The biological deep sea hydrothermal vent as a model to study carbon dioxide capturing enzymes.

PubMed

Minic, Zoran; Thongbam, Premila D

2011-01-01

Deep sea hydrothermal vents are located along the mid-ocean ridge system, near volcanically active areas, where tectonic plates are moving away from each other. Sea water penetrates the fissures of the volcanic bed and is heated by magma. This heated sea water rises to the surface dissolving large amounts of minerals which provide a source of energy and nutrients to chemoautotrophic organisms. Although this environment is characterized by extreme conditions (high temperature, high pressure, chemical toxicity, acidic pH and absence of photosynthesis) a diversity of microorganisms and many animal species are specially adapted to this hostile environment. These organisms have developed a very efficient metabolism for the assimilation of inorganic CO₂ from the external environment. In order to develop technology for the capture of carbon dioxide to reduce greenhouse gases in the atmosphere, enzymes involved in CO₂ fixation and assimilation might be very useful. This review describes some current research concerning CO₂ fixation and assimilation in the deep sea environment and possible biotechnological application of enzymes for carbon dioxide capture.

Smectite Dehydration, Membrane Filtration, and Pore-Water Freshening in Deep Ultra-Low Permeability Formations: Deep Processes in the Nankai Accretionary Wedge

NASA Astrophysics Data System (ADS)

Brown, K. M.; Sample, J. C.; Even, E.; Poeppe, D.; Henry, P.; Tobin, H. J.; Saffer, D. M.; Hirose, T.; Toczko, S.; Maeda, L.

2014-12-01

We address the fundamental questions surrounding the nature of water and chemical transport processes deep within sedimentary basin and accretionary-wedge environments. Consolidation and permeability studies conducted to 165 MPa (~10km depth) indicate that ultra-tight clay formations (10-18 m2 to10-21 m2) can substantially modify the fluids migrating through then. Pore-water extractions conducted on smectite/illite rich core samples obtained from 1-3 km depths at IODP (NanTroSEIZE, Chikyu) deep-riser drilling Site C0002, at the elevated loads required to squeeze waters from such deeply buried sediment (stresses up to 100 MPa),resulted in anomalous patterns of sequential freshening with progressive loading. More accurate laboratory investigations (both incremental loading and Constant Rate of Strain test) revealed that such freshening initiates above 20 MPa and progresses with consolidation to become greater than 20% by effective normal load of 165 MPa. Log-log plots of stress vs. hydraulic conductivity reveal that trends remain linear to elevated stresses and total porosities as low at 14%. The implications are that stress induced smectite dehydration and/or membrane filtration effects cause remarkable changes in pore water chemistry with fluid migration through deep, tight, clay-rich formations. These changes should occur in addition to any thermally induced diagenetic and clay-dehydration effects on pore water chemistry. Work is progressing to evaluate the impact of clay composition and temperature to ascertain if purely illitic compositions show similar trends and if the mass fractionation of water and other isotopes also occurs. Such studies will ascertain if the presence of smectite is a prerequisite for freshening or if membrane filtration is a major process in earth systems containing common clay minerals. The results have major implications for interpretations of mass chemical balances, pore water profiles, and the hydrologic, geochemical, and stress state controls on deep system behavior in all deep accretionary wedge and basin environments where clays are abundant. This research used samples provided by the International Ocean Discovery Program (IODP).

[Responses of Cynodon dactylon population in hydro-fluctuation belt of Three Gorges Reservoir area to flooding-drying habitat change].

PubMed

Hong, Ming; Guo, Quan-Shu; Nie, Bi-Hong; Kang, Yi; Pei, Shun-Xiang; Jin, Jiang-Qun; Wang, Xiang-Fu

2011-11-01

This paper studied the population density, morphological characteristics, and biomass and its allocation of Cynodon dactylon at different altitudinal sections of the hydro-fluctuation belt in Three Gorges Reservoir area, based on located observations. At the three altitudinal sections, the population density of C. dactylon was in the order of shallow water section (165-170 m elevation) > non-flooded section (above 172 m elevation) > deep water section (145-150 m elevation), the root diameter and root length were in the order of deep water section > shallow water section > non-flooded section, the total biomass, root biomass, stem biomass, leaf biomass, and stem biomass allocation ratio were in the order of the shallow water section > non-flooded section > deep water section, and the root biomass allocation ratio, leaf biomass allocation ratio, and underground biomass/aboveground biomass were in the order of deep water section > shallow water section > non-flooded section. The unique adaption strategies of C. dactylon to the flooding-drying habitat change in the shallow water section were the accelerated elongation growth and the increased stem biomass allocation, those in the deep water section were the increased node number of primary and secondary branches, increased number of the branches, and increased leaf biomass allocation, whereas the common strategies in the shallow and deep water sections were the accelerated root growth and the increased tillering and underground biomass allocation for preparing nutrition and energy for the rapid growth in terrestrial environment.

Deep-Water Benthic Foraminifers from the Paleocene and Eocene of the North Pacific Region: Paleontology, Biostratigraphy, and Paleoceanological Reconstructions

NASA Astrophysics Data System (ADS)

Olshanetskiy, D. M.

2015-12-01

A zonal scheme for the Lower Paleogene of the northern Pacific Ocean is proposed on the basis of the stratigraphic distribution of benthic foraminifers in the lower bathyal-abyssal beds studied in boreholes in the North and South Pacific regions. This scheme includes eight subdivisions (six zones and two subzones). The boundaries of the benthic zonal subdivisions are defined by bioevents (appearance or disappearance of stratigraphically important taxa) and are linked to the zonal scales based on planktonic foraminifers and calcareous nannoplankton. It is established that most of these bioevents are recognized subglobally. Apart from the evolutionary events, changes in the deep-water benthic foraminiferal assemblages were caused by changes in the paleooceanological environment. This allowed detailed characterization of a global mass extinction of assemblages of deep-water benthic foraminifers in the region studied. It is also established that changes in the assemblages of deep-water benthic foraminifers, observed in either change in their taxonomic composition or changes in abundance and diversity, resulted from the presence of different deep-water masses in the region.

Ecohydrological control of deep drainage in arid and semiarid regions

USGS Publications Warehouse

Seyfried, M.S.; Schwinning, S.; Walvoord, Michelle Ann; Pockman, W. T.; Newman, B.D.; Jackson, R.B.; Phillips, F.M.

2005-01-01

The amount and spatial distribution of deep drainage (downward movement of water across the bottom of the root zone) and groundwater recharge affect the quantity and quality of increasingly limited groundwater in arid and semiarid regions. We synthesize research from the fields of ecology and hydrology to address the issue of deep drainage in arid and semiarid regions. We start with a recently developed hydrological model that accurately simulates soil water potential and geochemical profiles measured in thick (>50 m), unconsolidated vadose zones. Model results indicate that, since the climate change that marked the onset of the Holocene period 10 000–15 000 years ago, there has been no deep drainage in vegetated interdrainage areas and that continuous, relatively low (<−1 MPa) soil water potentials have been maintained at depths of 2–3 m. A conceptual model consistent with these results proposes that the native, xeric‐shrub‐dominated, plant communities that gained dominance during the Holocene generated and maintained these conditions. We present three lines of ecological evidence that support the conceptual model. First, xeric shrubs have sufficiently deep rooting systems with low extraction limits to generate the modeled conditions. Second, the characteristic deep‐rooted soil–plant systems store sufficient water to effectively buffer deep soil from climatic fluctuations in these dry environments, allowing stable conditions to persist for long periods of time. And third, adaptations resulting in deep, low‐extraction‐limit rooting systems confer significant advantages to xeric shrubs in arid and semiarid environments. We then consider conditions in arid and semiarid regions in which the conceptual model may not apply, leading to the expectation that portions of many arid and semiarid watersheds supply some deep drainage. Further ecohydrologic research is required to elucidate critical climatic and edaphic thresholds, evaluate the role of important physiological processes (such as hydraulic redistribution), and evaluate the role of deep roots in terms of carbon costs, nutrient uptake, and whole‐plant development.

Effects of molecular weight of natural organic matter on cadmium mobility in soil environments and its carbon isotope characteristics.

PubMed

Mahara, Y; Kubota, T; Wakayama, R; Nakano-Ohta, T; Nakamura, T

2007-11-15

We investigated the role of natural organic matter in cadmium mobility in soil environments. We collected the dissolved organic matter from two different types of natural waters: pond surface water, which is oxic, and deep anoxic groundwater. The collected organic matter was fractionated into four groups with molecular weights (unit: Da (Daltons)) of <1 x 10(3), 1-10 x 10(3), 10-100 x 10(3), and >100 x 10(3). The organic matter source was land plants, based on the carbon isotope ratios (delta(13)C/(12)C). The organic matter in surface water originated from presently growing land plants, based on (14)C dating, but the organic matter in deep groundwater originated from land plants that grew approximately 4000 years ago. However, some carbon was supplied by the high-molecular-weight fraction of humic substances in soil or sediments. Cadmium interacted in a system of siliceous sand, fractionated organic matter, and water. The lowest molecular weight fraction of organic matter (<1 x 10(3)) bound more cadmium than did the higher molecular weight fractions. Organic matter in deep groundwater was more strongly bound to cadmium than was organic matter in surface water. The binding behaviours of organic matter with cadmium depended on concentration, age, molecular weight, and degradation conditions of the organic matter in natural waters. Consequently, the dissolved, low-molecular-weight fraction in organic matter strongly influences cadmium migration and mobility in the environment.

Autonomous, Retrievable, Deep Sea Microbial Fuel Cell

NASA Astrophysics Data System (ADS)

Richter, K.

2014-12-01

Microbial fuel cells (MFCs) work by providing bacteria in anaerobic sediments with an electron acceptor (anode) that stimulates metabolism of organic matter. The buried anode is connected via control circuitry to a cathode exposed to oxygen in the overlying water. During metabolism, bacteria release hydrogen ions into the sediment and transfer electrons extra-cellularly to the anode, which eventually reduce dissolved oxygen at the cathode, forming water. The open circuit voltage is approximately 0.8 v. The voltage between electrodes is operationally kept at 0.4 v with a potentiastat. The current is chiefly limited by the rate of microbial metabolism at the anode. The Office of Naval Research has encouraged development of microbial fuel cells in the marine environment at a number of academic and naval institutions. Earlier work in shallow sediments of San Diego Bay showed that the most important environmental parameters that control fuel cell power output in San Diego Bay were total organic carbon in the sediment and seasonal water temperature. Current MFC work at SPAWAR includes extension of microbial fuel cell tests to the deep sea environment (>1000 m) and, in parallel, testing microbial fuel cells in the laboratory under deep sea conditions. One question we are asking is whether MFC power output from deep water sediments repressurized and chilled in the laboratory comparable to those measured in situ. If yes, mapping the power potential of deep sea sediments may be made much easier, requiring sediment grabs and lab tests rather than deployment and retrieval of fuel cells. Another question we are asking is whether in situ temperature and total organic carbon in the deep sea sediment can predict MFC power. If yes, then we can make use of the large collection of publicly available, deep sea oceanographic measurements to make these predictions, foregoing expensive work at sea. These regressions will be compared to those derived from shallow water measurements.

Long Range Effect of The M7.8 April 2015 Nepal Earth Quake on the Deep Groudwater Outflow in a Thousand-Mile-Away Geothermal Field in Southern China's Guangdong

NASA Astrophysics Data System (ADS)

Lu, G.; Yu, S.; Xu, F.; Wang, X.; Yan, K.; Yuen, D. A.

2015-12-01

Deep ground waters sustain high temperature and pressure and are susceptible to impact from an earthquake. How an earthquake would have been associated with long-range effect on geological environment of deep groundwater is a question of interest to the scientific community and general public. The massive Richter 8.1 Nepal Earthquake (on April 25, 2015) provided a rare opportunity to test the response of deep groundwater systems. Deep ground waters at elevated temperature would naturally flow to ground surface along preferential flow path such as a deep fault, forming geothermal water flows. Geothermal water flows are susceptible to stress variation and can reflect the physical conditions of supercritical hot water kilometers deep down inside the crust. This paper introduces the monitoring work on the outflow in Xijiang Geothermal Field of Xinyi City, Guangdong Province in southern China. The geothermal field is one of typical geothermal fields with deep faults in Guangdong. The geothermal spring has characteristic daily variation of up to 72% in flow rate, which results from being associated with a north-south run deep fault susceptible to earthquake event. We use year-long monitoring data to illustrate how the Nepal earthquake would have affected the flows at the field site over 2.5 thousand kilometers away. The irregularity of flow is judged by deviation from otherwise good correlation of geothermal spring flow with solid earth tidal waves. This work could potentially provide the basis for further study of deep groundwater systems and insight to earthquake prediction.

Microplastic pollution in deep-sea sediments.

PubMed

Van Cauwenberghe, Lisbeth; Vanreusel, Ann; Mees, Jan; Janssen, Colin R

2013-11-01

Microplastics are small plastic particles (<1 mm) originating from the degradation of larger plastic debris. These microplastics have been accumulating in the marine environment for decades and have been detected throughout the water column and in sublittoral and beach sediments worldwide. However, up to now, it has never been established whether microplastic presence in sediments is limited to accumulation hot spots such as the continental shelf, or whether they are also present in deep-sea sediments. Here we show, for the first time ever, that microplastics have indeed reached the most remote of marine environments: the deep sea. We found plastic particles sized in the micrometre range in deep-sea sediments collected at four locations representing different deep-sea habitats ranging in depth from 1100 to 5000 m. Our results demonstrate that microplastic pollution has spread throughout the world's seas and oceans, into the remote and largely unknown deep sea. Copyright © 2013. Published by Elsevier Ltd.

Bathyal sea urchins of the Bahamas, with notes on covering behavior in deep sea echinoids (Echinodermata: Echinoidea)

NASA Astrophysics Data System (ADS)

Pawson, David L.; Pawson, Doris J.

2013-08-01

In a survey of the bathyal echinoderms of the Bahama Islands region using manned submersibles, approximately 200 species of echinoderms were encountered and documented; 33 species were echinoids, most of them widespread in the general Caribbean area. Three species were found to exhibit covering behavior, the piling of debris on the upper surface of the body. Active covering is common in at least 20 species of shallow-water echinoids, but it has been reliably documented previously only once in deep-sea habitats. Images of covered deep-sea species, and other species of related interest, are provided. Some of the reasons adduced in the past for covering in shallow-water species, such as reduction of incident light intensity, physical camouflage, ballast in turbulent water, protection from desiccation, presumably do not apply in bathyal species. The main reasons for covering in deep, dark, environments are as yet unknown. Some covering behavior in the deep sea may be related to protection of the genital pores, ocular plates, or madreporite. Covering in some deep-sea species may also be merely a tactile reflex action, as some authors have suggested for shallow-water species.

Deep-water longline fishing has reduced impact on Vulnerable Marine Ecosystems

PubMed Central

Pham, Christopher K.; Diogo, Hugo; Menezes, Gui; Porteiro, Filipe; Braga-Henriques, Andreia; Vandeperre, Frederic; Morato, Telmo

2014-01-01

Bottom trawl fishing threatens deep-sea ecosystems, modifying the seafloor morphology and its physical properties, with dramatic consequences on benthic communities. Therefore, the future of deep-sea fishing relies on alternative techniques that maintain the health of deep-sea ecosystems and tolerate appropriate human uses of the marine environment. In this study, we demonstrate that deep-sea bottom longline fishing has little impact on vulnerable marine ecosystems, reducing bycatch of cold-water corals and limiting additional damage to benthic communities. We found that slow-growing vulnerable species are still common in areas subject to more than 20 years of longlining activity and estimate that one deep-sea bottom trawl will have a similar impact to 296–1,719 longlines, depending on the morphological complexity of the impacted species. Given the pronounced differences in the magnitude of disturbances coupled with its selectivity and low fuel consumption, we suggest that regulated deep-sea longlining can be an alternative to deep-sea bottom trawling. PMID:24776718

Spatial distribution of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems.

PubMed

Takai, Ken; Oida, Hanako; Suzuki, Yohey; Hirayama, Hisako; Nakagawa, Satoshi; Nunoura, Takuro; Inagaki, Fumio; Nealson, Kenneth H; Horikoshi, Koki

2004-04-01

Distribution profiles of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems were mapped with culture-independent molecular techniques. Planktonic samples were obtained from the waters surrounding two geographically and geologically distinct hydrothermal systems, and the abundance of marine crenarchaeota group I was examined by 16S ribosomal DNA clone analysis, quantitative PCR, and whole-cell fluorescence in situ hybridization. A much higher proportion of marine crenarchaeota group I within the microbial community was detected in deep-sea hydrothermal environments than in normal deep and surface seawaters. The highest proportion was always obtained from the ambient seawater adjacent to hydrothermal emissions and chimneys but not from the hydrothermal plumes. These profiles were markedly different from the profiles of epsilon-Proteobacteria, which are abundant in the low temperatures of deep-sea hydrothermal environments.

Light field and water clarity simulation of natural environments in laboratory conditions

NASA Astrophysics Data System (ADS)

Pe'eri, Shachak; Shwaery, Glenn

2012-06-01

Simulation of natural oceanic conditions in a laboratory setting is a challenging task, especially when that environment can be miles away. We present an attempt to replicate the solar radiation expected at different latitudes with varying water clarity conditions up to 30 m in depth using a 2.5 m deep engineering tank at the University of New Hampshire. The goals of the study were: 1) to configure an underwater light source that produced an irradiance spectrum similar to natural daylight with the sun at zenith and at 60° under clear atmospheric conditions, and 2) to monitor water clarity as a function of depth. Irradiance was measured using a spectra-radiometer with a cosine receiver to analyze the output spectrum of submersed lamps as a function of distance. In addition, an underwater reflection method was developed to measure the diffuse attenuation coefficient in real time. Two water clarity types were characterized, clear waters representing deep, open-ocean conditions, and murky waters representing littoral environments. Results showed good correlation between the irradiance measured at 400 nm to 600 nm and the natural daylight spectrum at 3 m from the light source. This can be considered the water surface conditions reference. Using these methodologies in a controlled laboratory setting, we are able to replicate illumination and water conditions to study the physical, chemical and biological processes on natural and man-made objects and/or systems in simulated, varied geographic locations and environments.

Water mass dynamics shape Ross Sea protist communities in mesopelagic and bathypelagic layers

NASA Astrophysics Data System (ADS)

Zoccarato, Luca; Pallavicini, Alberto; Cerino, Federica; Fonda Umani, Serena; Celussi, Mauro

2016-12-01

Deep-sea environments host the largest pool of microbes and represent the last largely unexplored and poorly known ecosystems on Earth. The Ross Sea is characterized by unique oceanographic dynamics and harbors several water masses deeply involved in cooling and ventilation of deep oceans. In this study the V9 region of the 18S rDNA was targeted and sequenced with the Ion Torrent high-throughput sequencing technology to unveil differences in protist communities (>2 μm) correlated with biogeochemical properties of the water masses. The analyzed samples were significantly different in terms of environmental parameters and community composition outlining significant structuring effects of temperature and salinity. Overall, Alveolata (especially Dinophyta), Stramenopiles and Excavata groups dominated mesopelagic and bathypelagic layers, and protist communities were shaped according to the biogeochemistry of the water masses (advection effect and mixing events). Newly-formed High Salinity Shelf Water (HSSW) was characterized by high relative abundance of phototrophic organisms that bloom at the surface during the austral summer. Oxygen-depleted Circumpolar Deep Water (CDW) showed higher abundance of Excavata, common bacterivores in deep water masses. At the shelf-break, Antarctic Bottom Water (AABW), formed by the entrainment of shelf waters in CDW, maintained the eukaryotic genetic signature typical of both parental water masses.

The Secret to Successful Deep-Sea Invasion: Does Low Temperature Hold the Key?

PubMed Central

Smith, Kathryn E.; Thatje, Sven

2012-01-01

There is a general consensus that today’s deep-sea biodiversity has largely resulted from recurrent invasions and speciations occurring through homogenous waters during periods of the Phanerozoic eon. Migrations likely continue today, primarily via isothermal water columns, such as those typical of Polar Regions, but the necessary ecological and physiological adaptations behind them are poorly understood. In an evolutionary context, understanding the adaptations, which allow for colonisation to high-pressure environments, may enable us to predict future events. In this investigation, we examine pressure tolerance during development, in the shallow-water neogastropod Buccinum undatum using thermally acclimated egg masses from temperate and sub-polar regions across the species range. Fossil records indicate neogastropods to have a deep-water origin, suggesting shallow-water species may be likely candidates for re-emergence into the deep sea. Our results show population level differences in physiological thresholds, which indicate low temperature acclimation to increase pressure tolerance. These findings imply this species is capable of deep-sea penetration through isothermal water columns prevailing at high latitudes. This study gives new insight into the fundamentals behind past and future colonisation events. Such knowledge is instrumental to understand better how changes in climate envelopes affect the distribution and radiation of species along latitudinal as well as bathymetric temperature gradients. PMID:23227254

The secret to successful deep-sea invasion: does low temperature hold the key?

PubMed

Smith, Kathryn E; Thatje, Sven

2012-01-01

There is a general consensus that today's deep-sea biodiversity has largely resulted from recurrent invasions and speciations occurring through homogenous waters during periods of the Phanerozoic eon. Migrations likely continue today, primarily via isothermal water columns, such as those typical of Polar Regions, but the necessary ecological and physiological adaptations behind them are poorly understood. In an evolutionary context, understanding the adaptations, which allow for colonisation to high-pressure environments, may enable us to predict future events. In this investigation, we examine pressure tolerance during development, in the shallow-water neogastropod Buccinum undatum using thermally acclimated egg masses from temperate and sub-polar regions across the species range. Fossil records indicate neogastropods to have a deep-water origin, suggesting shallow-water species may be likely candidates for re-emergence into the deep sea. Our results show population level differences in physiological thresholds, which indicate low temperature acclimation to increase pressure tolerance. These findings imply this species is capable of deep-sea penetration through isothermal water columns prevailing at high latitudes. This study gives new insight into the fundamentals behind past and future colonisation events. Such knowledge is instrumental to understand better how changes in climate envelopes affect the distribution and radiation of species along latitudinal as well as bathymetric temperature gradients.

Heterotrophic Protists in Hypersaline Microbial Mats and Deep Hypersaline Basin Water Columns

PubMed Central

Edgcomb, Virginia P.; Bernhard, Joan M.

2013-01-01

Although hypersaline environments pose challenges to life because of the low water content (water activity), many such habitats appear to support eukaryotic microbes. This contribution presents brief reviews of our current knowledge on eukaryotes of water-column haloclines and brines from Deep Hypersaline Anoxic Basins (DHABs) of the Eastern Mediterranean, as well as shallow-water hypersaline microbial mats in solar salterns of Guerrero Negro, Mexico and benthic microbialite communities from Hamelin Pool, Shark Bay, Western Australia. New data on eukaryotic diversity from Shark Bay microbialites indicates eukaryotes are more diverse than previously reported. Although this comparison shows that eukaryotic communities in hypersaline habitats with varying physicochemical characteristics are unique, several groups are commonly found, including diverse alveolates, strameonopiles, and fungi, as well as radiolaria. Many eukaryote sequences (SSU) in both regions also have no close homologues in public databases, suggesting that these environments host unique microbial eukaryote assemblages with the potential to enhance our understanding of the capacity of eukaryotes to adapt to hypersaline conditions. PMID:25369746

A new look at deep-sea video

USGS Publications Warehouse

Chezar, H.; Lee, J.

1985-01-01

A deep-towed photographic system with completely self-contained recording instrumentation and power can obtain color-video and still-photographic transects along rough terrane without need for a long electrically conducting cable. Both the video- and still-camera systems utilize relatively inexpensive and proven off-the-shelf hardware adapted for deep-water environments. The small instrument frame makes the towed sled an ideal photographic tool for use on ship or small-boat operations. The system includes a temperature probe and altimeter that relay data acoustically from the sled to the surface ship. This relay enables the operator to monitor simultaneously water temperature and the precise height off the bottom. ?? 1985.

Observations of open-ocean deep convection in the northwestern Mediterranean Sea: Seasonal and interannual variability of mixing and deep water masses for the 2007-2013 Period

NASA Astrophysics Data System (ADS)

Houpert, L.; Durrieu de Madron, X.; Testor, P.; Bosse, A.; D'Ortenzio, F.; Bouin, M. N.; Dausse, D.; Le Goff, H.; Kunesch, S.; Labaste, M.; Coppola, L.; Mortier, L.; Raimbault, P.

