in the Pacific Ocean (bottom depth ≥4,000 m) in the eastern Clarion-Clipperton Zone. Operational taxonomic units (OTUs; defined at 99% 16S rRNA gene identity) affiliated with JTB255 (Gammaproteobacteria) and Rhodospirillaceae (Alphaproteobacteria) had higher relative abundances in the nodule and sediment habitats compared to the water column. Rhodobiaceae family and Vibrio OTUs had higher relative abundance in nodule samples, but were less abundant in sediment and water column samples. Bacterial communities in sediments and associated with nodules were generally similar; however, 5,861 and 6,827 OTUs found in the water column were retrieved from sediment and nodule habitats, respectively. Cyanobacterial OTUs clustering among Prochlorococcus and Synechococcus were detected in both sediments and nodules, with greater representation among nodule samples. Such results suggest that vertical export of typically abundant photic-zone microbes may be an important process in delivery of water column microorganisms to abyssal habitats, potentially influencing the structure and function of communities in polymetallic nodule fields.

Comparison of formation and fluid-column logs in a heterogeneous basalt aquifer

USGS Publications Warehouse

Paillet, F.L.; Williams, J.H.; Oki, D.S.; Knutson, K.D.

2002-01-01

Deep observation boreholes in the vicinity of active production wells in Honolulu, Hawaii, exhibit the anomalous condition that fluid-column electrical conductivity logs and apparent profiles of pore-water electrical conductivity derived from induction conductivity logs are nearly identical if a formation factor of 12.5 is assumed. This condition is documented in three boreholes where fluid-column logs clearly indicate the presence of strong borehole flow induced by withdrawal from partially penetrating water-supply wells. This result appears to contradict the basic principles of conductivity-log interpretation. Flow conditions in one of these boreholes was investigated in detail by obtaining flow profiles under two water production conditions using the electromagnetic flowmeter. The flow-log interpretation demonstrates that the fluid-column log resembles the induction log because the amount of inflow to the borehole increases systematically upward through the transition zone between deeper salt water and shallower fresh water. This condition allows the properties of the fluid column to approximate the properties of water entering the borehole as soon as the upflow stream encounters that producing zone. Because this condition occurs in all three boreholes investigated, the similarity of induction and fluid-column logs is probably not a coincidence, and may relate to aquifer response under the influence of pumping from production wells.

Comparison of formation and fluid-column logs in a heterogeneous basalt aquifer.

PubMed

Paillet, F L; Williams, J H; Oki, D S; Knutson, K D

2002-01-01

Deep observation boreholes in the vicinity of active production wells in Honolulu, Hawaii, exhibit the anomalous condition that fluid-column electrical conductivity logs and apparent profiles of pore-water electrical conductivity derived from induction conductivity logs are nearly identical if a formation factor of 12.5 is assumed. This condition is documented in three boreholes where fluid-column logs clearly indicate the presence of strong borehole flow induced by withdrawal from partially penetrating water-supply wells. This result appears to contradict the basic principles of conductivity-log interpretation. Flow conditions in one of these boreholes was investigated in detail by obtaining flow profiles under two water production conditions using the electromagnetic flowmeter. The flow-log interpretation demonstrates that the fluid-column log resembles the induction log because the amount of inflow to the borehole increases systematically upward through the transition zone between deeper salt water and shallower fresh water. This condition allows the properties of the fluid column to approximate the properties of water entering the borehole as soon as the upflow stream encounters that producing zone. Because this condition occurs in all three boreholes investigated, the similarity of induction and fluid-column logs is probably not a coincidence, and may relate to aquifer response under the influence of pumping from production wells.

Water column particulate matter: A key contributor to phosphorus regeneration in a coastal eutrophic environment, the Chesapeake Bay: Particulate phosphorus in the Chesapeake Bay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Jiying; Reardon, Patrick; McKinley, James P.

Particulate phosphorus (PP) in the water column is an essential component of phosphorus (P) cycling in aquatic ecosystems yet its composition and transformations remain largely uncharacterized. To understand the roles of suspended particulates on regeneration of inorganic P (Pi) into the water column as well as sequestration into more stable mineral precipitates, we studied seasonal variation in both organic and inorganic P speciation in suspended particles in three sites in the Chesapeake Bay using sequential P extraction, 1D (31P) and 2D (1H-31P) nuclear magnetic resonance (NMR) spectroscopies, and electron microprobe analyses (EMPA). Remineralization efficiency of particulate P average 8% andmore » 56% in shallow and deep sites respectively, suggesting the importance of PP remineralization is in resupplying water column Pi. Strong temporal and spatial variability of organic P composition, distributions, and remineralization efficiency were observed relating to water column parameters such as temperature and redox conditions: concentration of orthophosphate monoesters and diesters, and diester-to-monoester (D/M) ratios decreased with depth. Both esters and the D/M ratios were lower in the hypoxic July and September. In contrast, pyrophosphate and orthophosphate increased with depth, and polyphosphates was high in the anoxic water column. Sequential extraction and EMPA analyses of the suspended particles suggest presence of Ca-bound phosphate in the water column. We hypothesize authigenic precipitation of carbonate fluorapatite and/or its precursor mineral(s) in Pi rich water column, supported by our thermodynamic calculations. Our results, overall, reveal the important role suspended particles play in P remineralization and P sequestration in the Chesapeake Bay water column, provide important implications on P bioavailability and P sinks in similar eutrophic coastal environments.« less

Southern Ocean Circulation: a High Resolution Examination of the Last Deglaciation from Deep-Sea Corals

NASA Astrophysics Data System (ADS)

Robinson, L. F.; Li, T.; Chen, T.; Burke, A.; Pegrum Haram, A.; Stewart, J.; Rae, J. W. B.; van de Flierdt, T.; Struve, T.; Wilson, D. J.

2017-12-01

Two decades ago it was first noted that the skeletal remains of deep-sea corals had the potential to provide absolutely dated archives of past ocean conditions. In the intervening twenty years this field has developed to the point where strategic collections and high throughput dating techniques now allow high resolution, well dated records of past deep sea behaviour to be produced. Likewise, efforts to improve understanding of biomineralisation and growth rates are leading to refinements in proxy tools useful for examining circulation, nutrient and carbon cycling, temperature and weathering processes. Deep-sea corals are particularly valuable archives in high latitude regions where radiocarbon-based age models are susceptible to large changes in surface reservoir ages. In this presentation we show new high resolution multiproxy records of the Southern Ocean (Drake Passage) made on U-Th dated corals spanning the last glacial cycle. With more than seventeen hundred reconnaissance ages, and around 200 precise isotope dilution U-Th ages, subtle changes in ocean behaviour can be identified during times of abrupt climate change. The geochemical signature of corals from the deepest sites, closest to modern day Lower Circumpolar Deep Waters, typically show a gradual shift from glacial to Holocene values during deglaciation, likely related to ventilation of the deep ocean. By contrast for the samples collected shallower in the water column (within sites currently bathed by Upper Circumpolar Deep Waters and Antarctic Intermediate and Mode Waters) the evidence points to a more complicated picture. Vertical zonation in the geochemical data suggests that periods of stratification are interspersed with mixing events within the upper 1500m of the water column. At the same time comparison to U-Th dated records from the low latitude Pacific and Atlantic points to an important role for the Southern Ocean in feeding the intermediate waters of both ocean basins throughout the deglaciation.

Microbial community composition and function in the Tonga Trench: from 400m below the sea surface to 9100m water depth and from 0 to 2 m below the seafloor.

NASA Astrophysics Data System (ADS)

Leon Zayas, R. I.; Bartlett, D.; Biddle, J.

2016-12-01

Exploration of the deep ocean has expanded our understanding of oceanic ecosystems including continental margins and mid-ocean ridges, but little is known about the deepest sites on Earth, oceanic trenches. In this study, sediment and water samples were collected from the Tonga Trench at 9100m below sea level. These include four water column samples at depths of 400m, 3000m, 5000m and 9100m, and sediment samples at 0, 1, and 2 meter below the seafloor (mbsf). DNA was extracted and sequencing was performed for the recovery of metagenomic data for all samples. The analysis of the sediment samples from Tonga Trench has provided a new perspective of life in the deep ocean. The data for microbial community composition and metabolic profiles at the surface sediments, 0 mbsf, suggest that the microbes are present and taxonomically similar to the water column microbes, and perform an array of aerobic as well as anaerobic metabolisms, including degradation of organic carbon, oxidative phosphorylation, fermentation, nitrate reduction and sulfur oxidation among others. On the other hand, at 1 and 2 mbsf, the microbial community has diminished richness and diversity when compared to 0 mbsf and is potentially environmentally degraded due to the lack of quality data recoverable. Tonga Trench water column metagenomes are compared to other deep and hadal environments to better understand how different geographical locations, water masses and depth affect microbial community composition, distribution and metabolic potential. To our knowledge, this is the deepest metagenome analyzed to date (9100m), presenting an unprecedented look at one of the deepest environments on our planet.

WATER TRANSFER FROM SOIL TO THE ATMOSPHERE AS RELATED TO SOIL PROPERTIES, PLANT CHARACTERISTICS AND WEATHER.

DTIC Science & Technology

soil psychrometer and the porous plate apparatus. Only a negligible quantity of soil water is displaced. Such data are used to study interactions of...through three irrigation cycles in a soil column 130 cm deep; soil water potential was measured with tensiometers and a thermocouple psychrometer ; plant

Carbonate dissolution in the South Atlantic Ocean: evidence from ultrastructure breakdown in Globigerina bulloides

NASA Astrophysics Data System (ADS)

Dittert, Nicolas; Henrich, Rüdiger

2000-04-01

Ultrastructure dissolution susceptibility of the planktic foraminifer Globigerina bulloides, carbonate ion content of the water column, calcium carbonate content of the sediment surface, and carbonate/carbon weight percentage ratio derived from sediment surface samples were investigated in order to reconstruct the position of the calcite saturation horizon, the sedimentary calcite lysocline, and the calcium carbonate compensation depth (CCD) in the modern South Atlantic Ocean. Carbonate ion data from the water column refer to the GEOSECS locations 48, 103, and 109 and calcium carbonate data come from 19 GeoB sediment surface samples of 4 transects into the Brazil, the Guinea, and the Cape Basins. We present a new (paleo-) oceanographic tool, namely the Globigerina bulloides dissolution index (BDX). Further, we give evidence (a) for progressive G. bulloides ultrastructural breakdown with increasing carbonate dissolution even above the lysocline; (b) for a sharp BDX increase at the sedimentary lysocline; and (c) for the total absence of this species at the CCD. BDX puts us in the position to distinguish the upper open ocean and the upwelling influenced continental margin above from the deep ocean below the sedimentary lysocline. Carbonate ion data from water column samples, calcite weight percentage data from surface sediment samples, and carbonate/carbon weight percentage ratio appear to be good proxies to confirm BDX. As shown by BDX both the calcite saturation horizon (in the water column) and the sedimentary lysocline (at the sediment-water interface) mark the boundary between the carbonate ion undersaturated and highly corrosive Antarctic Bottom Water and the carbonate ion saturated North Atlantic Deep Water (NADW) of the modern South Atlantic.

SWIM: A Semi-Analytical Ocean Color Inversion Algorithm for Optically Shallow Waters

NASA Technical Reports Server (NTRS)

McKinna, Lachlan I. W.; Werdell, P. Jeremy; Fearns, Peter R. C. S.; Weeks, Scarla J.; Reichstetter, Martina; Franz, Bryan A.; Bailey, Sean W.; Shea, Donald M.; Feldman, Gene C.

2014-01-01

In clear shallow waters, light that is transmitted downward through the water column can reflect off the sea floor and thereby influence the water-leaving radiance signal. This effect can confound contemporary ocean color algorithms designed for deep waters where the seafloor has little or no effect on the water-leaving radiance. Thus, inappropriate use of deep water ocean color algorithms in optically shallow regions can lead to inaccurate retrievals of inherent optical properties (IOPs) and therefore have a detrimental impact on IOP-based estimates of marine parameters, including chlorophyll-a and the diffuse attenuation coefficient. In order to improve IOP retrievals in optically shallow regions, a semi-analytical inversion algorithm, the Shallow Water Inversion Model (SWIM), has been developed. Unlike established ocean color algorithms, SWIM considers both the water column depth and the benthic albedo. A radiative transfer study was conducted that demonstrated how SWIM and two contemporary ocean color algorithms, the Generalized Inherent Optical Properties algorithm (GIOP) and Quasi-Analytical Algorithm (QAA), performed in optically deep and shallow scenarios. The results showed that SWIM performed well, whilst both GIOP and QAA showed distinct positive bias in IOP retrievals in optically shallow waters. The SWIM algorithm was also applied to a test region: the Great Barrier Reef, Australia. Using a single test scene and time series data collected by NASA's MODIS-Aqua sensor (2002-2013), a comparison of IOPs retrieved by SWIM, GIOP and QAA was conducted.

Measurements of slope currents and internal tides on the Continental Shelf and slope off Newport Beach, California

USGS Publications Warehouse

Rosenberger, Kurt J.; Noble, Marlene A.; Norris, Benjamin

2014-01-01

An array of seven moorings housing current meters and oceanographic sensors was deployed for 6 months at 5 sites on the Continental Shelf and slope off Newport Beach, California, from July 2011 to January 2012. Full water-column profiles of currents were acquired at all five sites, and a profile of water-column temperature was also acquired at two of the five sites for the duration of the deployment. In conjunction with this deployment, the Orange County Sanitation District deployed four bottom platforms with current meters on the San Pedro Shelf, and these meters provided water-column profiles of currents. The data from this program will provide the basis for an investigation of the interaction between the deep water flow over the slope and the internal tide on the Continental Shelf.

Mixing on the Heard Island Plateau during HEOBI

NASA Astrophysics Data System (ADS)

Robertson, R.

2016-12-01

On the plateau near Heard and McDonald Islands, the water column was nearly always well mixed. Typically, temperature differences between the surface and the bottom, 100-200 m, were less than 0.2oC and often less that 0.1oC. Surface stratification developed through insolation and deep primarily through a combination of upwelling from canyons and over the edge of the plateau and tidal advection. This stratification was primarily removed by a combination of wind and tidal mixing. Persistent winds of 30 knots mixed the upper 20-50 m. Strong wind events, 40-60 knots, mixed the water column to 100-200 m depth, which over the plateau, was often the entire water column. Benthic tidal friction mixed the bottom 30-50 m. Although the water column was unstratified at the two plume sites intensively investigated, tidal velocities were baroclinic, probably due to topographic controls. Tidal advection changed the bottom temperatures by 0.5oC within 8 hours, more than doubling the prior stratification. Wind mixing quickly homogenized the water column, resulting in the surface often showing the deeper upwelling and advective events. Although acoustic plumes with bubbles were observed in the water column, there was no evidence of geothermal vents or geothermal influence on temperatures. Mixing by bubbles rising in the water column was indistinguishable from the wind and tidal mixing, although the strongest upward vertical velocities were observed at the sites of these acoustic/bubble plumes.

Vertical distribution of the prokaryotic cell size in the Mediterranean Sea

NASA Astrophysics Data System (ADS)

La Ferla, R.; Maimone, G.; Azzaro, M.; Conversano, F.; Brunet, C.; Cabral, A. S.; Paranhos, R.

2012-12-01

Distributions of prokaryotic cell size and morphology were studied in different areas of the Mediterranean Sea by using image analysis on samples collected from surface down to bathypelagic layers (max depth 4,900 m) in the Southern Tyrrhenian, Southern Adriatic and Eastern Mediterranean Seas. Distribution of cell size of prokaryotes in marine ecosystem is very often not considered, which makes our study first in the context of prokaryotic ecology. In the deep Mediterranean layers, an usually-not-considered form of carbon sequestration through prokaryotic cells has been highlighted, which is consistent with an increase in cell size with the depth of the water column. A wide range in prokaryotic cell volumes was observed (between 0.045 and 0.566 μm3). Increase in cell size with depth was opposed to cell abundance distribution. Our results from microscopic observations were confirmed by the increasing HNA/LNA ratio (HNA, cells with high nucleic acid content; LNA, cells with low nucleic acid content) along the water column. Implications of our results on the increasing cell size with depth are in the fact that the quantitative estimation of prokaryotic biomass changes along the water column and the amount of carbon sequestered in the deep biota is enhanced.

Water mass circulation and weathering inputs in the Labrador Sea based on coupled Hf-Nd isotope compositions and rare earth element distributions

NASA Astrophysics Data System (ADS)

Filippova, Alexandra; Frank, Martin; Kienast, Markus; Rickli, Jörg; Hathorne, Ed; Yashayaev, Igor M.; Pahnke, Katharina

2017-02-01

The Labrador Sea is one of the key areas for deep water formation driving the Atlantic thermohaline circulation and thus plays an important role in Northern Hemisphere climatic fluctuations. In order to better constrain the overturning processes and the origins of the distinct water masses, combined dissolved Hf-Nd isotopic compositions and rare earth element (REE) distribution patterns were obtained from four water depth profiles along a section across the Labrador Sea. These were complemented by one surface sample off the southern tip of Greenland, three shallow water samples off the coast of Newfoundland, and two deep water samples off Nova Scotia. Although light REEs are markedly enriched in the surface waters off the coast of Newfoundland compared to north Atlantic waters, the REE concentration profiles are essentially invariant throughout the water column across the Labrador Sea. The hafnium concentrations of surface waters exhibit a narrow range between 0.6 and 1 pmol/kg but are not significantly higher than at depth. Neodymium isotope signatures (ɛNd) vary from unradiogenic values between -16.8 and -14.9 at the surface to more radiogenic values near -11.0 at the bottom of the Labrador Sea mainly reflecting the advection of the Denmark Strait Overflow Water and North East Atlantic Deep Water, the signatures of which are influenced by weathering contributions from Icelandic basalts. Unlike Nd, water column radiogenic Hf isotope signatures (ɛHf) are more variable representing diverse weathering inputs from the surrounding landmasses. The least radiogenic seawater ɛHf signatures (up to -11.7) are found in surface waters close to Greenland and near the Canadian margin. This reflects the influence of recirculating Irminger Current Waters, which are affected by highly unradiogenic inputs from Greenland. A three to four ɛHf unit difference is observed between Denmark Strait Overflow Water (ɛHf ∼ -4) and North East Atlantic Deep Water (ɛHf ∼ -0.1), although their source waters have essentially the same ɛNd signature. This most likely reflects different weathering signals of hafnium delivered to Denmark Strait Overflow Water and North East Atlantic Deep Water (incongruent weathering of old rocks from Greenland versus basaltic rocks from Iceland). In addition, the ɛHf data resolve two layers within the main body of Labrador Sea Water not visible in the ɛNd distribution, which are shallow Labrador Sea Water (ɛHf ∼ -2) and deep Labrador Sea Water (ɛHf ∼ -4.5). The latter layer was formed between the late 1980's and mid 1990's during the last cold state of the Labrador Sea and underwent substantial modification since its formation through the admixture of Irminger Water, Iceland Slope Water and North East Atlantic Deep Water, which is reflected in its less radiogenic ɛHf signature. The overall behavior of Hf in the water column suggests its higher sensitivity to local changes in weathering inputs on annual to decadal timescales. Although application of Hf isotopes as a tracer for global water mass mixing is complicated by their susceptibility to incongruent weathering inputs they are a promising tracer of local processes in restricted basins such as the Labrador Sea.

Carbon Composition of Particulate Organic Carbon in the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Rogers, K.; Montoya, J. P.; Weber, S.; Bosman, S.; Chanton, J.

2016-02-01

The Deepwater Horizon blowout released 5.0x1011 g C from gaseous hydrocarbons and up to 6.0x1011g C from oil into the water column. Another carbon source, adding daily to the water column, leaks from the natural hydrocarbon seeps that pepper the seafloor of the Gulf of Mexico. How much of this carbon from the DWH and natural seeps is assimilated into particulate organic carbon (POC) in the water column? We filtered seawater collected in 2010, 2012, and 2013 from seep and non-seep sites, collecting POC on 0.7µm glass microfiber filters and analyzing the POC for stable and radiocarbon isotopes. Mixing models based on carbon isotopic endmembers of methane, oil, and modern production were used to estimate the percentage of hydrocarbon incorporated into POC. Significant differences were seen between POC from shallow and deep waters and between POC collected from seep, non-seep, and blowout sites; however yearly differences were not as evident suggesting the GOM has a consistent supply of depleted carbon. Stable carbon isotopes signatures of POC in the Gulf averaged -23.7±2.5‰ for shallow samples and -26.65±2.9‰ for deep POC samples, while radiocarbon signatures averaged -100.4±146.1‰ for shallow and -394.6±197‰ for deep samples. POC in the northern Gulf are composed of 23-91% modern carbon, 2-21% methane, and 0-71% oil. Oil plays a major role in the POC composition of the GOM, especially at the natural seep GC600.

Intrusion Pattern of the Offshore Kuroshio Branch Current and Its Effects on Nutrient Contributions in the East China Sea

NASA Astrophysics Data System (ADS)

Wang, Wentao; Yu, Zhiming; Song, Xiuxian; Yuan, Yongquan; Wu, Zaixing; Zhou, Peng; Cao, Xihua

2018-03-01

During the autumn season of 2014 (October-November), nutrient samples and nitrogen and oxygen isotope samples from the East China Sea (ECS) were collected and analyzed, and auxiliary physical parameters were determined. Distinctive high-salinity water column conditions with significant haloclines and pycnoclines similar to those observed during the spring were detected at the bottom of the ECS during the autumn. These water column conditions were attributed to the intrusion of the Kuroshio Subsurface Water (KSSW), which then separated into two currents, including the Offshore Kuroshio Branch Current (OKBC). Compared with spring, this intrusion transported higher phosphorus (P) concentrations onto the ECS continental shelf in autumn. However, according to multiple analyses, biogeochemical nitrogen processes are unable to explain the variations in the P concentrations (increase) while assuming that each distinctive water column is consistent. Identifying the water columns by their salinities and P concentrations revealed that the northern ECS water column was similar to the deep KSSW while the southern ECS water column was similar to the shallow KSSW. Therefore, we speculate that the distinctions among the seasonal variations of P-enriched water masses were attributable to the different intrusion positions of the Kuroshio. The shift of the KSSW intrusion location moved toward the northeast during the autumn relative to the spring. This shift, which was proved by the oceanic vortex data, caused the deeper KSSW water upwelled to the ECS and formed the OKBC, thereby supplying additional P during the autumn.

The Change in Black Sea Water Composition and Hydrology during Deglaciation from Multiproxy Reconstructions

NASA Astrophysics Data System (ADS)

Yanchilina, A.; Ryan, W. B. F.; McManus, J. F.

2014-12-01

This study presents a reconstruction of changes in the water column from the last glacial into the early Holocene using stable isotope, 87Sr/86Sr, 14C, and trace element ratios from mollusks from the shelf area and ostracods from the basin of the Black Sea. The stable isotope record is compared to a thoroughly U/Th dated terrestrial stable isotope record of a nearby cave, Sofular cave in northwestern Turkey. The combination of deep, surface, and terrestrial signals gives valuable insight towards the behavior of the lake water during the deglaciation in multiple dimensions, specifically the water column stratification and hydrological dynamics. The comparison of the stable isotope records of two independent proxies allows to make inferences on the changes in the 14C reservoir of the Black Sea-Lake. Results show that during the glacial period, water from the Black Sea-Lake was outflowing to the Sea of Marmara but the ventilation of the water column was weak as old 14C was not removed and allowed to accumulate giving the lake a large 14C reservoir age. A deglacial pulse of meltwater released from the Eurasian Fennoscandian pro-glacial lakes increased ventilation of the water column. This is seen in lighter δ18O and a spike in radiogenic 87Sr/86Sr in both deep and shallow parts of the water column. The dynamic ventilation and outflow of water into the Sea of Marmara continued until the onset of the Bolling/Allerod as the radiogenic 87Sr/86Sr was almost completely flushed out in a couple hundred years time. During the Bolling/Allerod and Preboreal warming, δ18O got heavier whereas the 87Sr/86Sr stayed constant and the 14C again accumulated and contributed to an older reservoir age. The Younger Dryas period, sandwiched in between the two warming periods, shows a return to glacial conditions in the δ13C and that the water outflowed to the Sea of Marmara as the δ18O only showed a slight change towards a more heavy value.

Asymmetric oceanic response to a hurricane: Deep water observations during Hurricane Isaac

NASA Astrophysics Data System (ADS)

Spencer, Laura J.; DiMarco, Steven F.; Wang, Zhankun; Kuehl, Joseph J.; Brooks, David A.

2016-10-01

The eye of Hurricane Isaac passed through the center of an array of six deep water water-column current meter moorings deployed in the northern Gulf of Mexico. The trajectory of the hurricane provided for a unique opportunity to quantify differences in the full water-column oceanic response to a hurricane to the left and right of the hurricane trajectory. Prior to the storm passage, relative vorticity on the right side of the hurricane was strongly negative, while on the left, relative vorticity was positive. This resulted in an asymmetry in the near-inertial frequencies oceanic response at depth and horizontally. A shift in the response to a slightly larger inertial frequencies ˜1.11f was observed and verified by theory. Additionally, the storm passage coincided with an asymmetric change in relative vorticity in the upper 1000 m, which persisted for ˜15 inertial periods. Vertical propagation of inertial energy was estimated at 29 m/d, while horizontal propagation at this frequency was approximately 5.7 km/d. Wavelet analysis showed two distinct subinertial responses, one with a period of 2-5 days and another with a period of 5-12 days. Analysis of the subinertial bands reveals that the spatial and temporal scales are shorter and less persistent than the near-inertial variance. As the array is geographically located near the site of the Deep Water Horizon oil spill, the spatial and temporal scales of response have significant implications for the fate, transport, and distribution of hydrocarbons following a deep water spill event.

Methane oxidation in Saanich Inlet during summer stratification

NASA Technical Reports Server (NTRS)

Ward, B. B.; Kilpatrick, K. A.; Wopat, A. E.; Minnich, E. C.; Lidstrom, M. E.

1989-01-01

Saanich Inlet, British Columbia, an fjord on the southeast coast of Vancouver Island, typically stratifies in summer, leading to the formation of an oxic-anoxic interface in the water column and accumulation of methane in the deep water. The results of methane concentration measurements in the water column of the inlet at various times throughout the summer months in 1983 are presented. Methane gradients and calculated diffusive fluxes across the oxic-anoxic interface increased as the summer progressed. Methane distribution and consumption in Saanich Inlet were studied in more detail during August 1986. At this time, a typical summer stratification with an oxic-anoxic interface around 140 m was present. At the interface, steep gradients in nutrient concentrations, bacterial abundance and methane concentration were observed. Methane oxidation was detected in the aerobic surface waters and in the anaerobic deep layer, but highest rates occurred in a narrow layer at the oxic-anoxic interface. Estimated methane oxidation rates were suffcient to consume 100 percent of the methane provided by diffusive flux from the anoxic layer. Methane oxidation is thus a mechanism whereby atmospheric flux from anoxic waters is minimized.

Reconstruct the past thermocline circulation in the Atlantic: calcification depths and Mg/Ca-temperature calibrations for 6 deep-dwelling planktonic foraminifera

NASA Astrophysics Data System (ADS)

Cleroux, C.; deMenocal, P.; Arbuszewski, J.; Linsley, B.

2012-04-01

The subtropical cells are shallow meridional overturning circulations driven by the atmospheric circulation and the deep thermohaline circulation. They connect the mid-latitude and the tropic, release latten heat to the atmosphere and impact climate on decadal to longer time scale. The upper water column temperature and salinity structures of the ocean reflect this circulation. We present proxies to study these past structures. We performed stable oxygen isotope (δ18O) and trace element ratio measurements on one surface-dwelling (G. ruber)1 and six deep-dwelling planktonic foraminifera species (N. dutertrei, G. inflata, G. tumida, G. truncatulinoides, G. hirsuta and G. crassaformis) on 66 coretops spanning from 35°N to 20°S along the Mid-Atlantic ridge. Comparison between measured δ18O and predicted δ18O (using water column temperature and seawater δ18O), shows that N. dutertrei, G. tumida, G. hirsuta and G. crassaformis keep the same apparent calcification depth along the transect (respectively: 125m, 150m, 700m and 800m). Calcification at two depth levels was also tested. For the six deep-dwelling species, we establish Mg/Ca-temperature calibrations with both atlas temperature at the calcification depth and isotopic temperature. We present Mg/Ca-temperature equations for species previously very poorly calibrated. The δ18O and temperature (Mg/Ca derived) on the six planktonic foraminifera species faithfully reproduce the modern water column structure of the upper 800 m depth, establishing promising proxies for past subsurface reconstruction. 1 Arbuszewski, J. J., P. B. deMenocal, A. Kaplan, and C. E. Farmer (2010), On the fidelity of shell-derived δ18Oseawater estimates, Earth and Planetary Science Letters, 300(3-4), 185-196.

Determining Which Dispersants Will Be Effective In Future Deepwater Oil Spills

EPA Science Inventory

Deepwater spills result in oil distributed from deep in the water column to the water surface. The objective of this study was to test eight of the available dispersants (including Corexit 9500A, which was used extensively on the 2010 Deepwater Horizon Spill) on South Louisiana C...

First Autonomous Bio-Optical Profiling Float in the Gulf of Mexico Reveals Dynamic Biogeochemistry in Deep Waters

PubMed Central

Green, Rebecca E.; Bower, Amy S.; Lugo-Fernández, Alexis

2014-01-01

Profiling floats equipped with bio-optical sensors well complement ship-based and satellite ocean color measurements by providing highly-resolved time-series data on the vertical structure of biogeochemical processes in oceanic waters. This is the first study to employ an autonomous profiling (APEX) float in the Gulf of Mexico for measuring spatiotemporal variability in bio-optics and hydrography. During the 17-month deployment (July 2011 to December 2012), the float mission collected profiles of temperature, salinity, chlorophyll fluorescence, particulate backscattering (bbp), and colored dissolved organic matter (CDOM) fluorescence from the ocean surface to a depth of 1,500 m. Biogeochemical variability was characterized by distinct depth trends and local “hot spots”, including impacts from mesoscale processes associated with each of the water masses sampled, from ambient deep waters over the Florida Plain, into the Loop Current, up the Florida Canyon, and eventually into the Florida Straits. A deep chlorophyll maximum (DCM) occurred between 30 and 120 m, with the DCM depth significantly related to the unique density layer ρ = 1023.6 (R2 = 0.62). Particulate backscattering, bbp, demonstrated multiple peaks throughout the water column, including from phytoplankton, deep scattering layers, and resuspension. The bio-optical relationship developed between bbp and chlorophyll (R2 = 0.49) was compared to a global relationship and could significantly improve regional ocean-color algorithms. Photooxidation and autochthonous production contributed to CDOM distributions in the upper water column, whereas in deep water, CDOM behaved as a semi-conservative tracer of water masses, demonstrating a tight relationship with density (R2 = 0.87). In the wake of the Deepwater Horizon oil spill, this research lends support to the use of autonomous drifting profilers as a powerful tool for consideration in the design of an expanded and integrated observing network for the Gulf of Mexico. PMID:24992646

The North Pacific Acoustic Laboratory deep-water acoustic propagation experiments in the Philippine Sea.

PubMed

Worcester, Peter F; Dzieciuch, Matthew A; Mercer, James A; Andrew, Rex K; Dushaw, Brian D; Baggeroer, Arthur B; Heaney, Kevin D; D'Spain, Gerald L; Colosi, John A; Stephen, Ralph A; Kemp, John N; Howe, Bruce M; Van Uffelen, Lora J; Wage, Kathleen E

2013-10-01

A series of experiments conducted in the Philippine Sea during 2009-2011 investigated deep-water acoustic propagation and ambient noise in this oceanographically and geologically complex region: (i) the 2009 North Pacific Acoustic Laboratory (NPAL) Pilot Study/Engineering Test, (ii) the 2010-2011 NPAL Philippine Sea Experiment, and (iii) the Ocean Bottom Seismometer Augmentation of the 2010-2011 NPAL Philippine Sea Experiment. The experimental goals included (a) understanding the impacts of fronts, eddies, and internal tides on acoustic propagation, (b) determining whether acoustic methods, together with other measurements and ocean modeling, can yield estimates of the time-evolving ocean state useful for making improved acoustic predictions, (c) improving our understanding of the physics of scattering by internal waves and spice, (d) characterizing the depth dependence and temporal variability of ambient noise, and (e) understanding the relationship between the acoustic field in the water column and the seismic field in the seafloor. In these experiments, moored and ship-suspended low-frequency acoustic sources transmitted to a newly developed distributed vertical line array receiver capable of spanning the water column in the deep ocean. The acoustic transmissions and ambient noise were also recorded by a towed hydrophone array, by acoustic Seagliders, and by ocean bottom seismometers.

Morphometry and mixing regime of a tropical lake: Lake Nova (Southeastern Brazil).

PubMed

Gonçalves, Monica A; Garcia, Fábio C; Barroso, Gilberto F

2016-09-01

Lake Nova (15.5 km2) is the second largest lake in the Lower Doce River Valley (Southeastern Brazil). A better understanding of ecosystem structure and functioning requires knowledge about lake morphometry, given that lake basin form influences water column stratification. The present study aims to contribute to the understanding of relationship between morphometry and mixing patterns of deep tropical lakes in Brazil. Water column profiles of temperature and dissolved oxygen were taken on four sampling sites along the lake major axis during 2011, 2012 and 2013. The bathymetric survey was carried out in July 2011, along 131.7 km of hydrographic tracks yield 51,692 depth points. Morphometric features of lake size and form factors describe the relative deep subrectangular elongated basin with maximum length of 15.7 km, shoreline development index 5.0, volume of 0.23 km3, volume development of 1.3, and maximum, mean and relative depths of 33.9 m, 14.7 m and 0.7 %, respectively. The deep basin induces a monomictic pattern, with thermal stratification during the wet/warm season associated with anoxic bottom waters (1/3 of lake volume), and mixing during dry and cool season. Based on in situ measurements of tributary river discharges, theoretical retention time (RT) has been estimated in 13.4 years. The morphometry of Lake Nova promote long water RT and the warm monomictic mixing pattern, which is in accordance to the deep tropical lakes in Brazil.

High latitude control on tropical North Pacific thermocline oxygen via deep ocean circulation: implications for atmospheric CO2 and N2O concentrations over TERM1.

NASA Astrophysics Data System (ADS)

Jaccard, S. L.; Eric, G. D.; Haug, G. H.; Sigman, D. M.; Francois, R.; Dulski, P.

2006-12-01

Low-latitude Pacific Ocean records of past changes in productivity and denitrification have often been ascribed to local processes, including changes in local wind forcing, with some recent hypothesis calling on remote control by thermocline ventilation processes. Here we show that deep thermohaline circulation, a fundamentally high-latitude process, is also linked to the low-latitude thermocline biogeochemistry through its impact on nutrient and dissolved oxygen distributions. We present new, multi-proxy evidence from sediment records from the abyssal subarctic North Pacific, including sedimentary redox-sensitive trace metal distribution, Th-normalized biogenic barium, calcium carbonate, and opal mass accumulation rates, and bulk sedimentary 15N measurements. These proxies show that the abyss was significantly depleted in oxygen, and low 13C, all consistent with high DIC concentrations. Meanwhile, above a deep chemical divide, the overlying waters were relatively well-oxygenated and nutrient-poor. At the mid-point of the deglaciation, the glacial deep water mass dissipated upwards in the water column, releasing deeply-sequestered CO2 to the atmosphere and shifting nutrients into the thermocline. The flux of regenerated nutrients to the sunlit surface ocean associated with this breakdown of the deep water mass enhanced primary productivity throughout the subarctic Pacific, while records from lower latitudes of the North Pacific show a parallel boom in export production. The accelerated flux of organic matter from the surface contributed towards an intensification of the thermocline oxygen minimum zone, accelerating denitrification in the Eastern (sub)tropical North Pacific and the production of nitrous oxide. These observations, taken together with our evidence for changes in the deep North Pacific, suggest that the flux of nutrients from the deep North Pacific into the upper water column increased at the end of the ice age. This release may have occurred via the polar oceans, which today feed nutrients into the lower latitude thermocline. Alternatively, it may have occurred directly, by vertical mixing in the ocean interior. Regardless of the mechanism, this transition led to the modern configuration of a relatively well-ventilated deep sea, overlain by an oxygen minimum.

Microbial ecology of deep-sea hypersaline anoxic basins.

PubMed

Merlino, Giuseppe; Barozzi, Alan; Michoud, Grégoire; Ngugi, David Kamanda; Daffonchio, Daniele

2018-07-01

Deep hypersaline anoxic basins (DHABs) are unique water bodies occurring within fractures at the bottom of the sea, where the dissolution of anciently buried evaporites created dense anoxic brines that are separated by a chemocline/pycnocline from the overlying oxygenated deep-seawater column. DHABs have been described in the Gulf of Mexico, the Mediterranean Sea, the Black Sea and the Red Sea. They are characterized by prolonged historical separation of the brines from the upper water column due to lack of mixing and by extreme conditions of salinity, anoxia, and relatively high hydrostatic pressure and temperatures. Due to these combined selection factors, unique microbial assemblages thrive in these polyextreme ecosystems. The topological localization of the different taxa in the brine-seawater transition zone coupled with the metabolic interactions and niche adaptations determine the metabolic functioning and biogeochemistry of DHABs. In particular, inherent metabolic strategies accompanied by genetic adaptations have provided insights on how prokaryotic communities can adapt to salt-saturated conditions. Here, we review the current knowledge of the diversity, genomics, metabolisms and ecology of prokaryotes in DHABs.

Glacial - interglacial changes of northwest Pacific stratification, inferred from deep and shallow living radiolarians

NASA Astrophysics Data System (ADS)

Hays, J. D.

2009-12-01

Shallow (0-200m) and deep (200 to1000m) living radiolarian flux is used to measure past production from within discrete intervals of the ocean’s water column. Deep-living faunas can also be used as proxies for export production, for they remineralize it and respond geographically and temporally to varying export. Few members of the mesopelagic community leave a fossil record, but of those that do, radiolarians are the most abundant and diverse group. In northwest Pacific late Pleistocene (glacial) sediments, deep-living radiolarian flux dominates over shallow-living flux, but the reverse is true in Holocene sediments, with the dramatic dominance change occurring across the Pleistocene-Holocene boundary. Changing primary productivity can’t cause these flux changes, for shallow-living faunas have access to the same carbon flux as do deep-living faunas, but rather they signal a major reorganization of the radiolarian fauna within the water column and suggest greater glacial than Holocene carbon export. In the Holocene world-ocean, the only region where deep-living radiolarian flux dominates over shallow-living flux is in the Sea of Okhotsk, suggesting environmental similarities between this sea and the northwest Pacific. In winter, cold Siberian air chills the upper hundred meters of the Sea of Okhotsk, promoting the spread of vast sea ice fields. High productivity in a thin (10-15m) summer mixed layer depletes nutrients Between 15 and about 150m exists a layer of cold (-1 to 0 degrees C.) intermediate water, within which radiolarian concentrations are low, but these concentrations increase between 200 and 500m in warmer intermediate water (Nimmergut and Abelmann, 2002). This radiolarian stratification results in greater deep- than shallow-living radiolarian flux to the sea floor. A similar water structure in the glacial northwest Pacific is the probable cause of similar flux patterns between the glacial northwest Pacific and Holocene Sea of Okhotsk. If so then cold glacial northwest Pacific intermediate water promoted the southward spread of sea ice. This inference is supported by the near coincidence of the southern limit of deep-living species dominated glacial sediments and extensive ice rafting. It also explains nutrient depleted glacial northwest Pacific surface waters inferred from isotopic data.

North Atlantic deep water formation and AMOC in CMIP5 models

NASA Astrophysics Data System (ADS)

Heuzé, Céline

2017-07-01

Deep water formation in climate models is indicative of their ability to simulate future ocean circulation, carbon and heat uptake, and sea level rise. Present-day temperature, salinity, sea ice concentration and ocean transport in the North Atlantic subpolar gyre and Nordic Seas from 23 CMIP5 (Climate Model Intercomparison Project, phase 5) models are compared with observations to assess the biases, causes and consequences of North Atlantic deep convection in models. The majority of models convect too deep, over too large an area, too often and too far south. Deep convection occurs at the sea ice edge and is most realistic in models with accurate sea ice extent, mostly those using the CICE model. Half of the models convect in response to local cooling or salinification of the surface waters; only a third have a dynamic relationship between freshwater coming from the Arctic and deep convection. The models with the most intense deep convection have the warmest deep waters, due to a redistribution of heat through the water column. For the majority of models, the variability of the Atlantic Meridional Overturning Circulation (AMOC) is explained by the volumes of deep water produced in the subpolar gyre and Nordic Seas up to 2 years before. In turn, models with the strongest AMOC have the largest heat export to the Arctic. Understanding the dynamical drivers of deep convection and AMOC in models is hence key to realistically forecasting Arctic oceanic warming and its consequences for the global ocean circulation, cryosphere and marine life.

Effects of Hydrothermal Scavenging of 230Th in the Eastern Equatorial Pacific Translated to the Deep Waters of the Central Equatorial Pacific

NASA Astrophysics Data System (ADS)

Lopez, G. I.; Marcantonio, F.

2014-12-01

Although we were not involved in the 2013 US GEOTRACES zonal transect in the eastern tropical south Pacific, our results in the central tropical Pacific are complementary in that they shed light on the extensive hydrothermal plume emanating from the East Pacific Rise (EPR). Specifically, we have analyzed dissolved 230Th concentrations at high-resolution within the water column at two locations (ML1208-12CTD; 8° 19.989' N, 159° 18.000' W, and ML1208-03CTD; 00° 13.166' S, 155° 57.668' W) sampled as part of a cruise to the Line Islands. The pattern of the dissolved 230Th concentration profile at 8°N is essentially linear from the surface to 2000 m and generally follows a reversible scavenging model. However, from 2000 m to 3000 m, the dissolved 230Th concentrations are constant, before linearly increasing again from 3000 m to the bottom. At this site dissolved 230Th concentrations range from 1.06 fg/kg at 100 m to 55.15 fg/kg at 4600 m. At the equator, dissolved 230Th concentrations are slightly lower, and range from undetectable at 25 m to 19.07 fg/kg at 3038 m. A nearly indistinguishable pattern in dissolved 230Th concentrations occurs in the profile at the equator compared to that from 8°N. The deep-water deviation from linearity between 2 and 3 km in the 230Th profiles (lower concentrations than expected) at both sites coincides well with the interval of the water column which has the highest concentrations of 3He. This 3He-rich signal has been traced to hydrothermal plumes from the EPR, thousands of km away (Lupton et al., 1998). We hypothesize that the lower concentrations of 230Th in deep waters of the central equatorial Pacific are a result of: 1) scavenging of water-column 230Th by Fe-Mn particulates contained within the EPR hydrothermal plume, and 2) lateral export of these 230Th-deficient deep waters approximately 7000 km westward. We will discuss the implications that the transport of this signature across vast distances has on water residence and transport times. Reference: Lupton, J. (1998) J. Geophys. Res. 103, 15,853-15,868.

Diversity of active aerobic methanotrophs along depth profiles of arctic and subarctic lake water column and sediments

PubMed Central

He, Ruo; Wooller, Matthew J; Pohlman, John W; Quensen, John; Tiedje, James M; Leigh, Mary Beth

2012-01-01

Methane (CH4) emitted from high-latitude lakes accounts for 2–6% of the global atmospheric CH4 budget. Methanotrophs in lake sediments and water columns mitigate the amount of CH4 that enters the atmosphere, yet their identity and activity in arctic and subarctic lakes are poorly understood. We used stable isotope probing (SIP), quantitative PCR (Q-PCR), pyrosequencing and enrichment cultures to determine the identity and diversity of active aerobic methanotrophs in the water columns and sediments (0–25 cm) from an arctic tundra lake (Lake Qalluuraq) on the north slope of Alaska and a subarctic taiga lake (Lake Killarney) in Alaska's interior. The water column CH4 oxidation potential for these shallow (∼2 m deep) lakes was greatest in hypoxic bottom water from the subarctic lake. The type II methanotroph, Methylocystis, was prevalent in enrichment cultures of planktonic methanotrophs from the water columns. In the sediments, type I methanotrophs (Methylobacter, Methylosoma and Methylomonas) at the sediment-water interface (0–1 cm) were most active in assimilating CH4, whereas the type I methanotroph Methylobacter and/or type II methanotroph Methylocystis contributed substantially to carbon acquisition in the deeper (15–20 cm) sediments. In addition to methanotrophs, an unexpectedly high abundance of methylotrophs also actively utilized CH4-derived carbon. This study provides new insight into the identity and activity of methanotrophs in the sediments and water from high-latitude lakes. PMID:22592821

Diversity of active aerobic methanotrophs along depth profiles of arctic and subarctic lake water column and sediments

USGS Publications Warehouse

He, Ruo; Wooller, Matthew J.; Pohlman, John W.; Quensen, John; Tiedje, James M.; Leigh, Mary Beth

2012-01-01

Methane (CH4) emitted from high-latitude lakes accounts for 2–6% of the global atmospheric CH4 budget. Methanotrophs in lake sediments and water columns mitigate the amount of CH4 that enters the atmosphere, yet their identity and activity in arctic and subarctic lakes are poorly understood. We used stable isotope probing (SIP), quantitative PCR (Q-PCR), pyrosequencing and enrichment cultures to determine the identity and diversity of active aerobic methanotrophs in the water columns and sediments (0–25 cm) from an arctic tundra lake (Lake Qalluuraq) on the north slope of Alaska and a subarctic taiga lake (Lake Killarney) in Alaska's interior. The water column CH4 oxidation potential for these shallow (~2m deep) lakes was greatest in hypoxic bottom water from the subarctic lake. The type II methanotroph, Methylocystis, was prevalent in enrichment cultures of planktonic methanotrophs from the water columns. In the sediments, type I methanotrophs (Methylobacter, Methylosoma and Methylomonas) at the sediment-water interface (0–1 cm) were most active in assimilating CH4, whereas the type I methanotroph Methylobacter and/or type II methanotroph Methylocystis contributed substantially to carbon acquisition in the deeper (15–20 cm) sediments. In addition to methanotrophs, an unexpectedly high abundance of methylotrophs also actively utilized CH4-derived carbon. This study provides new insight into the identity and activity of methanotrophs in the sediments and water from high-latitude lakes.

Comparison of Niskin vs. in situ approaches for analysis of gene expression in deep Mediterranean Sea water samples

NASA Astrophysics Data System (ADS)

Edgcomb, V. P.; Taylor, C.; Pachiadaki, M. G.; Honjo, S.; Engstrom, I.; Yakimov, M.

2016-07-01

Obtaining an accurate picture of microbial processes occurring in situ is essential for our understanding of marine biogeochemical cycles of global importance. Water samples are typically collected at depth and returned to the sea surface for processing and downstream experiments. Metatranscriptome analysis is one powerful approach for investigating metabolic activities of microorganisms in their habitat and which can be informative for determining responses of microbiota to disturbances such as the Deepwater Horizon oil spill. For studies of microbial processes occurring in the deep sea, however, sample handling, pressure, and other changes during sample recovery can subject microorganisms to physiological changes that alter the expression profile of labile messenger RNA. Here we report a comparison of gene expression profiles for whole microbial communities in a bathypelagic water column sample collected in the Eastern Mediterranean Sea using Niskin bottle sample collection and a new water column sampler for studies of marine microbial ecology, the Microbial Sampler - In Situ Incubation Device (MS-SID). For some taxa, gene expression profiles from samples collected and preserved in situ were significantly different from potentially more stressful Niskin sampling and preservation on deck. Some categories of transcribed genes also appear to be affected by sample handling more than others. This suggests that for future studies of marine microbial ecology, particularly targeting deep sea samples, an in situ sample collection and preservation approach should be considered.

A major change in North Atlantic deep water circulation during the Early Pleistocene transition 1.6 million years ago

NASA Astrophysics Data System (ADS)

Khélifi, N.; Frank, M.

2013-12-01

The global ocean-climate system has been highly sensitive to the formation and advection of deep water in the North Atlantic but its evolution over the Pliocene-Pleistocene global cooling is not fully understood. In particular, changes in the sources and mixing of prevailing deep waters are not well constrained. Here we present new records of the bottom-water radiogenic neodymium isotope (ϵNd) variability obtained from three DSDP/ODP sites at water depths between 2100 and 5000 m in the Northeast Atlantic to reconstruct changes in deep water circulation over the past 4 million years. Prior to 1.6 million years ago (Ma), we find ϵNd values primarily oscillating between -9 and -11 at all sites, consistent with enhanced vertical mixing of water masses. At 1.6 Ma, the ϵNd signatures synchronously shifted to less radiogenic values around -12 at different water depths and water mass signatures gradually became more distinct. Since then values and amplitudes of "glacial/interglacial" ϵNd oscillations have been similar to the Late Quaternary at each site. This change 1.6 Ma reflects a major reorganization of deep water circulation in the Northeast Atlantic towards a more stratified water column with distinct water masses accompanying the enhanced response of climate to the Earth's obliquity forcing during the Early Pleistocene transition.

Spatial and temporal variation of papyrus root mat thickness and water storage in a tropical wetland system.

PubMed

Kayendeke, Ellen Jessica; Kansiime, Frank; French, Helen K; Bamutaze, Yazidhi

2018-06-18

Papyrus wetlands are predominant in permanently inundated areas of tropical Sub Saharan Africa (SSA) and offer both provisioning and regulatory services. Although a wealth of literature exists on wetland functions, the seasonal behaviour of the papyrus mat and function in water storage has received less attention. The objective of this study was to assess the response of the papyrus root mat to changing water levels in a tropical wetland system in Eastern Uganda. We delineated seven transects through a section of a wetland system and mapped wetland bathymetry along these transects. We used three transects to measure spatial and temporal changes in mat thickness and free water column, and to monitor variations in total depth during two seasons. The free water column increased across all transects in the wet season. However, changes in the mat thickness varied spatially and were influenced by the rate of increase of the free water column as well as wetland bathymetry. The proportion of mat compression was higher at the shallow end of the wetland (83%) compared to the deep end (67%). There was a significant negative correlation between changes in free water column and papyrus mat thickness (r = -0.85, p = 000). Therefore, the mat compresses in response to increase in free water column, which increases the ratio of the free water column to root mat thickness. Hence, the wetland accommodates excess water during rainy seasons. Water depth varied from 1.5 m to 2.1 m during the monitoring period, corresponding to a water storage of 61,597 m 3 and 123,355 m 3 respectively. This means a 50% change in water volume for the studied wetland section. This water regulatory function mitigates severity of floods downstream, but the stored water is also useful to the surrounding communities for wetland-edge farm irrigation during dry seasons. Copyright © 2018 Elsevier B.V. All rights reserved.

Bottom Interaction in Ocean Acoustic Propagation

DTIC Science & Technology

2013-09-30

critical depth). What is the relationship between the seismic (ground motion) noise on the seafloor and the acoustic noise in the water column? What...detections and observations on non-traditional sensors such as deep boreholes in the seafloor in water depths well- below the critical depth. Third...press). "Estimating the horizontal 4 and vertical direction-of-arrival of water-borne seismic signals in the northern Philippine Sea," J. Acoust

Dynamic morphology of gas hydrate on a methane bubble in water: Observations and new insights for hydrate film models

NASA Astrophysics Data System (ADS)

Warzinski, Robert P.; Lynn, Ronald; Haljasmaa, Igor; Leifer, Ira; Shaffer, Frank; Anderson, Brian J.; Levine, Jonathan S.

2014-10-01

Predicting the fate of subsea hydrocarbon gases escaping into seawater is complicated by potential formation of hydrate on rising bubbles that can enhance their survival in the water column, allowing gas to reach shallower depths and the atmosphere. The precise nature and influence of hydrate coatings on bubble hydrodynamics and dissolution is largely unknown. Here we present high-definition, experimental observations of complex surficial mechanisms governing methane bubble hydrate formation and dissociation during transit of a simulated oceanic water column that reveal a temporal progression of deep-sea controlling mechanisms. Synergistic feedbacks between bubble hydrodynamics, hydrate morphology, and coverage characteristics were discovered. Morphological changes on the bubble surface appear analogous to macroscale, sea ice processes, presenting new mechanistic insights. An inverse linear relationship between hydrate coverage and bubble dissolution rate is indicated. Understanding and incorporating these phenomena into bubble and bubble plume models will be necessary to accurately predict global greenhouse gas budgets for warming ocean scenarios and hydrocarbon transport from anthropogenic or natural deep-sea eruptions.

A comparative molecular analysis of water-filled limestone sinkholes in north-eastern Mexico.

PubMed

Sahl, Jason W; Gary, Marcus O; Harris, J Kirk; Spear, John R

2011-01-01

Sistema Zacatón in north-eastern Mexico is host to several deep, water-filled, anoxic, karstic sinkholes (cenotes). These cenotes were explored, mapped, and geochemically and microbiologically sampled by the autonomous underwater vehicle deep phreatic thermal explorer (DEPTHX). The community structure of the filterable fraction of the water column and extensive microbial mats that coat the cenote walls was investigated by comparative analysis of small-subunit (SSU) 16S rRNA gene sequences. Full-length Sanger gene sequence analysis revealed novel microbial diversity that included three putative bacterial candidate phyla and three additional groups that showed high intra-clade distance with poorly characterized bacterial candidate phyla. Limited functional gene sequence analysis in these anoxic environments identified genes associated with methanogenesis, sulfate reduction and anaerobic ammonium oxidation. A directed, barcoded amplicon, multiplex pyrosequencing approach was employed to compare ∼100,000 bacterial SSU gene sequences from water column and wall microbial mat samples from five cenotes in Sistema Zacatón. A new, high-resolution sequence distribution profile (SDP) method identified changes in specific phylogenetic types (phylotypes) in microbial mats at varied depths; Mantel tests showed a correlation of the genetic distances between mat communities in two cenotes and the geographic location of each cenote. Community structure profiles from the water column of three neighbouring cenotes showed distinct variation; statistically significant differences in the concentration of geochemical constituents suggest that the variation observed in microbial communities between neighbouring cenotes are due to geochemical variation. © 2010 Society for Applied Microbiology and Blackwell Publishing Ltd.

Changes in production and respiration during a spring phytoplankton bloom in San Francisco Bay, California, USA: Implications for net ecosystem metabolism

USGS Publications Warehouse

Caffrey, J.M.; Cloern, J.E.; Grenz, C.

1998-01-01

We present results of an intensive sampling program designed to measure weekly changes in ecosystem respiration (oxygen consumption in the water column and sediments) around the 1996 spring bloom in South San Francisco Bay, California, USA. Measurements were made at a shallow site (2 m, where mean photic depth was 60% of the water column height) and a deep site (15 m, mean photic depth was only 20% of the water column). We also estimated phytoplankton primary production weekly at both sites to develop estimates of net oxygen flux as the sum of pelagic production (PP), pelagic respiration (PR) and benthic respiration (BR). Over the 14 wk period from February 5 to May 14, PP ranged from 2 to 210, PR from 9 to 289, and BR from 0.1 to 48 mmol O2 m-2 d-1, illustrating large variability of estuarine oxygen fluxes at the weekly time scale. Pelagic production exceeded total respiration at the shallow site, but not at the deep site, demonstrating that the shallow domains are net autotrophic but the deep domains are net heterotrophic, even during the period of the spring bloom. If we take into account the potential primary production by benthic microalgae, the estuary as a whole is net autotrophic during spring, net heterotrophic during the nonbloom seasons, and has a balanced net metabolism over a full annual period. The seasonal shift from net autotrophy to heterotrophy during the transition from spring to summer was accompanied by a large shift from dominance by pelagic respiration to dominance by benthic respiration. This suggests that changes in net ecosystem metabolism can reflect changes in the pathways of energy flow in shallow coastal ecosystems.

Ballasting by cryogenic gypsum enhances carbon export in a Phaeocystis under-ice bloom.

PubMed

Wollenburg, J E; Katlein, C; Nehrke, G; Nöthig, E-M; Matthiessen, J; Wolf-Gladrow, D A; Nikolopoulos, A; Gázquez-Sanchez, F; Rossmann, L; Assmy, P; Babin, M; Bruyant, F; Beaulieu, M; Dybwad, C; Peeken, I

2018-05-16

Mineral ballasting enhances carbon export from the surface to the deep ocean; however, little is known about the role of this process in the ice-covered Arctic Ocean. Here, we propose gypsum ballasting as a new mechanism that likely facilitated enhanced vertical carbon export from an under-ice phytoplankton bloom dominated by the haptophyte Phaeocystis. In the spring 2015 abundant gypsum crystals embedded in Phaeocystis aggregates were collected throughout the water column and on the sea floor at a depth below 2 km. Model predictions supported by isotopic signatures indicate that 2.7 g m -2 gypsum crystals were formed in sea ice at temperatures below -6.5 °C and released into the water column during sea ice melting. Our finding indicates that sea ice derived (cryogenic) gypsum is stable enough to survive export to the deep ocean and serves as an effective ballast mineral. Our findings also suggest a potentially important and previously unknown role of Phaeocystis in deep carbon export due to cryogenic gypsum ballasting. The rapidly changing Arctic sea ice regime might favour this gypsum gravity chute with potential consequences for carbon export and food partitioning between pelagic and benthic ecosystems.

The diversity of PAH-degrading bacteria in a deep-sea water column above the Southwest Indian Ridge.

PubMed

Yuan, Jun; Lai, Qiliang; Sun, Fengqin; Zheng, Tianling; Shao, Zongze

2015-01-01

The bacteria involved in organic pollutant degradation in pelagic deep-sea environments are largely unknown. In this report, the diversity of polycyclic aromatic hydrocarbon (PAH)-degrading bacteria was analyzed in deep-sea water on the Southwest Indian Ridge (SWIR). After enrichment with a PAH mixture (phenanthrene, anthracene, fluoranthene, and pyrene), nine bacterial consortia were obtained from depths of 3946-4746 m. While the consortia degraded all four PAHs when supplied in a mixture, when PAHs were tested individually, only phenanthrene supported growth. Thus, degradation of the PAH mixture reflected a cometabolism of anthracene, fluoranthene, and pyrene with phenanthrene. Further, both culture-dependent and independent methods revealed many new bacteria involved in PAH degradation. Specifically, the alpha and gamma subclasses of Proteobacteria were confirmed as the major groups within the communities. Additionally, Actinobacteria, the CFB group and Firmicutes were detected. Denaturing Gradient Gel Electrophoresis (DGGE) analysis showed that bacteria closely affiliated with Alcanivorax, Novosphingobium, and Rhodovulum occurred most frequently in different PAH-degrading consortia. By using general heterotrophic media, 51 bacteria were isolated from the consortia and of these 34 grew with the PAH mixture as a sole carbon source. Of these, isolates most closely related to Alterierythrobacter, Citricella, Erythrobacter, Idiomarina, Lutibacterium, Maricaulis, Marinobacter, Martelella, Pseudidiomarina, Rhodobacter, Roseovarius, Salipiger, Sphingopyxis, and Stappia were found to be PAH degraders. To the best of our knowledge, this is the first time these bacteria have been identified in this context. In summary, this report revealed significant diversity among the PAH-degrading bacteria in the deep-sea water column. These bacteria may play a role in PAH removal in deep-sea environments.

The diversity of PAH-degrading bacteria in a deep-sea water column above the Southwest Indian Ridge

PubMed Central

Yuan, Jun; Lai, Qiliang; Sun, Fengqin; Zheng, Tianling; Shao, Zongze

2015-01-01

The bacteria involved in organic pollutant degradation in pelagic deep-sea environments are largely unknown. In this report, the diversity of polycyclic aromatic hydrocarbon (PAH)-degrading bacteria was analyzed in deep-sea water on the Southwest Indian Ridge (SWIR). After enrichment with a PAH mixture (phenanthrene, anthracene, fluoranthene, and pyrene), nine bacterial consortia were obtained from depths of 3946–4746 m. While the consortia degraded all four PAHs when supplied in a mixture, when PAHs were tested individually, only phenanthrene supported growth. Thus, degradation of the PAH mixture reflected a cometabolism of anthracene, fluoranthene, and pyrene with phenanthrene. Further, both culture-dependent and independent methods revealed many new bacteria involved in PAH degradation. Specifically, the alpha and gamma subclasses of Proteobacteria were confirmed as the major groups within the communities. Additionally, Actinobacteria, the CFB group and Firmicutes were detected. Denaturing Gradient Gel Electrophoresis (DGGE) analysis showed that bacteria closely affiliated with Alcanivorax, Novosphingobium, and Rhodovulum occurred most frequently in different PAH-degrading consortia. By using general heterotrophic media, 51 bacteria were isolated from the consortia and of these 34 grew with the PAH mixture as a sole carbon source. Of these, isolates most closely related to Alterierythrobacter, Citricella, Erythrobacter, Idiomarina, Lutibacterium, Maricaulis, Marinobacter, Martelella, Pseudidiomarina, Rhodobacter, Roseovarius, Salipiger, Sphingopyxis, and Stappia were found to be PAH degraders. To the best of our knowledge, this is the first time these bacteria have been identified in this context. In summary, this report revealed significant diversity among the PAH-degrading bacteria in the deep-sea water column. These bacteria may play a role in PAH removal in deep-sea environments. PMID:26379634

Basin-wide N2 fixation in the deep waters of the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Benavides, Mar; Bonnet, Sophie; Hernández, Nauzet; Martínez-Pérez, Alba María.; Nieto-Cid, Mar; Álvarez-Salgado, Xosé Antón; Baños, Isabel; Montero, María. F.; Mazuecos, Ignacio P.; Gasol, Josep M.; Osterholz, Helena; Dittmar, Thorsten; Berman-Frank, Ilana; Arístegui, Javier

2016-06-01

Recent findings indicate that N2 fixation is significant in aphotic waters, presumably due to heterotrophic diazotrophs depending on organic matter for their nutrition. However, the relationship between organic matter and heterotrophic N2 fixation remains unknown. Here we explore N2 fixation in the deep chlorophyll maximum and underneath deep waters across the whole Mediterranean Sea and relate it to organic matter composition, characterized by optical and molecular methods. Our N2 fixation rates were in the range of those previously reported for the euphotic zone of the Mediterranean Sea (up to 0.43 nmol N L-1 d-1) and were significantly correlated to the presence of relatively labile organic matter with fluorescence and molecular formula properties representative for peptides and unsaturated aliphatics and associated with the presence of more oxygenated ventilated water masses. Finally, and despite that the aphotic N2 fixation contributes largely to total water column diazotrophic activity (>50%), its contribution to overall nitrogen inputs to the basin is negligible (<0.5%).

Overview of the limnology of crater lake

USGS Publications Warehouse

Larson, G.L.

1996-01-01

Crater Lake occupies the collapsed caldera of volcanic Mount Mazama in Crater Lake National Park, Oregon. It is the deepest lake (589 m) in the United States and the 7th deepest lake in the world. The water column mixes to a depth of about 200 m in winter and spring from wind energy and cooling. The deep lake is mixed in winter and early spring each year when relatively cold water near the surface sinks and exchanges positions with water in the deep basins of the lake. The lake becomes thermally stratified in summer and early fall. The metalimnion extends to a depth of about 100 m; thus most of the water column is a cold hypolimnion. Secchi disk clarity measurements typically are in the upper-20-m range to the low-30-m range in summer and early fall. Concentrations of nutrients are low, although conductivity is relatively high owing to the inflow of hydrothermal fluids. Total chlorophyll is low in concentration, but typically maximal at a depth of 120 m during periods of thermal stratification. Primary production also is low, with the maximum levels occurring between the depth of 40 and 80 m. Phytoplankton taxa are spatially segregated from each other within the water column to a depth of 200 m in summer and early fall. The same generalization applies to the Zooplankton taxa. Water level, clarity, concentrations of total chlorophyll, primary production, and abundances of zooplankton and introduced kokanee salmon exhibit long-term fluctuations. Based primarily on a recent 10-year study of the lake, the lake is considered to be pristine, except for the consequences of fish introductions. ?? 1996 by the Northwest Scientific Association. All rights reserved.

Overview of the limnology of Crater Lake

USGS Publications Warehouse

Larson, Gary L.

1996-01-01

Crater Lake occupies the collapsed caldera of volcanic Mount Mazama in Crater Lake National Park, Oregon. It is the deepest lake (589 m) in the United States and the 7th deepest lake in the world. The water column mixes to a depth of about 200 m in winter and spring from wind energy and cooling. The deep lake is mixed in winter and early spring each year when relatively cold water near the surface sinks and exchanges positions with water in the deep basins of the lake. The lake becomes thermally stratified in summer and early fall. The metalimnion extends to a depth of about 100 m; thus most of the water column is a cold hypolimnion. Secchi disk clarity measurements typically are in the upper-20-m range to the low-30-m range in summer and early fall. Concentrations of nutrients are low, although conductivity is relatively high owing to the inflow of hydrothermal fluids. Total chlorophyll is low in concentration, but typically maximal at a depth of 120 m during periods of thermal stratification. Primary production also is low, with the maximum levels occurring between the depth of 40 and 80 m. Phytoplankton taxa are spatially segregated from each other within the water column to a depth of 200 m in summer and early fall. The same generalization applies to the zooplankton taxa. Water level, clarity, concentrations of total chlorophyll, primary production, and abundances of zooplankton and introduced kokanee salmon exhibit long-term fluctuations. Based primarily on a recent 10-year study of the lake, the lake is considered to be pristine, except for the consequences of fish introductions.

Recent Warming of Lake Kivu

PubMed Central

Katsev, Sergei; Aaberg, Arthur A.; Crowe, Sean A.; Hecky, Robert E.

2014-01-01

Lake Kivu in East Africa has gained notoriety for its prodigious amounts of dissolved methane and dangers of limnic eruption. Being meromictic, it is also expected to accumulate heat due to rising regional air temperatures. To investigate the warming trend and distinguish between atmospheric and geothermal heating sources, we compiled historical temperature data, performed measurements with logging instruments, and simulated heat propagation. We also performed isotopic analyses of water from the lake's main basin and isolated Kabuno Bay. The results reveal that the lake surface is warming at the rate of 0.12°C per decade, which matches the warming rates in other East African lakes. Temperatures increase throughout the entire water column. Though warming is strongest near the surface, warming rates in the deep waters cannot be accounted for solely by propagation of atmospheric heat at presently assumed rates of vertical mixing. Unless the transport rates are significantly higher than presently believed, this indicates significant contributions from subterranean heat sources. Temperature time series in the deep monimolimnion suggest evidence of convection. The progressive deepening of the depth of temperature minimum in the water column is expected to accelerate the warming in deeper waters. The warming trend, however, is unlikely to strongly affect the physical stability of the lake, which depends primarily on salinity gradient. PMID:25295730

Recent warming of lake Kivu.

PubMed

Katsev, Sergei; Aaberg, Arthur A; Crowe, Sean A; Hecky, Robert E

2014-01-01

Lake Kivu in East Africa has gained notoriety for its prodigious amounts of dissolved methane and dangers of limnic eruption. Being meromictic, it is also expected to accumulate heat due to rising regional air temperatures. To investigate the warming trend and distinguish between atmospheric and geothermal heating sources, we compiled historical temperature data, performed measurements with logging instruments, and simulated heat propagation. We also performed isotopic analyses of water from the lake's main basin and isolated Kabuno Bay. The results reveal that the lake surface is warming at the rate of 0.12°C per decade, which matches the warming rates in other East African lakes. Temperatures increase throughout the entire water column. Though warming is strongest near the surface, warming rates in the deep waters cannot be accounted for solely by propagation of atmospheric heat at presently assumed rates of vertical mixing. Unless the transport rates are significantly higher than presently believed, this indicates significant contributions from subterranean heat sources. Temperature time series in the deep monimolimnion suggest evidence of convection. The progressive deepening of the depth of temperature minimum in the water column is expected to accelerate the warming in deeper waters. The warming trend, however, is unlikely to strongly affect the physical stability of the lake, which depends primarily on salinity gradient.

Genetic perspectives on marine biological invasions

EPA Science Inventory

The last few decades have seen increasing concern for the state of the ocean's biota. A growing list of stressors has led to extensive changes in the distribution and composition of species on the world's coastlines, in the ocean's water column, and even on the deep sea floor. ...

Visual observations of the vertical distribution of plankton throughout the water column above Broken Spur vent field, Mid-Atlantic Ridge

NASA Astrophysics Data System (ADS)

Vereshchaka, A. L.; Vinogradov, G. M.

1999-09-01

Visual observations were made in September 1997 during the 39 cruise of R/V "Akademik Mstislav Keldysh" with 2 deep-sea manned submersibles "Mir" aboard. During 4 dives the following plankton countings were made: 3 vertical throughout the water column during the day, 2 vertical in the upper 1000 m at night, and 1 oblique in the plume area during the day. Biomass profiles are represented for each dive for all abundant animal groups: copepods, euphausiids+decapods+mysids, chaetognaths, medusae, ctenophores, siphonophores, cyclothones, myctophides, radiolarians, and the total zooplankton. Plankton distribution shows 2 aggregations, one within the main pycnocline and the other near the plume; Gelatinous animals and radiolarians dominate in both aggregations by biomass and make a significant contribution to the plankton biomass throughout the water column. Oblique counting indicates the presence of aggregations of animals near the upper and lower borders of the plume and biomass depletion within the plume core.

Observations of open-ocean deep convection in the northwestern Mediterranean Sea: Seasonal and interannual variability of mixing and deep water masses for the 2007-2013 Period

NASA Astrophysics Data System (ADS)

Houpert, L.; Durrieu de Madron, X.; Testor, P.; Bosse, A.; D'Ortenzio, F.; Bouin, M. N.; Dausse, D.; Le Goff, H.; Kunesch, S.; Labaste, M.; Coppola, L.; Mortier, L.; Raimbault, P.

2016-11-01

We present here a unique oceanographic and meteorological data set focus on the deep convection processes. Our results are essentially based on in situ data (mooring, research vessel, glider, and profiling float) collected from a multiplatform and integrated monitoring system (MOOSE: Mediterranean Ocean Observing System on Environment), which monitored continuously the northwestern Mediterranean Sea since 2007, and in particular high-frequency potential temperature, salinity, and current measurements from the mooring LION located within the convection region. From 2009 to 2013, the mixed layer depth reaches the seabed, at a depth of 2330m, in February. Then, the violent vertical mixing of the whole water column lasts between 9 and 12 days setting up the characteristics of the newly formed deep water. Each deep convection winter formed a new warmer and saltier "vintage" of deep water. These sudden inputs of salt and heat in the deep ocean are responsible for trends in salinity (3.3 ± 0.2 × 10-3/yr) and potential temperature (3.2 ± 0.5 × 10-3 C/yr) observed from 2009 to 2013 for the 600-2300 m layer. For the first time, the overlapping of the three "phases" of deep convection can be observed, with secondary vertical mixing events (2-4 days) after the beginning of the restratification phase, and the restratification/spreading phase still active at the beginning of the following deep convection event.

Deepwater Horizon oil in Gulf of Mexico waters after 2 years: transformation into the dissolved organic matter pool.

PubMed

Bianchi, Thomas S; Osburn, Christopher; Shields, Michael R; Yvon-Lewis, Shari; Young, Jordan; Guo, Laodong; Zhou, Zhengzhen

2014-08-19

Recent work has shown the presence of anomalous dissolved organic matter (DOM), with high optical yields, in deep waters 15 months after the Deepwater Horizon (DWH) oil spill in the Gulf of Mexico (GOM). Here, we continue to use the fluorescence excitation-emission matrix (EEM) technique coupled with parallel factor analysis (PARAFAC) modeling, measurements of bulk organic carbon, dissolved inorganic carbon (DIC), oil indices, and other optical properties to examine the chemical evolution and transformation of oil components derived from the DWH in the water column of the GOM. Seawater samples were collected from the GOM during July 2012, 2 years after the oil spill. This study shows that, while dissolved organic carbon (DOC) values have decreased since just after the DWH spill, they remain higher at some stations than typical deep-water values for the GOM. Moreover, we continue to observe fluorescent DOM components in deep waters, similar to those of degraded oil observed in lab and field experiments, which suggest that oil-related fluorescence signatures, as part of the DOM pool, have persisted for 2 years in the deep waters. This supports the notion that some oil-derived chromophoric dissolved organic matter (CDOM) components could still be identified in deep waters after 2 years of degradation, which is further supported by the lower DIC and partial pressure of carbon dioxide (pCO2) associated with greater amounts of these oil-derived components in deep waters, assuming microbial activity on DOM in the current water masses is only the controlling factor of DIC and pCO2 concentrations.

Preconditioning and Formation Mechanisms of Maud Rise (Open Ocean) Polynyas in a High-Resolution CESM Simulation

NASA Astrophysics Data System (ADS)

Kurtakoti, P. K.; Veneziani, C.; Stoessel, A.; Weijer, W.

2016-12-01

Processes responsible for preconditioning and formation of Maud Rise Polynyas (MRP) were analyzed within the framework of a high-resolution fully coupled Community Earth System Model (CESM) simulation. Open Ocean Polynyas (OOPs) are large ice-free areas within the winter ice pack. These are regions of deep convection and strong atmosphere-ice-ocean interaction through which they play an important role in the formation of bottom waters. The data analyzed comes from a simulation conducted in a pre-industrial scenario as part of the Accelerated Climate Modeling for Energy (ACME) project. Within this simulation, persistent winter OOPs were simulated in the Weddell Sea (Weddell Sea Polynya) and over the Maud Rise seamount (Maud Rise Polynya). The sea ice concentration in the Weddell Sea shows that MRP acts as a precondition to Weddell Sea polynyas, which is consistent with mid 1970s observations of a westward expansion of MRP into the Weddell Sea. The OOPs in years 30-40 of the CESM simulation are largely over Maud Rise giving us an opportunity to investigate processes that trigger and maintain the OOP in winter over Maud Rise. The heat content of the Weddell Deep Water (WDW) is seen to be an important factor for MRPs, consistent with previous studies. The first MRP in the 30s coincides with the strongest negative wind stress curl over the Weddell Sea, which implies that this condition is a triggering mechanism for deep convection. The deep convective event associated with the OOP leads to a reduction of deep ocean heat reservoir up to 3000m depth. The simulation captures a westward flow of WDW impinging on Maud Rise seamount. Previous studies suggest Taylor column dynamics to be necessary for MRPs to emerge. We have explored how Taylor column dynamics could contribute to preconditioning and triggering deep open ocean convection over Maud Rise Seamount. We also investigate the importance of resolution of bottom topography for the formation of a strong enough Taylor column over Maud Rise to interact with the pycnocline to the point that an OOP develops.

Bubble Shuttle: A newly discovered transport mechanism, which transfers microorganisms from the sediment into the water column

NASA Astrophysics Data System (ADS)

Schmale, O.; Stolle, C.; Leifer, I.; Schneider von Deimling, J.; Kiesslich, K.; Krause, S.; Frahm, A.; Treude, T.

2013-12-01

The diversity and abundance of methanotrophic microorganisms is well studied in the aquatic environment, indicating their importance in biogeochemical cycling of methane in the sediment and the water column. However, whether methanotrophs are distinct populations in these habitats or are exchanged between benthic and pelagic environments, remains an open question. Therefore, field studies were conducted at the 'Rostocker Seep' site (Coal Oil Point seep area, California, USA) to test our hypothesis that methane-oxidizing microorganisms can be transported by gas bubbles from the sediment into the water column. The natural methane emanating location 'Rostocker Seep' showed a strong surface water oversaturation in methane with respect to the atmospheric equilibrium. Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (CARD-FISH) analyzes were performed to determine the abundance of aerobic and anaerobic methanotrophic microorganisms. Aerobic methane oxidizing bacteria were detected in the sediment and the water column, whereas anaerobic methanotrophs were detected exclusively in the sediment. The key device of the project was the newly developed "Bubble Catcher" used to collect naturally emanating gas bubbles at the sea floor together with particles attached to the bubble surface rim. Bubble Catcher experiments were carried out directly above a natural bubble release spot and on a reference site at which artificially released gas bubbles were caught, which had no contact with the sediment. CARD-FISH analyzes showed that aerobic methane oxidizing bacteria were transported by gas bubbles from the sediment into the water column. In contrast anaerobic methanotrophs were not detected in the bubble catcher. Further results indicate that this newly discovered Bubble Shuttle transport mechanism might influence the distribution pattern of methanotrophic microorganisms in the water column and even at the air-sea interface. Methane seep areas are often characterized by an elevated abundance of methane-oxidizing microorganisms, which consume a considerable amount of methane before it escapes into the atmosphere. Based on our study we hypothesize that the Bubble Shuttle transport mechanism contributes to this pelagic methane sink by a sediment-water column transfer of methane oxidizing microorganisms. Furthermore, this Bubble Shuttle may influence the methanotrophic community in the water column after massive short-term submarine inputs of methane (e.g. release of methane from bore holes). Especially in deep-sea regions, where the abundance of methane oxidizing microorganisms in the water column is low in general, Bubble Shuttle may inject a relevant amount of methane oxidizing microorganisms into the water column during massive inputs, supporting indirectly the turnover of this greenhouse active trace gas in the submarine environment.

Deep-convection events foster carbonate ion reduction in deep coral reefs

NASA Astrophysics Data System (ADS)

Perez, Fiz F.; Fontela, Marcos; Garcia-Ibañez, Maribel I.; Lherminier, Pascale; Zunino, Patricia; de la Paz, Mercedes; Padín, Xose A.; Alonso-Pérez, Fernando; Velo, Anton; Guallart, Elisa F.; Mercier, Herle

2017-04-01

Since millennial times, water mass circulation and deep-convection events have been transforming warm upper waters at high latitudes into cold and well-oxygenated deep waters. These processes have filled the deep North Atlantic Ocean with waters moderately saturated in calcium carbonate, thus promoting the growth of stony corals, which are hotspots of biodiversity. During the Anthropocene, the meridional circulation has been conveying cumulative amounts of more acidified waters with lower calcium carbonate saturation levels due to the incorporation of anthropogenic carbon dioxide, with very harsh conditions for deep cold-water corals projected by 2100. We evaluate the diminution of calcium carbonate saturation levels (aragonite form) due to the increase in anthropogenic carbon dioxide during the last two decades (2002-2016). We observe a strong decrease in the aragonite saturation levels concomitant with the reduction in the volume transport of aragonite-saturated waters. We estimate a 30-35% reduction in the transport of ion carbonate excess over the saturation levels with respect to the natural carbon cycle for the period 2002-2016. This reduction is associated with an increase in the downward transport of hydrogen ions. We also observe a heaving of the aragonite saturation horizons during the last 25 years, which is estimated at 6 m year-1 for the deep waters and 12-14 m year-1 for the intermediated waters. The harsh winters of 2015 and 2016 have fostered the fast addition of more acidified water into the lower layers of the North Atlantic through deep-convection events. In the future scenario of 2oC warming, the anthropogenic carbon dioxide in the water column would be double than today and the associated transport of hydrogen ions towards the bottom water would reduce the aragonite saturation levels to 60-80% with respect to preindustrial levels. This reduction in the aragonite saturation levels would suppose a strong diminution of the North Atlantic habitats where stony corals will be able to inhabit.

Importance of the Gulf of Aqaba for the formation of bottom water in the Red Sea

NASA Astrophysics Data System (ADS)

Plähn, Olaf; Baschek, Burkard; Badewien, Thomas H.; Walter, Maren; Rhein, Monika

2002-08-01

Conductivity-temperature-depth tracer and direct current measurements collected in the northern Red Sea in February and March 1999 are used to study the formation of deep and bottom water in that region. Historical data showed that open ocean convection in the Red Sea can contribute to the renewal of intermediate or deep water but cannot ventilate the bottom water. The observations in 1999 showed no evidence for open ocean convection in the Red Sea during the winter 1998/1999. The overflow water from the Gulf of Aqaba was found to be the densest water mass in the northern Red Sea. An anomaly of the chlorofluorocarbon component CFC-12 observed in the Gulf of Aqaba and at the bottom of the Red Sea suggests a strong contribution of this water mass to the renewal of bottom water in the Red Sea. The CFC data obtained during this cruise are the first available for this region. Because of the new signal, it is possible for the first time to subdivide the deep water column into deep and bottom water in the northern Red Sea. The available data set also shows that the outflow water from the Gulf of Suez is not dense enough to reach down to the bottom of the Red Sea but was found about 250 m above the bottom.

Determining Changes in Groundwater Quality during Managed Aquifer Recharge

NASA Astrophysics Data System (ADS)

Gambhir, T.; Houlihan, M.; Fakhreddine, S.; Dadakis, J.; Fendorf, S. E.

2016-12-01

Managed aquifer recharge (MAR) is becoming an increasingly prevalent technology for improving the sustainability of freshwater supply. However, recharge water can alter the geochemical conditions of the aquifer, mobilizing contaminants native to the aquifer sediments. Geochemical alterations on deep (>300 m) injection of highly treated recycled wastewater for MAR has received limited attention. We aim to determine how residual disinfectants used in water treatment processes, specifically the strong oxidants chloramine and hydrogen peroxide, affect metal mobilization within deep injection wells of the Orange County Water District. Furthermore, as the treated recharge water has very low ionic strength (44.6 mg L-1 total dissolved solids), we tested how differing concentrations of magnesium chloride and calcium chloride affected metal mobilization within deep aquifers. Continuous flow experiments were conducted on columns dry packed with sediments from a deep injection MAR site in Orange County, CA. The effluent was analyzed for shifts in water quality, including aqueous concentrations of arsenic, uranium, and chromium. Interaction between the sediment and oxic recharge solution causes naturally-occurring arsenopyrite to repartition onto iron oxides. The stability of arsenic on the newly precipitated iron oxides is dependent on pH changes during recharge.

Diversity-based acoustic communication with a glider in deep water.

PubMed

Song, H C; Howe, Bruce M; Brown, Michael G; Andrew, Rex K

2014-03-01

The primary use of underwater gliders is to collect oceanographic data within the water column and periodically relay the data at the surface via a satellite connection. In summer 2006, a Seaglider equipped with an acoustic recording system received transmissions from a broadband acoustic source centered at 75 Hz deployed on the bottom off Kauai, Hawaii, while moving away from the source at ranges up to ∼200 km in deep water and diving up to 1000-m depth. The transmitted signal was an m-sequence that can be treated as a binary-phase shift-keying communication signal. In this letter multiple receptions are exploited (i.e., diversity combining) to demonstrate the feasibility of using the glider as a mobile communication gateway.

4SM: A Novel Self-Calibrated Algebraic Ratio Method for Satellite-Derived Bathymetry and Water Column Correction

PubMed Central

Morel, Yann G.; Favoretto, Fabio

2017-01-01

All empirical water column correction methods have consistently been reported to require existing depth sounding data for the purpose of calibrating a simple depth retrieval model; they yield poor results over very bright or very dark bottoms. In contrast, we set out to (i) use only the relative radiance data in the image along with published data, and several new assumptions; (ii) in order to specify and operate the simplified radiative transfer equation (RTE); (iii) for the purpose of retrieving both the satellite derived bathymetry (SDB) and the water column corrected spectral reflectance over shallow seabeds. Sea truth regressions show that SDB depths retrieved by the method only need tide correction. Therefore it shall be demonstrated that, under such new assumptions, there is no need for (i) formal atmospheric correction; (ii) conversion of relative radiance into calibrated reflectance; or (iii) existing depth sounding data, to specify the simplified RTE and produce both SDB and spectral water column corrected radiance ready for bottom typing. Moreover, the use of the panchromatic band for that purpose is introduced. Altogether, we named this process the Self-Calibrated Supervised Spectral Shallow-sea Modeler (4SM). This approach requires a trained practitioner, though, to produce its results within hours of downloading the raw image. The ideal raw image should be a “near-nadir” view, exhibit homogeneous atmosphere and water column, include some coverage of optically deep waters and bare land, and lend itself to quality removal of haze, atmospheric adjacency effect, and sun/sky glint. PMID:28754028

4SM: A Novel Self-Calibrated Algebraic Ratio Method for Satellite-Derived Bathymetry and Water Column Correction.

PubMed

Morel, Yann G; Favoretto, Fabio

2017-07-21

All empirical water column correction methods have consistently been reported to require existing depth sounding data for the purpose of calibrating a simple depth retrieval model; they yield poor results over very bright or very dark bottoms. In contrast, we set out to (i) use only the relative radiance data in the image along with published data, and several new assumptions; (ii) in order to specify and operate the simplified radiative transfer equation (RTE); (iii) for the purpose of retrieving both the satellite derived bathymetry (SDB) and the water column corrected spectral reflectance over shallow seabeds. Sea truth regressions show that SDB depths retrieved by the method only need tide correction. Therefore it shall be demonstrated that, under such new assumptions, there is no need for (i) formal atmospheric correction; (ii) conversion of relative radiance into calibrated reflectance; or (iii) existing depth sounding data, to specify the simplified RTE and produce both SDB and spectral water column corrected radiance ready for bottom typing. Moreover, the use of the panchromatic band for that purpose is introduced. Altogether, we named this process the Self-Calibrated Supervised Spectral Shallow-sea Modeler (4SM). This approach requires a trained practitioner, though, to produce its results within hours of downloading the raw image. The ideal raw image should be a "near-nadir" view, exhibit homogeneous atmosphere and water column, include some coverage of optically deep waters and bare land, and lend itself to quality removal of haze, atmospheric adjacency effect, and sun/sky glint.

Biological and related chemical research concerning subseabed disposal of high level nuclear waste

NASA Astrophysics Data System (ADS)

Mullin, M. M.; Gomez, L. S.

1981-10-01

This report contains: recommendations (research on radionuclide movement processes, research on radionuclide transport processes, administration and policy); abstracts of plenary talks (Large-Scale Distributions of Deep-Sea Benthic Organisms, Transfer Processes Between Water Column and Benthos, Particle Reworking and Biogeochemistry of Sediments, and radioecological Aspects of Deep-Sea Waste Disposal of Radionuclides. Summaries of subgroup discussions (geochemistry and microbiology, benthic biology, pelagic biology, radioecology); and appendices (model of physical biological transfers, and participants and institutional affiliations) are also presented.

Copper-nickel-rich, amalgamated ferromanganese crust-nodule deposits from Shatsky Rise, NW Pacific

USGS Publications Warehouse

Hein, J.R.; Conrad, T.A.; Frank, M.; Christl, M.; Sager, W.W.

2012-01-01

A unique set of ferromanganese crusts and nodules collected from Shatsky Rise (SR), NW Pacific, were analyzed for mineralogical and chemical compositions, and dated using Be isotopes and cobalt chronometry. The composition of these midlatitude, deep-water deposits is markedly different from northwest-equatorial Pacific (PCZ) crusts, where most studies have been conducted. Crusts and nodules on SR formed in close proximity and some nodule deposits were cemented and overgrown by crusts, forming amalgamated deposits. The deep-water SR crusts are high in Cu, Li, and Th and low in Co, Te, and Tl concentrations compared to PCZ crusts. Thorium concentrations (ppm) are especially striking with a high of 152 (mean 56), compared to PCZ crusts (mean 11). The deep-water SR crusts show a diagenetic chemical signal, but not a diagenetic mineralogy, which together constrain the redox conditions to early oxic diagenesis. Diagenetic input to crusts is rare, but unequivocal in these deep-water crusts. Copper, Ni, and Li are strongly enriched in SR deep-water deposits, but only in layers older than about 3.4 Ma. Diagenetic reactions in the sediment and dissolution of biogenic calcite in the water column are the likely sources of these metals. The highest concentrations of Li are in crust layers that formed near the calcite compensation depth. The onset of Ni, Cu, and Li enrichment in the middle Miocene and cessation at about 3.4 Ma were accompanied by changes in the deep-water environment, especially composition and flow rates of water masses, and location of the carbonate compensation depth.

Lytic viral infection of bacterioplankton in deep waters of the western Pacific Ocean

NASA Astrophysics Data System (ADS)

Li, Y.; Luo, T.; Sun, J.; Cai, L.; Liang, Y.; Jiao, N.; Zhang, R.

2014-05-01

As the most abundant biological entities in the ocean, viruses influence host mortality and nutrient recycling mainly through lytic infection. Yet, the ecological characteristics of virioplankton and viral impacts on host mortality and biogeochemical cycling in the deep sea are largely unknown. In the present study, viral abundance and lytic infection were investigated throughout the water column in the western Pacific Ocean. Both the prokaryotic and viral abundance and production showed a significantly decreasing trend from epipelagic to meso- and bathypelagic waters. Viral abundance decreased from 0.36-1.05 × 1010 particles L-1 to 0.43-0.80 × 109 particles L-1, while the virus : prokaryote ratio varied from 7.21 to 16.23 to 2.45-23.40, at the surface and 2000 m, respectively. Lytic viral production rates in surface and 2000 m waters were, on average, 1.03 × 1010 L-1 day-1 and 5.74 × 108 L-1 day-1. Relatively high percentages of prokaryotic cells lysed by viruses at 1000 and 2000 m were observed, suggesting a significant contribution of viruses to prokaryotic mortality in the deep ocean. The carbon released by viral lysis in deep western Pacific Ocean waters was from 0.03 to 2.32 μg C L-1 day-1. Our findings demonstrated a highly dynamic and active viral population in these deep waters and suggested that virioplankton play an important role in the microbial loop and subsequently biogeochemical cycling in deep oceans.

Determination of mass accumulation rates and sediment radionuclide inventories in the deep Black Sea

NASA Astrophysics Data System (ADS)

Buesseler, Ken O.; Benitez, Claudia R.

1994-11-01

Accumulation rates were determined from a detailed profile of 210Pb excess in the top 3 cm of a box core from the deep waters of the western Black Sea. The data suggest a mass accumulation rate (MAR) of 69 ± 3g m -2y -1, less than half the MAR determined by varve counting. It is concluded that recognizable laminae couplets are not formed annually in these sediments. Further support for this conclusion is provided by the well documented fallout peaks of 239,240Pu and 137Cs from atmospheric nuclear weapons testing in the 1960s and the 1986 Chernobyl reactor accident. The 210Pb derived MAR from the top 3 cm is significantly higher than the long-term MAR determined from 14C data, suggesting an increase in accumulation rates within the past 1000-2000 years. The sedimen inventories of 210Pb excess and 239,240Pu match their expected supply, whereas most of the fallout 137Cs remains in the water column. The measured increase in 226Ra inventory in the top cm of this core matches the previously observed decrease in water column 226Ra during the past 30 years.

Mapping of sound scattering objects in the northern part of the Barents Sea and their geological interpretation

NASA Astrophysics Data System (ADS)

Sokolov, S. Yu.; Moroz, E. A.; Abramova, A. S.; Zarayskaya, Yu. A.; Dobrolubova, K. O.

2017-07-01

On cruises 25 (2007) and 28 (2011) of the R/V Akademik Nikolai Strakhov in the northern part of the Barents Sea, the Geological Institute, Russian Academy of Sciences, conducted comprehensive research on the bottom relief and upper part of the sedimentary cover profile under the auspices of the International Polar Year program. One of the instrument components was the SeaBat 8111 shallow-water multibeam echo sounder, which can map the acoustic field similarly to a side scan sonar, which records the response both from the bottom and from the water column. In the operations area, intense sound scattering objects produced by the discharge of deep fluid flows are detected in the water column. The sound scattering objects and pockmarks in the bottom relief are related to anomalies in hydrocarbon gas concentrations in bottom sediments. The sound scattering objects are localized over Triassic sequences outcropping from the bottom. The most intense degassing processes manifest themselves near the contact of the Triassic sequences and Jurassic clay deposits, as well as over deep depressions in a field of Bouguer anomalies related to the basement of the Jurassic-Cretaceous rift system

Chloroflexi CL500-11 Populations That Predominate Deep-Lake Hypolimnion Bacterioplankton Rely on Nitrogen-Rich Dissolved Organic Matter Metabolism and C1 Compound Oxidation.

PubMed

Denef, Vincent J; Mueller, Ryan S; Chiang, Edna; Liebig, James R; Vanderploeg, Henry A

2015-12-18

The Chloroflexi CL500-11 clade contributes a large proportion of the bacterial biomass in the oxygenated hypolimnia of deep lakes worldwide, including the world's largest freshwater system, the Laurentian Great Lakes. Traits that allow CL500-11 to thrive and its biogeochemical role in these environments are currently unknown. Here, we found that a CL500-11 population was present mostly in offshore waters along a transect in ultraoligotrophic Lake Michigan (a Laurentian Great Lake). It occurred throughout the water column in spring and only in the hypolimnion during summer stratification, contributing up to 18.1% of all cells. Genome reconstruction from metagenomic data suggested an aerobic, motile, heterotrophic lifestyle, with additional energy being gained through carboxidovory and methylovory. Comparisons to other available streamlined freshwater genomes revealed that the CL500-11 genome contained a disproportionate number of cell wall/capsule biosynthesis genes and the most diverse spectrum of genes involved in the uptake of dissolved organic matter (DOM) substrates, particularly peptides. In situ expression patterns indicated the importance of DOM uptake and protein/peptide turnover, as well as type I and type II carbon monoxide dehydrogenase and flagellar motility. Its location in the water column influenced its gene expression patterns the most. We observed increased bacteriorhodopsin gene expression and a response to oxidative stress in surface waters compared to its response in deep waters. While CL500-11 carries multiple adaptations to an oligotrophic lifestyle, its investment in motility, its large cell size, and its distribution in both oligotrophic and mesotrophic lakes indicate its ability to thrive under conditions where resources are more plentiful. Our data indicate that CL500-11 plays an important role in nitrogen-rich DOM mineralization in the extensive deep-lake hypolimnion habitat. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Bacterial diversity and community composition from seasurface to subseafloor.

PubMed

Walsh, Emily A; Kirkpatrick, John B; Rutherford, Scott D; Smith, David C; Sogin, Mitchell; D'Hondt, Steven

2016-04-01

We investigated compositional relationships between bacterial communities in the water column and those in deep-sea sediment at three environmentally distinct Pacific sites (two in the Equatorial Pacific and one in the North Pacific Gyre). Through pyrosequencing of the v4-v6 hypervariable regions of the 16S ribosomal RNA gene, we characterized 450,104 pyrotags representing 29,814 operational taxonomic units (OTUs, 97% similarity). Hierarchical clustering and non-metric multidimensional scaling partition the samples into four broad groups, regardless of geographic location: a photic-zone community, a subphotic community, a shallow sedimentary community and a subseafloor sedimentary community (⩾1.5 meters below seafloor). Abundance-weighted community compositions of water-column samples exhibit a similar trend with depth at all sites, with successive epipelagic, mesopelagic, bathypelagic and abyssopelagic communities. Taxonomic richness is generally highest in the water-column O2 minimum zone and lowest in the subseafloor sediment. OTUs represented by abundant tags in the subseafloor sediment are often present but represented by few tags in the water column, and represented by moderately abundant tags in the shallow sediment. In contrast, OTUs represented by abundant tags in the water are generally absent from the subseafloor sediment. These results are consistent with (i) dispersal of marine sedimentary bacteria via the ocean, and (ii) selection of the subseafloor sedimentary community from within the community present in shallow sediment.

Authigenic carbonate precipitation at the end-Guadalupian (Middle Permian) in China: Implications for the carbon cycle in ancient anoxic oceans

NASA Astrophysics Data System (ADS)

Saitoh, Masafumi; Ueno, Yuichiro; Isozaki, Yukio; Shibuya, Takazo; Yao, Jianxin; Ji, Zhansheng; Shozugawa, Katsumi; Matsuo, Motoyuki; Yoshida, Naohiro

2015-12-01

Carbonate precipitation is a major process in the global carbon cycle. It was recently proposed that authigenic carbonate (carbonate precipitated in situ at the sediment-water interface and/or within the sediment) played a major role in the carbon cycle throughout Earth's history. The carbon isotopic composition of authigenic carbonates in ancient oceans have been assumed to be significantly lower than that of dissolved inorganic carbon (DIC) in seawater, as is observed in the modern oceans. However, the δ13Ccarb values of authigenic carbonates in the past has not been analyzed in detail. Here, we report authigenic carbonates in the uppermost Guadalupian (Middle Permian) rocks at Chaotian, Sichuan, South China. Monocrystalline calcite crystals <20 mm long are common in the black mudstone/chert sequence that was deposited on a relatively deep anoxic slope/basin along the continental margin. Textures of the crystals indicate in situ precipitation on the seafloor and/or within the sediments. The calcite precipitation corresponds stratigraphically with denitrification and sulfate reduction in the anoxic deep-water mass, as indicated by previously reported nitrogen and sulfur isotope records, respectively. Relatively high δ13Ccarb values of the authigenic carbonates (largely -1 ‰) compared with those of organic matter in the rocks (ca. -26 ‰) suggest that the main carbon source of the carbonates was DIC in the water column. The calcite crystals precipitated in an open system with respect to carbonate, possibly near the sediment-water interface rather than deep within the sediments. The δ13Ccarb values of the carbonates were close to the δ13CDIC value of seawater due to mixing of 13C-depleted remineralized organic carbon (that was released into the water column by the water-mass anaerobic respiration) with the large DIC pool in the oceans. Our results imply that δ13Ccarb values of authigenic carbonates in the anoxic oceans might have been systematically different from the values in the oxic oceans in Earth's history, controlled by the depth of the redoxcline in the water column and sediments. If our model is correct, authigenic carbonates with relatively high δ13Ccarb values in the ancient anoxic oceans may have had a less substantial influence on the bulk δ13Ccarb values in geologic records than has been previously suggested.

Dining in the Deep: The Feeding Ecology of Deep-Sea Fishes

NASA Astrophysics Data System (ADS)

Drazen, Jeffrey C.; Sutton, Tracey T.

2017-01-01

Deep-sea fishes inhabit ˜75% of the biosphere and are a critical part of deep-sea food webs. Diet analysis and more recent trophic biomarker approaches, such as stable isotopes and fatty-acid profiles, have enabled the description of feeding guilds and an increased recognition of the vertical connectivity in food webs in a whole-water-column sense, including benthic-pelagic coupling. Ecosystem modeling requires data on feeding rates; the available estimates indicate that deep-sea fishes have lower per-individual feeding rates than coastal and epipelagic fishes, but the overall predation impact may be high. A limited number of studies have measured the vertical flux of carbon by mesopelagic fishes, which appears to be substantial. Anthropogenic activities are altering deep-sea ecosystems and their services, which are mediated by trophic interactions. We also summarize outstanding data gaps.

77 FR 50038 - National Oil and Hazardous Substances Pollution Contingency Plan; National Priorities List...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-20

... picograms/liter (water column dissolved concentration). The TCDD Study, together with the model, indicated... 1983 (48 FR 40658). Remedial Investigation and Feasibility Study (RI/FS) EPA filed a lawsuit in 1979 in... (monitoring wells for early detection of Site chemicals); Intermediate and Deep Formations Study (monitoring...

Technical Note: Detection of gas bubble leakage via correlation of water column multibeam images

NASA Astrophysics Data System (ADS)

Schneider von Deimling, J.; Papenberg, C.

2011-07-01

Hydroacoustic detection of natural gas release from the seafloor has been conducted in the past by using singlebeam echosounders. In contrast modern multibeam swath mapping systems allow much wider coverage, higher resolution, and offer 3-D spatial correlation. However, up to the present, the extremely high data rate hampers water column backscatter investigations. More sophisticated visualization and processing techniques for water column backscatter analysis are still under development. We here present such water column backscattering data gathered with a 50 kHz prototype multibeam system. Water column backscattering data is presented in videoframes grabbed over 75 s and a "re-sorted" singlebeam presentation. Thus individual gas bubbles rising from the 24 m deep seafloor clearly emerge in the acoustic images and rise velocities can be determined. A sophisticated processing scheme is introduced to identify those rising gas bubbles in the hydroacoustic data. It applies a cross-correlation technique similar to that used in Particle Imaging Velocimetry (PIV) to the acoustic backscatter images. Tempo-spatial drift patterns of the bubbles are assessed and match very well measured and theoretical rise patterns. The application of this processing scheme to our field data gives impressive results with respect to unambiguous bubble detection and remote bubble rise velocimetry. The method can identify and exclude the main driver for misinterpretations, i.e. fish-mediated echoes. Even though image-based cross-correlation techniques are well known in the field of fluid mechanics for high resolution and non-inversive current flow field analysis, this technique was never applied in the proposed sense for an acoustic bubble detector.

Beyond the vent: New perspectives on hydrothermal plumes and pelagic biology

NASA Astrophysics Data System (ADS)

Phillips, Brennan T.

2017-03-01

Submarine hydrothermal vent fields introduce buoyant plumes of chemically altered seawater to the deep-sea water column. Chemoautotrophic microbes exploit this energy source, facilitating seafloor-based primary production that evidence suggests may transfer to pelagic consumers. While most hydrothermal plumes have relatively small volumes, there are recent examples of large-scale plume events associated with periods of eruptive activity, which have had a pronounced effect on water-column biology. This correlation suggests that hydrothermal plumes may have influenced basin-scale ocean chemistry during periods of increased submarine volcanism during the Phanerozoic eon. This paper synthesizes a growing body of scientific evidence supporting the hypothesis that hydrothermal plumes are the energetic basis of unique deep-sea pelagic food webs. While many important questions remain concerning the biology of hydrothermal plumes, this discussion is not present in ongoing management efforts related to seafloor massive sulfide (SMS) mining. Increased research efforts, focused on high-resolution surveys of midwater biology relative to plume structures, are recommended to establish baseline conditions and monitor the impact of future mining-based disturbances to the pelagic biosphere.

Lateral-delivered organic matter boosts hadal bacterial abundance in the Mariana Trench: A hypothesis

NASA Astrophysics Data System (ADS)

Zhang, C.; Liu, H.; Lu, F.; Zou, L.; Tian, J.

2017-12-01

Hadal trenches are part of the least investigated biosphere on Earth due to the great challenge of sampling. Limited studies on microbiology by far have suggested that the hadalsphere hosts a heterotrophic microbial community that is likely fed by organic matter from surface-sinking biomass or re-suspended and laterally transported sediments. The uniqueness of trench environment and its potential role in global carbon sequestration entitle a detailed study on microbial-driven carbon cycle of the trench system. In this study, we conducted a vertical sampling of the microbial community and measured the environmental factors from the epipelagic zone down to the hadal zone at the Mariana Trench. 16S rRNA gene composition showed high stratification at the first 1000 meters below surface (mbs) but a nearly uniformed microbial community composition was observed at the abyssopelagic and the hadalpelagic water columns. The deep-sea bacteria were generally chemoheterotrophs and the majority of them were similar to those present at the ocean surface, suggesting influence of epipelagic primary production on deep sea bacterial communication at the trench location. Several deep-sea-enriched but surface-depleted bacteria could be characterized by potential degraders of polysaccharides and n-alkanes. Therefore, recalcitrant hydrocarbons or carbohydrates are likely important carbon sources supporting the deep-sea biosphere. In spite of consistent community composition, a remarkable increase in biomass of small-sized microbial aggregates was detected at 8727 mbs. Enhanced CDOM proportions in the trench imply intensified microbial activity in hadal water compared to the above water column, which agree with the notion of possible extra carbon input from lateral transportation of slope material. These observations extend our understanding in carbon cycle driven by metabolically diverse microorganisms at the trench and may shed light on the complexity of hadal biogeochemistry.

A redox-stratified ocean 3.2 billion years ago

NASA Astrophysics Data System (ADS)

Satkoski, Aaron M.; Beukes, Nicolas J.; Li, Weiqiang; Beard, Brian L.; Johnson, Clark M.

2015-11-01

Before the Great Oxidation Event (GOE) 2.4-2.2 billion years ago it has been traditionally thought that oceanic water columns were uniformly anoxic due to a lack of oxygen-producing microorganisms. Recently, however, it has been proposed that transient oxygenation of shallow seawater occurred between 2.8 and 3.0 billion years ago. Here, we present a novel combination of stable Fe and radiogenic U-Th-Pb isotope data that demonstrate significant oxygen contents in the shallow oceans at 3.2 Ga, based on analysis of the Manzimnyama Banded Iron Formation (BIF), Fig Tree Group, South Africa. This unit is exceptional in that proximal, shallow-water and distal, deep-water facies are preserved. When compared to the distal, deep-water facies, the proximal samples show elevated U concentrations and moderately positive δ56Fe values, indicating vertical stratification in dissolved oxygen contents. Confirmation of oxidizing conditions using U abundances is robustly constrained using samples that have been closed to U and Pb mobility using U-Th-Pb geochronology. Although redox-sensitive elements have been commonly used in ancient rocks to infer redox conditions, post-depositional element mobility has been rarely tested, and U-Th-Pb geochronology can constrain open- or closed-system behavior. The U abundances and δ56Fe values of the Manzimnyama BIF suggest the proximal, shallow-water samples record precipitation under stronger oxidizing conditions compared to the distal deeper-water facies, which in turn indicates the existence of a discrete redox boundary between deep and shallow ocean waters at this time; this work, therefore, documents the oldest known preserved marine redox gradient in the rock record. The relative enrichment of O2 in the upper water column is likely due to the existence of oxygen-producing microorganisms such as cyanobacteria. These results provide a new approach for identifying free oxygen in Earth's ancient oceans, including confirming the age of redox proxies, and indicate that cyanobacteria evolved prior to 3.2 Ga.

Lytic viral infection of bacterioplankton in deep waters of the western Pacific Ocean

NASA Astrophysics Data System (ADS)

Li, Y.; Luo, T.; Sun, J.; Cai, L.; Jiao, N.; Zhang, R.

2013-12-01

As the most abundant biological entities in the ocean, viruses can influence host mortality and nutrients recycling mainly through lytic infection. Yet ecological characteristics of virioplankton and viral impacts on host mortality and biogeochemical cycling in the deep sea are largely unknown. In present study, viral abundance and lytic infection was investigated throughout the water column in the western Pacific Ocean. Both the prokaryotic and viral abundance and production showed a significantly decreasing trend from epipelagic to meso- and bathypelagic waters. Viral abundance decreased from 0.36-1.05 × 1010 particles L-1 to 0.43-0.80 × 109 particles L-1, while the virus : prokaryote ratio varied from 7.21-16.23 to 2.45-23.40, at surface and 2000 m depth, respectively. The lytic viral production rates in surface and 2000 m waters were, averagely, 1.03 × 1010 L-1 day-1 and 5.74 × 108 L-1 day-1, respectively. Relatively high percentages of prokaryotic cells lysed by virus in 1000 m and 2000 m were observed, suggesting a significant contribution of viruses to prokaryotic mortality in deep ocean. The carbon released by viral lysis in deep western Pacific Ocean waters was from 0.03 to 2.32 μg C L-1 day-1. Our findings demonstrated a highly dynamic and active viral population in the deep western Pacific Ocean and suggested that virioplankton play an important role in the microbial loop and subsequently biogeochemical cycling in deep oceans.

Eastern Ionian Sea paleoceanographic conditions during the Plio - Pleistocene as revealed through the study of fish otoliths

NASA Astrophysics Data System (ADS)

Agiadi, K.; Triantaphyllou, M. V.; Girone, A.; Karakitsios, V.; Dermitzakis, M. D.

2009-04-01

Fish otoliths from the SE Zakynthos and SW Kephallonia islands (Eastern Ionian Sea) provide new evidence for the reconstruction of the paleoceanographic conditions during the Late Pliocene - Early Pleistocene interval. The forty - six fish taxa identified in the sediments of the study areas are separated in tropical, subtropical, temperate and subpolar ecological groups occupying surface, intermediate and deep water layers, based on their modern geographic and bathymetric distributions. During the Late Pliocene, the presence of Chlorophthalmus agassizi in the Eastern Ionian Sea probably denotes temperate oligotrophic conditions. At about 1.96 Ma B.P the high contribution of the bathypelagic Electrona risso, whose modern contribution is limited by the 10-15° C isotherms and productivity greater than 50gC/m2y (Whitehead et al., 1984), is combined with the increased presence of the deeper water species Maurolicus muelleri and Benthosema glaciale, which are mostly known from the high temperate - subpolar zones of today's oceans (Whitehead et al., 1984; Mytilineou et al., 2005). The nutrient-rich intermediate water layers at this time thus overlie colder deep waters, much like today (Malanotte-Rizzoli et al., 1997). In addition, the high abundance of representatives of the genus Diaphus could imply warmer surface conditions (Whitehead et al., 1984). The situation around 1.93 Ma, throughout the water column, is much more homogenous, signified by the introduction of Hygophum hygomii in the deeper water layers, as well as the decrease in relative abundance of Benthosema glaciale, perhaps due to a certain increase in deep water temperate. However, the most dominant species by far in the assemblage remains Ceratoscopelus maderensis, a purely temperate meso-bahtypelagic species (D'Onghia et al., 2004). At around 1.9Ma, there is a marked increase in the relative abundance of tropical taxa, namely Diaphus taaningi and Bregmaceros sp., which occupy the upper 500 meters of the water column. This increase in the tropical group of surface and intermediate waters, along with a decrease accordingly of both subtropical and temperate taxa, can be attributed to a climatic optimum at this time. However notable is the strong presence also of cold species Nansenia groenlandica and Benthosema glaciale in deeper water layers (mostly below 500 meters). Considering this event, it seems that warmer Atlantic water inflow in the Mediterranean, as a result of higher mean temperatures at this time, could be responsible for the upper part of the water column temperature increase. In addition, the formation of deeper water with lower temperatures than before could be attributed to increased river run off in the Adriatic Sea, which then inflows to the study areas. The paleoceanographic conditions appear generally stable until the uppermost part of the Pliocene, with colder temperatures prevailing gradually with an increase in relative abundance of Maurolicus muelleri combined with a decrease of Electrona risso. In the uppermost Pliocene and lowermost Pleistocene (around 1.73 Ma) the relative abundance of Electrona risso increases again in both study areas. Finally, the conditions in the upper part of the stratigraphic sequences return to temperate, with notable the presence of Myctophum punctatum, typically associated with upwelling conditions (Whitehead et al., 1984). Fish otoliths, as indicators of the paleoceanographic conditions throughout the water column, play a most significant role in the reconstruction of the deep - sea conditions. The presented palaeoecologic analysis of the Teleost fauna reveals distinct phases in the evolution of climate and oceanography during the Late Pliocene - Early Pleistocene interval. Notwithstanding the general deterioration of climate progressing into the Pleistocene era, it appears that the Mediterranean paleocirculation in conjunction with regional topography were modulated by the constantly changing global climatic conditions, to produce a rather compex palaeoceanographic setting in the central part of the basin. In this respect, fish otoliths offer a unique opportunity to reconstruct the palaeoenvironmental conditions in the entire water column and through time. D'Onghia, G., Lloris, D., Politou, C.-Y., Sion, L., Dokos, L. (2004) New records of deep-water teleost fishes in the Balearic Sea and Ionian Sea (Mediterranean Sea). Scientia Marina, 68(3): 171-183. Malanotte - Rizzoli, P., Manca, B.B., d'Alcala, M.R., Theocharis, A., Bergamasco, A., Bregant, D., Budillon, G., Civitarese, G., Georgopoulos, D., Michelato, A., Snsone, E., Scarazzato, P., Souvermezoglou, E. (1997). A synthesis of the Ionian Sea hydrography, circulation and water mass pathways during POEM-Phase I, Progress in Oceanography, 39: 153-204. Mytilineou, C., Politou, C.-Y., Papaconstantinou, C., Kavadas, S., D'Onghia, G., Sion, L. (2005) Deep-water fish fauna in the Eastern Ionian Sea. Belgian Journal of Zoology, 135 (2): 229-233. Whitehead, P.J.P., Bauchot, M.L., Hureau, J.C., Nielsen, J., Tortonese, E. (1984) Fishes of the North-Eastern Atlantic and the Mediterranean, Unesco, I: 510pp.

The Morphometry of Lake Palmas, a Deep Natural Lake in Brazil

PubMed Central

Barroso, Gilberto F.; Gonçalves, Monica A.; Garcia, Fábio da C.

2014-01-01

Lake Palmas (A = 10.3km2) is located in the Lower Doce River Valley (LDRV), on the southeastern coast of Brazil. The Lake District of the LDRV includes 90 lakes, whose basic geomorphology is associated with the alluvial valleys of the Barreiras Formation (Cenozoic, Neogene) and with the Holocene coastal plain. This study aimed to investigate the relationship of morphometry and thermal pattern of a LDRV deep lake, Lake Palmas. A bathymetric survey carried out in 2011 and the analysis of hydrographic and wind data with a geographic information system allowed the calculation of several metrics of lake morphometry. The vertical profiling of physical and chemical variables in the water column during the wet/warm and dry/mild cold seasons of 2011 to 2013 has furnished a better understanding of the influence of the lake morphometry on its structure and function. The overdeepened basin has a subrectangular elongated shape and is aligned in a NW-SE direction in an alluvial valley with a maximum depth (Zmax) of 50.7m, a volume of 2.2×108 m3 (0.22km3) and a mean depth (Zmv) of 21.4m. These metrics suggest Lake Palmas as the deepest natural lake in Brazil. Water column profiling has indicated strong physical and chemical stratification during the wet/warm season, with a hypoxic/anoxic layer occupying one-half of the lake volume. The warm monomictic pattern of Lake Palmas, which is in an accordance to deep tropical lakes, is determined by water column mixing during the dry and mild cold season, especially under the influence of a high effective fetch associated with the incidence of cold fronts. Lake Palmas has a very long theoretical retention time, with a mean of 19.4 years. The changes observed in the hydrological flows of the tributary rivers may disturb the ecological resilience of Lake Palmas. PMID:25406062

Analysis and seismic tests of composite shear walls with CFST columns and steel plate deep beams

NASA Astrophysics Data System (ADS)

Dong, Hongying; Cao, Wanlin; Wu, Haipeng; Zhang, Jianwei; Xu, Fangfang

2013-12-01

A composite shear wall concept based on concrete filled steel tube (CFST) columns and steel plate (SP) deep beams is proposed and examined in this study. The new wall is composed of three different energy dissipation elements: CFST columns; SP deep beams; and reinforced concrete (RC) strips. The RC strips are intended to allow the core structural elements — the CFST columns and SP deep beams — to work as a single structure to consume energy. Six specimens of different configurations were tested under cyclic loading. The resulting data are analyzed herein. In addition, numerical simulations of the stress and damage processes for each specimen were carried out, and simulations were completed for a range of location and span-height ratio variations for the SP beams. The simulations show good agreement with the test results. The core structure exhibits a ductile yielding mechanism characteristic of strong column-weak beam structures, hysteretic curves are plump and the composite shear wall exhibits several seismic defense lines. The deformation of the shear wall specimens with encased CFST column and SP deep beam design appears to be closer to that of entire shear walls. Establishing optimal design parameters for the configuration of SP deep beams is pivotal to the best seismic behavior of the wall. The new composite shear wall is therefore suitable for use in the seismic design of building structures.

Total Mercury and Methylmercury Response in Water, Sediment, and Biota to Destratification of the Great Salt Lake, Utah, United States.

PubMed

Valdes, Carla; Black, Frank J; Stringham, Blair; Collins, Jeffrey N; Goodman, James R; Saxton, Heidi J; Mansfield, Christopher R; Schmidt, Joshua N; Yang, Shu; Johnson, William P

2017-05-02

Measurements of chemical and physical parameters made before and after sealing of culverts in the railroad causeway spanning the Great Salt Lake in late 2013 documented dramatic alterations in the system in response to the elimination of flow between the Great Salt Lake's north and south arms. The flow of denser, more-saline water through the culverts from the north arm (Gunnison Bay) to the south arm (Gilbert Bay) previously drove the perennial stratification of the south arm and the existence of oxic shallow brine and anoxic deep brine layers. Closure of the causeway culverts occurred concurrently with a multiyear drought that resulted in a decrease in the lake elevation and a concomitant increase in top-down erosion of the upper surface of the deep brine layer by wind-forced mixing. The combination of these events resulted in the replacement of the formerly stratified water column in the south arm with one that was vertically homogeneous and oxic. Total mercury concentrations in the deep waters of the south arm decreased by approximately 81% and methylmercury concentrations in deep waters decreased by roughly 86% due to destratification. Methylmercury concentrations decreased by 77% in underlying surficial sediment, whereas there was no change observed in total mercury. The dramatic mercury loss from deep waters and methylmercury loss from underlying sediment in response to causeway sealing provides new understanding of the potential role of the deep brine layer in the accumulation and persistence of methylmercury in the Great Salt Lake. Additional mercury measurements in biota appear to contradict the previously implied connection between elevated methylmercury concentrations in the deep brine layer and elevated mercury in avian species reported prior to causeway sealing.

Assessment of Southern Ocean water mass circulation and characteristics in CMIP5 models: Historical bias and forcing response

NASA Astrophysics Data System (ADS)

Sallée, J.-B.; Shuckburgh, E.; Bruneau, N.; Meijers, A. J. S.; Bracegirdle, T. J.; Wang, Z.; Roy, T.

2013-04-01

The ability of the models contributing to the fifth Coupled Models Intercomparison Project (CMIP5) to represent the Southern Ocean hydrological properties and its overturning is investigated in a water mass framework. Models have a consistent warm and light bias spread over the entire water column. The greatest bias occurs in the ventilated layers, which are volumetrically dominated by mode and intermediate layers. The ventilated layers have been observed to have a strong fingerprint of climate change and to impact climate by sequestrating a significant amount of heat and carbon dioxide. The mode water layer is poorly represented in the models and both mode and intermediate water have a significant fresh bias. Under increased radiative forcing, models simulate a warming and lightening of the entire water column, which is again greatest in the ventilated layers, highlighting the importance of these layers for propagating the climate signal into the deep ocean. While the intensity of the water mass overturning is relatively consistent between models, when compared to observation-based reconstructions, they exhibit a slightly larger rate of overturning at shallow to intermediate depths, and a slower rate of overturning deeper in the water column. Under increased radiative forcing, atmospheric fluxes increase the rate of simulated upper cell overturning, but this increase is counterbalanced by diapycnal fluxes, including mixed-layer horizontal mixing, and mostly vanishes.

Disentangling the record of diagenesis, local redox conditions, and global seawater chemistry during the latest Ordovician glaciation

NASA Astrophysics Data System (ADS)

Ahm, Anne-Sofie C.; Bjerrum, Christian J.; Hammarlund, Emma U.

2017-02-01

The Late Ordovician stratigraphic record integrates glacio-eustatic processes, water-column redox conditions and carbon cycle dynamics. This complex stratigraphic record, however, is dominated by deposits from epeiric seas that are susceptible to local physical and chemical processes decoupled from the open ocean. This study contributes a unique deep water basinal perspective to the Late Ordovician (Hirnantian) glacial record and the perturbations in seawater chemistry that may have contributed to the Hirnantian mass extinction event. We analyze recently drilled cores and outcrop samples from the upper Vinini Formation in central Nevada and report combined trace- and major element geochemistry, Fe speciation (FePy /FeHR and FeHR /FeT), and stable isotope chemostratigraphy (δ13COrg and δ34SPy). Measurements of paired samples from outcrop and core reveal that reactive Fe is preserved mainly as pyrite in core samples, while outcrop samples have been significantly altered as pyrite has been oxidized and remobilized by modern weathering processes. Fe speciation in the more pristine core samples indicates persistent deep water anoxia, at least locally through the Late Ordovician, in contrast to the prevailing interpretation of increased Hirnantian water column oxygenation in shallower environments. Deep water redox conditions were likely decoupled from shallower environments by a basinal shift in organic matter export driven by decreasing rates of organic matter degradation and decreasing shelf areas. The variable magnitude in the record of the Hirnantian carbon isotope excursion may be explained by this increased storage of isotopically light carbon in the deep ocean which, in combination with increased glacio-eustatic restriction, would strengthen lateral- and vertical gradients in seawater chemistry. We adopt multivariate statistical methods to deconstruct the spatial and temporal re-organization of seawater chemistry during the Hirnantian glaciation and attempt to isolate the latent magnitude and global perturbation in the carbon cycle. We speculate, using a two component mixing model and residual estimates from principal component analysis, that the secular open ocean Hirnantian C isotope excursion possibly amounts to only ∼ +1.5‰. Such an increase could be mechanistically driven by the combination of sea-level fall, persistent deep water anoxia, and cooler glacial temperatures that increased the organic carbon burial efficiency in the deeper basins.

Temperature Dynamics in Very Shallow Water Bodies: the Role of Heat Fluxes at the Soil-Water Interface

NASA Astrophysics Data System (ADS)

Pivato, M.; Carniello, L.; Silvestri, S.; Marani, M.; Gardner, J.

2016-12-01

Water temperature represents one of the crucial factors driving the ecological processes in water bodies. Many contributions are available in the literature that describe temperature dynamics in deep basins as lakes or seas. Those basins are typically stratified which makes important to represent the vertical profile of the water temperature. Dealing with shallow water bodies, such as rivers, shallow lakes and lagoons, simplifies the problem because the water temperature can be assumed uniform in the water column. Conversely, the heat exchange at the soil-water interface assumes an important role in the water temperature dynamics. Notwithstanding, very few studies and data about this process are available in the literature. In order to provide more insight on the soil contribution to water temperature dynamics, we performed ad hoc field measurements in the Venice lagoon,. We selected a location on a tidal flat in the northern part of the lagoon, close to the Sant'Erasmo Island, where we measured the temperature within the water column and the first 1.5 m of the soil. Data collection started in July 2015 and is still ongoing. We used the data to characterize the heat flux at the water-soil interface in different periods of the year and to develop a "point" model for describing the evolution of the temperature in the water column. The insight on the process provided by the data and by the point model: i) enabled us to determine the soil thermal properties (diffusivity and heat capacity); ii) confirms the uniform profile of the water temperature in the water column; iii) demonstrates that the heat flux at the soil-water interface is comparable with other fluxes at the air-water interface and iv) highlights the important role exerted by advective water fluxes. The latter will be accounted for developing a module for describing the dynamic of the temperature to be coupled with an already existing 2D hydrodynamic model of the Venice lagoon.

Life Under the Ice: Spatial and Temporal Patterns in Rates of Water Column and Sediment Respiration in 5 Alaskan Arctic Lakes

NASA Astrophysics Data System (ADS)

Sadro, S.; MacIntyre, S.

2014-12-01

Alaskan arctic lakes lay covered by up to three meters of ice and snow for approximately two-thirds of the year, yet comparatively little is known about their ecosystem metabolism during this period. We combined the use of free-water measurements of dissolved oxygen (DO) and the laboratory incubation of sediment cores to characterize spatial and temporal patterns in the ecosystem respiration (ER) of five arctic lakes spanning a gradient in size from 1 to 150 ha. Seasonal rates of ER throughout the water column ranged from < 0.001 to 0.034 mg L-1 h-1; sediment ER ranged from mg 6.1 m-2 h-1 to 50.7 mg m-2 h-1. Although there were significant differences in sediment ER among lakes, average water column ER did not differ significantly. Seasonal patterns of DO draw down were most often linear. However, within the water column above the deepest basin of each lake, rates were higher during autumn - winter than winter - spring, with the lowest rates typically found in the upper 70% of the water column and the highest rates near the bottom. ER measured near the bottom along the slope of lake basins was lower than that at the center of lake basins and closer in magnitude to water column ER. Spatial patters in free-water rates were reflected by sediment ER, which was 21 - 66 % higher in cores collected from the deepest point of lake basins than in sediments collected at shallower locations found at the margin of basins. These observations suggest that two mechanisms operating in tandem account for the higher apparent rates of DO drawdown found within lake basins during the winter. Higher local rates of sediment ER and, similar to observations in other lakes, the transport of DO depleted waters from lake margins to deep basins. Together they contribute to the formation of hypoxia in the deeper basins of lakes and the concentration of other respiratory products, with important implications for energy flow within lakes and carbon budgets across the arctic.

Microplastic pollution in deep-sea sediments.

PubMed

Van Cauwenberghe, Lisbeth; Vanreusel, Ann; Mees, Jan; Janssen, Colin R

2013-11-01

Microplastics are small plastic particles (<1 mm) originating from the degradation of larger plastic debris. These microplastics have been accumulating in the marine environment for decades and have been detected throughout the water column and in sublittoral and beach sediments worldwide. However, up to now, it has never been established whether microplastic presence in sediments is limited to accumulation hot spots such as the continental shelf, or whether they are also present in deep-sea sediments. Here we show, for the first time ever, that microplastics have indeed reached the most remote of marine environments: the deep sea. We found plastic particles sized in the micrometre range in deep-sea sediments collected at four locations representing different deep-sea habitats ranging in depth from 1100 to 5000 m. Our results demonstrate that microplastic pollution has spread throughout the world's seas and oceans, into the remote and largely unknown deep sea. Copyright © 2013. Published by Elsevier Ltd.

Paleohydrology on Mars constrained by mass balance and mineralogy of pre-Amazonian sodium chloride lakes

NASA Astrophysics Data System (ADS)

Melwani Daswani, M.; Kite, E. S.

2017-09-01

Chloride-bearing deposits on Mars record high-elevation lakes during the waning stages of Mars' wet era (mid-Noachian to late Hesperian). The water source pathways, seasonality, salinity, depth, lifetime, and paleoclimatic drivers of these widespread lakes are all unknown. Here we combine reaction-transport modeling, orbital spectroscopy, and new volume estimates from high-resolution digital terrain models, in order to constrain the hydrologic boundary conditions for forming the chlorides. Considering a T = 0°C system, we find that (1) individual lakes were >100 m deep and lasted decades or longer; (2) if volcanic degassing was the source of chlorine, then the water-to-rock ratio or the total water volume were probably low, consistent with brief excursions above the melting point and/or arid climate; (3) if the chlorine source was igneous chlorapatite, then Cl-leaching events would require a (cumulative) time of >10 years at the melting point; and (4) Cl masses, divided by catchment area, give column densities 0.1-50 kg Cl/m2, and these column densities bracket the expected chlorapatite-Cl content for a seasonally warm active layer. Deep groundwater was not required. Taken together, our results are consistent with Mars having a usually cold, horizontally segregated hydrosphere by the time chlorides formed.

Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing.

PubMed

Qian, Pei-Yuan; Wang, Yong; Lee, On On; Lau, Stanley C K; Yang, Jiangke; Lafi, Feras F; Al-Suwailem, Abdulaziz; Wong, Tim Y H

2011-03-01

The ecosystems of the Red Sea are among the least-explored microbial habitats in the marine environment. In this study, we investigated the microbial communities in the water column overlying the Atlantis II Deep and Discovery Deep in the Red Sea. Taxonomic classification of pyrosequencing reads of the 16S rRNA gene amplicons showed vertical stratification of microbial diversity from the surface water to 1500 m below the surface. Significant differences in both bacterial and archaeal diversity were observed in the upper (20 [corrected] and 50 m) and deeper layers (200 and 1500 m). There were no obvious differences in community structure at the same depth for the two sampling stations. The bacterial community in the upper layer was dominated by Cyanobacteria whereas the deeper layer harbored a large proportion of Proteobacteria. Among Archaea, Euryarchaeota, especially Halobacteriales, were dominant in the upper layer but diminished drastically in the deeper layer where Desulfurococcales belonging to Crenarchaeota became the dominant group. The results of our study indicate that the microbial communities sampled in this study are different from those identified in water column in other parts of the world. The depth-wise compositional variation in the microbial communities is attributable to their adaptations to the various environments in the Red Sea.

Modification of deep waters in Marguerite Bay, western Antarctic Peninsula, caused by topographic overflows

NASA Astrophysics Data System (ADS)

Venables, Hugh J.; Meredith, Michael P.; Brearley, J. Alexander

2017-05-01

Circumpolar Deep Water (CDW) intrudes from the mid-layers of the Antarctic Circumpolar Current onto the shelf of the western Antarctic Peninsula, providing a source of heat and nutrients to the regional ocean. It is well known that CDW is modified as it flows across the shelf, but the mechanisms responsible for this are not fully known. Here, data from underwater gliders with high spatial resolution are used to demonstrate the importance of detailed bathymetry in inducing multiple local mixing events. Clear evidence for overflows is observed in the glider data as water flows along a deep channel with multiple transverse ridges. The ridges block the densest waters, with overflowing water descending several hundred metres to fill subsequent basins. This vertical flow leads to entrainment of overlying colder and fresher water in localised mixing events. Initially this process leads to an increase in bottom temperatures due to the temperature maximum waters descending to greater depths. After several ridges, however, the mixing is sufficient to remove the temperature maximum completely and the entrainment of colder thermocline waters to depth reduces the bottom temperature, to approximately the same as in the source region of Marguerite Trough. Similarly, it is shown that deep waters of Palmer Deep are warmer than at the same depth at the shelf break. The exact details of the transformations observed are heavily dependent on the local bathymetry and water column structure, but glacially-carved troughs and shallow sills are a common feature of the bathymetry of polar shelves, and these types of processes may be a factor in determining the hydrographic conditions close to the coast across a wider area.

Interannual variability (1979-2013) of the North-Western Mediterranean deep water mass formation: past observation reanalysis and coupled ocean-atmosphere high-resolution modelling

NASA Astrophysics Data System (ADS)

Somot, Samuel; Houpert, Loic; Sevault, Florence; Testor, Pierre; Bosse, Anthony; Durrieu de Madron, Xavier; Dubois, Clotilde; Herrmann, Marine; Waldman, Robin; Bouin, Marie-Noëlle; Cassou, Christophe

2015-04-01

The North-Western Mediterranean Sea is known as one of the only place in the world where open-sea deep convection occurs (often up to more than 2000m) with the formation of the Western Mediterranean Deep Water (WMDW). This phenomena is mostly driven by local preconditioning of the water column and strong buoyancy losses during Winter. At the event scale, the WMDW formation is characterized by different phases (preconditioning, strong mixing, restratification and spreading), intense air-sea interaction and strong meso-scale activity but, on a longer time scale, it also shows a large interannual variability and may be strongly affected by climate change with impact on the regional biogeochemistry. Therefore observing, simulating and understanding the long-term temporal variability of the North-Western Mediterranean deep water formation is still today a very challenging task. We try here to tackle those issues thanks to (1) a thorough reanalysis of past in-situ observations (CTD, Argo, surface and deep moorings, gliders) and (2) an ERA-Interim driven simulation using a recently-developed fully coupled Regional Climate System Model (CNRM-RCSM4, Sevault et al. 2014). The multi-decadal simulation (1979-2013) is designed to be temporally and spatially homogeneous with a realistic chronology, a high resolution representation of both the regional ocean and atmosphere, specific initial conditions, a long-term spin-up and a full ocean-atmosphere coupling without constraint at the air-sea interface. The observation reanalysis allows to reconstruct interannual time series of deep water formation indicators (ocean surface variables, mixed layer depth, surface of the convective area, dense water volumes and characteristics of the deep water). Using the observation-based indicators and the model outputs, the 34 Winters of the period 1979-2013 are analysed in terms of weather regimes, related Winter air-sea fluxes, ocean preconditioning, mixed layer depth, surface of the convective area, deep water formation rate and long-term evolution of the deep water hydrology.

Microbial community profiles and microbial carbon cycling in Orca Basin

NASA Astrophysics Data System (ADS)

Hyde, A.; Teske, A.; Joye, S. B.; Montoya, J. P.; Nigro, L.

2016-12-01

Orca Basin is the largest seafloor brine pools in the world, covering over 400 km2 and reaching brine layer depths of 200 m. The brine pool contains water 8 times denser than the overlying seawater and is separated from the overlying water column by a sharp pycnocline that prevents vertical mixing. The transition from ambient seawater to brine occurs over 100 m [2150 to 2250 m] and is characterized by distinct changes in temperature, salinity, chemical conditions, oxygen, and organic matter concentration. The sharp brine-seawater interface results in a sharp pycnocline, which serves as a particle trap for sinking marine organic matter. Previous studies have used lipids to show that this organic-rich interface is host to an active microbial community which is potentially involved in deep-sea carbon remineralization and metal-cycling. Additionally, previous work on methane, ethane, and propane concentrations and 13C-isotopic signatures has also implicated the brine pool, as well as the interface, as sources for biogenic low-molecular weight hydrocarbons, resulting from the high concentration of suspended organic matter above and within the brine pool. Here we investigate the profiles of microbial community composition and metabolic potential in Orca Basin, ranging from seawater through the Orca Basin chemocline and into the deep Orca Basin brine. To characterize the microbial community and stratification, we used high-throughput bacterial and archaeal 16S rRNA gene sequencing of filtered water above, within, and below the Orca Basin chemocline. Our sequence data shows that three distinct and unique communities exist in the Orca Basin water column. We also use thermodynamic modeling of hydrocarbon degradation to investigate the favorability of C1-C3 hydrocarbon oxidation at the brine-seawater interface and the potential for Orca Basin to serve as a deep-sea hydrocarbon sink.