2016-11-01

We present here a unique oceanographic and meteorological data set focus on the deep convection processes. Our results are essentially based on in situ data (mooring, research vessel, glider, and profiling float) collected from a multiplatform and integrated monitoring system (MOOSE: Mediterranean Ocean Observing System on Environment), which monitored continuously the northwestern Mediterranean Sea since 2007, and in particular high-frequency potential temperature, salinity, and current measurements from the mooring LION located within the convection region. From 2009 to 2013, the mixed layer depth reaches the seabed, at a depth of 2330m, in February. Then, the violent vertical mixing of the whole water column lasts between 9 and 12 days setting up the characteristics of the newly formed deep water. Each deep convection winter formed a new warmer and saltier "vintage" of deep water. These sudden inputs of salt and heat in the deep ocean are responsible for trends in salinity (3.3 ± 0.2 × 10-3/yr) and potential temperature (3.2 ± 0.5 × 10-3 C/yr) observed from 2009 to 2013 for the 600-2300 m layer. For the first time, the overlapping of the three "phases" of deep convection can be observed, with secondary vertical mixing events (2-4 days) after the beginning of the restratification phase, and the restratification/spreading phase still active at the beginning of the following deep convection event.

Water Immersion Affects Episodic Memory and Postural Control in Healthy Older Adults.

PubMed

Bressel, Eadric; Louder, Talin J; Raikes, Adam C; Alphonsa, Sushma; Kyvelidou, Anastasia

2018-05-04

Previous research has reported that younger adults make fewer cognitive errors on an auditory vigilance task while in chest-deep water compared with on land. The purpose of this study was to extend this previous work to include older adults and to examine the effect of environment (water vs land) on linear and nonlinear measures of postural control under single- and dual-task conditions. Twenty-one older adult participants (age = 71.6 ± 8.34 years) performed a cognitive (auditory vigilance) and motor (standing balance) task separately and simultaneously on land and in chest-deep water. Listening errors (n = count) from the auditory vigilance test and sample entropy (SampEn), center of pressure area, and velocity for the balance test served as dependent measures. Environment (land vs water) and task (single vs dual) comparisons were made with a Wilcoxon matched-pair test. Listening errors were 111% greater during land than during water environments (single-task = 4.0 ± 3.5 vs 1.9 ± 1.7; P = .03). Conversely, SampEn values were 100% greater during water than during land environments (single-task = 0.04 ± 0.01 vs 0.02 ± 0.01; P < .001). Center of pressure area and velocity followed a similar trend to SampEn with respect to environment differences, and none of the measures were different between single- and dual-task conditions (P > .05). The findings of this study expand current support for the potential use of partial aquatic immersion as a viable method for challenging both cognitive and motor abilities in older adults.

Hydrogeochemistry Characteristics and Daily Variation of Geothermal Water in the Moxi Fault,Southwest of China

NASA Astrophysics Data System (ADS)

Qi, Jihong; Xu, Mo; An, Chenjiao; Zhang, Yunhui; Zhang, Qiang

2017-04-01

The Xianshuihe Fault with frequent earthquakes activities is the regional deep fault in China. The Moxi Fault is the southern part of the Xianshuihe Fault, where the strong activities of geothermal water could bring abundant information of deep crust. In this article, some typical geothermal springs were collected along the Moxi fault from Kangding to Shimian. Using the the Na-K-Mg equilibrium diagram, it explains the state of water-rock equilibrium, and estimates the reservoir temperature basing appropriate geothermometers. Basing on the relationship between the enthalpy and chlorine concentration of geothermal water, it analyze the mixing progress of thermal water with shallow groundwater. Moreover, the responses of variation of geothermal water to the solid tides are considered to study the hydrothermal activities of this fault. The Guanding in Kangding are considered as the center of the geothermal system, and the hydrothermal activities decrease southward extending. Geothermal water maybe is heated by the deep heat source of the Himalayan granites, while the springs in the south area perform the mixture with thermal water in the sub-reservoir of the Permian crystalline limestone. It improves the research of hydrothermal activities in the Moxi Fault, meanwhile using the variation of geothermal water maybe become a important method to study the environment of deep earth in the future.

Copper-nickel-rich, amalgamated ferromanganese crust-nodule deposits from Shatsky Rise, NW Pacific

USGS Publications Warehouse

Hein, J.R.; Conrad, T.A.; Frank, M.; Christl, M.; Sager, W.W.

2012-01-01

A unique set of ferromanganese crusts and nodules collected from Shatsky Rise (SR), NW Pacific, were analyzed for mineralogical and chemical compositions, and dated using Be isotopes and cobalt chronometry. The composition of these midlatitude, deep-water deposits is markedly different from northwest-equatorial Pacific (PCZ) crusts, where most studies have been conducted. Crusts and nodules on SR formed in close proximity and some nodule deposits were cemented and overgrown by crusts, forming amalgamated deposits. The deep-water SR crusts are high in Cu, Li, and Th and low in Co, Te, and Tl concentrations compared to PCZ crusts. Thorium concentrations (ppm) are especially striking with a high of 152 (mean 56), compared to PCZ crusts (mean 11). The deep-water SR crusts show a diagenetic chemical signal, but not a diagenetic mineralogy, which together constrain the redox conditions to early oxic diagenesis. Diagenetic input to crusts is rare, but unequivocal in these deep-water crusts. Copper, Ni, and Li are strongly enriched in SR deep-water deposits, but only in layers older than about 3.4 Ma. Diagenetic reactions in the sediment and dissolution of biogenic calcite in the water column are the likely sources of these metals. The highest concentrations of Li are in crust layers that formed near the calcite compensation depth. The onset of Ni, Cu, and Li enrichment in the middle Miocene and cessation at about 3.4 Ma were accompanied by changes in the deep-water environment, especially composition and flow rates of water masses, and location of the carbonate compensation depth.

A micropalaeontological perspective on export productivity, oxygenation and temperature in NE Atlantic deep-waters across Terminations I and II

NASA Astrophysics Data System (ADS)

Grunert, Patrick; Skinner, Luke; Hodell, David A.; Piller, Werner E.

2015-08-01

Census counts of benthic foraminifera were studied from the SW Iberian Margin to reconstruct past changes in deep-water hydrography across Terminations I and II. Detailed benthic faunal data (> 125 μm size-fraction) allow us to evaluate the limitations imposed by taphonomic processes and restricted size-fractions. The comparison of recent (mudline) and fossil assemblages at IODP Site U1385 indicates the quick post-mortem disintegration of shells of astrorhizoid taxa (~ 80% of the present-day fauna), resulting in impoverished fossil assemblages. While the application of quantitative proxy methods is problematic under these circumstances, the fossil assemblages can still provide a qualitative palaeoenvironmental signal that, while most fully expressed in the 125-212 μm size-fraction, is nonetheless also expressed to some degree in the > 212 μm size-fraction. Variations in the benthic foraminiferal assemblages reveal information about changing organic matter supply, deep-water oxygenation and temperature. MIS 2 is generally characterized by an elevated trophic state and variable oxic conditions, with oxygenation minima culminating in the Younger Dryas (YD) and Heinrich Stadials (HS) 1, 2 and 3. Low oxic conditions coincide with decreased water-temperature and lower benthic δ13C, pointing to the strong influence of a southern sourced water-mass during these periods. HS 1 is the most extreme of these intervals, providing further evidence for a severe temporary reduction or even shutdown of AMOC. With the inception of MIS 1, organic matter supply reduced and a better ventilated deep-water environment bathed by NEADW is established. For Termination II, clear indications of southern-sourced water are limited to the early phase of HS 11. During the latter part of HS 11, the deep-water environment seems to be determined by strongly increased supply of organic matter, potentially explaining the decoupling of benthic δ13C and Mg/Ca records of earlier studies as a phytodetritus effect on the carbon isotope signal. However, the presence of a warm, nutrient-rich and poorly oxygenated water-mass cannot be ruled out. With the inception of interglacial MIS 5e trophic conditions are reduced and ventilation by NEADW increases.

The Limits of Life in the Deep Subsurface - Implications for the Origin of Life

NASA Astrophysics Data System (ADS)

Baross, John

2013-06-01

There are very few environments on Earth where life is absent. Microbial life has proliferated into habitats that span nearly every imaginable physico-chemical variable. Only the availability of liquid water and temperature are known to prevent the growth of organisms. The other extreme physical and chemical variables, such as pH, pressure, high concentrations of solutes, damaging radiation, and toxic metals, are life-prohibiting factors for most organisms but not for all. The deep subsurface environments span all of the extreme conditions encountered by life including habitat conditions not yet explored, such as those that combine high temperature, high and low pH and extreme pressures. Some of the ``extremophile'' microorganisms inhabiting the deep subsurface environments have been shown to be among the most ``ancient'' of extant life. Their genomes and physiologies have led to a broader understanding of the geological settings of early life, the most ancient energy pathways, and the importance of water/rock interactions and tectonics in the origin and early evolution of life. The case can now be made that deep subsurface environments contributed to life's origin and provided the habitat(s) for the earliest microbial communities. However, there is much more to be done to further our understanding on the role of moderate to high pressures and temperatures on the chemical and biochemical ``steps'' leading to life, and on the evolution and physiology of both ancient and present-day subsurface microbial communities.

Deep sea microbial fuel cell output as a proxy for microbial activity

NASA Astrophysics Data System (ADS)

Richter, K.; George, R.; Hardy, K. R.

2016-02-01

Abstract: Microbial fuel cells (MFCs) work by providing bacteria in anaerobic sediments with an electron acceptor (anode) that stimulates metabolism of organic matter. The buried anode is connected via control circuitry to a cathode exposed to oxygen in the overlying water. During metabolism, bacteria release hydrogen ions into the sediment and transfer electrons extra-cellularly to the anode, which eventually reduce dissolved oxygen at the cathode, forming water. The current is chiefly limited by the rate of microbial metabolism at the anode and serves as a proxy for microbial activity. The Office of Naval Research has encouraged development of microbial fuel cells in the marine environment at a number of academic and naval institutions and studies of important environmental parameters that affect fuel cell performance. Earlier work in shallow sediments of San Diego Bay showed that the most important environmental parameters that control fuel cell power output in San Diego Bay were total organic carbon in the sediment and seasonal water temperature. Current MFC work at SPAWAR includes extension of microbial fuel cell tests to the deep sea environment (>4000 m) and, in parallel, testing microbial fuel cells in the laboratory under deep sea conditions. We are pursuing a field efforts to deploy a microbial fuel cell in progressively deeper water, record in situ power and temperature over several weeks, and retrieve the fuel cell along with sediment samples for analysis. We are also pursuing a laboratory effort to build a matching microbial fuel cell in a pressure vessel capable of matching the pressure and temperature of deep water, and stocking the pressure vessel with deep water sediment in order to take measurements analogous to those in the field. We also hope to determine whether bacteria growing on the anode are different from bacteria growing in the bulk sediment via DNA analysis. The current progress and results from this work at SPAWAR will be presented.

Metagenomic Analysis of Genes Encoding Nutrient Cycling Pathways in the Microbiota of Deep-Sea and Shallow-Water Sponges.

PubMed

Li, Zhiyong; Wang, Yuezhu; Li, Jinlong; Liu, Fang; He, Liming; He, Ying; Wang, Shenyue

2016-12-01

Sponges host complex symbiotic communities, but to date, the whole picture of the metabolic potential of sponge microbiota remains unclear, particularly the difference between the shallow-water and deep-sea sponge holobionts. In this study, two completely different sponges, shallow-water sponge Theonella swinhoei from the South China Sea and deep-sea sponge Neamphius huxleyi from the Indian Ocean, were selected to compare their whole symbiotic communities and metabolic potential, particularly in element transformation. Phylogenetically diverse bacteria, archaea, fungi, and algae were detected in both shallow-water sponge T. swinhoei and deep-sea sponge N. huxleyi, and different microbial community structures were indicated between these two sponges. Metagenome-based gene abundance analysis indicated that, though the two sponge microbiota have similar core functions, they showed different potential strategies in detailed metabolic processes, e.g., in the transformation and utilization of carbon, nitrogen, phosphorus, and sulfur by corresponding microbial symbionts. This study provides insight into the putative metabolic potentials of the microbiota associated with the shallow-water and deep-sea sponges at the whole community level, extending our knowledge of the sponge microbiota's functions, the association of sponge- microbes, as well as the adaption of sponge microbiota to the marine environment.

Disturbance of deep-sea environments induced by the M9.0 Tohoku Earthquake

PubMed Central

Kawagucci, Shinsuke; Yoshida, Yukari T.; Noguchi, Takuroh; Honda, Makio C.; Uchida, Hiroshi; Ishibashi, Hidenori; Nakagawa, Fumiko; Tsunogai, Urumu; Okamura, Kei; Takaki, Yoshihiro; Nunoura, Takuro; Miyazaki, Junichi; Hirai, Miho; Lin, Weiren; Kitazato, Hiroshi; Takai, Ken

2012-01-01

The impacts of the M9.0 Tohoku Earthquake on deep-sea environment were investigated 36 and 98 days after the event. The light transmission anomaly in the deep-sea water after 36 days became atypically greater (∼35%) and more extensive (thickness ∼1500 m) near the trench axis owing to the turbulent diffusion of fresh seafloor sediment, coordinated with potential seafloor displacement. In addition to the chemical influx associated with sediment diffusion, an influx of 13C-enriched methane from the deep sub-seafloor reservoirs was estimated. This isotopically unusual methane influx was possibly triggered by the earthquake and its aftershocks that subsequently induced changes in the sub-seafloor hydrogeologic structures. The whole prokaryotic biomass and the development of specific phylotypes in the deep-sea microbial communities could rise and fall at 36 and 98 days, respectively, after the event. We may capture the snap shots of post-earthquake disturbance in deep-sea chemistry and microbial community responses. PMID:22355782

Deep subsurface microbial processes

USGS Publications Warehouse

Lovley, D.R.; Chapelle, F.H.

1995-01-01

Information on the microbiology of the deep subsurface is necessary in order to understand the factors controlling the rate and extent of the microbially catalyzed redox reactions that influence the geophysical properties of these environments. Furthermore, there is an increasing threat that deep aquifers, an important drinking water resource, may be contaminated by man's activities, and there is a need to predict the extent to which microbial activity may remediate such contamination. Metabolically active microorganisms can be recovered from a diversity of deep subsurface environments. The available evidence suggests that these microorganisms are responsible for catalyzing the oxidation of organic matter coupled to a variety of electron acceptors just as microorganisms do in surface sediments, but at much slower rates. The technical difficulties in aseptically sampling deep subsurface sediments and the fact that microbial processes in laboratory incubations of deep subsurface material often do not mimic in situ processes frequently necessitate that microbial activity in the deep subsurface be inferred through nonmicrobiological analyses of ground water. These approaches include measurements of dissolved H2, which can predict the predominant microbially catalyzed redox reactions in aquifers, as well as geochemical and groundwater flow modeling, which can be used to estimate the rates of microbial processes. Microorganisms recovered from the deep subsurface have the potential to affect the fate of toxic organics and inorganic contaminants in groundwater. Microbial activity also greatly influences 1 the chemistry of many pristine groundwaters and contributes to such phenomena as porosity development in carbonate aquifers, accumulation of undesirably high concentrations of dissolved iron, and production of methane and hydrogen sulfide. Although the last decade has seen a dramatic increase in interest in deep subsurface microbiology, in comparison with the study of other habitats, the study of deep subsurface microbiology is still in its infancy.

Sedimentary and Paleoceanographic Responses to the South China Sea Basin Evolution

NASA Astrophysics Data System (ADS)

Jian, Z.; Liu, Z.; Jin, H.; Larsen, H. C.; Alvarez Zarikian, C. A.; Stock, J. M.; Sun, Z.; Klaus, A.

2017-12-01

As the largest marginal sea of the western Pacific, the South China Sea (SCS) has experienced a complete Wilson cycle, which had inevitably exerted a profound impact on the sedimentary environment and ocean circulation. Based on the results of four ODP/IODP expeditions to the SCS since 1999, together with other research data in this region, this study aims to explore the sedimentary and paleoceanographic responses to the tectonic events and basin evolution in the SCS. The early history of the SCS from land to deep sea was revealed by foraminiferal fauna: (1) The SCS evolved from continental shelf to an upper bathyal environment around the Oligocene/Eocene boundary, and significantly deepened at the turn of Oligocene/Miocene; (2) The early Oligocene SCS was deep but its shelf was narrow, evidenced by the Para-Tethys type deep-sea agglutinated benthic foraminifers and abundant transported shallow-water species at ODP Site 1148. Along with the SCS basin formation and the development of this semi-closed basin, the deep-sea benthic foraminiferal δ13C decreased when the Antarctic ice sheet began to reestablish at 14 Ma, the Indonesian Seaway and the southern SCS deep-water channel were closed at 10 Ma, the Luzon arc collided with Taiwan at 6.5 Ma, and the Bashi Strait was restricted at 1.2 Ma. Nd isotopes of shark teeth at ODP Site 1148 also support these inferences. An early to middle Miocene succession of red clay was found at all sites deeper than 3500 m water depth, which may be correlated to a basin-wide event related to deep circulation of oxygenated water from the western Pacific. After the earliest late Miocene carbonate crash, the red clay disappeared while the large carbonate platforms were drowned and remarkably shrank in the SCS. Late Miocene sediments display a succession of hemi-pelagic and turbidite deposits, indicating that the deep basin entered its modern state below the CCD. Frequent turbidites ended when Pliocene growth of deep-sea manganese-nodules reoccurred in the SCS. The data show that the SCS can serve as a natural laboratory to study the relationship between paleoceanographic changes and tectonic events.

The modern deep water coral reefs off NW-Europe: the largest reef province in the world

NASA Astrophysics Data System (ADS)

Dullo, W. C.; Freiwald, A.

2003-04-01

Recently discovered deep-water coral reefs and coral mounds in the Procupine Seabight and in the Rockall Trough are part of a North Atlantic coral reef province, stretching from the Iberian Peninsula up to northern Norway within the intermediate water-mass. Current research activities underline the significance of these coral eco-systems as a centre of extreme high biodiversity and biomass indicated by numerous economically important nurtrients for humans as well as resources for marine biochemical products. This unexpected high biological activity along continental margins, which is responsible for the formation of 100 m high biogenic mounds, creating impressive geological reliefs, portrays the complex coupling between hydrosphere and geosphere. The geological importance of these recent and living carbonate structures is underlined by the fact that this "reef type" or mud mound is a very prominent carbon hydrogen reservoir throughout earth history. Such mud mound structures cannot be compared with any other present-day shallow water reef. Our present knowledge about reefs and carbonate production is limited to the areas of the shallow shelves mainly within the tropical region. Only few studies exist from high latitudes and from the continental margin of NW Europe. Further occurences of these deep-water mounds have recently been discovered off West Africa and off SE Brasilia within the frame of exploration activities. The portion of the climate-forcing greenhouse gas CO_2, stored in these mounds during glacial and interglacial times has not been introduced into model runs and prediction scenarios so far. These mounds do not depend on glacial/interglacial sea-level changes in the same way as their shallow-water counterparts do. Deep-water coral mounds react and respond to changes in the oceanographic regime and are triggered by abrupt changes within the sedimentary environment (increased erosion of shelf sediments during low stands of sea level as well as slope instabilities). These properties of modern aphotic coral mounds provide the ideal potential for the interpretation of fossil deep-water mounds in order to study their control mechanisms and their oceanographic environment.

Soil coring at multiple field environments can directly quantify variation in deep root traits to select wheat genotypes for breeding.

PubMed

Wasson, A P; Rebetzke, G J; Kirkegaard, J A; Christopher, J; Richards, R A; Watt, M

2014-11-01

We aim to incorporate deep root traits into future wheat varieties to increase access to stored soil water during grain development, which is twice as valuable for yield as water captured at younger stages. Most root phenotyping efforts have been indirect studies in the laboratory, at young plant stages, or using indirect shoot measures. Here, soil coring to 2 m depth was used across three field environments to directly phenotype deep root traits on grain development (depth, descent rate, density, length, and distribution). Shoot phenotypes at coring included canopy temperature depression, chlorophyll reflectance, and green leaf scoring, with developmental stage, biomass, and yield. Current varieties, and genotypes with breeding histories and plant architectures expected to promote deep roots, were used to maximize identification of variation due to genetics. Variation was observed for deep root traits (e.g. 111.4-178.5cm (60%) for depth; 0.09-0.22cm/°C day (144%) for descent rate) using soil coring in the field environments. There was significant variation for root traits between sites, and variation in the relative performance of genotypes between sites. However, genotypes were identified that performed consistently well or poorly at both sites. Furthermore, high-performing genotypes were statistically superior in root traits than low-performing genotypes or commercial varieties. There was a weak but significant negative correlation between green leaf score (-0.5), CTD (0.45), and rooting depth and a positive correlation for chlorophyll reflectance (0.32). Shoot phenotypes did not predict other root traits. This study suggests that field coring can directly identify variation in deep root traits to speed up selection of genotypes for breeding programmes. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Ecosystem engineering creates a direct nutritional link between 600-m deep cold-water coral mounds and surface productivity.

PubMed

Soetaert, Karline; Mohn, Christian; Rengstorf, Anna; Grehan, Anthony; van Oevelen, Dick

2016-10-11

Cold-water corals (CWCs) form large mounds on the seafloor that are hotspots of biodiversity in the deep sea, but it remains enigmatic how CWCs can thrive in this food-limited environment. Here, we infer from model simulations that the interaction between tidal currents and CWC-formed mounds induces downwelling events of surface water that brings organic matter to 600-m deep CWCs. This positive feedback between CWC growth on carbonate mounds and enhanced food supply is essential for their sustenance in the deep sea and represents an example of ecosystem engineering of unparalleled magnitude. This 'topographically-enhanced carbon pump' leaks organic matter that settles at greater depths. The ubiquitous presence of biogenic and geological topographies along ocean margins suggests that carbon sequestration through this pump is of global importance. These results indicate that enhanced stratification and lower surface productivity, both expected consequences of climate change, may negatively impact the energy balance of CWCs.

Ecosystem engineering creates a direct nutritional link between 600-m deep cold-water coral mounds and surface productivity

NASA Astrophysics Data System (ADS)

Soetaert, Karline; Mohn, Christian; Rengstorf, Anna; Grehan, Anthony; van Oevelen, Dick

2016-10-01

Cold-water corals (CWCs) form large mounds on the seafloor that are hotspots of biodiversity in the deep sea, but it remains enigmatic how CWCs can thrive in this food-limited environment. Here, we infer from model simulations that the interaction between tidal currents and CWC-formed mounds induces downwelling events of surface water that brings organic matter to 600-m deep CWCs. This positive feedback between CWC growth on carbonate mounds and enhanced food supply is essential for their sustenance in the deep sea and represents an example of ecosystem engineering of unparalleled magnitude. This ’topographically-enhanced carbon pump’ leaks organic matter that settles at greater depths. The ubiquitous presence of biogenic and geological topographies along ocean margins suggests that carbon sequestration through this pump is of global importance. These results indicate that enhanced stratification and lower surface productivity, both expected consequences of climate change, may negatively impact the energy balance of CWCs.

Research and Development of Heavy Wall DNV485FDU Pipeline Plate for 3500M Deep Water Pipe Applications at Shougang

NASA Astrophysics Data System (ADS)

Ding, Wenhua; Li, Shaopo; Li, Jiading; Li, Qun; Chen, Tieqiang; Zhang, Hai

In recent years, there has been development of several significant pipeline projects for the transmission of oil and gas from deep water environments. The production of gas transmission pipelines for application demands heavy wall, high strength, good lower temperature toughness and good weldability. To overcome the difficulty of producing consistent mechanical property in heavy wall pipe Shougang Steel Research in cooperation with the Shougang Steel Qinhuangdao China (Shouqin) 4.3m heavy wide plate mill research was conducted.

De novo transcriptome assembly and positive selection analysis of an individual deep-sea fish.

PubMed

Lan, Yi; Sun, Jin; Xu, Ting; Chen, Chong; Tian, Renmao; Qiu, Jian-Wen; Qian, Pei-Yuan

2018-05-24

High hydrostatic pressure and low temperatures make the deep sea a harsh environment for life forms. Actin organization and microtubules assembly, which are essential for intracellular transport and cell motility, can be disrupted by high hydrostatic pressure. High hydrostatic pressure can also damage DNA. Nucleic acids exposed to low temperatures can form secondary structures that hinder genetic information processing. To study how deep-sea creatures adapt to such a hostile environment, one of the most straightforward ways is to sequence and compare their genes with those of their shallow-water relatives. We captured an individual of the fish species Aldrovandia affinis, which is a typical deep-sea inhabitant, from the Okinawa Trough at a depth of 1550 m using a remotely operated vehicle (ROV). We sequenced its transcriptome and analyzed its molecular adaptation. We obtained 27,633 protein coding sequences using an Illumina platform and compared them with those of several shallow-water fish species. Analysis of 4918 single-copy orthologs identified 138 positively selected genes in A. affinis, including genes involved in microtubule regulation. Particularly, functional domains related to cold shock as well as DNA repair are exposed to positive selection pressure in both deep-sea fish and hadal amphipod. Overall, we have identified a set of positively selected genes related to cytoskeleton structures, DNA repair and genetic information processing, which shed light on molecular adaptation to the deep sea. These results suggest that amino acid substitutions of these positively selected genes may contribute crucially to the adaptation of deep-sea animals. Additionally, we provide a high-quality transcriptome of a deep-sea fish for future deep-sea studies.

40 CFR 147.550 - State-administered program.

Code of Federal Regulations, 2012 CFR

2012-07-01

.... (1) Oil and Gas and Deep Drilling Act of 1975, Official Code of Georgia Annotated (O.C.G.A.) §§ 12-4... 40 Protection of Environment 24 2012-07-01 2012-07-01 false State-administered program. 147.550 Section 147.550 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) WATER PROGRAMS...

40 CFR 147.550 - State-administered program.

Code of Federal Regulations, 2014 CFR

2014-07-01

.... (1) Oil and Gas and Deep Drilling Act of 1975, Official Code of Georgia Annotated (O.C.G.A.) §§ 12-4... 40 Protection of Environment 23 2014-07-01 2014-07-01 false State-administered program. 147.550 Section 147.550 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) WATER PROGRAMS...

40 CFR 147.550 - State-administered program.

Code of Federal Regulations, 2011 CFR

2011-07-01

.... (1) Oil and Gas and Deep Drilling Act of 1975, Official Code of Georgia Annotated (O.C.G.A.) §§ 12-4... 40 Protection of Environment 23 2011-07-01 2011-07-01 false State-administered program. 147.550 Section 147.550 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) WATER PROGRAMS...

Evidence of Late Pliocene-Early Pleistocene marine environments in the deep subsurface of the Lihue Basin, Kauai, Hawaii

USGS Publications Warehouse

Izuka, S.K.; Resig, J.M.

2008-01-01

Cuttings recovered from two deep exploratory wells in the Lihue Basin, Kauai, Hawaii, include fossiliferous marine deposits that offer an uncommon opportunity to study paleoenvironments from the deep subsurface in Hawaii and interpret the paleogeography and geologic history of Kauai. These deposits indicate that two marine incursions gave rise to protected shallow-water, low-energy embayments in the southern part of the Lihue Basin in the late Pliocene-early Pleistocene. During the first marine incursion, the embayment was initially zoned, with a variable-salinity environment nearshore and a normal-marine reef environment offshore. The offshore reef environment eventually evolved to a nearshore, variable-salinity environment as the outer part of the embayment shallowed. During the second marine incursion, the embayment had normal-marine to hypersaline conditions, which constitute a significant departure from the variable-salinity environment present during the first marine incursion. Large streams draining the southern Lihue Basin are a likely source of the freshwater that caused the salinity fluctuations evident in the fossils from the first marine incursion. Subsequent volcanic eruptions produced lava flows that buried the embayment and probably diverted much of the stream flow in the southern Lihue Basin northward, to its present point of discharge north of Kalepa Ridge. As a result, the embayment that formed during the second marine incursion received less freshwater, and a normal-marine to hypersaline environment developed. The shallow-water marine deposits, currently buried between 86 m and 185 m below present sea level, have implications for regional tectonics and global eustasy. Copyright ?? 2008, SEPM (Society for Sedimentary Geology).

Water Recovery with the Heat Melt Compactor in a Microgravity Environment

NASA Technical Reports Server (NTRS)

Golliher, Eric L.; Goo, Jonathan; Fisher, John

2015-01-01

The Heat Melt Compactor is a proposed utility that will compact astronaut trash, extract the water for eventual re-use, and form dry square tiles that can be used as additional ionizing radiation shields for future human deep space missions. The Heat Melt Compactor has been under development by a consortium of NASA centers. The downstream portion of the device is planned to recover a small amount of water while in a microgravity environment. Drop tower low gravity testing was performed to assess the effect of small particles on a capillary-based water/air separation device proposed for the water recovery portion of the Heat Melt Compactor.

Bubble bursting as an aerosol generation mechanism during an oil spill in the deep-sea environment: laboratory experimental demonstration of the transport pathway.

PubMed

Ehrenhauser, Franz S; Avij, Paria; Shu, Xin; Dugas, Victoria; Woodson, Isaiah; Liyana-Arachchi, Thilanga; Zhang, Zenghui; Hung, Francisco R; Valsaraj, Kalliat T

2014-01-01

Oil spills in the deep-sea environment such as the 2010 Deep Water Horizon oil spill in the Gulf of Mexico release vast quantities of crude oil into the sea-surface environment. Various investigators have discussed the marine transport and fate of the oil into different environmental compartments (air, water, sediment, and biota). The transport of the oil into the atmosphere in these previous investigations has been limited to only evaporation, a volatility dependent pathway. In this work, we studied the aerosolization of oil spill matter via bursting bubbles as they occur during whitecaps in a laboratory aerosolization reactor. By evaluating the alkane content in oil mousse, crude oil, the gas phase, and particulate matter we clearly demonstrate that aerosolization via bursting bubbles is a solubility and volatility independent transport pathway for alkanes. The signature of alkane fractions in the native oil and aerosolized matter matched well especially for the less volatile alkanes (C20-C29). Scanning electron microscope interfaced with energy dispersive X-ray images identified the carbon fractions associated with salt particles of aerosols. Theoretical molecular dynamics simulations in the accompanying paper lend support to the observed propensity for alkanes at air-salt water interfaces of breaking bubbles and the produced droplets. The presence of a dispersant in the aqueous phase increased the oil ejection rate at the surface especially for the C20-C29 alkanes. The information presented here emphasizes the need to further study sea-spray aerosols as a possible transport vector for spilled oil in the sea surface environment.

Depleted deep South China Sea δ13C paleoceanographic events in response to tectonic evolution in Taiwan-Luzon Strait since Middle Miocene

NASA Astrophysics Data System (ADS)

Chen, Wen-Huang; Huang, Chi-Yue; Lin, Yen-Jun; Zhao, Quanhong; Yan, Yi; Chen, Duofu; Zhang, Xinchang; Lan, Qing; Yu, Mengming

2015-12-01

The most distinctive feature of the deep South China Sea (SCS) paleoceanography is the occurrence of long-term depleted deep-sea benthic foraminiferal δ13C values. They are lower than the global and the Pacific composite records in the last 16 Ma, especially at 13.2, 10.5, 6.5, 3.0 and 1.2-0.4 Ma. This distinct deep SCS paleoceanograhic history coincides with the subduction-collision history in the Taiwan region where waters of the West Pacific (WP) and the SCS exchange. The depleted deep-sea benthic foraminiferal δ13C events indicate that the SCS deep basin became progressively a stagnant environment in the last 16 Ma due to either closure of the connection with the WP bottom water or temporary reduction of the WP deep water flowing into the deep SCS. Both the Taiwan accretionary prism and the Luzon arc became the main tectono-morphological barriers for the WP bottom water flowing into the SCS deep basin when eastward subduction of the SCS oceanic lithosphere beneath the Philippine Sea Plate started from the Middle Miocene (18-16 Ma). This began a long-term trend of depleted SCS deep-sea benthic δ13C values in the last 16 Ma. The oblique arc-continent collision since ~6.5 Ma uplifted the Taiwan accretionary prism rapidly above sea level and further isolated the SCS from the open Pacific. The collision simultaneously causes backthrusting deformations in the North Luzon Trough forearc basin and sequentially closes interarc water gates between volcanic islands from north to south. The Loho and the Taitung interarc water gates in the advanced collision zone were closed at ~3.0 Ma and ~1.2 Ma, coinciding with the very low SCS deep-sea benthic δ13C events at 3.0 and 1.2-0.4 Ma, respectively. The Taitung Canyon between the Lutao and Lanyu volcanic islands in the incipient collision zone is semi-closed presently. These closure events also lead to the result that the WP deep water intrudes westward into the SCS principally through the Bashi Channel between the Lanyu and Batan volcanic islands in the subduction zone.

[Distribution Characteristics and Source of Fluoride in Groundwater in Lower Plain Area of North China Plain: A Case Study in Nanpi County].

PubMed

Kong, Xiao-le; Wang, Shi-qin; Zhao, Huan; Yuan, Rui-qiang

2015-11-01

There is an obvious regional contradiction between water resources and agricultural produce in lower plain area of North China, however, excessive fluorine in deep groundwater further limits the use of regional water resources. In order to understand the spatial distribution characteristics and source of F(-) in groundwater, study was carried out in Nanpi County by field survey and sampling, hydrogeochemical analysis and stable isotopes methods. The results showed that the center of low fluoride concentrations of shallow groundwater was located around reservoir of Dalang Lake, and centers of high fluoride concentrations were located in southeast and southwest of the study area. The region with high fluoride concentration was consistent with the over-exploitation region of deep groundwater. Point source pollution of subsurface drainage and non-point source of irrigation with deep groundwater in some regions were the main causes for the increasing F(-) concentrations of shallow groundwater in parts of the sampling sites. Rock deposition and hydrogeology conditions were the main causes for the high F(-) concentrations (1.00 mg x L(-1), threshold of drinking water quality standard in China) in deep groundwater. F(-) released from clay minerals into the water increased the F(-) concentrations in deep groundwater because of over-exploitation. With the increasing exploitation and utilization of brackish shallow groundwater and the compressing and restricting of deep groundwater exploitation, the water environment in the middle and east lower plain area of North China will undergo significant change, and it is important to identify the distribution and source of F(-) in surface water and groundwater for reasonable development and use of water resources in future.

Reservoir compartmentalization of deep-water Intra Qua Iboe sand (Pliocene), Edop field, offshore Nigeria

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hermance, W.E.; Olaifa, J.O.; Shanmugam, G.

An integration of 3-D seismic and sedimentological information provides a basis for recognizing and mapping individual flow units within the Intra Qua Iboe (IQI) reservoir (Pliocene), Edop Field, offshore Nigeria. Core examination show the following depositional facies: A-Sandy slump/mass flow, B-Muddy slump/mass flow, C. Bottom current reworking. D-Non-channelized turbidity currents, E. Channelized (coalesced) turbidity currents. F-Channelized (isolated) turbidity currents, G-Pelagic/hemipelagic, H-Levee, I-Reworked slope, J-Wave dominated, and K-Tide dominated facies. With the exception of facies J and K, all these facies are of deep-water affinity. The IQI was deposited on an upper slope environment in close proximity to the shelf edge.more » Through time, as the shelf edge migrated scaward, deposition began with a channel dominated deep-water system (IQI 1 and 2) and progressed through a slump/debris flow dominated deep-water system (IQI 3, the principle reservoir) to a tide and wave dominated shallow-water system (IQI 4). Compositional and textural similarities between the deep-water facies result in similar log motifs. Furthermore, these depositional facies are not readily apparent as distinct seismic facies. Deep-water facies A, D, E, and F are reservoir facies, whereas facies B, C, G, H, and I are non-reservoir facies. However, Facies G is useful as a seismically mappable event throughout the study area. Mapping of these non-reservoir events provides the framework for understanding gross reservoir architecture. This study has resulted in seven defined reservoir units within the IQI, which serves as the architectural framework for ongoing reservoir characterization.« less

Temperature-profile methods for estimating percolation rates in arid environments

USGS Publications Warehouse

Constantz, Jim; Tyler, Scott W.; Kwicklis, Edward

2003-01-01

Percolation rates are estimated using vertical temperature profiles from sequentially deeper vadose environments, progressing from sediments beneath stream channels, to expansive basin-fill materials, and finally to deep fractured bedrock underlying mountainous terrain. Beneath stream channels, vertical temperature profiles vary over time in response to downward heat transport, which is generally controlled by conductive heat transport during dry periods, or by advective transport during channel infiltration. During periods of stream-channel infiltration, two relatively simple approaches are possible: a heat-pulse technique, or a heat and liquid-water transport simulation code. Focused percolation rates beneath stream channels are examined for perennial, seasonal, and ephemeral channels in central New Mexico, with estimated percolation rates ranging from 100 to 2100 mm d−1 Deep within basin-fill and underlying mountainous terrain, vertical temperature gradients are dominated by the local geothermal gradient, which creates a profile with decreasing temperatures toward the surface. If simplifying assumptions are employed regarding stratigraphy and vapor fluxes, an analytical solution to the heat transport problem can be used to generate temperature profiles at specified percolation rates for comparison to the observed geothermal gradient. Comparisons to an observed temperature profile in the basin-fill sediments beneath Frenchman Flat, Nevada, yielded water fluxes near zero, with absolute values <10 mm yr−1 For the deep vadose environment beneath Yucca Mountain, Nevada, the complexities of stratigraphy and vapor movement are incorporated into a more elaborate heat and water transport model to compare simulated and observed temperature profiles for a pair of deep boreholes. Best matches resulted in a percolation rate near zero for one borehole and 11 mm yr−1 for the second borehole.

Design of a Water Environment Monitoring System Based on Wireless Sensor Networks

PubMed Central

Jiang, Peng; Xia, Hongbo; He, Zhiye; Wang, Zheming

2009-01-01

A water environmental monitoring system based on a wireless sensor network is proposed. It consists of three parts: data monitoring nodes, data base station and remote monitoring center. This system is suitable for the complex and large-scale water environment monitoring, such as for reservoirs, lakes, rivers, swamps, and shallow or deep groundwaters. This paper is devoted to the explanation and illustration for our new water environment monitoring system design. The system had successfully accomplished the online auto-monitoring of the water temperature and pH value environment of an artificial lake. The system's measurement capacity ranges from 0 to 80 °C for water temperature, with an accuracy of ±0.5 °C; from 0 to 14 on pH value, with an accuracy of ±0.05 pH units. Sensors applicable to different water quality scenarios should be installed at the nodes to meet the monitoring demands for a variety of water environments and to obtain different parameters. The monitoring system thus promises broad applicability prospects. PMID:22454592

Adaptation to the deep-sea hydrothermal vents and cold seeps: Insights from the transcriptomes of Alvinocaris longirostris in both environments

NASA Astrophysics Data System (ADS)

Hui, Min; Cheng, Jiao; Sha, Zhongli

2018-05-01

Alvinocaris longirostris Kikuchi and Ohta, 1995 is one of the few species co-distributed in deep-sea hydrothermal vent and cold seep environments. We performed the transcriptome analysis for A. longirostris and identified differentially expressed genes (DEGs) between samples from the Iheya North hydrothermal vent (HV) and a methane seep in the South China Sea (MS). From the 57,801 annotated unigenes, multi-copies of enzyme family members for eliminating toxic xenobiotics were isolated and seven putatively duplicated gene clusters of cytochrome P450s were discovered, which may contribute to adaptation to the harsh conditions. Eight single amino acid substitutions of a Rhodopsin gene with low expression in two deep-sea alvinocaridid species were positively selected when compared with shallow water shrimps, which may be the result of adaptation to the dim-light environment in deep sea. 408 DEGs were identified with 53 and 355 up-regulated in HV and MS, respectively. Various genes associated with sulfur metabolism, detoxification and mitochondria were included, revealing different mechanisms of adaptation to the two types of extreme environments. All results are expected to serve as important basis for the further study.

Deep aquifer as driver for mineral authigenesis in Gulf of Alaska sediments (IODP Expedition 341, Site U1417)

NASA Astrophysics Data System (ADS)

Zindorf, Mark; März, Christian; Wagner, Thomas; Strauss, Harald; Gulick, Sean P. S.; Jaeger, John M.; LeVay, Leah J.

2016-04-01

Bacterial sulphate reduction plays a key role in authigenic mineral formation in marine sediments. Usually, decomposition of organic matter follows a sequence of microbial metabolic pathways, where microbial sulphate reduction leads to sulphate depletion deeper in the sediment. When sulphate is consumed completely from the pore waters, methanogenesis commences. The contact of sulphate- and methane-containing pore waters is a well-defined biogeochemical boundary (the sulphate-methane transition zone, SMTZ). Here authigenic pyrite, barite and carbonates form. Pyrite formation is directly driven by bacterial sulphate reduction since pyrite precipitates from produced hydrogen sulphide. Barite and carbonate formation are secondary effects resulting from changes of the chemical milieu due to microbial activity. However, this mineral authigenesis is ultimately linked to abiotic processes that determine the living conditions for microorganisms. At IODP Site U1417 in the Gulf of Alaska, a remarkable diagenetic pattern has been observed: Between sulphate depletion and methane enrichment, a ~250 m wide gap exists. Consequently, no SMTZ can be found under present conditions, but enrichments of pyrite indicate that such zones have existed in the past. Solid layers consisting of authigenic carbonate-cemented sand were partly recovered right above the methane production zone, likely preventing continued upward methane diffusion. At the bottom of the sediment succession, the lower boundary of the methanogenic zone is constrained by sulphate-rich pore waters that appear to originate from a deeper source. Here, a well-established SMTZ exists, but in reversed order (sulphate diffusing up, methane diffusing down). Sulphur isotopes of pyrite reveal that sulphate reduction here does not occur under closed system conditions. This indicates that a deep aquifer is actively recharging the deep sulphate pool. Similar deep SMTZs have been found at other sites, yet mostly in geologically active environments such as ridge flanks or above subduction zones. Therefore Site U1417, in a relatively inactive intraplate environment, represents a so far under-sampled geochemical setting. Calculated accumulation times for authigenic minerals in the deep SMTZ are on the same order of magnitude as the onset of subduction-related bending of the Pacific Plate, suggesting that both processes are linked. Plate bending could create fractures in the overlying sediments allowing seawater to penetrate and recharge a deep aquifer. Our study provides insights into a newly discovered geological process suitable for delivering sulphate-rich water deep into the sediments and installing diagenetically active environments where microbial activity would otherwise be very limited.

Groundwater mixing at fracture intersections triggers massive iron-rich microbial mats

NASA Astrophysics Data System (ADS)

Bochet, O.; Le Borgne, T.; Bethencourt, L.; Aquilina, L.; Dufresne, A.; Pédrot, M.; Farasin, J.; Abbott, B. W.; Labasque, T.; Chatton, E.; Lavenant, N.; Petton, C.

2017-12-01

While most freshwater on Earth resides and flows in groundwater systems, these deep subsurface environments are often assumed to have little biogeochemical activity compared to surface environments. Here we report a massive microbial mat of iron-oxidizing bacteria, flourishing 60 meters below the surface, far below the mixing zone where most microbial activity is believed to occur. The abundance of microtubular structures in the mat hinted at the prevalence of of Leptothrix ochracea, but metagenomic analysis revealed a diverse consortium of iron-oxidizing bacteria dominated by unknown members of the Gallionellaceae family. This deep biogeochemical hot spot formed at the intersection of bedrock fractures, which maintain redox gradients by mixing water with different residence times and chemical compositions. Using measured fracture properties and hydrological conditions we developed a quantitative model to simulate the reactive zone where such deep hot spots could occur. While seasonal fluctuations are generally thought to decrease with depth, we found that meter-scale changes in water table level moved the depth of the reactive zone hundreds of meters because the microaerophilic threshold for ironoxidizers is highly sensitive to changes in mixing rates at fracture intersections. These results demonstrate that dynamic microbial communities can be sustained deep below the surface in bedrock fractures. Given the ubiquity of fractures at multiple scales in Earth's subsurface, such deep hot spots may strongly influence global biogeochemical cycles.

Molecular Phylogenetic Analysis of Archaeal Intron-Containing Genes Coding for rRNA Obtained from a Deep-Subsurface Geothermal Water Pool

PubMed Central

Takai, Ken; Horikoshi, Koki

1999-01-01

Molecular phylogenetic analysis of a naturally occurring microbial community in a deep-subsurface geothermal environment indicated that the phylogenetic diversity of the microbial population in the environment was extremely limited and that only hyperthermophilic archaeal members closely related to Pyrobaculum were present. All archaeal ribosomal DNA sequences contained intron-like sequences, some of which had open reading frames with repeated homing-endonuclease motifs. The sequence similarity analysis and the phylogenetic analysis of these homing endonucleases suggested the possible phylogenetic relationship among archaeal rRNA-encoded homing endonucleases. PMID:10584021

Ancient origin of the modern deep-sea fauna.

PubMed

Thuy, Ben; Gale, Andy S; Kroh, Andreas; Kucera, Michal; Numberger-Thuy, Lea D; Reich, Mike; Stöhr, Sabine

2012-01-01

The origin and possible antiquity of the spectacularly diverse modern deep-sea fauna has been debated since the beginning of deep-sea research in the mid-nineteenth century. Recent hypotheses, based on biogeographic patterns and molecular clock estimates, support a latest Mesozoic or early Cenozoic date for the origin of key groups of the present deep-sea fauna (echinoids, octopods). This relatively young age is consistent with hypotheses that argue for extensive extinction during Jurassic and Cretaceous Oceanic Anoxic Events (OAEs) and the mid-Cenozoic cooling of deep-water masses, implying repeated re-colonization by immigration of taxa from shallow-water habitats. Here we report on a well-preserved echinoderm assemblage from deep-sea (1000-1500 m paleodepth) sediments of the NE-Atlantic of Early Cretaceous age (114 Ma). The assemblage is strikingly similar to that of extant bathyal echinoderm communities in composition, including families and genera found exclusively in modern deep-sea habitats. A number of taxa found in the assemblage have no fossil record at shelf depths postdating the assemblage, which precludes the possibility of deep-sea recolonization from shallow habitats following episodic extinction at least for those groups. Our discovery provides the first key fossil evidence that a significant part of the modern deep-sea fauna is considerably older than previously assumed. As a consequence, most major paleoceanographic events had far less impact on the diversity of deep-sea faunas than has been implied. It also suggests that deep-sea biota are more resilient to extinction events than shallow-water forms, and that the unusual deep-sea environment, indeed, provides evolutionary stability which is very rarely punctuated on macroevolutionary time scales.

From top to bottom: Do Lake Trout diversify along a depth gradient in Great Bear Lake, NT, Canada?

USGS Publications Warehouse

Chavarie, Louise; Howland, Kimberly L.; Harris, Les N.; Hansen, Michael J.; Harford, William J.; Gallagher, Colin P.; Baillie, Shauna M.; Malley, Brendan; Tonn, William M.; Muir, Andrew M.; Krueger, Charles C.

2018-01-01

Depth is usually considered the main driver of Lake Trout intraspecific diversity across lakes in North America. Given that Great Bear Lake is one of the largest and deepest freshwater systems in North America, we predicted that Lake Trout intraspecific diversity to be organized along a depth axis within this system. Thus, we investigated whether a deep-water morph of Lake Trout co-existed with four shallow-water morphs previously described in Great Bear Lake. Morphology, neutral genetic variation, isotopic niches, and life-history traits of Lake Trout across depths (0–150 m) were compared among morphs. Due to the propensity of Lake Trout with high levels of morphological diversity to occupy multiple habitat niches, a novel multivariate grouping method using a suite of composite variables was applied in addition to two other commonly used grouping methods to classify individuals. Depth alone did not explain Lake Trout diversity in Great Bear Lake; a distinct fifth deep-water morph was not found. Rather, Lake Trout diversity followed an ecological continuum, with some evidence for adaptation to local conditions in deep-water habitat. Overall, trout caught from deep-water showed low levels of genetic and phenotypic differentiation from shallow-water trout, and displayed higher lipid content (C:N ratio) and occupied a higher trophic level that suggested an potential increase of piscivory (including cannibalism) than the previously described four morphs. Why phenotypic divergence between shallow- and deep-water Lake Trout was low is unknown, especially when the potential for phenotypic variation should be high in deep and large Great Bear Lake. Given that variation in complexity of freshwater environments has dramatic consequences for divergence, variation in the complexity in Great Bear Lake (i.e., shallow being more complex than deep), may explain the observed dichotomy in the expression of intraspecific phenotypic diversity between shallow- vs. deep-water habitats. The ambiguity surrounding mechanisms driving divergence of Lake Trout in Great Bear Lake should be seen as reflective of the highly variable nature of ecological opportunity and divergent natural selection itself.

From top to bottom: Do Lake Trout diversify along a depth gradient in Great Bear Lake, NT, Canada?

PubMed

Chavarie, Louise; Howland, Kimberly L; Harris, Les N; Hansen, Michael J; Harford, William J; Gallagher, Colin P; Baillie, Shauna M; Malley, Brendan; Tonn, William M; Muir, Andrew M; Krueger, Charles C

2018-01-01

Depth is usually considered the main driver of Lake Trout intraspecific diversity across lakes in North America. Given that Great Bear Lake is one of the largest and deepest freshwater systems in North America, we predicted that Lake Trout intraspecific diversity to be organized along a depth axis within this system. Thus, we investigated whether a deep-water morph of Lake Trout co-existed with four shallow-water morphs previously described in Great Bear Lake. Morphology, neutral genetic variation, isotopic niches, and life-history traits of Lake Trout across depths (0-150 m) were compared among morphs. Due to the propensity of Lake Trout with high levels of morphological diversity to occupy multiple habitat niches, a novel multivariate grouping method using a suite of composite variables was applied in addition to two other commonly used grouping methods to classify individuals. Depth alone did not explain Lake Trout diversity in Great Bear Lake; a distinct fifth deep-water morph was not found. Rather, Lake Trout diversity followed an ecological continuum, with some evidence for adaptation to local conditions in deep-water habitat. Overall, trout caught from deep-water showed low levels of genetic and phenotypic differentiation from shallow-water trout, and displayed higher lipid content (C:N ratio) and occupied a higher trophic level that suggested an potential increase of piscivory (including cannibalism) than the previously described four morphs. Why phenotypic divergence between shallow- and deep-water Lake Trout was low is unknown, especially when the potential for phenotypic variation should be high in deep and large Great Bear Lake. Given that variation in complexity of freshwater environments has dramatic consequences for divergence, variation in the complexity in Great Bear Lake (i.e., shallow being more complex than deep), may explain the observed dichotomy in the expression of intraspecific phenotypic diversity between shallow- vs. deep-water habitats. The ambiguity surrounding mechanisms driving divergence of Lake Trout in Great Bear Lake should be seen as reflective of the highly variable nature of ecological opportunity and divergent natural selection itself.