From the surface to the seafloor: How giant larvaceans transport microplastics into the deep sea.

PubMed

Katija, Kakani; Choy, C Anela; Sherlock, Rob E; Sherman, Alana D; Robison, Bruce H

2017-08-01

Plastic waste is a pervasive feature of marine environments, yet little is empirically known about the biological and physical processes that transport plastics through marine ecosystems. To address this need, we conducted in situ feeding studies of microplastic particles (10 to 600 μm in diameter) with the giant larvacean Bathochordaeus stygius. Larvaceans are abundant components of global zooplankton assemblages, regularly build mucus "houses" to filter particulate matter from the surrounding water, and later abandon these structures when clogged. By conducting in situ feeding experiments with remotely operated vehicles, we show that giant larvaceans are able to filter a range of microplastic particles from the water column, ingest, and then package microplastics into their fecal pellets. Microplastics also readily affix to their houses, which have been shown to sink quickly to the seafloor and deliver pulses of carbon to benthic ecosystems. Thus, giant larvaceans can contribute to the vertical flux of microplastics through the rapid sinking of fecal pellets and discarded houses. Larvaceans, and potentially other abundant pelagic filter feeders, may thus comprise a novel biological transport mechanism delivering microplastics from surface waters, through the water column, and to the seafloor. Our findings necessitate the development of tools and sampling methodologies to quantify concentrations and identify environmental microplastics throughout the water column.

From the surface to the seafloor: How giant larvaceans transport microplastics into the deep sea

PubMed Central

Katija, Kakani; Choy, C. Anela; Sherlock, Rob E.; Sherman, Alana D.; Robison, Bruce H.

2017-01-01

Plastic waste is a pervasive feature of marine environments, yet little is empirically known about the biological and physical processes that transport plastics through marine ecosystems. To address this need, we conducted in situ feeding studies of microplastic particles (10 to 600 μm in diameter) with the giant larvacean Bathochordaeus stygius. Larvaceans are abundant components of global zooplankton assemblages, regularly build mucus “houses” to filter particulate matter from the surrounding water, and later abandon these structures when clogged. By conducting in situ feeding experiments with remotely operated vehicles, we show that giant larvaceans are able to filter a range of microplastic particles from the water column, ingest, and then package microplastics into their fecal pellets. Microplastics also readily affix to their houses, which have been shown to sink quickly to the seafloor and deliver pulses of carbon to benthic ecosystems. Thus, giant larvaceans can contribute to the vertical flux of microplastics through the rapid sinking of fecal pellets and discarded houses. Larvaceans, and potentially other abundant pelagic filter feeders, may thus comprise a novel biological transport mechanism delivering microplastics from surface waters, through the water column, and to the seafloor. Our findings necessitate the development of tools and sampling methodologies to quantify concentrations and identify environmental microplastics throughout the water column. PMID:28835922

Methylation of inorganic mercury in polar marine waters

NASA Astrophysics Data System (ADS)

Lehnherr, Igor; St. Louis, Vincent L.; Hintelmann, Holger; Kirk, Jane L.

2011-05-01

Monomethylmercury is a neurotoxin that accumulates in marine organisms, with serious implications for human health. The toxin is of particular concern to northern Inuit peoples, for example, whose traditional diets are composed primarily of marine mammals and fish. The ultimate source of monomethylmercury to marine organisms has remained uncertain, although various potential sources have been proposed, including export from coastal and deep-sea sediments and major river systems, atmospheric deposition and water-column production. Here, we report results from incubation experiments in which we added isotopically labelled inorganic mercury and monomethylmercury to seawater samples collected from a range of sites in the Canadian Arctic Archipelago. Monomethylmercury formed from the methylation of inorganic mercury in all samples. Demethylation of monomethylmercury was also observed in water from all sites. We determined steady-state concentrations of monomethylmercury in marine waters by incorporating the rate constants for monomethylmercury formation and degradation derived from these experiments into a numerical model. We estimate that the conversion of inorganic mercury to monomethylmercury in the water column accounts for around 47% (+/-62%, standard deviation) of the monomethylmercury present in polar marine waters, with site-to-site differences in inorganic mercury and monomethylmercury levels accounting for most of the variability. We suggest that water-column methylation of inorganic mercury is a significant source of monomethylmercury in pelagic marine food webs in the Arctic, and possibly in the world's oceans in general.

A heat-pulse flowmeter for measuring minimal discharge rates in boreholes

USGS Publications Warehouse

Hess, A.E.

1982-01-01

The U.S. Geological Survey has tested a borehole-configured heat-pulse flowmeter which has good low-velocity flow-measuring sensitivity. The flowmeter was tested in the laboratory in 51-, 102-, and 152-millimeter-diameter columns using water velocities ranging from 0.35 to 250 millimeters per second. The heat-pulse flowmeter also was tested in a 15-meter-deep granite test pit with controlled water flow, and in a 58-meter-deep borehole in sedimentary materials. The flowmeter's capability to detect and measure naturally occurring, low-velocity, thermally induced convection currents in boreholes was demonstrated. Further improvements to the heat-pulse-flowmeter system are needed to increase its reliability and improve its response through four-conductor logging cable.

Experimental Design for One Dimensional Electrolytic Reactive Barrier for Remediation of Munition Constituent in Groundwater

PubMed Central

Gent, David B.; Wani, Altaf; Alshawabkeh, Akram N.

2012-01-01

A combination of direct electrochemical reduction and in-situ alkaline hydrolysis has been proposed to decompose energetic contaminants such as 1,3,5-Trinitroperhydro- 1,3,5-triazine and 2,4,6-Trinitrotoluene (RDX) in deep aquifers. This process utilizes natural groundwater convection to carry hydroxide produced by an upstream cathode to remove the contaminant at the cathode as well as in the pore water downstream as it migrates toward the anode. Laboratory evaluation incorporated fundamental principles of column design coupled with reactive contaminant modeling including electrokinetics transport. Batch and horizontal sand-packed column experiments included both alkaline hydrolysis and electrochemical treatment to determine RDX decomposition reaction rate coefficients. The sand packed columns simulated flow through a contaminated aquifer with a seepage velocity of 30.5 cm/day. Techniques to monitor and record the transient electric potential, hydroxide transport and contaminant concentration within the column were developed. The average reaction rate coefficients for both the alkaline batch (0.0487 hr−1) and sand column (0.0466 hr−1) experiments estimated the distance between the cathode and anode required to decompose 0.5 mg/L RDX to the USEPA drinking water lifetime Health Advisory level of 0.002 mg/L to be 145 and 152 cm. PMID:23472044

Dissolved Rare Earth Elements in the US GEOTRACES North Atlantic Section

NASA Astrophysics Data System (ADS)

Shiller, A. M.

2016-12-01

The rare earth elements (REEs) are a unique chemical set wherein there are systematic changes in geochemical behavior across the series. Furthermore, while most REEs are in the +III oxidation state, Ce and Eu can be in other oxidation states leading to distinct characteristics of those elements. Thus, the geochemical properties of the REEs make them particularly useful tools for inquiring into various geochemical processes. As part of the US GEOTRACES effort, we determined dissolved REEs and Y at 32 stations across the North Atlantic during US cruises GT10 and GT11 along a meridional transect from Lisbon to the Cape Verde Islands and a zonal transect from Cape Cod to the Mauritanian coast. While profiles are similar to previous reports, the high spatial resolution of the section allows for better elucidation of processes. Light rare earths (LREEs) show removal in the upper water column with a minimum at the chlorophyll maximum. LREE concentrations then increase into the oxygen minimum followed by a slight decrease and fairly constant concentrations in the mid-water column followed by an increase into the deep and bottom waters. Heavy rare earths (HREEs) show a more monotonic increase with depth. We also take advantage of a previously published water mass analysis for the section to estimate that most of the deep water changes can be explained by conservative mixing of waters with different pre-formed REE concentrations. Nonetheless, the pattern of LREE shallow water removal followed by regeneration, possible re-scavenging, and then deep water input is still preserved. Other features of note include an increase in LREEs in the strong oxygen minimum zone off Mauritania, consistent with an association of REE cycling with the redox cycles of Fe and Mn. Also along the eastern margin, but below the oxygen minimum, a small but distinct increase in the cerium and europium anomalies is observed, consistent with terrigenous input. In hydrothermally influenced waters along the mid-Atlantic Ridge, there are increases in Ce/Ce*, Eu/Eu*, and Y/Ho but a decrease in Nd/Yb and in REE concentrations. Surface water distributions are more consistent with elements influenced by margin inputs than with atmospheric input.

Transport of sludge-derived organic pollutants to deep-sea sediments at deep water dump site 106

USGS Publications Warehouse

Takada, H.; Farrington, J.W.; Bothner, Michael H.; Johnson, C.G.; Tripp, B.W.

1994-01-01

Linear alkylbenzenes (LABs), coprostanol and epi-coprostanol, were detected in sediment trap and bottom sediment samples at the Deep Water Dump Site 106 located 185 km off the coast of New Jersey, in water depths from 2400 to 2900 m. These findings clearly indicate that organic pollutants derived from dumped sludge are transported through the water column and have accumulated on the deep-sea floor. No significant difference in LABs isomeric composition was observed among sludge and samples, indicating little environmental biodegradation of these compounds. LABs and coprostanol have penetrated down to a depth of 6 cm in sediment, indicating the mixing of these compounds by biological and physical processes. Also, in artificially resuspended surface sediments, high concentrations of LABs and coprostanols were detected, implying that sewage-derived organic pollutants initially deposited on the deep-sea floor can be further dispersed by resuspension and transport processes. Small but significant amounts of coprostanol were detected in the sediment from a control site at which no LABs were detected. The coprostanol is probably derived from feces of marine mammals and sea birds and/or from microbial or geochemical transformations of cholesterol. Polcyclic aromatic hydrocarbons (PAHs) in sediment trap samples from the dump site were largely from the sewage sludge and had a mixed petroleum and pyrogenic composition. In contrast, PAHs in sediments in the dump site were mainly pyrogenic; contributed either from sewage sludge or from atmospheric transport to the overlying waters. & 1994 American Chemical Society.

The biological pump and lower trophic level controls on carbon cycling in Lake Superior: Insights from a multi-pronged study

NASA Astrophysics Data System (ADS)

Schreiner, K. M.; Bramburger, A.; Ozersky, T.; Sheik, C.; Steinman, B. A.

2016-02-01

Lake Superior is the largest freshwater lake in the world, supporting economically important fisheries and providing drinking water to hundreds of thousands of people. In recent decades, summer surface water temperature and the intensity and duration of water column stratification in the lake has increased steadily. These physical changes have resulted in significant perturbations to lower trophic level ecosystem characteristics. Recent observations of Great Lakes plankton assemblages have revealed multi-decadal patterns of community reorganization, with increased relative abundance of taxa characteristic of warmer waters. These changes, coupled with changing nutrient concentrations and colonization by non-native taxa, threaten to shift trophic structure and carbon dynamics at the bottom of the food web. To this end, this study seeks to quantify the impacts of this ecosystem shift on carbon fixation, the biological pump, and organic carbon cycling in Lake Superior. Utilizing a combined sampling approach, in the summer of 2015 we collected water, sediment, and biological samples across a nearshore-to-offshore gradient in the western arm of Lake Superior. Analyses included the community composition of bacteria, archaea, phytoplankton, and zooplankton; water column carbon and nutrient speciation; algal pigments and pigment degradation products; and net primary productivity. The collection of surface sediments allowed for additional assessment of benthic-pelagic coupling. The novel combination of this wide-ranging set of analyses to a locally and globally important water body like Lake Superior allowed us to fully assess the interactions between lower trophic level biology and carbon and nutrient cycling throughout the water column. Preliminary data indicates that microbial community composition was variable across the western arm of Lake Superior and showed signs of stratification at individual stations (>100 m deep). Sample collection occurred soon after lake stratification in July 2015, and the presence of a deep chlorophyll maximum was noted. The results shed light on the functioning of the biological pump and nutrient and carbon dynamics in a changing ecosystem and provides insight on how further change in Lake Superior and other aquatic systems will affect ecosystem function and services.

Benthic Habitat Mapping by Combining Lyzenga’s Optical Model and Relative Water Depth Model in Lintea Island, Southeast Sulawesi

NASA Astrophysics Data System (ADS)

Hafizt, M.; Manessa, M. D. M.; Adi, N. S.; Prayudha, B.

2017-12-01

Benthic habitat mapping using satellite data is one challenging task for practitioners and academician as benthic objects are covered by light-attenuating water column obscuring object discrimination. One common method to reduce this water-column effect is by using depth-invariant index (DII) image. However, the application of the correction in shallow coastal areas is challenging as a dark object such as seagrass could have a very low pixel value, preventing its reliable identification and classification. This limitation can be solved by specifically applying a classification process to areas with different water depth levels. The water depth level can be extracted from satellite imagery using Relative Water Depth Index (RWDI). This study proposed a new approach to improve the mapping accuracy, particularly for benthic dark objects by combining the DII of Lyzenga’s water column correction method and the RWDI of Stumpt’s method. This research was conducted in Lintea Island which has a high variation of benthic cover using Sentinel-2A imagery. To assess the effectiveness of the proposed new approach for benthic habitat mapping two different classification procedures are implemented. The first procedure is the commonly applied method in benthic habitat mapping where DII image is used as input data to all coastal area for image classification process regardless of depth variation. The second procedure is the proposed new approach where its initial step begins with the separation of the study area into shallow and deep waters using the RWDI image. Shallow area was then classified using the sunglint-corrected image as input data and the deep area was classified using DII image as input data. The final classification maps of those two areas were merged as a single benthic habitat map. A confusion matrix was then applied to evaluate the mapping accuracy of the final map. The result shows that the new proposed mapping approach can be used to map all benthic objects in all depth ranges and shows a better accuracy compared to that of classification map produced using only with DII.

Dynamic behaviour of natural oil droplets through the water column in deep-water environment: the case of the Lower Congo Basin

NASA Astrophysics Data System (ADS)

Jatiault, R.; Dhont, D.; Loncke, L.; Durrieu De Madron, X.; Dubucq, D.; Channelliere, C.; Bourrin, F.

2017-12-01

Key words: Hydrocarbon seepage, Oil Slick, Lower Congo Basin, Underwater deflection, Deep-water Pockmark, Ascent speedThe space-borne imagery provides a significant means to locate active oil seeps and to estimate the expelled volume in the marine environment. The analysis of numerous overlapping satellite images revealed an abundant volume of 4400 m3 of oil naturally reaching the sea surface per year, expelled from more than a hundred seep sites through the Lower Congo Basin. The active seepage area is located in the distal compressional province of the basin where salt napes and squeezed diapirs. The integration of current data was used to link accurately sea surface manifestations of natural oil leakages with active fluid flow features on the seafloor. A mooring with ADCPs (Acoustic Doppler Current Profilers) distributed throughout the water column provided an efficient calibration tool to evaluate the horizontal deflection of oil droplets. Using a Eulerian propagation model that considered a range of probable ascent speeds, we estimated the oil migration pathways through the water column using two different approaches. The first approach consisted in simulating the backwards trajectory of oil droplets using sea surface oil slicks locations and concomitant current measurements. The second method analyzed the spatial spreading of the surfacing signatures of natural oil slicks based on 21 years of satellite observations. The location of the surfacing points of oil droplets at the sea surface is restricted to a circle of 2.5 km radius around the release point at the seafloor. Both approaches provided a range of ascent speeds of oil droplets between 3 to 8 cm.s-1. The low deflection values validate the near-vertical links between the average surfacing area of oil slicks at the sea surface with specific seafloor disturbances (i.e. pockmarks or mounds) known to expel fluids.

Wind effects on coastal zone color scanner chlorophyll patterns in the U.S. Mid-Atlantic Bight during spring 1979

NASA Technical Reports Server (NTRS)

Eslinger, David L.; Iverson, Richard L.

1986-01-01

Coastal zone color scanner (CZCS) chlorophyll concentration increases in the Mid-Atlantic Bight were associated with high wind speeds in continental shelf waters during March and May 1979. Maximum spring CZCS chlorophyll concentrations occurred during April when the water column was not thermally stratified and were spatially and temporally associated with reductions in wind speed both in onshelf and in offshelf regions. Increased chlorophyll concentrations in offshelf waters were associated with high wind speeds during May when a deep chlorophyll maximum was present. Chlorophyll patchiness was observed on length scales typical of those controlled by biological processes during the April low-wind period but not during March or May when wind speeds were greater. The spring CZCS chlorophyll maximum in the southern portion of the Mid-Atlantic Bight occurred in response to a reduction in mixed layer depth caused by decreased wind speeds and not by increased water column stratification.

Drivers of Water Column Calcium Carbonate Fluxes and Dissolution in the Gulf of Maine: Impacts on the Carbon Cycle

NASA Astrophysics Data System (ADS)

Pilskaln, C. H.; Wang, A. Z.; Lawson, G. L.; Hayashi, K.; Salisbury, J.

2016-02-01

Recent studies indicate that the U.S. Northeast coastal region, particularly the Gulf of Maine (GoME), may be more susceptible to ocean acidification (OA) than previously thought due to the low buffer capacity, low pH, and low calcium carbonate saturation measured in the region. In particular, sub-surface waters of the GoME already experience under-saturation with respect to aragonite in spring and summer and recent data suggest that water-column aragonite dissolution may occur throughout the year, even when aragonite is slightly over-saturated. This dissolution process appears associated with organic carbon remineralization in the extensive benthic nepheloid layers and may thus represent a major control over the calcium carbonate (CaCO3) budget of deep, near-bottom waters of the GoME. These findings are surprising for shallow, non-upwelling shelf systems and have important implications for the CaCO3 cycle, shell-building organisms, and the GoME planktonic ecosystem. Additionally, freshening of the GoME over the past several decades due to an increase in low-salinity water input originating in the Labrador Sea may further decrease seawater pH and aragonite saturation in the gulf. We present a variety of biogeochemical data that suggest linkages between potential water column CaCO3 dissolution and their impacts on the GoME carbon cycle.

Stability of column-supported embankments.

DOT National Transportation Integrated Search

2006-01-01

Column-supported embankments have a great potential for application in the coastal regions of Virginia, where highway embankments are often constructed on soft ground. The columns can be driven piles, vibro-concrete columns, deep-mixing-method column...

Chronobiology of deep-water decapod crustaceans on continental margins.

PubMed

Aguzzi, Jacopo; Company, Joan B

2010-01-01

Species have evolved biological rhythms in behaviour and physiology with a 24-h periodicity in order to increase their fitness, anticipating the onset of unfavourable habitat conditions. In marine organisms inhabiting deep-water continental margins (i.e. the submerged outer edges of continents), day-night activity rhythms are often referred to in three ways: vertical water column migrations (i.e. pelagic), horizontal displacements within benthic boundary layer of the continental margin, along bathymetric gradients (i.e. nektobenthic), and endobenthic movements (i.e. rhythmic emergence from the substrate). Many studies have been conducted on crustacean decapods that migrate vertically in the water column, but much less information is available for other endobenthic and nektobenthic species. Also, the types of displacement and major life habits of most marine species are still largely unknown, especially in deep-water continental margins, where steep clines in habitat factors (i.e. light intensity and its spectral quality, sediment characteristics, and hydrography) take place. This is the result of technical difficulties in performing temporally scheduled sampling and laboratory testing on living specimens. According to this scenario, there are several major issues that still need extensive research in deep-water crustacean decapods. First, the regulation of their behaviour and physiology by a biological clock is almost unknown compared to data for coastal species that are easily accessible to direct observation and sampling. Second, biological rhythms may change at different life stages (i.e. size-related variations) or at different moments of the reproductive cycle (e.g. at egg-bearing) based on different intra- and interspecific interactions. Third, there is still a major lack of knowledge on the links that exist among the observed bathymetric distributions of species and selected autoecological traits that are controlled by their biological clock, such as the diel rhythm of behaviour. Species evolved in a photically variable environment where intra- and inter-specific interactions change along with the community structure over 24 h. Accordingly, the regulation of their biology through a biological clock may be the major evolutionary constraint that is responsible for their reported bathymetric distributions. In this review, our aim is to propose a series of innovative guidelines for a discussion of the modulation of behavioural rhythms of adult decapod crustaceans, focusing on the deep waters of the continental margin areas of the Mediterranean as a paradigm for other marine zones of the world. Copyright © 2010 Elsevier Ltd. All rights reserved.

Neodymium isotopic variations in Northwest Pacific waters

NASA Astrophysics Data System (ADS)

Amakawa, Hiroshi; Nozaki, Yoshiyuki; Alibo, Dia Sotto; Zhang, Jing; Fukugawa, Kiyotaka; Nagai, Hisao

2004-02-01

Four vertical profiles of the concentration and isotopic composition of Nd in seawater were obtained in the western North Pacific. Two profiles from the Kuroshio Current regime showed congruently that although the Nd concentration increases gradually with depth, its isotopic composition varies significantly with depth depending upon the water mass occupying the water column. The high-salinity Kuroshio waters originating from the North Pacific Tropical Water (NPTW) carry the least radiogenic Nd (ɛ Nd = -7.4 to -8.7) to this region at ˜250 m from the western margin continental shelves, most likely from the East China Sea. The Nd isotopic compositions in the North Pacific Intermediate Water (NPIW) that occurs at 600 to 1000 m in the subtropical region are fairly uniform at ɛ Nd = -3.7. The profile data from the ˜38° to 40°N Kuroshio/Oyashio mixed water region off Sanriku of Honshu, Japan, also suggest that the newest NPIW with ɛ Nd = -3.2 is formed there by the mixing of various source waters, and the radiogenic component of Nd is derived mainly from the Oyashio waters. In the Pacific Deep Water (PDW) below ˜1000 m, the Nd isotopic composition is neither vertically nor horizontally homogeneous, suggesting that it serves as a useful tracer for sluggish deep water circulation as well. Two profiles from the Izu-Ogasawara Trench showed a minimum ɛ Nd value at ˜2000 m, suggesting that there exists a horizontal advective flow in the vicinity of Honshu, Japan. There is some evidence from other chemical properties to support this observation. The waters below 4000 m including those within the trench in the subtropical region have ɛ Nd values of around -5, suggesting that the deep waters are fed from the south along the western boundary, ultimately from the Antarctic Bottom Water (AABW) in the South Pacific. This extends up to ˜40°N along the Japanese Islands. In the subarctic region (>˜42°N), the waters have more radiogenic Nd with ɛ Nd > -4.0 throughout the water column, presumably due to the supply of Nd by weathering in such igneous provinces as the Kuril-Kamchatska-Aleutian Island chain. The lateral inhomogeneity of the Nd isotopic composition in PDW suggests that there may be different circulation and mixing regimes in the North Pacific Basin.

Variability of neodymium isotopes associated with planktonic foraminifera in the Pacific Ocean during the Holocene and Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Hu, Rong; Piotrowski, Alexander M.; Bostock, Helen C.; Crowhurst, Simon; Rennie, Victoria

2016-08-01

The deep Pacific Ocean holds the largest oceanic reservoir of carbon which may interchange with the atmosphere on climatologically important timescales. The circulation of the deep Pacific during the Last Glacial Maximum (LGM), however, is not well understood. Neodymium (Nd) isotopes of ferromanganese oxide coatings precipitated on planktonic foraminifera are a valuable proxy for deep ocean water mass reconstruction in paleoceanography. In this study, we present Nd isotope compositions (εNd) of planktonic foraminifera for the Holocene and the LGM obtained from 55 new sites widely distributed in the Pacific Ocean. The Holocene planktonic foraminiferal εNd results agree with the proximal seawater data, indicating that they provide a reliable record of modern bottom water Nd isotopes in the deep Pacific. There is a good correlation between foraminiferal εNd and seawater phosphate concentrations (R2 = 0.80), but poorer correlation with silicate (R2 = 0.37). Our interpretation is that the radiogenic Nd isotope is added to the deep open Pacific through particle release from the upper ocean during deep water mass advection and aging. The data thus also imply the Nd isotopes in the Pacific are not likely to be controlled by silicate cycling. In the North Pacific, the glacial Nd isotopic compositions are similar to the Holocene values, indicating that the Nd isotope composition of North Pacific Deep Water (NPDW) remained constant (-3.5 to -4). During the LGM, the southwest Pacific cores throughout the water column show higher εNd corroborating previous studies which suggested a reduced inflow of North Atlantic Deep Water to the Pacific. However, the western equatorial Pacific deep water does not record a corresponding radiogenic excursion, implying reduced radiogenic boundary inputs during the LGM probably due to a shorter duration of seawater-particle interaction in a stronger glacial deep boundary current. A significant negative glacial εNd excursion is evident in mid-depth (1-2 km) cores of the eastern equatorial Pacific (EEP) which may suggest a stronger influence of NPDW return flow to the core sites and decreased local input in the EEP. Taken together, our Nd records do not support a dynamically slower glacial Pacific overturning circulation, and imply that the increased carbon inventory of Pacific deep water might be due to poor high latitude air-sea exchange and increased biological pump efficiency in glacial times.

Interfacing a one-dimensional lake model with a single-column atmospheric model: 2. Thermal response of the deep Lake Geneva, Switzerland under a 2 × CO2 global climate change

NASA Astrophysics Data System (ADS)

Perroud, Marjorie; Goyette, StéPhane

2012-06-01

In the companion to the present paper, the one-dimensional k-ɛ lake model SIMSTRAT is coupled to a single-column atmospheric model, nicknamed FIZC, and an application of the coupled model to the deep Lake Geneva, Switzerland, is described. In this paper, the response of Lake Geneva to global warming caused by an increase in atmospheric carbon dioxide concentration (i.e., 2 × CO2) is investigated. Coupling the models allowed for feedbacks between the lake surface and the atmosphere and produced changes in atmospheric moisture and cloud cover that further modified the downward radiation fluxes. The time evolution of atmospheric variables as well as those of the lake's thermal profile could be reproduced realistically by devising a set of adjustable parameters. In a "control" 1 × CO2 climate experiment, the coupled FIZC-SIMSTRAT model demonstrated genuine skills in reproducing epilimnetic and hypolimnetic temperatures, with annual mean errors and standard deviations of 0.25°C ± 0.25°C and 0.3°C ± 0.15°C, respectively. Doubling the CO2 concentration induced an atmospheric warming that impacted the lake's thermal structure, increasing the stability of the water column and extending the stratified period by 3 weeks. Epilimnetic temperatures were seen to increase by 2.6°C to 4.2°C, while hypolimnion temperatures increased by 2.2°C. Climate change modified components of the surface energy budget through changes mainly in air temperature, moisture, and cloud cover. During summer, reduced cloud cover resulted in an increase in the annual net solar radiation budget. A larger water vapor deficit at the air-water interface induced a cooling effect in the lake.

δ13C and δ15N Values of Sediment-trap Particles in the Japan and Yamato Basins and Comparison with the Core-top Values in the East/Japan Sea

NASA Astrophysics Data System (ADS)

Khim, Boo-Keun; Otosaka, Shigeyoshi; Park, Kyung-Ae; Noriki, Shinichiro

2018-03-01

Investigation of sediment-trap deployments in the East/Japan Sea (EJS) showed that distinct seasonal variations in particulate organic carbon (POC) fluxes of intermediate-water sediment-traps clearly corresponded to changes in chlorophyll a concentrations estimated from SeaWiFS data. The prominent high POC flux periods (e.g., March) were strongly correlated with the enhanced surface-water phytoplankton blooms. Deep-water sedimenttraps exhibited similar variation patterns to intermediate-water sediment-traps. However, their total flux and POC flux were higher than those of intermediate-water sediment-traps during some months (e.g., April and May), indicating the lateral delivery of some particles to the deep-water sediment-traps. Distinct seasonal δ13C and δ15N variations in settling particles of the intermediate-water sediment-traps were observed, strongly supporting the notion of seasonal primary production. Seasonal variations in δ13C and δ15N values from the deep-water sediment-traps were similar to those of the intermediate-water sediment-traps. However, the difference in δ13C and δ15N values between the intermediate-water and the deepwater sediment-traps may be attributed to degradation of organic matter as it sank through the water column. Comparison of fluxweighted δ13C and δ15N mean values between the deep-water sediment-traps and the core-top sediments showed that strong selective loss of organic matter components (lipids) depleted in 13C and 15N occurred during sediment burial. Nonetheless, the results of our study indicate that particles in the deep-water sediment-trap deposited as surface sediments on the seafloor preserve the record of surface-water conditions, highlighting the usefulness of sedimentary δ13C and δ15N values as a paleoceanographic application in the EJS.

The comparative limnology of Lakes Nyos and Monoun, Cameroon

USGS Publications Warehouse

Kling, George; Evans, William C; Tanyileke, Gregory

2015-01-01

Lakes Nyos and Monoun are known for the dangerous accumulation of CO2 dissolved in stagnant bottom water, but the shallow waters that conceal this hazard are dilute and undergo seasonal changes similar to other deep crater lakes in the tropics. Here we discuss these changes with reference to climatic and water-column data collected at both lakes during the years following the gas release disasters in the mid-1980s. The small annual range in mean daily air temperatures leads to an equally small annual range of surface water temperatures (ΔT ~6–7 °C), reducing deep convective mixing of the water column. Weak mixing aids the establishment of meromixis, a requisite condition for the gradual buildup of CO2 in bottom waters and perhaps the unusual condition that most explains the rarity of such lakes. Within the mixolimnion, a seasonal thermocline forms each spring and shallow diel thermoclines may be sufficiently strong to isolate surface water and allow primary production to reduce PCO2 below 300 μatm, inducing a net influx of CO2 from the atmosphere. Surface water O2 and pH typically reach maxima at this time, with occasional O2 oversaturation. Mixing to the chemocline occurs in both lakes during the winter dry season, primarily due to low humidity and cool night time air temperature. An additional period of variable mixing, occasionally reaching the chemocline in Lake Monoun, occurs during the summer monsoon season in response to increased frequency of major storms. The mixolimnion encompassed the upper ~40–50 m of Lake Nyos and upper ~15–20 m of Lake Monoun prior to the installation of degassing pipes in 2001 and 2003, respectively. Degassing caused chemoclines to deepen rapidly. Piping of anoxic, high-TDS bottom water to the lake surface has had a complex effect on the mixolimnion. Algal growth stimulated by increased nutrients (N and P) initially stimulated photosynthesis and raised surface water O2 in Lake Nyos, but O2 removal through oxidation of iron was also enhanced and appeared to dominate at Lake Monoun. Depth-integrated O2 contents decreased in both lakes as did water transparency. No dangerous instabilities in water-column structure were detected over the course of degassing. While Nyos-type lakes are extremely rare, other crater lakes can pose dangers from gas releases and monitoring is warranted.

Water column distribution of stable isotopes and carbonate properties in the South-eastern Levantine basin (Eastern Mediterranean): Vertical and temporal change

NASA Astrophysics Data System (ADS)

Sisma-Ventura, G.; Yam, R.; Kress, N.; Shemesh, A.

2016-06-01

Water column distributions of the oxygen isotopic composition of sea-water (δ18OSW) and the stable carbon isotope ratio of dissolved inorganic carbon (δ13CDIC), total alkalinity (AT) and the pH (total scale) at 25 °C (25 °CpHTotal) were investigated along the Southeast Mediterranean (SE-Med) shelf and open water, during 2009-2010. While, the vertical profiles of δ18OSW lacked a clear depth signature, those of δ13CDIC were characterized by a structure that reflects the major water masses in the Levantine basin, with noticeable vertical gradients. The δ13CDIC Suess effect of the Levantine water column was estimated from the difference between the average profiles of 1988 and 2009-2010 (Δδ13CDIC). We observed δ13CDIC temporal change, which indicates propagation of anthropogenic CO2 (Cant) to depth of about 700 m. The Modified Atlantic Water (MAW; 0-200 m) and the Levantine Intermediate Water (LIW; 200-400 m) exhibited a depletion rate of - 0.13 ± 0.03 and - 0.11 ± 0.03‰ decade- 1, respectively, representing 50% of the atmospheric change, while the deep water of the Adriatic source (700-1300 m) did not change during this period. A Δδ13CDIC depletion trend was also recognized below 1350 m, corresponding to the Aegean source deep water (EMDWAeg) and therefore associated to the Eastern Mediterranean Transient (EMT) event. Anthropogenic CO2 accumulation rate of 0.38 ± 0.12 mol C m- 2 yr- 1 for the upper 700 m of the SE-Med, over the last 22 yr, was estimated on the basis of mean depth-integrated δ13CDIC Suess effect profile. Our results confirm lower accumulation rate than that of the subtropical North Atlantic, resulting due to the super-saturation with respect to CO2 of the well-stratified Levantine surface water. High pCO2 saturation during summer (+ 150 μatm), in oppose to a small degree of under-saturation in winter (- 30 μatm) was calculated from surface water AT and 25 °CpHTotal data. However, the δ13CDIC depletion trend of the LIW and the EMDWAeg supports isotopically light Cant penetrating into the Levantine interior during convection events, such as the EMT.

Nitrogen isotopic composition of nitrate in the South China Sea: A clue to the origin of nitrogen

NASA Astrophysics Data System (ADS)

Yang, Z.; Chen, J.; Chen, M.; Ran, L.; Li, H.; Zhu, Y.; Wang, C.; Ji, Z.; Zhang, J.; Zhang, D.

2016-02-01

Nitrogen isotopic composition of water column nitrate was measured in the South China Sea to clarify the sources of nitrogen. The δ15NNO3 value in deep water (5.4±0.2‰) was higher than the average deep oceanic δ15NNO3 ( 5‰), and a weak δ15NNO3 maximum (5.9±0.2‰) was observed at 500 m depth, matching the salinity minimum. These indicated the intrusion of the North Pacific Water which carried nitrate with a high δ15NNO3 and showed a similar δ15NNO3 distribution profile with the South China Sea. The high N* (1.74±0.23 μmol/L) combined with the low δ15NNO3 (4.7±0.2‰) at 100 m depth indicated that N2 fixation (and possibly Atmospheric Deposition) introduces new N to the surface ocean. The distribution of δ15N values of nitrate, sinking particles and surface sediment suggest that laterally-advected sediments may be a source of nitrogen to the deep ocean.

Deep-sea oil plume enriches psychrophilic oil-degrading bacteria

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hazen, T.C.; Dubinsky, E.A.; DeSantis, T.Z.

The biological effects and expected fate of the vast amount of oil in the Gulf of Mexico from the Deepwater Horizon blowout are unknown owing to the depth and magnitude of this event. Here, we report that the dispersed hydrocarbon plume stimulated deep-sea indigenous {gamma}-Proteobacteria that are closely related to known petroleum degraders. Hydrocarbon-degrading genes coincided with the concentration of various oil contaminants. Changes in hydrocarbon composition with distance from the source and incubation experiments with environmental isolates demonstrated faster-than-expected hydrocarbon biodegradation rates at 5 C. Based on these results, the potential exists for intrinsic bioremediation of the oil plumemore » in the deep-water column without substantial oxygen drawdown.« less

High-resolution modeling of local air-sea interaction within the Marine Continent using COAMPS

NASA Astrophysics Data System (ADS)

Jensen, T. G.; Chen, S.; Flatau, M. K.; Smith, T.; Rydbeck, A.

2016-12-01

The Maritime Continent (MC) is a region of intense deep atmospheric convection that serves as an important source of forcing for the Hadley and Walker circulations. The convective activity in the MC region spans multiple scales from local mesoscales to regional scales, and impacts equatorial wave propagation, coupled air-sea interaction and intra seasonal oscillations. The complex distribution of islands, shallow seas with fairly small heat storage and deep seas with large heat capacity is challenging to model. Diurnal convection over land-sea is part of a land-sea breeze system on a small scale, and is highly influenced by large variations in orography over land and marginal seas. Daytime solar insolation, run-off from the Archipelago and nighttime rainfall tends to stabilize the water column, while mixing by tidal currents and locally forced winds promote vertical mixing. The runoff from land and rivers and high net precipitation result in fresh water lenses that enhance vertical stability in the water column and help maintain high SST. We use the fully coupled atmosphere-ocean-wave version of the Coupled Ocean-Atmosphere Mesoscale Prediction System (COAMPS) developed at NRL with resolution of a few kilometers to investigate the air-sea interaction associated with the land-sea breeze system in the MC under active and inactive phases of the Madden-Julian Oscillation. The high resolution enables simulation of strong SST gradients associated with local upwelling in deeper waters and strong salinity gradients near rivers and from heavy precipitation.

Radiolarians decreased silicification as an evolutionary response to reduced Cenozoic ocean silica availability.

PubMed

Lazarus, David B; Kotrc, Benjamin; Wulf, Gerwin; Schmidt, Daniela N

2009-06-09

It has been hypothesized that increased water column stratification has been an abiotic "universal driver" affecting average cell size in Cenozoic marine plankton. Gradually decreasing Cenozoic radiolarian shell weight, by contrast, suggests that competition for dissolved silica, a shared nutrient, resulted in biologic coevolution between radiolaria and marine diatoms, which expanded dramatically in the Cenozoic. We present data on the 2 components of shell weight change--size and silicification--of Cenozoic radiolarians. In low latitudes, increasing Cenozoic export of silica to deep waters by diatoms and decreasing nutrient upwelling from increased water column stratification have created modern silica-poor surface waters. Here, radiolarian silicification decreases significantly (r = 0.91, P < 0.001), from approximately 0.18 (shell volume fraction) in the basal Cenozoic to modern values of approximately 0.06. A third of the total change occurred rapidly at 35 Ma, in correlation to major increases in water column stratification and abundance of diatoms. In high southern latitudes, Southern Ocean circulation, present since the late Eocene, maintains significant surface water silica availability. Here, radiolarian silicification decreased insignificantly (r = 0.58, P = 0.1), from approximately 0.13 at 35 Ma to 0.11 today. Trends in shell size in both time series are statistically insignificant and are not correlated with each other. We conclude that there is no universal driver changing cell size in Cenozoic marine plankton. Furthermore, biologic and physical factors have, in concert, by reducing silica availability in surface waters, forced macroevolutionary changes in Cenozoic low-latitude radiolarians.

Ecology of the Opossum Shrimp (Neomysis mercedis) in a Lower Snake River Reservoir, Washington

USGS Publications Warehouse

Tiffan, Kenneth F.; Erhardt, John M.; Bickford, Brad

2017-01-01

The opossum shrimp Neomysis mercedis has expanded its range from the lower Columbia River upstream 695 kilometers into Lower Granite Reservoir where it is now very abundant. We studied Neomysis ecology in the reservoir during 2011–2015 to better understand the physical and biological factors that shape their distribution as well as their potential role in the food web. Benthic densities in offshore habitats ranged from 19 to 145 mysids m-2 in shallow (2–12 m) water and from 3 to 48 mysids m-2 in deep (> 12 m) water. Water velocity, depth, substrate, and seasonal interactions were important variables for explaining variation in Neomysis densities in offshore habitats. During spring, daytime densities in shoreline habitats (< 2 m deep) were variable, but nighttime densities generally decreased in summer following reproduction and as temperatures approached 23 °C. Neomysis were mainly collected from the water column during nighttime vertical tows in the downstream end of the reservoir when water velocities were low during summer and autumn. Reproduction occurred mainly in spring and early summer, but a second, smaller reproductive event was observed during autumn. The diet of Neomysis consisted primarily of detritus, rotifers, and copepods, but cladocerans were more prominent during summer and autumn. Physical factors like water velocity may have limited vertical migrations of Neomysis to feed in the water column and influenced use of different habitats in the reservoir. Neomysis are prey for a number of species, including juvenile salmon, but their relations are still largely unknown, and continued monitoring and research is warranted.

Ejecta from Ocean Impacts

NASA Technical Reports Server (NTRS)

Kyte, Frank T.

2003-01-01

Numerical simulations of deep-ocean impact provide some limits on the size of a projectile that will not mix with the ocean floor during a deep-ocean impact. For a vertical impact at asteroidal velocities (approx. 20 km/s), mixing is only likely when the projectile diameter is greater than 112 of the water depth. For oblique impacts, even larger projectiles will not mix with ocean floor silicates. Given the typical water depths of 4 to 5 km in deep-ocean basins, asteroidal projectiles with diameters as large as 2 or 3 km may commonly produce silicate ejecta that is composed only of meteoritic materials and seawater salts. However, the compressed water column beneath the projectile can still disrupt and shock metamorphose the ocean floor. Therefore, production of a separate, terrestrial ejecta component is not ruled out in the most extreme case. With increasing projectile size (or energy) relative to water depths, there must be a gradation between oceanic impacts and more conventional continental impacts. Given that 60% of the Earth's surface is covered by oceanic lithosphere and 500 m projectiles impact the Earth on 10(exp 5) y timescales, there must be hundreds of oceanic impact deposits in the sediment record awaiting discovery.

Mixing and phytoplankton dynamics in a submarine canyon in the West Antarctic Peninsula

NASA Astrophysics Data System (ADS)

Carvalho, Filipa; Kohut, Josh; Oliver, Matthew J.; Sherrell, Robert M.; Schofield, Oscar

2016-07-01

Bathymetric depressions (canyons) exist along the West Antarctic Peninsula shelf and have been linked with increased phytoplankton biomass and sustained penguin colonies. However, the physical mechanisms driving this enhanced biomass are not well understood. Using a Slocum glider data set with over 25,000 water column profiles, we evaluate the relationship between mixed layer depth (MLD, estimated using the depth of maximum buoyancy frequency) and phytoplankton vertical distribution. We use the glider deployments in the Palmer Deep region to examine seasonal and across canyon variability. Throughout the season, the ML becomes warmer and saltier, as a result of vertical mixing and advection. Shallow ML and increased stratification due to sea ice melt are linked to higher chlorophyll concentrations. Deeper mixed layers, resulting from increased wind forcing, show decreased chlorophyll, suggesting the importance of light in regulating phytoplankton productivity. Spatial variations were found in the canyon head region where local physical water column properties were associated with different biological responses, reinforcing the importance of local canyon circulation in regulating phytoplankton distribution in the region. While the mechanism initially hypothesized to produce the observed increases in phytoplankton over the canyons was the intrusion of warm, nutrient enriched modified Upper Circumpolar Deep Water (mUCDW), our analysis suggests that ML dynamics are key to increased primary production over submarine canyons in the WAP.

The role of Southern Ocean mixing and upwelling in glacial-interglacial atmospheric CO2 change

NASA Astrophysics Data System (ADS)

Watson, Andrew J.; Naveira Garabato, Alberto C.

2006-02-01

Decreased ventilation of the Southern Ocean in glacial time is implicated in most explanations of lower glacial atmospheric CO2. Today, the deep (>2000 m) ocean south of the Polar Front is rapidly ventilated from below, with the interaction of deep currents with topography driving high mixing rates well up into the water column. We show from a buoyancy budget that mixing rates are high in all the deep waters of the Southern Ocean. Between the surface and ~2000 m depth, water is upwelled by a residual meridional overturning that is directly linked to buoyancy fluxes through the ocean surface. Combined with the rapid deep mixing, this upwelling serves to return deep water to the surface on a short time scale. We propose two new mechanisms by which, in glacial time, the deep Southern Ocean may have been more isolated from the surface. Firstly, the deep ocean appears to have been more stratified because of denser bottom water resulting from intense sea ice formation near Antarctica. The greater stratification would have slowed the deep mixing. Secondly, subzero atmospheric temperatures may have meant that the present-day buoyancy flux from the atmosphere to the ocean surface was reduced or reversed. This in turn would have reduced or eliminated the upwelling (contrary to a common assumption, upwelling is not solely a function of the wind stress but is coupled to the air-sea buoyancy flux too). The observed very close link between Antarctic temperatures and atmospheric CO2 could then be explained as a natural consequence of the connection between the air-sea buoyancy flux and upwelling in the Southern Ocean, if slower ventilation of the Southern Ocean led to lower atmospheric CO2. Here we use a box model, similar to those of previous authors, to show that weaker mixing and reduced upwelling in the Southern Ocean can explain the low glacial atmospheric CO2 in such a formulation.

Coral communities as indicators of ecosystem-level impacts of the Deepwater Horizon spill

USGS Publications Warehouse

Fisher, Charles R.; Demopoulos, Amanda W.J.; Cordes, Erik E.; Baums, Iliana B.; White, Helen K.; Bourque, Jill R.

2014-01-01

The Macondo oil spill released massive quantities of oil and gas from a depth of 1500 meters. Although a buoyant plume carried released hydrocarbons to the sea surface, as much as half stayed in the water column and much of that in the deep sea. After the hydrocarbons reached the surface, weathering processes, burning, and the use of a dispersant caused hydrocarbon-rich marine snow to sink into the deep sea. As a result, this spill had a greater potential to affect deep-sea communities than had any previous spill. Here, we review the literature on impacts on deep-sea communities from the Macondo blowout and provide additional data on sediment hydrocarbon loads and the impacts on sediment infauna in areas with coral communities around the Macondo well. We review the literature on the genetic connectivity of deep-sea species in the Gulf of Mexico and discuss the potential for wider effects on deep Gulf coral communities.

Ventilation of the deep Southern Ocean and changes in atmospheric CO2 during the last deglacial and glacial periods

NASA Astrophysics Data System (ADS)

Gottschalk, J.; Skinner, L. C.; Lippold, J. A.; Jaccard, S.; Vogel, H.; Frank, N.; Waelbroeck, C.

2014-12-01

The Southern Ocean is thought to have played a key role in atmospheric CO2 (CO2,atm) variations, both via its role in bringing carbon-rich deep-waters into contact with the atmosphere, and via its capacity for enhanced biologically mediated carbon export into the deep sea. The governing mechanisms of millennial scale rises in CO2,atm during the last deglacial and glacial periods have been linked controversially either with variations in biological export productivity, possibly driven by fluctuations in airborne dust supply, or to variations in southern high-latitude vertical mixing, possibly driven by changes in westerly wind stress or density stratification across the Southern Ocean water column. However, the impact of these processes on deep, southern high-latitude carbon sequestration and ocean-atmosphere CO2 exchange remain ambiguous. We present proxy evidence for the link between deep carbon storage in the sub-Antarctic Atlantic with changes in CO2,atm during the last 70 ka from sub-millennially resolved changes in bottom water oxygenation based on the uranium accumulation in authigenic coatings on foraminiferal shells and the δ13C offset between epibenthic and infaunal foraminifera (Δδ13C). We compare our results with reconstructed opal fluxes and sediment model output data to assess the impact of physical and biological processes on Southern Ocean carbon storage. While variations in sub-Antarctic Atlantic export production are intrinsically linked with changes in airborne dust supply supporting the major impact of dust on the biological soft-tissue pump, they cannot account for observed changes in pore water organic carbon respiration indicated by increasing Δδ13C and therefore, bottom water oxygen changes in the deep sub-Antarctic Atlantic. This is in strong support of millennial-scale fluctuations in deep Southern Ocean carbon storage primarily controlled by the ventilation of the deep ocean by southern-sourced water masses, which emphasize the strong control of vertical mixing and upwelling of CO2-rich water masses in the Southern Ocean on the ocean-atmosphere exchange of CO2 and variation in CO2,atm over both glacial-interglacial and millennial time scales.

A Conceptual Model for Tropical Cyclone Formation

NASA Astrophysics Data System (ADS)

Wang, Z.

2014-12-01

The role of cumulus congestus (shallow and congestus convection) in tropical cyclone (TC) formation is examined in a high-resolution simulation of Tropical Cyclone Fay (2008). It is found that cumulus congestus plays a dominant role in moistening the lower to middle troposphere and spinning up the near-surface circulation before genesis, while deep convection plays a key role in moistening the upper troposphere and intensifying the cyclonic circulation over a deep layer. The transition from the tropical wave stage to the TC stage is marked by a substantial increase in net condensation and potential vorticity generation by deep convection in the inner wave pouch region. This study suggests that TC formation can be regarded as a two-stage process. The first stage is a gradual process of moisture preconditioning and the low-level spinup, in which cumulus congestus plays a dominant role. The second stage commences with the rapid development of deep convection in the inner pouch region after the air column is moistened sufficiently, whereupon the concentrated convective heating near the pouch center strengthens the transverse circulation and leads to the amplification of the cyclonic circulation over a deep layer. The rapid development of deep convection can be explained by the power-law increase of precipitation rate with column water vapor (CWV) above a critical value. The high CWV near the pouch center thus plays an important role in convective organization. It is also shown that cumulus congestus can effectively drive the low-level convergence and provides a direct and simple pathway for the development of the TC proto-vortex near the surface.

Nutrient Fluxes From Profundal Sediment of Ultra-Oligotrophic Lake Tahoe, California/Nevada: Implications for Water Quality and Management in a Changing Climate

NASA Astrophysics Data System (ADS)

Beutel, Marc W.; Horne, Alexander J.

2018-03-01

A warming climate is expected to lead to stronger thermal stratification, less frequent deep mixing, and greater potential for bottom water anoxia in deep, temperate oligotrophic lakes. As a result, there is growing interest in understanding nutrient cycling at the profundal sediment-water interface of these rare ecosystems. This paper assessed nutrient content and nutrient flux rates from profundal sediment at Lake Tahoe, California/Nevada, USA. Sediment is a large reservoir of nutrients, with the upper 5 cm containing reduced nitrogen (˜6,300 metric tons) and redox-sensitive phosphorus (˜710 metric tons) equivalent to ˜15 times the annual external load. Experimental results indicate that if deep water in Lake Tahoe goes anoxic, profundal sediment will release appreciable amounts of phosphate (0.13-0.29 mg P/m2·d), ammonia (0.49 mg N/m2·d), and iron to overlaying water. Assuming a 10 year duration of bottom water anoxia followed by a deep-water mixing event, water column phosphate, and ammonia concentrations would increase by an estimated 1.6 µg P/L and 2.9 µg N/L, nearly doubling ambient concentrations. Based on historic nutrient enrichment assays this could lead to a ˜40% increase in algal growth. Iron release could have the dual effect of alleviating nitrate limitation on algal growth while promoting the formation of fine iron oxyhydroxide particles that degrade water clarity. If the depth and frequency of lake mixing decrease in the future as hydrodynamic models suggest, large-scale in-lake management strategies that impede internal nutrient loading in Lake Tahoe, such as bottom water oxygen addition or aluminum salt addition, may need to be considered.

Rapid Response of Eastern Mediterranean Deep Sea Microbial Communities to Oil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Jiang; Techtmann, Stephen M.; Woo, Hannah L.

Deep marine oil spills like the Deepwater Horizon (DWH) in the Gulf of Mexico have the potential to drastically impact marine systems. Crude oil contamination in marine systems remains a concern, especially for countries around the Mediterranean Sea with off shore oil production. The goal of this study was to investigate the response of indigenous microbial communities to crude oil in the deep Eastern Mediterranean Sea (E. Med.) water column and to minimize potential bias associated with storage and shifts in microbial community structure from sample storage. 16S rRNA amplicon sequencing was combined with GeoChip metagenomic analysis to monitor themore » microbial community changes to the crude oil and dispersant in on-ship microcosms set up immediately after water collection. After 3 days of incubation at 14 °C, the microbial communities from two different water depths: 824 m and 1210 m became dominated by well-known oil degrading bacteria. The archaeal population and the overall microbial community diversity drastically decreased. Similarly, GeoChip metagenomic analysis revealed a tremendous enrichment of genes related to oil biodegradation, which was consistent with the results from the DWH oil spill. These results highlight a rapid microbial adaption to oil contamination in the deep E. Med., and indicate strong oil biodegradation potentia« less

The water masses and volumetry of the southern Agulhas Current region

NASA Astrophysics Data System (ADS)

Valentine, H. R.; Lutjeharms, J. R. E.; Brundrit, G. B.

1993-06-01

It has been suggested that the southern termination of the Agulhas Current plays a crucial role in the global circulation of thermocline water and thus in global climate. Due to a lack of modern hydrographic observations in this region, no detailed description of water masses or a fine-scale volumetric census for this geographic area had been carried out. Such an analysis of a collection of recent high-quality hydrographic measurements shows that the warm, saline, surface water of Agulhas Current origin contributes very little to the overall volume of the upper 1500 m of the water column in the area. Occasional equatorward leakages from south of the Subtropical Convergence are represented by a range of low-salinity outliers, but they represent <1% of the total volume. The distribution of water volume in temperature/salinity space for the Agulhas Retroflection is less diverse that that of the world ocean as a whole, 25% of the total volume of the region being contained in only 21 fine-scale temperature/salinity classes. North Atlantic Deep Water is the dominant water mass, accounting for 40% of the total volume. Deep Water in general accounts for 60% of the total volume.

Neodymium and carbon isotopic fingerprints of warm Pliocene circulation throughout the deep Atlantic

NASA Astrophysics Data System (ADS)

Riesselman, C. R.; Scher, H. D.; Dowsett, H. J.; Robinson, M. M.

2013-12-01

The mid-Piacenzian age of the Pliocene is the most recent interval in Earth's history to sustain global warmth within the range predicted for the 21st century. To understand this interval, the USGS PRISM Project has developed a reconstruction of global conditions at 3.264-3.025 Ma, which includes a significant North Atlantic warm SST anomaly coupled with increased evaporation. Warm anomalies are also detected in the deep ocean as far as 46°S, suggesting that enhanced meridional overturning circulation may have been responsible for more southerly penetration of North Atlantic Deep Water (NADW). However, deep temperature proxies are not diagnostic of water mass, and some coupled model simulations predict transient decreases in NADW production in the 21st century, presenting a contrasting picture of future climate. We present a new multi-proxy synthesis of Atlantic deep ocean circulation during the PRISM interval, using the neodymium isotopic composition (ɛNd) of fossil fish teeth as a proxy for water mass source and the δ13C of benthic foraminifera as a proxy for water mass age. This reconstruction utilizes both new and previously published data from 11 DSDP and ODP sites in the North Atlantic (Site 610) and along depth transects from equatorial Ceara Rise, southern mid-latitude Walvis Ridge, and south Atlantic Meteor Rise/Agulhas Ridge. Published data from ferromanganese crusts constrain Pliocene Antarctic deep waters at ~ ɛNd = -8, distinct from the less radiogenic ɛNd = -11.5 that characterizes Pliocene northern component water (NCW). These values fingerprint northern and southern sources throughout the Atlantic basin. Pliocene fish teeth from Site 610 (2400 m water depth) and from four Ceara Rise sites (3000-4300 m) preserve distinctly North Atlantic ɛNd. When averaged across the PRISM interval, mean values for these five sites range from ɛNd = -10.97 to -10.25, and the Pliocene depth transect closely mirrors the structure of the modern column, indicating that Ceara Rise was dominantly influenced by NCW at all depths. In contrast, Walvis Ridge water column structure was significantly different in the Pliocene. Today, a core of NADW between 1800 and 3500 m overlies abyssal southern component water (SCW). During the Pliocene, however, sites at 4000 and 4700 m were influenced exclusively by NCW, with PRISM mean ɛNd of -11.14 and -11.45. In contrast, mean ɛNd = -9.86 indicates that the shallowest site (2500 m), which sits in the core of NADW today, was instead influenced by SCW throughout the PRISM interval. The Meteor Rise/Agulhas Ridge transect provides further evidence for south Atlantic restructuring in the warm Pliocene. At the deepest Agulhas Ridge site (3700 m), PRISM mean ɛNd = -8.47, an unequivocally SCW signature. Today, the shallower Meteor Rise sites (2000 and 2500 m) are within NADW, yet mean PRISM ɛNd = -7.68 and -7.82 - more radiogenic than the SCW end member - raising the possibility that south Atlantic intermediate waters incorporated both Pacific and Antarctic components in the Pliocene.

CORRIGENDUM of the MJO Transition from Shallow to Deep Convection in Cloudsat-Calipso Data and GISS GCM Simulations

NASA Technical Reports Server (NTRS)

Del Genio, Anthony; Chen, Yonghua; Kim, Daehyun; Yao, Mao-Sung

2015-01-01

We have identified several errors in the calculations that were performed to create Fig. 3 of Del Genio et al. (2012). These errors affect the composite evolution of precipitation and column water vapor versus lag relative to the Madden-Julian oscillation (MJO) peak presented in that figure. The precipitation and column water vapor data for the April and November 2009 MJO events were composited incorrectly because the date of the MJO peak at a given longitude was assigned to the incorrect longitude band. In addition, the precipitation data for all MJO events were first accumulated daily and the daily accumulations averaged at each lag to create the composite, rather than the averaging of instantaneous values that was used for other composite figures in the paper. One poorly sampled day in the west Pacific therefore biases the composite precipitation in that region at several lags after the MJO peak. Finally, a 4-day running mean was mistakenly applied to the precipitation and column water vapor data rather than the intended 5-day running mean. The results of the corrections are that an anomalous west Pacific precipitation maximum510 days after the MJO peak is removed and the maximum in west Pacific precipitation one pentad before the MJO peak is now more evident; there is now a clear maximum in precipitation for the entire warm pool one pentad before the MJO peak; west Pacific column water vapor now varies more strongly as a function of lag relative to the peak; and precipitation, and to a lesser extent column water vapor, in general vary more smoothly with time. The corrections do not affect any other parts of the paper nor do they change the scientific conclusions we reached. The 4-day running mean error also affects Figs. 1 and 2 therein, with almost imperceptible impacts that do not affect any results or necessitate major changes to the text.

Fate of copper complexes in hydrothermally altered deep-sea sediments from the Central Indian Ocean Basin.

PubMed

Chakraborty, Parthasarathi; Sander, Sylvia G; Jayachandran, Saranya; Nath, B Nagender; Nagaraju, G; Chennuri, Kartheek; Vudamala, Krushna; Lathika, N; Mascarenhas-Pereira, Maria Brenda L

2014-11-01

The current study aims to understand the speciation and fate of Cu complexes in hydrothermally altered sediments from the Central Indian Ocean Basin and assess the probable impacts of deep-sea mining on speciation of Cu complexes and assess the Cu flux from this sediment to the water column in this area. This study suggests that most of the Cu was strongly associated with different binding sites in Fe-oxide phases of the hydrothermally altered sediments with stabilities higher than that of Cu-EDTA complexes. The speciation of Cu indicates that hydrothermally influenced deep-sea sediments from Central Indian Ocean Basin may not significantly contribute to the global Cu flux. However, increasing lability of Cu-sediment complexes with increasing depth of sediment may increase bioavailability and Cu flux to the global ocean during deep-sea mining. Copyright © 2014 Elsevier Ltd. All rights reserved.

Initial Results on the Extraterrestrial Component of New Sediment Cores Containing Deposits of the Eltanin Impact Event

NASA Technical Reports Server (NTRS)

Kyte, Frank T.; Gersonde, Rainer

2003-01-01

Background The impact of the Eltanin asteroid into the Bellingshausen Sea (2.15 Ma) is the only known impact in a deep-ocean (approx. 5 km) basin. In 1995, Polarstern expedition ANT XII/4 made the first geological survey of the suspected impact region. Three sediment cores sampled around the San Martin seamounts (approx. 57.5 S, 91 W) contained well-preserved impact deposits. Sediments of Eocene age and younger were ripped up and redeposited by the impact. The depositional sequence produced by the impact has three units: a chaotic assemblage of sediment fragments up to 50 cm, followed by laminated sands deposited as a turbulent flow, and finally silts and clays that accumulated from dispersed sediments in the water column. The meteoritic impact ejecta, which is composed of shock-melted asteroidal materials and unmelted meteorites, settled through the water column and concentrated near the top of the laminated sands.

Observation of Mountain Lee Waves with MODIS NIR Column Water Vapor

NASA Technical Reports Server (NTRS)

Lyapustin, A.; Alexander, M. J.; Ott, L.; Molod, A.; Holben, B.; Susskind, J.; Wang, Y.

2014-01-01

Mountain lee waves have been previously observed in data from the Moderate Resolution Imaging Spectroradiometer (MODIS) "water vapor" 6.7 micrometers channel which has a typical peak sensitivity at 550 hPa in the free troposphere. This paper reports the first observation of mountain waves generated by the Appalachian Mountains in the MODIS total column water vapor (CWV) product derived from near-infrared (NIR) (0.94 micrometers) measurements, which indicate perturbations very close to the surface. The CWV waves are usually observed during spring and late fall or some summer days with low to moderate CWV (below is approx. 2 cm). The observed lee waves display wavelengths from3-4 to 15kmwith an amplitude of variation often comparable to is approx. 50-70% of the total CWV. Since the bulk of atmospheric water vapor is confined to the boundary layer, this indicates that the impact of thesewaves extends deep into the boundary layer, and these may be the lowest level signatures of mountain lee waves presently detected by remote sensing over the land.

Bottom Interaction in Long Range Acoustic Propagation

DTIC Science & Technology

2006-09-30

Pacific Ocean utilizing controlled sources and vertical and horizontal receiver arrays . Broadband sources are considered with typical center...The LOAPEX (Long-range Ocean Acoustic Propagation Experiment) vertical line arrays (VLA) are described on page 1 of the LOAPEX cruise report: " The...hydrophone arrays on the two combined VLAs covered most of the 5-km water column. We refer to one of the VLAs as the deep VLA (DVLA), located at

Microbiota within the perennial ice cover of Lake Vida, Antarctica.

PubMed

Mosier, Annika C; Murray, Alison E; Fritsen, Christian H

2007-02-01

Lake Vida, located in the McMurdo Dry Valleys, Antarctica, is an 'ice-sealed' lake with approximately 19 m of ice covering a highly saline water column (approximately 245 ppt). The lower portions of the ice cover and the lake beneath have been isolated from the atmosphere and land for circa 2800 years. Analysis of microbial assemblages within the perennial ice cover of the lake revealed a diverse array of bacteria and eukarya. Bacterial and eukaryal denaturing gradient gel electrophoresis phylotype profile similarities were low (<59%) between all of the depths compared (five depths spanning 11 m of the ice cover), with the greatest differences occurring between surface and deep ice. The majority of bacterial 16S rRNA gene sequences in the surface ice were related to Actinobacteria (42%) while Gammaproteobacteria (52%) dominated the deep ice community. Comparisons of assemblage composition suggest differences in ice habitability and organismal origin in the upper and lower portions of ice cover. Specifically, the upper ice cover microbiota likely reflect the modern day transport and colonization of biota from the terrestrial landscape, whereas assemblages in the deeper ice are more likely to be persistent remnant biota that originated from the ancient liquid water column of the lake that froze.

Cadmium cycling in the water column of the Kuroshio-Oyashio Extension region: Insights from dissolved and particulate isotopic composition

NASA Astrophysics Data System (ADS)

Yang, Shun-Chung; Zhang, Jing; Sohrin, Yoshiki; Ho, Tung-Yuan

2018-07-01

We measured dissolved and particulate Cd isotopic composition in the water column of a meridional transect across the Kuroshio-Oyashio Extension region in a Japanese GEOTRACES cruise to investigate the relative influence of physical and biogeochemical processes on Cd cycling in the Northwestern Pacific Ocean. Located at 30-50°N along 165°E, the transect across the extension region possesses dramatic hydrographic contrast. Cold surface water and a relatively narrow and shallow thermocline characterizes the Oyashio Extension region in contrast to a relatively warm and highly stratified surface water and thermocline in the Kuroshio Extension region. The contrasting hydrographic distinction at the study site provides us with an ideal platform to investigate the spatial variations of Cd isotope fractionation systems in the ocean. Particulate samples demonstrated biologically preferential uptake of light Cd isotopes, and the fractionation effect varied dramatically in the surface water of the two regions, with relatively large fractionation factors in the Oyashio region. Based on the relationship of dissolved Cd concentrations and isotopic composition, we found that a closed system fractionation model can reasonably explain the relationship in the Kuroshio region. However, using dissolved Cd isotopic data, either a closed system or steady-state open system fractionation model may explain the relationship in the surface water of the Oyashio region. Particulate δ114/110Cd data further supports that the surface water of the Oyashio region matches a steady-state open system model more closely. Contrary to the surface water, the distribution of potential density exhibits comparable patterns with Cd elemental and isotopic composition in the thermocline and deep water in the two extension regions, showing that physical processes are the dominant forcing controlling Cd cycling in the deep waters. The results demonstrate that Cd isotope fractionation can match either a closed or open system Rayleigh fractionation model, depending on the relative contribution of physical and biogeochemical processes on its cycling.

Spatial variability of surface-sediment porewater pH and related water-column characteristics in deep waters of the northern South China Sea

NASA Astrophysics Data System (ADS)

Shao, Changgao; Sui, Yi; Tang, Danling; Legendre, Louis

2016-12-01

This study analyzes the pH of surface-sediment porewater (i.e. 2-3 cm below the water-sediment interface), and concentrations of CaCO3 and organic carbon (OC) in 1192 sediment cores from the northern South China Sea, in water depths ranging from 137 to 3702 m. This is the first study in the literature to analyze the large-scale spatial variability of deep-water surface-sediment pH over a large ocean basin. The data showed strong spatial variations in pH. The lowest pH values (<7.3) were observed south of Hainan Island, an area that is affected by summer upwelling and freshwater runoff from the Pearl and Red Rivers. Moderately low pH values (generally 7.3-7.5) occurred in two other areas: a submarine canyon, where sediments originated partly from the Pearl River and correspond to a paleo-delta front during the last glacial period; and southwest of Taiwan Island, where waters are affected by the northern branch of the Kuroshio intrusion current (KIC) and runoff from Taiwan rivers. The surface sediments with the highest pH (⩾7.5, and up to 8.3) were located in a fourth area, which corresponded to the western branch of the KIC where sediments have been intensively eroded by bottom currents. The pH of surface-sediment porewater was significantly linearly related to water depth, bottom-water temperature, and CaCO3 concentration (p < 0.05 for the whole sampling area). This study shows that the pH of surface-sediment porewater can be sensitive to characteristics of the overlying water column, and suggests that it will respond to global warming as changes in surface-ocean temperature and pH progressively reach deeper waters.

A Coupled Epipelagic-Meso/Bathypelagic Particle Flux Model for the Bermuda Atlantic Time-series Station (BATS)/Oceanic Flux Program (OFP) Site

NASA Astrophysics Data System (ADS)

Glover, D. M.; Conte, M.