From top to bottom: Do Lake Trout diversify along a depth gradient in Great Bear Lake, NT, Canada?

PubMed Central

Howland, Kimberly L.; Harris, Les N.; Hansen, Michael J.; Harford, William J.; Gallagher, Colin P.; Baillie, Shauna M.; Malley, Brendan; Tonn, William M.; Muir, Andrew M.; Krueger, Charles C.

2018-01-01

Depth is usually considered the main driver of Lake Trout intraspecific diversity across lakes in North America. Given that Great Bear Lake is one of the largest and deepest freshwater systems in North America, we predicted that Lake Trout intraspecific diversity to be organized along a depth axis within this system. Thus, we investigated whether a deep-water morph of Lake Trout co-existed with four shallow-water morphs previously described in Great Bear Lake. Morphology, neutral genetic variation, isotopic niches, and life-history traits of Lake Trout across depths (0–150 m) were compared among morphs. Due to the propensity of Lake Trout with high levels of morphological diversity to occupy multiple habitat niches, a novel multivariate grouping method using a suite of composite variables was applied in addition to two other commonly used grouping methods to classify individuals. Depth alone did not explain Lake Trout diversity in Great Bear Lake; a distinct fifth deep-water morph was not found. Rather, Lake Trout diversity followed an ecological continuum, with some evidence for adaptation to local conditions in deep-water habitat. Overall, trout caught from deep-water showed low levels of genetic and phenotypic differentiation from shallow-water trout, and displayed higher lipid content (C:N ratio) and occupied a higher trophic level that suggested an potential increase of piscivory (including cannibalism) than the previously described four morphs. Why phenotypic divergence between shallow- and deep-water Lake Trout was low is unknown, especially when the potential for phenotypic variation should be high in deep and large Great Bear Lake. Given that variation in complexity of freshwater environments has dramatic consequences for divergence, variation in the complexity in Great Bear Lake (i.e., shallow being more complex than deep), may explain the observed dichotomy in the expression of intraspecific phenotypic diversity between shallow- vs. deep-water habitats. The ambiguity surrounding mechanisms driving divergence of Lake Trout in Great Bear Lake should be seen as reflective of the highly variable nature of ecological opportunity and divergent natural selection itself. PMID:29566015

Deep-sea diversity patterns are shaped by energy availability.

PubMed

Woolley, Skipton N C; Tittensor, Derek P; Dunstan, Piers K; Guillera-Arroita, Gurutzeta; Lahoz-Monfort, José J; Wintle, Brendan A; Worm, Boris; O'Hara, Timothy D

2016-05-19

The deep ocean is the largest and least-explored ecosystem on Earth, and a uniquely energy-poor environment. The distribution, drivers and origins of deep-sea biodiversity remain unknown at global scales. Here we analyse a database of more than 165,000 distribution records of Ophiuroidea (brittle stars), a dominant component of sea-floor fauna, and find patterns of biodiversity unlike known terrestrial or coastal marine realms. Both patterns and environmental predictors of deep-sea (2,000-6,500 m) species richness fundamentally differ from those found in coastal (0-20 m), continental shelf (20-200 m), and upper-slope (200-2,000 m) waters. Continental shelf to upper-slope richness consistently peaks in tropical Indo-west Pacific and Caribbean (0-30°) latitudes, and is well explained by variations in water temperature. In contrast, deep-sea species show maximum richness at higher latitudes (30-50°), concentrated in areas of high carbon export flux and regions close to continental margins. We reconcile this structuring of oceanic biodiversity using a species-energy framework, with kinetic energy predicting shallow-water richness, while chemical energy (export productivity) and proximity to slope habitats drive deep-sea diversity. Our findings provide a global baseline for conservation efforts across the sea floor, and demonstrate that deep-sea ecosystems show a biodiversity pattern consistent with ecological theory, despite being different from other planetary-scale habitats.

Litho- and biofacies of Early Cretaceous rudist-bearing carbonate sediments in northeastern Japan

NASA Astrophysics Data System (ADS)

Sano, Shin-ichi

1995-11-01

Carbonate blocks of late Aptian (Lower Cretaceous) age occur in the Lower Yezo Group of central Hokkaido in northeast Japan. The shallow-water carbonates were emplaced by gravity sliding and rock fall into a deep-water flysch basin. Various lithofacies can be distinguished within the blocks including massive wackestone, bedded packstone and micro-oncoid grainstone, containing corals, rudists, an oyster, gastropods, calcareous algae and an orbitolinid foraminifer. Facies and palaeoecological analyses suggest deposition of low-energy biostromes and sand banks in open lagoonal and restricted environments with local higher-energy shoals and beaches. The presence of calcareous sandstones and abundant insoluble residues in limestones suggest deposition in an attached carbonate platform close to a supply of terrigenous material, rather than deposition upon seamounts within an oceanic setting. A narrow rimmed shelf in tropical-subtropical conditions would have been the depositional environment for these carbonates, which were subsequently deformed into blocks and transported into deep water as a result of the tectonic collapse of the platform.

N2 production and fixation in deep-tier burrows of Squilla empusa in muddy sediments of Great Peconic Bay

NASA Astrophysics Data System (ADS)

Waugh, Stuart; Aller, Robert C.

2017-11-01

Global marine N budgets often show deficits due to dominance of benthic N2 production relative to pelagic N2 fixation. Recent studies have argued that benthic N2 fixation in shallow water environments has been underestimated. In particular, N2 fixation associated with animal burrows may be significant as indicated by high rates of N2 fixation reported in muddy sands populated by the ghost shrimp, Neotrypaea californiensis (Bertics et al., 2010). We investigated whether N2 fixation occurs at higher rates in the burrow-walls of the deep-burrowing ( 0.5-4 m) mantis shrimp, Squilla empusa, compared to ambient, estuarine muds and measured seasonal in-situ N2 concentrations in burrow-water relative to bottom-water. Acetylene reduction assays showed lower N2 fixation in burrow-walls than in un-populated sediments, likely due to inhibitory effects of O2 on ethylene production. Dissolved N2 was higher in burrow-water than proximate bottom-water at all seasons, demonstrating a consistent balance of net N2 production relative to fixation in deep-tier biogenic structures.

Ground-water levels and direction of ground-water flow in the central part of Bernalillo County, New Mexico, summer 1983

USGS Publications Warehouse

Kues, Georginna E.

1986-01-01

In 1980, toxic chemicals were detected in water samples from wells in and near Albuquerque 's San Jose well field. At the request of the Environmental Improvement Division of the New Mexico Health and Environment Department, the U.S. Geological Survey conducted a study to determine groundwater levels and flow direction. Water levels were measured in 44 wells in a 64 sq mi area along the Rio Grande and adjacent areas during a period of near maximum municipal pumpage. Based on the altitude of screened interval, wells were grouped into shallow (screened internal above an altitude of 4,800 ft) or deep (screened internal below an altitude of 4,800 ft) zones. Groundwater in the shallow zone generally moves from north to south parallel to flow in the Rio Grande. Groundwater in the deep zone generally moves from the northwest to the east and southeast. A poorly developed cone of depression within the deep zone was present in the northeast. Water levels in wells were as much as 18 feet higher in the shallow zone than in the deep zone in the vicinity of the San Jose well field, indicating a downward gradient. (Author 's abstract)

Sustainable development of deep-water seaport: the case of Lithuania.

PubMed

Burskyte, Vilma; Belous, Olga; Stasiskiene, Zaneta

2011-06-01

In 2003, the Japan International Cooperation Agency carried out a development feasibility study of Klaipeda Seaport (Lithuania). The focus in this study was the evaluation of environmental impacts of the port expansion because it is located in an ecologically sensitive area. While the Japanese researchers focused on the environmental impact analysis, they did not provide unambiguous conclusions. The problems remained unresolved and required further, more detailed consideration and deeper analysis. Environmental sustainability in seaports is an issue of timely importance in many countries given the rapid increase in port-to-port traffic and harbor capacity. This paper explores the situation in Klaipeda Seaport (Lithuania) which is the northernmost ice-free port on the Eastern coast of the Baltic Sea and its challenges in terms of environmental aspects and current pollution situation. This port plays an important role in the economic development of the region and in creating a sustainable society, i.e., a society that continues to develop economically without increasing its impact on our living environment and where the possible reduction of its current impact can be huge due to the fact that the seaport is a place where transport and logistics intersect and constitute large-scale industrial estates. Increasingly, they also turn towards sustainability. Society faces the need for radical change because of increasing technological progress and increasing environmental impact. Environmental and public issues must be addressed by a systemic approach to find harmony among all the subsystems. Therefore, the authors of the article performed an assessment of the deep-water port of Klaipeda sustainable development opportunities tackling the following tasks: (1) Assessing Klaipeda port and the projected deep-water port of the current environment state; (2) Assessing the impact of the water quality of Klaipeda port, depending on the intensity of activity; (3) Assessing the projected impact of the deep-water port on the environment. The results of the performed research allowed: (a) to reveal strengths and weaknesses of Klaipeda port development and the potential conflicts of interest among different stakeholders, (b) to identify the set of problem solutions seeking sustainable Klaipeda port development; (c) to develop the set of sustainability indicators to monitor the efficiency of the development.

Potential impact of global climate change on benthic deep-sea microbes.

PubMed

Danovaro, Roberto; Corinaldesi, Cinzia; Dell'Anno, Antonio; Rastelli, Eugenio

2017-12-15

Benthic deep-sea environments are the largest ecosystem on Earth, covering ∼65% of the Earth surface. Microbes inhabiting this huge biome at all water depths represent the most abundant biological components and a relevant portion of the biomass of the biosphere, and play a crucial role in global biogeochemical cycles. Increasing evidence suggests that global climate changes are affecting also deep-sea ecosystems, both directly (causing shifts in bottom-water temperature, oxygen concentration and pH) and indirectly (through changes in surface oceans' productivity and in the consequent export of organic matter to the seafloor). However, the responses of the benthic deep-sea biota to such shifts remain largely unknown. This applies particularly to deep-sea microbes, which include bacteria, archaea, microeukaryotes and their viruses. Understanding the potential impacts of global change on the benthic deep-sea microbial assemblages and the consequences on the functioning of the ocean interior is a priority to better forecast the potential consequences at global scale. Here we explore the potential changes in the benthic deep-sea microbiology expected in the coming decades using case studies on specific systems used as test models. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Deep-water Circulation: Processes & Products (16-18 June 2010, Baiona): introduction and future challenges

NASA Astrophysics Data System (ADS)

Hernández-Molina, Francisco Javier; Stow, Dorrik A. V.; Llave, Estefanía; Rebesco, Michele; Ercilla, Gemma; van Rooij, David; Mena, Anxo; Vázquez, Juan-Tomás; Voelker, Antje H. L.

2011-12-01

Deep-water circulation is a critical part of the global conveyor belt that regulates Earth's climate. The bottom (contour)-current component of this circulation is of key significance in shaping the deep seafloor through erosion, transport, and deposition. As a result, there exists a high variety of large-scale erosional and depositional features (drifts) that together form more complex contourite depositional systems on continental slopes and rises as well as in ocean basins, generated by different water masses flowing at different depths and at different speeds either in the same or in opposite directions. Yet, the nature of these deep-water processes and the deposited contourites is still poorly understood in detail. Their ultimate decoding will undoubtedly yield information of fundamental importance to the earth and ocean sciences. The international congress Deep-water Circulation: Processes & Products was held from 16-18 June 2010 in Baiona, Spain, hosted by the University of Vigo. Volume 31(5/6) of Geo-Marine Letters is a special double issue containing 17 selected contributions from the congress, guest edited by F.J. Hernández-Molina, D.A.V. Stow, E. Llave, M. Rebesco, G. Ercilla, D. Van Rooij, A. Mena, J.-T. Vázquez and A.H.L. Voelker. The papers and discussions at the congress and the articles in this special issue provide a truly multidisciplinary perspective of interest to both academic and industrial participants, contributing to the advancement of knowledge on deep-water bottom circulation and related processes, as well as contourite sedimentation. The multidisciplinary contributions (including geomorphology, tectonics, stratigraphy, sedimentology, paleoceanography, physical oceanography, and deep-water ecology) have demonstrated that advances in paleoceanographic reconstructions and our understanding of the ocean's role in the global climate system depend largely on the feedbacks among disciplines. New insights into the link between the biota of deep-water ecosystems and bottom currents confirm the need for this field to be investigated and mapped in detail. Likewise, it is confirmed that deep-water contourites are not only of academic interest but also potential resources of economic value. Cumulatively, both the congress and the present volume serve to demonstrate that the role of bottom currents in shaping the seafloor has to date been generally underestimated, and that our understanding of such systems is still in its infancy. Future research on contourites, using new and more advanced techniques, should focus on a more detailed visualization of water-mass circulation and its variability, in order to decipher the physical processes involved and the associations between drifts and other common bedforms. Moreover, contourite facies models should be better established, including their associations with other deep-water sedimentary environments both in modern and ancient submarine domains. The rapid increase in deep-water exploration and the new deep-water technologies available to the oil industry and academic institutions will undoubtedly lead to spectacular advances in contourite research in terms of processes, morphology, sediment stacking patterns, facies, and their relationships with other deep-marine depositional systems.

Properties of Polyvinylpyrrolidone in a Deep Eutectic Solvent

DOE PAGES

Sapir, Liel; Stanley, Christopher B.; Harries, Daniel

2016-03-10

Deep eutectic solvents (DES) are mixtures of two or more components with high melting temperatures, which form a liquid at room temperature. These DES hold great promise as green solvents for chemical processes, as they are inexpensive and environmentally friendly. Specifically, they present a unique solvating environment to polymers that is different from water. In this paper, we use small angle neutron scattering to study the polymer properties of the common, water-soluble, polyvinylpyrrolidone (PVP) in the prominent DES formed by a 1:2 molar mixture of choline chloride and urea. We find that the polymer adopts a slightly different structure inmore » DES than in water, so that at higher concentrations the polymer favors a more expanded conformation compared to the same concentration in water. Yet, the osmotic pressure of PVP solutions in DES is very similar to that in water, indicating that both solvents are of comparable quality and that the DES components interact favorably with PVP. Finally, the osmotic pressure measurements within this novel class of promising solvents should be of value toward future technological applications as well as for osmotic stress experiments in nonaqueous environments.« less

Properties of Polyvinylpyrrolidone in a Deep Eutectic Solvent

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sapir, Liel; Stanley, Christopher B.; Harries, Daniel

Deep eutectic solvents (DES) are mixtures of two or more components with high melting temperatures, which form a liquid at room temperature. These DES hold great promise as green solvents for chemical processes, as they are inexpensive and environmentally friendly. Specifically, they present a unique solvating environment to polymers that is different from water. In this paper, we use small angle neutron scattering to study the polymer properties of the common, water-soluble, polyvinylpyrrolidone (PVP) in the prominent DES formed by a 1:2 molar mixture of choline chloride and urea. We find that the polymer adopts a slightly different structure inmore » DES than in water, so that at higher concentrations the polymer favors a more expanded conformation compared to the same concentration in water. Yet, the osmotic pressure of PVP solutions in DES is very similar to that in water, indicating that both solvents are of comparable quality and that the DES components interact favorably with PVP. Finally, the osmotic pressure measurements within this novel class of promising solvents should be of value toward future technological applications as well as for osmotic stress experiments in nonaqueous environments.« less

The diversity of PAH-degrading bacteria in a deep-sea water column above the Southwest Indian Ridge.

PubMed

Yuan, Jun; Lai, Qiliang; Sun, Fengqin; Zheng, Tianling; Shao, Zongze

2015-01-01

The bacteria involved in organic pollutant degradation in pelagic deep-sea environments are largely unknown. In this report, the diversity of polycyclic aromatic hydrocarbon (PAH)-degrading bacteria was analyzed in deep-sea water on the Southwest Indian Ridge (SWIR). After enrichment with a PAH mixture (phenanthrene, anthracene, fluoranthene, and pyrene), nine bacterial consortia were obtained from depths of 3946-4746 m. While the consortia degraded all four PAHs when supplied in a mixture, when PAHs were tested individually, only phenanthrene supported growth. Thus, degradation of the PAH mixture reflected a cometabolism of anthracene, fluoranthene, and pyrene with phenanthrene. Further, both culture-dependent and independent methods revealed many new bacteria involved in PAH degradation. Specifically, the alpha and gamma subclasses of Proteobacteria were confirmed as the major groups within the communities. Additionally, Actinobacteria, the CFB group and Firmicutes were detected. Denaturing Gradient Gel Electrophoresis (DGGE) analysis showed that bacteria closely affiliated with Alcanivorax, Novosphingobium, and Rhodovulum occurred most frequently in different PAH-degrading consortia. By using general heterotrophic media, 51 bacteria were isolated from the consortia and of these 34 grew with the PAH mixture as a sole carbon source. Of these, isolates most closely related to Alterierythrobacter, Citricella, Erythrobacter, Idiomarina, Lutibacterium, Maricaulis, Marinobacter, Martelella, Pseudidiomarina, Rhodobacter, Roseovarius, Salipiger, Sphingopyxis, and Stappia were found to be PAH degraders. To the best of our knowledge, this is the first time these bacteria have been identified in this context. In summary, this report revealed significant diversity among the PAH-degrading bacteria in the deep-sea water column. These bacteria may play a role in PAH removal in deep-sea environments.

The diversity of PAH-degrading bacteria in a deep-sea water column above the Southwest Indian Ridge

PubMed Central

Yuan, Jun; Lai, Qiliang; Sun, Fengqin; Zheng, Tianling; Shao, Zongze

2015-01-01

The bacteria involved in organic pollutant degradation in pelagic deep-sea environments are largely unknown. In this report, the diversity of polycyclic aromatic hydrocarbon (PAH)-degrading bacteria was analyzed in deep-sea water on the Southwest Indian Ridge (SWIR). After enrichment with a PAH mixture (phenanthrene, anthracene, fluoranthene, and pyrene), nine bacterial consortia were obtained from depths of 3946–4746 m. While the consortia degraded all four PAHs when supplied in a mixture, when PAHs were tested individually, only phenanthrene supported growth. Thus, degradation of the PAH mixture reflected a cometabolism of anthracene, fluoranthene, and pyrene with phenanthrene. Further, both culture-dependent and independent methods revealed many new bacteria involved in PAH degradation. Specifically, the alpha and gamma subclasses of Proteobacteria were confirmed as the major groups within the communities. Additionally, Actinobacteria, the CFB group and Firmicutes were detected. Denaturing Gradient Gel Electrophoresis (DGGE) analysis showed that bacteria closely affiliated with Alcanivorax, Novosphingobium, and Rhodovulum occurred most frequently in different PAH-degrading consortia. By using general heterotrophic media, 51 bacteria were isolated from the consortia and of these 34 grew with the PAH mixture as a sole carbon source. Of these, isolates most closely related to Alterierythrobacter, Citricella, Erythrobacter, Idiomarina, Lutibacterium, Maricaulis, Marinobacter, Martelella, Pseudidiomarina, Rhodobacter, Roseovarius, Salipiger, Sphingopyxis, and Stappia were found to be PAH degraders. To the best of our knowledge, this is the first time these bacteria have been identified in this context. In summary, this report revealed significant diversity among the PAH-degrading bacteria in the deep-sea water column. These bacteria may play a role in PAH removal in deep-sea environments. PMID:26379634

Dissolved Organophosphate Esters and Polybrominated Diphenyl Ethers in Remote Marine Environments: Arctic Surface Water Distributions and Net Transport through Fram Strait.

PubMed

McDonough, Carrie A; De Silva, Amila O; Sun, Caoxin; Cabrerizo, Ana; Adelman, David; Soltwedel, Thomas; Bauerfeind, Eduard; Muir, Derek C G; Lohmann, Rainer

2018-06-05

Organophosphate esters (OPEs) have been found in remote environments at unexpectedly high concentrations, but very few measurements of OPE concentrations in seawater are available, and none are available in subsurface seawater. In this study, passive polyethylene samplers (PEs) deployed on deep-water moorings in the Fram Strait and in surface waters of Canadian Arctic lakes and coastal sites were analyzed for a suite of common OPEs. Total OPEs ( ∑ 11 OPE) at deep-water sites were dominated by chlorinated OPEs, and ranged from 6.3 to 440 pg/L. Concentrations were similar in eastern and western Fram Strait. Chlorinated OPEs were also dominant in Canadian Arctic surface waters (mean concentration ranged from < DL to 4400 pg/L), while nonhalogenated alkyl/aryl-substituted OPEs remained low (1.3-55 pg/L), possibly due to the greater long-range transport potential of chlorinated OPEs. Polybrominated diphenyl ethers (PBDEs) were found at much lower concentrations than OPEs (

Characterizations of geothermal springs along the Moxi deep fault in the western Sichuan plateau, China

NASA Astrophysics Data System (ADS)

Qi, Jihong; Xu, Mo; An, Chengjiao; Wu, Mingliang; Zhang, Yunhui; Li, Xiao; Zhang, Qiang; Lu, Guoping

2017-02-01

Abundant geothermal springs occur along the Moxi fault located in western Sichuan Province (the eastern edge of the Qinghai-Tibet plateau), highlighted by geothermal water outflow with an unusually high temperature of 218 °C at 21.5 MPa from a 2010-m borehole in Laoyulin, Kangding. Earthquake activity occurs relatively more frequently in the region and is considered to be related to the strong hydrothermal activity. Geothermal waters hosted by a deep fault may provide evidence regarding the deep underground; their aqueous chemistry and isotopic information can indicate the mechanism of thermal springs. Cyclical variations of geothermal water outflows are thought to work under the effect of solid earth tides and can contribute to understanding conditions and processes in underground geo-environments. This paper studies the origin and variations of the geothermal spring group controlled by the Moxi fault and discusses conditions in the deep ground. Flow variation monitoring of a series of parameters was performed to study the geothermal responses to solid tides. Geothermal reservoir temperatures are evaluated with Na-K-Mg data. The abundant sulfite content, dissolved oxygen (DO) and oxidation-reduction potential (ORP) data are discussed to study the oxidation-reduction states. Strontium isotopes are used to trace the water source. The results demonstrate that geothermal water could flow quickly through the Moxi fault the depth of the geothermal reservoir influences the thermal reservoir temperature, where supercritical hot water is mixed with circulating groundwater and can reach 380 °C. To the southward along the fault, the circulation of geothermal waters becomes shallower, and the waters may have reacted with metamorphic rock to some extent. Our results provide a conceptual deep heat source model for geothermal flow and the reservoir characteristics of the Moxi fault and indicate that the faulting may well connect the deep heat source to shallower depths. The approach of hot spring variation research also has potential benefits for earthquake monitoring and prediction.

The Deepwater Horizon Oil Spill: Ecogenomics of the Deep-Sea Plume

NASA Astrophysics Data System (ADS)

Hazen, T. C.

2012-12-01

The explosion on April 20, 2010 at the BP-leased Deepwater Horizon drilling rig in the Gulf of Mexico off the coast of Louisiana, resulted in oil and gas rising to the surface and the oil coming ashore in many parts of the Gulf, it also resulted in the dispersment of an immense oil plume 4,000 feet below the surface of the water. Despite spanning more than 600 feet in the water column and extending more than 10 miles from the wellhead, the dispersed oil plume was gone within weeks after the wellhead was capped - degraded and diluted to undetectable levels. Furthermore, this degradation took place without significant oxygen depletion. Ecogenomics enabled discovery of new and unclassified species of oil-eating bacteria that apparently lives in the deep Gulf where oil seeps are common. Using 16s microarrays, functional gene arrays, clone libraries, lipid analysis and a variety of hydrocarbon and micronutrient analyses we were able to characterize the oil degraders. Metagenomic sequence data was obtained for the deep-water samples using the Illumina platform. In addition, single cells were sorted and sequenced for the some of the most dominant bacteria that were represented in the oil plume; namely uncultivated representatives of Colwellia and Oceanospirillum. In addition, we performed laboratory microcosm experiments using uncontaminated water collected from The Gulf at the depth of the oil plume to which we added oil and COREXIT. These samples were characterized by 454 pyrotag. The results provide information about the key players and processes involved in degradation of oil, with and without COREXIT, in different impacted environments in The Gulf of Mexico. We are also extending these studies to explore dozens of deep sediment samples that were also collected after the oil spill around the wellhead. This data suggests that a great potential for intrinsic bioremediation of oil plumes exists in the deep-sea and other environs in the Gulf of Mexico.

Deep-sea environment and biodiversity of the West African Equatorial margin

NASA Astrophysics Data System (ADS)

Sibuet, Myriam; Vangriesheim, Annick

2009-12-01

The long-term BIOZAIRE multidisciplinary deep-sea environmental program on the West Equatorial African margin organized in partnership between Ifremer and TOTAL aimed at characterizing the benthic community structure in relation with physical and chemical processes in a region of oil and gas interest. The morphology of the deep Congo submarine channel and the sedimentological structures of the deep-sea fan were established during the geological ZAIANGO project and helped to select study sites ranging from 350 to 4800 m water depth inside or near the channel and away from its influence. Ifremer conducted eight deep-sea cruises on board research vessels between 2000 and 2005. Standardized methods of sampling together with new technologies such as the ROV Victor 6000 and its associated instrumentation were used to investigate this poorly known continental margin. In addition to the study of sedimentary environments more or less influenced by turbidity events, the discovery of one of the largest cold seeps near the Congo channel and deep coral reefs extends our knowledge of the different habitats of this margin. This paper presents the background, objectives and major results of the BIOZAIRE Program. It highlights the work achieved in the 16 papers in this special issue. This synthesis paper describes the knowledge acquired at a regional and local scale of the Equatorial East Atlantic margin, and tackles new interdisciplinary questions to be answered in the various domains of physics, chemistry, taxonomy and ecology to better understand the deep-sea environment in the Gulf of Guinea.

Adaptation and evolution of deep-sea scale worms (Annelida: Polynoidae): insights from transcriptome comparison with a shallow-water species

NASA Astrophysics Data System (ADS)

Zhang, Yanjie; Sun, Jin; Chen, Chong; Watanabe, Hiromi K.; Feng, Dong; Zhang, Yu; Chiu, Jill M. Y.; Qian, Pei-Yuan; Qiu, Jian-Wen

2017-04-01

Polynoid scale worms (Polynoidae, Annelida) invaded deep-sea chemosynthesis-based ecosystems approximately 60 million years ago, but little is known about their genetic adaptation to the extreme deep-sea environment. In this study, we reported the first two transcriptomes of deep-sea polynoids (Branchipolynoe pettiboneae, Lepidonotopodium sp.) and compared them with the transcriptome of a shallow-water polynoid (Harmothoe imbricata). We determined codon and amino acid usage, positive selected genes, highly expressed genes and putative duplicated genes. Transcriptome assembly produced 98,806 to 225,709 contigs in the three species. There were more positively charged amino acids (i.e., histidine and arginine) and less negatively charged amino acids (i.e., aspartic acid and glutamic acid) in the deep-sea species. There were 120 genes showing clear evidence of positive selection. Among the 10% most highly expressed genes, there were more hemoglobin genes with high expression levels in both deep-sea species. The duplicated genes related to DNA recombination and metabolism, and gene expression were only enriched in deep-sea species. Deep-sea scale worms adopted two strategies of adaptation to hypoxia in the chemosynthesis-based habitats (i.e., rapid evolution of tetra-domain hemoglobin in Branchipolynoe or high expression of single-domain hemoglobin in Lepidonotopodium sp.).

Adaptation and evolution of deep-sea scale worms (Annelida: Polynoidae): insights from transcriptome comparison with a shallow-water species

PubMed Central

Zhang, Yanjie; Sun, Jin; Chen, Chong; Watanabe, Hiromi K.; Feng, Dong; Zhang, Yu; Chiu, Jill M.Y.; Qian, Pei-Yuan; Qiu, Jian-Wen

2017-01-01

Polynoid scale worms (Polynoidae, Annelida) invaded deep-sea chemosynthesis-based ecosystems approximately 60 million years ago, but little is known about their genetic adaptation to the extreme deep-sea environment. In this study, we reported the first two transcriptomes of deep-sea polynoids (Branchipolynoe pettiboneae, Lepidonotopodium sp.) and compared them with the transcriptome of a shallow-water polynoid (Harmothoe imbricata). We determined codon and amino acid usage, positive selected genes, highly expressed genes and putative duplicated genes. Transcriptome assembly produced 98,806 to 225,709 contigs in the three species. There were more positively charged amino acids (i.e., histidine and arginine) and less negatively charged amino acids (i.e., aspartic acid and glutamic acid) in the deep-sea species. There were 120 genes showing clear evidence of positive selection. Among the 10% most highly expressed genes, there were more hemoglobin genes with high expression levels in both deep-sea species. The duplicated genes related to DNA recombination and metabolism, and gene expression were only enriched in deep-sea species. Deep-sea scale worms adopted two strategies of adaptation to hypoxia in the chemosynthesis-based habitats (i.e., rapid evolution of tetra-domain hemoglobin in Branchipolynoe or high expression of single-domain hemoglobin in Lepidonotopodium sp.). PMID:28397791

A Comprehensive Phylogenetic Analysis of the Scleractinia (Cnidaria, Anthozoa) Based on Mitochondrial CO1 Sequence Data

PubMed Central

Kitahara, Marcelo V.; Cairns, Stephen D.; Stolarski, Jarosław; Blair, David; Miller, David J.

2010-01-01

Background Classical morphological taxonomy places the approximately 1400 recognized species of Scleractinia (hard corals) into 27 families, but many aspects of coral evolution remain unclear despite the application of molecular phylogenetic methods. In part, this may be a consequence of such studies focusing on the reef-building (shallow water and zooxanthellate) Scleractinia, and largely ignoring the large number of deep-sea species. To better understand broad patterns of coral evolution, we generated molecular data for a broad and representative range of deep sea scleractinians collected off New Caledonia and Australia during the last decade, and conducted the most comprehensive molecular phylogenetic analysis to date of the order Scleractinia. Methodology Partial (595 bp) sequences of the mitochondrial cytochrome oxidase subunit 1 (CO1) gene were determined for 65 deep-sea (azooxanthellate) scleractinians and 11 shallow-water species. These new data were aligned with 158 published sequences, generating a 234 taxon dataset representing 25 of the 27 currently recognized scleractinian families. Principal Findings/Conclusions There was a striking discrepancy between the taxonomic validity of coral families consisting predominantly of deep-sea or shallow-water species. Most families composed predominantly of deep-sea azooxanthellate species were monophyletic in both maximum likelihood and Bayesian analyses but, by contrast (and consistent with previous studies), most families composed predominantly of shallow-water zooxanthellate taxa were polyphyletic, although Acroporidae, Poritidae, Pocilloporidae, and Fungiidae were exceptions to this general pattern. One factor contributing to this inconsistency may be the greater environmental stability of deep-sea environments, effectively removing taxonomic “noise” contributed by phenotypic plasticity. Our phylogenetic analyses imply that the most basal extant scleractinians are azooxanthellate solitary corals from deep-water, their divergence predating that of the robust and complex corals. Deep-sea corals are likely to be critical to understanding anthozoan evolution and the origins of the Scleractinia. PMID:20628613

Modeling of Acoustic Field Statistics for Deep and Shallow Water Environments and 2015 CANAPE Pilot Study Moored Oceanographic Observations

DTIC Science & Technology

2015-09-30

into acoustic fluctuation calculations. In the Philippine Sea, models of eddies, internal tides, internal waves, and fine structure ( spice ) are...needed, while in the shallow water case a models of the random linear internal waves and spice are lacking. APPROACH The approach to this research is to

Evolution of body size, vision, and biodiversity of coral-associated organisms: evidence from fossil crustaceans in cold-water coral and tropical coral ecosystems.

PubMed

Klompmaker, Adiël A; Jakobsen, Sten L; Lauridsen, Bodil W

2016-06-16

Modern cold-water coral and tropical coral environments harbor a highly diverse and ecologically important macrofauna of crustaceans that face elevated extinction risks due to reef decline. The effect of environmental conditions acting on decapod crustaceans comparing these two habitats is poorly understood today and in deep time. Here, we compare the biodiversity, eye socket height as a proxy for eye size, and body size of decapods in fossil cold-water and tropical reefs that formed prior to human disturbance. We show that decapod biodiversity is higher in fossil tropical reefs from The Netherlands, Italy, and Spain compared to that of the exceptionally well-preserved Paleocene (Danian) cold-water reef/mound ecosystem from Faxe (Denmark), where decapod diversity is highest in a more heterogeneous, mixed bryozoan-coral habitat instead of in coral and bryozoan-dominated facies. The relatively low diversity at Faxe was not influenced substantially by the preceding Cretaceous/Paleogene extinction event that is not apparent in the standing diversity of decapods in our analyses, or by sampling, preservation, and/or a latitudinal diversity gradient. Instead, the lower availability of food and fewer hiding places for decapods may explain this low diversity. Furthermore, decapods from Faxe are larger than those from tropical waters for half of the comparisons, which may be caused by a lower number of predators, the delayed maturity, and the increased life span of crustaceans in deeper, colder waters. Finally, deep-water specimens of the benthic crab Caloxanthus from Faxe exhibit a larger eye socket size compared to congeneric specimens from tropical reefs, suggesting that dim light conditions favored the evolution of relatively large eyes. The results suggest a strong habitat control on the biodiversity of crustaceans in coral-associated environments and that the diversity difference between deep, cold-water reefs and tropical reefs evolved at least ~63 million years ago. Futhermore, body size and vision in crustaceans evolved in response to environmental conditions in the deep sea. We highlight the usefulness of ancient reefs to study organismal evolution and ecology.

Microbial production and oxidation of methane in deep subsurface

NASA Astrophysics Data System (ADS)

Kotelnikova, Svetlana

2002-10-01

The goal of this review is to summarize present studies on microbial production and oxidation of methane in the deep subterranean environments. Methane is a long-living gas causing the "greenhouse" effect in the planet's atmosphere. Earlier, the deep "organic carbon poor" subsurface was not considered as a source of "biogenic" methane. Evidence of active methanogenesis and presence of viable methanogens including autotrophic organisms were obtained for some subsurface environments including water-flooded oil-fields, deep sandy aquifers, deep sea hydrothermal vents, the deep sediments and granitic groundwater at depths of 10 to 2000 m below sea level. As a rule, the deep subterranean microbial populations dwell at more or less oligotrophic conditions. Molecular hydrogen has been found in a variety of subsurface environments, where its concentrations were significantly higher than in the tested surface aquatic environments. Chemolithoautotrophic microorganisms from deep aquifers that could grow on hydrogen and carbon dioxide can act as primary producers of organic carbon, initiating heterotrophic food chains in the deep subterranean environments independent of photosynthesis. "Biogenic" methane has been found all over the world. On the basis of documented occurrences, gases in reservoirs and older sediments are similar and have the isotopic character of methane derived from CO 2 reduction. Groundwater representing the methanogenic end member are characterized by a relative depletion of dissolved organic carbon (DOC) in combination with an enrichment in 13C in inorganic carbon, which is consistent with the preferential reduction of 12CO 2 by autotrophic methanogens or acetogens. The isotopic composition of methane formed via CO 2 reduction is controlled by the δ13C of the original CO 2 substrate. Literature data shows that CH 4 as heavy as -40‰ or -50‰ can be produced by the microbial reduction of isotopically heavy CO 2. Produced methane may be oxidized microbially to carbon dioxide. Microbial methane oxidation is a biogeochemical process that limits the release of methane, a greenhouse gas from anaerobic environments. Anaerobic methane oxidation plays an important role in marine sediments. Similar processes may take place in deep subsurface and thus fuel the deep microbial community. Organisms or consortia responsible for anaerobic methane oxidation have not yet been cultured, although diverse aerobic methanotrophs have been isolated from a variety of underground niches. The presence of aerobic methanotrophs in the anoxic subsurface remains to be explained. The presence of methane in the deep subsurface have been shown all over the world. The flux of gases between the deep subsurface and the atmosphere is driven by the concentration gradient from depth to the atmosphere. However, methane is consumed by methanotrophs on the way of its evolution in oxidized environments and is transformed to organic form, available for further microbial processing. When the impact of subsurface environments to global warming is estimated, it is necessary to take into account the activity of methane-producing Archaea and methane-oxidizing biofilters in groundwater. Microbial production and oxidation of methane is involved in the carbon cycle in the deep subsurface environments.

The deep-sea as a final global sink of semivolatile persistent organic pollutants? Part I: PCBs in surface and deep-sea dwelling fish of the north and south Atlantic and the Monterey Bay Canyon (California).

PubMed

Froescheis, O; Looser, R; Cailliet, G M; Jarman, W M; Ballschmiter, K

2000-03-01

The understanding of the global environmental multiphase distribution of persistent organic pollutants (POPs) as a result of the physico-chemical properties of the respective compounds is well established. We have analysed the results of a vertical transport of POPs from upper water layers (0-200 m) to the deepwater region (> 800 m) in terms of the contamination of the biophase in both water layers. The contents of persistent organochlorine compounds like polychlorinated biphenyls (PCBs) in fish living in the upper water layers of the North Atlantic and the South Atlantic, and at the continental shelf of California (Marine Sanctuary Monterey Bay and its deep-sea Canyon) are compared to the levels in deep-sea or bottom dwelling fish within the same geographic area. The deep-sea biota show significantly higher burdens as compared to surface-living species of the same region. There are also indications for recycling processes of POPs--in this case the PCBs--in the biophase of the abyss as well. It can be concluded that the bio- and geo phase of the deep-sea may act similarly as the upper horizons of forest and grasslands on the continents as an ultimate global sink for POPs in the marine environment.

Cryptic Role of Zero-Valent Sulfur in Metal and Metalloid Geochemistry in Euxinic Waters

NASA Astrophysics Data System (ADS)

Helz, G. R.

2014-12-01

Natural waters that are isolated from the atmosphere in confined aquifers, euxinic basins and sediment pore waters often become sulfidic. These waters are conventionally described simply as reducing environments. But because nature does not constrain their exposure to reducing equivalents (e.g. from organic matter) and oxidizing equivalents (e.g. from Fe,Mn oxides), these reducing environments in fact vary cryptically in their redox characteristics. The implications for trace metal and metalloid cycles are only beginning to be explored. The activity of zero-valent sulfur (aS0), a virtual thermodynamic property, is a potentially useful index for describing this variation. At a particular temperature and ionic strength, aS0 can be quantified from knowledge of pH and the total S(0) to total S(-II) ratio. Although data are incomplete, the deep waters of the Black Sea (aS0 ca. 0.3) appear to be more reducing than the deep waters of the Cariaco Basin (aS0 ca. 0.5) even though both are perennially sulfidic. An apparent manifestation is a greater preponderance of greigite relative to mackinawite in the Cariaco Basin. Interestingly, greigite is stable relative to mackinawite in both basins but predominates only at the higher aS0. Values of aS0 in sulfidic natural waters span the range over which Hg-polysulfide complexes gain predominance over Hg sulfide complexes. Competition between these ligands is thought to influence biological methylation, mercury's route into aquatic and human food chains. In sulfidic deep ground waters, the redox state and consequent mobility of As, a global human hazard, will depend on aS0. At intermediate sulfide concentrations, higher aS0 favors more highly charged and thus less mobile As(V) species relative to As(III) species despite the overall reducing characteristics of such waters. Helz, G.R. (2014) Activity of zero-valent sulfur in sulfidic natural waters. Geochem. Trans. In press.

Life and Death on Mars and Earth

NASA Technical Reports Server (NTRS)

Zahnle, K. J.; Sleep, N. H.

1999-01-01

Failure to discover life on Mars has led a great many experts to conclude that it must be hiding. Where? The likeliest hiding places are deep beneath the surface, where geothermal heat could permit liquid water. In this the search for life on Mars parallels the search for water on Mars. Liquid water has been, at least on occasion, a geologically significant presence on the surface. Channels were cut and plains dissected. This water is now hidden, in all likelihood having drained to the base of the porous regolith, where it fills possibly frozen aquifers. Presumably any surviving biota has followed the water from the surface to its hiding places in the deep. Accordingly, we have extended our environmental impact assessment of the environmental hazards posed by large asteroid and comet impacts to Mars, and compare its case to Earth's. In particular, we address the continuous habitability of surface and subsurface environments.

Colonization of over a thousand Cibicidoides wuellerstorfi (foraminifera: Schwager, 1866) on artificial substrates in seep and adjacent off-seep locations in dysoxic, deep-sea environments

NASA Astrophysics Data System (ADS)

Burkett, Ashley M.; Rathburn, Anthony E.; Elena Pérez, M.; Levin, Lisa A.; Martin, Jonathan B.

2016-11-01

After ~1 yr on the seafloor at water depths of ~700 m on Hydrate Ridge in the Pacific, eight colonization experiments composed primarily of a plastic mesh cube (from here on refered to as SEA3, for Seafloor Epibenthic Attachment Cubes) were colonized by 1076 Cibicidoides wuellerstorfi on ~1841 cm2 of experimental substrate. This species is typically considered an indicator of well-oxygenated conditions, and recruitment of such large numbers in bottom waters with low dissolved oxygen availability (0.24-0.37 mL/L) indicate that this taxon may not be as limited by oxygen as previously thought. Clues about substrate preferences were evident from the distribution, or lack thereof, of individuals among plastic mesh, coated steel frame, wooden dowels and reflective tape. Abundance, individual size distributions within cage populations and isotopic biogeochemistry of living foraminifera colonizing experimental substrates were compared between active seep and adjacent off-seep experiment locations, revealing potential differences between these environments. Few studies have examined foraminiferal colonization of hard substrates in the deep-sea and to our knowledge no previous study has compared foraminiferal colonization of active seep and off-seep substrates from the same region. This study provides initial results of recruitment, colonization, geochemical and morphological aspects of the paleoceanographically significant species, C. wuellerstorfi, from dynamic deep-sea environments. Further experimental deployments of SEA3s will provide a means to assess relatively unknown ecologic dynamics of important foraminiferal deep-sea species.

Exploitation of deep-sea resources: the urgent need to understand the role of high pressure in the toxicity of chemical pollutants to deep-sea organisms.

PubMed

Mestre, Nélia C; Calado, Ricardo; Soares, Amadeu M V M

2014-02-01

The advent of industrial activities in the deep sea will inevitably expose deep-sea organisms to potentially toxic compounds. Although international regulations require environmental risk assessment prior to exploitation activities, toxicity tests remain focused on shallow-water model species. Moreover, current tests overlook potential synergies that may arise from the interaction of chemicals with natural stressors, such as the high pressures prevailing in the deep sea. As pressure affects chemical reactions and the physiology of marine organisms, it will certainly affect the toxicity of pollutants arising from the exploitation of deep-sea resources. We emphasize the need for environmental risk assessments based on information generated from ecotoxicological trials that mimic, as close as possible, the deep-sea environment, with emphasis to a key environmental factor - high hydrostatic pressure. Copyright © 2013 Elsevier Ltd. All rights reserved.

Microplastic pollution identified in deep-sea water and ingested by benthic invertebrates in the Rockall Trough, North Atlantic Ocean.

PubMed

Courtene-Jones, Winnie; Quinn, Brian; Gary, Stefan F; Mogg, Andrew O M; Narayanaswamy, Bhavani E

2017-12-01

Microplastics are widespread in the natural environment and present numerous ecological threats. While the ultimate fate of marine microplastics are not well known, it is hypothesized that the deep sea is the final sink for this anthropogenic contaminant. This study provides a quantification and characterisation of microplastic pollution ingested by benthic macroinvertebrates with different feeding modes (Ophiomusium lymani, Hymenaster pellucidus and Colus jeffreysianus) and in adjacent deep water > 2200 m, in the Rockall Trough, Northeast Atlantic Ocean. Despite the remote location, microplastic fibres were identified in deep-sea water at a concentration of 70.8 particles m -3 , comparable to that in surface waters. Of the invertebrates examined (n = 66), 48% ingested microplastics with quantities enumerated comparable to coastal species. The number of ingested microplastics differed significantly between species and generalized linear modelling identified that the number of microplastics ingested for a given tissue mass was related to species and not organism feeding mode or the length or overall weight of the individual. Deep-sea microplastics were visually highly degraded with surface areas more than double that of pristine particles. The identification of synthetic polymers with densities greater and less than seawater along with comparable quantities to the upper ocean indicates processes of vertical re-distribution. This study presents the first snapshot of deep ocean microplastics and the quantification of microplastic pollution in the Rockall Trough. Additional sampling throughout the deep-sea is required to assess levels of microplastic pollution, vertical transportation and sequestration, which have the potential to impact the largest global ecosystem. Copyright © 2017 Elsevier Ltd. All rights reserved.

Microbial community composition and function in the Tonga Trench: from 400m below the sea surface to 9100m water depth and from 0 to 2 m below the seafloor.

NASA Astrophysics Data System (ADS)

Leon Zayas, R. I.; Bartlett, D.; Biddle, J.

2016-12-01

Exploration of the deep ocean has expanded our understanding of oceanic ecosystems including continental margins and mid-ocean ridges, but little is known about the deepest sites on Earth, oceanic trenches. In this study, sediment and water samples were collected from the Tonga Trench at 9100m below sea level. These include four water column samples at depths of 400m, 3000m, 5000m and 9100m, and sediment samples at 0, 1, and 2 meter below the seafloor (mbsf). DNA was extracted and sequencing was performed for the recovery of metagenomic data for all samples. The analysis of the sediment samples from Tonga Trench has provided a new perspective of life in the deep ocean. The data for microbial community composition and metabolic profiles at the surface sediments, 0 mbsf, suggest that the microbes are present and taxonomically similar to the water column microbes, and perform an array of aerobic as well as anaerobic metabolisms, including degradation of organic carbon, oxidative phosphorylation, fermentation, nitrate reduction and sulfur oxidation among others. On the other hand, at 1 and 2 mbsf, the microbial community has diminished richness and diversity when compared to 0 mbsf and is potentially environmentally degraded due to the lack of quality data recoverable. Tonga Trench water column metagenomes are compared to other deep and hadal environments to better understand how different geographical locations, water masses and depth affect microbial community composition, distribution and metabolic potential. To our knowledge, this is the deepest metagenome analyzed to date (9100m), presenting an unprecedented look at one of the deepest environments on our planet.

Spatial Distribution of Viruses Associated with Planktonic and Attached Microbial Communities in Hydrothermal Environments

PubMed Central

Nunoura, Takuro; Kazama, Hiromi; Noguchi, Takuroh; Inoue, Kazuhiro; Akashi, Hironori; Yamanaka, Toshiro; Toki, Tomohiro; Yamamoto, Masahiro; Furushima, Yasuo; Ueno, Yuichiro; Yamamoto, Hiroyuki; Takai, Ken

2012-01-01

Viruses play important roles in marine surface ecosystems, but little is known about viral ecology and virus-mediated processes in deep-sea hydrothermal microbial communities. In this study, we examined virus-like particle (VLP) abundances in planktonic and attached microbial communities, which occur in physical and chemical gradients in both deep and shallow submarine hydrothermal environments (mixing waters between hydrothermal fluids and ambient seawater and dense microbial communities attached to chimney surface areas or macrofaunal bodies and colonies). We found that viruses were widely distributed in a variety of hydrothermal microbial habitats, with the exception of the interior parts of hydrothermal chimney structures. The VLP abundance and VLP-to-prokaryote ratio (VPR) in the planktonic habitats increased as the ratio of hydrothermal fluid to mixing water increased. On the other hand, the VLP abundance in attached microbial communities was significantly and positively correlated with the whole prokaryotic abundance; however, the VPRs were always much lower than those for the surrounding hydrothermal waters. This is the first report to show VLP abundance in the attached microbial communities of submarine hydrothermal environments, which presented VPR values significantly lower than those in planktonic microbial communities reported before. These results suggested that viral lifestyles (e.g., lysogenic prevalence) and virus interactions with prokaryotes are significantly different among the planktonic and attached microbial communities that are developing in the submarine hydrothermal environments. PMID:22210205

The Upside-Down Biosphere: Evidence for the Partially Oxygenated Oceans During the Archean Eon

NASA Technical Reports Server (NTRS)

Domagal-Goldman, Shawn

2014-01-01

This is a commentary on the preceding chapter by Ohmoto et al., in which it is suggested that oxygen concentrations have been high throughout Earth history. This is a contentious suggestion at odds with the prevailing view in the field, which contends that atmospheric oxygen concentrations rose from trace levels to a few percent of modern-day levels around 2.5 b.y. ago. This comment notes that many of the data sets cited by Ohmoto et al. as evidence for a relatively oxidized environment come from deep-ocean settings. This presents a possibility to reconcile some of these data and suggestions with the overwhelming evidence for an atmosphere free of oxygen at that time. Specifically, it is possible that deep-ocean waters were relatively oxidized with respect to certain redox pairs. These deep-ocean waters would have been more oxidized than surface waters, thus representing an "upside-down biosphere," as originally proposed 25 years ago by Jim Walker.