2002-12-01

Of considerable scientific interest is the role remineralization plays in the global carbon cycle. It is the ``biological pump'' that fixes carbon in the upper water column and exports it for long time periods to the deep ocean. From a global carbon cycle point-of-view, it is the processes that govern remineralization in the mid- to deep-ocean waters that provide the feedback to the biogeochemical carbon cycle. In this study we construct an ecosystem model that serves as a mechanistic link between euphotic processes and mesopelagic and bathypelagic processes. We then use this prognostic model to further our understanding of the unparalleled time-series of deep-water sediment traps (21+ years) at the Oceanic Flux Program (OFP) and the euphotic zone measurements (10+ years) at the Bermuda Atlantic Time-series Site (BATS). At the core of this mechanistic ecosystem model of the mesopelagic zone is a model that consists of an active feeding habit zooplankton, a passive feeding habit zooplankton, large detritus (sinks), small detritus (non-sinking), and a nutrient pool. As the detritus, the primary source of food, moves through the water column it is fed upon by the active/passive zooplankton pair and undergoes bacterially mediated remineralization into nutrients. The large detritus pool at depth gains material from the formation of fecal pellets from the passive and active zooplankton. Sloppy feeding habits of the active zooplankton contribute to the small detrital pool. Zooplankton mortality (both classes) also contribute directly to the large detritus pool. Aggregation and disaggregation transform detrital particles from one pool to the other and back again. The nutrients at each depth will gain from detrital remineralization and zooplankton excretion. The equations that model the active zooplankton, passive zooplankton, large detritus, small detritus, and nutrients will be reviewed, results shown and future model modifications discussed.

Prokaryotic degradation of high molecular weight dissolved organic matter in the deep-sea waters of NW Mediterranean Sea under in situ temperature and pressure conditions during contrasted hydrological conditions

NASA Astrophysics Data System (ADS)

Tamburini, C.; Boutrif, M.; Garel, M.; Sempéré, R.; Repeta, D.; Charriere, B.; Nerini, D.; Panagiotopoulos, C.

2016-02-01

The contribution of the semi-labile dissolved organic carbon (DOC) to the global prokaryotic production has been assessed in very few previous studies. Some experiments show rapid utilization of semi-reactive DOC by prokaryotes, while other experiments show almost no utilization at all. However, all these studies did not take into account the role of hydrostatic pressure for the degradation of organic matter. In this study, we investigate (1) the degradation of "natural" high molecular weight DOM HMW-DOM (obtained after ultrafiltration) and (2) the uptake of labeled extracellular polymeric substances (3H-EPS) incubated with deep-sea water samples (2000 m-depth, NW Mediterranean Sea) under in situ pressure conditions (HP) and under atmospheric compression after decompression of the deep samples (ATM) during stratified and mixed water conditions (deep sea convection). Our results indicated that during HP incubations DOC exhibited the highest degradation rates (kHP DOC = 0.82 d-1) compared to the ATM conditions were no or few degradation was observed (kATM DOC= 0.007 d-1). An opposite trend was observed for the HP incubations from mixed deep water masses. HP incubation measurements displayed the lowest DOC degradation (kHP DOC=0.031 d-1) compared to the ATM conditions (kATM DOC=0.62 d-1). These results imply the presence of allochthonous prokaryotic cells in deep-sea samples after a winter water mass convection. Same trends were found using 3H-EPS uptake rates which were higher at HP than at ATM conditions during stratified period conditions whereas the opposite patterns were observed during deep-sea convection event. Moreover, we found than Euryarchaea were the main contributors to 3H-EPS assimilation at 2000m-depth, representing 58% of the total cells actively assimilating 3H-EPS. This study demonstrates that remineralization rates of semi-labile DOC in deep NW Med. Sea are controlled by the prokaryotic communities, which are influenced by the hydrological conditions of the water column.

Biogeochemical processes controlling density stratification in an iron-meromictic lake

NASA Astrophysics Data System (ADS)

Nixdorf, E.; Boehrer, B.

2015-06-01

Biogeochemical processes and mixing regime of a lake can control each other mutually. The prominent case of iron meromixis is investigated in Waldsee near Doebern, a small lake that originated from surface mining of lignite. From a four years data set of monthly measured electrical conductivity profiles, we calculated summed conductivity as a quantitative variable reflecting the amount of electro-active substances in the entire lake. Seasonal variations followed changing chemocline height. Coinciding changes of electrical conductivities in the monimolimnion indicated that a considerable share of substances, precipitated by the advancing oxygenated epilimnion, re-dissolved in the remaining anoxic deep waters and contributed considerably to the density stratification. In addition, we constructed a lab experiment, in which aeration of monimolimnetic waters removed iron compounds and organic material. Precipitates could be identified by visual inspection. Introduced air bubbles ascended through the water column and formed a water mass similar to the mixolimnetic Waldsee water. The remaining less dense water remained floating on the nearly unchanged monimolimnetic water. In conclusion, iron meromixis as seen in Waldsee did not require two different sources of incoming waters, but the inflow of iron rich deep groundwater and the aeration through the lake surface were fully sufficient.

Tropical Convective Transition Statistics and Causality in the Water Vapor–Precipitation Relation

DOE PAGES

Kuo, Yi-Hung; Neelin, J. David; Mechoso, C. Roberto

2017-03-09

Previous work by various authors has pointed to the role of lower-free-tropospheric humidity in affecting the onset of deep convection in the tropics. Empirical relationships between column water vapor (CWV) and precipitation have been inferred to result from these effects. Evidence from previous work has included deep convective conditional instability calculations for entraining plumes, in which the lower-free-tropospheric environment affects the onset of deep convection due to the differential impact on buoyancy of turbulent entrainment of dry versus moist air. The relationship between deep convection and water vapor is, however, a two-way interaction because convection also moistens the free troposphere.more » The present study adds an additional line of evidence toward fully establishing the causality of the precipitation–water vapor relationship. Parameter perturbation experiments using the coupled Community Earth System Model (CESM) with high-time-resolution output are analyzed for a set of statistics for the transition to deep convection, coordinated with observational diagnostics for the Green Ocean Amazon (GOAmazon) campaign and tropical western Pacific Atmospheric Radiation Measurement (ARM) sites. For low values of entrainment in the deep convective scheme, these statistics are radically altered and the observed pickup of precipitation with CWV is no longer seen. In addition to helping cement the dominant direction of causality in the fast-time-scale precipitation–CWV relationship, the results point to impacts of entrainment on the climatology. Because at low entrainment convection can fire before tropospheric moistening, the climatological values of relative humidity are lower than observed. These findings can be consequential to biases in simulated climate and to projections of climate change.« less

Tropical Convective Transition Statistics and Causality in the Water Vapor–Precipitation Relation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kuo, Yi-Hung; Neelin, J. David; Mechoso, C. Roberto

Previous work by various authors has pointed to the role of lower-free-tropospheric humidity in affecting the onset of deep convection in the tropics. Empirical relationships between column water vapor (CWV) and precipitation have been inferred to result from these effects. Evidence from previous work has included deep convective conditional instability calculations for entraining plumes, in which the lower-free-tropospheric environment affects the onset of deep convection due to the differential impact on buoyancy of turbulent entrainment of dry versus moist air. The relationship between deep convection and water vapor is, however, a two-way interaction because convection also moistens the free troposphere.more » The present study adds an additional line of evidence toward fully establishing the causality of the precipitation–water vapor relationship. Parameter perturbation experiments using the coupled Community Earth System Model (CESM) with high-time-resolution output are analyzed for a set of statistics for the transition to deep convection, coordinated with observational diagnostics for the Green Ocean Amazon (GOAmazon) campaign and tropical western Pacific Atmospheric Radiation Measurement (ARM) sites. For low values of entrainment in the deep convective scheme, these statistics are radically altered and the observed pickup of precipitation with CWV is no longer seen. In addition to helping cement the dominant direction of causality in the fast-time-scale precipitation–CWV relationship, the results point to impacts of entrainment on the climatology. Because at low entrainment convection can fire before tropospheric moistening, the climatological values of relative humidity are lower than observed. These findings can be consequential to biases in simulated climate and to projections of climate change.« less

Flow path oscillations in transient ground-water simulations of large peatland systems

USGS Publications Warehouse

Reeve, A.S.; Evensen, R.; Glaser, P.H.; Siegel, D.I.; Rosenberry, D.

2006-01-01

Transient numerical simulations of the Glacial Lake Agassiz Peatland near the Red Lakes in Northern Minnesota were constructed to evaluate observed reversals in vertical ground-water flow. Seasonal weather changes were introduced to a ground-water flow model by varying evapotranspiration and recharge over time. Vertical hydraulic reversals, driven by changes in recharge and evapotranspiration were produced in the simulated peat layer. These simulations indicate that the high specific storage associated with the peat is an important control on hydraulic reversals. Seasonally driven vertical flow is on the order of centimeters in the deep peat, suggesting that seasonal vertical advective fluxes are not significant and that ground-water flow into the deep peat likely occurs on decadal or longer time scales. Particles tracked within the ground-water flow model oscillate over time, suggesting that seasonal flow reversals will enhance vertical mixing in the peat column. The amplitude of flow path oscillations increased with increasing peat storativity, with amplitudes of about 5 cm occurring when peat specific storativity was set to about 0.05 m-1. ?? 2005 Elsevier B.V. All rights reserved.

Radiolarians decreased silicification as an evolutionary response to reduced Cenozoic ocean silica availability

PubMed Central

Lazarus, David B.; Kotrc, Benjamin; Wulf, Gerwin; Schmidt, Daniela N.

2009-01-01

It has been hypothesized that increased water column stratification has been an abiotic “universal driver” affecting average cell size in Cenozoic marine plankton. Gradually decreasing Cenozoic radiolarian shell weight, by contrast, suggests that competition for dissolved silica, a shared nutrient, resulted in biologic coevolution between radiolaria and marine diatoms, which expanded dramatically in the Cenozoic. We present data on the 2 components of shell weight change—size and silicification—of Cenozoic radiolarians. In low latitudes, increasing Cenozoic export of silica to deep waters by diatoms and decreasing nutrient upwelling from increased water column stratification have created modern silica-poor surface waters. Here, radiolarian silicification decreases significantly (r = 0.91, P < 0.001), from ≈0.18 (shell volume fraction) in the basal Cenozoic to modern values of ≈0.06. A third of the total change occurred rapidly at 35 Ma, in correlation to major increases in water column stratification and abundance of diatoms. In high southern latitudes, Southern Ocean circulation, present since the late Eocene, maintains significant surface water silica availability. Here, radiolarian silicification decreased insignificantly (r = 0.58, P = 0.1), from ≈0.13 at 35 Ma to 0.11 today. Trends in shell size in both time series are statistically insignificant and are not correlated with each other. We conclude that there is no universal driver changing cell size in Cenozoic marine plankton. Furthermore, biologic and physical factors have, in concert, by reducing silica availability in surface waters, forced macroevolutionary changes in Cenozoic low-latitude radiolarians. PMID:19458255

The vertical structure of upper ocean variability at the Porcupine Abyssal Plain during 2012-2013

NASA Astrophysics Data System (ADS)

Damerell, Gillian M.; Heywood, Karen J.; Thompson, Andrew F.; Binetti, Umberto; Kaiser, Jan

2016-05-01

This study presents the characterization of variability in temperature, salinity and oxygen concentration, including the vertical structure of the variability, in the upper 1000 m of the ocean over a full year in the northeast Atlantic. Continuously profiling ocean gliders with vertical resolution between 0.5 and 1 m provide more information on temporal variability throughout the water column than time series from moorings with sensors at a limited number of fixed depths. The heat, salt and dissolved oxygen content are quantified at each depth. While the near surface heat content is consistent with the net surface heat flux, heat content of the deeper layers is driven by gyre-scale water mass changes. Below ˜150m, heat and salt content display intraseasonal variability which has not been resolved by previous studies. A mode-1 baroclinic internal tide is detected as a peak in the power spectra of water mass properties. The depth of minimum variability is at ˜415m for both temperature and salinity, but this is a depth of high variability for oxygen concentration. The deep variability is dominated by the intermittent appearance of Mediterranean Water, which shows evidence of filamentation. Susceptibility to salt fingering occurs throughout much of the water column for much of the year. Between about 700-900 m, the water column is susceptible to diffusive layering, particularly when Mediterranean Water is present. This unique ability to resolve both high vertical and temporal variability highlights the importance of intraseasonal variability in upper ocean heat and salt content, variations that may be aliased by traditional observing techniques.

A Methodology for Characterizing Potential Uranium Transport in Deep Geological Disposal Sites

NASA Astrophysics Data System (ADS)

Dittrich, T. M.; Reimus, P. W.

2013-12-01

In order to make safe and reasonable decisions about radioactive waste disposal in deep geologic sites, it is important to understand the fate and potential transport of long half-life transuranic radionuclides over a wide range of time and distance scales. The objective of this study was to evaluate and demonstrate new experimental methods for quantifying the potential for actinide transport in deep fractured crystalline rock formations. We selected a fractured/weathered granodiorite at the Grimsel Test Site (GTS) in Switzerland as a model system because field experiments involving uranium, as well as other actinides, have already been conducted. Working on this system provides a unique opportunity to compare lab experimental results with field-scale observations. Drilled rock cores and weathered fracture fill material (FFM) from the GTS were shipped to Los Alamos National Laboratory, characterized by x-ray diffraction and microscopy, and used in batch sorption/desorption and column breakthrough experiments. Uranium solutions were made by adding uranium to a synthetic Grimsel groundwater that matched the natural water chemistry found in the GTS groundwater. Batch and breakthrough experiments were conducted using solutions between pH 6.9 and 9.0. All column experiments were conducted using syringe pumps at low flow rate (<0.3 ml h-1) in small columns containing 5 g of material with pore volumes of 2-3 ml. These small columns allow rapid and economical evaluation of sorption/desorption behavior under flowing conditions (and in duplicate or triplicate). Solutions were switched to uranium-free synthetic Grimsel groundwater after equilibration in batch experiments or after near-steady uranium breakthrough occurred in column experiments. The measurement of uranium concentrations as a function of time under these conditions allowed interrogation of desorption rates which we believe control uranium fate and transport over long time and distance scales. Uranium transport was conservative and matched tritium breakthrough for pH 9.0; however, retardation increased when pH was reduced to 7.9 and 6.9. We are currently evaluating uranium adsorption/desorption rates as a function of water chemistry (initial focus on pH), with future testing planned to evaluate the influence of carbonate concentrations, flow rates, mineralogy, bentonite colloids and other actinides (e.g., Am). Figure 1. Uranium breakthrough results for (a) 6.5 μM U, (b) U-free solution, (c) flow rate increased from 0.3 to 0.6 mL h-1, (d) pH increased from 6.8 to 7.2, and (e) pH increased from 7.2 to 8.8.

Near-UV OH Prompt Emission in the Innermost Coma of 103P/Hartley 2

NASA Astrophysics Data System (ADS)

La Forgia, Fiorangela; Bodewits, Dennis; A'Hearn, Michael F.; Protopapa, Silvia; Kelley, Michael S. P.; Sunshine, Jessica; Feaga, Lori; Farnham, Tony

2017-11-01

The Deep Impact spacecraft flyby of comet 103P/Hartley 2 occurred on 2010 November 4, 1 week after perihelion with a closest approach (CA) distance of about 700 km. We used narrowband images obtained by the Medium Resolution Imager on board the spacecraft to study the gas and dust in the innermost coma. We derived an overall dust reddening of 15%/100 nm between 345 and 749 nm and identified a blue enhancement in the dust coma in the sunward direction within 5 km from the nucleus, which we interpret as a localized enrichment in water ice. OH column density maps show an anti-sunward enhancement throughout the encounter, except for the highest-resolution images, acquired at CA, where a radial jet becomes visible in the innermost coma, extending up to 12 km from the nucleus. The OH distribution in the inner coma is very different from that expected for a fragment species. Instead, it correlates well with the water vapor map derived by the HRI-IR instrument on board Deep Impact. Radial profiles of the OH column density and derived water production rates show an excess of OH emission during CA that cannot be explained with pure fluorescence. We attribute this excess to a prompt emission process where photodissociation of H2O directly produces excited OH*(A 2Σ+) radicals. Our observations provide the first direct imaging of near-UV prompt emission of OH. We therefore suggest the use of a dedicated filter centered at 318.8 nm to directly trace the water in the coma of comets.

Salinity stratification of the Mediterranean Sea during the Messinian crisis: A first model analysis

NASA Astrophysics Data System (ADS)

Simon, Dirk; Meijer, Paul Th.

2017-12-01

In the late Miocene, a thick and complex sequence of evaporites was deposited in the Mediterranean Sea during an interruption of normal marine sedimentation known as the Messinian Salinity Crisis. Because the related deposits are mostly hidden from scrutiny in the deep basin, correlation between onshore and offshore sediments is difficult, hampering the development of a comprehensive stratigraphic model. Since the various facies correspond to different salinities of the basin waters, it would help to have physics-based understanding of the spatial distribution of salt concentration. Here, we focus on modelling salinity as a function of depth, i.e., on the stratification of the water column. A box model is set up that includes a simple representation of a haline overturning circulation and of mixing. It is forced by Atlantic exchange and evaporative loss and is used to systematically explore the degree of stratification that results under a wide range of combinations of parameter values. The model demonstrates counterintuitive behaviour close to the saturation of halite. For parameter values that may well be realistic for the Messinian, we show that a significantly stratified Mediterranean water column can be established. In this case, Atlantic connectivity is limited but may be closer to modern magnitudes than previously thought. In addition, a slowing of Mediterranean overturning and a larger deep-water formation region (both in comparison to the present day) are required. Under these conditions, we would expect a longer duration of halite deposition than currently considered in the MSC stratigraphic consensus model.

Organization of the Tropical Convective Cloud Population by Humidity and the Critical Transition to Heavy Precipitation

NASA Astrophysics Data System (ADS)

Igel, M.

2015-12-01

The tropical atmosphere exhibits an abrupt statistical switch between non-raining and heavily raining states as column moisture increases across a wide range of length scales. Deep convection occurs at values of column humidity above the transition point and induces drying of moist columns. With a 1km resolution, large domain cloud resolving model run in RCE, what will be made clear here for the first time is how the entire tropical convective cloud population is affected by and feeds back to the pickup in heavy precipitation. Shallow convection can act to dry the low levels through weak precipitation or vertical redistribution of moisture, or to moisten toward a transition to deep convection. It is shown that not only can deep convection dehydrate the entire column, it can also dry just the lower layer through intense rain. In the latter case, deep stratiform cloud then forms to dry the upper layer through rain with anomalously high rates for its value of column humidity until both the total column moisture falls below the critical transition point and the upper levels are cloud free. Thus, all major tropical cloud types are shown to respond strongly to the same critical phase-transition point. This mutual response represents a potentially strong organizational mechanism for convection, and the frequency of and logical rules determining physical evolutions between these convective regimes will be discussed. The precise value of the point in total column moisture at which the transition to heavy precipitation occurs is shown to result from two independent thresholds in lower-layer and upper-layer integrated humidity.

The Dynamics of Vertical Migration in the Oceanic Gulf of Mexico after Deepwater Horizon: Active Linkage of Large Vertebrates and Deep-Pelagic Nekton

NASA Astrophysics Data System (ADS)

Sutton, T.; Cook, A.; Frank, T. M.; Boswell, K. M.; Vecchione, M.; Judkins, H.; Romero, I.

2016-02-01

Toothed whales, smaller cetaceans, seabirds, and epipelagic gamefishes rely on deep-pelagic (meso- and bathypelagic) nekton as primary or secondary prey. This trophic interaction is mediated by downward and upward vertical movements (e.g., sperm whale diving and lanternfishes migration, respectively). This interaction also links particle-feeding lower trophic levels with top predators in a manner that spans the gamut of depth domains. This is particularly important with respect to a whole-water column disturbance such as the Deepwater Horizon oil spill (DWHOS). Here we present highly resolved vertical distribution and migration data collected during a large-scale, NOAA-supported, deep-pelagic (0-1500 m) survey in 2011, along with data collected during ongoing GoMRI-supported DEEPEND consortium surveys. The deep-pelagic nekton community of the Gulf of Mexico is a complex mixture of migrating, non-migrating, and partially migrating assemblages that connect surface waters with depths in excess of 1000 m. Major patterns of vertical distribution for 400+ species of fishes, cephalopods, and macrocrustaceans, the primary prey of many important species of oceanic vertebrates living near-surface, will be summarized and quantified with the goal of highlighting potential vectors of anthropogenic contamination transfer in the deep-pelagial, the Gulf's largest ecosystem.

Don't Forget Kīlauea: Explosive Hazards at an Ocean Island Basaltic Volcano

NASA Astrophysics Data System (ADS)

Swanson, D. A.; Houghton, B. F.

2015-12-01

Kīlauea alternates between periods of high and low magma supply rate, each period lasting centuries. The low rate is only a few percent of the high rate. High supply rate, typified by the past 200 years, leads to frequent lava flows, elevated SO2 emission, and relatively low-hazard Hawaiian-style explosive activity (lava fountains, spattering). Periods of low magma supply are very different. They accompany formation and maintenance of a deep caldera, the floor of which is at or below the water table, and are characterized by phreatomagmatic and phreatic explosive eruptions largely powered by external water. The low magma supply rate results in few lava flows and reduced SO2 output. Studies of explosive deposits from the past two periods of low magma supply (~200 BCE-1000 CE and ~1500-1800 CE) indicate that VEIs calculated from isopach maps can range up to a low 3. Clast-size studies suggest that subplinian column heights can reach >10 km (most recently in 1790), though more frequent column heights are ~5-8 km. Pyroclastic density currents (PDCs) present severe proximal hazards; a PDC in 1790 killed a few hundred people in an area of Hawaíi Volcanoes National Park today visited by 5000 people daily. Ash in columns less than about 5 km a.s.l. is confined to the trade-wind regime and advects southwest. Ash in higher columns enters the jet stream and is transported east and southeast of the summit caldera. Recurrence of such column heights today would present aviation hazards, which, for an isolated state dependent on air transport, could have especially deleterious economic impact. There is currently no way to estimate when a period of low magma supply, a deep caldera, and powerful explosive activity will return. Hazard assessments must take into account the cyclic nature of Kīlauea's eruptive activity, not just its present status; consequently, assessments for periods of high and low magma supply rates should be made in parallel to cover all eventualities.

Responses of Water and Salt Parameters to Groundwater Levels for Soil Columns Planted with Tamarix chinensis

PubMed Central

Xia, Jiangbao; Zhao, Ximei; Chen, Yinping; Fang, Ying; Zhao, Ziguo

2016-01-01

Groundwater is the main water resource for plant growth and development in the saline soil of the Yellow River Delta in China. To investigate the variabilities and distributions of soil water and salt contents at various groundwater level (GL), soil columns with planting Tamarix chinensis Lour were established at six different GL. The results demonstrated the following: With increasing GL, the relative soil water content (RWC) declined significantly, whereas the salt content (SC) and absolute soil solution concentration (CS) decreased after the initial increase in the different soil profiles. A GL of 1.2 m was the turning point for variations in the soil water and salt contents, and it represented the highest GL that could maintain the soil surface moist within the soil columns. Both the SC and CS reached the maximum levels in these different soil profiles at a GL of 1.2 m. With the raise of soil depth, the RWC increased significantly, whereas the SC increased after an initial decrease. The mean SC values reached 0.96% in the top soil layer; however, the rates at which the CS and RWC decreased with the GL were significantly reduced. The RWC and SC presented the greatest variations at the medium (0.9–1.2 m) and shallow water levels (0.6 m) respectively, whereas the CS presented the greatest variation at the deep water level (1.5–1.8 m).The RWC, SC and CS in the soil columns were all closely related to the GL. However, the correlations among the parameters varied greatly within different soil profiles, and the most accurate predictions of the GL were derived from the RWC in the shallow soil layer or the SC in the top soil layer. A GL at 1.5–1.8 m was moderate for planting T. chinensis seedlings under saline groundwater conditions. PMID:26730602

Selenium and trace element mobility affected by periodic displacement of stratification in the Great Salt Lake, Utah

USGS Publications Warehouse

Beisner, K.; Naftz, D.L.; Johnson, W.P.; Diaz, X.

2009-01-01

The Great Salt Lake (GSL) is a unique ecosystem in which trace element activity cannot be characterized by standard geochemical parameters due to the high salinity. Movement of selenium and other trace elements present in the lake bed sediments of GSL may occur due to periodic stratification displacement events or lake bed exposure. The water column of GSL is complicated by the presence of a chemocline persistent over annual to decadal time scales. The water below the chemocline is referred to as the deep brine layer (DBL), has a high salinity (16.5 to 22.9%) and is anoxic. The upper brine layer (UBL) resides above the chemocline, has lower salinity (12.6 to 14.7%) and is oxic. Displacement of the DBL may involve trace element movement within the water column due to changes in redox potential. Evidence of stratification displacement in the water column has been observed at two fixed stations on the lake by monitoring vertical water temperature profiles with horizontal and vertical velocity profiles. Stratification displacement events occur over periods of 12 to 24 h and are associated with strong wind events that can produce seiches within the water column. In addition to displacement events, the DBL shrinks and expands in response to changes in the lake surface area over a period of months. Laboratory tests simulating the observed sediment re-suspension were conducted over daily, weekly and monthly time scales to understand the effect of placing anoxic bottom sediments in contact with oxic water, and the associated effect of trace element desorption and (or) dissolution. Results from the laboratory simulations indicate that a small percentage (1%) of selenium associated with anoxic bottom sediments is periodically solubilized into the UBL where it potentially can be incorporated into the biota utilizing the oxic part of GSL.

Organic-rich sediments in ventilated deep-sea environments: Relationship to climate, sea level, and trophic changes

NASA Astrophysics Data System (ADS)

Bertrand, P.; Pedersen, T. F.; Schneider, R.; Shimmield, G.; Lallier-Verges, E.; Disnar, J. R.; Massias, D.; Villanueva, J.; Tribovillard, N.; Huc, A. Y.; Giraud, X.; Pierre, C.; VéNec-Peyré, M.-T.

2003-02-01

Sediments on the Namibian Margin in the SE Atlantic between water depths of ˜1000 and ˜3600 m are highly enriched in hydrocarbon-prone organic matter. Such sedimentation has occurred for more than 2 million years and is geographically distributed over hundreds of kilometers along the margin, so that the sediments of this region contain a huge concentrated stock of organic carbon. It is shown here that most of the variability in organic content is due to relative dilution by buried carbonates. This reflects both export productivity and diagenetic dissolution, not differences in either water column or bottom water anoxia and related enhanced preservation of organic matter. These observations offer a new mechanism for the formation of potential source rocks in a well-ventilated open ocean, in this case the South Atlantic. The organic richness is discussed in terms of a suite of probable controls including local wind-driven productivity (upwelling), trophic conditions, transfer efficiency, diagenetic processes, and climate-related sea level and deep circulation. The probability of past occurrences of such organic-rich facies in equivalent oceanographic settings at the edge of large oceanic basins should be carefully considered in deep offshore exploration.

Impact of an intense water column mixing (0-1500 m) on prokaryotic diversity and activities during an open-ocean convection event in the NW Mediterranean Sea.

PubMed

Severin, Tatiana; Sauret, Caroline; Boutrif, Mehdi; Duhaut, Thomas; Kessouri, Fayçal; Oriol, Louise; Caparros, Jocelyne; Pujo-Pay, Mireille; Durrieu de Madron, Xavier; Garel, Marc; Tamburini, Christian; Conan, Pascal; Ghiglione, Jean-François

2016-12-01

Open-ocean convection is a fundamental process for thermohaline circulation and biogeochemical cycles that causes spectacular mixing of the water column. Here, we tested how much the depth-stratified prokaryotic communities were influenced by such an event, and also by the following re-stratification. The deep convection event (0-1500 m) that occurred in winter 2010-2011 in the NW Mediterranean Sea resulted in a homogenization of the prokaryotic communities over the entire convective cell, resulting in the predominance of typical surface Bacteria, such as Oceanospirillale and Flavobacteriales. Statistical analysis together with numerical simulation of vertical homogenization evidenced that physical turbulence only was not enough to explain the new distribution of the communities, but acted in synergy with other parameters such as exported particulate and dissolved organic matters. The convection also stimulated prokaryotic abundance (+21%) and heterotrophic production (+43%) over the 0-1500 m convective cell, and resulted in a decline of cell-specific extracellular enzymatic activities (-67%), thus suggesting an intensification of the labile organic matter turnover during the event. The rapid re-stratification of the prokaryotic diversity and activities in the intermediate layer 5 days after the intense mixing indicated a marked resilience of the communities, apart from the residual deep mixed water patch. © 2016 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

Cloud Microphysics Budget in the Tropical Deep Convective Regime

NASA Technical Reports Server (NTRS)

Li, Xiao-Fan; Sui, C.-H.; Lau, K.-M.; Einaudi, Franco (Technical Monitor)

2001-01-01

Cloud microphysics budgets in the tropical deep convective regime are analyzed based on a 2-D cloud resolving simulation. The model is forced by the large-scale vertical velocity and zonal wind and large-scale horizontal advections derived from TOGA COARE for a 20-day period. The role of cloud microphysics is first examined by analyzing mass-weighted mean heat budget and column-integrated moisture budget. Hourly budgets show that local changes of mass-weighted mean temperature and column-integrated moisture are mainly determined by the residuals between vertical thermal advection and latent heat of condensation and between vertical moisture advection and condensation respectively. Thus, atmospheric thermodynamics depends on how cloud microphysical processes are parameterized. Cloud microphysics budgets are then analyzed for raining conditions. For cloud-vapor exchange between cloud system and its embedded environment, rainfall and evaporation of raindrop are compensated by the condensation and deposition of supersaturated vapor. Inside the cloud system, the condensation of supersaturated vapor balances conversion from cloud water to raindrop, snow, and graupel through collection and accretion processes. The deposition of supersaturated vapor balances conversion from cloud ice to snow through conversion and riming processes. The conversion and riming of cloud ice and the accretion of cloud water balance conversion from snow to graupel through accretion process. Finally, the collection of cloud water and the melting of graupel increase raindrop to compensate the loss of raindrop due to rainfall and the evaporation of raindrop.

Effects of remediation amendments on vadose zone microorganisms

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Hannah M.; Tilton, Fred A.

2012-08-10

Surfactant-based foam delivery technology has been studied to remediate Hanford 200 area deep vadose zone sediment. However, the surfactants and remediation amendments have an unknown effect on indigenous subsurface microorganisms. Microbial populations are important factors to consider in remediation efforts due to their potential to alter soil geochemistry. This project focuses on measuring microbial metabolic responses to remediation amendments in batch and column studies using Deep Vadose Zone Sediments. Initial studies of the microbes from Hanford 200 area deep vadose zone sediment showed surfactants sodium dodecyl sulfate (SDS) and cocamidopropyl betaine (CAPB) and remediation amendment calcium polysulfide (CPS) had nomore » affect on microbial growth using BiologTM Ecoplates. To move towards a more realistic field analog, soil columns were packed with Hanford 200 Area sediment. Once microbial growth in the column was verified by observing growth of the effluent solution on tryptic soy agar plates, remedial surfactants were injected into the columns, and the resulting metabolic diversity was measured. Results suggest surfactant sodium dodecyl sulfate (SDS) stimulates microbial growth. The soil columns were also visualized using X-ray microtomography to inspect soil packing and possibly probe for evidence of biofilms. Overall, BiologTM Ecoplates provide a rapid assay to predict effects of remediation amendments on Hanford 200 area deep vadose zone microorganisms.« less

A method for simulating transient ground-water recharge in deep water-table settings in central Florida by using a simple water-balance/transfer-function model

USGS Publications Warehouse

O'Reilly, Andrew M.

2004-01-01

A relatively simple method is needed that provides estimates of transient ground-water recharge in deep water-table settings that can be incorporated into other hydrologic models. Deep water-table settings are areas where the water table is below the reach of plant roots and virtually all water that is not lost to surface runoff, evaporation at land surface, or evapotranspiration in the root zone eventually becomes ground-water recharge. Areas in central Florida with a deep water table generally are high recharge areas; consequently, simulation of recharge in these areas is of particular interest to water-resource managers. Yet the complexities of meteorological variations and unsaturated flow processes make it difficult to estimate short-term recharge rates, thereby confounding calibration and predictive use of transient hydrologic models. A simple water-balance/transfer-function (WBTF) model was developed for simulating transient ground-water recharge in deep water-table settings. The WBTF model represents a one-dimensional column from the top of the vegetative canopy to the water table and consists of two components: (1) a water-balance module that simulates the water storage capacity of the vegetative canopy and root zone; and (2) a transfer-function module that simulates the traveltime of water as it percolates from the bottom of the root zone to the water table. Data requirements include two time series for the period of interest?precipitation (or precipitation minus surface runoff, if surface runoff is not negligible) and evapotranspiration?and values for five parameters that represent water storage capacity or soil-drainage characteristics. A limiting assumption of the WBTF model is that the percolation of water below the root zone is a linear process. That is, percolating water is assumed to have the same traveltime characteristics, experiencing the same delay and attenuation, as it moves through the unsaturated zone. This assumption is more accurate if the moisture content, and consequently the unsaturated hydraulic conductivity, below the root zone does not vary substantially with time. Results of the WBTF model were compared to those of the U.S. Geological Survey variably saturated flow model, VS2DT, and to field-based estimates of recharge to demonstrate the applicability of the WBTF model for a range of conditions relevant to deep water-table settings in central Florida. The WBTF model reproduced independently obtained estimates of recharge reasonably well for different soil types and water-table depths.

Deep Sea Frontiers: Aid In Preparing a Book MS for Publication

DTIC Science & Technology

2001-09-30

about 200 m, are increasingly low levels of sunlight absorbed and scattered by the water column. As a result little or no photosynthetic...fish carcasses that reach the bottom from upper levels of the sea. To find this random, but crucial, manna, they must actively and effectively search...sea level , the thermodynamic p delta V element of the reaction kinetics is ignored because its contribution is nearly zero. But if metabolic

Decadal Comparisons of Particulate Matter in Repeat Transects in the Atlantic, Pacific, and Indian Ocean Basins

NASA Astrophysics Data System (ADS)

Gardner, W. D.; Mishonov, A. V.; Richardson, M. J.

2018-01-01

Basin-wide sections of beam cp (proxy for particle concentration) in ocean basins collected during numerous oceanographic programs over the last four decades record variable concentrations in euphotic surface waters, very low concentrations through most of the water column, and very low to very high concentrations near the seafloor. Sections resampled at decadal intervals show that intense benthic nepheloid layers (BNLs) recur in the same general locations in these repeat sections, most often where eddy kinetic energy (EKE: cm2 s-2) is high in overlying waters. Areas beneath regions of low surface EKE consistently have weak to no BNLs. The decadal persistence of the close connection between surface and benthic EKE and presence or absence of BNLs is clear. Understanding the location and causes of intense versus weak BNLs helps in assessing scavenging of adsorption-prone elements in the deep sea and quantifying the impact of deep ocean sediment dynamics on sediment redistribution.

A vertical wall in the Whittard Canyon with a novel community assemblage

NASA Astrophysics Data System (ADS)

Johnson, Mark; White, Martin; Wilson, Annette; Wuerzberg, Laura; Schwabe, Enrico; Folch, Helka; Allcock, Louise

2013-04-01

We describe a hitherto unreported community from a vertical wall in the Whittard Canyon system on the Atlantic Margin. The wall extended vertically for about 100 m from approximately 750 m depth. We explored the wall with an ROV and discovered an assemblage cominated by large limid bivalves Acesta excavata and deep-water oysters Neopycnodonte zibrowii at very high densities, particularly at overhangs. The assemblage also contained deep-water corals (including solitary corals). It had high numbers of flytrap anemones and had many mobile species associated with it including crustaceans such as Paramola cuvieri and Bathynectes longispina, echinoderms and fishes. We took CTD transects in the area of the wall and beam attenuation indicated nepheloid layers present in the water column. The greatest densities of suspended material at the ROV dive site were at the depth of the wall. We hypothesise that internal waves concentrate suspended sediment at the foot of the vertical wall. This may provide the resources to support the high density of large filter feeders at these depths.

Survival of the fittest: phosphorus burial in the sulfidic deep Black Sea

NASA Astrophysics Data System (ADS)

Kraal, Peter; Dijkstra, Nikki; Behrends, Thilo; Slomp, Caroline

2016-04-01

The Black Sea is characterized by permanently anoxic and sulfidic deep waters. Studies of the mechanisms of P burial in such a setting can be used to improve our understanding of P cycling in modern coastal systems undergoing eutrophication and ancient oceans during periods of anoxia in Earth's past. Here, we present phosphorus and iron (Fe) pools as determined in surface sediments along a transect from oxic shallow waters to sulfidic deep waters in the northwestern Black Sea, using a combination of bulk chemical analyses and micro-scale X-ray fluorescence (μXRF) and X-ray absorption spectroscopy (μXAS). We show that under oxic bottom water conditions, ferric iron oxides (Fe(III)ox) in surficial sediment efficiently scavenge dissolved phosphate from pore waters. Under these conditions, Fe(III)ox-bound P constitutes the main P pool at the sediment surface, but rapidly declines with depth in the sediment due to anoxic diagenesis. The transition from shallow (oxic) to deep (sulfidic) waters along the depth transect is reflected in a slight increase in the fraction of organic P. We also show evidence for authigenic calcium phosphate formation under sulfidic conditions at relatively low dissolved PO4 concentrations. Furthermore, we provide spectroscopic evidence for the presence of Fe(II)-Mn(II)-Mg-P minerals in sediments of the sulfidic deep basin. We hypothesize that these minerals are formed as a result of input of Fe(III)ox-P from shallower waters and subsequent transformation in either the water column or sediment. This finding suggests an unexpected strength of Fe-P shuttling from the shelf to the deep basin. While the presence of Fe-P species in such a highly sulfidic environment is remarkable, further analysis suggests that this P pool may not be quantitatively significant. In fact, our results indicate that some of the P that is interpreted as Fe-bound P based on chemical extraction may in fact be Ca-associated PO4 consisting of a combination of fish debris and adsorbed P.

Nitrogen and Phosphorus Budgets in the Northwestern Mediterranean Deep Convection Region

NASA Astrophysics Data System (ADS)

Kessouri, Faycal; Ulses, Caroline; Estournel, Claude; Marsaleix, Patrick; Severin, Tatiana; Pujo-Pay, Mireille; Caparros, Jocelyne; Raimbault, Patrick; Pasqueron de Fommervault, Orens; D'Ortenzio, Fabrizio; Taillandier, Vincent; Testor, Pierre; Conan, Pascal

2017-12-01

The aim of this study is to understand the biogeochemical cycles of the northwestern Mediterranean Sea (NW Med), where a recurrent spring bloom related to dense water formation occurs. We used a coupled physical-biogeochemical model at high resolution to simulate realistic 1 year period and analyze the nitrogen (N) and phosphorus (P) cycles. First, the model was evaluated using cruises carried out in winter, spring, and summer and a Bio-Argo float deployed in spring. Then, the annual cycle of meteorological and hydrodynamical forcing and nutrients stocks in the upper layer were analyzed. Third, the effect of biogeochemical and physical processes on N and P was quantified. Fourth, we quantified the effects of the physical and biological processes on the seasonal changes of the molar NO3:PO4 ratio, particularly high compared to the global ocean. The deep convection reduced the NO3:PO4 ratio of upper waters, but consumption by phytoplankton increased it. Finally, N and P budgets were estimated. At the annual scale, this area constituted a sink of inorganic and a source of organic N and P for the peripheral area. NO3 and PO4 were horizontally advected from the peripheral regions into the intermediate waters (130-800 m) of the deep convection area, while organic matter was exported throughout the whole water column toward the surrounding areas. The annual budget suggests that the NW Med deep convection constitutes a major source of nutrients for the photic zone of the Mediterranean Sea.

Polycyclic aromatic hydrocarbons (PAHs) in the water column and sediment core of Deep Bay, South China

NASA Astrophysics Data System (ADS)

Qiu, Yao-Wen; Zhang, Gan; Liu, Guo-Qing; Guo, Ling-Li; Li, Xiang-Dong; Wai, Onyx

2009-06-01

The levels of 15 polycyclic aromatic hydrocarbons (PAHs) were determined in seawater, suspended particulate matter (SPM), surface sediment and core sediment samples of Deep Bay, South China. The average concentrations Σ 15PAHs were 69.4 ± 24.7 ng l -1 in seawater, 429.1 ± 231.8 ng g -1 in SPM, and 353.8 ± 128.1 ng g -1 dry weight in surface sediment, respectively. Higher PAH concentrations were observed in SPM than in surface sediment. Temporal trend of PAH concentrations in core sediment generally increased from 1948 to 2004, with higher concentrations in top than in sub-surface, implying a stronger recent input of PAHs owing to the rapid economic development in Shenzhen. Compared with historical data, the PAH levels in surface sediment has increased, and this was further confirmed by the increasing trend of PAHs in the core sediment. Phenanthrene, fluoranthene and pyrene dominated in the PAH composition pattern profiles in the Bay. Compositional pattern analysis suggested that PAHs in the Deep Bay were derived from both pyrogenic and petrogenic sources, and diesel oil leakage, river runoff and air deposition may serve as important pathways for PAHs input to the Bay. Significant positive correlations between partition coefficient in surface sediment to that in water ( KOC) of PAH and their octanol/water partition coefficients ( KOW) were observed, suggesting that KOC of PAHs in sediment/water of Deep Bay may be predicted by the corresponding KOW.

Fracture zones in the Mid Atlantic Ridge lead to alterations in prokaryotic and viral parameters in deep-water masses

PubMed Central

Muck, Simone; Griessler, Thomas; Köstner, Nicole; Klimiuk, Adam; Winter, Christian; Herndl, Gerhard J.

2014-01-01

We hypothesized that mixing zones of deep-water masses act as ecotones leading to alterations in microbial diversity and activity due to changes in the biogeochemical characteristics of these boundary systems. We determined the changes in prokaryotic and viral abundance and production in the Vema Fracture Zone (VFZ) of the subtropical North Atlantic Ocean, where North Atlantic Deep Water (NADW) and Antarctic Bottom Water (AABW) are funneled through this narrow canyon and therefore, are subjected to intense vertical mixing. Consequently, salinity, potential temperature, oxygen, PO4, SiO4, NO3 were altered in the NADW inside the VFZ as compared to the NADW outside of the VFZ. Also, viral abundance, lytic viral production (VP) and the virus-to-prokaryote ratio (VPR) were elevated in the NADW in the VFZ as compared to the NADW outside the VFZ. In contrast to lytic VP, lysogenic VP and both the frequency of lytically (FIC) and lysogenically infected cells (FLC) did not significantly differ between in- and outside the VFZ. Generally, FIC was higher than FLC throughout the water column. Prokaryotic (determined by T-RFLP) and viral (determined by RAPD-PCR) community composition was depth-stratified inside and outside the VFZ. The viral community was more modified both with depth and over distance inside the VFZ as compared to the northern section and to the prokaryotic communities. However, no clusters of prokaryotic and viral communities characteristic for the VFZ were identified. Based on our observations, we conclude that turbulent mixing of the deep water masses impacts not only the physico-chemical parameters of the mixing zone but also the interaction between viruses and prokaryotes due to a stimulation of the overall activity. However, only minor effects of deep water mixing were observed on the community composition of the dominant prokaryotes and viruses. PMID:24917857

Organic matter diagenesis within the water column and surface sediments of the northern Sargasso Sea revealed by lipid biomarkers

NASA Astrophysics Data System (ADS)

Conte, M. H.; Pedrosa Pàmies, R.; Weber, J.

2017-12-01

The intensity of particle cycling processes within the mesopelagic and bathypelagic ocean controls the length scale of organic material (OM) remineralization and diagenetic transformations of OM composition through the water column and into the sediments. To elucidate the OM cycling in the oligotrophic North Atlantic gyre, we analyzed lipid biomarkers in the suspended particles (30-4400 m depth, 100 mab), the particle flux (500 m, 1500 m and 3200 m depth), and in the underlying surficial sediments (0-0.5 cm, 4500-4600 m depth) collected at the Oceanic Flux Program (OFP) time series site located 75km SE of Bermuda. Changes in lipid biomarker concentration and composition with depth highlight the rapid remineralization of OM within the upper mesopelagic layer and continuing diagenetic transformations of OM throughout the water column and within surficial sediments. Despite observed similarities in biomarker composition in suspended and sinking particles, results show there are also consistent differences in relative contributions of phytoplankton-, bacterial- and zooplankton-derived sources that are maintained throughout the water column. For example, sinking particles are more depleted in labile biomarkers (e.g. polyunsaturated fatty acids (PUFA)) and more enriched in bacteria-derived biomarkers (e.g. hopanoids and odd/branched fatty acids) and indicators of fecal-derived OM (e.g. saturated fatty acids, FA 18:1w9 and cholesterol) than in the suspended pool. Strong seasonality in deep (3200 m) fluxes of phytoplankton-derived biomarkers reflect the seasonal input of bloom-derived material to underlying sediments. The rapid diagenetic alteration of this bloom-derived input is evidenced by depletion of PUFAs and enrichment of microbial biomarkers (e.g. odd/branched fatty acids) in surficial sediments over a two month period.

Reconstructing ecosystem functions of the active microbial community of the Baltic Sea oxygen depleted sediments.

PubMed

Thureborn, Petter; Franzetti, Andrea; Lundin, Daniel; Sjöling, Sara

2016-01-01

Baltic Sea deep water and sediments hold one of the largest anthropogenically induced hypoxic areas in the world. High nutrient input and low water exchange result in eutrophication and oxygen depletion below the halocline. As a consequence at Landsort Deep, the deepest point of the Baltic Sea, anoxia in the sediments has been a persistent condition over the past decades. Given that microbial communities are drivers of essential ecosystem functions we investigated the microbial community metabolisms and functions of oxygen depleted Landsort Deep sediments by metatranscriptomics. Results show substantial expression of genes involved in protein metabolism demonstrating that the Landsort Deep sediment microbial community is active. Identified expressed gene suites of metabolic pathways with importance for carbon transformation including fermentation, dissimilatory sulphate reduction and methanogenesis were identified. The presence of transcripts for these metabolic processes suggests a potential for heterotrophic-autotrophic community synergism and indicates active mineralisation of the organic matter deposited at the sediment as a consequence of the eutrophication process. Furthermore, cyanobacteria, probably deposited from the water column, are transcriptionally active in the anoxic sediment at this depth. Results also reveal high abundance of transcripts encoding integron integrases. These results provide insight into the activity of the microbial community of the anoxic sediment at the deepest point of the Baltic Sea and its possible role in ecosystem functioning.

Reconstructing ecosystem functions of the active microbial community of the Baltic Sea oxygen depleted sediments

PubMed Central

Franzetti, Andrea; Lundin, Daniel; Sjöling, Sara

2016-01-01

Baltic Sea deep water and sediments hold one of the largest anthropogenically induced hypoxic areas in the world. High nutrient input and low water exchange result in eutrophication and oxygen depletion below the halocline. As a consequence at Landsort Deep, the deepest point of the Baltic Sea, anoxia in the sediments has been a persistent condition over the past decades. Given that microbial communities are drivers of essential ecosystem functions we investigated the microbial community metabolisms and functions of oxygen depleted Landsort Deep sediments by metatranscriptomics. Results show substantial expression of genes involved in protein metabolism demonstrating that the Landsort Deep sediment microbial community is active. Identified expressed gene suites of metabolic pathways with importance for carbon transformation including fermentation, dissimilatory sulphate reduction and methanogenesis were identified. The presence of transcripts for these metabolic processes suggests a potential for heterotrophic-autotrophic community synergism and indicates active mineralisation of the organic matter deposited at the sediment as a consequence of the eutrophication process. Furthermore, cyanobacteria, probably deposited from the water column, are transcriptionally active in the anoxic sediment at this depth. Results also reveal high abundance of transcripts encoding integron integrases. These results provide insight into the activity of the microbial community of the anoxic sediment at the deepest point of the Baltic Sea and its possible role in ecosystem functioning. PMID:26823996

An intercomparison of three methods for the large-scale isolation of oceanic dissolved organic matter

USGS Publications Warehouse

Green, Nelson W.; Perdue, E. Michael; Aiken, George R.; Butler, Kenna D.; Chen, Hongmei; Dittmar, Thorsten; Niggemann, Jutta; Stubbins, Aron

2014-01-01

Dissolved organic matter (DOM) was isolated from large volumes of deep (674 m) and surface (21 m) ocean water via reverse osmosis/electrodialysis (RO/ED) and two solid-phase extraction (SPE) methods (XAD-8/4 and PPL) at the Natural Energy Laboratory of Hawaii Authority (NELHA). By applying the three methods to common water samples, the efficiencies of XAD, PPL and RO/ED DOM isolation were compared. XAD recovered 42% of dissolved organic carbon (DOC) from deep water (25% with XAD-8; 17% with XAD-4) and 30% from surface water (16% with XAD-8; 14% with XAD-4). PPL recovered 61 ± 3% of DOC from deep water and 61% from surface water. RO/ED recovered 82 ± 3% of DOC from deep water, 14 ± 3% of which was recovered in a sodium hydroxide rinse, and 75 ± 5% of DOC from surface water, with 12 ± 2% in the sodium hydroxide rinse. The highest recoveries of all were achieved by the sequential isolation of DOC, first with PPL and then via RO/ED. This combined technique recovered 98% of DOC from a deep water sample and 101% of DOC from a surface water sample. In total, 1.9, 10.3 and 1.6 g-C of DOC were collected via XAD, PPL and RO/ED, respectively. Rates of DOC recovery using the XAD, PPL and RO/ED methods were 10, 33 and 10 mg-C h− 1, respectively. Based upon C/N ratios, XAD isolates were heavily C-enriched compared with water column DOM, whereas RO/ED and PPL ➔ RO/ED isolate C/N values were most representative of the original DOM. All techniques are suitable for the isolation of large amounts of DOM with purities suitable for most advanced analytical techniques. Coupling PPL and RO/ED techniques may provide substantial progress in the search for a method to quantitatively isolate oceanic DOC, bringing the entirety of the DOM pool within the marine chemist's analytical window.

Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea.

PubMed

Yakimov, Michail M; La Cono, Violetta; Denaro, Renata; D'Auria, Giuseppe; Decembrini, Franco; Timmis, Kenneth N; Golyshin, Peter N; Giuliano, Laura

2007-12-01

Meso- and bathypelagic ecosystems represent the most common marine ecological niche on Earth and contain complex communities of microorganisms that are for the most part ecophysiologically poorly characterized. Gradients of physico-chemical factors (for example, depth-related gradients of light, temperature, salinity, nutrients and pressure) constitute major forces shaping ecosystems at activity 'hot spots' on the ocean floor, such as hydrothermal vents, cold seepages and mud volcanoes and hypersaline lakes, though the relationships between community composition, activities and environmental parameters remain largely elusive. We report here results of a detailed study of primary producing microbial communities in the deep Eastern Mediterranean Sea. The brine column of the deep anoxic hypersaline brine lake, L'Atalante, the overlying water column and the brine-seawater interface, were characterized physico- and geochemically, and microbiologically, in terms of their microbial community compositions, functional gene distributions and [(14)C]bicarbonate assimilation activities. The depth distribution of genes encoding the crenarchaeal ammonia monooxygenase alpha subunit (amoA), and the bacterial ribulose-1,5-biphosphate carboxylase/oxygenase large subunit (RuBisCO), was found to coincide with two different types of chemoautotrophy. Meso- and bathypelagic microbial communities were enriched in ammonia-oxidizing Crenarchaeota, whereas the autotrophic community at the oxic/anoxic interface of L'Atalante lake was dominated by Epsilonproteobacteria and sulfur-oxidizing Gammaproteobacteria. These autotrophic microbes are thus the basis of the food webs populating these deep-sea ecosystems.

Pressure and temperature interactions on aerobic metabolism of migrating European silver eel.

PubMed

Scaion, D; Belhomme, M; Sébert, P

2008-12-31

During their migration for reproduction, European eels have to cope with many environmental factors changes. The main changes concern hydrostatic pressure and temperature that are important environmental and physiological factors when considering life in the deep sea. We focus on the consequences of pressure (from 0.1 to 12.1MPa by 1MPa steps) and temperature (9, 15, 22 degrees C) shifts on the oxygen consumption (MO(2)) at the whole animal level. Because of their morphological differences, we are also interested in males and females to evaluate the best conditions for migration. Firstly, whatever temperature, males present higher aerobic capacities than females at atmospheric pressure. Secondly, an increase in temperature increases the pressure effects in males (synergy) but decreases them in females (opposite effects). We raise the hypothesis that two different migration strategies could be used in the water column in order to reach the breeding area: males could tend to privilege pressure and cold waters (deep water) and females, on the other hand, could opt for warmer temperature surface waters.

The long-term variability of chemical structure of deep-water basins of the Caspian Sea

NASA Astrophysics Data System (ADS)

Serebrennikova, Ekaterina

2017-04-01

The Caspian Sea is a unique water object: the biggest lake on Earth, so large that it actually functions as a sea, but totally isolated from the World Ocean and extremely responsive to the climatic changes. The Caspian Sea is characterized by periodical large-scale sea level oscillations - it is one of the manifestations of multidecadal climatic fluctuations on East European Plain. In order to monitor the environmental conditions staff of the Laboratory of Hydrochemistry of Russian Federal Research Institution of Fisheries and Oceanography (FSBSI "VNIRO") in collaboration with other russian scientific institutions conducts annual research cruises to the Caspian Sea. For the last 40 years natural and anthropogenic climatic changes caused a stable stratification of the water column in both Caspian basins and the nourishment depletion of the photic layer, created and annually aggravated by the biological pump. The data, collected in annual expeditions since 1995, shows the progressing hypoxia below the depth of 400 meters and the formation of hydrogen sulfidic contamination in bottom waters. The cumulative effect of natural variability and extremely intensive anthropogenic stress creates a very depressing environment for all the aquatics, from phytoplankton to unique commercial species. In the last 20 years the level of the Caspian Sea has lowered for 2,5 meters. This is a result of changes in the water balance of the Caspian Sea, that includes the decrease of freshwater income. In long-term perspective this leads to an increase in surface water density and in winter convection depth. However up until 2016 the stratification of the water column stayed stable, so the deep waters were isolated form the atmosphere. Annual monitoring since 1995 has shown gradual oxygen depletion and intensive accumulation of biogenic elements. In 2016 concentrations of phosphate and nitrate were the highest ever registered for the Caspian Sea. The analysis of the research conducted in last 4 years shows the increasing possibility of major change in the hydrological and chemical structure of the waters in both Caspian deep-water basins. In June 2016 oxygenated waters were registered at the bottom of the Middle Caspian Basin for the first time in the last 20 years. This allows us to conclude, that in winter 2015-2016 the environmental conditions created surface water, dense enough to reach the bottom of the basin cascading the continental slope. Based on data, collected over the last century, the sea level, critical for the major winter convection to occur, was calculated, and in 2015 the level of the Caspian Sea has reached this mark. If the sea level lowering continues we can expect an intensive convective deep-water ventilation caused by winter cascading. This can lead to fundamental shift in nourishment enriching mechanisms of the photic layer that can boost the primary production and have positive repercussions throughout all the food chains in Caspian ecosystem.

Stealth export of hydrogen and methane from a low temperature serpentinization system

NASA Astrophysics Data System (ADS)

Larson, B. I.; Lang, S. Q.; Lilley, M. D.; Olson, E. J.; Lupton, J. E.; Nakamura, K.; Buck, N. J.

2015-11-01

Chemical input to the deep sea from hydrothermal systems is a globally distributed phenomenon. Hydrothermal discharge is one of the primary mechanisms by which the Earth's interior processes manifest themselves at the Earth's surface, and it provides a source of energy for autotrophic processes by microbes that are too deep to capitalize on sunlight. Much is known about the water-column signature of this discharge from high-temperature mid-ocean Ridge (MOR) environments and their neighboring low-temperature counterparts. Hydrothermal discharge farther away from the ridge, however, has garnered less attention, owing in part to the difficulty in finding this style of venting, which eludes methods of detection that work well for high-temperature 'black smoker'-type venting. Here we present a case study of the plume from one such 'invisible' off-axis environment, The Lost City, with an emphasis on the dissolved volatile content of the hydrothermal plume. Serpentinization and abiotic organic synthesis generate significant concentrations of H2 and CH4 in vent fluid, but these species are unevenly transported to the overlying plume, which itself appears to be a composite of two different sources. A concentrated vent cluster on the talus slope channels fluid through at least eight chimneys, producing a water-column plume with the highest observed concentrations of CH4 in the field. In contrast, a saddle in the topography leading up to a carbonate cap hosts broadly distributed, nearly invisible venting apparent only in its water-column signals of redox potential and dissolved gas content, including the highest observed plume H2. After normalizing H2 and CH4 to the 3He background-corrected anomaly (3HeΔ) to account for mixing and relative amount of mantle input, it appears that, while a minimum of 60% of CH4 is transported out of the system, greater than 90% of the H2 is consumed in the subsurface prior to venting. The exception to this pattern occurs in the plume originating from the area dubbed Chaff Beach, in which somewhat more than 10% of the original H2 remains, indicating that this otherwise unremarkable plume, and others like it, may represent a significant source of H2 to the deep sea.

The Sulu Sea as Carbon Dioxide Sink

NASA Astrophysics Data System (ADS)

Ferrera, C. M.; Jacinto, G. S.; Chen, C. T. A.

2016-12-01

The Sulu Sea, one of the marginal seas in the West Pacific and the largest internal sea in the Philippines, is characterized by its unique deep water ventilation pattern and high sediment organic carbon and CaCO3 content. Studies on the dissolved CO2 system in the Sulu Sea have remarkably shown that anthropogenic CO2 has already penetrated to the bottom of this 5km-deep basin, albeit limited to a dataset from a single station in December 1996. To further understand the role of this tropical marginal sea as CO2 sink and to assess its behavior as a CO2 sink during the 11-year period, water samples for dissolved CO2 parameters from two deep stations of high productivity and low productivity were collected in December 2007/January 2008 and were compared with the 1996 data. Results suggest that the surface waters in the low productivity region might have been acidifying at a rate of -0.0012 pH unit yr-1. Atmospheric CO2 increased at +1.9 ppmv yr-1 and seawater fCO2 at +3.30 μatm yr-1. Through deep water ventilation, anthropogenic CO2 has penetrated the water column thereby making the deeper waters a sink of anthropogenic CO2. But then the presence and dissolution of CaCO3 deposits at the sea floor and along the Sulu Sea slopes as a result of the reaction with this anthropogenic CO2 probably neutralizes the acidification at depths as shown by the increase in total alkalinity (+0.57 μmol kg-1 yr-1), and facilitates further uptake of CO2 from the atmosphere. Therefore, productivity at Sulu Sea surface waters results to sequestration of CO2 from the atmosphere to the sediment sink through organic carbon and CaCO3 deposits. While high temperature and low productivity surface waters make the Sulu Sea a source of CO2 to the atmosphere, ventilation patterns make the deep waters of the Sulu Sea an efficient sink for anthropogenic CO2. Given the larger area occupied by the CO2 sink deep waters compared to the CO2 source surface waters including an upwelling area, the Sulu Sea could possibly be a "net" CO2 sink, an important contribution to the otherwise underestimated inventory of CO2 from marginal seas.

Is Centrophorus squamosus a highly migratory deep-water shark?

NASA Astrophysics Data System (ADS)

Rodríguez-Cabello, Cristina; Sánchez, Francisco

2014-10-01

Deep-water sharks are considered highly vulnerable species due to their life characteristics and very low recovery capacity against overfishing. However, there is still limited information on the ecology or population connectivity of these species. The aim of this study was to investigate if the species Centrophorus squamosus could make long displacements and thus confirm the existence of connectivity between different deep-water areas. In addition, the study was the first attempt to use tagging techniques on deep-water sharks, since it has never been undertaken before. Five C. squamosus were tagged with satellite tags (PAT) in the El Cachucho Marine Protected Area (Le Danois Bank) located in waters of the North of Spain, Cantabrian Sea (NE Atlantic). Data from four of these tags were recovered. One of the sharks travelled approximately 287 nm toward the north east (French continental shelf) hypothetically following the continental slope at a mean depth of 901±109 m for 45 days. Two other sharks spent almost 4 months traveling, in which time they moved 143 and 168 nm, respectively, to the west (Galician coast). Finally, another leafscale gulper shark travelled to the NW (Porcupine Bank) during a period of 3 months at a mean depth of 940±132 m. Depth and temperature preferences for all the sharks are discussed. Minimum and maximum depths recorded were 496 and 1848 m, respectively. The temperature range was between 6.2 and 11.4 °C, but the mean temperature was approximately 9.9±0.7 °C. The sharks made large vertical displacements throughout the water column with a mean daily depth range of 345±27 m. These preliminary results support the suggestion of a whole population in the NE Atlantic and confirm the capacity of this species to travel long distances.

On polarimetric radar signatures of deep convection for model evaluation: columns of specific differential phase observed during MC3E

DOE Office of Scientific and Technical Information (OSTI.GOV)

van Lier-Walqui, Marcus; Fridlind, Ann; Ackerman, Andrew S

2016-02-01

The representation of deep convection in general circulation models is in part informed by cloud-resolving models (CRMs) that function at higher spatial and temporal resolution; however, recent studies have shown that CRMs often fail at capturing the details of deep convection updrafts. With the goal of providing constraint on CRM simulation of deep convection updrafts, ground-based remote sensing observations are analyzed and statistically correlated for four deep convection events observed during the Midlatitude Continental Convective Clouds Experiment (MC3E). Since positive values of specific differential phase observed above the melting level are associated with deep convection updraft cells, so-called columns aremore » analyzed using two scanning polarimetric radars in Oklahoma: the National Weather Service Vance WSR-88D (KVNX) and the Department of Energy C-band Scanning Atmospheric Radiation Measurement (ARM) Precipitation Radar (C-SAPR). KVNX and C-SAPR volumes and columns are then statistically correlated with vertical winds retrieved via multi-Doppler wind analysis, lightning flash activity derived from the Oklahoma Lightning Mapping Array, and KVNX differential reflectivity . Results indicate strong correlations of volume above the melting level with updraft mass flux, lightning flash activity, and intense rainfall. Analysis of columns reveals signatures of changing updraft properties from one storm event to another as well as during event evolution. Comparison of to shows commonalities in information content of each, as well as potential problems with associated with observational artifacts.« less

Estimating hydraulic properties using a moving-model approach and multiple aquifer tests

USGS Publications Warehouse

Halford, K.J.; Yobbi, D.

2006-01-01

A new method was developed for characterizing geohydrologic columns that extended >600 m deep at sites with as many as six discrete aquifers. This method was applied at 12 sites within the Southwest Florida Water Management District. Sites typically were equipped with multiple production wells, one for each aquifer and one or more observation wells per aquifer. The average hydraulic properties of the aquifers and confining units within radii of 30 to >300 m were characterized at each site. Aquifers were pumped individually and water levels were monitored in stressed and adjacent aquifers during each pumping event. Drawdowns at a site were interpreted using a radial numerical model that extended from land surface to the base of the geohydrologic column and simulated all pumping events. Conceptually, the radial model moves between stress periods and recenters on the production well during each test. Hydraulic conductivity was assumed homogeneous and isotropic within each aquifer and confining unit. Hydraulic property estimates for all of the aquifers and confining units were consistent and reasonable because results from multiple aquifers and pumping events were analyzed simultaneously. Copyright ?? 2005 National Ground Water Association.

Dynamic Bubble Surface Tension Measurements in Northwest Atlantic Seawater

NASA Astrophysics Data System (ADS)

Kieber, D. J.; Long, M. S.; Keene, W. C.; Kinsey, J. D.; Frossard, A. A.; Beaupre, S. R.; Duplessis, P.; Maben, J. R.; Lu, X.; Chang, R.; Zhu, Y.; Bisgrove, J.

2017-12-01

Numerous reports suggest that most organic matter (OM) associated with newly formed primary marine aerosol (PMA) originates from the sea-surface microlayer. However, surface-active OM rapidly adsorbs onto bubble surfaces in the water column and is ejected into the atmosphere when bubbles burst at the air-water interface. Here we present dynamic surface tension measurements of bubbles produced in near surface seawater from biologically productive and oligotrophic sites and in deep seawater collected from 2500 m in the northwest Atlantic. In all cases, the surface tension of bubble surfaces decreased within seconds after the bubbles were exposed to seawater. These observations demonstrate that bubble surfaces are rapidly saturated by surfactant material scavenged from seawater. Spatial and diel variability in bubble surface evolution indicate corresponding variability in surfactant concentrations and/or composition. Our results reveal that surface-active OM is found throughout the water column, and that at least some surfactants are not of recent biological origin. Our results also support the hypothesis that the surface microlayer is a minor to negligible source of OM associated with freshly produced PMA.

δ 13C evidence that high primary productivity delayed recovery from end-Permian mass extinction

NASA Astrophysics Data System (ADS)

Meyer, K. M.; Yu, M.; Jost, A. B.; Kelley, B. M.; Payne, J. L.

2011-02-01

Euxinia was widespread during and after the end-Permian mass extinction and is commonly cited as an explanation for delayed biotic recovery during Early Triassic time. This anoxic, sulfidic episode has been ascribed to both low- and high-productivity states in the marine water column, leaving the causes of euxinia and the mechanisms underlying delayed recovery poorly understood. Here we use isotopic analysis to examine the changing chemical structure of the water column through the recovery interval and thereby better constrain paleoproductivity. The δ 13C of limestones from 5 stratigraphic sections in south China displays a negative gradient of approximately 4‰ from shallow-to-deep water facies within the Lower Triassic. This intense gradient declines within Spathian and lowermost Middle Triassic strata, coincident with accelerated biotic recovery and carbon cycle stabilization. Model simulations show that high nutrient levels and a vigorous biological pump are required to sustain such a large gradient in δ 13C, indicating that Early Triassic ocean anoxia and delayed recovery of benthic animal ecosystems resulted from too much productivity rather than too little.

Propagation of Exploration Seismic Sources in Shallow Water

NASA Astrophysics Data System (ADS)

Diebold, J. B.; Tolstoy, M.; Barton, P. J.; Gulick, S. P.

2006-05-01

The choice of safety radii to mitigation the impact of exploration seismic sources upon marine mammals is typically based on measurement or modeling in deep water. In shallow water environments, rule-of-thumb spreading laws are often used to predict the falloff of amplitude with offset from the source, but actual measurements (or ideally, near-perfect modeling) are still needed to account for the effects of bathymetric changes and subseafloor characteristics. In addition, the question: "how shallow is 'shallow?'" needs an answer. In a cooperative effort by NSF, MMS, NRL, IAGC and L-DEO, a series of seismic source calibration studies was carried out in the Northern Gulf of Mexico during 2003. The sources used were the two-, six-, ten-, twelve-, and twenty-airgun arrays of R/V Ewing, and a 31-element, 3-string "G" gun array, deployed by M/V Kondor, an exploration industry source ship. The results of the Ewing calibrations have been published, documenting results in deep (3200m) and shallow (60m) water. Lengthy analysis of the Kondor results, presented here, suggests an approach to answering the "how shallow is shallow" question. After initially falling off steadily with source-receiver offset, the Kondor levels suddenly increased at a 4km offset. Ray-based modeling with a complex, realistic source, but with a simple homogeneous water column-over-elastic halfspace ocean shows that the observed pattern is chiefly due to geophysical effects, and not focusing within the water column. The same kind of modeling can be used to predict how the amplitudes will change with decreasing water depth, and when deep-water safety radii may need to be increased. Another set of data (see Barton, et al., this session) recorded in 20 meters of water during early 2005, however, shows that simple modeling may be insufficient when the geophysics becomes more complex. In this particular case, the fact that the seafloor was within the near field of the R/V Ewing source array seems to have given rise to seismic phases not normally seen in marine survey data acquired in deeper water. The associated partitioning of energy is likely to have caused the observed uncharacteristically rapid loss of energy with distance. It appears that in this case, the shallow-water marine mammal safety mitigation measures prescribed and followed were far more stringent than they needed to be. A new approach, wherein received levels detected by the towed 6-km multichannel hydrophone array may be used to modify safety radii has recently been proposed, based on these observations.

Determination of water saturation using gas phase partitioning tracers and time-lapse electrical conductivity measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Timothy C.; Oostrom, Martinus; Truex, Michael J.

2013-05-21

Water saturation is an important indicator of contaminant distribution and plays a governing role in contaminant transport within the vadose zone. Understanding the water saturation distribution is critical for both remediation and contaminant flux monitoring in unsaturated environments. In this work we propose and demonstrate a method of remotely determining water saturation levels using gas phase partitioning tracers and time-lapse bulk electrical conductivity measurements. The theoretical development includes the partitioning chemistry for the tracers we demonstrate (ammonia and carbon dioxide), as well as a review of the petrophysical relationship governing how these tracers influence bulk conductivity. We also investigate methodsmore » of utilizing secondary information provided by electrical conductivity breakthrough magnitudes induced by the tracers. We test the method on clean, well characterized, intermediate-scale sand columns under controlled conditions. Results demonstrate the capability to predict partitioning coefficients and accurately monitor gas breakthrough curves along the length of the column according to the corresponding electrical conductivity response, leading to accurate water saturation estimates. This work is motivated by the need to develop effective characterization and monitoring techniques for contaminated deep vadose zone environments, and provides a proof-of-concept toward uniquely characterizing and monitoring water saturation levels at the field scale and in three-dimensions using electrical resistivity tomography.« less

The vertical structure of upper ocean variability at the Porcupine Abyssal Plain during 2012–2013

PubMed Central

Heywood, Karen J.; Thompson, Andrew F.; Binetti, Umberto; Kaiser, Jan

2016-01-01

Abstract This study presents the characterization of variability in temperature, salinity and oxygen concentration, including the vertical structure of the variability, in the upper 1000 m of the ocean over a full year in the northeast Atlantic. Continuously profiling ocean gliders with vertical resolution between 0.5 and 1 m provide more information on temporal variability throughout the water column than time series from moorings with sensors at a limited number of fixed depths. The heat, salt and dissolved oxygen content are quantified at each depth. While the near surface heat content is consistent with the net surface heat flux, heat content of the deeper layers is driven by gyre‐scale water mass changes. Below ∼150m, heat and salt content display intraseasonal variability which has not been resolved by previous studies. A mode‐1 baroclinic internal tide is detected as a peak in the power spectra of water mass properties. The depth of minimum variability is at ∼415m for both temperature and salinity, but this is a depth of high variability for oxygen concentration. The deep variability is dominated by the intermittent appearance of Mediterranean Water, which shows evidence of filamentation. Susceptibility to salt fingering occurs throughout much of the water column for much of the year. Between about 700–900 m, the water column is susceptible to diffusive layering, particularly when Mediterranean Water is present. This unique ability to resolve both high vertical and temporal variability highlights the importance of intraseasonal variability in upper ocean heat and salt content, variations that may be aliased by traditional observing techniques. PMID:27840785

14. Detail view of columns, capitals and beams at south ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

14. Detail view of columns, capitals and beams at south end of north section of mill. Note the transition from deep pocket to shallow pocket column capitals. - Lowe Mill, Eighth Avenue, Southwest, Huntsville, Madison County, AL

Physics of greenhouse effect and convection in warm oceans

NASA Technical Reports Server (NTRS)

Inamdar, A. K.; Ramanathan, V.

1994-01-01

Sea surface temperature (SST) in roughly 50% of the tropical Pacific Ocean is warm enough (SST greater than 300 K) to permit deep convection. This paper examines the effects of deep convection on the climatological mean vertical distributions of water vapor and its greenhouse effect over such warm oceans. The study, which uses a combination of satellite radiation budget observations, atmospheric soundings deployed from ships, and radiation model calculations, also examines the link between SST, vertical distribution of water vapor, and its greenhouse effect in the tropical oceans. Since the focus of the study is on the radiative effects of water vapor, the radiation model calculations do not include the effects of clouds. The data are grouped into nonconvective and convective categories using SST as an index for convective activity. On average, convective regions are more humid, trap significantly more longwave radiation, and emit more radiation to the sea surface. The greenhouse effect in regions of convection operates as per classical ideas, that is, as the SST increases, the atmosphere traps the excess longwave energy emitted by the surface and reradiates it locally back to the ocean surface. The important departure from the classical picture is that the net (up minus down) fluxes at the surface and at the top of the atmosphere decrease with an increase in SST; that is, the surface and the surface-troposphere column lose the ability to radiate the excess energy to space. The cause of this super greenhouse effect at the surface is the rapid increase in the lower-troposphere humidity with SST; that of the column is due to a combination of increase in humidity in the entire column and increase in the lapse rate within the lower troposphere. The increase in the vertical distribution of humidity far exceeds that which can be attributed to the temperature dependence of saturation vapor pressure; that is, the tropospheric relative humidity is larger in convective regions. The positive coupling between SST and the radiative warming of the surface by the water vapor greenhouse effect is also shown to exist on interannual time scales.

Autonomous gliders reveal features of the water column associated with foraging by adelie penguins.

PubMed

Kahl, L Alex; Schofield, Oscar; Fraser, William R

2010-12-01

Despite their strong dependence on the pelagic environment, seabirds and other top predators in polar marine ecosystems are generally studied during their reproductive phases in terrestrial environments. As a result, a significant portion of their life history is understudied which in turn has led to limited understanding. Recent advances in autonomous underwater vehicle (AUV) technologies have allowed satellite-tagged Adélie penguins to guide AUV surveys of the marine environment at the Palmer Long-Term Ecological Research (LTER) site on the western Antarctic Peninsula. Near real-time data sent via Iridium satellites from the AUVs to a centralized control center thousands of miles away allowed scientists to adapt AUV sampling strategies to meet the changing conditions of the subsurface. Such AUV data revealed the water masses and fine-scale features associated with Adélie penguin foraging trips. During this study, the maximum concentration of chlorophyll was between 30 and 50 m deep. Encompassing this peak in the chlorophyll concentration, within the water-column, was a mixture of nutrient-laden Upper Circumpolar Deep (UCDW) and western Antarctic Peninsula winter water (WW). Together, data from the AUV survey and penguin dives reveal that 54% of foraging by Adélie penguins occurs immediately below the chlorophyll maximum. These data demonstrate how bringing together emerging technologies, such as AUVs, with established methods such as the radio-tagging of penguins can provide powerful tools for monitoring and hypothesis testing of previously inaccessible ecological processes. Ocean and atmosphere temperatures are expected to continue increasing along the western Antarctic Peninsula, which will undoubtedly affect regional marine ecosystems. New and emerging technologies such as unmanned underwater vehicles and individually mounted satellite tracking devices will provide the tools critical to documenting and understanding the widespread ecological change expected in polar regions.

Near-UV OH Prompt Emission in the Innermost Coma of 103P/Hartley 2

DOE Office of Scientific and Technical Information (OSTI.GOV)

La Forgia, Fiorangela; Bodewits, Dennis; A’Hearn, Michael F.

The Deep Impact spacecraft flyby of comet 103P/Hartley 2 occurred on 2010 November 4, 1 week after perihelion with a closest approach (CA) distance of about 700 km. We used narrowband images obtained by the Medium Resolution Imager on board the spacecraft to study the gas and dust in the innermost coma. We derived an overall dust reddening of 15%/100 nm between 345 and 749 nm and identified a blue enhancement in the dust coma in the sunward direction within 5 km from the nucleus, which we interpret as a localized enrichment in water ice. OH column density maps show an anti-sunwardmore » enhancement throughout the encounter, except for the highest-resolution images, acquired at CA, where a radial jet becomes visible in the innermost coma, extending up to 12 km from the nucleus. The OH distribution in the inner coma is very different from that expected for a fragment species. Instead, it correlates well with the water vapor map derived by the HRI-IR instrument on board Deep Impact . Radial profiles of the OH column density and derived water production rates show an excess of OH emission during CA that cannot be explained with pure fluorescence. We attribute this excess to a prompt emission process where photodissociation of H{sub 2}O directly produces excited OH*( A {sup 2}Σ{sup +}) radicals. Our observations provide the first direct imaging of near-UV prompt emission of OH. We therefore suggest the use of a dedicated filter centered at 318.8 nm to directly trace the water in the coma of comets.« less

Hooded seal Cystophora cristata foraging areas in the Northeast Atlantic Ocean—Investigated using three complementary methods

PubMed Central

Lydersen, Christian; Biuw, Martin; Haug, Tore; Fedak, Mike A.; Kovacs, Kit M.

2017-01-01

Identifying environmental characteristics that define the ecological niche of a species is essential to understanding how changes in physical conditions might affect its distribution and other aspects of its ecology. The present study used satellite relay data loggers (SRDLs) to study habitat use by Northeast Atlantic hooded seals (N = 20; 9 adult females, 3 adult males, and 8 juveniles). Three different methods were used in combination to achieve maximum insight regarding key foraging areas for hooded seals in this region, which have decline by 85% in recent decades: 1) first passage time (FPT); 2) vertical transit rate and; 3) change in dive drift rate. Generalized additive mixed models (GAMM) were applied to each method to determine whether specific habitat characteristics were associated with foraging. Separate models were run for the post-molting and the post-breeding seasons; sex and age classes were included in the GAMMs. All three methods highlighted a few common geographic areas as being important foraging zones; however, there were also some different areas identified by the different methods, which highlights the importance of using multiple indexes when analyzing tracking and diving data to study foraging behavior. Foraging occurred most commonly in relatively shallow areas with high Sea Surface Temperatures (SST), corresponding to continental shelf areas with Atlantic Water masses. All age and sex classes overlapped spatially to some extent, but the different age and sex groups showed differences in the bathymetry of their foraging areas as well as in their vertical use of the water column. When foraging, pups dove in the upper part of the water column in relatively deep areas. Adult females foraged relatively shallowly in deep water areas too, though in shallower areas than pups. Adult males foraged close to the bottom in shallower areas. PMID:29211797

Detection and characterisation of deep-sea benthopelagic animals from an autonomous underwater vehicle with a multibeam echosounder: A proof of concept and description of data-processing methods

NASA Astrophysics Data System (ADS)

Dunlop, Katherine M.; Jarvis, Toby; Benoit-Bird, Kelly J.; Waluk, Chad M.; Caress, David W.; Thomas, Hans; Smith, Kenneth L.

2018-04-01

Benthopelagic animals are an important component of the deep-sea ecosystem, yet are notoriously difficult to study. Multibeam echosounders (MBES) deployed on autonomous underwater vehicles (AUVs) represent a promising technology for monitoring this elusive fauna at relatively high spatial and temporal resolution. However, application of this remote-sensing technology to the study of small (relative to the sampling resolution), dispersed and mobile animals at depth does not come without significant challenges with respect to data collection, data processing and vessel avoidance. As a proof of concept, we used data from a downward-looking RESON SeaBat 7125 MBES mounted on a Dorado-class AUV to detect and characterise the location and movement of backscattering targets (which were likely to have been individual fish or squid) within 50 m of the seafloor at 800 m depth in Monterey Bay, California. The targets were detected and tracked, enabling their numerical density and movement to be characterised. The results revealed a consistent movement of targets downwards away from the AUV that we interpreted as an avoidance response. The large volume and complexity of the data presented a computational challenge, while reverberation and noise, spatial confounding and a marginal sampling resolution relative to the size of the targets caused difficulties for reliable and comprehensive target detection and tracking. Nevertheless, the results demonstrate that an AUV-mounted MBES has the potential to provide unique and detailed information on the in situ abundance, distribution, size and behaviour of both individual and aggregated deep-sea benthopelagic animals. We provide detailed data-processing information for those interested in working with MBES water-column data, and a critical appraisal of the data in the context of aquatic ecosystem research. We consider future directions for deep-sea water-column echosounding, and reinforce the importance of measures to mitigate vessel avoidance in studies of aquatic ecosystems.

Anomalies of the upper water column in the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Rivetti, Irene; Boero, Ferdinando; Fraschetti, Simonetta; Zambianchi, Enrico; Lionello, Piero

2017-04-01

The evolution of the upper water column in the Mediterranean Sea during more than 60 years is reconstructed in terms of few parameters describing the mixed layer and the seasonal thermocline. The analysis covers the period 1945-2011 using data from three public sources: MEDAR-MEDATLAS, World Ocean Database, MFS-VOS program. Five procedures for estimating the mixed layer depth are described, discussed and compared using the 20-year long time series of temperature profiles of the DYFAMED station in the Ligurian Sea. On this basis the so-called three segments profile model (which approximates the upper water column with three segments representing mixed layer, thermocline and deep layer) has been selected for a systematic analysis at Mediterranean scale. A widespread increase of the thickness and temperature of the mixed layer, increase of the depth and decrease of the temperature of the thermocline base have been observed in summer and autumn during the recent decades. It is shown that positive temperature extremes of the mixed layer and of its thickness are potential drivers of the mass mortalities of benthic invertebrates documented since 1983. Hotspots of mixed layer anomalies have been also identified. These results refine previous analyses showing that ongoing and future warming of upper Mediterranean is likely to increase mass mortalities by producing environmental conditions beyond the limit of tolerance of some benthic species.

Modeling Cooling Rates of Martian Flood Basalt Columns

NASA Astrophysics Data System (ADS)

Weiss, D. K.; Jackson, B.; Milazzo, M. P.; Barnes, J. W.

2011-12-01

Columnar jointing in large basalt flows have been extensively studied and can provide important clues about the emplacement conditions and cooling history of a basalt flow. The recent discovery of basalt columns on Mars in crater walls near Marte Vallis provides an opportunity to infer conditions on early Mars when the Martian basalt flows were laid down. Comparison of the Martian columns to Earth analogs allows us to gain further insight into the early Martian climate, and among the best terrestrial analogs are the basalt columns in the Columbia River Basalt Group (CRBG) in eastern Washington. The CRBG is one of the youngest (< 17 Myrs old) and most extensively studied basalt provinces in the world, extending over 163,700 square km with total thickness exceeding 1 km in some places. The morphologies and textures of CRBG basalt columns suggest that in many places flows ~100 m thick cooled at uniform rates, even deep in the flow interior. Such cooling seems to require the presence of water in the column joints since the flow interiors should have cooled much more slowly than the flow margins if conductive cooling dominated. Secondary features, such pillow basalts, likewise suggest the basalt flows were in direct contact with standing water in many places. At the resolution provided by the orbiting HiRISE camera (0.9 m), the Martian basalt columns resemble the CRBG columns in many respects, and so, subject to important caveats, inferences linking the morphologies of the CRBG columns to their thermal histories can be extended in some respects to the Martian columns. In this presentation, we will describe our analysis of the HiRISE images of the Martian columns and what can be reasonably inferred about their thermal histories and the conditions under which they were emplaced. We will also report on a field expedition to the CRBG in eastern Washington State. During that expedition, we surveyed basalt column outcrops on the ground and from the air using Unmanned Aerial Vehicles to compare ground-truth measurements of the columns to aerial measurements and study the limitations and biases inherent in remote-sensing data of such geological features. D.K.W. acknowledges the South Carolina Space Grant Consortium for travel funding.

Sustained deposition of contaminants from the Deepwater Horizon spill.

PubMed

Yan, Beizhan; Passow, Uta; Chanton, Jeffrey P; Nöthig, Eva-Maria; Asper, Vernon; Sweet, Julia; Pitiranggon, Masha; Diercks, Arne; Pak, Dorothy

2016-06-14

The 2010 Deepwater Horizon oil spill resulted in 1.6-2.6 × 10(10) grams of petrocarbon accumulation on the seafloor. Data from a deep sediment trap, deployed 7.4 km SW of the well between August 2010 and October 2011, disclose that the sinking of spill-associated substances, mediated by marine particles, especially phytoplankton, continued at least 5 mo following the capping of the well. In August/September 2010, an exceptionally large diatom bloom sedimentation event coincided with elevated sinking rates of oil-derived hydrocarbons, black carbon, and two key components of drilling mud, barium and olefins. Barium remained in the water column for months and even entered pelagic food webs. Both saturated and polycyclic aromatic hydrocarbon source indicators corroborate a predominant contribution of crude oil to the sinking hydrocarbons. Cosedimentation with diatoms accumulated contaminants that were dispersed in the water column and transported them downward, where they were concentrated into the upper centimeters of the seafloor, potentially leading to sustained impact on benthic ecosystems.

Sustained deposition of contaminants from the Deepwater Horizon spill

PubMed Central

Yan, Beizhan; Passow, Uta; Chanton, Jeffrey P.; Nöthig, Eva-Maria; Asper, Vernon; Sweet, Julia; Pitiranggon, Masha; Diercks, Arne; Pak, Dorothy

2016-01-01

The 2010 Deepwater Horizon oil spill resulted in 1.6–2.6 × 1010 grams of petrocarbon accumulation on the seafloor. Data from a deep sediment trap, deployed 7.4 km SW of the well between August 2010 and October 2011, disclose that the sinking of spill-associated substances, mediated by marine particles, especially phytoplankton, continued at least 5 mo following the capping of the well. In August/September 2010, an exceptionally large diatom bloom sedimentation event coincided with elevated sinking rates of oil-derived hydrocarbons, black carbon, and two key components of drilling mud, barium and olefins. Barium remained in the water column for months and even entered pelagic food webs. Both saturated and polycyclic aromatic hydrocarbon source indicators corroborate a predominant contribution of crude oil to the sinking hydrocarbons. Cosedimentation with diatoms accumulated contaminants that were dispersed in the water column and transported them downward, where they were concentrated into the upper centimeters of the seafloor, potentially leading to sustained impact on benthic ecosystems. PMID:27247393

Experimental Study on New Multi-Column Tension-Leg-Type Floating Wind Turbine

NASA Astrophysics Data System (ADS)

Zhao, Yong-sheng; She, Xiao-he; He, Yan-ping; Yang, Jian-min; Peng, Tao; Kou, Yu-feng

2018-04-01

Deep-water regions often have winds favorable for offshore wind turbines, and floating turbines currently show the greatest potential to exploit such winds. This work established proper scaling laws for model tests, which were then implemented in the construction of a model wind turbine with optimally designed blades. The aerodynamic, hydrodynamic, and elastic characteristics of the proposed new multi-column tension-leg-type floating wind turbine (WindStar TLP system) were explored in the wave tank testing of a 1:50 scale model at the State Key Laboratory of Ocean Engineering at Shanghai Jiao Tong University. Tests were conducted under conditions of still water, white noise waves, irregular waves, and combined wind, wave, and current loads. The results established the natural periods of the motion, damping, motion response amplitude operators, and tendon tensions of the WindStar TLP system under different environmental conditions, and thus could serve as a reference for further research. Key words: floating wind turbine, model test, WindStar TLP, dynamic response

Bioessential element-depleted ocean following the euxinic maximum of the end-Permian mass extinction

NASA Astrophysics Data System (ADS)

Takahashi, Satoshi; Yamasaki, Shin-ichi; Ogawa, Yasumasa; Kimura, Kazuhiko; Kaiho, Kunio; Yoshida, Takeyoshi; Tsuchiya, Noriyoshi

2014-05-01

We describe variations in trace element compositions that occurred on the deep seafloor of palaeo-superocean Panthalassa during the end-Permian mass extinction based on samples of sedimentary rock from one of the most continuous Permian-Triassic boundary sections of the pelagic deep sea exposed in north-eastern Japan. Our measurements revealed low manganese (Mn) enrichment factor (normalised by the composition of the average upper continental crust) and high cerium anomaly values throughout the section, suggesting that a reducing condition already existed in the depositional environment in the Changhsingian (Late Permian). Other redox-sensitive trace-element (vanadium [V], chromium [Cr], molybdenum [Mo], and uranium [U]) enrichment factors provide a detailed redox history ranging from the upper Permian to the end of the Permian. A single V increase (representing the first reduction state of a two-step V reduction process) detected in uppermost Changhsingian chert beds suggests development into a mildly reducing deep-sea condition less than 1 million years before the end-Permian mass extinction. Subsequently, a more reducing condition, inferred from increases in Cr, V, and Mo, developed in overlying Changhsingian grey siliceous claystone beds. The most reducing sulphidic condition is recognised by the highest peaks of Mo and V (second reduction state) in the uppermost siliceous claystone and overlying lowermost black claystone beds, in accordance with the end-Permian mass extinction event. This significant increase in Mo in the upper Changhsingian led to a high Mo/U ratio, much larger than that of modern sulphidic ocean regions. This trend suggests that sulphidic water conditions developed both at the sediment-water interface and in the water column. Above the end-Permian mass extinction horizon, Mo, V and Cr decrease significantly. On this trend, we provide an interpretation of drawdown of these elements in seawater after the massive element precipitation event during the end-Permian maximum development of the reducing water column. A decrease in the Mo/U ratio despite enrichment of Mo and U also supports that of Mo. Calculations of the total amounts of these elements precipitated compared with the global seawater inventory suggest that when more than 6-10% of the global ocean became euxinic as much as the study section, most of the dissolved elements would precipitate into sediments, resulting in a global element-depleted seawater condition. Mo, V, and Cr act as bioessential elements for both primary producers and animals. The continuing reducing water column and the lack of bioessential elements could have had a considerable effect on primary producer turnover and marine life metabolism not only in the pelagic environment, but also in surrounding marine environments.

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota

NASA Astrophysics Data System (ADS)

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.; Kostka, Joel E.; Hanson, Paul; Chanton, Jeffrey P.

2018-02-01

We characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur, and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and excitation-emission matrix parallel factor analysis components within the peat column. In particular, the intermediate depth zone ( 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputs from surface vegetation. The intermediate depth zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively, these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table, redox oscillation, and pore water advection.

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota: Pore Water DOM composition in a peat bog

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.

We characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and EEM-PARAFAC components within the peat column. In particular the intermediate depth zone (~ 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputs from surface vegetation. The intermediate-depthmore » zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds (PAC) that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate-depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table and redox oscillation and porewater advection.« less

Coastal circulation and water-column properties in the War in the Pacific National Historical Park, Guam: measurements and modeling of waves, currents, temperature, salinity, and turbidity, April-August 2012

USGS Publications Warehouse

Storlazzi, Curt D.; Cheriton, Olivia M.; Lescinski, Jamie M.R.; Logan, Joshua B.

2014-01-01

The U.S. Geological Survey (USGS) Pacific Coastal and Marine Science Center (PCMSC) initiated an investigation in the National Park Service’s (NPS) War in the Pacific National Historical Park (WAPA) to provide baseline scientific information on coastal circulation and water-column properties along west-central Guam, focusing on WAPA’s Agat Unit, as it relates to the transport and settlement of coral larvae, fish, and other marine organisms. The oceanographic data and numerical circulation modeling results from this study demonstrate that circulation in Agat Bay was strongly driven by winds and waves at longer (>1 day) timescales and by the tides at shorter (<1 day) timescales; near-surface currents in deep water were primarily controlled by the winds, whereas currents on the shallow reef flats were dominated by wave-driven motions. Water-column properties exhibited strong seasonality coupled to the shift from the trade wind to the non-trade wind season. During the dry trade-wind season, waters were cooler and more saline. When the winds shifted to a more variable pattern, waters warmed and became less saline because of a combination of increased thermal insolation from lack of wind forcing and higher rainfall. Turbidity was relatively low in Agat Bay and was similar to levels measured elsewhere along west-central Guam. The numerical circulation modeling results provide insight into the potential paths of buoyant material released from a series of locations along west-central Guam under summer non-trade wind forcing conditions that characterize coral spawning events. This information may be useful in evaluating the potential zones of influence/impact resulting from transport by surface currents of material released from these select locations.

Abrupt stop of deep water turnover with lake warming: Drastic consequences for algal primary producers.

PubMed

Yankova, Yana; Neuenschwander, Stefan; Köster, Oliver; Posch, Thomas

2017-10-23

After strong fertilization in the 20 th century, many deep lakes in Central Europe are again nutrient poor due to long-lasting restoration (re-oligotrophication). In line with reduced phosphorus and nitrogen loadings, total organismic productivity decreased and lakes have now historically low nutrient and biomass concentrations. This caused speculations that restoration was overdone and intended fertilizations are needed to ensure ecological functionality. Here we show that recent re-oligotrophication processes indeed accelerated, however caused by lake warming. Rising air temperatures strengthen thermal stabilization of water columns which prevents thorough turnover (holomixis). Reduced mixis impedes down-welling of oxygen rich epilimnetic (surface) and up-welling of phosphorus and nitrogen rich hypolimnetic (deep) water. However, nutrient inputs are essential for algal spring blooms acting as boost for annual food web successions. We show that repeated lack (since 1977) and complete stop (since 2013) of holomixis caused drastic epilimnetic phosphorus depletions and an absence of phytoplankton spring blooms in Lake Zurich (Switzerland). By simulating holomixis in experiments, we could induce significant vernal algal blooms, confirming that there would be sufficient hypolimnetic phosphorus which presently accumulates due to reduced export. Thus, intended fertilizations are highly questionable, as hypolimnetic nutrients will become available during future natural or artificial turnovers.

Prokaryotic responses to hydrostatic pressure in the ocean--a review.

PubMed

Tamburini, Christian; Boutrif, Mehdi; Garel, Marc; Colwell, Rita R; Deming, Jody W

2013-05-01

Effects of hydrostatic pressure on pure cultures of prokaryotes have been studied extensively but impacts at the community level in the ocean are less well defined. Here we consider hydrostatic pressure effects on natural communities containing both unadapted (piezosensitive) prokaryotes originating from surface water and adapted (including piezophilic) prokaryotes from the deep sea. Results from experiments mimicking pressure changes experienced by particle-associated prokaryotes during their descent through the water column show that rates of degradation of organic matter (OM) by surface-originating microorganisms decrease with sinking. Analysis of a much larger data set shows that, under stratified conditions, deep-sea communities adapt to in situ conditions of high pressure, low temperature and low OM. Measurements made using decompressed samples and atmospheric pressure thus underestimate in situ activity. Exceptions leading to overestimates can be attributed to deep mixing events, large influxes of surface particles, or provision of excessive OM during experimentation. The sediment-water interface, where sinking particles accumulate, will be populated by a mixture of piezosensitive, piezotolerant and piezophilic prokaryotes, with piezophilic activity prevailing deeper within sediment. A schematic representation of how pressure shapes prokaryotic communities in the ocean is provided, allowing a reasonably accurate interpretation of the available activity measurements. © 2013 Society for Applied Microbiology and Blackwell Publishing Ltd.

Metaproteomics of aquatic microbial communities in a deep and stratified estuary.

PubMed

Colatriano, David; Ramachandran, Arthi; Yergeau, Etienne; Maranger, Roxane; Gélinas, Yves; Walsh, David A

2015-10-01

Here we harnessed the power of metaproteomics to assess the metabolic diversity and function of stratified aquatic microbial communities in the deep and expansive Lower St. Lawrence Estuary, located in eastern Canada. Vertical profiling of the microbial communities through the stratified water column revealed differences in metabolic lifestyles and in carbon and nitrogen processing pathways. In productive surface waters, we identified heterotrophic populations involved in the processing of high and low molecular weight organic matter from both terrestrial (e.g. cellulose and xylose) and marine (e.g. organic compatible osmolytes) sources. In the less productive deep waters, chemosynthetic production coupled to nitrification by MG-I Thaumarchaeota and Nitrospina appeared to be a dominant metabolic strategy. Similar to other studies of the coastal ocean, we identified methanol oxidation proteins originating from the common OM43 marine clade. However, we also identified a novel lineage of methanol-oxidizers specifically in the particle-rich bottom (i.e. nepheloid) layer. Membrane transport proteins assigned to the uncultivated MG-II Euryarchaeota were also specifically detected in the nepheloid layer. In total, these results revealed strong vertical structure of microbial taxa and metabolic activities, as well as the presence of specific "nepheloid" taxa that may contribute significantly to coastal ocean nutrient cycling. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Paleoceanographic Changes during the Past 95000 Years from the Indian Sector of the Southern Ocean

NASA Astrophysics Data System (ADS)

Manoj, M. C.; Meloth, T.; Mohan, R.

2012-12-01

High-resolution planktic/benthic foraminiferal stable isotope and mean sortable silt records in a sediment core (SK200/22a) from the sub-Antarctic regime of the Indian sector of Southern Ocean depict the variations in surface and deep water hydrography during the past 95,000 years. The δ18O records of shallow- and deep-dwelling planktonic foraminiferal species (Neogloboquadrina pachyderma, Globigerina bulloides and Globorotalia inflata), primarily reflects the changes in upper water column characteristics. The δ18O records revealed the presence of the Antarctic Cold Reversal and the timing of the variability in major surface warming events appears in phase with the Antarctic temperature variations at the millennial time scale. Comparison between the proxies of sea surface conditions like planktonic δ18O and productivity proxies like carbonate and biogenic opal content in the core indicate that millennial scale sea surface warming fluctuated with productivity. The marine isotopic stage (MIS) 1 and MIS2 are characterized by near constant variations in mean sortable silt values, negating any significant changes in the deep water flow during these periods. The MIS 3 - MIS 5 periods were characterized by a general increase in mean sortable silt value, suggesting a strengthening of bottom-current activity that triggered winnowing at these periods. This is supported by the low δ13C records of epibenthic Cibicidoides wuellerstorfi during the glacials and some parts of MIS3 and MIS 5, confirming older nutrient-rich and poorly ventilated southern sourced deep waters at these periods. The termination I is marked by decrease in flow speed and an increase in the C. wuellerstorfi δ13C values. Comparison of mean sortable silt and C. wuellerstorfi δ13C record with the Antarctic ice core records reveal that pulses of reduced bottom water flow of Circumpolar Deep Water/North Atlantic Deep Water are synchronous with the Antarctic warming events. The decreased flow speed during the Antarctic warm events may be due to the lower production rate of southern-sourced water or reduced density, leading to reduced geostrophic flow. During the cold phases of the Antarctic climate, enhanced southern westerly wind transport caused increased sea-ice export leading to increase in density of southern-sourced water.

STURM: Resuspension mesocosms with realistic bottom shear stress and water column turbulence for benthic-pelagic coupling studies: Design and Applications

NASA Astrophysics Data System (ADS)

Sanford, L. P.; Porter, E.; Porter, F. S.; Mason, R. P.

2016-02-01

Shear TUrbulence Resuspension Mesocosm (STURM) tanks, with high instantaneous bottom shear stress and realistic water column mixing in a single system, allow more realistic benthic-pelagic coupling studies that include sediment resuspension. The 1 m3 tanks can be programmed to produce tidal or episodic sediment resuspension over extended time periods (e.g. 4 weeks), over muddy sediments with or without infaunal organisms. The STURM tanks use a resuspension paddle that produces uniform bottom shear stress across the sediment surface while gently mixing a 1 m deep overlying water column. The STURM tanks can be programmed to different magnitudes, frequencies, and durations of bottom shear stress (and thus resuspension) with proportional water column turbulence levels over a wide range of mixing settings for benthic-pelagic coupling experiments. Over eight STURM calibration settings, turbulence intensity ranged from 0.55 to 4.52 cm s-1, energy dissipation rate from 0.0032 to 2.65 cm2 s-3, the average bottom shear stress from 0.0068 to 0.19 Pa, and the instantaneous bottom shear stress from 0.07 to 2.0 Pa. Mixing settings can be chosen as desired and/or varied over the experiment, based on the scientific question at hand. We have used the STURM tanks for four 4-week benthic-pelagic coupling ecosystem experiments with tidal resuspension with or without infaunal bivalves, for stepwise erosion experiments with and without infaunal bivalves, for experiments on oyster biodeposit resuspension, to mimic storms overlain on tidal resuspension, and for experiments on the effects of varying frequency and duration of resuspension on the release of sedimentary contaminants. The large size of the tanks allows water quality and particle measurements using standard oceanographic instrumentation. The realistic scale and complexity of the contained ecosystems has revealed indirect feedbacks and responses that are not observable in smaller, less complex experimental systems.

A note on the effect of wind waves on vertical mixing in Franks Tract, Sacramento-San Joaquin Delta, California, USA

USGS Publications Warehouse

Thompson, Janet K.; Jones, Nicole L.; Stephen G. Monismith,

2008-01-01

A one-dimensional numerical model that simulates the effects of whitecapping waves was used to investigate the importance of whitecapping waves to vertical mixing at a 3-meter-deep site in Franks Tract in the Sacramento-San Joaquin Delta over an 11-day period. Locally-generated waves of mean period approximately 2 s were generated under strong wind conditions; significant wave heights ranged from 0 to 0.3 m. A surface turbulent kinetic energy flux was used to model whitecapping waves during periods when wind speeds > 5 m s-1 (62% of observations). The surface was modeled as a wind stress log-layer for the remaining 38% of the observations. The model results demonstrated that under moderate wind conditions (5–8 m s-1 at 10 m above water level), and hence moderate wave heights, whitecapping waves provided the dominant source of turbulent kinetic energy to only the top 10% of the water column. Under stronger wind (> 8 m s-1), and hence larger wave conditions, whitecapping waves provided the dominant source of turbulent kinetic energy over a larger portion of the water column; however, this region extended to the bottom half of the water column for only 7% of the observation period. The model results indicated that phytoplankton concentrations close to the bed were unlikely to be affected by the whitecapping of waves, and that the formation of concentration boundary layers due to benthic grazing was unlikely to be disrupted by whitecapping waves. Furthermore, vertical mixing of suspended sediment was unlikely to be affected by whitecapping waves under the conditions experienced during the 11-day experiment. Instead, the bed stress provided by tidal currents was the dominant source of turbulent kinetic energy over the bottom half of the water column for the majority of the 11-day period.

On polarimetric radar signatures of deep convection for model evaluation: columns of specific differential phase observed during MC3E.

PubMed

van Lier-Walqui, Marcus; Fridlind, Ann M; Ackerman, Andrew S; Collis, Scott; Helmus, Jonathan; MacGorman, Donald R; North, Kirk; Kollias, Pavlos; Posselt, Derek J

2016-02-01

The representation of deep convection in general circulation models is in part informed by cloud-resolving models (CRMs) that function at higher spatial and temporal resolution; however, recent studies have shown that CRMs often fail at capturing the details of deep convection updrafts. With the goal of providing constraint on CRM simulation of deep convection updrafts, ground-based remote-sensing observations are analyzed and statistically correlated for four deep convection events observed during the Midlatitude Continental Convective Clouds Experiment (MC3E). Since positive values of specific differential phase ( K DP ) observed above the melting level are associated with deep convection updraft cells, so-called " K DP columns" are analyzed using two scanning polarimetric radars in Oklahoma: the National Weather Service Vance WSR-88D (KVNX) and the Department of Energy C-band Scanning Atmospheric Radiation Measurement (ARM) Precipitation Radar (C-SAPR). KVNX and C-SAPR K DP volumes and columns are then statistically correlated with vertical winds retrieved via multi-Doppler wind analysis, lightning flash activity derived from the Oklahoma Lightning Mapping Array, and KVNX differential reflectivity ( Z DR ). Results indicate strong correlations of K DP volume above the melting level with updraft mass flux, lightning flash activity, and intense rainfall. Analysis of K DP columns reveals signatures of changing updraft properties from one storm event to another as well as during event evolution. Comparison of Z DR to K DP shows commonalities in information content of each, as well as potential problems with Z DR associated with observational artifacts.

Observations of near-bottom currents in Bornholm Basin, Slupsk Furrow and Gdansk Deep

NASA Astrophysics Data System (ADS)

Bulczak, A. I.; Rak, D.; Schmidt, B.; Beldowski, J.

2016-06-01

Dense bottom currents are responsible for transport of the salty inflow waters from the North Sea driving ventilation and renewal of Baltic deep waters. This study characterises dense currents in three deep locations of the Baltic Proper: Bornholm Basin (BB), Gdansk Basin (GB) and Slupsk Furrow (SF). These locations are of fundamental importance for the transport and pollution associated with chemical munitions deposited in BB and GB after 2nd World War. Of further importance the sub-basins are situated along the pathway of dense inflowing water.Current velocities were measured in the majority of the water column during regular cruises of r/v Oceania and r/v Baltica in 2001-2012 (38 cruises) by 307 kHz vessel mounted (VM), downlooking ADCP. Additionally, the high-resolution CTD and oxygen profiles were collected. Three moorings measured current velocity profiles in SF and GB over the summer 2012. In addition, temperature, salinity, oxygen and turbidity were measured at about 1 m above the bottom in GB. The results showed that mean current speed across the Baltic Proper was around 12 cm s-1 and the stronger flow was characteristic to the regions located above the sills, in the Bornholm and Slupsk Channels, reaching on average about 20 cm s-1. The results suggest that these regions are important for the inflow of saline waters into the eastern Baltic and are the areas of intense vertical mixing. The VM ADCP observations indicate that the average near-bottom flow across the basin can reach 35±6 cm s-1. The mooring observations also showed similar near-bottom flow velocities. However, they showed that the increased speed of the near-bottom layer occurred frequently in SF and GB during short time periods lasting for about few to several days or 10-20% of time. The observations showed that the bottom mixed layer occupies at least 10% of the water column and the turbulent mixing induced by near-bottom currents is likely to produce sediment resuspension and transport within the layer in all three sub-basins. The turbidity measurements, performed for 5-month-long time period over the summer 2012 in GB show that increased sediment resuspension is associated with a faster near-bottom flow.

Seismic Imaging of Circumpolar Deep Water Exchange across the Shelf Break of the Antarctic Peninsula

NASA Astrophysics Data System (ADS)

Gunn, K.; White, N.; Larter, R. D.; Falder, M.; Caulfield, C. C. P.

2016-02-01

The western Antarctic Peninsula is an area of recent extreme atmospheric warming. In the adjacent ocean, there is particular interest in on-shelf movement of Circumpolar Deep Water as a possible link to changing climate by affecting ice shelf processes. Here, we investigate on-shelf intrusions using two-dimensional seismic imaging of the water column which has vertical and horizontal resolutions of 10 m. 8 seismic profiles were acquired in February 2015 using the RRS James Clark Ross. These profiles traverse the shelf break and cross two bathymetric features, the Marguerite and Biscoe troughs, which may play a role in water exchange processes. Seismic data were acquired using two Generator-Injector air guns fired every 10 s with a pressure of 2000 psi. Reflections were recorded on a 2.4 km streamer of 192 receivers spaced every 12.5 m. Observed reflections in the processed records are caused by rapid changes of temperature ( 80%) and salinity ( 20%), delineating water masses of different properties. 13 XCTDs and XBTs plus a 38 kHz echo-sounder profile were simultaneously acquired along seismic profiles and used for calibration. Preliminary results show the top of the Winter Water layer as a bright reflection at 50-120 m depth across the entire survey, corresponding to temperatures ≤ -1°C. Curved, discontinuous, eddy-like reflections, also seen on echo-sounder profiles, are attributed to modified Upper Circumpolar Deep Water with temperatures ≥ 1.34°C. A warm core eddy, 11 km long and 220 m high, is visible 2 km inland of the shelf break. Pure Upper Circumpolar Deep Water of temperatures ≥ 1.80°C is aligned with weak but discernible, lens-shaped reflections. Eddy-like structures and the overall reflective morphology yield useful insights into shelf exchange processes, suggestive of three potential mechanisms: (i) topography controlled flow; (ii) an 'ice-pump' mechanism; and (iii) mesoscale eddies.

Preliminary post-emplacement safety analysis of the subseabed disposal of high-level nuclear waste

NASA Astrophysics Data System (ADS)

Kaplan, M. F.; Koplik, C. M.; Klett, R. D.

1984-09-01

The radiological hazard from the disposal of high-level nuclear waste within the deep ocean sediments is evaluated, on a preliminary basis, for locations in the central North Pacific and in the northwestern Atlantic. Radio-nuclide transport in the sediment and water column and by marine organisms is considered. Peak doses to an individual are approximately five orders of magnitude below background levels for both sites. Sensitivity analyses for most aspects of the post-emplacement systems models are included.

Coast of California Storm and Tidal Waves Study. Southern California Coastal Processes Data Summary,

DTIC Science & Technology

1986-02-01

distribution of tracers injected on the beach. The suspended load was obtained from in situ measurements of the water column in the surf zone (Zampol and...wind waves. 3.2.2 Wave Climate There are relatively few in situ long-term measurements of the deep ocean (i.e. unaffected by the channel islands and...climate parameters and were not intended for that purpose. In the literature reviewed, the principal source of long-term in situ measurements is the

Deep, diverse and definitely different: unique attributes of the world's largest ecosystem

NASA Astrophysics Data System (ADS)

Ramirez-Llodra, E.; Brandt, A.; Danovaro, R.; Escobar, E.; German, C. R.; Levin, L. A.; Martinez Arbizu, P.; Menot, L.; Buhl-Mortensen, P.; Narayanaswamy, B. E.; Smith, C. R.; Tittensor, D. P.; Tyler, P. A.; Vanreusel, A.; Vecchione, M.

2010-04-01

The deep sea, the largest biome on Earth, has a series of characteristics that make this environment both distinct from other marine and land ecosystems and unique for the entire planet. This review describes these patterns and processes, from geological settings to biological processes, biodiversity and biogeographical patterns. It concludes with a brief discussion of current threats from anthropogenic activities to deep-sea habitats and their fauna. Investigations of deep-sea habitats and their fauna began in the late 19th Century. In the intervening years, technological developments and stimulating discoveries have promoted deep-sea research and changed our way of understanding life on the planet. Nevertheless, the deep sea is still mostly unknown and current discovery rates of both habitats and species remain high. The geological, physical and geochemical settings of the deep-sea floor and the water column form a series of different habitats with unique characteristics that support specific faunal communities. Since 1840, 27 new habitats/ecosystems have been discovered from the shelf break to the deep trenches and discoveries of new habitats are still happening in the early 21st Century. However, for most of these habitats, the global area covered is unknown or has been only very roughly estimated; an even smaller - indeed, minimal - proportion has actually been sampled and investigated. We currently perceive most of the deep-sea ecosystems as heterotrophic, depending ultimately on the flux on organic matter produced in the overlying surface ocean through photosynthesis. The resulting strong food limitation, thus, shapes deep-sea biota and communities, with exceptions only in reducing ecosystems such as inter alia hydrothermal vents or cold seeps, where chemoautolithotrophic bacteria play the role of primary producers fuelled by chemical energy sources rather than sunlight. Other ecosystems, such as seamounts, canyons or cold-water corals have an increased productivity through specific physical processes, such as topographic modification of currents and enhanced transport of particles and detrital matter. Because of its unique abiotic attributes, the deep sea hosts a specialized fauna. Although there are no phyla unique to deep waters, at lower taxonomic levels the composition of the fauna is distinct from that found in the upper ocean. Amongst other characteristic patterns, deep-sea species may exhibit either gigantism or dwarfism, related to the decrease in food availability with depth. Food limitation on the seafloor and water column is also reflected in the trophic structure of deep-sea communities, which are adapted to low energy availability. In most of the heterotrophic deep-sea settings, the dominant megafauna is composed of detritivores, while filter feeders are abundant in habitats with hard substrata (e.g. mid-ocean ridges, seamounts, canyon walls and coral reefs) and chemoautotrophy through symbiotic relationships is dominant in reducing habitats. Deep-sea biodiversity is among of the highest on the planet, mainly composed of macro and meiofauna, with high evenness. This is true for most of the continental margins and abyssal plains with hot spots of diversity such as seamounts or cold-water corals. However, in some ecosystems with particularly "extreme" physicochemical processes (e.g. hydrothermal vents), biodiversity is low but abundance and biomass are high and the communities are dominated by a few species. Two large-scale diversity patterns have been discussed for deep-sea benthic communities. First, a unimodal relationship between diversity and depth is observed, with a peak at intermediate depths (2000-3000 m), although this is not universal and particular abiotic processes can modify the trend. Secondly, a poleward trend of decreasing diversity has been discussed, but this remains controversial and studies with larger and more robust datasets are needed. Because of the paucity in our knowledge of habitat coverage and species composition, biogeographic studies are mostly based on regional data or on specific taxonomic groups. Recently, global biogeographic provinces for the pelagic and benthic deep ocean have been described, using environmental and, where data were available, taxonomic information. This classification described 30 pelagic provinces and 38 benthic provinces divided into 4 depth ranges, as well as 10 hydrothermal vent provinces. One of the major issues faced by deep-sea biodiversity and biogeographical studies is related to the high number of species new to science that are collected regularly, together with the slow description rates for these new species. Taxonomic coordination at the global scale is particularly difficult but is essential if we are to analyse large diversity and biogeographic trends. Because of their remoteness, anthropogenic impacts on deep-sea ecosystems have not been addressed very thoroughly until recently. The depletion of biological and mineral resources on land and in shallow waters, coupled with technological developments, is promoting the increased interest in services provided by deep-water resources. Although often largely unknown, evidence for the effects of human activities in deep-water ecosystems - such as deep-sea mining, hydrocarbon exploration and exploitation, fishing, dumping and littering - is already accumulating. Because of our limited knowledge of deep-sea biodiversity and ecosystem functioning and because of the specific life-history adaptations of many deep-sea species (e.g. slow growth and delayed maturity), it is essential that the scientific community works closely with industry, conservation organisations and policy makers to develop conservation and management options.

Reactive iron and manganese in estuarine sediments of the Baltic Sea: Impacts of flocculation and redox shuttling

NASA Astrophysics Data System (ADS)

Jilbert, Tom; Tiihonen, Rosa; Myllykangas, Jukka-Pekka; Asmala, Eero; Hietanen, Susanna

2016-04-01

Iron (Fe) and manganese (Mn) play important roles in sedimentary carbon cycling in both freshwater and marine systems. Dissimilatory reduction of Fe and Mn oxides is known to be a major pathway of suboxic organic matter remineralization in surface sediments, while recent studies have shown that Fe and Mn oxides may be involved in the anaerobic oxidation of methane deeper in the sediment column (e.g., Egger et al., 2015). Estuaries are transitional environments, characterized by gradients of salinity and redox conditions which impact on the mobility of Fe and Mn. In turn, the distribution of Fe and Mn in estuarine sediments, and the role of the two metals in carbon cycling, is expected to be spatially heterogeneous. However, few studies have attempted to describe the sedimentary distribution of Fe and Mn in the context of processes occurring in the estuarine water column. In particular, salinity-driven flocculation and redox shuttling are two key processes whose relative impacts on sedimentary Fe and Mn have not been clearly demonstrated. In this study we investigated the coupled water column and sedimentary cycling of Fe and Mn along a 60km non-tidal estuarine transect in the Gulf of Finland, Baltic Sea. We show that riverine Fe entering the estuary as colloidal oxides associated with dissolved organic matter (DOM) is quickly flocculated and sedimented within 5 km of the river mouth, despite the shallow lateral salinity gradient. Sediments within this range are enriched in Fe (up to twice the regional average), principally in the form of crystalline Fe oxides as determined by sequential extractions. The high crystallinity implies relative maturity of the oxide mineralogy, likely due to sustained oxic conditions and long residence time in the river catchment. Despite the reducing conditions below the sediment-water interface, Fe is largely retained in the sediments close to the river mouth. In contrast, sedimentary Mn concentrations are highest in a deep silled basin more than 10km downstream. Throughout the estuary, Mn oxides are reductively dissolved shallower in the sediment column than Fe oxides, resulting in strong effluxes of dissolved Mn from the sediments. Subsequent oxidation of bottom water dissolved Mn to particulate oxides and lateral transport ("redox shuttling") account for the sedimentary Mn enrichments in the deep silled basin. Porewater data suggest that the heterogeneity of Fe and Mn availability in the estuarine sediments may influence the relative importance of the two metals for anaerobic oxidation of methane. Egger, M. et al., Environmental Science and Technology 49(1), 277-283, 2015.

Water column distribution and carbon isotopic signal of cholesterol, brassicasterol and particulate organic carbon in the Atlantic sector of the Southern Ocean

NASA Astrophysics Data System (ADS)

Cavagna, A.-J.; Dehairs, F.; Bouillon, S.; Woule-Ebongué, V.; Planchon, F.; Delille, B.; Bouloubassi, I.

2013-04-01

The combination of concentrations and δ13C signatures of Particulate Organic Carbon (POC) and sterols provides a powerful approach to study ecological and environmental changes in both the modern and ancient ocean. We applied this tool to study the biogeochemical changes in the modern ocean water column during the BONUS-GoodHope survey (February-March 2008) from Cape Basin to the northern part of the Weddell Gyre. Cholesterol and brassicasterol were chosen as ideal biomarkers of the heterotrophic and autotrophic carbon pools, respectively, because of their ubiquitous and relatively refractory nature. We document depth distributions of concentrations (relative to bulk POC) and δ13C signatures of cholesterol and brassicasterol combined with CO2 aq. surface concentration variation. While the relationship between CO2 aq. and δ13C of bulk POC and biomarkers have been reported by others for the surface water, our data show that this persists in mesopelagic and deep waters, suggesting that δ13C signatures of certain biomarkers in the water column could be applied as proxies for surface water CO2 aq. We observed a general increase in sterol δ13C signatures with depth, which is likely related to a combination of particle size effects, selective feeding on larger cells by zooplankton, and growth rate related effects. Our data suggest a key role of zooplankton fecal aggregates in carbon export for this part of the Southern Ocean (SO). Additionally, in the southern part of the transect south of the Polar Front (PF), the release of sea-ice algae during the ice demise in the Seasonal Ice Zone (SIZ) is hypothesized to influence the isotopic signature of sterols in the open ocean. Overall, the combined use of δ13C values and concentrations measurements of both bulk organic C and specific sterols throughout the water column offers the promising potential to explore the recent history of plankton and the fate of organic matter in the SO.

Effects of local climate and hydrological conditions on the thermal regime of a reservoir at Tropic of Cancer, in southern China.

PubMed

Wang, Sheng; Qian, Xin; Han, Bo-Ping; Luo, Lian-Cong; Hamilton, David P

2012-05-15

Thermal regime is strongly associated with hydrodynamics in water, and it plays an important role in the dynamics of water quality and ecosystem succession of stratified reservoirs. Changes in both climate and hydrological conditions can modify thermal regimes. Liuxihe Reservoir (23°45'50″N; 113°46'52″E) is a large, stratified and deep reservoir in Guangdong Province, located at the Tropic of Cancer of southern China. The reservoir is a warm monomictic water body with a long period of summer stratification and a short period of mixing in winter. The vertical distribution of suspended particulate material and nutrients are influenced strongly by the thermal structure and the associated flow fields. The hypolimnion becomes anoxic in the stratified period, increasing the release of nutrients from the bottom sediments. Fifty-one years of climate and reservoir operational observations are used here to show the marked changes in local climate and reservoir operational schemes. The data show increasing air temperature and more violent oscillations in inflow volumes in the last decade, while the inter-annual water level fluctuations tend to be more moderate. To quantify the effects of changes in climate and hydrological conditions on thermal structure, we used a numerical simulation model to create scenarios incorporating different air temperatures, inflow volumes, and water levels. The simulations indicate that water column stability, the duration of the mixing period, and surface and outflow temperatures are influenced by both natural factors and by anthropogenic factors such as climate change and reservoir operation schemes. Under continuous warming and more stable storage in recent years, the simulations indicate greater water column stability and increased duration of stratification, while irregular large discharge events may reduce stability and lead to early mixing in autumn. Our results strongly suggest that more attention should be focused on water quality in years of extreme climate variation and hydrological conditions, and selective withdrawal of deep water may provide an efficient means to reduce internal loading in warm years. Copyright © 2012 Elsevier Ltd. All rights reserved.

1300-m-high rising bubbles from mud volcanoes at 2080 m in the Black Sea: Hydroacoustic characteristics and temporal variability

NASA Astrophysics Data System (ADS)

Greinert, Jens; Artemov, Yuriy; Egorov, Viktor; De Batist, Marc; McGinnis, Daniel

2006-04-01

A mud volcano area in the deep waters (> 2000 m) of the Black Sea was studied by hydroacoustic measurements during several cruises between January 2002 and June 2004. Gas bubbles in the water column give strong backscatter signals and thus can be detected even in great water depths by echosounders as the 38 kHz EK500 scientific split-beam system that was used during the surveys. Because of their shape in echograms and to differentiate against geochemical plumes and real upwelling bubble-water plumes, we call these hydroacoustic manifestations of bubbles in the water column 'flares'. Digital recording and processing of the data allows a 3D visualization and data comparison over the entire observation period, without artefacts caused by changing system settings. During our surveys, we discovered bubble release from three separate mud volcanoes, Dvurechenskiy (DMV), Vodianitskiy (VMV) and the Nameless Seep Site (NSS), in about 2080 m water depth simultaneously. Bubble release was observed between 9 June 2003 and 5 June 2004. The most frequently surveyed, DMV, was found to be inactive during very intensive studies in January 2002. The first activity was observed on 27 June 2002, which finally ceased between 5 and 15 June 2004 after a period of continuously decreasing activity. This observed 2-yr bubble-release period at a mud volcano may give an indication for the duration of active periods. The absence of short-term variations (within days or hours) may indicate that the bubble release from the observed mud volcanoes does not undergo rapid changes. The recorded echograms show that bubbles rise about 1300 m high through the water column, to a final water depth of about 770 m, which is ˜75 m below the phase boundary of pure methane hydrate in the Black Sea. With a release depth from 2068 m and a detected rise height of 1300 m, the flare at VMV is among the deepest and highest reported so far, and gives evidence of highly extended bubble life times (up to 108 min) in deep marine environments. To better understand how a methane bubble (gas analyses of the pore water and gas hydrate gave 99.4% methane) can rise so high without dissolving, we applied a recently developed bubble dissolution model that takes into account a decreased mass transfer due to an immediately formed gas-hydrate rim. Using the hydroacoustically determined bubble rising speeds (19-22 cm/s at the bottom; 12-14 cm/s at the flare top) and the relation between the rising speed of 'dirty'/gas hydrate rimmed bubbles and the bubble size, we could validate that a gas-hydrate-rimmed bubble with a diameter of 9 mm could survive the 1300-m-rise through the water column, before it is finally dissolved. A diameter of about 9 mm is reasonable for bubbles released at seep sites and the coincidence between the observed bubble rising speed and the model approach of a 9-mm bubble supports the assumption of gas-hydrate-rimmed bubbles.

A major change in North Atlantic deep water circulation 1.6 million years ago

NASA Astrophysics Data System (ADS)

Khélifi, N.; Frank, M.

2014-07-01

The global ocean-climate system has been highly sensitive to the formation and advection of deep overflow water from the Nordic Seas as integral part of the Atlantic Meridional Overturning Circulation (AMOC) but its evolution over the Pliocene-Pleistocene global cooling is not fully understood. In particular, changes in the sources and mixing of prevailing deep waters that were involved in driving overturning throughout the Pliocene-Pleistocene climate transitions are not well constrained. Here we investigate the evolution of a substantial deep southward return overflow of the AMOC over the last 4 million years. We present new records of the bottom-water radiogenic neodymium isotope (ϵNd) variability obtained from three sediment cores (DSDP site 610 and ODP sites 980/981 and 900) at water depths between 2170 and 5050 m in the northeast Atlantic. We find that prior to the onset of major Northern Hemisphere glaciation (NHG) ∼3 million years ago (Ma), ϵNd values primarily oscillated between -9 and -11 at all sites, consistent with enhanced vertical mixing and weak stratification of the water masses during the warmer-than-today Pliocene period. From 2.7 Ma to ∼2.0 Ma, the ϵNd signatures of the water masses gradually became more distinct, which documents a significant advection of Nordic Seas overflow deep water coincident with the intensification of NHG. Most markedly, however, at ∼1.6 Ma the interglacial ϵNd signatures at sites 610 (2420 m water depth (w.d.)) and 980/981 (2170 m w.d.) synchronously and permanently shifted by 2 to 3 ϵNd units to less radiogenic values, respectively. Since then the difference between glacial and interglacial ϵNd values has been similar to the Late Quaternary at each site. A decrease of ∼2ϵNd units at 1.6 Ma was also recorded for the deepest water masses by site 900 (∼5050 m w.d.), which thereafter, however, evolved to more radiogenic values again until the present. This major ϵNd change across the 1.6 Ma transition reflects a significant reorganization of the overturning circulation in the northeast Atlantic paving the way for the more stratified water column with distinct water masses prevailing thereafter.

Deep, diverse and definitely different: unique attributes of the world's largest ecosystem

NASA Astrophysics Data System (ADS)

Ramirez-Llodra, E.; Brandt, A.; Danovaro, R.; de Mol, B.; Escobar, E.; German, C. R.; Levin, L. A.; Martinez Arbizu, P.; Menot, L.; Buhl-Mortensen, P.; Narayanaswamy, B. E.; Smith, C. R.; Tittensor, D. P.; Tyler, P. A.; Vanreusel, A.; Vecchione, M.

2010-09-01

The deep sea, the largest biome on Earth, has a series of characteristics that make this environment both distinct from other marine and land ecosystems and unique for the entire planet. This review describes these patterns and processes, from geological settings to biological processes, biodiversity and biogeographical patterns. It concludes with a brief discussion of current threats from anthropogenic activities to deep-sea habitats and their fauna. Investigations of deep-sea habitats and their fauna began in the late 19th century. In the intervening years, technological developments and stimulating discoveries have promoted deep-sea research and changed our way of understanding life on the planet. Nevertheless, the deep sea is still mostly unknown and current discovery rates of both habitats and species remain high. The geological, physical and geochemical settings of the deep-sea floor and the water column form a series of different habitats with unique characteristics that support specific faunal communities. Since 1840, 28 new habitats/ecosystems have been discovered from the shelf break to the deep trenches and discoveries of new habitats are still happening in the early 21st century. However, for most of these habitats the global area covered is unknown or has been only very roughly estimated; an even smaller - indeed, minimal - proportion has actually been sampled and investigated. We currently perceive most of the deep-sea ecosystems as heterotrophic, depending ultimately on the flux on organic matter produced in the overlying surface ocean through photosynthesis. The resulting strong food limitation thus shapes deep-sea biota and communities, with exceptions only in reducing ecosystems such as inter alia hydrothermal vents or cold seeps. Here, chemoautolithotrophic bacteria play the role of primary producers fuelled by chemical energy sources rather than sunlight. Other ecosystems, such as seamounts, canyons or cold-water corals have an increased productivity through specific physical processes, such as topographic modification of currents and enhanced transport of particles and detrital matter. Because of its unique abiotic attributes, the deep sea hosts a specialized fauna. Although there are no phyla unique to deep waters, at lower taxonomic levels the composition of the fauna is distinct from that found in the upper ocean. Amongst other characteristic patterns, deep-sea species may exhibit either gigantism or dwarfism, related to the decrease in food availability with depth. Food limitation on the seafloor and water column is also reflected in the trophic structure of heterotrophic deep-sea communities, which are adapted to low energy availability. In most of these heterotrophic habitats, the dominant megafauna is composed of detritivores, while filter feeders are abundant in habitats with hard substrata (e.g. mid-ocean ridges, seamounts, canyon walls and coral reefs). Chemoautotrophy through symbiotic relationships is dominant in reducing habitats. Deep-sea biodiversity is among of the highest on the planet, mainly composed of macro and meiofauna, with high evenness. This is true for most of the continental margins and abyssal plains with hot spots of diversity such as seamounts or cold-water corals. However, in some ecosystems with particularly "extreme" physicochemical processes (e.g. hydrothermal vents), biodiversity is low but abundance and biomass are high and the communities are dominated by a few species. Two large-scale diversity patterns have been discussed for deep-sea benthic communities. First, a unimodal relationship between diversity and depth is observed, with a peak at intermediate depths (2000-3000 m), although this is not universal and particular abiotic processes can modify the trend. Secondly, a poleward trend of decreasing diversity has been discussed, but this remains controversial and studies with larger and more robust data sets are needed. Because of the paucity in our knowledge of habitat coverage and species composition, biogeographic studies are mostly based on regional data or on specific taxonomic groups. Recently, global biogeographic provinces for the pelagic and benthic deep ocean have been described, using environmental and, where data were available, taxonomic information. This classification described 30 pelagic provinces and 38 benthic provinces divided into 4 depth ranges, as well as 10 hydrothermal vent provinces. One of the major issues faced by deep-sea biodiversity and biogeographical studies is related to the high number of species new to science that are collected regularly, together with the slow description rates for these new species. Taxonomic coordination at the global scale is particularly difficult, but is essential if we are to analyse large diversity and biogeographic trends.

The natural diet of a hexactinellid sponge: Benthic pelagic coupling in a deep-sea microbial food web

NASA Astrophysics Data System (ADS)

Pile, Adele J.; Young, Craig M.

2006-07-01

Dense communities of shallow-water suspension feeders are known to sidestep the microbial loop by grazing on ultraplankton at its base. We quantified the diet, rates of water processing, and abundance of the deep-sea hexactinellid sponge Sericolophus hawaiicus, and found that, like their demosponge relatives in shallow water, hexactinellids are a significant sink for ultraplankton. S. hawaiicus forms a dense bed of sponges on the Big Island of Hawaii between 360 and 460 m depth, with a mean density of 4.7 sponges m -2. Grazing of S. hawaiicus on ultraplankton was quantified from in situ samples using flow cytometry, and was found to be unselective. Rates of water processing were determined with dye visualization and ranged from 1.62 to 3.57 cm s -1, resulting in a processing rate of 7.9±2.4 ml sponge -1 s -1. The large amount of water processed by these benthic suspension feeders results in the transfer of approximately 55 mg carbon and 7.3 mg N d -1 m -2 from the water column to the benthos. The magnitude of this flux places S. hawaiicus squarely within the functional group of organisms that link the pelagic microbial food web to the benthos.

210Pb in the western Indian Ocean: distribution, disequilibrium, and partitioning between dissolved and particulate phases

NASA Astrophysics Data System (ADS)

Chung, Y.

1987-09-01

Dissolved 210Pb profiles are presented for 13 GEOSECS stations in the western Indian Ocean. In surface water away from high southern latitudes, 210Pb is in excess over 226Ra due to the atmospheric fallout from decay of 222Rn. Except in the Circumpolar region, the dissolved 210Pb profiles display a gentle mid-depth maximum similar to the corresponding 226Ra profiles. The 210Pb/ 226Ra activity ratio ranges from 1.6 in the surface water east of Madagascar to 0.4 or less in the bottom water of all the basins. The lowest ratio observed was 0.1 in the Gulf of Aden very close to the continental land mass. A ratio of 0.6 divides the western Indian Ocean horizontally into two portions, with the contour at shallower depth in the north than in the south. The deep water disequilibrium is thus more extensive north of Madagascar than south of it. It appears that locality and bottom topography play a strong role in controlling the distributions of 210Pb and 226Ra as well as their extent of disequilibrium in the water column. The mean residence time for Pb with respect to particulate and boundary scavenging in the deep water ranges from about 15 to 75 years.

Arctic Deep Water Ferromanganese-Oxide Deposits Reflect the Unique Characteristics of the Arctic Ocean

NASA Astrophysics Data System (ADS)

Hein, James R.; Konstantinova, Natalia; Mikesell, Mariah; Mizell, Kira; Fitzsimmons, Jessica N.; Lam, Phoebe J.; Jensen, Laramie T.; Xiang, Yang; Gartman, Amy; Cherkashov, Georgy; Hutchinson, Deborah R.; Till, Claire P.

2017-11-01

Little is known about marine mineral deposits in the Arctic Ocean, an ocean dominated by continental shelf and basins semi-closed to deep-water circulation. Here, we present data for ferromanganese crusts and nodules collected from the Amerasia Arctic Ocean in 2008, 2009, and 2012 (HLY0805, HLY0905, and HLY1202). We determined mineral and chemical compositions of the crusts and nodules and the onset of their formation. Water column samples from the GEOTRACES program were analyzed for dissolved and particulate scandium concentrations, an element uniquely enriched in these deposits. The Arctic crusts and nodules are characterized by unique mineral and chemical compositions with atypically high growth rates, detrital contents, Fe/Mn ratios, and low Si/Al ratios, compared to deposits found elsewhere. High detritus reflects erosion of submarine outcrops and North America and Siberia cratons, transport by rivers and glaciers to the sea, and distribution by sea ice, brines, and currents. Uniquely high Fe/Mn ratios are attributed to expansive continental shelves, where diagenetic cycling releases Fe to bottom waters, and density flows transport shelf bottom water to the open Arctic Ocean. Low Mn contents reflect the lack of a mid-water oxygen minimum zone that would act as a reservoir for dissolved Mn. The potential host phases and sources for elements with uniquely high contents are discussed with an emphasis on scandium. Scandium sorption onto Fe oxyhydroxides and Sc-rich detritus account for atypically high scandium contents. The opening of Fram Strait in the Miocene and ventilation of the deep basins initiated Fe-Mn crust growth ˜15 Myr ago.