Stakeholders Opinions on Multi-Use Deep Water Offshore Platform in Hsiao-Liu-Chiu, Taiwan

PubMed Central

Sie, Ya-Tsune; Chang, Yang-Chi; Lu, Shiau-Yun

2018-01-01

This paper describes a group model building activity designed to elicit the potential effects a projected multi-use deep water offshore platform may have on its local environment, including ecological and socio-economic issues. As such a platform is proposed for construction around the island of Hsiao-Liu-Chiu, Taiwan, we organized several meetings with the local stakeholders and structured the debates using group modeling methods to promote consensus. During the process, the participants iteratively built and revised a causal-loop diagram that summarizes their opinions. Overall, local stakeholders concluded that a multi-use deep water offshore marine platform might have beneficial effects for Hsiao-Liu-Chiu because more tourists and fish could be attracted by the structure, but they also raised some potential problems regarding the law in Taiwan and the design of the offshore platform, especially its resistance to extreme weather. We report the method used and the main results and insights gained during the process. PMID:29415521

Environmental Conditions in a Carpathian Deep Sea Basin During the Period Preceding Oceanic Anoxic Event 2 - A Case Study from the Skole Nappe

NASA Astrophysics Data System (ADS)

Bąk, Krzysztof; Bąk, Marta; Górny, Zbigniew; Wolska, Anna

2015-01-01

Hemipelagic green clayey shales and thin muddy turbidites accumulated in a deep sea environment below the CCD in the Skole Basin, a part of the Outer Carpathian realm, during the Middle Cenomanian. The hemipelagites contain numerous radiolarians, associated with deep-water agglutinated foraminifera. These sediments accumulated under mesotrophic conditions with limited oxygen concentration. Short-term periodic anoxia also occurred during that time. Muddy turbidity currents caused deposition of siliciclastic and biogenic material, including calcareous foramini-fers and numerous sponge spicules. The preservation and diversity of the spicules suggests that they originate from disarticulation of moderately diversified sponge assemblages, which lived predominantly in the neritic-bathyal zone. Analyses of radiolarian ecological groups and pellets reflect the water column properties during the sedimentation of green shales. At that time, surface and also intermediate waters were oxygenated enough and sufficiently rich in nutri-ents to enable plankton production. Numerous, uncompacted pellets with nearly pristine radiolarian skeletons inside show that pelletization was the main factor of radiolarian flux into the deep basin floor. Partly dissolved skeletons indicate that waters in the Skole Basin were undersaturated in relation to silica content. Oxygen content might have been depleted in the deeper part of the water column causing periodic anoxic conditions which prevent rapid bacterial degra-dation of the pellets during their fall to the sea floor.

Relationship between environment and the occurrence of the deep-water rose shrimp Aristeus antennatus (Risso, 1816) in the Blanes submarine canyon (NW Mediterranean)

NASA Astrophysics Data System (ADS)

Sardà, F.; Company, J. B.; Bahamón, N.; Rotllant, G.; Flexas, M. M.; Sánchez, J. D.; Zúñiga, D.; Coenjaerts, J.; Orellana, D.; Jordà, G.; Puigdefábregas, J.; Sánchez-Vidal, A.; Calafat, A.; Martín, D.; Espino, M.

2009-09-01

We performed a multidisciplinary study characterizing the relationships between hydrodynamic conditions (currents and water masses) and the presence and abundance of the deep-water rose shrimp Aristeus antennatus in a submarine canyon (Blanes canyon in the NW Mediterranean Sea). This species is heavily commercially exploited and is the main target species of a bottom trawl fishery. Seasonal fluctuations in landings are attributed to spatio-temporal movements by this species associated with submarine canyons in the study area. Despite the economic importance of this species and the decreases in catches in the area in recent years, few studies have provided significant insight into the environmental conditions driving shrimp distribution. We therefore measured daily A. antennatus catches over the course of an entire year and analyzed this time series in terms of daily average temperature, salinity, mean kinetic energy (MKE), and eddy kinetic energy (EKE) values using generalized additive models and decision trees. A. antennatus was captured between 600 and 900 m in the Blanes canyon, depths that include Levantine Intermediate Water (LIW) and the underlying Western Mediterranean Deep Water (WMDW). The greatest catches were associated with relatively salty waters (38.5-38.6), low MKE values (6 and 9 cm 2 s -2) and moderate EKE values (10 and 20 cm 2 s -2). Deep-water rose shrimp occurrence appears to be driven in a non-linear manner by environmental conditions including local temperature. A. antennatus appears to prefer relatively salty (LIW) waters and low currents (MKE) with moderate variability (EKE).

Sedimentary characteristics and depositional model of a Paleocene-Eocene salt lake in the Jiangling Depression, China

NASA Astrophysics Data System (ADS)

Yu, Xiaocan; Wang, Chunlian; Liu, Chenglin; Zhang, Zhaochong; Xu, Haiming; Huang, Hua; Xie, Tengxiao; Li, Haonan; Liu, Jinlei

2015-11-01

We studied the sedimentary characteristics of a Paleocene-Eocene salt lake in the Jiangling Depression through field core observation, thin section identification, scanning electron microscopy, and X-ray diffraction analysis. On the basis of sedimentary characteristics we have summarized the petrological and mineralogical characteristics of the salt lake and proposed 9 types of grade IV salt rhythms. The deposition shows a desalting to salting order of halite-argillaceous-mudstone-mud dolostonemud anhydrock-glauberite-halite. The relationship among grade IV rhythms, water salinity and climate fluctuations was analyzed. Based on the analysis of the relationship between boron content and mudstone color and by combining the mineralogy and sedimentary environment characteristics, we propose that the early and late Paleocene Shashi Formation in the Jiangling Depression was a paleolacustrine depositional environment with a high salt content, which is a representation of the shallow water salt lake depositional model. The middle Paleocene Shashi Formation and the early Eocene Xingouzui Formation were salt and brackish sedimentary environments with low salt content in a deep paleolake, which represents a deep salt lake depositional model.

Irrigated Agriculture, Saudi Arabia

NASA Technical Reports Server (NTRS)

1990-01-01

In Saudi Arabia, center-pivot, swing-arm irrigated agriculture complexes such as the one imaged at Jabal Tuwayq (20.5N, 45.0 E) extract deep fossil water reserves to achieve food crop production self sufficiency in this desert environment. The significance of the Saudi expanded irrigated agriculture is that the depletion of this finite water resource is a short term solution to a long term need that will still exist when the water has been extracted.

Irrigated Agriculture, Saudi Arabia

NASA Image and Video Library

1990-01-20

In Saudi Arabia, center-pivot, swing-arm irrigated agriculture complexes such as the one imaged at Jabal Tuwayq (20.5N, 45.0 E) extract deep fossil water reserves to achieve food crop production self sufficiency in this desert environment. The significance of the Saudi expanded irrigated agriculture is that the depletion of this finite water resource is a short term solution to a long term need that will still exist when the water has been extracted.

Unprotected karst resources in western Iran: the environmental impacts of intensive agricultural pumping on the covered karstic aquifer, a case in Kermanshah province

NASA Astrophysics Data System (ADS)

Taheri, Kamal; Taheri, Milad; Parise, Mario

2015-04-01

Bare and covered karst areas, with developed karstic aquifers, cover 35 percent of the Kermanshah province in western Iran. These aquifers are the vital sources for drinking and agricultural water supplies. Over the past decade, intensive groundwater use (exploitation) for irrigation imposed a significant impact on the carbonate environments. The huge amount of groundwater over-exploitations has been carried out and still goes on by local farmers in the absence of appropriate governance monitoring control. Increasing in water demands, for more intense crop production, is an important driving force toward groundwater depletion in alluvial aquifers. Progressive groundwater over-exploitations from underlying carbonate rocks have led to dramatic drawdown in alluvial aquifers and deep karst water tables. Detecting new sources of groundwater extractions and prohibiting the karst water utilization for agricultural use could be the most effective strategy to manage the sustainability of covered karst aquifers. Anthropogenic pressures on covered karst aquifers have magnified the drought impacts and caused dryness of most of the karst springs and deep wells. In this study, the combination of geophysical and geological studies was used to estimate the most intensively exploited agricultural zones of Islam Abad plain in the southwestern Kermanshah province using GIS. The results show that in the past decade a great number of deep wells were drilled through the overburden alluvial aquifer and reached the deep karst water resources. However, the difficulties involved in monitoring deep wells in covered karst aquifer were the main cause of karst water depletion. Overexploitation from both alluvial and karst aquifers is the main reason for drying out the Arkawazi, Sharafshah, Gawrawani karst springs, and the karst drinking water wells 1, 3 and 5 of Islam Abad city. Karst spring landscape destructions, fresh water supply deficit for inhabitants, decreasing of tourism and recreational activities are some outcomes of imbalance uses of unprotected karst water resources in Islam Abad plain.

Evolutionary process of deep-sea bathymodiolus mussels.

PubMed

Miyazaki, Jun-Ichi; de Oliveira Martins, Leonardo; Fujita, Yuko; Matsumoto, Hiroto; Fujiwara, Yoshihiro

2010-04-27

Since the discovery of deep-sea chemosynthesis-based communities, much work has been done to clarify their organismal and environmental aspects. However, major topics remain to be resolved, including when and how organisms invade and adapt to deep-sea environments; whether strategies for invasion and adaptation are shared by different taxa or unique to each taxon; how organisms extend their distribution and diversity; and how they become isolated to speciate in continuous waters. Deep-sea mussels are one of the dominant organisms in chemosynthesis-based communities, thus investigations of their origin and evolution contribute to resolving questions about life in those communities. We investigated worldwide phylogenetic relationships of deep-sea Bathymodiolus mussels and their mytilid relatives by analyzing nucleotide sequences of the mitochondrial cytochrome c oxidase subunit I (COI) and NADH dehydrogenase subunit 4 (ND4) genes. Phylogenetic analysis of the concatenated sequence data showed that mussels of the subfamily Bathymodiolinae from vents and seeps were divided into four groups, and that mussels of the subfamily Modiolinae from sunken wood and whale carcasses assumed the outgroup position and shallow-water modioline mussels were positioned more distantly to the bathymodioline mussels. We provisionally hypothesized the evolutionary history of Bathymodilolus mussels by estimating evolutionary time under a relaxed molecular clock model. Diversification of bathymodioline mussels was initiated in the early Miocene, and subsequently diversification of the groups occurred in the early to middle Miocene. The phylogenetic relationships support the "Evolutionary stepping stone hypothesis," in which mytilid ancestors exploited sunken wood and whale carcasses in their progressive adaptation to deep-sea environments. This hypothesis is also supported by the evolutionary transition of symbiosis in that nutritional adaptation to the deep sea proceeded from extracellular to intracellular symbiotic states in whale carcasses. The estimated evolutionary time suggests that the mytilid ancestors were able to exploit whales during adaptation to the deep sea.

Direct nutritional link between 600-m deep cold-water corals and surface productivity

NASA Astrophysics Data System (ADS)

Soetaert, Karline; Mohn, Christian; Rengstorff, Anna; Grehan, Anthony; van Oevelen, Dick

2016-04-01

Cold-water corals (CWC) form deep-sea reefs that are found in all of the world's oceans, with an areal extent at par with that of tropical coral reefs, and are recognised hotspots of biodiversity and metabolic activity. Yet, it remains largely enigmatic how these rich CWC reefs can thrive in a cold and dark environment that is considered to be strongly food-limited. Here, we use a novel benthic-pelagic modeling approach, which involves coupling models of hydrodynamics, biogeochemistry and habitat suitability, to unravel organic matter delivery to reef mounds at a water depth of 600 m that are capped with a thriving CWC reef community at Rockall Bank (NE Atlantic). Model simulations show that the interaction between 300-m high reef mounds and spring tidal currents induces episodic downwelling events that establish a vertical coupling between 600-m deep CWC with surface productivity. We therefore conclude that there is a positive feedback between CWC mound growth and organic matter supply. This episodic downwelling strongly enhances carbon sequestration to the deep ocean and the ubiquitous occurrence of topographic rises along the ocean margins suggests that a topographically-induced benthic-pelagic carbon pump could be of global importance.

Transitional changes in microfossil assemblages in the Japan Sea from the Late Pliocene to Early Pleistocene related to global climatic and local tectonic events

NASA Astrophysics Data System (ADS)

Itaki, Takuya

2016-12-01

Many micropaleontological studies based on data from on-land sections, oil wells, and deep-sea drilling cores have provided important information about environmental changes in the Japan Sea that are related to the global climate and the local tectonics of the Japanese Islands. Here, major changes in the microfossil assemblages during the Late Pliocene to Early Pleistocene are reviewed. Late Pliocene (3.5-2.7 Ma) surface-water assemblages were characterized mainly by cold-temperate planktonic flora and fauna (nannofossils, diatoms, radiolarians, and planktonic foraminifera), suggesting that nutrient-rich North Pacific surface waters entered the Japan Sea via northern straits. The common occurrence of Pacific-type deep-water radiolarians during this period also suggests that deep water from the North Pacific entered the Japan Sea via the northern straits, indicating a sill depth >500 m. A weak warm-water influence is recognized along the Japanese coast, suggesting a small inflow of warm water via a southern strait. Nannofossil and sublittoral ostracod assemblages record an abrupt cooling event at 2.75 Ma that correlates with the onset of the Northern Hemisphere glaciation. Subsequently, cold intermediate- and deep-water assemblages of ostracods and radiolarians increased in abundance, suggesting active ventilation and the formation of the Japan Sea Proper Water, associated with a strengthened winter monsoon. Pacific-type deep-water radiolarians also disappeared around 2.75 Ma, which is attributed to the intermittent occurrence of deep anoxic environments and limited migration from the North Pacific, resulting from the near-closure or shallowing of the northern strait by a eustatic fall in sea level and tectonic uplift of northeastern Japan. A notable reduction in primary productivity from 2.3 to 1.3 Ma also suggests that the nutrient supply from the North Pacific was restricted by the near-closure of the northern strait. An increase in the abundance of subtropical surface fauna suggests that the inflow of the Tsushima Warm Current into the Japan Sea via a southern strait began at 1.7 Ma. The opening of the southern strait may have occurred after the subsidence of southwestern Japan.

Controls on deep drainage beneath the root soil zone in snowmelt-dominated environments

NASA Astrophysics Data System (ADS)

Hammond, J. C.; Harpold, A. A.; Kampf, S. K.

2017-12-01

Snowmelt is the dominant source of streamflow generation and groundwater recharge in many high elevation and high latitude locations, yet we still lack a detailed understanding of how snowmelt is partitioned between the soil, deep drainage, and streamflow under a variety of soil, climate, and snow conditions. Here we use Hydrus 1-D simulations with historical inputs from five SNOTEL snow monitoring sites in each of three regions, Cascades, Sierra, and Southern Rockies, to investigate how inter-annual variability on water input rate and duration affects soil saturation and deep drainage. Each input scenario was run with three different soil profiles of varying hydraulic conductivity, soil texture, and bulk density. We also created artificial snowmelt scenarios to test how snowmelt intermittence affects deep drainage. Results indicate that precipitation is the strongest predictor (R2 = 0.83) of deep drainage below the root zone, with weaker relationships observed between deep drainage and snow persistence, peak snow water equivalent, and melt rate. The ratio of deep drainage to precipitation shows a stronger positive relationship to melt rate suggesting that a greater fraction of input becomes deep drainage at higher melt rates. For a given amount of precipitation, rapid, concentrated snowmelt may create greater deep drainage below the root zone than slower, intermittent melt. Deep drainage requires saturation below the root zone, so saturated hydraulic conductivity serves as a primary control on deep drainage magnitude. Deep drainage response to climate is mostly independent of soil texture because of its reliance on saturated conditions. Mean water year saturations of deep soil layers can predict deep drainage and may be a useful way to compare sites in soils with soil hydraulic porosities. The unit depth of surface runoff often is often greater than deep drainage at daily and annual timescales, as snowmelt exceeds infiltration capacity in near-surface soil layers. These results suggest that processes affecting the duration of saturation below the root zone could compromise deep recharge, including changes in snowmelt rate and duration as well as the depth and rate of ET losses from the soil profile.

Stakeholder perspectives on the importance of rare-species research for deep-sea environmental management

NASA Astrophysics Data System (ADS)

Turner, Phillip J.; Campbell, Lisa M.; Van Dover, Cindy L.

2017-07-01

The apparent prevalence of rare species (rarity) in the deep sea is a concern for environmental management and conservation of biodiversity. Rare species are often considered at risk of extinction and, in terrestrial and shallow water environments, have been shown to play key roles within an ecosystem. In the deep-sea environment, current research focuses primarily on abundant species and deep-sea stakeholders are questioning the importance of rare species in ecosystem functioning. This study asks whether deep-sea stakeholders (primarily scientists) view rare-species research as a priority in guiding environmental management. Delphi methodology (i.e., an iterative survey approach) was used to understand views about whether or not 'deep-sea scientists should allocate more resources to research on rare species in the deep sea, even if this means less resources might be available for abundant-species research.' Results suggest little consensus regarding the prioritization of resources for rare-species research. From Survey 1 to Survey 3, the average participant response shifted toward a view that rare-species research is not a priority if it comes at a cost to research on abundant species. Participants pointed to the need for a balanced approach and highlighted knowledge gaps about even the most fundamental questions, including whether rare species are truly 'rare' or simply under-sampled. Participants emphasized the lack of basic biological knowledge for rare and abundant species, particularly abundant meio- and microscopic species, as well as uncertainty in the roles rare and abundant species play in ecosystem processes. Approaches that jointly consider the role of rare and abundant species in ecosystem functioning (e.g., biological trait analysis) may help to clarify the extent to which rare species need to be incorporated into deep-sea environment management in order to maintain ecosystem functioning.

Disentangling the record of diagenesis, local redox conditions, and global seawater chemistry during the latest Ordovician glaciation

NASA Astrophysics Data System (ADS)

Ahm, Anne-Sofie C.; Bjerrum, Christian J.; Hammarlund, Emma U.

2017-02-01

The Late Ordovician stratigraphic record integrates glacio-eustatic processes, water-column redox conditions and carbon cycle dynamics. This complex stratigraphic record, however, is dominated by deposits from epeiric seas that are susceptible to local physical and chemical processes decoupled from the open ocean. This study contributes a unique deep water basinal perspective to the Late Ordovician (Hirnantian) glacial record and the perturbations in seawater chemistry that may have contributed to the Hirnantian mass extinction event. We analyze recently drilled cores and outcrop samples from the upper Vinini Formation in central Nevada and report combined trace- and major element geochemistry, Fe speciation (FePy /FeHR and FeHR /FeT), and stable isotope chemostratigraphy (δ13COrg and δ34SPy). Measurements of paired samples from outcrop and core reveal that reactive Fe is preserved mainly as pyrite in core samples, while outcrop samples have been significantly altered as pyrite has been oxidized and remobilized by modern weathering processes. Fe speciation in the more pristine core samples indicates persistent deep water anoxia, at least locally through the Late Ordovician, in contrast to the prevailing interpretation of increased Hirnantian water column oxygenation in shallower environments. Deep water redox conditions were likely decoupled from shallower environments by a basinal shift in organic matter export driven by decreasing rates of organic matter degradation and decreasing shelf areas. The variable magnitude in the record of the Hirnantian carbon isotope excursion may be explained by this increased storage of isotopically light carbon in the deep ocean which, in combination with increased glacio-eustatic restriction, would strengthen lateral- and vertical gradients in seawater chemistry. We adopt multivariate statistical methods to deconstruct the spatial and temporal re-organization of seawater chemistry during the Hirnantian glaciation and attempt to isolate the latent magnitude and global perturbation in the carbon cycle. We speculate, using a two component mixing model and residual estimates from principal component analysis, that the secular open ocean Hirnantian C isotope excursion possibly amounts to only ∼ +1.5‰. Such an increase could be mechanistically driven by the combination of sea-level fall, persistent deep water anoxia, and cooler glacial temperatures that increased the organic carbon burial efficiency in the deeper basins.

Evaluation of students' perception of their learning environment and approaches to learning

NASA Astrophysics Data System (ADS)

Valyrakis, Manousos; Cheng, Ming

2015-04-01

This work presents the results of two case studies designed to assess the various approaches undergraduate and postgraduate students undertake for their education. The first study describes the results and evaluation of an undergraduate course in Water Engineering which aims to develop the fundamental background knowledge of students on introductory practical applications relevant to the practice of water and hydraulic engineering. The study assesses the effectiveness of the course design and learning environment from the perception of students using a questionnaire addressing several aspects that may affect student learning, performance and satisfaction, such as students' motivation, factors to effective learning, and methods of communication and assessment. The second study investigates the effectiveness of supervisory arrangements based on the perceptions of engineering undergraduate and postgraduate students. Effective supervision requires leadership skills that are not taught in the University, yet there is rarely a chance to get feedback, evaluate this process and reflect. Even though the results are very encouraging there are significant lessons to learn in improving ones practice and develop an effective learning environment to student support and guidance. The findings from these studies suggest that students with high level of intrinsic motivation are deep learners and are also top performers in a student-centered learning environment. A supportive teaching environment with a plethora of resources and feedback made available over different platforms that address students need for direct communication and feedback has the potential to improve student satisfaction and their learning experience. Finally, incorporating a multitude of assessment methods is also important in promoting deep learning. These results have deep implications about student learning and can be used to further improve course design and delivery in the future.

High fungal diversity and abundance recovered in the deep-sea sediments of the Pacific Ocean.

PubMed

Xu, Wei; Pang, Ka-Lai; Luo, Zhu-Hua

2014-11-01

Knowledge about the presence and ecological significance of bacteria and archaea in the deep-sea environments has been well recognized, but the eukaryotic microorganisms, such as fungi, have rarely been reported. The present study investigated the composition and abundance of fungal community in the deep-sea sediments of the Pacific Ocean. In this study, a total of 1,947 internal transcribed spacer (ITS) regions of fungal rRNA gene clones were recovered from five sediment samples at the Pacific Ocean (water depths ranging from 5,017 to 6,986 m) using three different PCR primer sets. There were 16, 17, and 15 different operational taxonomic units (OTUs) identified from fungal-universal, Ascomycota-, and Basidiomycota-specific clone libraries, respectively. Majority of the recovered sequences belonged to diverse phylotypes of Ascomycota (25 phylotypes) and Basidiomycota (18 phylotypes). The multiple primer approach totally recovered 27 phylotypes which showed low similarities (≤97 %) with available fungal sequences in the GenBank, suggesting possible new fungal taxa occurring in the deep-sea environments or belonging to taxa not represented in the GenBank. Our results also recovered high fungal LSU rRNA gene copy numbers (3.52 × 10(6) to 5.23 × 10(7)copies/g wet sediment) from the Pacific Ocean sediment samples, suggesting that the fungi might be involved in important ecological functions in the deep-sea environments.

Integrated carbon, sulfur, and nitrogen isotope chemostratigraphy of the Ediacaran Lantian Formation in South China: Spatial gradient, ocean redox oscillation, and fossil distribution.

PubMed

Wang, W; Guan, C; Zhou, C; Peng, Y; Pratt, L M; Chen, X; Chen, L; Chen, Z; Yuan, X; Xiao, S

2017-07-01

The Ediacaran Doushantuo Formation in South China is a prime target for geobiological investigation because it offers opportunities to integrate chemostratigraphic and paleobiological data. Previous studies were mostly focused on successions in shallow-water shelf facies, but data from deep-water successions are needed to fully understand basinal redox structures. Here, we report δ 13 C carb , δ 13 C org , δ 34 S pyr , δ 34 S CAS , and δ 15 N sed data from a drill core of the fossiliferous Lantian Formation, which is a deep-water equivalent of the Doushantuo Formation. Our data confirm a large (>10‰) spatial gradient in δ 13 C carb in the lower Doushantuo/Lantian formations, but this gradient is probably due to the greater sensitivity of carbonate-poor deep-water sediments to isotopic mixing with 13 C-depleted carbonate cements. A pronounced negative δ 13 C carb excursion (EN3) in the upper Doushantuo/Lantian formations, however, is spatially consistent and may be an equivalent of the Shuram excursion. δ 34 S pyr is more negative in deeper-water facies than in shallow-water facies, particularly in the lower Doushantuo/Lantian formations, and this spatial pattern is interpreted as evidence for ocean redox stratification: Pyrite precipitated in euxinic deep waters has lower δ 34 S pyr than that formed within shallow-water sediments. The Lantian Formation was probably deposited in oscillating oxic and euxinic conditions. Euxinic black shales have higher TOC and TN contents, but lower δ 34 S pyr and δ 15 N sed values. In euxinic environments, pyrite was predominantly formed in the water column and organic nitrogen was predominantly derived from nitrogen fixation or NH 4 + assimilation because of quantitative denitrification, resulting in lower δ 34 S pyr and δ 15 N sed values. Benthic macroalgae and putative animals occur exclusively in euxinic black shales. If preserved in situ, these organisms must have lived in brief oxic episodes punctuating largely euxinic intervals, only to be decimated and preserved when the local environment switched back to euxinia again. Thus, taphonomy and ecology were the primary factors controlling the stratigraphic distribution of macrofossils in the Lantian Formation. © 2017 John Wiley & Sons Ltd.