Arctic deep-water ferromanganese-oxide deposits reflect the unique characteristics of the Arctic Ocean

USGS Publications Warehouse

Hein, James; Konstantinova, Natalia; Mikesell, Mariah; Mizell, Kira; Fitzsimmons, Jessica N.; Lam, Phoebe; Jensen, Laramie T.; Xiang, Yang; Gartman, Amy; Cherkashov, Georgy; Hutchinson, Deborah; Till, Claire P.

2017-01-01

Little is known about marine mineral deposits in the Arctic Ocean, an ocean dominated by continental shelf and basins semi-closed to deep-water circulation. Here, we present data for ferromanganese crusts and nodules collected from the Amerasia Arctic Ocean in 2008, 2009, and 2012 (HLY0805, HLY0905, HLY1202). We determined mineral and chemical compositions of the crusts and nodules and the onset of their formation. Water column samples from the GEOTRACES program were analyzed for dissolved and particulate scandium concentrations, an element uniquely enriched in these deposits.The Arctic crusts and nodules are characterized by unique mineral and chemical compositions with atypically high growth rates, detrital contents, Fe/Mn ratios, and low Si/Al ratios, compared to deposits found elsewhere. High detritus reflects erosion of submarine outcrops and North America and Siberia cratons, transport by rivers and glaciers to the sea, and distribution by sea ice, brines, and currents. Uniquely high Fe/Mn ratios are attributed to expansive continental shelves, where diagenetic cycling releases Fe to bottom waters, and density flows transport shelf bottom water to the open Arctic Ocean. Low Mn contents reflect the lack of a mid-water oxygen minimum zone that would act as a reservoir for dissolved Mn. The potential host phases and sources for elements with uniquely high contents are discussed with an emphasis on scandium. Scandium sorption onto Fe oxyhydroxides and Sc-rich detritus account for atypically high scandium contents. The opening of Fram Strait in the Miocene and ventilation of the deep basins initiated Fe-Mn crust growth ∼15 Myr ago.

The CARIACO Ocean Time-Series: two decades of oceanographic observations to understand linkages between biogeochemistry, ecology, and long-term environmental variability.

NASA Astrophysics Data System (ADS)

Lorenzoni, L.; Muller-Karger, F. E.; Rueda-Roa, D. T.; Thunell, R.; Scranton, M. I.; Taylor, G. T.; benitez-Nelson, C. R.; Montes, E.; Astor, Y. M.; Rojas, J.

2016-02-01

The CARIACO Ocean Time-Series project, located in the Cariaco Basin off the coast of Venezuela, seeks to understand relationships between hydrography, primary production, community composition, microbial activity, particle fluxes, and element cycling in the water column, and how variations in these processes are preserved in sediments accumulating in this anoxic basin. CARIACO uses autonomous and shipboard measurements to understand ecological and biogeochemical changes and how these relate to regional and global climatic/ocean variability. CARIACO is a model for national ocean observing programs in Central/South America, and has been developed as a community facility platform with open access to all data (http://imars.marine.usf.edu/cariaco). Research resulting from this program has contributed to knowledge about the decomposition and cycling of particles, the biological pump, and to our understanding of the ecology and oceanography of oxygen minimum zones. Despite this basin being anoxic below 250m, remineralization rates of organic matter are comparable to those in well oxygenated waters. A dynamic microbial community significantly influences carbon and nutrient biogeochemical cycling throughout the water column. Since 1995, declining particulate organic carbon fluxes have been measured throughout the water column using sediment traps, likely in response to declining Chl-a concentrations and smaller phytoplankton which have replaced the larger taxa over the past decade. This community shift appears to be caused by regional changes in the physical regime. CARIACO also recorded marked long-term changes in surface and deep DIC in response to a combination of factors including surface water warming. The observations of CARIACO highlight the importance of a sustained, holistic approach to studying biodiversity, ecology and the marine carbon cycle to predict potential impacts of climate change on the ocean's ecosystem services and carbon sequestration efficiency.

Pore water phosphate and ammonia below the permanent halocline in the south-eastern Baltic Sea and their benthic fluxes under anoxic conditions

NASA Astrophysics Data System (ADS)

Graca, Bożena; Witek, Zbigniew; Burska, Dorota; Białkowska, Izabela; Łukawska-Matuszewska, Katarzyna; Bolałek, Jerzy

2006-12-01

In this paper the results of a study on the distribution of pore water phosphates and ammonia, and their fluxes under anoxic condition in a deep (> 70 m) accumulation-type bottom of the south-eastern Baltic Sea, namely in the Gdańsk Deep and the adjacent areas, are presented. All measurements were taken during the growth period, i.e. in September 2000, April 2001 and June 2002. Benthic phosphate and ammonia fluxes were estimated using Fick's First Law. Phosphate and ammonia concentrations ranged from 7.5 to 266.3 μmol dm - 3 and from 53.6 to 1248.3 μmol dm - 3 , respectively. The values recorded in the central part of the Gdańsk Deep were lower than those found both on its slopes and on the SW slope of the Gotland Deep. The lowest phosphate contents were typical of the Oblique Sill which separates the Gdańsk and Gotland Deeps. In 1993-2002, as a result of anoxia the sediments in the Gdańsk Deep released about 5.1 × 10 3 t P and 22.8 × 10 3 t N. These loads supplied on average 1.5% and 0.9% of phytoplankton's demand for P and N, respectively. In comparison to the total external load of nutrients discharged to the Gulf of Gdańsk (i.e. 8.79 × 10 3 t year - 1 P tot and 130.79 × 10 3 t year - 1 N tot; [Witek, Z., Humborg, Ch., Savchuk, O., Grelowski, A. and Łysiak-Pastuszak, E., 2003. Nitrogen and phosphorus budgets of the Gulf of Gdańsk (Baltic Sea). Est. Coast. Shelf Sci., 57:239-248.]), the return flux of P and N from the anoxic sediments to the water column in the Gdańsk Deep was a minor source of these elements.

Study on Vortex-Induced Motions of A New Type of Deep Draft Multi-Columns FDPSO

NASA Astrophysics Data System (ADS)

Gu, Jia-yang; Xie, Yu-lin; Zhao, Yuan; Li, Wen-juan; Tao, Yan-wu; Huang, Xiang-hong

2018-03-01

A numerical simulation and an experimental study on vortex-induced motion (VIM) of a new type of deep draft multi-columns floating drilling production, storage and offloading (FDPSO) are presented in this paper. The main dimension, the special variable cross-section column and the cabin arrangement of the octagonal pontoon are introduced based on the result. The numerical simulation is adapted to study the effects of current incidence angles and reduced velocities on this platform's sway motion response. The 300 m water depth equivalent truncated mooring system is adopted for the model tests. The model tests are carried out to check the reliability of numerical simulation. The results consist of surge, sway and yaw motions, as well as motion trajectories. The maximum sway amplitudes for different types of offshore platform is also studied. The main results show that the peak frequencies of sway motion under different current incidence angles and reduced velocities vary around the natural frequency. The analysis result of flow field indicates that the change of distribution of vortex in vertical presents significant influences on the VIM of platform. The trend of sway amplitude ratio curve of this new type FDPSO differs from the other types of platform. Under 45° current incidence angle, the sway amplitude of this new type of FDPSO is much smaller than those of other types of offshore platform at 4.4 ≤ V r ≤ 8.9. The typical `8' shape trajectory does not appear in the platform's motion trajectories.

Microbial diversity from chlorophyll maximum, oxygen minimum and bottom zones in the southwestern Atlantic Ocean

NASA Astrophysics Data System (ADS)

Medina-Silva, Renata; de Oliveira, Rafael R.; Pivel, Maria A. G.; Borges, Luiz G. A.; Simão, Taiz L. L.; Pereira, Leandro M.; Trindade, Fernanda J.; Augustin, Adolpho H.; Valdez, Fernanda P.; Eizirik, Eduardo; Utz, Laura R. P.; Groposo, Claudia; Miller, Dennis J.; Viana, Adriano R.; Ketzer, João M. M.; Giongo, Adriana

2018-02-01

Conspicuous physicochemical vertical stratification in the deep sea is one of the main forces driving microbial diversity in the oceans. Oxygen and sunlight availability are key factors promoting microbial diversity throughout the water column. Ocean currents also play a major role in the physicochemical stratification, carrying oxygen down to deeper zones as well as moving deeper water masses up towards shallower depths. Water samples within a 50-km radius in a pockmark location of the southwestern Atlantic Ocean were collected and the prokaryotic communities from different water depths - chlorophyll maximum, oxygen minimum and deep-sea bottom (down to 1355 m) - were described. At phylum level, Proteobacteria were the most frequent in all water depths, Cyanobacteria were statistically more frequent in chlorophyll maximum zone, while Thaumarchaeota were significantly more abundant in both oxygen minimum and bottom waters. The most frequent microorganism in the chlorophyll maximum and oxygen minimum zones was a Pelagibacteraceae operational taxonomic unit (OTU). At the bottom, the most abundant genus was the archaeon Nitrosopumilus. Beta diversity analysis of the 16S rRNA gene sequencing data uncovered in this study shows high spatial heterogeneity among water zones communities. Our data brings important contribution for the characterisation of oceanic microbial diversity, as it consists of the first description of prokaryotic communities occurring in different oceanic water zones in the southwestern Atlantic Ocean.

Spatial and seasonal changes in optical properties of autochthonous and allochthonous chromophoric dissolved organic matter in a stratified mountain lake.

PubMed

Bracchini, Luca; Dattilo, Arduino Massimo; Hull, Vincent; Loiselle, Steven Arthur; Nannicini, Luciano; Picchi, Maria Pia; Ricci, Maso; Santinelli, Chiara; Seritti, Alfredo; Tognazzi, Antonio; Rossi, Claudio

2010-03-01

In this study, we present results on seasonal and spatial changes in CDOM absorption and fluorescence (fCDOM) in a deep mountain lake (Salto Lake, Italy). A novel approach was used to describe the shape of CDOM absorption between 250-700 nm (distribution of the spectral slope, S(lambda)) and a new fluorescence ratio is used to distinguish between humic and amino acid-like components. Solar ultraviolet irradiance, dissolved organic carbon (DOC), DOM fluorescence and absorption measurements were analysed and compared to other physicochemical parameters. We show that in the UV-exposed mixed layer: (i) fluorescence by autochthonous amino acid-like CDOM, (ii) values of S(lambda) across UV-C and UV-B wavebands increased during the summer months, whereas (i) average molar absorption coefficient and (ii) fluorescence by allochthonous humic CDOM decreased. In the unexposed deep layer of the water column (and in the entire water column in winter), humic-like CDOM presented high values of molar absorption coefficients and low values of S(lambda). UV attenuation coefficients correlated with both chlorophyll a concentrations and CDOM absorption. In agreement with changes in CDOM, minimal values in UV attenuation were found in summer. The S(lambda) curve was used as a signature of the mixture between photobleached and algal-derived CDOM with respect to the unexposed chromophoric dissolved compounds in this thermal stratified lake. Furthermore, S(lambda) curves were useful to distinguish between low and high molecular weight CDOM.

Subsurface North Atlantic warming as a trigger of rapid cooling events: evidences from the Early Pleistocene (MIS 31-19)

NASA Astrophysics Data System (ADS)

Hernández-Almeida, I.; Sierro, F.-J.; Cacho, I.; Flores, J.-A.

2014-10-01

Subsurface water column dynamics in the subpolar North Atlantic were reconstructed in order to improve the understanding of the cause of abrupt IRD events during cold periods of the Early Pleistocene. We used Mg / Ca-based temperatures of deep-dwelling (Neogloboquadrina pachyderma sinistral) planktonic foraminifera and paired Mg / Ca-δ18O measurements to estimate the subsurface temperatures and δ18O of seawater at Site U1314. Carbon isotopes on benthic and planktonic foraminifera from the same site provide information about the ventilation and water column nutrient gradient. Mg / Ca-based temperatures and δ18O of seawater suggest increased temperatures and salinities during ice-rafting, likely due to enhanced northward subsurface transport of subtropical waters during periods of AMOC reduction. Planktonic carbon isotopes support this suggestion, showing coincident increased subsurface ventilation during deposition of ice-rafted detritus (IRD). Warm waters accumulated at subsurface would result in basal warming and break-up of ice-shelves, leading to massive iceberg discharges in the North Atlantic. Release of heat and salt stored at subsurface would help to restart the AMOC. This mechanism is in agreement with modelling and proxy studies that observe a subsurface warming in the North Atlantic in response to AMOC slowdown during the MIS3.

Paleoenvironmental events during the last 13,000 years in the central Red Sea as recorded by pteropoda

NASA Astrophysics Data System (ADS)

Almogi-Labin, Ahuva; Hemleben, Christoph; Meischner, Dieter; Erlenkeuser, Helmut

1991-02-01

A high-resolution record was obtained by investigating a sedimentary sequence from two cores taken in the central Red Sea (R/V Meteor cruise 5, leg 2). The numerical variations between nonmigratory and migratory pteropods and their stable isotopic record were studied together with variations in the carbonate and total organic carbon content in order to estimate changes in the structure of the water column during the last 13 kyr. The results indicate the existence of a highly stratified water column during deglaciation and early Holocene (13-8.5 ka). During this period the depth of the mixed layer varied between less than 50-100 m at most, and productivity was markedly reduced in comparison to the recent situation. The intermediate and deep water were constantly highly depleted in oxygen. A pronounced Younger Dryas event was recognized at 10.4 ka which coincides with an arid phase on the border land. The oxygenation of the intermediate water improved remarkably after 7.5 ka and peaked during the period between 4.6 and 2.0 ka. During this period the mixed layer reached its present depth and the productivity which was maximal during middle Holocene attained present level during the last 4.6 kyr.

DOE Office of Scientific and Technical Information (OSTI.GOV)

MacIntyre, H.L.; Geider, R.J.; McKay, R.M.

Net phytoplankton (>20 {mu}m) comprised 51 {plus_minus} 9% of the total chlorophyll (Chl) in a Skeletonema costatum-dominated spring bloom in Delaware Bay. The net phytoplankton had low C:N and high protein:carbohydrate ratios, indicating that their growth was nutrient-replete. Their photosynthetic responses were characterized by low specific absorption, low light-limited and light-saturated rates of photosynthesis, and high quantum yields, indicative of acclimation to low irradiance and internal self-shading. High fucoxanthin: Chl ratios also indicated low light acclimation, but high photoprotective xanthophyll: Chl ratios suggested a high capacity for photoprotective energy dissipation. Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) could be activated and deactivated in responsemore » to changes in irradiance and was fully activated at the surface of the water column and fully deactivated in aphotic deep water. Maximum Rubisco activity was correlated with Rubisco content and bulk protein content of the phytoplankton and with light-saturated rates of photosynthesis measured in short (<20-min) incubations. Long (60-min) incubations caused a decrease in the light-saturated rate of photosynthesis, possibly because of feedback limitation. While feedback limitation is unlikely to occur in the water column it should be considered when estimating productivity in well-mixed waters from fixed light-depth incubations. 90 refs., 7 figs., 2 tabs.« less

Methyl mercury distributions in relation to the presence of nano- and picophytoplankton in an oceanic water column (Ligurian Sea, North-western Mediterranean)

NASA Astrophysics Data System (ADS)

Heimbürger, Lars-Eric; Cossa, Daniel; Marty, Jean-Claude; Migon, Christophe; Averty, Bernard; Dufour, Aurélie; Ras, Josephine

2010-10-01

Recent findings on the distribution of methylated mercury (MeHg T) in waters have highlighted the importance of organic carbon remineralization on the production of these compounds in the open ocean. Here, we present the first time-series (20 monthly samplings between July 2007 and May 2009) of high-resolution vertical profiles (10-12 depths in a 2350 m water column) of MeHg T distributions in an open ocean environment, the Ligurian Sea (North-western Mediterranean Sea). Concentrations varied within the sub-picomolar range (general mean: 0.30 ± 0.17 pmol L -1, n = 214) with the lowest values at the surface, increasing with depth up to the oxygen minimum zone, and decreasing slowly at greater depth. Concentrations in the surface waters never exceeded 0.15 pmol L -1, while the highest concentrations (up to 0.82 pmol L -1) were associated to the hypoxycline during the autumn bloom. A detailed vertical MeHg T profile reveals a "double-peak" pattern, coincidental with the two microbial layers described by Tanaka and Rassoulzadegan (2002), the so-called "microbial food web" in the euphotic zone (<100 m) and the "microbial loop" in the aphotic zone (>100 m). Temporal variations in the MeHg T abundance and distribution in the water column were linked to seasonality. The highest MeHg T concentrations were found in the oxygen minimum zone during the period of stratification, and coincide with the greatest abundance of nano- and picophytoplankton (cyanobacteria, nanoflagellates, etc.) in the euphotic layer. None of our deep MeHg T measurements (˜100 m above the sea bottom) revealed a significant sedimentary source of MeHg T. We explored the correlation between MeHg T concentrations and the apparent oxygen utilization, a proxy of organic matter remineralization, over the study period. Results of this study strengthen the hypothesis that net mercury methylation in the open ocean occurs in the water column, is linked to organic matter regeneration, and is promoted by the presence of small-sized nano- and picophytoplankton, that dominate under oligotrophic conditions.

To what extent can specialized species succeed in the deep sea? The biology and trophic ecology of deep-sea spiny eels (Notacanthidae) in the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Romeu, Oriol Rodríguez; Cartes, Joan E.; Solé, Montse; Carrassón, Maite

2016-09-01

The population structure, reproductive biology and feeding ecology of the two notacanthids inhabiting the deep Mediterranean, Notacanthus bonapartei and Polyacanthonotus rissoanus, were analyzed in the Balearic Basin at depths from 579 to 2233 m (mainly pristine depths or subjected to low fishing impact), including seasonal variations. Preferred average depths (Centres of Gravity, CoG) of Notacanthusbonapartei were situated over the middle slope (942 m) and of P. rissoanus on the lower slope (1680 m). For both species, bigger individuals collected at the deepest depths had the highest values of a gonadosomatic index (GSI), suggesting that in reproductive periods adults migrate into deeper waters. The reproductive season for N. bonapartei was late summer and autumn; that of P. rissoanus was narrower, restricted to summer. N. bonapartei exploited benthic prey, among identified prey mainly echinoderms (e.g., Penilpidia ludwigi, Hymenodiscus coronata) and sessile benthic organisms (e.g., actinians and polyps of the bamboo coral Isidella elongata). Consumption of bamboo coral polyps by N. bonapartei constitutes a unique specialized trophic strategy and a direct link with such corals. Some differences in the diet composition related to depth were observed, as were a few differences related to periods of water-column stratification and homogenization. Gut fullness (F) of this species was mainly correlated with surface Chlorophyll a recorded 2-3 months before sampling date and somewhat but less so with river discharges 1 month before sampling. That suggests that vertical flux of organic matter was the food source for prey exploited by N. bonapartei. Diet of P. rissoanus was based on epibenthic-suprabenthic crustaceans, e.g. tanaids (Apseudes spp.), isopods (Munnopsurus atlanticus) and amphipods (Rhachotropis caeca) and on polychaetes (Polynoidae, Harmothoe spp.), all these prey more mobile than consumed by N. bonapartei. No significant differences in diet composition were found related with either depth or homogenization/stratification of the water column. This lack of changes in diet is probably attributable to the greater stability of the lower slope where P. rissoanus lives. Gut fullness was mainly correlated with surface Chlorophyll a recorded simultaneously with the fish sampling. Lactate dehydrogenase (LDH) activity was similar in the muscle of the two notacanthids (N. bonapartei=3.72-8.75 μmol/min/mg prot; P. rissoanus=7.56 μmol/min/mg prot). Values for N. bonapartei were the highest found compared to other deep-sea fish in the deep Mediterranean. This could be related with the special feeding behaviour of this species when it removes sessile prey from substrate.

Hydrogen in rocks: an energy source for deep microbial communities

NASA Technical Reports Server (NTRS)

Freund, Friedemann; Dickinson, J. Thomas; Cash, Michele

2002-01-01

To survive in deep subsurface environments, lithotrophic microbial communities require a sustainable energy source such as hydrogen. Though H2 can be produced when water reacts with fresh mineral surfaces and oxidizes ferrous iron, this reaction is unreliable since it depends upon the exposure of fresh rock surfaces via the episodic opening of cracks and fissures. A more reliable and potentially more voluminous H2 source exists in nominally anhydrous minerals of igneous and metamorphic rocks. Our experimental results indicate that H2 molecules can be derived from small amounts of H2O dissolved in minerals in the form of hydroxyl, OH- or O3Si-OH, whenever such minerals crystallized in an H2O-laden environment. Two types of experiments were conducted. Single crystal fracture experiments indicated that hydroxyl pairs undergo an in situ redox conversion to H2 molecules plus peroxy links, O3Si/OO\\SiO3. While the peroxy links become part of the mineral structure, the H2 molecules diffused out of the freshly fractured mineral surfaces. If such a mechanism occurred in natural settings, the entire rock column would become a volume source of H2. Crushing experiments to facilitate the outdiffusion of H2 were conducted with common crustal igneous rocks such as granite, andesite, and labradorite. At least 70 nmol of H2/g diffused out of coarsely crushed andesite, equivalent at standard pressure and temperature to 5,000 cm3 of H2/m3 of rock. In the water-saturated, biologically relevant upper portion of the rock column, the diffusion of H2 out of the minerals will be buffered by H2 saturation of the intergranular water film.

Biogeochemical Implications of Recent Changes in the Ventilation of the Japan/East Sea

NASA Astrophysics Data System (ADS)

Jenkins, W. J.

2006-12-01

The Japan/East Sea (JES) is a highly productive marine ecosystem that constitutes an important fisheries resource for a number of nations. As a weakly stratified marginal sea separated from the Pacific Ocean by shallow straits, the ventilation of the abyssal JES is remarkably susceptible to climate change. Not surprisingly, such changes have indeed been noted for the late-glacial and Holocene. Over the past half-century or more, there has been a trend toward increasing deep water temperatures, increasing dissolved inorganic nutrients, and decreasing dissolved oxygen levels that are consistent with a reduction in deep ventilation in recent decades. I present a minimum complexity model of the Japan Sea that utilize observations of the transient tracers CFCs, tritium, and 3He to place useful constraints on the character, magnitude, and timing of these changes. I describe these changes within the context of differing mechanisms for deep water formation and ventilation. The converse of ventilation is the return of deep nutrients to the surface ocean, which in turn forms the basis of the food pyramid, and hence the support for new primary production in this strategically important marginal sea. The tracer constrained model calculations suggest that the primary (convective) supply of inorganic nitrogen to the shallow JES reduced by nearly a factor of two (from 1.7 to 0.9 Tmoles) in the latter half of the 20^th century. I relate the changes in abyssal nutrient reflux to climatic modulation of water mass formation changes, and present the implications for water column remineralization processes. The implications of the large scale changes for the sustenance of fishery stocks is significant.

Archean deep-water depositional system: interbedded and banded iron formation and clastic turbidites in the Barberton Greenstone Belt, South Africa

NASA Astrophysics Data System (ADS)

Zentner, Danielle; Lowe, Donald

2013-04-01

The 3.23 billion year old sediments in the Barberton greenstone belt, South Africa include some of the world's oldest known deep-water deposits. Unique to this locality are turbidites interbedded with banded iron formation (BIF) and banded ferruginous chert (BFC). This unusual association may provide clues for reconstructing Archean deep-water depositional settings. For our study we examined freshly drilled core in addition to measuring ~500 m of outcrop exposures along road cuts. The stacking pattern follows an overall BIF to BFC to amalgamated turbidite succession, although isolated turbidites do occur throughout the sequence. The turbidites are predominately massive, and capped with thin, normally graded tops that include mud rip-ups, chert plates, and ripples. The lack of internal stratification and the amalgamated character suggests emplacement by surging high-density turbidity currents. Large scours and channels are absent and bedding is tabular: the flows were collapsing with little turbulence reaching the bed. In contrast, field evidence indicates the BIF and BFC most likely precipitated directly out of the water column. Preliminary interpretations indicate the deposits may be related to a pro-deltaic setting. (1) Deltaic systems can generate long-lived, high volume turbidity currents. (2) The contacts between the BIF, BFC, and turbidite successions are gradual and inter-fingered, possibly representing lateral facies relationships similar to modern pro-delta environments. (3) Putative fan delta facies, including amalgamated sandstone and conglomerate, exist stratigraphically updip of the basinal sediments.

Patterns in bacterial and archaeal community structure and diversity in western Beaufort Sea sediments and waters

NASA Astrophysics Data System (ADS)

Hamdan, L. J.; Sikaroodi, M.; Coffin, R. B.; Gillevet, P. M.

2010-12-01

A culture-independent phylogenetic study of microbial communities in water samples and sediment cores recovered from the Beaufort Sea slope east of Point Barrow, Alaska was conducted. The goal of the work was to describe community composition in sediment and water samples and determine the influence of local environmental conditions on microbial populations. Archaeal and bacterial community composition was studied using length heterogeneity-polymerase chain reaction (LH-PCR) and multitag pyrosequencing (MTPS). Sediment samples were obtained from three piston cores on the slope (~1000m depth) arrayed along an east-west transect and one core from a depth of approximately 2000m. Discrete water samples were obtained using a CTD-rosette from three locations adjacent to piston core sites. Water sample were selected at three discrete depths within a vertically stratified (density) water column. The microbial community in near surface waters was distinct from the community observed in deeper stratified layers of the water column. Multidimensional scaling analysis (MDS) revealed that water samples from mid and deep stratified layers bore high similarity to communities in cores collected in close proximity. Overall, the highest diversity (bacteria and archaea) was observed in a core which had elevated methane concentration relative to other locations. Geochemical (e.g., bulk organic and inorganic carbon pools, nutrients, metabolites) and physical data (e.g. depth, water content) were used to reveal the abiotic factors structuring microbial communities. The analysis indicates that sediment water content (porosity) and inorganic carbon concentration are the most significant structuring elements on Beaufort shelf sedimentary microbial communities.

Historical And Modern Deep-Sea Transmissometry Data In World Ocean Database - Its Status, Challenges, And Utilization.

NASA Astrophysics Data System (ADS)

Mishonov, A. V.; Richardson, M. J.; Gardner, W. D.; Boyer, T.

2016-12-01

The World Ocean Database (WOD) contains over 13 million profiles of major oceanographic variables (T, S, etc.) with new data added continually, and is available without restriction. A subset of more than 24000 profiles include data from deep-sea transmissometers (Tr), instruments that measure the attenuation of a beam of red light (c) over a fixed path length (typically 25cm). Full water column Tr data collected along with standard hydrographic data can be applied to a variety of important scientific questions, e.g., why and how does primary production biomass change in the euphotic zone on decadal time scales? can sources of natural bottom nepheloid layers of resuspended sediment be differentiated from `industrial' sources due from future deep-sea mining? what is the role of resuspended sediment in the biogeochemical cycles of trace elements in the deep sea? Tr measurements were made over the past four decades during 550 cruises throughout all the world's ocean basins. We present a synopsis of these optical data collected during international, global programs such as the WOCE, JGOFS, and CLIVAR. Some of the transects were repeated two-three times over 10-15 years, purposely to allow an assessment of the variability of hydrographic conditions on decadal time scales. The optical measurements (c due to water and particles) throughout the entire water column made over recent decades along with the hydrographic data allow us to understand how optical conditions might be affected by climate change. Tr data have also been collected in many regional programs, e.g. SAVE in the late 1980's, and AMT beginning in the mid-1990's and continuing to today. Tr data held in WOD has been acquired using different instruments by different research teams and this brings some challenges to data post-processing and comparison. The majority of data now in WOD has been post-processed by our team, but incomplete metadata and methodology documentation have added to the difficulty of mining the historical data. New data collected by ongoing programs such as CLIVAR and GEOTRACES are being post-processed and coming to WOD on a regular basis. We encourage others who are making hydrographic measurements to include Tr measurements and submit data to WOD along with complete metadata / methodology to maximize the use of these valuable measurements.

Can neap-spring tidal cycles modulate biogeochemical fluxes in the abyssal near-seafloor water column?

NASA Astrophysics Data System (ADS)

Turnewitsch, Robert; Dale, Andrew; Lahajnar, Niko; Lampitt, Richard S.; Sakamoto, Kei

2017-05-01

Before particulate matter that settles as 'primary flux' from the interior ocean is deposited into deep-sea sediments it has to traverse the benthic boundary layer (BBL) that is likely to cover almost all parts of the seafloor in the deep seas. Fluid dynamics in the BBL differ vastly from fluid dynamics in the overlying water column and, consequently, have the potential to lead to quantitative and compositional changes between primary and depositional fluxes. Despite this potential and the likely global relevance very little is known about mechanistic and quantitative aspects of the controlling processes. Here, results are presented for a sediment-trap time-series study that was conducted on the Porcupine Abyssal Plain in the abyssal Northeast Atlantic, with traps deployed at 2, 40 and 569 m above bottom (mab). The two bottommost traps were situated within the BBL-affected part of the water column. The time series captured 3 neap and 4 spring tides and the arrival of fresh settling material originating from a surface-ocean bloom. In the trap-collected material, total particulate matter (TPM), particulate inorganic carbon (PIC), biogenic silica (BSi), particulate organic carbon (POC), particulate nitrogen (PN), total hydrolysable amino acids (AA), hexosamines (HA) and lithogenic material (LM) were determined. The biogeochemical results are presented within the context of time series of measured currents (at 15 mab) and turbidity (at 1 mab). The main outcome is evidence for an effect of neap/spring tidal oscillations on particulate-matter dynamics in BBL-affected waters in the deep sea. Based on the frequency-decomposed current measurements and numerical modelling of BBL fluid dynamics, it is concluded that the neap/spring tidal oscillations of particulate-matter dynamics are less likely due to temporally varying total free-stream current speeds and more likely due to temporally and vertically varying turbulence intensities that result from the temporally varying interplay of different rotational flow components (residual, tidal, near-inertial) within the BBL. Using information from previously published empirical and theoretical relations between fluid and biogeochemical dynamics at the scale of individual particle aggregates, a conceptual and semi-quantitative picture of a mechanism was derived that explains how the neap/spring fluid-dynamic oscillations may translate through particle dynamics into neap/spring oscillations of biogeochemical aggregate decomposition (microbially driven organic-matter breakdown, biomineral dissolution). It is predicted that, during transitions from neap into spring tides, increased aggregation in near-seafloor waters and/or reduced deposition of aggregates at the seafloor coincides with reduced biogeochemical particulate-matter decomposition in near-seafloor waters. By contrast, during transitions from spring into neap tides, enhanced biogeochemical particulate-matter decomposition in near-seafloor waters is predicted to coincide with increased deposition of particulate matter at the seafloor. This study suggests that, in addition to current speed, the specifics and subtleties of the interplay of different rotational flow components can be an important control on how the primary flux from the interior ocean is translated into the depositional flux, with potential implications for sedimentary carbon deposition, benthic food supply and possibly even the sedimentary records of environmental change.

Conservation of deep pelagic biodiversity.

PubMed

Robison, Bruce H

2009-08-01

The deep ocean is home to the largest ecosystems on our planet. This vast realm contains what may be the greatest number of animal species, the greatest biomass, and the greatest number of individual organisms in the living world. Humans have explored the deep ocean for about 150 years, and most of what is known is based on studies of the deep seafloor. In contrast, the water column above the deep seabed comprises more than 90% of the living space, yet less than 1% of this biome has been explored. The deep pelagic biota is the largest and least-known major faunal group on Earth despite its obvious importance at the global scale. Pelagic species represent an incomparable reservoir of biodiversity. Although we have yet to discover and describe the majority of these species, the threats to their continued existence are numerous and growing. Conserving deep pelagic biodiversity is a problem of global proportions that has never been addressed comprehensively. The potential effects of these threats include the extensive restructuring of entire ecosystems, changes in the geographical ranges of many species, large-scale elimination of taxa, and a decline in biodiversity at all scales. This review provides an initial framework of threat assessment for confronting the challenge of conserving deep pelagic biodiversity; and it outlines the need for baseline surveys and protected areas as preliminary policy goals.

Investigating the ocean generated acoustic/seismic wavefields in NE Atlantic

NASA Astrophysics Data System (ADS)

Le Pape, F.; Bean, C. J.; Craig, D.; Jousset, P.; Donne, S. E.; Möllhoff, M.

2017-12-01

In this study, we look at the comparison of 3D simulations of acoustic and seismic waves propagation with OBS data recorded across the shelf offshore Ireland and out into the Rockall Trough. Real and synthetic observations are combined to characterize both acoustic and seismic wavefields in the marine environment and particularly study secondary microseisms propagation from deep to shallow water to the land. Whereas the recorded OBS data show a strong change in the energy of "noise events" in the primary microseism band from the shelf to the land, the secondary microseism band is associated with stronger signal in the deep water compared to the shelf area. Furthermore, the data also highlight seasonal variations in the seismic and acoustic wavefields likely related to changes in noise source locations. The 3D simulations of acoustic and seismic waves propagation in the Rockall Trough look promising to reconcile deep ocean, shelf and land seismic observations as well as the effect of the water column and sediments thickness on "seismic ambient noise" generation and propagation. For instance, the simulations reveal interesting results on the acoustic/seismic coupling and its implication on the secondary microseisms source origin. This project is part of the Irish Centre for Research in Applied Geoscience (ICRAG), funded under the SFI Research Centres Programme and is co-funded under the European Regional Development Fund.

Steady state fractionation of heavy noble gas isotopes in a deep unsaturated zone

USGS Publications Warehouse

Seltzer, Alan M.; Severinghaus, Jeffrey P.; Andraski, Brian J.; Stonestrom, David A.

2017-01-01

To explore steady state fractionation processes in the unsaturated zone (UZ), we measured argon, krypton, and xenon isotope ratios throughout a ∼110 m deep UZ at the United States Geological Survey (USGS) Amargosa Desert Research Site (ADRS) in Nevada, USA. Prior work has suggested that gravitational settling should create a nearly linear increase in heavy-to-light isotope ratios toward the bottom of stagnant air columns in porous media. Our high-precision measurements revealed a binary mixture between (1) expected steady state isotopic compositions and (2) unfractionated atmospheric air. We hypothesize that the presence of an unsealed pipe connecting the surface to the water table allowed for direct inflow of surface air in response to extensive UZ gas sampling prior to our first (2015) measurements. Observed isotopic resettling in deep UZ samples collected a year later, after sealing the pipe, supports this interpretation. Data and modeling each suggest that the strong influence of gravitational settling and weaker influences of thermal diffusion and fluxes of CO2 and water vapor accurately describe steady state isotopic fractionation of argon, krypton, and xenon within the UZ. The data confirm that heavy noble gas isotopes are sensitive indicators of UZ depth. Based on this finding, we outline a potential inverse approach to quantify past water table depths from noble gas isotope measurements in paleogroundwater, after accounting for fractionation during dissolution of UZ air and bubbles.

Biodiversity's big wet secret: the global distribution of marine biological records reveals chronic under-exploration of the deep pelagic ocean.

PubMed

Webb, Thomas J; Vanden Berghe, Edward; O'Dor, Ron

2010-08-02

Understanding the distribution of marine biodiversity is a crucial first step towards the effective and sustainable management of marine ecosystems. Recent efforts to collate location records from marine surveys enable us to assemble a global picture of recorded marine biodiversity. They also effectively highlight gaps in our knowledge of particular marine regions. In particular, the deep pelagic ocean--the largest biome on Earth--is chronically under-represented in global databases of marine biodiversity. We use data from the Ocean Biogeographic Information System to plot the position in the water column of ca 7 million records of marine species occurrences. Records from relatively shallow waters dominate this global picture of recorded marine biodiversity. In addition, standardising the number of records from regions of the ocean differing in depth reveals that regardless of ocean depth, most records come either from surface waters or the sea bed. Midwater biodiversity is drastically under-represented. The deep pelagic ocean is the largest habitat by volume on Earth, yet it remains biodiversity's big wet secret, as it is hugely under-represented in global databases of marine biological records. Given both its value in the provision of a range of ecosystem services, and its vulnerability to threats including overfishing and climate change, there is a pressing need to increase our knowledge of Earth's largest ecosystem.

The Presence and Characterization of Antarctic Bottom Water Located Between the Mid-Atlantic Ridge and the Rio Grande Rise

NASA Astrophysics Data System (ADS)

Miller, R. H.; Reece, R.; Estep, J.; Christeson, G. L.; Acquisto, T. M.

2016-12-01

Circumpolar waters of widely varying properties enter South Atlantic Ocean circulation, interleaving their properties. Antarctic bottom water (ABW) flows northward into the South Atlantic at the eastern edge of the South American continent and around the Rio Grande Rise (RGR), a large aseismic ocean ridge in the deep water off the coast of Brazil. The majority of ABW transport occurs below depths of 3500 m, so very little is lost at the top of the RGR. In early 2016, the CREST (Crustal Reflectivity Experiment Southern Transect) expedition acquired multichannel seismic (MCS) and ocean bottom seismometer (OBS) datasets along a crustal segment in the South Atlantic, stretching from the Mid Atlantic Ridge (MAR) west to the RGR. During OBS recovery, a communications problem occurred in which the OBS received the transducer pulse from the ship, but the ship did not receive the OBS return pulse. The nine shallowest instruments, closest to the MAR, did not experience this problem, but all remaining instruments did. All instruments were extensively tested in the water column and in the lab and exhibited no malfunctions. We hypothesize that a deepwater layer of differing physical properties, located nearer the OBS than the boat, dispersed the return pulse resulting in the break in communications. ABW is a good candidate for a potential cold deepwater body in this region. We will examine multi-beam bathymetry returns and seismic reflection data for indications of reflections in the deepwater column. If observations support the presence of cold deepwater, we will fully characterize its properties and boundaries and determine if the characteristics match that of ABW. This study will characterize the behavior and nature of potential cold deepwater currents east of the Rio Grande Rise in an attempt to verify the presence of ABW. Information regarding the effects of differential water layering on acoustic communication with seafloor instruments could benefit future deployments to affected regions. Additionally, more insight into deep water ocean circulation could provide critical information for modeling with implications for chemical and heat exchange as well as ocean-climate interaction.

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota: Pore Water DOM composition in a peat bog

DOE PAGES

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.; ...

2018-01-29

Here, we characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur, and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and excitation-emission matrix parallel factor analysis components within the peat column. In particular, the intermediate depth zone (~ 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputsmore » from surface vegetation. The intermediate depth zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively, these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Lastly, our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table, redox oscillation, and pore water advection.« less

Vertical Stratification of Peat Pore Water Dissolved Organic Matter Composition in a Peat Bog in Northern Minnesota: Pore Water DOM composition in a peat bog

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Wilson, Rachel M.; Cooper, William T.

Here, we characterized dissolved organic matter (DOM) composition throughout the peat column at the Marcell S1 forested bog in northern Minnesota and tested the hypothesis that redox oscillations associated with cycles of wetting and drying at the surface of the fluctuating water table correlate with increased carbon, sulfur, and nitrogen turn over. We found significant vertical stratification of DOM molecular composition and excitation-emission matrix parallel factor analysis components within the peat column. In particular, the intermediate depth zone (~ 50 cm) was identified as a zone where maximum decomposition and turnover is taking place. Surface DOM was dominated by inputsmore » from surface vegetation. The intermediate depth zone was an area of high organic matter reactivity and increased microbial activity with diagenetic formation of many unique compounds, among them polycyclic aromatic compounds that contain both nitrogen and sulfur heteroatoms. These compounds have been previously observed in coal-derived compounds and were assumed to be responsible for coal's biological activity. Biological processes triggered by redox oscillations taking place at the intermediate depth zone of the peat profile at the S1 bog are assumed to be responsible for the formation of these heteroatomic PACs in this system. Alternatively, these compounds could stem from black carbon and nitrogen derived from fires that have occurred at the site in the past. Surface and deep DOM exhibited more similar characteristics, compared to the intermediate depth zone, with the deep layer exhibiting greater input of microbially degraded organic matter than the surface suggesting that the entire peat profile consists of similar parent material at different degrees of decomposition and that lateral and vertical advection of pore water from the surface to the deeper horizons is responsible for such similarities. Lastly, our findings suggest that molecular composition of DOM in peatland pore water is dynamic and is a function of ecosystem activity, water table, redox oscillation, and pore water advection.« less

The hydrography of the Mozambique Channel from six years of continuous temperature, salinity, and velocity observations

NASA Astrophysics Data System (ADS)

Ullgren, J. E.; van Aken, H. M.; Ridderinkhof, H.; de Ruijter, W. P. M.

2012-11-01

Temperature, salinity and velocity data are presented, along with the estimated volume transport, from seven full-length deep sea moorings placed across the narrowest part of the Mozambique Channel, southwest Indian Ocean, during the period November 2003 to December 2009. The dominant water mass in the upper layer is Sub-Tropical Surface Water (STSW) which overlies South Indian Central Water (SICW), and is normally capped by fresher Tropical Surface Water (TSW). Upper ocean salinity increased through 2005 as a result of saline STSW taking up a relatively larger part of the upper layer, at the expense of TSW. Upper waters are on average warmer and lighter in the central Channel than on the sides. Throughout the upper 1.5 km of the water column there is large hydrographic variability, short-term as well as interannual, and in particular at frequencies (four to seven cycles per year) associated with the southward passage of anticyclonic Mozambique Channel eddies. The eddies have a strong T-S signal, in the upper and central waters as well as on the intermediate level, as the eddies usually carry saline Red Sea Water (RSW) in their core. While the interannual frequency band displays an east-west gradient with higher temperature variance on the western side, the eddy frequency band shows highest variance in the centre of the Channel, where the eddy band contains about 40% of the total isopycnal hydrographic variability. Throughout the >6 years of measurements, the frequency and characteristics of eddies vary between periods, both in terms of strength and vertical structure of eddy T-S signals. These changes contribute to the interannual variability of water mass properties: an increase in central water salinity to a maximum in late 2007 coincided with a period of unusually frequent eddies with strong salinity signals. The warmest and most saline deep water is found within the northward flowing Mozambique Undercurrent, on the western side of the Channel. The Undercurrent has two cores: an intermediate one mainly containing diluted Antarctic Intermediate Water (AAIW), and a deep one consisting of North Atlantic Deep Water (NADW). In the intermediate core, T-S properties are strongly correlated with current velocity, probably because of the strong salinity gradient at the interface between Red Sea Water (RSW) and AAIW. In the deep core, velocity and hydrographic time series do not correlate on a daily basis, but they do at longer time scales.

Constraints on Cumulus Parameterization from Simulations of Observed MJO Events

NASA Technical Reports Server (NTRS)

Del Genio, Anthony; Wu, Jingbo; Wolf, Audrey B.; Chen, Yonghua; Yao, Mao-Sung; Kim, Daehyun

2015-01-01

Two recent activities offer an opportunity to test general circulation model (GCM) convection and its interaction with large-scale dynamics for observed Madden-Julian oscillation (MJO) events. This study evaluates the sensitivity of the Goddard Institute for Space Studies (GISS) GCM to entrainment, rain evaporation, downdrafts, and cold pools. Single Column Model versions that restrict weakly entraining convection produce the most realistic dependence of convection depth on column water vapor (CWV) during the Atmospheric Radiation Measurement MJO Investigation Experiment at Gan Island. Differences among models are primarily at intermediate CWV where the transition from shallow to deeper convection occurs. GCM 20-day hindcasts during the Year of Tropical Convection that best capture the shallow–deep transition also produce strong MJOs, with significant predictability compared to Tropical Rainfall Measuring Mission data. The dry anomaly east of the disturbance on hindcast day 1 is a good predictor of MJO onset and evolution. Initial CWV there is near the shallow–deep transition point, implicating premature onset of deep convection as a predictor of a poor MJO simulation. Convection weakly moistens the dry region in good MJO simulations in the first week; weakening of large-scale subsidence over this time may also affect MJO onset. Longwave radiation anomalies are weakest in the worst model version, consistent with previous analyses of cloud/moisture greenhouse enhancement as the primary MJO energy source. The authors’ results suggest that both cloud-/moisture-radiative interactions and convection–moisture sensitivity are required to produce a successful MJO simulation.

How fast is the Patagonian shelf-break acidifying?

NASA Astrophysics Data System (ADS)

Orselli, Iole B. M.; Kerr, Rodrigo; Ito, Rosane G.; Tavano, Virginia M.; Mendes, Carlos Rafael B.; Garcia, Carlos A. E.

2018-02-01

Anthropogenic carbon (Cant) concentration is determined according to the TrOCA method, from carbonate system data and hydrographic parameters collected during two consecutive spring cruises (2007 and 2008) in the Argentinean Patagonian shelf-break zone between 36°S and 50°S. Cant has intruded the water column until intermediate depths, with no Cant below 1000 m, in the deeper waters (i.e., North Atlantic Deep Water and Antarctic Bottom Water) of the Northern sector of the study area (i.e., North of 38°S). The higher Cant concentration is observed in Subantarctic Shelf Water in the Southern region, whereas in the Northern sector both Tropical Water and South Atlantic Central Water are equally affected by Cant intrusion. The Antarctic Intermediate Water represents the depth-limit achieved by Cant penetration, reinforcing the role that this water mass plays as an important vehicle to transport Cant to the oceans interior. The estimated Cant average (± method precision) is 46.6 ± 5.3 μmol kg- 1, considering the full depth of the water column. The ocean acidification state (ΔpH) shows an average (± standard deviation) of - 0.11 ± 0.05, thus, indicating an annual pH reduction of - 0.0010 yr- 1 since the Industrial Revolution (c.a. 1750). The degree of aragonite saturation is lowered towards undersaturation levels of calcite. The Patagonian shelf and shelf-break zones-a strong CO2 sink region in the global ocean-are likely a key area for Cant intrusion in the southwestern South Atlantic Ocean.

The Deepwater Horizon Oil Spill: Ecogenomics of the Deep-Sea Plume

NASA Astrophysics Data System (ADS)

Hazen, T. C.

2012-12-01

The explosion on April 20, 2010 at the BP-leased Deepwater Horizon drilling rig in the Gulf of Mexico off the coast of Louisiana, resulted in oil and gas rising to the surface and the oil coming ashore in many parts of the Gulf, it also resulted in the dispersment of an immense oil plume 4,000 feet below the surface of the water. Despite spanning more than 600 feet in the water column and extending more than 10 miles from the wellhead, the dispersed oil plume was gone within weeks after the wellhead was capped - degraded and diluted to undetectable levels. Furthermore, this degradation took place without significant oxygen depletion. Ecogenomics enabled discovery of new and unclassified species of oil-eating bacteria that apparently lives in the deep Gulf where oil seeps are common. Using 16s microarrays, functional gene arrays, clone libraries, lipid analysis and a variety of hydrocarbon and micronutrient analyses we were able to characterize the oil degraders. Metagenomic sequence data was obtained for the deep-water samples using the Illumina platform. In addition, single cells were sorted and sequenced for the some of the most dominant bacteria that were represented in the oil plume; namely uncultivated representatives of Colwellia and Oceanospirillum. In addition, we performed laboratory microcosm experiments using uncontaminated water collected from The Gulf at the depth of the oil plume to which we added oil and COREXIT. These samples were characterized by 454 pyrotag. The results provide information about the key players and processes involved in degradation of oil, with and without COREXIT, in different impacted environments in The Gulf of Mexico. We are also extending these studies to explore dozens of deep sediment samples that were also collected after the oil spill around the wellhead. This data suggests that a great potential for intrinsic bioremediation of oil plumes exists in the deep-sea and other environs in the Gulf of Mexico.

Silica Precipitation and Scaling in Dynamic Geothermal Systems

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bohlmann, E.G.; Shor, A.J.; Berlinski, P.

1976-01-01

The authors are modifying an existing 100 gpm titanium loop to provide a facility for studying the formation of silica precipitates, their properties and fates, principally as a function of brine composition, temperature, and flow conditions. This loop demonstrated excellent serviceability over a period of years in saline water corrosion studies (to 275 C and 2 M NaCl), with and without pollutant additives such as H{sub 2}S, NH{sub 3}, and SO{sub 2}, and should be equally useful in this application. Simulated silica saturated geothermal waters are prepared by circulating part of the loop flow ({approx} 1 gpm) through a bypassmore » column filled with amorphous silica powder. Exploratory studies in a Once-Through Development System indicated that porous Vycor (Cornin-Glass Code No.7930, 97% SiO{sub 2}, 3% B{sub 2}O{sub 3}) was a suitable material for loading the column. A recent run at {approx} 220 C confirmed this: the system approached equilibrium in agreement with calculation and with the anticipated 15 psi pressure drop through an 18 in. deep bed of 140-200 mesh Vycor powder.« less

Estimating hydraulic properties using a moving-model approach and multiple aquifer tests.

PubMed

Halford, Keith J; Yobbi, Dann

2006-01-01

A new method was developed for characterizing geohydrologic columns that extended >600 m deep at sites with as many as six discrete aquifers. This method was applied at 12 sites within the Southwest Florida Water Management District. Sites typically were equipped with multiple production wells, one for each aquifer and one or more observation wells per aquifer. The average hydraulic properties of the aquifers and confining units within radii of 30 to >300 m were characterized at each site. Aquifers were pumped individually and water levels were monitored in stressed and adjacent aquifers during each pumping event. Drawdowns at a site were interpreted using a radial numerical model that extended from land surface to the base of the geohydrologic column and simulated all pumping events. Conceptually, the radial model moves between stress periods and recenters on the production well during each test. Hydraulic conductivity was assumed homogeneous and isotropic within each aquifer and confining unit. Hydraulic property estimates for all of the aquifers and confining units were consistent and reasonable because results from multiple aquifers and pumping events were analyzed simultaneously.

The Impact of Eutrophication on Mercury Cycling in Lake 227 at the Experimental Lakes Area in Northwestern Ontario

NASA Astrophysics Data System (ADS)

Kirk, J.; Lehnherr, I.; Gleason, A.; St. Louis, V. L.; Muir, D.

2012-12-01

Mercury (Hg) is a pollutant of global concern as concentrations of methyl mercury (MeHg), the toxic and bioaccumulative form of Hg, are often present in fish at levels high enough to pose health risks to consumers. Although we are beginning to understand the factors controlling MeHg production in freshwater lakes, the impacts of environmental disturbances, such as eutrophication, on Hg cycling are not known. As part of a larger project examining controls on eutrophication, we are studying Hg cycling and MeHg production in the artificially eutrophied Lake 227 at the Experimental Lakes Area in northwestern Ontario. In addition to 40 years of ancillary data, Lake 227 is ideal for this study as it has an anoxic hypolimnion which may be an important zone of microbial MeHg production. To determine sources and losses of inorganic Hg(II) and MeHg from the lake, we are using a mass balance approach including: detailed lake profiles to determine the water column pools of Hg(II) and MeHg, Hg(II) and MeHg inputs via precipitation, and losses of Hg(II) and MeHg from the lake via gaseous elemental Hg(0) evasion and MeHg photodemethylation, respectively. Rates of water column MeHg production are also being determined using Hg stable isotope tracer experiments. 2010-2011 water column profiles demonstrated that although total Hg (THg) and MeHg concentrations were fairly low in Lake 227 surface waters (2.42 ± 0.64 and 0.11 ± 0.06 ng/L, respectively), MeHg concentrations (1.08 ± 0.39 ng/L) and the % THg that was MeHg (16 ± 5%) were high in deep regions of the water column (6-9 m). The zone of elevated water column MeHg expanded throughout summers 2010-2011, closely following the zone of anoxia, suggesting MeHg is produced in the anoxic hypolimnion. The zone of high particulate-bound THg (62 ± 6%) also migrated with the zone of anoxia over the summer suggesting that particle sinking and sediment resuspension, which are controlled by the timing of algal blooms, are important controls on THg cycling in Lake 227. Using average summer-time water-air fluxes of elemental Hg(0), calculated from surface water Hg(0) concentrations and the site specific gas transfer velocity, we estimate that Hg(0) evasion can account for the loss of ~119 mg of Hg, or ~15% of the THg pool, from Lake 227 from June-October and is therefore an important mechanism of Hg loss. During this period, precipitation was an input of only ~80 mg of THg; however the size of the lake THg pool changed very little (786 to752 mg) suggesting that resuspension and runoff are important to THg cycling in Lake 227. Calculated rates of MeHg production in Lake 227 were 5.5 and 8.2 ng/m2/day in 2010 and 2011, respectively, and are similar to those observed in boreal wetlands, which are known sites of elevated MeHg production. Results to date suggest that eutrophication amplifies features of Hg cycling already present in pristine lakes, such as water column methylation in anoxic waters. Algal blooms, for example, result in larger anoxic zones that last longer and provide more carbon to fuel water column microbial methylation, resulting in higher MeHg production.

Hydrothermal sediments are a source of water column Fe and Mn in the Bransfield Strait, Antarctica

NASA Astrophysics Data System (ADS)

Aquilina, Alfred; Homoky, William B.; Hawkes, Jeffrey A.; Lyons, Timothy W.; Mills, Rachel A.

2014-07-01

Short sediment cores were collected from ∼1100 m water depth at the top of Hook Ridge, a submarine volcanic edifice in the Central Basin of the Bransfield Strait, Antarctica, to assess Fe and Mn supply to the water column. Low-temperature hydrothermal fluids advect through these sediments and, in places, subsurface H2S is present at high enough concentrations to support abundant Sclerolinum sp., an infaunal tubeworm that hosts symbiotic thiotrophic bacteria. The water column is fully oxic, and oxygen penetration depths at all sites are 2-5 cmbsf. Pore water Fe and Mn content is high within the subsurface ferruginous zone (max. 565 μmol Fe L-1, >3-7 cmbsf)-14-18 times higher than values measured at a nearby, background site of equivalent water depth. Diffusion and advection of pore waters supply significant Fe and Mn to the surface sediment. Sequential extraction of the sediment demonstrates that there is a significant enrichment in a suite of reactive, authigenic Fe minerals in the upper 0-5 cm of sediment at one site characterised by weathered crusts at the seafloor. At a site with only minor authigenic mineral surface enrichment we infer that leakage of pore water Fe and Mn from the sediment leads to enriched total dissolvable Fe and Mn in bottom waters. An Eh sensor mounted on a towed package mapped a distinct Eh signature above this coring site which is dispersed over several km at the depth of Hook Ridge. We hypothesise that the main mechanism for Fe and Mn efflux from the sediment is breach of the surface oxic layer by the abundant Sclerolinum sp., along with episodic enhancements by physical mixing and resuspension of sediment in this dynamic volcanic environment. We propose that Hook Ridge sediments are an important source of Fe and Mn to the deep waters of the Central Basin in the Bransfield Strait, where concentrations are sustained by the benthic flux, and Fe is stabilised in the water column as either colloidal phases or ligand-bound dissolved species. Entrainment of this water mass into the Drake Passage and thereby the Antarctic Circumpolar Current could provide a significant metal source to this HNLC region of the Southern Ocean if mixing and upwelling occurs before removal of this metal pool to underlying sediments. Sediment-covered volcanic ridges are common within rifted margins and may play a previously overlooked role in the global Fe cycle.

The tropical precipitation pickup threshold and clouds in a radiative convective equilibrium model: 2. Two-layer moisture

NASA Astrophysics Data System (ADS)

Igel, Matthew R.

2017-06-01

This paper complements Part 1 in which cloud processes of aggregated convection are examined in a large-domain radiative convective equilibrium simulation in order to uncover those responsible for a consistently observed, abrupt increase in mean precipitation at a column relative humidity value of approximately 77%. In Part 2, the focus is on how the transition is affected independently by total moisture above and below the base of the melting layer. When mean precipitation rates are examined as simultaneous functions of these two moisture layers, four distinct behaviors are observed. These four behaviors suggest unique, yet familiar, physical regimes in which (i) little rain is produced by infrequent clouds, (ii) shallow convection produces increasing warm rain with increasing low-level moisture, (iii) deep convection produces progressively heavier rain above the transition point with increasing total moisture, and (iv) deep stratiform cloud produces increasingly intense precipitation from melting for increasing upper level moisture. The independent thresholds separating regimes in upper and lower layer humidity are shown to result in the value of total column humidity at which a transition between clear air and deep convection, and therefore a pickup in precipitation, is possible. All four regimes force atmospheric columns toward the pickup value at 77% column humidity, but each does so through a unique set of physical processes. Layer moisture and microphysical budgets are analyzed and contrasted with column budgets.

Nitrate supply from deep to near-surface waters of the North Pacific subtropical gyre.

PubMed

Johnson, Kenneth S; Riser, Stephen C; Karl, David M

2010-06-24

Concentrations of dissolved inorganic carbon (DIC) decrease in the surface mixed layers during spring and summer in most of the oligotrophic ocean. Mass balance calculations require that the missing DIC is converted into particulate carbon by photosynthesis. This DIC uptake represents one of the largest components of net community production in the world ocean. However, mixed-layer waters in these regions of the ocean typically contain negligible concentrations of plant nutrients such as nitrate and phosphate. Combined nutrient supply mechanisms including nitrogen fixation, diffusive transport and vertical entrainment are believed to be insufficient to supply the required nutrients for photosynthesis. The basin-scale potential for episodic nutrient transport by eddy events is unresolved. As a result, it is not understood how biologically mediated DIC uptake can be supported in the absence of nutrients. Here we report on high-resolution measurements of nitrate (NO(3)(-)) and oxygen (O(2)) concentration made over 21 months using a profiling float deployed near the Hawaii Ocean Time-series station in the North Pacific subtropical gyre. Our measurements demonstrate that as O(2) was produced and DIC was consumed over two annual cycles, a corresponding seasonal deficit in dissolved NO(3)(-) appeared in water at depths from 100 to 250 m. The deep-water deficit in NO(3)(-) was in near-stoichiometric balance with the fixed nitrogen exported to depth. Thus, when the water column from the surface to 250 m is considered as a whole, there is near equivalence between nutrient supply and demand. Short-lived transport events (<10 days) that connect deep stocks of nitrate to nutrient-poor surface waters were clearly present in 12 of the 127 vertical profiles.

Parameterizing deep convection using the assumed probability density function method

DOE PAGES

Storer, R. L.; Griffin, B. M.; Höft, J.; ...

2014-06-11

Due to their coarse horizontal resolution, present-day climate models must parameterize deep convection. This paper presents single-column simulations of deep convection using a probability density function (PDF) parameterization. The PDF parameterization predicts the PDF of subgrid variability of turbulence, clouds, and hydrometeors. That variability is interfaced to a prognostic microphysics scheme using a Monte Carlo sampling method. The PDF parameterization is used to simulate tropical deep convection, the transition from shallow to deep convection over land, and mid-latitude deep convection. These parameterized single-column simulations are compared with 3-D reference simulations. The agreement is satisfactory except when the convective forcing ismore » weak. The same PDF parameterization is also used to simulate shallow cumulus and stratocumulus layers. The PDF method is sufficiently general to adequately simulate these five deep, shallow, and stratiform cloud cases with a single equation set. This raises hopes that it may be possible in the future, with further refinements at coarse time step and grid spacing, to parameterize all cloud types in a large-scale model in a unified way.« less

Parameterizing deep convection using the assumed probability density function method

DOE Office of Scientific and Technical Information (OSTI.GOV)

Storer, R. L.; Griffin, B. M.; Höft, J.

2015-01-06

Due to their coarse horizontal resolution, present-day climate models must parameterize deep convection. This paper presents single-column simulations of deep convection using a probability density function (PDF) parameterization. The PDF parameterization predicts the PDF of subgrid variability of turbulence, clouds, and hydrometeors. That variability is interfaced to a prognostic microphysics scheme using a Monte Carlo sampling method.The PDF parameterization is used to simulate tropical deep convection, the transition from shallow to deep convection over land, and midlatitude deep convection. These parameterized single-column simulations are compared with 3-D reference simulations. The agreement is satisfactory except when the convective forcing is weak.more » The same PDF parameterization is also used to simulate shallow cumulus and stratocumulus layers. The PDF method is sufficiently general to adequately simulate these five deep, shallow, and stratiform cloud cases with a single equation set. This raises hopes that it may be possible in the future, with further refinements at coarse time step and grid spacing, to parameterize all cloud types in a large-scale model in a unified way.« less

Parameterizing deep convection using the assumed probability density function method

DOE Office of Scientific and Technical Information (OSTI.GOV)

Storer, R. L.; Griffin, B. M.; Hoft, Jan

2015-01-06

Due to their coarse horizontal resolution, present-day climate models must parameterize deep convection. This paper presents single-column simulations of deep convection using a probability density function (PDF) parameterization. The PDF parameterization predicts the PDF of subgrid variability of turbulence, clouds, and hydrometeors. That variability is interfaced to a prognostic microphysics scheme using a Monte Carlo sampling method.The PDF parameterization is used to simulate tropical deep convection, the transition from shallow to deep convection over land, and mid-latitude deep convection.These parameterized single-column simulations are compared with 3-D reference simulations. The agreement is satisfactory except when the convective forcing is weak. Themore » same PDF parameterization is also used to simulate shallow cumulus and stratocumulus layers. The PDF method is sufficiently general to adequately simulate these five deep, shallow, and stratiform cloud cases with a single equation set. This raises hopes that it may be possible in the future, with further refinements at coarse time step and grid spacing, to parameterize all cloud types in a large-scale model in a unified way.« less

Beam-column joint shear prediction using hybridized deep learning neural network with genetic algorithm

NASA Astrophysics Data System (ADS)

Mundher Yaseen, Zaher; Abdulmohsin Afan, Haitham; Tran, Minh-Tung

2018-04-01

Scientifically evidenced that beam-column joints are a critical point in the reinforced concrete (RC) structure under the fluctuation loads effects. In this novel hybrid data-intelligence model developed to predict the joint shear behavior of exterior beam-column structure frame. The hybrid data-intelligence model is called genetic algorithm integrated with deep learning neural network model (GA-DLNN). The genetic algorithm is used as prior modelling phase for the input approximation whereas the DLNN predictive model is used for the prediction phase. To demonstrate this structural problem, experimental data is collected from the literature that defined the dimensional and specimens’ properties. The attained findings evidenced the efficitveness of the hybrid GA-DLNN in modelling beam-column joint shear problem. In addition, the accurate prediction achived with less input variables owing to the feasibility of the evolutionary phase.

Basic Aspects of Deep Soil Mixing Technology Control

NASA Astrophysics Data System (ADS)

Egorova, Alexandra A.; Rybak, Jarosław; Stefaniuk, Damian; Zajączkowski, Przemysław

2017-10-01

Improving a soil is a process of increasing its physical/mechanical properties without changing its natural structure. Improvement of soil subbase is reached by means of the knitted materials, or other methods when strong connection between soil particles is established. The method of DSM (Deep Soil Mixing) columns has been invented in Japan in 1970s. The main reason of designing cement-soil columns is to improve properties of local soils (such as strength and stiffness) by mixing them with various cementing materials. Cement and calcium are the most commonly used binders. However new research undertaken worldwide proves that apart from these materials, also gypsum or fly ashes can also be successfully implemented. As the Deep Soil Mixing is still being under development, anticipating mechanical properties of columns in particular soils and the usage of cementing materials in formed columns is very difficult and often inappropriate to predict. That is why a research is carried out in order to find out what binders and mixing technology should be used. The paper presents several remarks on the testing procedures related to quality and capacity control of Deep Soil Mixing columns. Soil improvement methods, their advantages and limitations are briefly described. The authors analyse the suitability of selected testing methods on subsequent stages of design and execution of special foundations works. Chosen examples from engineering practice form the basis for recommendations for the control procedures. Presented case studies concerning testing the on capacity field samples and laboratory procedures on various categories of soil-cement samples were picked from R&D and consulting works offered by Wroclaw University of Science and Technology. Special emphasis is paid to climate conditions which may affect the availability of performing and controlling of DSM techniques in polar zones, with a special regard to sample curing.

Early Cambrian oxygen minimum zone-like conditions at Chengjiang

NASA Astrophysics Data System (ADS)

Hammarlund, Emma U.; Gaines, Robert R.; Prokopenko, Maria G.; Qi, Changshi; Hou, Xian-Guang; Canfield, Donald E.

2017-10-01

The early Cambrian succession at Chengjiang contains the most diverse Cambrian fossil assemblage yet described, and contributes significantly to our understanding of the diversification of metazoans in the Cambrian ;explosion;. The Cambrian Period occupies a transitional episode of global ocean chemistry, following the oxygenation of the surface ocean and of shallow marine environments during the Ediacaran Period, but prior to the establishment of a predominantly oxygenated deep ocean in the mid-Paleozoic. Despite recent attention, a detailed understanding of the chemical conditions that prevailed in early Cambrian marine settings and the relationship of those conditions to early metazoan ecosystems is still emerging. Here, we report multi-proxy geochemical data from two drill cores through the early Cambrian (Series 2) Yu'anshan Formation of Yunnan, China. Results reveal dynamic water-column chemistry within the succession, which progressively shifted from euxinic to oxic conditions during deposition of the Yu'anshan Formation. The Chengjiang biota occurs in strata that appear to have been deposited under an oxygen-depleted water column that may have supported denitrification, as in modern oxygen-minimum zones. The oxygenated benthic environments in which the Chengjiang biota thrived were proximal to, but sharply separated from, the open ocean by a persistent anoxic water mass that occupied a portion of the outer shelf. Oxygen depletion in the lower water column developed dynamically in response to nutrient availability and possibly at lower thresholds of productivity due to lower atmospheric oxygen concentrations in Cambrian. These findings suggest that the frequent development of oxygen-limiting conditions in continental margin settings provided an environmental barrier that may have affected biogeographic, ecological and evolutionary development of early metazoan communities.

Total- and methyl-mercury concentrations and methylation rates across the freshwater to hypersaline continuum of the Great Salt Lake, Utah, USA.

PubMed

Johnson, William P; Swanson, Neil; Black, Brooks; Rudd, Abigail; Carling, Greg; Fernandez, Diego P; Luft, John; Van Leeuwen, Jim; Marvin-DiPasquale, Mark

2015-04-01

We examined mercury (Hg) speciation in water and sediment of the Great Salt Lake and surrounding wetlands, a locale spanning fresh to hypersaline and oxic to anoxic conditions, in order to test the hypothesis that spatial and temporal variations in Hg concentration and methylation rates correspond to observed spatial and temporal trends in Hg burdens previously reported in biota. Water column, sediment, and pore water concentrations of methylmercury (MeHg) and total mercury (THg), as well as related aquatic chemical parameters were examined. Inorganic Hg(II)-methylation rates were determined in selected water column and sediment subsamples spiked with inorganic divalent mercury (204Hg(II)). Net production of Me204Hg was expressed as apparent first-order rate constants for methylation (kmeth), which were also expanded to MeHg production potential (MPP) rates via combination with tin reducible 'reactive' Hg(II) (Hg(II)R) as a proxy for bioavailable Hg(II). Notable findings include: 1) elevated Hg concentrations previously reported in birds and brine flies were spatially proximal to the measured highest MeHg concentrations, the latter occurring in the anoxic deep brine layer (DBL) of the Great Salt Lake; 2) timing of reduced Hg(II)-methylation rates in the DBL (according to both kmeth and MPP) coincides with reduced Hg burdens among aquatic invertebrates (brine shrimp and brine flies) that act as potential vectors of Hg propagation to the terrestrial ecosystem; 3) values of kmeth were found to fall within the range reported by other studies; and 4) MPP rates were on the lower end of the range reported in methodologically comparable studies, suggesting the possibility that elevated MeHg in the anoxic deep brine layer results from its accumulation and persistence in this quasi-isolated environment, due to the absence of light (restricting abiotic photo demethylation) and/or minimal microbiological demethylation. Copyright © 2014 Elsevier B.V. All rights reserved.

Total- and methyl-mercury concentrations and methylation rates across the freshwater to hypersaline continuum of the Great Salt Lake, Utah, USA

USGS Publications Warehouse

Johnson, William P.; Swanson, Neil; Black, Brooks; Rudd, Abigail; Carling, Gregory; Fernandez, Diego P.; Luft, John; Van Leeuwen, Jim; Marvin-DiPasquale, Mark C.

2015-01-01

We examined mercury (Hg) speciation in water and sediment of the Great Salt Lake and surrounding wetlands, a locale spanning fresh to hypersaline and oxic to anoxic conditions, in order to test the hypothesis that spatial and temporal variations in Hg concentration and methylation rates correspond to observed spatial and temporal trends in Hg burdens previously reported in biota. Water column, sediment, and pore water concentrations of methylmercury (MeHg) and total mercury (THg), as well as related aquatic chemical parameters were examined. Inorganic Hg(II)-methylation rates were determined in selected water column and sediment subsamples spiked with inorganic divalent mercury (204Hg(II)). Net production of Me204Hg was expressed as apparent first-order rate constants for methylation (kmeth), which were also expanded to MeHg production potential (MPP) rates via combination with tin reducible ‘reactive’ Hg(II) (Hg(II)R) as a proxy for bioavailable Hg(II). Notable findings include: 1) elevated Hg concentrations previously reported in birds and brine flies were spatially proximal to the measured highest MeHg concentrations, the latter occurring in the anoxic deep brine layer (DBL) of the Great Salt Lake; 2) timing of reduced Hg(II)-methylation rates in the DBL (according to both kmeth and MPP) coincides with reduced Hg burdens among aquatic invertebrates (brine shrimp and brine flies) that act as potential vectors of Hg propagation to the terrestrial ecosystem; 3) values ofkmeth were found to fall within the range reported by other studies; and 4) MPP rates were on the lower end of the range reported in methodologically comparable studies, suggesting the possibility that elevated MeHg in the anoxic deep brine layer results from its accumulation and persistence in this quasi-isolated environment, due to the absence of light (restricting abiotic photo demethylation) and/or minimal microbiological demethylation.

Methanotrophy within the water column of a large meromictic tropical lake (Lake Kivu, East Africa)

NASA Astrophysics Data System (ADS)

Morana, C.; Borges, A. V.; Roland, F. A. E.; Darchambeau, F.; Descy, J.-P.; Bouillon, S.

2015-04-01

The permanently stratified Lake Kivu is one of the largest freshwater reservoirs of dissolved methane (CH4) on Earth. Yet CH4 emissions from its surface to the atmosphere have been estimated to be 2 orders of magnitude lower than the CH4 upward flux to the mixed layer, suggesting that microbial CH4 oxidation is an important process within the water column. A combination of natural abundance stable carbon isotope analysis (δ13C) of several carbon pools and 13CH4-labelling experiments was carried out during the rainy and dry season to quantify (i) the contribution of CH4-derived carbon to the biomass, (ii) methanotrophic bacterial production (MBP), and (iii) methanotrophic bacterial growth efficiency (MBGE), defined as the ratio between MBP and gross CH4 oxidation. We also investigated the distribution and the δ13C of specific phospholipid fatty acids (PLFAs), used as biomarkers for aerobic methanotrophs. Maximal MBP rates were measured in the oxycline, suggesting that CH4 oxidation was mainly driven by oxic processes. Moreover, our data revealed that methanotrophic organisms in the water column oxidized most of the upward flux of CH4, and that a significant amount of CH4-derived carbon was incorporated into the microbial biomass in the oxycline. The MBGE was variable (2-50%) and negatively related to CH4 : O2 molar ratios. Thus, a comparatively smaller fraction of CH4-derived carbon was incorporated into the cellular biomass in deeper waters, at the bottom of the oxycline where oxygen was scarce. The aerobic methanotrophic community was clearly dominated by type I methanotrophs and no evidence was found for an active involvement of type II methanotrophs in CH4 oxidation in Lake Kivu, based on fatty acids analyses. Vertically integrated over the water column, the MBP was equivalent to 16-60% of the average phytoplankton particulate primary production. This relatively high magnitude of MBP, and the substantial contribution of CH4-derived carbon to the overall biomass in the oxycline, suggest that methanotrophic bacteria could potentially sustain a significant fraction of the pelagic food web in the deep, meromictic Lake Kivu.

Effect of en-glacial water on ice sheet temperatures in a warming climate - a model approach

NASA Astrophysics Data System (ADS)

Phillips, T. P.; Rajaram, H.; Steffen, K.

2009-12-01

Each summer, significant amount of melt is generated in the ablation zones of large glaciers and ice sheets. This melt does not run off on the surface of the glacier or ice sheet. In fact a significant fraction enters the glacier and flows through en-glacial and sub-glacial hydrologic systems. Correspondingly, the en-glacial and sub-glacial hydrologic systems are brought to a temperature close to the pressure melting point of ice. The thermal influence of these hydrologic processes is seldom incorporated in heat transfer models for glaciers and ice sheets. In a warming climate, as melt water generation is amplified, en-glacial and sub-glacial hydrologic processes can influence the thermal dynamics of an ice sheet significantly, a feedback which is missed in current models. Although the role of refreezing melt water in the firn of the accumulation zone is often accounted for to explain warmer near-surface temperatures, the role of melt water flow within a glacier is not considered in large ice sheet models. We propose a simple parameterization of the influence of en-glacial and sub-glacial hydrology on the thermal dynamics of ice sheets, in the form of a dual-column model. Our model basically modifies the classical Budd column model for temperature variations in ice sheets by introducing an interaction with an en-glacial column, where the temperature is brought to the melting point during the melt season, and winter-time refreezing is influenced by latent heat effects associated with water retained within the en-glacial and sub-glacial systems. A cryo-hydraulic heat exchange coefficient ς is defined, as a parameter that quantifies this interaction. The parameter ς is related to k/R^2, where R is the characteristic spacing between en-glacial passages. The general behavior of the dual-column model is influenced by the competition between cooling by horizontal advection and warming by cryo-hydraulic exchange. We present a dimensionless parameter to quantify this competition. Model simulations indicate that the combination of en-glacial water flow and winter snow cover can warm the ice and produce a higher steady state en-glacial temperature. Transient simulations indicate a spin-up period of approximately 10 years until the new steady state is attained. The en-glacially trapped water prevents the ice from cooling as the Arctic winter approaches. As the water refreezes in the shallow ice, the snow cover reaches a thickness that insulates the ice and slows further cooling. The en-glacial temperature is highly dependent on the magnitude of the cryo-hydraulic term (warming) and the magnitude of the horizontal advection term (cooling) which control the newly reached balance. The dual-column model was applied to analyze deep borehole temperature profiles from five sites on Dead Glacier in western Greenland north of Jakobshavn Glacier. The model was able to explain some features of the borehole temperatures that cannot be explained by the conventional single column model.

Wintertime re-ventilation of the East Greenland Current's Atlantic-origin Overflow Water in the western Iceland Sea

NASA Astrophysics Data System (ADS)

Våge, Kjetil; Håvik, Lisbeth; Papritz, Lukas; Spall, Michael; Moore, Kent

2017-04-01

The Deep Western Boundary Current constitutes the lower limb of the Atlantic Meridional Overturning Circulation, and, as such, is a crucial component of the Earth's climate system. The largest and densest contribution to the current stems from the overflow plume that passes through Denmark Strait. A main source of Denmark Strait Overflow Water (DSOW) is the East Greenland Current (EGC). The DSOW transported by the EGC originates from the Atlantic inflow into the Nordic Seas. This is then transformed into Atlantic-origin Overflow Water while progressing northward through the eastern part of the Nordic Seas. Here we show, using measurements from autonomous gliders deployed from fall 2015 to spring 2016, that the Atlantic-origin Overflow Water transported toward Denmark Strait by the EGC was re-ventilated while transiting the western Iceland Sea in winter. In summer, this region is characterized by an upper layer of cold, fresh Polar Surface Water that is thought to prevent convection. But in fall and winter this fresh water mass is diverted toward the Greenland shelf by enhanced northerly winds, which results in a water column that is preconditioned for convection. Severe heat loss from the ocean to the atmosphere offshore of the ice edge subsequently causes the formation of deep mixed layers. This further transforms the Atlantic-origin Overflow Water and impacts the properties of the DSOW, and hence the deepest and densest component of the lower limb of the Atlantic Meridional Overturning Circulation.

Microbial Influences on Trace Metal Cycling in a Meromictic Lake, Fayetteville Green Lake, NY

NASA Astrophysics Data System (ADS)

Zerkle, A. L.; House, C.; Kump, L.

2002-12-01

Microorganisms can exist in aquatic environments at very high cell densities of up to 1011 cells/L, and can accumulate significant quantities of trace metals. Bacteria actively take up bioactive trace metals, including Fe, Zn, Mn, Co, Ni, Cu, and Mo, which function as catalytic centers in metalloproteins and metal-activated enzymes involved in virtually all cellular functions. In addition, bacteria may catalyze the release of trace metals from inorganic substrates by processes such as the reduction of iron and manganese oxides, suggesting that trace metal distributions within a natural environment dominated by microbial processes may be controlled primarily by microbial ecology. Fayetteville Green Lake (FGL), NY, is a permanently stratified meromictic lake that has a well-oxygenated surface water mass (mixolimnion) overlying a relatively stagnant, anoxic deep water mass (monimolimnion). A chemocline separates the water masses at around 20m depth, where oxygen concentrations decrease and sulfate and methane concentrations increase. In addition, previous studies have indicated that trace metals such as V, Cr, Co, Mn, and Fe reach elevated concentrations at the chemocline. Using fluorescent in situ hybridization (FISH) of FGL samples from depths of up to 40m with bacterial and archaeal probes, we have shown that fluctuating redox conditions within the FGL water column correlate with significant variations in the composition and distribution of microbial populations with depth. The mixolimnion is dominated by Eubacteria, with increasing concentrations of Archaea in the lower anoxic zone. Increases in microbial cell densities coincide with increases in trace metals at the chemocline, suggesting microbial activity may be responsible for trace metal release at this boundary. 16S rRNA PCR cloning techniques are currently being used to identify dominant microbial populations at various levels within the FGL water column. Future studies will focus on the potential for these dominant microorganisms to influence trace metal cycling and bioavailability in the FGL water column.

Sedimentary sources of old high molecular weight dissolved organic carbon from the ocean margin benthic nepheloid layer

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guo, L. Santschi, P.H.

2000-02-01

Average {sup 14}C ages of dissolved organic carbon (DOC) in the ocean are 3--6,000 years, and are influenced by old DOC from continental margins. However, sources of DOC from terrestrial, autochthonous, and sedimentary organic carbon seem to be too young to be responsible for the old DOC observed in the ocean. Since colloidal organic carbon (COC, i.e., high molecular weight DOC), which is chemically very similar to that of bulk DOC, can be effectively isolated from seawater using cross-flow ultrafiltration, it can hold clues to sources and pathways of DOC turnover in the ocean. Radiocarbon measurements on COC in themore » water column and benthic nepheloid layer (BNL) from two continental margin areas (the Middle Atlantic Bight and the Gulf of Mexico) and controlled laboratory experiments were carried out to study sources of old DOC in the ocean margin areas. Vertical distributions of suspended particulate matter (SPM), particulate organic carbon (POC), nitrogen (PON), and DOC in the water column and bottom waters near the sediment-water interface all demonstrate a well developed benthic nepheloid layer in both ocean margin areas. COC from the BNL was much older than COC from the overlying water column. These results, together with strong concentration gradients of SPM, POC, PON, and DOC, suggest a sedimentary source for organic carbon species and possibly for old COC as well in BNL waters. This is confirmed by the results from controlled laboratory experiments. The heterogeneity of {Delta}{sup 14}C signatures in bulk SOC thus points to a preferential release of old organic components from sediment resuspension, which can be the transport mechanism of the old benthic COC observed in ocean margin areas. Old COC from continental margin nepheloid layers may thus be a potential source of old DOC to the deep ocean.« less

Estimating trans-seasonal variability in water column biomass for a highly migratory, deep diving predator.

PubMed

O'Toole, Malcolm D; Lea, Mary-Anne; Guinet, Christophe; Hindell, Mark A

2014-01-01

The deployment of animal-borne electronic tags is revolutionizing our understanding of how pelagic species respond to their environment by providing in situ oceanographic information such as temperature, salinity, and light measurements. These tags, deployed on pelagic animals, provide data that can be used to study the ecological context of their foraging behaviour and surrounding environment. Satellite-derived measures of ocean colour reveal temporal and spatial variability of surface chlorophyll-a (a useful proxy for phytoplankton distribution). However, this information can be patchy in space and time resulting in poor correspondence with marine animal behaviour. Alternatively, light data collected by animal-borne tag sensors can be used to estimate chlorophyll-a distribution. Here, we use light level and depth data to generate a phytoplankton index that matches daily seal movements. Time-depth-light recorders (TDLRs) were deployed on 89 southern elephant seals (Mirounga leonina) over a period of 6 years (1999-2005). TDLR data were used to calculate integrated light attenuation of the top 250 m of the water column (LA(250)), which provided an index of phytoplankton density at the daily scale that was concurrent with the movement and behaviour of seals throughout their entire foraging trip. These index values were consistent with typical seasonal chl-a patterns as measured from 8-daySea-viewing Wide Field-of-view Sensor (SeaWiFs) images. The availability of data recorded by the TDLRs was far greater than concurrent remotely sensed chl-a at higher latitudes and during winter months. Improving the spatial and temporal availability of phytoplankton information concurrent with animal behaviour has ecological implications for understanding the movement of deep diving predators in relation to lower trophic levels in the Southern Ocean. Light attenuation profiles recorded by animal-borne electronic tags can be used more broadly and routinely to estimate lower trophic distribution at sea in relation to deep diving predator foraging behaviour.

Convective Available Potential Energy of World Ocean

NASA Astrophysics Data System (ADS)

Su, Z.; Ingersoll, A. P.; Thompson, A. F.

2012-12-01

Here, for the first time, we propose the concept of Ocean Convective Available Potential Energy (OCAPE), which is the maximum kinetic energy (KE) per unit seawater mass achievable by ocean convection. OCAPE occurs through a different mechanism from atmospheric CAPE, and involves the interplay of temperature and salinity on the equation of state of seawater. The thermobaric effect, which arises because the thermal coefficient of expansion increases with depth, is an important ingredient of OCAPE. We develop an accurate algorithm to calculate the OCAPE for a given temperature and salinity profile. We then validate our calculation of OCAPE by comparing it with the conversion of OCAPE to KE in a 2-D numerical model. We propose that OCAPE is an important energy source of ocean deep convection and contributes to deep water formation. OCAPE, like Atmospheric CAPE, can help predict deep convection and may also provide a useful constraint for modelling deep convection in ocean GCMs. We plot the global distribution of OCAPE using data from the World Ocean Atlas 2009 (WOA09) and see many important features. These include large values of OCAPE in the Labrador, Greenland, Weddell and Mediterranean Seas, which are consistent with our present observations and understanding, but also identify some new features like the OCAPE pattern in the Antarctic Circumpolar Current (ACC). We propose that the diagnosis of OCAPE can improve our understanding of global patterns of ocean convection and deep water formation as well as ocean stratification, the meridional overturning circulation and mixed layer processes. The background of this work is briefly introduced as below. Open-ocean deep convection can significantly modify water properties both at the ocean surface and throughout the water column (Gordon 1982). Open-ocean convection is also an important mechanism for Ocean Deep Water formation and the transport of heat, freshwater and nutrient (Marshall and Schott 1999). Open-ocean convection may arise through strong surface buoyancy fluxes (Schott et al. 1996), or by thermobaric instability (Akitomo 1999a, b). Ingersoll (2005) demonstrated that thermobaric-induced deep convection is due to the abrupt release of ocean potential energy into kinetic energy. In atmospheric dynamics, Convective Available Potential Energy (CAPE) has long been an important thermodynamic variable (Arakawa and Schubert 1974) that has been used to forecast moist convection (Doswell and Rasmussen 1994) and to test the performance of GCMs (Ye et al. 1998). However, the development of a similar diagnostic in the ocean has received little attention.; World Ocean Convective Available Potential Energy distribution in North-Hemisphere Autumn (J/kg)

Genomes of Novel Microbial Lineages Assembled from the Sub-Ice Waters of Lake Baikal

PubMed Central

Cabello-Yeves, Pedro J.; Zemskaya, Tamara I.; Rosselli, Riccardo; Coutinho, Felipe H.; Zakharenko, Alexandra S.; Blinov, Vadim V.

2017-01-01

ABSTRACT We present a metagenomic study of Lake Baikal (East Siberia). Two samples obtained from the water column under the ice cover (5 and 20 m deep) in March 2016 have been deep sequenced and the reads assembled to generate metagenome-assembled genomes (MAGs) that are representative of the microbes living in this special environment. Compared with freshwater bodies studied around the world, Lake Baikal had an unusually high fraction of Verrucomicrobia. Other groups, such as Actinobacteria and Proteobacteria, were in proportions similar to those found in other lakes. The genomes (and probably cells) tended to be small, presumably reflecting the extremely oligotrophic and cold prevalent conditions. Baikal microbes are novel lineages recruiting very little from other water bodies and are distantly related to other freshwater microbes. Despite their novelty, they showed the closest relationship to genomes discovered by similar approaches from other freshwater lakes and reservoirs. Some of them were particularly similar to MAGs from the Baltic Sea, which, although it is brackish, connected to the ocean, and much more eutrophic, has similar climatological conditions. Many of the microbes contained rhodopsin genes, indicating that, in spite of the decreased light penetration allowed by the thick ice/snow cover, photoheterotrophy could be widespread in the water column, either because enough light penetrates or because the microbes are already adapted to the summer ice-less conditions. We have found a freshwater SAR11 subtype I/II representative showing striking synteny with Pelagibacter ubique strains, as well as a phage infecting the widespread freshwater bacterium Polynucleobacter. IMPORTANCE Despite the increasing number of metagenomic studies on different freshwater bodies, there is still a missing component in oligotrophic cold lakes suffering from long seasonal frozen cycles. Here, we describe microbial genomes from metagenomic assemblies that appear in the upper water column of Lake Baikal, the largest and deepest freshwater body on Earth. This lake is frozen from January to May, which generates conditions that include an inverted temperature gradient (colder up), decrease in light penetration due to ice, and, especially, snow cover, and oligotrophic conditions more similar to the open-ocean and high-altitude lakes than to other freshwater or brackish systems. As could be expected, most reconstructed genomes are novel lineages distantly related to others in cold environments, like the Baltic Sea and other freshwater lakes. Among them, there was a broad set of streamlined microbes with small genomes/intergenic spacers, including a new nonmarine Pelagibacter-like (subtype I/II) genome. PMID:29079621

Genomes of Novel Microbial Lineages Assembled from the Sub-Ice Waters of Lake Baikal.

PubMed

Cabello-Yeves, Pedro J; Zemskaya, Tamara I; Rosselli, Riccardo; Coutinho, Felipe H; Zakharenko, Alexandra S; Blinov, Vadim V; Rodriguez-Valera, Francisco

2018-01-01

We present a metagenomic study of Lake Baikal (East Siberia). Two samples obtained from the water column under the ice cover (5 and 20 m deep) in March 2016 have been deep sequenced and the reads assembled to generate metagenome-assembled genomes (MAGs) that are representative of the microbes living in this special environment. Compared with freshwater bodies studied around the world, Lake Baikal had an unusually high fraction of Verrucomicrobia Other groups, such as Actinobacteria and Proteobacteria , were in proportions similar to those found in other lakes. The genomes (and probably cells) tended to be small, presumably reflecting the extremely oligotrophic and cold prevalent conditions. Baikal microbes are novel lineages recruiting very little from other water bodies and are distantly related to other freshwater microbes. Despite their novelty, they showed the closest relationship to genomes discovered by similar approaches from other freshwater lakes and reservoirs. Some of them were particularly similar to MAGs from the Baltic Sea, which, although it is brackish, connected to the ocean, and much more eutrophic, has similar climatological conditions. Many of the microbes contained rhodopsin genes, indicating that, in spite of the decreased light penetration allowed by the thick ice/snow cover, photoheterotrophy could be widespread in the water column, either because enough light penetrates or because the microbes are already adapted to the summer ice-less conditions. We have found a freshwater SAR11 subtype I/II representative showing striking synteny with Pelagibacter ubique strains, as well as a phage infecting the widespread freshwater bacterium Polynucleobacter IMPORTANCE Despite the increasing number of metagenomic studies on different freshwater bodies, there is still a missing component in oligotrophic cold lakes suffering from long seasonal frozen cycles. Here, we describe microbial genomes from metagenomic assemblies that appear in the upper water column of Lake Baikal, the largest and deepest freshwater body on Earth. This lake is frozen from January to May, which generates conditions that include an inverted temperature gradient (colder up), decrease in light penetration due to ice, and, especially, snow cover, and oligotrophic conditions more similar to the open-ocean and high-altitude lakes than to other freshwater or brackish systems. As could be expected, most reconstructed genomes are novel lineages distantly related to others in cold environments, like the Baltic Sea and other freshwater lakes. Among them, there was a broad set of streamlined microbes with small genomes/intergenic spacers, including a new nonmarine Pelagibacter -like (subtype I/II) genome. Copyright © 2017 American Society for Microbiology.

Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria.

PubMed

Anantharaman, Karthik; Breier, John A; Sheik, Cody S; Dick, Gregory J

2013-01-02

Hydrothermal vents are a well-known source of energy that powers chemosynthesis in the deep sea. Recent work suggests that microbial chemosynthesis is also surprisingly pervasive throughout the dark oceans, serving as a significant CO(2) sink even at sites far removed from vents. Ammonia and sulfur have been identified as potential electron donors for this chemosynthesis, but they do not fully account for measured rates of dark primary production in the pelagic water column. Here we use metagenomic and metatranscriptomic analyses to show that deep-sea populations of the SUP05 group of uncultured sulfur-oxidizing Gammaproteobacteria, which are abundant in widespread and diverse marine environments, contain and highly express genes encoding group 1 Ni, Fe hydrogenase enzymes for H(2) oxidation. Reconstruction of near-complete genomes of two cooccurring SUP05 populations in hydrothermal plumes and deep waters of the Gulf of California enabled detailed population-specific metatranscriptomic analyses, revealing dynamic patterns of gene content and transcript abundance. SUP05 transcripts for genes involved in H(2) and sulfur oxidation are most abundant in hydrothermal plumes where these electron donors are enriched. In contrast, a second hydrogenase has more abundant transcripts in background deep-sea samples. Coupled with results from a bioenergetic model that suggest that H(2) oxidation can contribute significantly to the SUP05 energy budget, these findings reveal the potential importance of H(2) as a key energy source in the deep ocean. This study also highlights the genomic plasticity of SUP05, which enables this widely distributed group to optimize its energy metabolism (electron donor and acceptor) to local geochemical conditions.

Trace element distributions in the water column near the Deepwater Horizon well blowout.

PubMed

Joung, DongJoo; Shiller, Alan M

2013-03-05

To understand the impact of the Deepwater Horizon well blowout on dissolved trace element concentrations, samples were collected from areas around the oil rig explosion site during four cruises in early and late May 2010, October 2010, and October 2011. In surface waters, Ba, Fe, Cu, Ni, Mn, and Co were relatively well correlated with salinity during all cruises, suggesting mixing with river water was the main influence on metal distributions in these waters. However, in deep oil/gas plumes (1000-1400 m depth), modestly elevated concentrations of Co and Ba were observed in late May, compared with postblowout conditions. Analysis of the oil itself along with leaching experiments confirm the oil as the source of the Co, whereas increased Ba was likely due to drilling mud used in the top kill attempt. Deep plume dissolved Mn largely reflected natural benthic input, though some samples showed slight elevation probably associated with the top kill. Dissolved Fe concentrations were low and also appeared largely topographically controlled and reflective of benthic input. Estimates suggest that microbial Fe demand may have affected the Fe distribution but probably not to the extent of Fe becoming a growth-limiting factor. Experiments showed that the dispersant can have some limited impact on dissolved-particulate metal partitioning.

Multiple sulfur isotope records at the end-Guadalupian (Permian) at Chaotian, China: Implications for a role of bioturbation in the Phanerozoic sulfur cycle

NASA Astrophysics Data System (ADS)

Saitoh, Masafumi; Ueno, Yuichiro; Matsu'ura, Fumihiro; Kawamura, Tetsuya; Isozaki, Yukio; Yao, Jianxin; Ji, Zhansheng; Yoshida, Naohiro

2017-03-01

A recent study on quadruple sulfur isotopes (32S, 33S, 34S, and 36S) of sedimentary pyrite suggested that the end-Guadalupian extinction was caused by shoaling of the sulfidic deep-water. This scenario is based on the assumption that sulfur isotopic compositions of pyrite from hosting sediments were controlled by benthos activities, thus by the redox conditions of the sedimentary environments. Nonetheless, the relationship between the sulfur isotope records and redox conditions, reconstructed from litho- and bio-facies, are poorly known. In order to examine the effect of bioturbation in sediments, quadruple sulfur isotopic compositions of sedimentary pyrite from the end-Guadalupian succession in Chaotian, South China, were analyzed. Black mudstones of deep-water facies immediately below the extinction horizon have consistently high Δ33S values of ca. +0.079‰, clearly suggesting a sulfate reduction in the anoxic water column. Our new data are consistent with the emergence of a sulfidic deep-water mass prior to the end-Guadalupian extinction; the upwelling of the toxic deep-water may have contributed to the extinction. In contrast, shallow-marine bioclastic limestones with burrows deposited under oxic conditions have negative Δ33S values. This anomalous isotopic signal indicates the mixing of two distinct types of pyrite; one generated during the sulfate reduction in an open system and the other in a closed system. We interpret that bioturbation supplied sulfate in the sediments and promoted sulfate reduction and in-situ sulfide precipitation within the sediments. The negative Δ33S values of oxic sediments in Chaotian are inconsistent with the previous model and demonstrate that the sedimentary sulfur cycle associated with bioturbation was more complicated than previously thought. Our study also implies that, more generally, the role of bioturbation in increasing seawater sulfate concentration in the Phanerozoic may have been overestimated in the previous studies, because bioturbation may have enhanced sulfide burial or sulfur output from the oceans.

Technical Note: Detection of gas bubble leakage via correlation of water column multibeam images

NASA Astrophysics Data System (ADS)

Schneider von Deimling, J.; Papenberg, C.

2012-03-01

Hydroacoustic detection of natural gas release from the seafloor has been conducted in the past by using singlebeam echosounders. In contrast, modern multibeam swath mapping systems allow much wider coverage, higher resolution, and offer 3-D spatial correlation. Up to the present, the extremely high data rate hampers water column backscatter investigations and more sophisticated visualization and processing techniques are needed. Here, we present water column backscatter data acquired with a 50 kHz prototype multibeam system over a period of 75 seconds. Display types are of swath-images as well as of a "re-sorted" singlebeam presentation. Thus, individual and/or groups of gas bubbles rising from the 24 m deep seafloor clearly emerge in the acoustic images, making it possible to estimate rise velocities. A sophisticated processing scheme is introduced to identify those rising gas bubbles in the hydroacoustic data. We apply a cross-correlation technique adapted from particle imaging velocimetry (PIV) to the acoustic backscatter images. Temporal and spatial drift patterns of the bubbles are assessed and are shown to match very well to measured and theoretical rise patterns. The application of this processing to our field data gives clear results with respect to unambiguous bubble detection and remote bubble rise velocimetry. The method can identify and exclude the main source of misinterpretations, i.e. fish-mediated echoes. Although image-based cross-correlation techniques are well known in the field of fluid mechanics for high resolution and non-inversive current flow field analysis, we present the first application of this technique as an acoustic bubble detector.

Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics.

PubMed

Bergauer, Kristin; Fernandez-Guerra, Antonio; Garcia, Juan A L; Sprenger, Richard R; Stepanauskas, Ramunas; Pachiadaki, Maria G; Jensen, Ole N; Herndl, Gerhard J

2018-01-16

The phylogenetic composition of the heterotrophic microbial community is depth stratified in the oceanic water column down to abyssopelagic layers. In the layers below the euphotic zone, it has been suggested that heterotrophic microbes rely largely on solubilized particulate organic matter as a carbon and energy source rather than on dissolved organic matter. To decipher whether changes in the phylogenetic composition with depth are reflected in changes in the bacterial and archaeal transporter proteins, we generated an extensive metaproteomic and metagenomic dataset of microbial communities collected from 100- to 5,000-m depth in the Atlantic Ocean. By identifying which compounds of the organic matter pool are absorbed, transported, and incorporated into microbial cells, intriguing insights into organic matter transformation in the deep ocean emerged. On average, solute transporters accounted for 23% of identified protein sequences in the lower euphotic and ∼39% in the bathypelagic layer, indicating the central role of heterotrophy in the dark ocean. In the bathypelagic layer, substrate affinities of expressed transporters suggest that, in addition to amino acids, peptides and carbohydrates, carboxylic acids and compatible solutes may be essential substrates for the microbial community. Key players with highest expression of solute transporters were Alphaproteobacteria, Gammaproteobacteria, and Deltaproteobacteria, accounting for 40%, 11%, and 10%, respectively, of relative protein abundances. The in situ expression of solute transporters indicates that the heterotrophic prokaryotic community is geared toward the utilization of similar organic compounds throughout the water column, with yet higher abundances of transporters targeting aromatic compounds in the bathypelagic realm. Copyright © 2018 the Author(s). Published by PNAS.

Organic matter processing by microbial communities throughout the Atlantic water column as revealed by metaproteomics

PubMed Central

Bergauer, Kristin; Fernandez-Guerra, Antonio; Garcia, Juan A. L.; Sprenger, Richard R.; Stepanauskas, Ramunas; Pachiadaki, Maria G.; Herndl, Gerhard J.

2018-01-01

The phylogenetic composition of the heterotrophic microbial community is depth stratified in the oceanic water column down to abyssopelagic layers. In the layers below the euphotic zone, it has been suggested that heterotrophic microbes rely largely on solubilized particulate organic matter as a carbon and energy source rather than on dissolved organic matter. To decipher whether changes in the phylogenetic composition with depth are reflected in changes in the bacterial and archaeal transporter proteins, we generated an extensive metaproteomic and metagenomic dataset of microbial communities collected from 100- to 5,000-m depth in the Atlantic Ocean. By identifying which compounds of the organic matter pool are absorbed, transported, and incorporated into microbial cells, intriguing insights into organic matter transformation in the deep ocean emerged. On average, solute transporters accounted for 23% of identified protein sequences in the lower euphotic and ∼39% in the bathypelagic layer, indicating the central role of heterotrophy in the dark ocean. In the bathypelagic layer, substrate affinities of expressed transporters suggest that, in addition to amino acids, peptides and carbohydrates, carboxylic acids and compatible solutes may be essential substrates for the microbial community. Key players with highest expression of solute transporters were Alphaproteobacteria, Gammaproteobacteria, and Deltaproteobacteria, accounting for 40%, 11%, and 10%, respectively, of relative protein abundances. The in situ expression of solute transporters indicates that the heterotrophic prokaryotic community is geared toward the utilization of similar organic compounds throughout the water column, with yet higher abundances of transporters targeting aromatic compounds in the bathypelagic realm. PMID:29255014

Microbial Community Composition, Functions, and Activities in the Gulf of Mexico 1 Year after the Deepwater Horizon Accident

PubMed Central

Yergeau, Etienne; Maynard, Christine; Sanschagrin, Sylvie; Champagne, Julie; Juck, David; Lee, Kenneth

2015-01-01

Several studies have assessed the effects of the released oil on microbes, either during or immediately after the Deepwater Horizon accident. However, little is known about the potential longer-term persistent effects on microbial communities and their functions. In this study, one water column station near the wellhead (3.78 km southwest of the wellhead), one water column reference station outside the affected area (37.77 km southeast of the wellhead), and deep-sea sediments near the wellhead (3.66 km southeast of the wellhead) were sampled 1 year after the capping of the well. In order to analyze microbial community composition, function, and activity, we used metagenomics, metatranscriptomics, and mineralization assays. Mineralization of hexadecane was significantly higher at the wellhead station at a depth of ∼1,200 m than at the reference station. Community composition based on taxonomical or functional data showed that the samples taken at a depth of ∼1,200 m were significantly more dissimilar between the stations than at other depths (surface, 100 m, 750 m, and >1,500 m). Both Bacteria and Archaea showed reduced activity at depths of ∼1,200 m when the wellhead station was compared to the reference station, and their activity was significantly higher in surficial sediments than in 10-cm sediments. Surficial sediments also harbored significantly different active genera than did 5- and 10-cm sediments. For the remaining microbial parameters assessed, no significant differences could be observed between the wellhead and reference stations and between surface and 5- to 10-cm-deep sediments. PMID:26092461

The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling.

PubMed

Mehrshad, Maliheh; Rodriguez-Valera, Francisco; Amoozegar, Mohammad Ali; López-García, Purificación; Ghai, Rohit

2018-03-01

The dark ocean microbiota represents the unknown majority in the global ocean waters. The SAR202 cluster belonging to the phylum Chloroflexi was the first microbial lineage discovered to specifically inhabit the aphotic realm, where they are abundant and globally distributed. The absence of SAR202 cultured representatives is a significant bottleneck towards understanding their metabolic capacities and role in the marine environment. In this work, we use a combination of metagenome-assembled genomes from deep-sea datasets and publicly available single-cell genomes to construct a genomic perspective of SAR202 phylogeny, metabolism and biogeography. Our results suggest that SAR202 cluster members are medium sized, free-living cells with a heterotrophic lifestyle, broadly divided into two distinct clades. We present the first evidence of vertical stratification of these microbes along the meso- and bathypelagic ocean layers. Remarkably, two distinct species of SAR202 cluster are highly abundant in nearly all deep bathypelagic metagenomic datasets available so far. SAR202 members metabolize multiple organosulfur compounds, many appear to be sulfite-oxidizers and are predicted to play a major role in sulfur turnover in the dark water column. This concomitantly suggests an unsuspected availability of these nutrient sources to allow for the high abundance of these microbes in the deep sea.

Enhanced particle fluxes and heterotrophic bacterial activities in Gulf of Mexico bottom waters following storm-induced sediment resuspension

NASA Astrophysics Data System (ADS)

Ziervogel, K.; Dike, C.; Asper, V.; Montoya, J.; Battles, J.; D`souza, N.; Passow, U.; Diercks, A.; Esch, M.; Joye, S.; Dewald, C.; Arnosti, C.

2016-07-01

Bottom nepheloid layers (BNLs) in the deep sea transport and remobilize considerable amounts of particulate matter, enhancing microbial cycling of organic matter in cold, deep water environments. We measured bacterial abundance, bacterial protein production, and activities of hydrolytic enzymes within and above a BNL that formed in the deep Mississippi Canyon, northern Gulf of Mexico, shortly after Hurricane Isaac had passed over the study area in late August 2012. The BNL was detected via beam attenuation in CTD casts over an area of at least 3.5 km2, extending up to 200 m above the seafloor at a water depth of 1500 m. A large fraction of the suspended matter in the BNL consisted of resuspended sediments, as indicated by high levels of lithogenic material collected in near-bottom sediment traps shortly before the start of our sampling campaign. Observations of suspended particle abundance and sizes throughout the water column, using a combined camera-CTD system (marine snow camera, MSC), revealed the presence of macroaggregates (>1 mm in diameter) within the BNL, indicating resuspension of canyon sediments. A distinct bacterial response to enhanced particle concentrations within the BNL was evident from the observation that the highest enzymatic activities (peptidase, β-glucosidase) and protein production (3H-leucine incorporation) were found within the most particle rich sections of the BNL. To investigate the effects of enhanced particle concentrations on bacterial activities in deep BNLs more directly, we conducted laboratory experiments with roller bottles filled with bottom water and amended with experimentally resuspended sediments from the study area. Macroaggregates formed within 1 day from resuspended sediments; by day 4 of the incubation bacterial cell numbers in treatments with resuspended sediments were more than twice as high as in those lacking sediment suspensions. Cell-specific enzymatic activities were also generally higher in the sediment-amended compared to the unamended treatments. The broader range and higher activities of polysaccharide hydrolases in the presence of resuspended sediments compared to the unamended water reflected enzymatic capabilities typical for benthic bacteria. Our data suggest that the formation of BNLs in the deep Gulf of Mexico can lead to transport of sedimentary organic matter into bottom waters, stimulating bacterial food web interactions. Such storm-induced resuspension may represent a possible mechanism for the redistribution of sedimented oil-fallout from the Deepwater Horizon spill in 2010.

A protocol for assessing the effectiveness of oil spill dispersants in stimulating the biodegradation of oil.

PubMed

Prince, Roger C; Butler, Josh D

2014-01-01

Dispersants are important tools in oil spill response. Taking advantage of the energy in even small waves, they disperse floating oil slicks into tiny droplets (<70 μm) that entrain in the water column and drift apart so that they do not re-agglomerate to re-form a floating slick. The dramatically increased surface area allows microbial access to much more of the oil, and diffusion and dilution lead to oil concentrations where natural background levels of biologically available oxygen, nitrogen, and phosphorus are sufficient for microbial growth and oil consumption. Dispersants are only used on substantial spills in relatively deep water (usually >10 m), conditions that are impossible to replicate in the laboratory. To date, laboratory experiments aimed at following the biodegradation of dispersed oil usually show only minimal stimulation of the rate of biodegradation, but principally because the oil in these experiments disperses fairly effectively without dispersant. What is needed is a test protocol that allows comparison between an untreated slick that remains on the water surface during the entire biodegradation study and dispersant-treated oil that remains in the water column as small dispersed oil droplets. We show here that when this is accomplished, the rate of biodegradation is dramatically stimulated by an effective dispersant, Corexit 9500. Further development of this approach might result in a useful tool for comparing the full benefits of different dispersants.

Subsurface North Atlantic warming as a trigger of rapid cooling events: evidence from the early Pleistocene (MIS 31-19)

NASA Astrophysics Data System (ADS)

Hernández-Almeida, I.; Sierro, F.-J.; Cacho, I.; Flores, J.-A.

2015-04-01

Subsurface water column dynamics in the subpolar North Atlantic were reconstructed in order to improve the understanding of the cause of abrupt ice-rafted detritus (IRD) events during cold periods of the early Pleistocene. We used paired Mg / Ca and δ18O measurements of Neogloboquadrina pachyderma (sinistral - sin.), deep-dwelling planktonic foraminifera, to estimate the subsurface temperatures and seawater δ18O from a sediment core from Gardar Drift, in the subpolar North Atlantic. Carbon isotopes of benthic and planktonic foraminifera from the same site provide information about the ventilation and water column nutrient gradient. Mg / Ca-based temperatures and seawater δ18O suggest increased subsurface temperatures and salinities during ice-rafting, likely due to northward subsurface transport of subtropical waters during periods of weaker Atlantic Meridional Overturning Circulation (AMOC). Planktonic carbon isotopes support this suggestion, showing coincident increased subsurface ventilation during deposition of IRD. Subsurface accumulation of warm waters would have resulted in basal warming and break-up of ice-shelves, leading to massive iceberg discharges in the North Atlantic. The release of heat stored at the subsurface to the atmosphere would have helped to restart the AMOC. This mechanism is in agreement with modelling and proxy studies that observe a subsurface warming in the North Atlantic in response to AMOC slowdown during Marine Isotope Stage (MIS) 3.

Improved Visualization of Hydroacoustic Plumes Using the Split-Beam Aperture Coherence.

PubMed

Blomberg, Ann E A; Weber, Thomas C; Austeng, Andreas

2018-06-25

Natural seepage of methane into the oceans is considerable, and plays a role in the global carbon cycle. Estimating the amount of this greenhouse gas entering the water column is important in order to understand their environmental impact. In addition, leakage from man-made structures such as gas pipelines may have environmental and economical consequences and should be promptly detected. Split beam echo sounders (SBES) detect hydroacoustic plumes due to the significant contrast in acoustic impedance between water and free gas. SBES are also powerful tools for plume characterization, with the ability to provide absolute acoustic measurements, estimate bubble trajectories, and capture the frequency dependent response of bubbles. However, under challenging conditions such as deep water and considerable background noise, it can be difficult to detect the presence of gas seepage from the acoustic imagery alone. The spatial coherence of the wavefield measured across the split beam sectors, quantified by the coherence factor (CF), is a computationally simple, easily available quantity which complements the acoustic imagery and may ease the ability to automatically or visually detect bubbles in the water column. We demonstrate the benefits of CF processing using SBES data from the Hudson Canyon, acquired using the Simrad EK80 SBES. We observe that hydroacoustic plumes appear more clearly defined and are easier to detect in the CF imagery than in the acoustic backscatter images.

Ten Years of Observatory Science from Saanich Inlet on the VENUS Cabled Ocean Observatory

NASA Astrophysics Data System (ADS)

Dewey, R. K.; Tunnicliffe, V.; Macoun, P.; Round, A.

2016-02-01

The Saanich Inlet array of the VENUS cabled ocean observatory, maintained and operated by Ocean Networks Canada, was installed in February 2006, and in 2016 will have supported ten years of comprehensive interactive science. Representing the first in the present generation of cabled observing technologies, this coastal array has provided continuous high power and broadband communications to a variety of instrument platforms, hundreds of sensors, and enabled dozens of short, medium, and long-term studies. Saanich Inlet is a protected fjord with limited tidal action, resulting in an extremely productive environment, with strong seasonal chemical variations driven by episodic deep water renewal events and oxygen reduction processes. The breadth of the research has included microbial and benthic community dynamics, biogeochemical cycles, forensics, quantifying inter-annual variations, benthic-pelagic coupling, sensor testing, plankton dynamics, and bio-turbulence. Observatory measurements include core water properties (CTD & O2) and water-column echo-sounder records, as well as experiment-oriented deployments utilizing cameras, Gliders, Dopplers, hydrophones, and a variety of biogeochemical sensors. With a recently installed Buoy Profiler System for monitoring the entire water column, community plans continue with a dedicated Redox experiment through the 2016-17 seasons. Highlights from the dozens of research papers and theses will be presented to demonstrate the achievements enabled by a comprehensive coastal cabled observing system.

Vertically distinct microbial communities in the Mariana and Kermadec trenches

PubMed Central

Donaldson, Sierra; Osuntokun, Oladayo; Xia, Qing; Nelson, Alex; Blanton, Jessica; Allen, Eric E.; Church, Matthew J.; Bartlett, Douglas H.

2018-01-01

Hadal trenches, oceanic locations deeper than 6,000 m, are thought to have distinct microbial communities compared to those at shallower depths due to high hydrostatic pressures, topographical funneling of organic matter, and biogeographical isolation. Here we evaluate the hypothesis that hadal trenches contain unique microbial biodiversity through analyses of the communities present in the bottom waters of the Kermadec and Mariana trenches. Estimates of microbial protein production indicate active populations under in situ hydrostatic pressures and increasing adaptation to pressure with depth. Depth, trench of collection, and size fraction are important drivers of microbial community structure. Many putative hadal bathytypes, such as members related to the Marinimicrobia, Rhodobacteraceae, Rhodospirilliceae, and Aquibacter, are similar to members identified in other trenches. Most of the differences between the two trench microbiomes consists of taxa belonging to the Gammaproteobacteria whose distributions extend throughout the water column. Growth and survival estimates of representative isolates of these taxa under deep-sea conditions suggest that some members may descend from shallower depths and exist as a potentially inactive fraction of the hadal zone. We conclude that the distinct pelagic communities residing in these two trenches, and perhaps by extension other trenches, reflect both cosmopolitan hadal bathytypes and ubiquitous genera found throughout the water column. PMID:29621268

Quadruple sulfur isotope constraints on the origin and cycling of volatile organic sulfur compounds in a stratified sulfidic lake

NASA Astrophysics Data System (ADS)

Oduro, Harry; Kamyshny, Alexey; Zerkle, Aubrey L.; Li, Yue; Farquhar, James

2013-11-01

We have quantified the major forms of volatile organic sulfur compounds (VOSCs) distributed in the water column of stratified freshwater Fayetteville Green Lake (FGL), to evaluate the biogeochemical pathways involved in their production. The lake's anoxic deep waters contain high concentrations of sulfate (12-16 mmol L-1) and sulfide (0.12 μmol L-1 to 1.5 mmol L-1) with relatively low VOSC concentrations, ranging from 0.1 nmol L-1 to 2.8 μmol L-1. Sulfur isotope measurements of combined volatile organic sulfur compounds demonstrate that VOSC species are formed primarily from reduced sulfur (H2S/HS-) and zero-valent sulfur (ZVS), with little input from sulfate. Thedata support a role of a combination of biological and abiotic processes in formation of carbon-sulfur bonds between reactive sulfur species and methyl groups of lignin components. These processes are responsible for very fast turnover of VOSC species, maintaining their low levels in FGL. No dimethylsulfoniopropionate (DMSP) was detected by Electrospray Ionization Mass Spectrometry (ESI-MS) in the lake water column or in planktonic extracts. These observations indicate a pathway distinct from oceanic and coastal marine environments, where dimethylsulfide (DMS) and other VOSC species are principally produced via the breakdown of DMSP by plankton species.

Occurrence and origin of Escherichia coli in water and sediments at two public swimming beaches at Lake of the Ozarks State Park, Camden County, Missouri, 2011-13

USGS Publications Warehouse

Wilson, Jordan L.; Schumacher, John G.; Burken, Joel G.

2014-01-01

In the past several years, the Missouri Department of Natural Resources has closed two popular public beaches, Grand Glaize Beach and Public Beach 1, at Lake of the Ozarks State Park in Osage Beach, Missouri when monitoring results exceeded the established Escherichia coli (E. coli) standard. As a result of the beach closures, the U.S. Geological Survey and Missouri University of Science and Technology, in cooperation with the Missouri Department of Natural Resources, led an investigation into the occurrence and origins of E. coli at Grand Glaize Beach and Public Beach 1. The study included the collection of more than 1,300 water, sediment, and fecal source samples between August 2011 and February 2013 from the two beaches and vicinity. Spatial and temporal patterns of E. coli concentrations in water and sediments combined with measurements of environmental variables, beach-use patterns, and Missouri Department of Natural Resources water-tracing results were used to identify possible sources of E. coli contamination at the two beaches and to corroborate microbial source tracking (MST) sampling efforts. Results from a 2011 reconnaissance sampling indicate that water samples from Grand Glaize Beach cove contained significantly larger E. coli concentrations than adjacent coves and were largest at sites at the upper end of Grand Glaize Beach cove, indicating a probable local source of E. coli contamination within the upper end of the cove. Results from an intensive sampling effort during 2012 indicated that E. coli concentrations in water samples at Grand Glaize Beach cove were significantly larger in ankle-deep water than waist-deep water, trended downward during the recreational season, significantly increased with an increase in the total number of bathers at the beach, and were largest during the middle of the day. Concentrations of E. coli in nearshore sediment (sediment near the shoreline) at Grand Glaize Beach were significantly larger in foreshore samples (samples collected above the shoreline) than in samples collected in ankle-deep water below the shoreline, significantly larger in the left and middle areas of the beach than the right area, and substantially larger than similar studies at E. coli- contaminated beaches on Lake Erie in Ohio. Concentrations of E. coli in the water column also were significantly larger after resuspension of sediments. Results of MST indicate a predominance of waterfowl-associated markers in nearshore sediments at Grand Glaize Beach consistent with frequent observations of goose and vulture fecal matter in sediment, especially on the left and middle areas of the beach. The combination of spatial and temporal sampling and MST indicate that an important source of E. coli contamination at Grand Glaize Beach during 2012 was E. coli released into the water column by bathers resuspending E. coli-contaminated sediments, especially during high-use days early in the recreational season.

Updating temperature and salinity mean values and trends in the Western Mediterranean: The RADMED project

NASA Astrophysics Data System (ADS)

Vargas-Yáñez, M.; García-Martínez, M. C.; Moya, F.; Balbín, R.; López-Jurado, J. L.; Serra, M.; Zunino, P.; Pascual, J.; Salat, J.

2017-09-01

The RADMED project is devoted to the implementation and maintenance of a multidisciplinary monitoring system around the Spanish Mediterranean waters. This observing system is based on periodic multidisciplinary cruises covering the coastal waters, continental shelf and slope waters and some deep stations (>2000 m) from the Westernmost Alboran Sea to Barcelona in the Catalan Sea, including the Balearic Islands. This project was launched in 2007 unifying and extending some previous monitoring projects which had a more reduced geographical coverage. Some of the time series currently available extend from 1992, while the more recent ones were initiated in 2007. The present work updates the available time series up to 2015 (included) and shows the capability of these time series for two main purposes: the calculation of mean values for the properties of main water masses around the Spanish Mediterranean, and the study of the interannual and decadal variability of such properties. The data set provided by the RADMED project has been merged with historical data from the MEDAR/MEDATLAS data base for the calculation of temperature and salinity trends from 1900 to 2015. The analysis of these time series shows that the intermediate and deep layers of the Western Mediterranean have increased their temperature and salinity with an acceleration of the warming and salting trends from 1943. Trends for the heat absorbed by the water column for the 1943-2015 period, range between 0.2 and 0.6 W/m2 depending on the used methodology. The temperature and salinity trends for the same period and for the intermediate layer are 0.002 °C/yr and 0.001 yr-1 respectively. Deep layers warmed and increased their salinity at a rate of 0.004 °C/yr and 0.001 yr-1.

A global ocean inventory of anthropogenic mercury based on water column measurements.

PubMed

Lamborg, Carl H; Hammerschmidt, Chad R; Bowman, Katlin L; Swarr, Gretchen J; Munson, Kathleen M; Ohnemus, Daniel C; Lam, Phoebe J; Heimbürger, Lars-Eric; Rijkenberg, Micha J A; Saito, Mak A

2014-08-07

Mercury is a toxic, bioaccumulating trace metal whose emissions to the environment have increased significantly as a result of anthropogenic activities such as mining and fossil fuel combustion. Several recent models have estimated that these emissions have increased the oceanic mercury inventory by 36-1,313 million moles since the 1500s. Such predictions have remained largely untested owing to a lack of appropriate historical data and natural archives. Here we report oceanographic measurements of total dissolved mercury and related parameters from several recent expeditions to the Atlantic, Pacific, Southern and Arctic oceans. We find that deep North Atlantic waters and most intermediate waters are anomalously enriched in mercury relative to the deep waters of the South Atlantic, Southern and Pacific oceans, probably as a result of the incorporation of anthropogenic mercury. We estimate the total amount of anthropogenic mercury present in the global ocean to be 290 ± 80 million moles, with almost two-thirds residing in water shallower than a thousand metres. Our findings suggest that anthropogenic perturbations to the global mercury cycle have led to an approximately 150 per cent increase in the amount of mercury in thermocline waters and have tripled the mercury content of surface waters compared to pre-anthropogenic conditions. This information may aid our understanding of the processes and the depths at which inorganic mercury species are converted into toxic methyl mercury and subsequently bioaccumulated in marine food webs.

Theory of Semiconducting Superlattices and Microstructures

DTIC Science & Technology

1992-03-01

theory elucidated the various factors affecting deep levels, sets forth the conditions for obtaining shallow-deep transitions, and predicts that Si (a...theory elucidates the various factors affecting deep levels, sets forth the conditions for obtaining shallow-deep transitions, and predicts that Si (a...ondenotes the anion vacancy, which can be thought any quantitative theoretical factor are theof as originating from Column-O of the Period strengths of

A case study of convectively sourced water vapor observed in the overworld stratosphere over the United States

NASA Astrophysics Data System (ADS)

Smith, Jessica B.; Wilmouth, David M.; Bedka, Kristopher M.; Bowman, Kenneth P.; Homeyer, Cameron R.; Dykema, John A.; Sargent, Maryann R.; Clapp, Corey E.; Leroy, Stephen S.; Sayres, David S.; Dean-Day, Jonathan M.; Paul Bui, T.; Anderson, James G.

2017-09-01

On 27 August 2013, during the Studies of Emissions and Atmospheric Composition, Clouds and Climate Coupling by Regional Surveys field mission, NASA's ER-2 research aircraft encountered a region of enhanced water vapor, extending over a depth of approximately 2 km and a minimum areal extent of 20,000 km2 in the stratosphere (375 K to 415 K potential temperature), south of the Great Lakes (42°N, 90°W). Water vapor mixing ratios in this plume, measured by the Harvard Water Vapor instrument, constitute the highest values recorded in situ at these potential temperatures and latitudes. An analysis of geostationary satellite imagery in combination with trajectory calculations links this water vapor enhancement to its source, a deep tropopause-penetrating convective storm system that developed over Minnesota 20 h prior to the aircraft plume encounter. High resolution, ground-based radar data reveal that this system was composed of multiple individual storms, each with convective turrets that extended to a maximum of 4 km above the tropopause level for several hours. In situ water vapor data show that this storm system irreversibly delivered between 6.6 kt and 13.5 kt of water to the stratosphere. This constitutes a 20-25% increase in water vapor abundance in a column extending from 115 hP to 70 hPa over the plume area. Both in situ and satellite climatologies show a high frequency of localized water vapor enhancements over the central U.S. in summer, suggesting that deep convection can contribute to the stratospheric water budget over this region and season.

Carbonate system parameters and anthropogenic CO2 in the North Aegean Sea during October 2013

NASA Astrophysics Data System (ADS)

Krasakopoulou, E.; Souvermezoglou, E.; Giannoudi, L.; Goyet, C.

2017-10-01

Data of AT (total alkalinity) and CT (total inorganic carbon) collected during October 2013, on a N-S transect crossing the North of Lemnos basin allowed to identify the peculiarities of the CO2 system in the North Aegean Sea and estimate the anthropogenic CO2 (CANT) concentrations. Extremely high concentrations of AT and CT were recorded in the upper layer of the North Aegean reflecting the high loads of AT and CT by the brackish BSW (Black Sea Water) outflowing through the Dardanelles strait and by the rivers runoff. Both AT and CT exhibit strong negative linear correlation with salinity in the upper layer (0-20 m). Investigation of the AT-S relationship along with the salinity adjustment of AT revealed excess alkalinity throughout the water column in relation to the surface waters implying a possible occurrence of non-carbonate alkalinity inputs as well as of other processes that take place probably over the extended shelves and contribute to the alkalinity surplus. The intermediate layer occupied by the Modified Levantine Intermediate Water (MLIW) mass exhibits the lowest CT and AT concentrations, while rather elevated AT and CT concentrations characterize the North Aegean Deep Water (NAgDW) mass filling the deep layer of the North of Lemnos basin linked to previous dense water formation episodes. High anthropogenic CO2 content was detected at intermediate and deep layers of the North Aegean reflecting the effective transportation of the absorbed atmospheric CO2 from the surface to the deeper waters via the dense water formation episodes. The MLIW layer is more affected by the penetration of CANT than the NAgDW that fills the deep part of the basin. The observed variability of CANT distribution reflects the influence of the intensity of dense water formation events, of the different θ/S properties of the newly formed dense waters as well as of the diverse submarine pathways followed by the cascading dense waters. The invasion of CANT has lead to more acidic conditions and to lower saturation degree of calcium carbonate in relation to the preindustrial era. The findings of this study provide baseline information about the carbonate system properties of the North Aegean and highlight its active role in sequestering and storing anthropogenic CO2.

Bringing OTEC Environmental Assessments of the 1980s Up To 21st Century Oceanographic Standards (Invited)

NASA Astrophysics Data System (ADS)

Sansone, F. J.; Comfort, C. M.; Weng, K. C.

2010-12-01

Although the potential environmental effects of OTEC plant construction and operation were evaluated in the 1980s as part of earlier OTEC development, recent OTEC efforts have led to the re-examination of the issues involved. During the intervening years we have significantly increased our understanding of the oceans, and our ability to observe and model the marine environment has improved markedly. For example, OTEC environmental assessments have traditionally included the effects of discharging deep seawater, with its elevated levels of dissolved inorganic nutrients and dissolved inorganic carbon, and depleted levels of dissolved oxygen, into the upper water column. However, the role of trace elements in controlling marine primary production rates is now widely accepted, and their natural vertical distribution in the ocean needs to be considered. Our expanded understanding of ocean biogeochemistry also makes environmental assessment more complicated. For example, discharges of deep seawater within the photic zone of the ocean, but below the surface mixed layer, should result in photosynthetic production that would remove both dissolved nutrients and dissolved carbon dioxide at approximately the same stoichiometric ratio as they are elevated in deep seawater; thus, the only large-scale related environmental impact would involve the fate of the resulting photosynthetically produced organic matter. Similarly, our improved knowledge of marine physical chemistry allows a better understanding of OTEC’s potential impact on the ocean’s inorganic carbon chemistry. For example, the reduction in pressure of deep seawater as it is brought to the surface, and the increase in temperature due to OTEC heat exchange, will both lead to an increase in the deep water’s pH; opposite effects will occur in the shallow seawater used by OTEC. Determination of the net effect will require modeling using predicted pumping rates for warm and cold seawater, the planned intake and discharge depths and temperatures, the inorganic carbon chemistry at the specific site, and recently refined inorganic carbon equilibria data. Ecological data (e.g., primary productivity, the biomass of various trophic levels, biota attraction to floating objects, etc.) should also be updated with the results from more contemporary studies. Additional factors that should be examined include electromagnetic effects of cabling, alterations in the bio-physical coupling of water column as a result of the discharge plume, potential harmful algal bloom development, and low-frequency noise production. Moreover, new ocean observation techniques such as gliders and AUVs allow large areas of the ocean to be monitored in 3-D for extended periods of time. Similarly, new marine modeling techniques, such as regional ocean modeling systems (ROMS), allow OTEC plumes to be studied in the context of a 3-D dynamic ocean, including such features as internal tides and mesoscales eddies, and allow assimilation of 3-D data to improve model performance. As an early step in these efforts, we have used HOT time-series data to determine patterns of seasonal variability in the upper ocean (warm water intake and discharge zone) and in the deep ocean (cold water uptake) near the site for the proposed Kahe Point, Oahu OTEC demonstration plant.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bech, H.; Haugsen, P.B.

The Norwegian Oil Company, Saga Petroleum a.s., is operator on two promising deep water blocks in the Norwegian sector of the North Sea. As a result, the company has introduced a new platform concept designed specifically for hostile and deep water areas. The platform idea is the result of a systematic innovation procedure. The first step was to analyze and describe the functions of the different structural elements on a general basis. Next was to analyze how these elements contributed to the total concept. The final development stage was to create a new solution. The resulting (hybrid platform design conceptmore » appears to offer a number of inherent deck layout and towout deck weight advantages). The concrete substructure is a lower unit consisting of a foundation with concrete skirts that will penetrate the soft soil in the seabed and a high concrete caisson extending up from the foundation, which is made up of seven cells with varying concrete thicknesses, terminating in domes. The upper steel platform section is a lattice-type jacket structure. There is a separate column for internal personnel access between the platform deck and the concrete caisson.« less

Dissolution of methane bubbles with hydrate armoring in deep ocean conditions

NASA Astrophysics Data System (ADS)

Kovalchuk, Margarita; Socolofsky, Scott

2017-11-01

The deep ocean is a storehouse of natural gas. Methane bubble moving upwards from marine sediments may become trapped in gas hydrates. It is uncertain precisely how hydrate armoring affects dissolution, or mass transfer from the bubble to the surrounding water column. The Texas A&M Oilspill Calculator was used to simulate a series of gas bubble dissolution experiments conducted in the United States Department of Energy National Energy Technology Laboratory High Pressure Water Tunnel. Several variations of the mass transfer coefficient were calculated based on gas or hydrate phase solubility and clean or dirty bubble correlations. Results suggest the mass transfer coefficient may be most closely modeled with gas phase solubility and dirty bubble correlation equations. Further investigation of hydrate bubble dissolution behavior will refine current numeric models which aid in understanding gas flux to the atmosphere and plumes such as oil spills. Research funded in part by the Texas A&M University 2017 Undergraduate Summer Research Grant and a Grant from the Methane Gas Hydrates Program of the US DOE National Energy Technology Laboratory.

Bathymetric and oceanic controls on Abbot Ice Shelf thickness and stability

NASA Astrophysics Data System (ADS)

Cochran, J. R.; Jacobs, S. S.; Tinto, K. J.; Bell, R. E.

2014-05-01

Ice shelves play key roles in stabilizing Antarctica's ice sheets, maintaining its high albedo and returning freshwater to the Southern Ocean. Improved data sets of ice shelf draft and underlying bathymetry are important for assessing ocean-ice interactions and modeling ice response to climate change. The long, narrow Abbot Ice Shelf south of Thurston Island produces a large volume of meltwater, but is close to being in overall mass balance. Here we invert NASA Operation IceBridge (OIB) airborne gravity data over the Abbot region to obtain sub-ice bathymetry, and combine OIB elevation and ice thickness measurements to estimate ice draft. A series of asymmetric fault-bounded basins formed during rifting of Zealandia from Antarctica underlie the Abbot Ice Shelf west of 94° W and the Cosgrove Ice Shelf to the south. Sub-ice water column depths along OIB flight lines are sufficiently deep to allow warm deep and thermocline waters observed near the western Abbot ice front to circulate through much of the ice shelf cavity. An average ice shelf draft of ~200 m, 15% less than the Bedmap2 compilation, coincides with the summer transition between the ocean surface mixed layer and upper thermocline. Thick ice streams feeding the Abbot cross relatively stable grounding lines and are rapidly thinned by the warmest inflow. While the ice shelf is presently in equilibrium, the overall correspondence between draft distribution and thermocline depth indicates sensitivity to changes in characteristics of the ocean surface and deep waters.

Biodiversity's Big Wet Secret: The Global Distribution of Marine Biological Records Reveals Chronic Under-Exploration of the Deep Pelagic Ocean

PubMed Central

Webb, Thomas J.; Vanden Berghe, Edward; O'Dor, Ron

2010-01-01

Background Understanding the distribution of marine biodiversity is a crucial first step towards the effective and sustainable management of marine ecosystems. Recent efforts to collate location records from marine surveys enable us to assemble a global picture of recorded marine biodiversity. They also effectively highlight gaps in our knowledge of particular marine regions. In particular, the deep pelagic ocean – the largest biome on Earth – is chronically under-represented in global databases of marine biodiversity. Methodology/Principal Findings We use data from the Ocean Biogeographic Information System to plot the position in the water column of ca 7 million records of marine species occurrences. Records from relatively shallow waters dominate this global picture of recorded marine biodiversity. In addition, standardising the number of records from regions of the ocean differing in depth reveals that regardless of ocean depth, most records come either from surface waters or the sea bed. Midwater biodiversity is drastically under-represented. Conclusions/Significance The deep pelagic ocean is the largest habitat by volume on Earth, yet it remains biodiversity's big wet secret, as it is hugely under-represented in global databases of marine biological records. Given both its value in the provision of a range of ecosystem services, and its vulnerability to threats including overfishing and climate change, there is a pressing need to increase our knowledge of Earth's largest ecosystem. PMID:20689845

Unraveling the Mysteries of Océano Profundo: New organisms, ecosystems and geohazards in deep water around Puerto Rico

NASA Astrophysics Data System (ADS)

Cantwell, K. L.; Kennedy, B. R.; Quattrini, A.; Cheadle, M. J.; Sowers, D.; Lobecker, E.; Ford, M.; Garcia-Moliner, G.; Gray, L. M.; Chaytor, J. D.; Demopoulos, A. W.

2016-02-01

From February to April 2015, NOAA Ship Okeanos Explorer, America's Ship for Ocean Exploration, surveyed unknown deep-sea ecosystems and potential geohazards off the coast of Puerto Rico and the US Virgin Islands. Over 37,500 km² of high-resolution multibeam sonar data was collected, revealing rugged canyons along shelf breaks, intricate incised channels, and large slumps and slope failures. Twelve remotely operated vehicle (ROV) dives, surveyed seamounts, escarpments, and submarine canyons at depths of 300-6,000 m. Additional ROV exploration of the water column occurred at depths of 800-1200 m. Dives included three of the deepest dives ever conducted in the Puerto Rico Trench and the first exploration of Exocet and Whiting seamounts. Discoveries included assemblages of deep-sea corals (>50 species), and observations of several rare and new species. For example, the seastar Laetmaster spectabilis had not been documented since its original description in 1881 and a new species of benthopelagic cydippid ctenophore was observed at 3900 m in the Aricebo Amphitheater. Other expedition highlights included two rarely observed blind octopods (Cirrothauma murrayi); novel observation of a symbiotic association between predatory tunicates with polychaete associates; and approximately 75 species of demersal fishes, including a new species of wrasse and the first records of Shaefer's anglerfish and the ateleopodid jellynose in Puerto Rican waters. ROV dives traversed elements of the complete geological succession from 1 km deep into the Cretaceous volcanic arc basement, across the carbonate platform sequence unconformity and into the uppermost Pliocene carbonates. Highlights included spectacular slope failure headwall scarps and sub-aerial karstic weathering of the youngest carbonates. All data collected during Océano Profundo 2015 are now publicly available through the National Archives and are awaiting further analysis by the scientific community.