SWIM: A Semi-Analytical Ocean Color Inversion Algorithm for Optically Shallow Waters

NASA Technical Reports Server (NTRS)

McKinna, Lachlan I. W.; Werdell, P. Jeremy; Fearns, Peter R. C. S.; Weeks, Scarla J.; Reichstetter, Martina; Franz, Bryan A.; Shea, Donald M.; Feldman, Gene C.

2014-01-01

Ocean color remote sensing provides synoptic-scale, near-daily observations of marine inherent optical properties (IOPs). Whilst contemporary ocean color algorithms are known to perform well in deep oceanic waters, they have difficulty operating in optically clear, shallow marine environments where light reflected from the seafloor contributes to the water-leaving radiance. The effect of benthic reflectance in optically shallow waters is known to adversely affect algorithms developed for optically deep waters [1, 2]. Whilst adapted versions of optically deep ocean color algorithms have been applied to optically shallow regions with reasonable success [3], there is presently no approach that directly corrects for bottom reflectance using existing knowledge of bathymetry and benthic albedo.To address the issue of optically shallow waters, we have developed a semi-analytical ocean color inversion algorithm: the Shallow Water Inversion Model (SWIM). SWIM uses existing bathymetry and a derived benthic albedo map to correct for bottom reflectance using the semi-analytical model of Lee et al [4]. The algorithm was incorporated into the NASA Ocean Biology Processing Groups L2GEN program and tested in optically shallow waters of the Great Barrier Reef, Australia. In-lieu of readily available in situ matchup data, we present a comparison between SWIM and two contemporary ocean color algorithms, the Generalized Inherent Optical Property Algorithm (GIOP) and the Quasi-Analytical Algorithm (QAA).

Early diagenesis in the sediments of the Congo deep-sea fan dominated by massive terrigenous deposits: Part II - Iron-sulfur coupling

NASA Astrophysics Data System (ADS)

Taillefert, Martial; Beckler, Jordon S.; Cathalot, Cécile; Michalopoulos, Panagiotis; Corvaisier, Rudolph; Kiriazis, Nicole; Caprais, Jean-Claude; Pastor, Lucie; Rabouille, Christophe

2017-08-01

Deep-sea fans are well known depot centers for organic carbon that should promote sulfate reduction. At the same time, the high rates of deposition of unconsolidated metal oxides from terrigenous origin may also promote metal-reducing microbial activity. To investigate the eventual coupling between the iron and sulfur cycles in these environments, shallow sediment cores (< 50 cm) across various channels and levees in the Congo River deep-sea fan ( 5000 m) were profiled using a combination of geochemical methods. Interestingly, metal reduction dominated suboxic carbon remineralization processes in most of these sediments, while dissolved sulfide was absent. In some 'hotspot' patches, however, sulfate reduction produced large sulfide concentrations which supported chemosynthetic-based benthic megafauna. These environments were characterized by sharp geochemical boundaries compared to the iron-rich background environment, suggesting that FeS precipitation efficiently titrated iron and sulfide from the pore waters. A companion study demonstrated that methanogenesis was active in the deep sediment layers of these patchy ecosystems, suggesting that sulfate reduction was promoted by alternative anaerobic processes. These highly reduced habitats could be fueled by discrete, excess inputs of highly labile natural organic matter from Congo River turbidites or by exhumation of buried sulfide during channel flank erosion and slumping. Sulfidic conditions may be maintained by the mineralization of decomposition products from local benthic macrofauna or bacterial symbionts or by the production of more crystalline Fe(III) oxide phases that are less thermodynamically favorable than sulfate reduction in these bioturbated sediments. Overall, the iron and sulfur biogeochemical cycling in this environment is unique and much more similar to a coastal ecosystem than a deep-sea environment.

Delving into the Deep Biosphere

NASA Astrophysics Data System (ADS)

Grim, S. L.; Sogin, M. L.; Boetius, A.; Briggs, B. R.; Brazelton, W. J.; D'Hondt, S. L.; Edwards, K. J.; Fisk, M. R.; Gaidos, E.; Gralnick, J.; Hinrichs, K.; Lazar, C.; Lavalleur, H.; Lever, M. A.; Marteinsson, V.; Moser, D. P.; Orcutt, B.; Pedersen, K.; Popa, R.; Ramette, A.; Schrenk, M. O.; Sylvan, J. B.; Smith, A. R.; Teske, A.; Walsh, E. A.; Colwell, F. S.

2013-12-01

The Census of Deep Life organized an international survey of microbial community diversity in terrestrial and marine deep subsurface environments. Habitats included subsurface continental fractured rock aquifers, volcanic and metamorphic subseafloor sedimentary units from the open ocean, subsurface oxic and anoxic sediments and underlying basaltic oceanic crust, and their overlying water columns. Our survey employed high-throughput pyrosequencing of the hypervariable V4-V6 16S rRNA gene of bacteria and archaea. We detected 1292 bacterial genera representing 40 phyla, and 99 archaeal genera from 30 phyla. Of these, a core group of thirteen bacterial genera occurred in every environment. A genus of the South African Goldmine Group (Euryarchaeota) was always present whenever archaea were detected. Members of the rare biosphere in one system often represented highly abundant taxa in other environments. Dispersal could account for this observation but mechanisms of transport remain elusive. Ralstonia (Betaproteobacteria) represented highly abundant taxa in marine communities and terrestrial rock, but generally low abundance organisms in groundwater. Some of these taxa could represent sample contamination, and their extensive distribution in several systems requires further assessment. An unknown Sphingobacteriales (Bacteroidetes) genus, Stenotrophomonas (Gammaproteobacteria), Acidovorax and Aquabacterium (both Betaproteobacteria), a Chlorobiales genus, and a TM7 genus were in the core group as well but more prevalent in terrestrial environments. Similarly, Bacillus (Firmicutes), a new cyanobacterial genus, Bradyrhizobium and Sphingomonas (both Alphaproteobacteria), a novel Acidobacteriaceae genus, and Variovorax (Betaproteobacteria) frequently occurred in marine systems but represented low abundance taxa in other environments. Communities tended to cluster by biome and material, and many genera were unique to systems. For example, certain Rhizobiales (Alphaproteobacteria) only occurred in groundwater, and select Firmicutes and actinobacterial taxa were specific to rock environments. We continue to investigate the ecological and physiological context of these organisms. By combining deep sequencing of microbial communities and geochemical and physical evaluations of their environments, we bring to light the diversity and scope of the deep biosphere and insight into the factors that determine the nature of these communities.

Deep-water fisheries at the Atlantic Frontier

NASA Astrophysics Data System (ADS)

Gordon, J. D. M.

2001-05-01

The deep sea is often thought of as a cold, dark and uniform environment with a low-fish biomass, much of which is highly adapted for life in a food-poor environment. While this might be true of the pelagic fish living in the water column, it is certainly not true of the demersal fish which live on or close to the bottom on the continental slopes around the British Isles (the Atlantic Frontier). These fish are currently being commercially exploited. There is growing evidence to support the view that success of the demersal fish assemblages depends on the pelagic or benthopelagic food sources that impinge both vertically and horizontally onto the slope. There are several quite separate and distinct deep-water fisheries on the Atlantic Frontier. It is a physical barrier, the Wyville-Thomson Ridge, which results in the most significant division of the fisheries. The Ridge, which has a minimum depth of about 500 m, separates the warmer deep Atlantic waters from the much colder Norwegian Sea water and as a result, the deep-water fisheries to the west of the Hebrides and around the offshore banks are quite different from those of the Faroe-Shetland Channel (West of Shetland). The fisheries to the West of the Hebrides can be further divided by the fishing method used into bottom trawl, semipelagic trawl and longline. The bottom-trawl fisheries extend from the shelf-slope break down to about 1700 m and the target species varies with depth. The smallest vessels in the fleet fish on the upper slope, where an important target species is the anglerfish or monkfish ( Lophius spp.). On the mid-slope the main target species are blue ling ( Molva dypterygia) and roundnose grenadier ( Coryphaenoides rupestris), with bycatches of black scabbardfish ( Aphanopus carbo) and deep-water sharks. On the lower slope orange roughy ( Hoplostethus atlanticus) is an important target species. The major semipelagic trawl fishery is a seasonal fishery on spawning aggregations of blue whiting ( Micromesistius poutassou). The other semipelagic fishery is on spawning aggregations of the greater silver smelt or argentine ( Argentina silus). Spanish and UK vessels that target mainly hake ( Merluccius merluccius) and a Norwegian fleet that targets ling ( Molva molva), blue ling and tusk ( Brosme brosme) dominate the upper slope longline fishery. West of Shetland, the fishery on the upper slope has some similarities with that of the Hebridean slope, with anglerfish and blue ling being important target species. A quite different fishery occurs in the transition zone between the Atlantic and Norwegian Sea waters. Here the main target species is Greenland halibut ( Reinhardtius hippoglossoides). Below the transition zone biomass decreases rapidly and there is no fishery. It is generally agreed that many deep-water species have slow growth, a high age at first maturity and a low fecundity, which makes them vulnerable to over-exploitation. Other features of these fishes such as high mortality of discards and escapees will add to the problems. Despite this the only management procedures in place are general limitation of effort measures within the area of jurisdiction of the European Union.

Survival of the fittest: phosphorus burial in the sulfidic deep Black Sea

NASA Astrophysics Data System (ADS)

Kraal, Peter; Dijkstra, Nikki; Behrends, Thilo; Slomp, Caroline

2016-04-01

The Black Sea is characterized by permanently anoxic and sulfidic deep waters. Studies of the mechanisms of P burial in such a setting can be used to improve our understanding of P cycling in modern coastal systems undergoing eutrophication and ancient oceans during periods of anoxia in Earth's past. Here, we present phosphorus and iron (Fe) pools as determined in surface sediments along a transect from oxic shallow waters to sulfidic deep waters in the northwestern Black Sea, using a combination of bulk chemical analyses and micro-scale X-ray fluorescence (μXRF) and X-ray absorption spectroscopy (μXAS). We show that under oxic bottom water conditions, ferric iron oxides (Fe(III)ox) in surficial sediment efficiently scavenge dissolved phosphate from pore waters. Under these conditions, Fe(III)ox-bound P constitutes the main P pool at the sediment surface, but rapidly declines with depth in the sediment due to anoxic diagenesis. The transition from shallow (oxic) to deep (sulfidic) waters along the depth transect is reflected in a slight increase in the fraction of organic P. We also show evidence for authigenic calcium phosphate formation under sulfidic conditions at relatively low dissolved PO4 concentrations. Furthermore, we provide spectroscopic evidence for the presence of Fe(II)-Mn(II)-Mg-P minerals in sediments of the sulfidic deep basin. We hypothesize that these minerals are formed as a result of input of Fe(III)ox-P from shallower waters and subsequent transformation in either the water column or sediment. This finding suggests an unexpected strength of Fe-P shuttling from the shelf to the deep basin. While the presence of Fe-P species in such a highly sulfidic environment is remarkable, further analysis suggests that this P pool may not be quantitatively significant. In fact, our results indicate that some of the P that is interpreted as Fe-bound P based on chemical extraction may in fact be Ca-associated PO4 consisting of a combination of fish debris and adsorbed P.

"THE DYNAMICS OF ARSENIC IN SATURATED POROUS MEDIA: FATE AND TRANSPORT MODELING FOR DEEP-WATER SEDIMENTS, WETLAND SEDIMENTS, AND GROUNDWATER ENVIRONMENTS," WATER ROCK INTERACTIONS, ORE DEPOSITS, AND ENVIRONMENTAL GEOCHEMISTRY: A TRIBUTE TO DAVID CRERAR. (R827288)

EPA Science Inventory

The perspectives, information and conclusions conveyed in research project abstracts, progress reports, final reports, journal abstracts and journal publications convey the viewpoints of the principal investigator and may not represent the views and policies of ORD and EPA. Concl...

Recent distribution of lead in the Indian Ocean reflects the impact of regional emissions.

PubMed

Echegoyen, Yolanda; Boyle, Edward A; Lee, Jong-Mi; Gamo, Toshitaka; Obata, Hajime; Norisuye, Kazuhiro

2014-10-28

Humans have injected lead (Pb) massively into the earth surface environment in a temporally and spatially evolving pattern. A significant fraction is transported by the atmosphere into the surface ocean where we can observe its transport by ocean currents and sinking particles. This study of the Indian Ocean documents high Pb concentrations in the northern and tropical surface waters and extremely low Pb levels in the deep water. North of 20°S, dissolved Pb concentrations decrease from 42 to 82 pmol/kg in surface waters to 1.5-3.3 pmol/kg in deep waters. South of 20°S, surface water Pb concentrations decrease from 21 pmol/kg at 31°S to 7 pmol/kg at 62°S. This surface Pb concentration gradient reflects a southward decrease in anthropogenic Pb emissions. The upper waters of the north and central Indian Ocean have high Pb concentrations resulting from recent regional rapid industrialization and a late phase-out of leaded gasoline, and these concentrations are now higher than currently seen in the central North Pacific and North Atlantic oceans. The Antarctic sector of the Indian Ocean shows very low concentrations due to limited regional anthropogenic Pb emissions, high scavenging rates, and rapid vertical mixing, but Pb still occurs at higher levels than would have existed centuries ago. Penetration of Pb into the northern and central Indian Ocean thermocline waters is minimized by limited ventilation. Pb concentrations in the deep Indian Ocean are comparable to the other oceans at the same latitude, and deep waters of the central Indian Ocean match the lowest observed oceanic Pb concentrations.

Tropical Convective Transition Statistics and Causality in the Water Vapor–Precipitation Relation

DOE PAGES

Kuo, Yi-Hung; Neelin, J. David; Mechoso, C. Roberto

2017-03-09

Previous work by various authors has pointed to the role of lower-free-tropospheric humidity in affecting the onset of deep convection in the tropics. Empirical relationships between column water vapor (CWV) and precipitation have been inferred to result from these effects. Evidence from previous work has included deep convective conditional instability calculations for entraining plumes, in which the lower-free-tropospheric environment affects the onset of deep convection due to the differential impact on buoyancy of turbulent entrainment of dry versus moist air. The relationship between deep convection and water vapor is, however, a two-way interaction because convection also moistens the free troposphere.more » The present study adds an additional line of evidence toward fully establishing the causality of the precipitation–water vapor relationship. Parameter perturbation experiments using the coupled Community Earth System Model (CESM) with high-time-resolution output are analyzed for a set of statistics for the transition to deep convection, coordinated with observational diagnostics for the Green Ocean Amazon (GOAmazon) campaign and tropical western Pacific Atmospheric Radiation Measurement (ARM) sites. For low values of entrainment in the deep convective scheme, these statistics are radically altered and the observed pickup of precipitation with CWV is no longer seen. In addition to helping cement the dominant direction of causality in the fast-time-scale precipitation–CWV relationship, the results point to impacts of entrainment on the climatology. Because at low entrainment convection can fire before tropospheric moistening, the climatological values of relative humidity are lower than observed. These findings can be consequential to biases in simulated climate and to projections of climate change.« less

Tropical Convective Transition Statistics and Causality in the Water Vapor–Precipitation Relation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kuo, Yi-Hung; Neelin, J. David; Mechoso, C. Roberto

Previous work by various authors has pointed to the role of lower-free-tropospheric humidity in affecting the onset of deep convection in the tropics. Empirical relationships between column water vapor (CWV) and precipitation have been inferred to result from these effects. Evidence from previous work has included deep convective conditional instability calculations for entraining plumes, in which the lower-free-tropospheric environment affects the onset of deep convection due to the differential impact on buoyancy of turbulent entrainment of dry versus moist air. The relationship between deep convection and water vapor is, however, a two-way interaction because convection also moistens the free troposphere.more » The present study adds an additional line of evidence toward fully establishing the causality of the precipitation–water vapor relationship. Parameter perturbation experiments using the coupled Community Earth System Model (CESM) with high-time-resolution output are analyzed for a set of statistics for the transition to deep convection, coordinated with observational diagnostics for the Green Ocean Amazon (GOAmazon) campaign and tropical western Pacific Atmospheric Radiation Measurement (ARM) sites. For low values of entrainment in the deep convective scheme, these statistics are radically altered and the observed pickup of precipitation with CWV is no longer seen. In addition to helping cement the dominant direction of causality in the fast-time-scale precipitation–CWV relationship, the results point to impacts of entrainment on the climatology. Because at low entrainment convection can fire before tropospheric moistening, the climatological values of relative humidity are lower than observed. These findings can be consequential to biases in simulated climate and to projections of climate change.« less

Incorporation of Metals into Calcite in a Deep Anoxic Granite Aquifer.

PubMed

Drake, Henrik; Mathurin, Frédéric A; Zack, Thomas; Schäfer, Thorsten; Roberts, Nick Mw; Whitehouse, Martin; Karlsson, Andreas; Broman, Curt; Åström, Mats E

2018-01-16

Understanding metal scavenging by calcite in deep aquifers in granite is of importance for deciphering and modeling hydrochemical fluctuations and water-rock interaction in the upper crust and for retention mechanisms associated with underground repositories for toxic wastes. Metal scavenging into calcite has generally been established in the laboratory or in natural environments that cannot be unreservedly applied to conditions in deep crystalline rocks, an environment of broad interest for nuclear waste repositories. Here, we report a microanalytical study of calcite precipitated over a period of 17 years from anoxic, low-temperature (14 °C), neutral (pH: 7.4-7.7), and brackish (Cl: 1700-7100 mg/L) groundwater flowing in fractures at >400 m depth in granite rock. This enabled assessment of the trace metal uptake by calcite under these deep-seated conditions. Aquatic speciation modeling was carried out to assess influence of metal complexation on the partitioning into calcite. The resulting environment-specific partition coefficients were for several divalent ions in line with values obtained in controlled laboratory experiments, whereas for several other ions they differed substantially. High absolute uptake of rare earth elements and U(IV) suggests that coprecipitation into calcite can be an important sink for these metals and analogousactinides in the vicinity of geological repositories.

Molecular diversity of bacterial communities from subseafloor rock samples in a deep-water production basin in Brazil.

PubMed

von der Weid, Irene; Korenblum, Elisa; Jurelevicius, Diogo; Rosado, Alexandre Soares; Dino, Rodolfo; Sebastian, Gina Vasquez; Seldin, Lucy

2008-01-01

The deep subseafloor rock in oil reservoirs represents a unique environment in which a high oilcontamination and very low biomass can be observed. Sampling this environment has been a challenge owing to the techniques used for drilling and coring. In this study, the facilities developed by the Brazilian oil company PETROBRAS for accessing deep subsurface oil reservoirs were used to obtain rock samples at 2,822-2,828 m below the ocean floor surface from a virgin field located in the Atlantic Ocean, Rio de Janeiro. To address the bacterial diversity of these rock samples, PCR amplicons were obtained using the DNA from four core sections and universal primers for 16S rRNA and for APS reductase (aps) genes. Clone libraries were generated from these PCR fragments and 87 clones were sequenced. The phylogenetic analyses of the 16S rDNA clone libraries showed a wide distribution of types in the domain bacteria in the four core samples, and the majority of the clones were identified as belonging to Betaproteobacteria. The sulfate-reducing bacteria community could only be amplified by PCR in one sample, and all clones were identified as belonging to Gammaproteobacteria. For the first time, the bacterial community was assessed in such deep subsurface environment.

The discovery of deep-water seagrass meadows in a pristine Indian Ocean wilderness revealed by tracking green turtles.

PubMed

Esteban, N; Unsworth, R K F; Gourlay, J B Q; Hays, G C

2018-03-21

Our understanding of global seagrass ecosystems comes largely from regions characterized by human impacts with limited data from habitats defined as notionally pristine. Seagrass assessments also largely focus on shallow-water coastal habitats with comparatively few studies on offshore deep-water seagrasses. We satellite tracked green turtles (Chelonia mydas), which are known to forage on seagrasses, to a remote, pristine deep-water environment in the Western Indian Ocean, the Great Chagos Bank, which lies in the heart of one of the world's largest marine protected areas (MPAs). Subsequently we used in-situ SCUBA and baited video surveys to survey the day-time sites occupied by turtles and discovered extensive monospecific seagrass meadows of Thalassodendron ciliatum. At three sites that extended over 128 km, mean seagrass cover was 74% (mean range 67-88% across the 3 sites at depths to 29 m. The mean species richness of fish in seagrass meadows was 11 species per site (mean range 8-14 across the 3 sites). High fish abundance (e.g. Siganus sutor: mean MaxN.site -1  = 38.0, SD = 53.7, n = 5) and large predatory shark (Carcharhinus amblyrhynchos) (mean MaxN.site -1  = 1.5, SD = 0.4, n = 5) were recorded at all sites. Such observations of seagrass meadows with large top predators, are limited in the literature. Given that the Great Chagos Bank extends over approximately 12,500 km 2 and many other large deep submerged banks exist across the world's oceans, our results suggest that deep-water seagrass may be far more abundant than previously suspected. Copyright © 2018 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Hydrologic Regulation of Plant Rooting Depth and Vice Versa

NASA Astrophysics Data System (ADS)

Fan, Y.; Miguez-Macho, G.

2017-12-01

How deep plant roots go and why may hold the answer to several questions regarding the co-evolution of terrestrial life and its environment. In this talk we explore how plant rooting depth responds to the hydrologic plumbing system in the soil/regolith/bedrocks, and vice versa. Through analyzing 2200 root observations of >1000 species along biotic (life form, genus) and abiotic (precipitation, soil, drainage) gradients, we found strong sensitivities of rooting depth to local soil water profiles determined by precipitation infiltration depth from the top (reflecting climate and soil), and groundwater table depth from below (reflecting topography-driven land drainage). In well-drained uplands, rooting depth follows infiltration depth; in waterlogged lowlands, roots stay shallow avoiding oxygen stress below the water table; in between, high productivity and drought can send roots many meters down to groundwater capillary fringe. We explore the global significance of this framework using an inverse model, and the implications to the coevolution of deep roots and the CZ in the Early-Mid Devonian when plants colonized the upland environments.

[Psycrophilic organisms in snow and ice].

PubMed

Kohshima, S

2000-12-01

Psychrophilic and psycrotrophic organisms are important in global ecology as a large proportion of our planet is cold. Two-third of sea-water covering more than 70% of Earth is cold deep sea water with temperature around 2 degrees C, and more than 90% of freshwater is in polar ice-sheets and mountain glaciers. Though biological activity in snow and ice had been believed to be extremely limited, various specialized biotic communities were recently discovered at glaciers of various part of the world. The glacier is relatively simple and closed ecosystem with special biotic community containing various psychrophilic and psycrotrophic organisms. Since psychrophilic organisms was discovered in the deep ice-core recovered from the antarctic ice-sheet and a lake beneath it, snow and ice environments in Mars and Europa are attracting a great deal of scientific attention as possible extraterrestrial habitats of life. This paper briefly reviews the results of the studies on ecology of psychrophilic organisms living in snow and ice environments and their physiological and biochemical adaptation to low temperature.

Temperature, DOC level and basin interactions explain the declining oxygen concentrations in the Bothnian Sea

NASA Astrophysics Data System (ADS)

Ahlgren, Joakim; Grimvall, Anders; Omstedt, Anders; Rolff, Carl; Wikner, Johan

2017-06-01

Hypoxia and oxygen deficient zones are expanding worldwide. To properly manage this deterioration of the marine environment, it is important to identify the causes of oxygen declines and the influence of anthropogenic activities. Here, we provide a study aiming to explain the declining oxygen levels in the deep waters of the Bothnian Sea over the past 20 years by investigating data from environmental monitoring programmes. The observed decline in oxygen concentrations in deep waters was found to be primarily a consequence of water temperature increase and partly caused by an increase in dissolved organic carbon (DOC) in the seawater (R2Adj. = 0.83) as well as inflow from the adjacent sea basin. As none of the tested eutrophication-related predictors were significant according to a stepwise multiple regression, a regional increase in nutrient inputs to the area is unlikely to explain a significant portion of the oxygen decline. Based on the findings of this study, preventing the development of anoxia in the deep water of the Bothnian Sea is dependent on the large-scale measures taken to reduce climate change. In addition, the reduction of the nutrient load to the Baltic Proper is required to counteract the development of hypoxic and phosphate-rich water in the Baltic Proper, which can form deep water in the Bothnian Sea. The relative importance of these sources to oxygen consumption is difficult to determine from the available data, but the results clearly demonstrate the importance of climate related factors such as temperature, DOC and inflow from adjacent basins for the oxygen status of the sea.

The Oceanic Flux Program: A three decade time-series of particle flux in the deep Sargasso Sea

NASA Astrophysics Data System (ADS)

Weber, J. C.; Conte, M. H.