Benthic nutrient fluxes in the Eastern Gotland Basin (Baltic Sea) with particular focus on microbial mat ecosystems

NASA Astrophysics Data System (ADS)

Noffke, A.; Sommer, S.; Dale, A. W.; Hall, P. O. J.; Pfannkuche, O.

2016-06-01

Benthic fluxes and water column distributions of dissolved inorganic nitrogen (DIN) and total dissolved phosphate (PO43 -) were measured in situ at 7 sites across a redox gradient from oxic to anoxic bottom waters in the Eastern Gotland Basin (Baltic Sea). The study area was divided into the oxic zone (60 to ca. 80 m water depth, O2 > 30 μM), the hypoxic transition zone (HTZ, ca. 80 to 120 m, O2 < 30 μM) and the deep anoxic and sulfidic basin (> ca. 120 m). Sediments in the HTZ were covered by mats of vacuolated sulfur bacteria. Ammonium (NH4+) fluxes in the deep basin and the HTZ were elevated at 0.6 mmol m- 2 d- 1 and 1 mmol m- 2 d- 1, respectively. Nitrate (NO3-) fluxes were directed into the sediment at all stations in the HTZ and were zero in the deep basin. PO43 - release was highest in the HTZ at 0.23 mmol m- 2 d- 1, with a further release of 0.2 mmol m- 2 d- 1 in the deep basin. Up-scaling the benthic fluxes to the Baltic Proper equals 109 kt yr- 1 of PO43 - and 266 kt yr- 1 of DIN. This is eight- and two-fold higher than the total external load of P (14 kt yr- 1) and DIN (140 kt yr- 1) in 2006 (HELCOM 2009b). The HTZ makes an important contribution to the internal nutrient loading in the Baltic Proper, releasing 70% of P (76 kt yr- 1) and 75% of DIN (200 kt yr- 1) despite covering only 51% of area.

Influence of bioassay volume, water column height, and octanol-water partition coefficient on the toxicity of pesticides to rainbow trout.

PubMed

Altinok, Ilhan; Capkin, Erol; Boran, Halis

2011-06-01

Effects of water volume and water column height on toxicity of cypermethrin, carbaryl, dichlorvos, tetradifon, maneb, captan, carbosulfan endosulfan and HgCl₂ to juvenile rainbow trout (Oncorhynchus mykiss, 3.2 ± 0.7 g) were evaluated in different glass aquaria under static conditions. When fish were exposed to the chemical compounds in 23 cm water column height (25 L), their mortality ranged between 0% and 58%. At the same water volume, but lower water column height (9 cm), mortality of fish increased significantly and was in a range from 60% to 95%. At the same water column height, toxic effects of chemicals were significantly higher in 25 L water volume than that of 8.5 L, water except maneb which has lowest (-0.45) octanol-water partition coefficient value. Mortality rates ratio of 9 and 23 cm water column height ranged between 1.12 and 90 while mortality rates ratio of 9 and 25 L water volume ranged between 1.20 and 4.0. Because actual exposure concentrations were not affected by either water volume or water column height, we propose that increased pesticides' toxicity was related to an increase in bioassay volume, since more pesticide molecules were able to interact with or accumulate the fish. However, there seem to be no relationship between the effects of water volume, water column height and Kow value of chemicals with regard to toxicity in juvenile rainbow trout.

On the nature of the Madagascar dipoles: An analysis from Argo profiling floats and altimetry measurements

NASA Astrophysics Data System (ADS)

Aguiar-González, Borja; Ponsoni, Leandro; Ridderinkhof, Herman; de Ruijter, Will P. M.; Maas, Leo R. M.

2016-04-01

The South East Madagascar Current (SEMC) flows poleward along the eastern coast of Madagascar as a western boundary current which further south provides some of the source waters of the Agulhas Current, either directly or in the form of eddies. We investigate the region of dipole formation south of Madagascar combining vertical T/S profiles from Argo floats, altimetry measurements and an existing eddy detection algorithm. Results from our analysis show that the dipole consists of an anticyclonic intrathermocline eddy (ITE) formed on its southern flank and a cyclonic ITE formed on its northern flank. Both lobes of the dipole exhibit similar T/S properties throughout the water column, although vertically shifted within the thermocline depending on its nature: upward in a cyclonic ITE and downward in an anticyclonic ITE. A subsurface salinity maximum of about 35.5 psu characterizes the upper layers with Subtropical Surface Water (STSW). At intermediate levels, a well defined path of South Indian Central Water (SICW) extends throughout the water column up to reach a minimum in salinity of 34.5 psu, corresponding to Antarctic Intermediate Water (AAIW). Below, at deep layers, the North Atlantic Deep Water (NADW) is found. The intrathermocline nature of the Madagascar dipoles has not been previously reported and represents an important feature to be considered when assessing the heat and salt fluxes driven by eddy movement and contributing to the Agulhas Current. Unlike surface eddies, intrathermocline eddies strongly influence the intermediate/deeper layers in the oceans and, hence, may have a larger contribution in the spreading rates and pathways of water masses. Because the intrathermocline nature of eddies is invisible to altimetry measurements, these results stress the importance of combining altimetry with historical records of Argo profiles which uncover eddy dynamics below the sea surface. Lastly, we further investigate from altimetry the area of dipole formation. The main axis of the SEMC appears flanked on its northern and southern borders by a semi-isolated semicircular region where kinetic energy of the mean flow is being transfered to the eddy kinetic energy field, in this case to the dipole formation, through barotropic instabilities without the need of an evident SEMC retroflection. In this regard, future work will be addressed to account for the mechanism by which Madagascar dipoles thus generated present an intrathermocline structure.

Low temperature hydrothermal maturation of organic matter in sediments from the Atlantis II Deep, Red Sea.

PubMed

Simoneit, B R; Grimalt, J O; Hayes, J M; Hartman, H

1987-01-01

Hydrocarbons and bulk organic matter of two sediment cores (No. 84 and 126, CHAIN 61 cruise) located within the Atlantis II Deep have been analyzed. Although the brines overlying the coring areas were reported to be sterile, microbial inputs and minor terrestrial sources the major sedimentary organic material. This input is derived from the upper water column above the brines. Both steroid and triterpenoid hydrocarbons show that extensive acid-catalyzed reactions are occurring in the sediments. In comparison with other hydrothermal (Guaymas Basin) or intrusive systems (Cape Verde Rise), the Atlantis II Deep exhibits a lower degree of thermal maturation. This is easily deduced from the elemental composition of the kerogens and the absence of polynuclear aromatic hydrocarbons of a pyrolytic origin in the bitumen. The lack of carbon number preference among the n-alkanes suggests, especially in the case of the long chain homologs, that the organic matter of Atlantis II Deep sediments has undergone some degree of catagenesis. However, the yields of hydrocarbons are much lower than those observed in other hydrothermal areas. The effect of lower temperature and poor source-rock characteristics appear to be responsible for the differences.

On polarimetric radar signatures of deep convection for model evaluation: columns of specific differential phase observed during MC3E

PubMed Central

van Lier-Walqui, Marcus; Fridlind, Ann M.; Ackerman, Andrew S.; Collis, Scott; Helmus, Jonathan; MacGorman, Donald R.; North, Kirk; Kollias, Pavlos; Posselt, Derek J.

2017-01-01

The representation of deep convection in general circulation models is in part informed by cloud-resolving models (CRMs) that function at higher spatial and temporal resolution; however, recent studies have shown that CRMs often fail at capturing the details of deep convection updrafts. With the goal of providing constraint on CRM simulation of deep convection updrafts, ground-based remote-sensing observations are analyzed and statistically correlated for four deep convection events observed during the Midlatitude Continental Convective Clouds Experiment (MC3E). Since positive values of specific differential phase (KDP) observed above the melting level are associated with deep convection updraft cells, so-called “KDP columns” are analyzed using two scanning polarimetric radars in Oklahoma: the National Weather Service Vance WSR-88D (KVNX) and the Department of Energy C-band Scanning Atmospheric Radiation Measurement (ARM) Precipitation Radar (C-SAPR). KVNX and C-SAPR KDP volumes and columns are then statistically correlated with vertical winds retrieved via multi-Doppler wind analysis, lightning flash activity derived from the Oklahoma Lightning Mapping Array, and KVNX differential reflectivity (ZDR). Results indicate strong correlations of KDP volume above the melting level with updraft mass flux, lightning flash activity, and intense rainfall. Analysis of KDP columns reveals signatures of changing updraft properties from one storm event to another as well as during event evolution. Comparison of ZDR to KDP shows commonalities in information content of each, as well as potential problems with ZDR associated with observational artifacts. PMID:29503466

Hydrological fine-structure evolution as a proxy of water mass property changes in the Tyrrhenian Sea

NASA Astrophysics Data System (ADS)

Durante, Sara; Schroeder, Katrin; Sparnocchia, Stefania; Mazzei, Luca; Borghini, Mireno; Pierini, Stefano

2017-04-01

The variability of the Tyrrhenian basin water masses properties, as inferred by the evolution of the typical step-like profile of the water column, is analyzed from 2003 to 2016. The dataset contains hydrological time series obtained in two deep control stations at a depth of about 3500 m. The study follows the evolution of double diffusion processes (a coherent basin feature) that leads to well-defined and permanent staircases. In each profile, four main steps can be recognized between 400 m and 2500 m both in conservative temperature (CT) and absolute salinity (SA), the main one having a thickness of about 400 m. The Tyrrhenian Sea is a not particularly dynamic basin if compared with other areas of the Mediterranean Sea, yet the staircases show large hydrological and depth changes. In particular, an increase of CT and SA and an uplifting are observed in the second part of the time series. Such changes can be due to both internal and external forcing. To discern the nature of the forcing, a suitable method [1] has been applied to our case study. Changes in SA are found to be similar along both isobars and neutral surfaces, so they can be ascribed to an external forcing. On the other hand, the CT shows different trends along isobars and neutral surfaces: this suggests that internal forcing can play an important role. The new Western Mediterranean Deep Water formed in severe winters after 2004-2005 and later in the Gulf of Lion (during the so-called Western Mediterranean Transition [2]) is suggested to be an external forcing producing the observed variability. Oscillatory movements of the neutral surfaces can also be observed after 2010. Computation of heat and salt fluxes (both for the whole water column and for each single step) sheds light on the conservative character of hydrological parameters of the step-system. [1] Bindoff, N.L., McDougall, T.J., 1994. J. Phys. Oceanogr. 24, 1137-1152. [2] Schroeder, K., G. P.Gasparini, M. Tangherlini, and M. Astraldi, 2006. Geophys. Res. Lett., 33, L21607, doi:10.1029/2006GL027121.

Thermal, chemical, and optical properties of Crater Lake, Oregon

USGS Publications Warehouse

Larson, G.L.; Hoffman, R.L.; McIntire, D.C.; Buktenica, M.W.; Girdner, S.F.

2007-01-01

Crater Lake covers the floor of the Mount Mazama caldera that formed 7700 years ago. The lake has a surface area of 53 km2 and a maximum depth of 594 m. There is no outlet stream and surface inflow is limited to small streams and springs. Owing to its great volume and heat, the lake is not covered by snow and ice in winter unlike other lakes in the Cascade Range. The lake is isothermal in winter except for a slight increase in temperature in the deep lake from hyperadiabatic processes and inflow of hydrothermal fluids. During winter and spring the water column mixes to a depth of about 200-250 m from wind energy and convection. Circulation of the deep lake occurs periodically in winter and spring when cold, near-surface waters sink to the lake bottom; a process that results in the upwelling of nutrients, especially nitrate-N, into the upper strata of the lake. Thermal stratification occurs in late summer and fall. The maximum thickness of the epilimnion is about 20 m and the metalimnion extends to a depth of about 100 m. Thus, most of the lake volume is a cold hypolimnion. The year-round near-bottom temperature is about 3.5??C. Overall, hydrothermal fluids define and temporally maintain the basic water quality characteristics of the lake (e.g., pH, alkalinity and conductivity). Total phosphorus and orthophosphate-P concentrations are fairly uniform throughout the water column, where as total Kjeldahl-N and ammonia-N are highest in concentration in the upper lake. Concentrations of nitrate-N increase with depth below 200 m. No long-term changes in water quality have been detected. Secchi disk (20-cm) clarity varied seasonally and annually, but was typically highest in June and lowest in August. During the current study, August Secchi disk clarity readings averaged about 30 m. The maximum individual clarity reading was 41.5 m in June 1997. The lowest reading was 18.1 m in July 1995. From 1896 (white-dinner plate) to 2003, the average August Secchi disk reading was about 30 m. No long-term changes in the Secchi disk clarity were observed. Average turbidity of the water column (2-550 m) between June and September from 1991 to 2000 as measured by a transmissometer ranged between 88.8% and 90.7%. The depth of 1% of the incident solar radiation during thermal stratification varied annually between 80 m and 100 m. Both of these measurements provided additional evidence about the exceptional clarity of Crater Lake. ?? 2007 Springer Science+Business Media B.V.

Spatial and temporal variability of Alexandrium cyst fluxes in the Gulf of Maine: Relationship to seasonal particle export and resuspension.

PubMed

Pilskaln, C H; Anderson, D M; McGillicuddy, D J; Keafer, B A; Hayashi, K; Norton, K

2014-05-01

Quantification of Alexandrium cyst fluxes through the Gulf of Maine water column is central to understanding the linkage between the source and fate of annual Alexandrium blooms in the offshore waters. These blooms often lead to paralytic shellfish poisoning (PSP) and extensive closures of shellfish beds. We report here on time-series sediment trap deployments completed at four offshore locations in the gulf between 2005 and 2010 as components of two ECOHAB-GOM field programs. Data presented documents the substantial spatial and temporal fluctuations in Alexandrium fundyense cyst fluxes in the gulf. Cyst delivery out of the euphotic zone peaked primarily between July and August following annual spring-summer Alexandrium blooms and was greatest in the western gulf. At all sites, cyst flux maxima to the subsurface waters were rarely coincident with seasonal peaks in the total mass export of particulate material indicating that cyst delivery was primarily via individually sinking cysts. Where persistent benthic nepheloid layers (BNLs) exist, significant sediment resuspension input of cysts to the near-bottom water column was evidenced by deep cyst fluxes that were up to several orders of magnitude greater than that measured above the BNL. The largest cyst fluxes in the BNL were observed in the eastern gulf, suggesting greater resuspension energy and BNL cyst inventories in this region. Temporal similarities between peak cyst export out of the upper ocean and peak cyst fluxes in the BNL were observed and document the contribution of seasonal, newly formed cysts to the BNL. The data however also suggest that many Alexandrium cells comprising the massive, short-lived blooms do not transition into cysts. Time-series flow measurements and a simple 1D model demonstrate that the BNL cyst fluxes reflect the combined effects of tidal energy-maintained resuspension, deposition, and input of cysts from the overlying water column.

Spatial and temporal variability of Alexandrium cyst fluxes in the Gulf of Maine: Relationship to seasonal particle export and resuspension

PubMed Central

Pilskaln, C.H.; Anderson, D.M.; McGillicuddy, D.J.; Keafer, B.A.; Hayashi, K.; Norton, K.

2014-01-01

Quantification of Alexandrium cyst fluxes through the Gulf of Maine water column is central to understanding the linkage between the source and fate of annual Alexandrium blooms in the offshore waters. These blooms often lead to paralytic shellfish poisoning (PSP) and extensive closures of shellfish beds. We report here on time-series sediment trap deployments completed at four offshore locations in the gulf between 2005 and 2010 as components of two ECOHAB–GOM field programs. Data presented documents the substantial spatial and temporal fluctuations in Alexandrium fundyense cyst fluxes in the gulf. Cyst delivery out of the euphotic zone peaked primarily between July and August following annual spring–summer Alexandrium blooms and was greatest in the western gulf. At all sites, cyst flux maxima to the subsurface waters were rarely coincident with seasonal peaks in the total mass export of particulate material indicating that cyst delivery was primarily via individually sinking cysts. Where persistent benthic nepheloid layers (BNLs) exist, significant sediment resuspension input of cysts to the near-bottom water column was evidenced by deep cyst fluxes that were up to several orders of magnitude greater than that measured above the BNL. The largest cyst fluxes in the BNL were observed in the eastern gulf, suggesting greater resuspension energy and BNL cyst inventories in this region. Temporal similarities between peak cyst export out of the upper ocean and peak cyst fluxes in the BNL were observed and document the contribution of seasonal, newly formed cysts to the BNL. The data however also suggest that many Alexandrium cells comprising the massive, short-lived blooms do not transition into cysts. Time-series flow measurements and a simple 1D model demonstrate that the BNL cyst fluxes reflect the combined effects of tidal energy-maintained resuspension, deposition, and input of cysts from the overlying water column. PMID:25431527

Geochemical monitoring for detection of CO_{2} leakage from subsea storage sites

NASA Astrophysics Data System (ADS)

García-Ibáñez, Maribel I.; Omar, Abdirahman M.; Johannessen, Truls

2017-04-01

Carbon Capture and Storage (CCS) in subsea geological formations is a promising large-scale technology for mitigating the increases of carbon dioxide (CO2) in the atmosphere. However, detection and quantification of potential leakage of the stored CO2 remains as one of the main challenges of this technology. Geochemical monitoring of the water column is specially demanding because the leakage CO2 once in the seawater may be rapidly dispersed by dissolution, dilution and currents. In situ sensors capture CO2 leakage signal if they are deployed very close to the leakage point. For regions with vigorous mixing and/or deep water column, and for areas far away from the leakage point, a highly sensitive carbon tracer (Cseep tracer) was developed based on the back-calculation techniques used to estimate anthropogenic CO2 in the water column. Originally, the Cseep tracer was computed using accurate discrete measurements of total dissolved inorganic carbon (DIC) and total alkalinity (AT) in the Norwegian Sea to isolate the effect of natural submarine vents in the water column. In this work we assess the effect of measurement variables on the performance of the method by computing the Cseep tracer twice: first using DIC and AT, and second using partial pressure of CO2 (pCO2) and pH. The assessment was performed through the calculation of the signal to noise ratios (STNR). We found that the use of the Cseep tracer increases the STNR ten times compared to the raw measurement data, regardless of the variables used. Thus, while traditionally the pH-pCO2 pair generates the greatest uncertainties in the oceanic CO2 system, it seems that the Cseep technique is insensitive to that issue. On the contrary, the use of the pCO2-pH pair has the highest CO2 leakage detection and localization potential due to the fact that both pCO2 and pH can currently be measured at high frequency and in an autonomous mode.

Polycyclic aromatic hydrocarbons (PAHs) and organochlorine pesticides in water columns from the Pearl River and the Macao harbor in the Pearl River Delta in South China.

PubMed

Luo, Xiaojun; Mai, Bixian; Yang, Qingshu; Fu, Jiamo; Sheng, Guoying; Wang, Zhishi

2004-06-01

Polycyclic aromatic hydrocarbons (PAHs) and organochlorine pesticides (OCPs) were measured in suspended particles and dissolved phase from the Baiertang water column and the Macao water column samples as collected from the Guangzhou channel of the Pearl River and the Macao harbor, where the sediments were heavily contaminated with organic pollutants. Total OCPs concentration varies from 23.4 to 61.7 ng/l in Baiertang water column and from 25.2 to 67.8 ng/l in Macao column, while total PAHs concentration varies from 987.1 to 2878.5 ng/l in the Baiertang water column and from 944.0 to 6654.6 ng/l in the Macao column. The vertical distribution profiles of pollutants and the partition of pollutants between particles and dissolved phases indicate that the sediments in Baiertang act as an important source of selected pollutants, and the pollutants in water of this region were mainly originated from the release and re-suspension of contaminants residing in the sediments. The sediments in Macao harbor act as a reservoir for organochlorine pesticides, such as DDTs mainly introduced by river inflow from Xijiang and PAHs input by brackish water from the Lingdingyang estuary. Combustion of fossil fuels and petroleum input are the main sources of PAHs in the Macao water column, while combustion of fossil fuels and coal is responsible for the PAHs in the Baiertang water column. The ratios of DDT/(DDD+DDE) for the Macao water column samples demonstrate that such chemicals were input into this region in recent times.

Thermohaline variability in the Adriatic and Northern Ionian Seas observed from the Argo floats during 2010-2014

NASA Astrophysics Data System (ADS)

Kovačević, Vedrana; Ursella, Laura; Gačić, Miroslav; Notarstefano, Giulio; Menna, Milena; Bensi, Manuel; Civitarese, Giuseppe; Poulain, Pierre-Marie

2015-04-01

The Adriatic Sea is the northernmost basin of the Eastern Mediterranean Sea (EMed). At its southern end, the basin communicates with the adjacent Ionian Sea through the 80 km wide and 850 m deep Strait of Otranto. Due to the river discharge in the north and due to the strong winter cooling, the Adriatic is both a dilution basin and the dense water formation region. The basin-wide circulation is cyclonic. The circulation is however, energetic also at smaller spatial and temporal scales, and several circulation cells and mesoscale features are regularly observed equally along the littoral and in the open sea. The North Adriatic Dense Water (NAdDW) formed during winter is the densest water of the whole Mediterranean Sea (up to 1060 kg/m3). It flows as a density driven bottom current from the northern shelf toward south, filling the deep layers of the middle and southern Adriatic pits. The deep open-sea area of the South Adriatic Pit (SAP, 1200 m) feels the influence of a water mass exchange through the Strait of Otranto. Specifically, it receives salty and warm surface and Levantine Intermediate Waters from the Ionian Sea. Through the open-sea winter convection that homogenizes and ventilates 400-800 m thick upper water column, this salty water contributes to the formation of the Adriatic Deep Water (AdDW, 1029.17-1029.20 kg/m3), which is not as dense as the NAdDW. Both dense waters eventually mix and spill across the sill ventilating the deep and bottom layers of the Ionian Sea, and driving the deep thermohaline cell of the EMed. Thermohaline properties of the Adriatic Sea vary at wide spatial and temporal scales, and this in turn affects the properties of its dense waters. The long-term scales are of a particular interest, as they are often associated with the biogeochemical and biotic variability such as intrusion of alien species into the Adriatic Sea and interconnection with the adjacent Ionian basin. Due to the extremely variable meteo- and climatic conditions, the signal of the Adriatic dense waters can be fairly irregular and impulsive. Sporadic in-situ surveys by research vessels are not always sufficient to capture this irregularity and its consequences on the circulation. The Lagrangian platforms are disseminated within the whole Mediterranean through the international Argo program. They are a useful tool to assess some of the spatial and temporal variability in the two basins. Combining the information from the floats and in-situ CTD profiles from oceanographic campaigns, we picture the inter-annual variability of the thermohaline properties in general during 2010-2014. In addition, the peculiarities of the very dense water overflow that during 2012 spilled out form the Strait of Otranto into the Northern Ionian is evidenced. Also, by the remotely sensed sea surface topography, we depict the most prominent circulation features of the upper layer.

Towards a model-based understanding of the Mediterranean circulation during the Messinian Salinity Crisis

NASA Astrophysics Data System (ADS)

Simon, Dirk; Meijer, Paul

2016-04-01

Today, the Atlantic-Mediterranean gateway (the Strait of Gibraltar) and the strong evaporative loss in the east let the Mediterranean Sea attain a salinity of 2-3 g/l higher than the Atlantic Ocean. During the winter months, strong cooling of surface waters in the north forms deep water, which mixes the Mediterranean, while during summer the water column is stratified. During the Messinian Salinity Crisis (MSC, 5.97-5.33Ma) the salt concentration was high enough to reach the saturation of gypsum (~130-160 g/l) and halite (~350 g/l). This caused large deposits of these evaporites all over the basin, capturing 6% of the World Ocean salt within the Mediterranean at the time. Although several mechanisms have been proposed as to how the Mediterranean circulation might have functioned, these mechanisms have yet to be rooted in physics and tested quantitatively. Understanding circulation during the MSC becomes particularly important when comparing Mediterranean marginal to deep basins. On the one hand, many of the marginal basins in the Mediterranean are well studied, like the Sorbas basin (Spain) or the Vena del Gesso basin (Italy). On the other hand, the deep Mediterranean is less well studied, as no full record of the whole deep sequence exists. This makes it very complicated to correlate marginal and deep basin records. Here we are presenting the first steps in working towards a physics-based understanding of the mixing and stratification bahaviour of the Mediterranean Sea during the MSC. The final goal is to identify the physical mechanism needed to form such a salt brine and to understand how it differs from today's situation. We are hoping to compare our results to, and learn from, the much smaller but best available analog to the MSC, the Dead Sea, where recent overturning has been documented.

Seasonal variability in the abundance and stable carbon-isotopic composition of lipid biomarkers in suspended particulate matter from a stratified equatorial lake (Lake Chala, Kenya/Tanzania): Implications for the sedimentary record

NASA Astrophysics Data System (ADS)

van Bree, L. G. J.; Peterse, F.; van der Meer, M. T. J.; Middelburg, J. J.; Negash, A. M. D.; De Crop, W.; Cocquyt, C.; Wieringa, J. J.; Verschuren, D.; Sinninghe Damsté, J. S.

2018-07-01

We studied the distribution and stable carbon-isotopic (δ13C) composition of various lipid biomarkers in suspended particulate matter (SPM) from the water column of Lake Chala, a permanently stratified crater lake in equatorial East Africa, to evaluate their capacity to reflect seasonality in water-column processes and associated changes in the lake's phytoplankton community. This lake has large seasonal variation in water-column dynamics (stratified during wet seasons and mixing during dry seasons) with associated phytoplankton succession. We analyzed lipid biomarkers in SPM collected monthly at 5 depths (0-80 m) from September 2013 to January 2015. Seasonal variation in total phytoplankton biovolume is strongly reflected in the concentration of phytadienes, a derivative of the general photosynthetic pigment chlorophyll. The wax and wane of several specific biomarker lipids between June and December 2014 reflect pronounced phytoplankton succession after deep mixing, starting with a long and sustained chlorophyte bloom (reflected by C23:1, C25:1 and C27:1n-alkenes, and C21 and C23n-alkanes), followed by a peak in diatoms between July and October (loliolide and isololiolide), and then eustigmatophytes (C30 and C32 1,15 diols) once stratification resumes in October. Peak abundance of the C19:1n-alkene during shallow mixing of the water column in January-February 2014 can be tentatively linked to the seasonal distribution of cyanobacteria. The concentration, seasonal variability, and low δ13C values of the C28 fatty acid in the SPM suggest that this biomarker is produced in the water column of Lake Chala instead of having the typically assumed vascular plant origin. The δ13C signature of particulate carbon and all aquatic biomarkers become increasingly more negative (by up to 16‰) during mixing-induced episodes of high productivity, whereas enrichment would be expected during such blooms. This reversed fractionation may be attributed to chemically enhanced diffusion, which generates depleted HCO3- under high pH (>9) conditions, as occur in the epilimnion of Lake Chala during periods of high productivity. The influence of this process can potentially explain previously observed 13C-depleted carbon signatures in the paleorecord of Lake Chala, and should be considered prior to paleorecord interpretation of organic-matter δ13C values derived (partially) from aquatic organisms in high-pH, i.e. alkaline, lakes.

The Ocean`s Thermohaline Circulation in a Fish Tank

NASA Astrophysics Data System (ADS)

Lavender, K.; Joyce, P.; Graziano, L.; Harris, S.; Jaroslow, G.; Lea, C.; Schell, J.; Witting, J.

2005-12-01

This demonstration develops intuition about density stratification, a concept critical to understanding the ocean`s thermohaline circulation. In addition, students learn how temperature and salinity affect density, how these characteristics may be density-compensating, and students gain practice in graphing and interpreting vertical profiles and temperature-salinity (T-S) diagrams. The demonstration requires a rectangular fish tank (5-10 gallons) with a plexiglass partition, preparation of three colored ''water masses'' representing surface water (warm and fresh), ''mystery'' Mediterranean Water (warm and salty), and North Atlantic Deep Water (NADW; cold and salty), a kitchen sponge, and a temperature and salinity probe. Density may be computed using an Equation of State calculator (e.g. online version at http://fermi.jhuapl.edu/denscalc.html). The larger side of the fish tank is filled halfway with NADW, then surface water is layered on top by carefully pouring it on a floating sponge. A student volunteer measures the temperature and salinity of the two water masses, while another computes the densities. Students draw vertical profiles and T-S diagrams representing the temperature, salinity, and density of the water column. The properties of the ''mystery'' water are measured and students predict what will happen when the water is poured on the opposite side of the partition and is allowed to overflow into the layered water. If the density gradients are sufficiently large, a beautiful internal wave develops as the mystery water overflows the sill and becomes intermediate Mediterranean Water. If time permits, having a student blow on the surface illustrates the limited influence of ''wind'' with depth; an internal wave may by forced by depressing the thermocline with a large, flat spoon; and pouring extra NADW on the sponge floating at the surface may illustrate deep convection.

Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP

PubMed Central

Gutierrez, Tony; Singleton, David R; Berry, David; Yang, Tingting; Aitken, Michael D; Teske, Andreas

2013-01-01

The massive influx of crude oil into the Gulf of Mexico during the Deepwater Horizon (DWH) disaster triggered dramatic microbial community shifts in surface oil slick and deep plume waters. Previous work had shown several taxa, notably DWH Oceanospirillales, Cycloclasticus and Colwellia, were found to be enriched in these waters based on their dominance in conventional clone and pyrosequencing libraries and were thought to have had a significant role in the degradation of the oil. However, this type of community analysis data failed to provide direct evidence on the functional properties, such as hydrocarbon degradation of organisms. Using DNA-based stable-isotope probing with uniformly 13C-labelled hydrocarbons, we identified several aliphatic (Alcanivorax, Marinobacter)- and polycyclic aromatic hydrocarbon (Alteromonas, Cycloclasticus, Colwellia)-degrading bacteria. We also isolated several strains (Alcanivorax, Alteromonas, Cycloclasticus, Halomonas, Marinobacter and Pseudoalteromonas) with demonstrable hydrocarbon-degrading qualities from surface slick and plume water samples collected during the active phase of the spill. Some of these organisms accounted for the majority of sequence reads representing their respective taxa in a pyrosequencing data set constructed from the same and additional water column samples. Hitherto, Alcanivorax was not identified in any of the previous water column studies analysing the microbial response to the spill and we discuss its failure to respond to the oil. Collectively, our data provide unequivocal evidence on the hydrocarbon-degrading qualities for some of the dominant taxa enriched in surface and plume waters during the DWH oil spill, and a more complete understanding of their role in the fate of the oil. PMID:23788333

Foam, a promising vehicle to deliver nanoparticles for vadose zone remediation.

PubMed

Shen, Xin; Zhao, Lin; Ding, Yuanzhao; Liu, Bo; Zeng, Hui; Zhong, Lirong; Li, Xiqing

2011-02-28

Foam delivery of remedial amendments for in situ immobilization of deep vadose zone contaminants can overcome the intrinsic problems associated with solution-based delivery, such as preferential flow and contaminant mobilization. In this work, the feasibility of using foam to deliver nanoparticles in unsaturated porous media was investigated. Carboxyl-modified polystyrene latex microspheres were used as surrogates for nanoparticles of remediation purposes. Foams generated from the solutions of six commonly available surfactants all had excellent abilities to carry the microspheres. The presence of the microspheres did not reduce the stabilities of the foams. When microsphere-laden foam was injected through the unsaturated columns, the fractions of microspheres exiting the column were much higher than that when the microsphere water suspensions were injected through the columns. The enhanced microsphere transport implies that foam delivery could significantly increase the radius of influence of injected nanoparticles of remediation purposes. Reduced tension at air-water interfaces by the surfactant and increased driving forces imparted on the microspheres at the interfaces by the flowing foam bubbles may have both contributed to the enhanced transport. Preliminary tests also demonstrated that foam can carry significant fractions of zero valent iron nanoparticles at concentrations relevant to field remediation conditions (up to 5.3 g L(-1)). As such, this study demonstrates that surfactant foam is potentially a promising vehicle to deliver nanoparticles for vadose zone remediation. Copyright © 2010 Elsevier B.V. All rights reserved.

Integrated carbon, sulfur, and nitrogen isotope chemostratigraphy of the Ediacaran Lantian Formation in South China: Spatial gradient, ocean redox oscillation, and fossil distribution.

PubMed

Wang, W; Guan, C; Zhou, C; Peng, Y; Pratt, L M; Chen, X; Chen, L; Chen, Z; Yuan, X; Xiao, S

2017-07-01

The Ediacaran Doushantuo Formation in South China is a prime target for geobiological investigation because it offers opportunities to integrate chemostratigraphic and paleobiological data. Previous studies were mostly focused on successions in shallow-water shelf facies, but data from deep-water successions are needed to fully understand basinal redox structures. Here, we report δ 13 C carb , δ 13 C org , δ 34 S pyr , δ 34 S CAS , and δ 15 N sed data from a drill core of the fossiliferous Lantian Formation, which is a deep-water equivalent of the Doushantuo Formation. Our data confirm a large (>10‰) spatial gradient in δ 13 C carb in the lower Doushantuo/Lantian formations, but this gradient is probably due to the greater sensitivity of carbonate-poor deep-water sediments to isotopic mixing with 13 C-depleted carbonate cements. A pronounced negative δ 13 C carb excursion (EN3) in the upper Doushantuo/Lantian formations, however, is spatially consistent and may be an equivalent of the Shuram excursion. δ 34 S pyr is more negative in deeper-water facies than in shallow-water facies, particularly in the lower Doushantuo/Lantian formations, and this spatial pattern is interpreted as evidence for ocean redox stratification: Pyrite precipitated in euxinic deep waters has lower δ 34 S pyr than that formed within shallow-water sediments. The Lantian Formation was probably deposited in oscillating oxic and euxinic conditions. Euxinic black shales have higher TOC and TN contents, but lower δ 34 S pyr and δ 15 N sed values. In euxinic environments, pyrite was predominantly formed in the water column and organic nitrogen was predominantly derived from nitrogen fixation or NH 4 + assimilation because of quantitative denitrification, resulting in lower δ 34 S pyr and δ 15 N sed values. Benthic macroalgae and putative animals occur exclusively in euxinic black shales. If preserved in situ, these organisms must have lived in brief oxic episodes punctuating largely euxinic intervals, only to be decimated and preserved when the local environment switched back to euxinia again. Thus, taphonomy and ecology were the primary factors controlling the stratigraphic distribution of macrofossils in the Lantian Formation. © 2017 John Wiley & Sons Ltd.

Spatio-Temporal Evolution of Sound Speed Channels on the Chukchi Shelf

NASA Astrophysics Data System (ADS)

Eickmeier, J.; Badiey, M.; Wan, L.

2017-12-01

The physics of an acoustic waveguide are influenced by various boundary conditions as well as spatial and temporal fluctuations in temperature and salinity profiles the water column. The shallow water Canadian Basin Acoustic Propagation Experiment (CANAPE) experiment was designed to study the effect of oceanographic variability on the acoustic field. A pilot study was conducted in the summer of 2015, full deployment of acoustic and environmental moorings took place in 2016, and recovery will occur in late 2017. An example of strong oceanographic variability in the SW region is depicted in Figure 1. Over the course of 7 days, warm Bering Sea water arrived on the Chukchi Shelf and sank in the water column to between 25 m and 125 m depth. This warm water spread to a range of 10 km and a potential eddy of warm water formed causing an increase in sound speed between 15 km and 20 km range in Fig. 1(b). Due to the increased sound speed, a strong sound channel evolved between 100 m and 200 m for acoustic waves arriving from off the shelf, deep water sources. In Fig. 1(a), the initial formation of the acoustic channel is only evident in 50 m to 100 m of water out to a range of 5 km. Recorded environmental data will be used to study fluctuations in sound speed channel formation on the Chukchi Shelf. Data collected in 2015 and 2016 have shown sound duct evolution over 7 days and over a one-month period. Analysis is projected to show sound channel formation over a new range of spatio-temporal scales. This analysis will show a cycle of sound channels opening and closing on the shelf, where this cycle strongly influences the propagation path, range and attenuation of acoustic waves.

Relationships between outgoing longwave radiation and diabatic heating in reanalyses

NASA Astrophysics Data System (ADS)

Zhang, Kai; Randel, William J.; Fu, Rong

2017-10-01

This study investigates relationships between daily variability in National Oceanographic and Atmospheric Administration (NOAA) outgoing longwave radiation (OLR), as a proxy for deep convection, and the global diabatic heat budget derived from reanalysis data sets. Results are evaluated based on data from ECMWF Reanalysis (ERA-Interim), Japanese 55-year Reanalysis (JRA-55) and Modern-Era Retrospective Analysis for Research and Applications (MERRA2). The diabatic heating is separated into components linked to `physics' (mainly latent heat fluxes), plus longwave (LW) and shortwave (SW) radiative tendencies. Transient variability in deep convection is highly correlated with diabatic heating throughout the troposphere and stratosphere. Correlation patterns and composite analyses show that enhanced deep convection (lower OLR) is linked to amplified heating in the tropical troposphere and in the mid-latitude storm tracks, tied to latent heat release. Enhanced convection is also linked to radiative cooling in the lower stratosphere, due to weaker upwelling LW from lower altitudes. Enhanced transient deep convection increases LW and decreases SW radiation in the lower troposphere, with opposite effects in the mid to upper troposphere. The compensating effects in LW and SW radiation are largely linked to variations in cloud fraction and water content (vapor, liquid and ice). These radiative balances in reanalyses are in agreement with idealized calculations using a column radiative transfer model. The overall relationships between OLR and diabatic heating are robust among the different reanalyses, although there are differences in radiative tendencies in the tropics due to large differences of cloud water and ice content among the reanalyses. These calculations provide a simple statistical method to quantify variations in diabatic heating linked to transient deep convection in the climate system.

Bacterial biomass and activity in the deep waters of the eastern Atlantic—evidence of a barophilic community

NASA Astrophysics Data System (ADS)

Patching, J. W.; Eardly, D.

1997-09-01

Bacterial biomass and activity were investigated in deep waters at two sites in the eastern Atlantic, of similar depth (4560-4800 m), but varying in their nutritional status. The Northern (N) site was eutrophic and subject to a strong seasonal input of surface derived organic matter (phytodetritus) to the sediment. The Southern (S) site was oligotrophic. Deep water at this site does not appear to receive any strong seasonal input. Bacterial numbers in the deep water column at the N site showed no significant seasonal variation but were greater than those at the S site. Deep water bacteria were typically small and free-living. From biovolume determinations, it was estimated that mean concentrations of bacterial organic carbon at depths greater than 500 m were 0.12 (0.03-0.29) μg C 1 -1 and 0.02 (0.01-0.04) μg C 1 -1 at the N and S sites, respectively. Rates of thymidine and leucine incorporation were used as indicators of bacterial activity. Bacterial communities in water in contact with the sediment (SCW; sediment contact water) at both sites (but especially at the S site) were strongly barophilic at in situ temperatures (2.5-4.1°C). The barophilic response of thymidine incorporation was enhanced when SCW samples from the N site were incubated at 11.5°C. It is proposed that this result indicated an elevating effect of pressure on cardinal temperatures and that the SCW community was obligately psychrophilic when unpressurised. Comparison of cell-specific incorporation rates determined under in situ conditions showed bacteria in the SCW to have levels of activity comparable with bacteria from a depth of 150 m. Thymidine incorporation rates were highest in SCW samples taken at the N site in May 1988 and September 1989. Thymidine incorporation by SCW samples taken immediately before (10 April 1994) the main spring-bloom-associated deposition of phytodetritus was significantly lower and comparable with that determined for the oligotrophic S site. The attributes exhibited by the SCW community appeared to be highly localised. We conclude that the bacterial communities of the SCW are active and adapted to their environment. Activity is influenced by the trophic nature of the site and may show temporal changes linked with episodic food supply. We postulate that the existence of such communities is linked to the role of the sediment-water interface as the initial site of deposition of sea-surface derived labile organic material.

A global ocean climatological atlas of the Turner angle: implications for double-diffusion and water-mass structure

NASA Astrophysics Data System (ADS)

You, Yuzhu

2002-11-01

The 1994 Levitus climatological atlas is used to calculate the Turner angle (named after J. Stewart Turner) to examine which oceanic water masses are favorable for double-diffusion in the form of diffusive convection or salt-fingering and which are doubly stable. This atlas complements the Levitus climatology. It reveals the major double-diffusive signals associated with large-scale water-mass structure. In total, about 44% of the oceans display double-diffusion, of which 30% is salt-fingering and 14% is diffusive double-diffusion. Results show that various central and deep waters are favorable for salt-fingering. The former is due to positive evaporation minus precipitation, and the latter is due to thermohaline circulation, i.e. the southward spreading of relatively warm, salty North Atlantic Deep Water (NADW) overlying cold, fresh Antarctic Bottom Water. In the northern Indian Ocean and eastern North Atlantic, favorable conditions for salt-fingering are found throughout the water column. The Red Sea (including the Persian Gulf) and Mediterranean Sea are the sources of warm, salty water for the ocean. As consequence, temperature and salinity in these outflow regions both decrease from the sea surface to the bottom. On the other hand, ocean currents are in general sluggish in these regions. In the polar and subpolar regions of Arctic and Antarctic, Okhotsk Sea, Gulf of Alaska, the subpolar gyre of the North Pacific, the Labrador Sea, and the Norwegian Sea, the upper layer water is favorable for diffusive convection because of high latitude surface cooling and ice melting. Weak and shallow diffusive convection is also found throughout tropical regions and the Bay of Bengal. The former is due to excessive precipitation over evaporation and rain cooling, and the latter is due to both precipitation and river runoff. Diffusive convection in the ocean's interior is unique to the South Atlantic between Antarctic Intermediate Water and upper NADW (uNADW). It is the consequence of the intrusive equatorward flow of upper Circumpolar Deep Water, which carries with it the minimum temperature and very low salinity overlying warm, salty uNADW.

Experimental detection and focusing in shallow water by decomposition of the time reversal operator.

PubMed

Prada, Claire; de Rosny, Julien; Clorennec, Dominique; Minonzio, Jean-Gabriel; Aubry, Alexandre; Fink, Mathias; Berniere, Lothar; Billand, Philippe; Hibral, Sidonie; Folegot, Thomas

2007-08-01

A rigid 24-element source-receiver array in the 10-15 kHz frequency band, connected to a programmable electronic system, was deployed in the Bay of Brest during spring 2005. In this 10- to 18-m-deep environment, backscattered data from submerged targets were recorded. Successful detection and focusing experiments in very shallow water using the decomposition of the time reversal operator (DORT method) are shown. The ability of the DORT method to separate the echo of a target from reverberation as well as the echo from two different targets at 250 m is shown. An example of active focusing within the waveguide using the first invariant of the time reversal operator is presented, showing the enhanced focusing capability. Furthermore, the localization of the scatterers in the water column is obtained using a range-dependent acoustic model.

Ecological and morphological traits predict depth-generalist fishes on coral reefs

PubMed Central

Bridge, Tom C. L.; Luiz, Osmar J.; Coleman, Richard R.; Kane, Corinne N.; Kosaki, Randall K.

2016-01-01

Ecological communities that occupy similar habitats may exhibit functional convergence despite significant geographical distances and taxonomic dissimilarity. On coral reefs, steep gradients in key environmental variables (e.g. light and wave energy) restrict some species to shallow depths. We show that depth-generalist reef fishes are correlated with two species-level traits: caudal fin aspect ratio and diet. Fishes with high aspect ratio (lunate) caudal fins produce weaker vortices in the water column while swimming, and we propose that ‘silent swimming’ reduces the likelihood of detection and provides an advantage on deeper reefs with lower light irradiance and water motion. Significant differences in depth preference among trophic guilds reflect variations in the availability of different food sources along a depth gradient. The significance of these two traits across three geographically and taxonomically distinct assemblages suggests that deep-water habitats exert a strong environmental filter on coral reef-fish assemblages. PMID:26791616

High Ice Water Content at Low Radar Reflectivity near Deep Convection. Part I ; Consistency of In Situ and Remote-Sensing Observations with Stratiform Rain Column Simulations

NASA Technical Reports Server (NTRS)

Fridlind, A. M.; Ackerman, A. S.; Grandin, A.; Dezitter, F.; Weber, M.; Strapp, J. W.; Korolev, A. V.; Williams, C. R.

2015-01-01

Occurrences of jet engine power loss and damage have been associated with flight through fully glaciated deep convection at -10 to -50 degrees Centigrade. Power loss events commonly occur during flight through radar reflectivity (Zeta (sub e)) less than 20-30 decibels relative to Zeta (dBZ - radar returns) and no more than moderate turbulence, often overlying moderate to heavy rain near the surface. During 2010-2012, Airbus carried out flight tests seeking to characterize the highest ice water content (IWC) in such low-radar-reflectivity regions of large, cold-topped storm systems in the vicinity of Cayenne, Darwin, and Santiago. Within the highest IWC regions encountered, at typical sampling elevations (circa 11 kilometers), the measured ice size distributions exhibit a notably narrow concentration of mass over area-equivalent diameters of 100-500 micrometers. Given substantial and poorly quantified measurement uncertainties, here we evaluate the consistency of the Airbus in situ measurements with ground-based profiling radar observations obtained under quasi-steady, heavy stratiform rain conditions in one of the Airbus-sampled locations. We find that profiler-observed radar reflectivities and mean Doppler velocities at Airbus sampling temperatures are generally consistent with those calculated from in situ size-distribution measurements. We also find that column simulations using the in situ size distributions as an upper boundary condition are generally consistent with observed profiles of radar reflectivity (Ze), mean Doppler velocity (MDV), and retrieved rain rate. The results of these consistency checks motivate an examination of the microphysical pathways that could be responsible for the observed size-distribution features in Ackerman et al. (2015).

Microbial Community Composition, Functions, and Activities in the Gulf of Mexico 1 Year after the Deepwater Horizon Accident.

PubMed

Yergeau, Etienne; Maynard, Christine; Sanschagrin, Sylvie; Champagne, Julie; Juck, David; Lee, Kenneth; Greer, Charles W

2015-09-01

Several studies have assessed the effects of the released oil on microbes, either during or immediately after the Deepwater Horizon accident. However, little is known about the potential longer-term persistent effects on microbial communities and their functions. In this study, one water column station near the wellhead (3.78 km southwest of the wellhead), one water column reference station outside the affected area (37.77 km southeast of the wellhead), and deep-sea sediments near the wellhead (3.66 km southeast of the wellhead) were sampled 1 year after the capping of the well. In order to analyze microbial community composition, function, and activity, we used metagenomics, metatranscriptomics, and mineralization assays. Mineralization of hexadecane was significantly higher at the wellhead station at a depth of ∼1,200 m than at the reference station. Community composition based on taxonomical or functional data showed that the samples taken at a depth of ∼1,200 m were significantly more dissimilar between the stations than at other depths (surface, 100 m, 750 m, and >1,500 m). Both Bacteria and Archaea showed reduced activity at depths of ∼1,200 m when the wellhead station was compared to the reference station, and their activity was significantly higher in surficial sediments than in 10-cm sediments. Surficial sediments also harbored significantly different active genera than did 5- and 10-cm sediments. For the remaining microbial parameters assessed, no significant differences could be observed between the wellhead and reference stations and between surface and 5- to 10-cm-deep sediments. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Marine algae are `taught' the basics of angular momentum

NASA Astrophysics Data System (ADS)

Allen, John Taylor

2017-11-01

Advanced modelling studies and high-resolution observations have shown that flows related to instability of the mesoscale ( 1-10 km scale) may provide both the fertilisation mechanism for nutrient-depleted (oligotrophic) surface waters and a subduction mechanism for the rapid export of phytoplankton biomass to the deep ocean. Here, a detailed multidisciplinary analysis of the data from an example high-resolution observational campaign is presented. The data provide direct observations of the transport of phytoplankton through baroclinic instability. Furthermore, the data confirm that this transport is constrained by the requirement to conserve angular momentum, expressed in a stratified water column as the conservation of potential vorticity. This constraint is clearly seen to produce long thin filaments of phytoplankton populations strained out along isopycnal vorticity annuli associated with mesoscale frontal instabilities.

Contribution of Bicarbonate Assimilation to Carbon Pool Dynamics in the Deep Mediterranean Sea and Cultivation of Actively Nitrifying and CO2-Fixing Bathypelagic Prokaryotic Consortia.

PubMed

La Cono, Violetta; Ruggeri, Gioachino; Azzaro, Maurizio; Crisafi, Francesca; Decembrini, Franco; Denaro, Renata; La Spada, Gina; Maimone, Giovanna; Monticelli, Luis S; Smedile, Francesco; Giuliano, Laura; Yakimov, Michail M

2018-01-01

Covering two-thirds of our planet, the global deep ocean plays a central role in supporting life on Earth. Among other processes, this biggest ecosystem buffers the rise of atmospheric CO 2 . Despite carbon sequestration in the deep ocean has been known for a long time, microbial activity in the meso- and bathypelagic realm via the " assimilation of bicarbonate in the dark " (ABD) has only recently been described in more details. Based on recent findings, this process seems primarily the result of chemosynthetic and anaplerotic reactions driven by different groups of deep-sea prokaryoplankton. We quantified bicarbonate assimilation in relation to total prokaryotic abundance, prokaryotic heterotrophic production and respiration in the meso- and bathypelagic Mediterranean Sea. The measured ABD values, ranging from 133 to 370 μg C m -3 d -1 , were among the highest ones reported worldwide for similar depths, likely due to the elevated temperature of the deep Mediterranean Sea (13-14°C also at abyssal depths). Integrated over the dark water column (≥200 m depth), bicarbonate assimilation in the deep-sea ranged from 396 to 873 mg C m -2 d -1 . This quantity of produced de novo organic carbon amounts to about 85-424% of the phytoplankton primary production and covers up to 62% of deep-sea prokaryotic total carbon demand. Hence, the ABD process in the meso- and bathypelagic Mediterranean Sea might substantially contribute to the inorganic and organic pool and significantly sustain the deep-sea microbial food web. To elucidate the ABD key-players, we established three actively nitrifying and CO 2 -fixing prokaryotic enrichments. Consortia were characterized by the co-occurrence of chemolithoautotrophic Thaumarchaeota and chemoheterotrophic proteobacteria. One of the enrichments, originated from Ionian bathypelagic waters (3,000 m depth) and supplemented with low concentrations of ammonia, was dominated by the Thaumarchaeota "low-ammonia-concentration" deep-sea ecotype, an enigmatic and ecologically important group of organisms, uncultured until this study.

Contribution of Bicarbonate Assimilation to Carbon Pool Dynamics in the Deep Mediterranean Sea and Cultivation of Actively Nitrifying and CO2-Fixing Bathypelagic Prokaryotic Consortia

PubMed Central

La Cono, Violetta; Ruggeri, Gioachino; Azzaro, Maurizio; Crisafi, Francesca; Decembrini, Franco; Denaro, Renata; La Spada, Gina; Maimone, Giovanna; Monticelli, Luis S.; Smedile, Francesco; Giuliano, Laura; Yakimov, Michail M.

2018-01-01

Covering two-thirds of our planet, the global deep ocean plays a central role in supporting life on Earth. Among other processes, this biggest ecosystem buffers the rise of atmospheric CO2. Despite carbon sequestration in the deep ocean has been known for a long time, microbial activity in the meso- and bathypelagic realm via the “assimilation of bicarbonate in the dark” (ABD) has only recently been described in more details. Based on recent findings, this process seems primarily the result of chemosynthetic and anaplerotic reactions driven by different groups of deep-sea prokaryoplankton. We quantified bicarbonate assimilation in relation to total prokaryotic abundance, prokaryotic heterotrophic production and respiration in the meso- and bathypelagic Mediterranean Sea. The measured ABD values, ranging from 133 to 370 μg C m−3 d−1, were among the highest ones reported worldwide for similar depths, likely due to the elevated temperature of the deep Mediterranean Sea (13–14°C also at abyssal depths). Integrated over the dark water column (≥200 m depth), bicarbonate assimilation in the deep-sea ranged from 396 to 873 mg C m−2 d−1. This quantity of produced de novo organic carbon amounts to about 85–424% of the phytoplankton primary production and covers up to 62% of deep-sea prokaryotic total carbon demand. Hence, the ABD process in the meso- and bathypelagic Mediterranean Sea might substantially contribute to the inorganic and organic pool and significantly sustain the deep-sea microbial food web. To elucidate the ABD key-players, we established three actively nitrifying and CO2-fixing prokaryotic enrichments. Consortia were characterized by the co-occurrence of chemolithoautotrophic Thaumarchaeota and chemoheterotrophic proteobacteria. One of the enrichments, originated from Ionian bathypelagic waters (3,000 m depth) and supplemented with low concentrations of ammonia, was dominated by the Thaumarchaeota “low-ammonia-concentration” deep-sea ecotype, an enigmatic and ecologically important group of organisms, uncultured until this study. PMID:29403458

Surface Salinity Variability in the North Atlantic During Recent Decades

NASA Technical Reports Server (NTRS)

Haekkinen, Sirpa

2001-01-01

The sea surface salinity (SSS) variability in the North Atlantic is investigated using numerical model simulations for the last 50 years based on atmospheric forcing variability from Comprehensive Atmosphere Ocean Data Set (COADS) and National Center for Environmental Prediction / National Center for Atmospheric Research (NCEP/NCAR) Reanalysis. The largest interannual and longer term variability occurs in two regions: the Labrador Sea and the North Equatorial Countercurrent (NECC) region. In both regions the seasonality of the surface salinity variability is prominent with the maximum standard deviation occurring in the summer/fall period. In the Labrador Sea the summer SSS anomalies far exceed those of wintertime in amplitude. The interannual SSS variability in the subpolar gyre can be attributed to two factors: excess ice melt and heat flux (i.e. deep mixing) variations. On the other hand, heat flux variability can also lead to meridional overturning changes on decadal time scales such that weak overturning is manifested in fresh surface conditions in the subpolar gyre. The overturning changes also influence the NECC region SSS variability. Moreover, the subpolar freshening events are expected to occur during the negative phase of North Atlantic Oscillation which is associated with a weak wintertime surface heat loss in the subpolar gyre. No excess sea ice melt or precipitation is necessary for the formation of the fresh anomalies, because with the lack of wide-spread deep mixing, the fresh water that would be expected based on climatology, would accumulate at the surface. Thus, the fresh water 'conveyor' in the Atlantic operates via the overturning circulation such that deep mixing inserts fresh water while removing heat from the water column.

View of a Water Column on the lead track towards ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

View of a Water Column on the lead track towards the Roundhouse. A corner of the Boiler Shop is on the left, and behind the column is the Carpenter Shop. The Water Column could swing over the track 90 degrees to line up with the Tender's Water Hatch - East Broad Top Railroad & Coal Company, State Route 994, West of U.S. Route 522, Rockhill Furnace, Huntingdon County, PA

View of a Water Column on the lead track towards ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

View of a Water Column on the lead track towards the Roundhouse. A corner of the Boiler Shop is on the left, and behind the Column is the Carpenter Shop. The Water Column could swing over the track 90 degrees to line up with the Tender's Water Hatch - East Broad Top Railroad & Coal Company, State Route 994, West of U.S. Route 522, Rockhill Furnace, Huntingdon County, PA

Habitat filtering of bacterioplankton communities above polymetallic nodule fields and sediments in the Clarion-Clipperton zone of the Pacific Ocean.

PubMed

Lindh, Markus V; Maillot, Brianne M; Smith, Craig R; Church, Matthew J

2018-04-01

Deep-sea mining of commercially valuable polymetallic nodule fields will generate a seabed sediment plume into the water column. Yet, the response of bacterioplankton communities, critical in regulating energy and matter fluxes in marine ecosystems, to such disturbances is unknown. Metacommunity theory, traditionally used in general ecology for macroorganisms, offers mechanistic understanding on the relative role of spatial differences compared with local environmental conditions (habitat filtering) for community assembly. We examined bacterioplankton metacommunities using 16S rRNA amplicons from the Clarion-Clipperton Zone (CCZ) in the eastern Pacific Ocean and in global ocean transect samples to determine sensitivity of these assemblages to environmental perturbations. Habitat filtering was the main assembly mechanism of bacterioplankton community composition in the epi- and mesopelagic waters of the CCZ and the Tara Oceans transect. Bathy- and abyssopelagic bacterioplankton assemblages were mainly assembled by undetermined metacommunity types or neutral and dispersal-driven patch-dynamics for the CCZ and the Malaspina transect. Environmental disturbances may alter the structure of upper-ocean microbial assemblages, with potentially even more substantial, yet unknown, impact on deep-sea communities. Predicting such responses in bacterioplankton assemblage dynamics can improve our understanding of microbially-mediated regulation of ecosystem services in the abyssal seabed likely to be exploited by future deep-sea mining operations. © 2018 Society for Applied Microbiology and John Wiley & Sons Ltd.

Production and Cycling of Methylmercury in High Arctic Wetland Ponds

NASA Astrophysics Data System (ADS)

Lehnherr, I.; St. Louis, V. L.

2010-12-01

Some species of freshwater fish in the Canadian high Arctic contain levels of methylmercury (MeHg) that pose health risks to the northern Inuit peoples that harvest these species as a traditional food source. In temperate regions, wetlands are known natural sites of MeHg production and hence significant MeHg sources to downstream ecosystems. However, the importance of wetlands to Hg methylation in the Arctic is unclear and the sources of MeHg to arctic freshwater ecosystems are still largely unidentified. Our research is demonstrating that some shallow and warm wetland ponds on the Arctic landscape contain high MeHg concentrations compared to nearby deep and cold lakes. We used a mass-balance approach to measure the net in-pond production of MeHg in two warm wetland ponds (Ponds 1 and 2) near Lake Hazen, Ellesmere Island, Nunavut (81° N latitude). We quantified external inputs and outputs of MeHg to and from the ponds, as well as the accumulation of MeHg in the water column during the summers of 2005 and 2008. Any changes in water column MeHg concentrations that could not be accounted for by external inputs or sinks were attributed to in-pond production. The principal external input and sink of MeHg was, respectively, wet atmospheric deposition and water-column MeHg photodemethylation. For 2005, we estimate that the net flux of MeHg from sediments into the water column was 0.015 μg m-2 d-1 in Pond 1 and 0.0016 μg m-2 d-1 in Pond 2. Compared to sediment-water MeHg fluxes measured in Alaskan tundra lakes (0.0015-0.0045 μg m-2 d-1), Pond 1 sediments are a greater source of MeHg while Pond 2 is similar to the Alaskan lakes. Furthermore, the accumulation of MeHg in the water column of Pond 1 (0.0061 μg m-2 d-1) was similar to the net yield of MeHg from temperate boreal wetlands (0.0005-0.006 μg m-2 d-1), demonstrating that these Arctic wetlands are important sites of MeHg production. In addition, we used mercury stable-isotope tracers to quantify methylation and demethylation rates in intact sediment cores collected in 2007 from 8 sites encompassing a range of physico-chemical parameters to investigate why concentrations of MeHg measured in wetland ponds vary greatly among sites, despite superficial similarities in site characteristics. Our presentation will explore spatial and temporal variability in MeHg dynamics in Arctic wetlands in an attempt to determine the biogeochemical factors controlling MeHg cycling and abundance in Arctic freshwater systems.

Response of a macrotidal estuary to changes in anthropogenic mercury loading between 1850 and 2000.

PubMed

Sunderland, Elsie M; Dalziel, John; Heyes, Andrew; Branfireun, Brian A; Krabbenhoft, David P; Gobas, Frank A P C

2010-03-01

Methylmercury (MeHg) bioaccumulation in marine food webs poses risks to fish-consuming populations and wildlife. Here we develop and test an estuarine mercury cycling model for a coastal embayment of the Bay of Fundy, Canada. Mass budget calculations reveal that MeHg fluxes into sediments from settling solids exceed losses from sediment-to-water diffusion and resuspension. Although measured methylation rates in benthic sediments are high, rapid demethylation results in negligible net in situ production of MeHg. These results suggest that inflowing fluvial and tidal waters, rather than coastal sediments, are the dominant MeHg sources for pelagic marine food webs in this region. Model simulations show water column MeHg concentrations peaked in the 1960s and declined by almost 40% by the year 2000. Water column MeHg concentrations respond rapidly to changes in mercury inputs, reaching 95% of steady state in approximately 2 months. Thus, MeHg concentrations in pelagic organisms can be expected to respond rapidly to mercury loading reductions achieved through regulatory controls. In contrast, MeHg concentrations in sediments have steadily increased since the onset of industrialization despite recent decreases in total mercury loading. Benthic food web MeHg concentrations are likely to continue to increase over the next several decades at present-day mercury emissions levels because the deep active sediment layer in this system contains a large amount of legacy mercury and requires hundreds of years to reach steady state with inputs.

Response of a macrotidal estuary to changes in anthropogenic mercury loading between 1850 and 2000

USGS Publications Warehouse

Sunderl, E.M.; Dalziel, J.; Heyes, A.; Branfireun, B.A.; Krabbenhoft, D.P.; Gobas, F.A.P.C.

2010-01-01

Methylmercury (MeHg) bioaccumulation in marine food webs poses risks to fish-consuming populations and wildlife. Here we develop and test an estuarine mercury cycling model for a coastal embayment of the Bay of Fundy, Canada. Mass budget calculations reveal that MeHg fluxes into sediments from settling solids exceed losses from sediment-to-water diffusion and resuspension. Although measured methylation rates in benthic sediments are high, rapid demethylation results in negligible net in situ production of MeHg. These results suggest that inflowing fluvial and tidal waters, rather than coastal sediments, are the dominant MeHg sources for pelagic marine food webs in this region. Model simulations show water column MeHg concentrations peaked in the 1960s and declined by almost40% by the year 2000. Water column MeHg concentrations respond rapidly to changes in mercury inputs, reaching 95% of steady state in approximately 2 months. Thus, MeHg concentrations in pelagic organisms can be expected to respond rapidly to mercury loading reductions achieved through regulatory controls. In contrast MeHg concentrations in sediments have steadily increased since the onset of industrialization despite recent decreases in total mercury loading. Benthic food web MeHg concentrations are likely to continue to increase over the next several decades at present-day mercury emissions levels because the deep active sediment layer in this system contains a large amount of legacy mercury and requires hundreds of years to reach steady state with inputs. ?? 2010 American Chemical Society.

Impacts of Soil-aquifer Heat and Water Fluxes on Simulated Global Climate

NASA Technical Reports Server (NTRS)

Krakauer, N.Y.; Puma, Michael J.; Cook, B. I.

2013-01-01

Climate models have traditionally only represented heat and water fluxes within relatively shallow soil layers, but there is increasing interest in the possible role of heat and water exchanges with the deeper subsurface. Here, we integrate an idealized 50m deep aquifer into the land surface module of the GISS ModelE general circulation model to test the influence of aquifer-soil moisture and heat exchanges on climate variables. We evaluate the impact on the modeled climate of aquifer-soil heat and water fluxes separately, as well as in combination. The addition of the aquifer to ModelE has limited impact on annual-mean climate, with little change in global mean land temperature, precipitation, or evaporation. The seasonal amplitude of deep soil temperature is strongly damped by the soil-aquifer heat flux. This not only improves the model representation of permafrost area but propagates to the surface, resulting in an increase in the seasonal amplitude of surface air temperature of >1K in the Arctic. The soil-aquifer water and heat fluxes both slightly decrease interannual variability in soil moisture and in landsurface temperature, and decrease the soil moisture memory of the land surface on seasonal to annual timescales. The results of this experiment suggest that deepening the modeled land surface, compared to modeling only a shallower soil column with a no-flux bottom boundary condition, has limited impact on mean climate but does affect seasonality and interannual persistence.

Optical Characterization of an Eddy-induced Diatom Bloom West of the Island of Hawaii

NASA Astrophysics Data System (ADS)

Nencioli, F.; Chang, G.; Twardowski, M.; Dickey, T. D.

2010-01-01

Optical properties were collected along a transect across cyclonic eddy Opal in the lee of Hawaii during the E-Flux III field experiment (10-27 March 2005). The eddy was characterized by an intense doming of isopycnal surfaces, and by an enhanced Deep Chlorophyll Maximum Layer (DCML) within its core. The phytoplankton bloom was diatom dominated, evidencing an eddy-induced shift in ecological community. Four distinct regions were identified throughout the water column at Opal's core: a surface mixed layer dominated by small phytoplankton; a layer dominated by "senescent" diatoms between the bottom of the upper mixed layer and the DCML; the DCML; and a deep layer characterized by decreasing phytoplankton activity. We focused on two parameters, the ratio of chlorophyll concentration to particulate beam attenuation coefficient, [chl]/cp, and the backscattering ratio (the particle backscattering to particle scattering ratio), b~bp, and tested their sensitivity to the changes in particle composition observed through the water column at the eddy center. Our results show that [chl]/cp is not a good indicator. Despite the shift in ecological community, the ratio remains controlled primarily by the variation in chlorophyll concentration per cell with depth (photoadaptation), so that its values increase throughout the DCML. Steeper increase of [chl]/cp below the DCML suggest that remineralization might be another important controlling factor. On the other hand, b~bp clearly indicates a shift from a small phytoplankton to a diatom dominated community. Below an upper layer characterized by constant values, the b~bp showed a rapid decrease to a broad minimum within the DCML. The higher values below the DCML are consistent with enhanced remineralization below the eddy-induced bloom. Both the "senescent" and the "healthy" diatom layers are characterized by similar optical properties, indicating some possible limitations in using optical measurements to fully characterize the composition of suspended material in the water column. The inverse relationship between b~bp, reported by others for Case II waters, is observed neither for the background conditions, nor in the presence of the eddy-induced diatom bloom. Between the two parameters, only the backscattering ratio showed the potential to be a successful indicator for changes in particle composition in Case I waters.