2010-12-01

The Oceanic Flux Program (OFP), 75 km SE of Bermuda, is the longest running time-series of its kind. Initiated in 1978, the OFP has produced an unsurpassed, nearly continuous record of temporal variability in deep ocean fluxes, with a >90% temporal coverage at 3200m depth. The OFP, in conjunction with the co-located Bermuda-Atlantic Time Series (BATS) and the Bermuda Testbed Mooring (BTM) time-series, has provided key observations enabling detailed assessment of how seasonal and non-seasonal variability in the deep ocean is linked with the overlying physical and biogeochemical environment. This talk will focus on the short-term flux variability that overlies the seasonal flux pattern in the Sargasso Sea, emphasizing episodic extreme flux events. Extreme flux events are responsible for much of the year-to-year variability in mean annual flux and are most often observed during early winter and late spring when surface stratification is weak or transient. In addition to biological phenomena (e.g. salp blooms), passage of productive meso-scale features such as eddies, which alter surface water mixing characteristics and surface export fluxes, may initiate some extreme flux events. Yet other productive eddies show a minimal influence on the deep flux, underscoring the importance of upper ocean ecosystem structure and midwater processes on the coupling between the surface ocean environment and deep fluxes. Using key organic and inorganic tracers, causative processes that influence deep flux generation and the strength of the coupling with the surface ocean environment can be identified.

The levels of processing effect under nitrogen narcosis.

PubMed

Kneller, Wendy; Hobbs, Malcolm

2013-01-01

Previous research has consistently demonstrated that inert gas (nitrogen) narcosis affects free recall but not recognition memory in the depth range of 30 to 50 meters of sea water (msw), possibly as a result of narcosis preventing processing when learned material is encoded. The aim of the current research was to test this hypothesis by applying a levels of processing approach to the measurement of free recall under narcosis. Experiment 1 investigated the effect of depth (0-2 msw vs. 37-39 msw) and level of processing (shallow vs. deep) on free recall memory performance in 67 divers. When age was included as a covariate, recall was significantly worse in deep water (i.e., under narcosis), compared to shallow water, and was significantly higher in the deep processing compared to shallow processing conditions in both depth conditions. Experiment 2 demonstrated that this effect was not simply due to the different underwater environments used for the depth conditions in Experiment 1. It was concluded memory performance can be altered by processing under narcosis and supports the contention that narcosis affects the encoding stage of memory as opposed to self-guided search (retrieval).

Potential for hydrogen-oxidizing chemolithoautotrophic and diazotrophic populations to initiate biofilm formation in oligotrophic, deep terrestrial subsurface waters.

PubMed

Wu, Xiaofen; Pedersen, Karsten; Edlund, Johanna; Eriksson, Lena; Åström, Mats; Andersson, Anders F; Bertilsson, Stefan; Dopson, Mark

2017-03-23

Deep terrestrial biosphere waters are separated from the light-driven surface by the time required to percolate to the subsurface. Despite biofilms being the dominant form of microbial life in many natural environments, they have received little attention in the oligotrophic and anaerobic waters found in deep bedrock fractures. This study is the first to use community DNA sequencing to describe biofilm formation under in situ conditions in the deep terrestrial biosphere. In this study, flow cells were attached to boreholes containing either "modern marine" or "old saline" waters of different origin and degree of isolation from the light-driven surface of the earth. Using 16S rRNA gene sequencing, we showed that planktonic and attached populations were dissimilar while gene frequencies in the metagenomes suggested that hydrogen-fed, carbon dioxide- and nitrogen-fixing populations were responsible for biofilm formation across the two aquifers. Metagenome analyses further suggested that only a subset of the populations were able to attach and produce an extracellular polysaccharide matrix. Initial biofilm formation is thus likely to be mediated by a few bacterial populations which were similar to Epsilonproteobacteria, Deltaproteobacteria, Betaproteobacteria, Verrucomicrobia, and unclassified bacteria. Populations potentially capable of attaching to a surface and to produce extracellular polysaccharide matrix for attachment were identified in the terrestrial deep biosphere. Our results suggest that the biofilm populations were taxonomically distinct from the planktonic community and were enriched in populations with a chemolithoautotrophic and diazotrophic metabolism coupling hydrogen oxidation to energy conservation under oligotrophic conditions.

A tracer study of the deep water renewal in the European polar seas

NASA Astrophysics Data System (ADS)

Heinze, Ch.; Schlosser, P.; Koltermann, K. P.; Meincke, J.

1990-09-01

A study of the deep water renewal in the European polar seas (Norwegian Sea, Greenland Sea and Eurasian Basin) based on the distribution of tritium ( 3H), 3He, chlorofluoromethane (F-11 = CCL 3F), salinity and potential temperature is presented. Four different versions of a kinematic box model calibrated with the tracer data yield production rates and turnover times due to deep convection for Greenland Sea Deep Water (0.47-0.59 Sv, 27-34 y) and Eurasian Basin Deep Water (0.97-1.07 Sv, 83-92 y). Model calculations with different deep advective flow patterns (exchange at equal rates between each of the deep water masses or an internal circuit Eurasian Basin-Greenland Sea-Norwegian Sea-Eurasian Basin) give estimates of the deep horizontal transports, resulting in a turnover time of 13-16 years for Norwegian Sea Deep Water. The total turnover times (convection and deep advection) of the Greenland Sea and the Eurasian Basin are estimated to about 10 and 50 years, respectively. Mean hydrographic characteristics of the source water for Greenland Sea Deep Water and Eurasian Basin Deep Water are estimated from minimization of the deviations between modelled and observed hydrographic deep water values. The fractions of surface waters and intermediate waters making up the deep water of the Greenland Sea are estimated to about 80 and 20%, respectively.

Distribution of long-lived radioactive iodine isotope (I-129) in pore waters from the gas hydrate fields on the continental margins: Indication for methane source of gas hydrate deposits

NASA Astrophysics Data System (ADS)

Tomaru, H.; Lu, Z.; Fehn, U.

2011-12-01

Because iodine has a strong association with organic matters in marine environments, pore waters in high methane potential region, in particular gas hydrate occurrences on the continental margins, are enriched significantly in iodine compared with seawater. Natural iodine system is composed of stable and radioactive species, I-129 (half-life of 15.7 Myr) has been used for estimating the age of source formations both for methane and iodine, because iodine can be liberated into pore water during the degradation of organic matter to methane in deep sediments. Here we present I-129 age data in pore waters collected from variety of gas hydrate occurrences on the continental margins. The I-129 ages in pore waters from these locations are significantly older than those of host sediments, indicating long-term transport and accumulation from deep/old sediments. The I-129 ages in the Japan Sea and Okhotsk Sea along the plate boundary between the North American and Amurian Plates correspond to the ages of initial spreading of these marginal seas, pointing to the massive deposition of organic matter for methane generation in deep sediments within limited periods. On the Pacific side of these areas, organic matter-rich back stop is responsible for methane in deep-seated gas hydrate deposits along the Nankai Trough. Deep coaly sequences responsible for deep conventional natural gas deposits are also responsible for overlying gas hydrate deposits off Shimokita Peninsula, NE Japan. Those in the Gulf of Mexico are correlative to the ages of sediments where the top of salt diapirs intrude. Marine sediments on the Pacific Plate subducting beneath the Australian Plate are likely responsible for the methane and iodine in the Hikurangi Trough, New Zealand. These ages reflect well the regional geological settings responsible for generation, transport, and accumulation of methane, I-129 is a key to understand the geological history of gas hydrate deposition.

Dynamic autoinoculation and the microbial ecology of a deep water hydrocarbon irruption

PubMed Central

Valentine, David L.; Mezić, Igor; Maćešić, Senka; Črnjarić-Žic, Nelida; Ivić, Stefan; Hogan, Patrick J.; Fonoberov, Vladimir A.; Loire, Sophie

2012-01-01

The irruption of gas and oil into the Gulf of Mexico during the Deepwater Horizon event fed a deep sea bacterial bloom that consumed hydrocarbons in the affected waters, formed a regional oxygen anomaly, and altered the microbiology of the region. In this work, we develop a coupled physical–metabolic model to assess the impact of mixing processes on these deep ocean bacterial communities and their capacity for hydrocarbon and oxygen use. We find that observed biodegradation patterns are well-described by exponential growth of bacteria from seed populations present at low abundance and that current oscillation and mixing processes played a critical role in distributing hydrocarbons and associated bacterial blooms within the northeast Gulf of Mexico. Mixing processes also accelerated hydrocarbon degradation through an autoinoculation effect, where water masses, in which the hydrocarbon irruption had caused blooms, later returned to the spill site with hydrocarbon-degrading bacteria persisting at elevated abundance. Interestingly, although the initial irruption of hydrocarbons fed successive blooms of different bacterial types, subsequent irruptions promoted consistency in the structure of the bacterial community. These results highlight an impact of mixing and circulation processes on biodegradation activity of bacteria during the Deepwater Horizon event and suggest an important role for mixing processes in the microbial ecology of deep ocean environments. PMID:22233808

Millennial-scale variations of late Pleistocene radiolarian assemblages in the Bering Sea related to environments in shallow and deep waters

NASA Astrophysics Data System (ADS)

Itaki, Takuya; Kim, Sunghan; Rella, Stephan F.; Uchida, Masao; Tada, Ryuji; Khim, Boo-Keun

2012-02-01

A high-resolution record of the radiolarian assemblage from 60 to 10 ka was investigated using a piston core (PC-23A) obtained from the northern slope of the Bering Sea. Faunal changes based on the 29 major radiolarian taxa demonstrated that the surface and deep water conditions in the Bering Sea were related to the orbital and millennial-scale climatic variations known as glacial-interglacial and Dansgaard-Oeschger (D-O) cycles, respectively. During interstadial periods of the D-O cycles, the assemblage was characterized by increases in the high-latitude coastal species Rhizoplegma boreale and the upper-intermediate water species Cycladophora davisiana, while the sea-ice related species Actinomma boreale and A. leptodermum and many deep-water species such as Dictyophimus crisiae and D. hirundo tended to be reduced. This trend was more apparent in two laminated intervals at 15-13.5 and 11.5-11 ka, which were correlated with well-known ice-sheet collapse events that occurred during the last deglaciation: melt-water pulse (MWP)-1A and MWP-1B, respectively. The radiolarian faunal composition in these periods suggests that oceanic conditions were different from today: (1) surface water was affected by increased melt-water discharge from continental ice-sheet, occurring at the same time as an abrupt increase in atmospheric temperature, (2) upper-intermediate water (ca. 200-500 m) was well-ventilated and organic-rich, and (3) lower-intermediate water (ca. 500-1000 m) was oxygen-poor. Conversely, the sea-ice season might have been longer during stadial periods of the D-O cycles and the last glacial maximum (LGM) compared to the interstadial periods and the earliest Holocene. In these colder periods, deep-water species were very abundant, and this corresponded to increases in the oxygen isotope value of benthic foraminifera. Our findings suggest that the oxygen-rich water was present in the lower-intermediate layer resulting from intensified ventilation.

Modelling the photochemical attenuation pathways of the fibrate drug gemfibrozil in surface waters.

PubMed

Fabbri, Debora; Maurino, Valter; Minella, Marco; Minero, Claudio; Vione, Davide

2017-03-01

Gemfibrozil (GFZ) is a relatively persistent pollutant in surface-water environments and it is rather recalcitrant to biological degradation. The GFZ photochemical lifetimes are relatively short in shallow waters with low levels of dissolved organic carbon (DOC), but they can reach the month-year range in deep and high-DOC waters. The main reason is that GFZ undergoes negligible reaction with singlet oxygen or degradation sensitised by the triplet states of chromophoric dissolved organic matter, which are the usually prevalent photochemical pathways in deep and high-DOC sunlit waters. Nitrate and nitrite scarcely affect the overall GFZ lifetimes, but they can shift photodegradation from direct photolysis to the OH process. These two pathways are the main GFZ phototransformation routes, with the direct photolysis prevailing in shallow environments during summer. Under these conditions the GFZ photochemical lifetimes are also shorter and the environmental significance of photodegradation correspondingly higher. The direct photolysis of GFZ under UVB irradiation yielded several transformation intermediates deriving from oxidation or cleavage of the aliphatic lateral chain. A quinone derivative (2,5-dimethyl-1,4-benzoquinone), a likely oxidation product of the transformation intermediate 2,5-dimethylphenol, is expected to be the most acutely and chronically toxic compound arising from GFZ direct photolysis. Interestingly, literature evidence suggests that the same toxic intermediate would be formed upon OH reaction. Copyright © 2016 Elsevier Ltd. All rights reserved.

Two major Cenozoic episodes of phosphogenesis recorded in equatorial Pacific seamount deposits

USGS Publications Warehouse

Hein, J.R.; Hsueh-Wen, Yeh; Gunn, S.H.; Sliter, W.V.; Benninger, L.M.; Chung-Ho, Wang

1993-01-01

The phosphorites occur in a wide variety of forms, but most commonly carbonate fluorapatite (CFA) replaced middle Eocene and older carbonate sediment in a deep water environment (>1000 m). Element ratios distinguish seamount phosphorites from continental margin, plateau, and insular phosphorites. Uranium and thorium contents are low and total rare earch element (REE) contents are generally high. The paleoceanographic conditions initiated and sustained development of phosphorite by accumulation of dissolved phosphorus in the deep sea during relatively stable climatic conditions when oceanic circulation was sluggish. Fluctuations in climate, sealevel, and upwelling that accompanied the climate transitions may have driven cycles of enrichment and depletion of the deep-sea phosphorus reservoir. -from Authors

Farming system context drives the value of deep wheat roots in semi-arid environments

PubMed Central

Lilley, Julianne M.; Kirkegaard, John A.

2016-01-01

The capture of subsoil water by wheat roots can make a valuable contribution to grain yield on deep soils. More extensive root systems can capture more water, but leave the soil in a drier state, potentially limiting water availability to subsequent crops. To evaluate the importance of these legacy effects, a long-term simulation analysis at eight sites in the semi-arid environment of Australia compared the yield of standard wheat cultivars with cultivars that were (i) modified to have root systems which extract more water at depth and/or (ii) sown earlier to increase the duration of the vegetative period and hence rooting depth. We compared simulations with and without annual resetting of soil water to investigate the legacy effects of drier subsoils related to modified root systems. Simulated mean yield benefits from modified root systems declined from 0.1–0.6 t ha−1 when annually reset, to 0–0.2 t ha−1 in the continuous simulation due to a legacy of drier soils (mean 0–32mm) at subsequent crop sowing. For continuous simulations, predicted yield benefits of >0.2 t ha−1 from more extensive root systems were rare (3–10% of years) at sites with shallow soils (<1.0 m), but occurred in 14–44% of years at sites with deeper soils (1.6–2.5 m). Earlier sowing had a larger impact than modified root systems on water uptake (14–31 vs 2–17mm) and mean yield increase (up to 0.7 vs 0–0.2 t ha−1) and the benefits occurred on deep and shallow soils and in more years (9–79 vs 3–44%). Increasing the proportion of crops in the sequence which dry the subsoil extensively has implications for the farming system productivity, and the crop sequence must be managed tactically to optimize overall system benefits. PMID:26976814

Farming system context drives the value of deep wheat roots in semi-arid environments.

PubMed

Lilley, Julianne M; Kirkegaard, John A

2016-06-01

The capture of subsoil water by wheat roots can make a valuable contribution to grain yield on deep soils. More extensive root systems can capture more water, but leave the soil in a drier state, potentially limiting water availability to subsequent crops. To evaluate the importance of these legacy effects, a long-term simulation analysis at eight sites in the semi-arid environment of Australia compared the yield of standard wheat cultivars with cultivars that were (i) modified to have root systems which extract more water at depth and/or (ii) sown earlier to increase the duration of the vegetative period and hence rooting depth. We compared simulations with and without annual resetting of soil water to investigate the legacy effects of drier subsoils related to modified root systems. Simulated mean yield benefits from modified root systems declined from 0.1-0.6 t ha(-1) when annually reset, to 0-0.2 t ha(-1) in the continuous simulation due to a legacy of drier soils (mean 0-32mm) at subsequent crop sowing. For continuous simulations, predicted yield benefits of >0.2 t ha(-1) from more extensive root systems were rare (3-10% of years) at sites with shallow soils (<1.0 m), but occurred in 14-44% of years at sites with deeper soils (1.6-2.5 m). Earlier sowing had a larger impact than modified root systems on water uptake (14-31 vs 2-17mm) and mean yield increase (up to 0.7 vs 0-0.2 t ha(-1)) and the benefits occurred on deep and shallow soils and in more years (9-79 vs 3-44%). Increasing the proportion of crops in the sequence which dry the subsoil extensively has implications for the farming system productivity, and the crop sequence must be managed tactically to optimize overall system benefits. © The Author 2016. Published by Oxford University Press on behalf of the Society for Experimental Biology.

RF Path and Absorption Loss Estimation for Underwater Wireless Sensor Networks in Different Water Environments

PubMed Central

Qureshi, Umair Mujtaba; Shaikh, Faisal Karim; Aziz, Zuneera; Shah, Syed M. Zafi S.; Sheikh, Adil A.; Felemban, Emad; Qaisar, Saad Bin

2016-01-01

Underwater Wireless Sensor Network (UWSN) communication at high frequencies is extremely challenging. The intricacies presented by the underwater environment are far more compared to the terrestrial environment. The prime reason for such intricacies are the physical characteristics of the underwater environment that have a big impact on electromagnetic (EM) signals. Acoustics signals are by far the most preferred choice for underwater wireless communication. Because high frequency signals have the luxury of large bandwidth (BW) at shorter distances, high frequency EM signals cannot penetrate and propagate deep in underwater environments. The EM properties of water tend to resist their propagation and cause severe attenuation. Accordingly, there are two questions that need to be addressed for underwater environment, first what happens when high frequency EM signals operating at 2.4 GHz are used for communication, and second which factors affect the most to high frequency EM signals. To answer these questions, we present real-time experiments conducted at 2.4 GHz in terrestrial and underwater (fresh water) environments. The obtained results helped in studying the physical characteristics (i.e., EM properties, propagation and absorption loss) of underwater environments. It is observed that high frequency EM signals can propagate in fresh water at a shallow depth only and can be considered for a specific class of applications such as water sports. Furthermore, path loss, velocity of propagation, absorption loss and the rate of signal loss in different underwater environments are also calculated and presented in order to understand why EM signals cannot propagate in sea water and oceanic water environments. An optimal solk6ution for underwater communication in terms of coverage distance, bandwidth and nature of communication is presented, along with possible underwater applications of UWSNs at 2.4 GHz. PMID:27322263

RF Path and Absorption Loss Estimation for Underwater Wireless Sensor Networks in Different Water Environments.

PubMed

Qureshi, Umair Mujtaba; Shaikh, Faisal Karim; Aziz, Zuneera; Shah, Syed M Zafi S; Sheikh, Adil A; Felemban, Emad; Qaisar, Saad Bin

2016-06-16

Underwater Wireless Sensor Network (UWSN) communication at high frequencies is extremely challenging. The intricacies presented by the underwater environment are far more compared to the terrestrial environment. The prime reason for such intricacies are the physical characteristics of the underwater environment that have a big impact on electromagnetic (EM) signals. Acoustics signals are by far the most preferred choice for underwater wireless communication. Because high frequency signals have the luxury of large bandwidth (BW) at shorter distances, high frequency EM signals cannot penetrate and propagate deep in underwater environments. The EM properties of water tend to resist their propagation and cause severe attenuation. Accordingly, there are two questions that need to be addressed for underwater environment, first what happens when high frequency EM signals operating at 2.4 GHz are used for communication, and second which factors affect the most to high frequency EM signals. To answer these questions, we present real-time experiments conducted at 2.4 GHz in terrestrial and underwater (fresh water) environments. The obtained results helped in studying the physical characteristics (i.e., EM properties, propagation and absorption loss) of underwater environments. It is observed that high frequency EM signals can propagate in fresh water at a shallow depth only and can be considered for a specific class of applications such as water sports. Furthermore, path loss, velocity of propagation, absorption loss and the rate of signal loss in different underwater environments are also calculated and presented in order to understand why EM signals cannot propagate in sea water and oceanic water environments. An optimal solk6ution for underwater communication in terms of coverage distance, bandwidth and nature of communication is presented, along with possible underwater applications of UWSNs at 2.4 GHz.

The source and distribution of thermogenic dissolved organic matter in the ocean

NASA Astrophysics Data System (ADS)

Dittmar, T.; Suryaputra, I. G. N. A.; Paeng, J.

2009-04-01

Thermogenic organic matter (ThOM) is abundant in the environment. ThOM is produced at elevated temperature and pressure in deep sediments and earth's crust, and it is also a residue of fossil fuel and biomass burning ("black carbon"). Because of its refractory character, it accumulates in soils and sediments and, therefore, may sequester carbon from active cycles. It was hypothesized that a significant component of marine dissolved organic matter (DOM) might be thermogenic. Here we present a detailed data set on the distribution of thermogenic DOM in major water masses of the deep and surface ocean. In addition, several potential sources of thermogenic DOM to the ocean were investigated: active seeps of brine fluids in the deep Gulf of Mexico, rivers, estuaries and submarine groundwaters. Studies on deep-sea hydrothermal vents and aerosol deposition are ongoing. All DOM samples were isolated from seawater via solid phase extraction (SPE-DOM). ThOM was quantified in the extracts as benzene-polycarboxylic acids (BPCAs) after nitric acid oxidation via high-performance liquid chromatography and diode array detection (HPLC-DAD). BPCAs are produced exclusively from fused ring systems and are therefore unambiguous molecular tracers for ThOM. In addition to BPCA determination, the molecular composition and structure of ThOM was characterized in detail via ultrahigh resolution mass spectrometry (FT-ICR-MS). All marine and river DOM samples yielded significant amounts of BPCAs. The cold seep system in the deep Gulf of Mexico, but also black water rivers (like the Suwannee River) were particularly rich in ThOM. Up to 10% of total dissolved organic carbon was thermogenic in both systems. The most abundant BPCA was benzene-pentacarboxylic acid (B5CA). The molecular composition of BPCAs and the FT-ICR-MS data indicate a relatively small number (5-8) of fused aromatic rings per molecule. Overall, the molecular BPCA patterns were very similar independent of the source of ThOM. Petroleum-derived ThOM in the deep Gulf of Mexico had very similar structures than fused ring systems in asphaltenes, but also ThOM in the rivers and groundwaters was similar. First data on aerosols, on the other had, show a clear difference between particulate and dissolved samples. ThOM from aerosols and most soils was characterized by an abundance of benzene-hexacarboxylic acid (B6CA), different from thermogenic DOM. Dissolution processes may cause partial breakdown of larger fused ring systems and thus cause similar structural units in all DOM samples. In the deep ocean, the distribution of thermogenic DOM was relatively homogeneous throughout the water column. The concentration of carbon that resides in thermogenic polycyclic aromatic hydrocarbon varied between 610 and 800 nM (1.5-2% of total dissolved organic carbon). The total amount of thermogenic DOM in the deep ocean is approx. one Peta mole carbon globally. The relatively homogenous distribution of thermogenic DOM in the abyssal ocean indicates that thermogenic DOM behaves virtually inert in the abyssal environment. One of the most striking features is that the oldest water masses, which are not enriched in industrial products (such as the Freon CFC-12) showed highest concentrations of thermogenic DOM. The younger water masses such as Antarctic bottom and intermediate waters are not particularly enriched in thermogenic DOM. This distribution suggests a preindustrial origin of ThOM in the deep ocean. Rivers and deep-sea seep systems were both identified as potential sources of ThOM to the deep ocean. Radiocarbon dating on BPCAs will provide further evidence for the origin of BC in the deep ocean.

Kelvin Wave Influence on the Shallow-to-Deep Transition Over the Amazon

NASA Astrophysics Data System (ADS)

Rowe, A.; Serra, Y. L.

2017-12-01

The suite of observations from GOAmazon and CHUVA offers a unique opportunity to examine land-based convective processes in the tropics, including the poorly represented shallow-to-deep transition. This study uses these data to investigate impacts of Kelvin waves on the the shallow-to-deep transition over the Central Amazon. The Kelvin waves that propagate over the region often originate over the tropical central and east Pacific, with local generation over the Andes also observed. The observed 15 m s-1 phase speed and 4500 km wave length during the two-year campaign are in agreement with previously published studies of these waves across the tropics. Also in agreement with previous studies, we find the waves are most active during the wet season (November-May) for this region. Using four separate convective event classes (clear-sky, nonprecipitating cumulus congestus, afternoon deep convection, and mesoscale convective systems), we examine how the convection preferentially develops for different phases of the Kelvin waves seen during GOAmazon. We additionally examine surface meteorological variables, the vertical thermodynamic and dynamic structure of the troposphere, vertical moist static stability, integrated column water vapor and liquid water, and surface energy fluxes within the context of these convective classes to identify the important environmental factors contributing to observed periods of enhanced deep convection related to the waves. Results suggest that the waves significantly modify the local environment, such as creating a deep layer of moisture throughout the troposphere, favoring more organized convection in the active than in the suppressed phase of the wave. The significance of wave-related environmental modifications are assessed by comparing local rainfall accumulations during Kelvin wave activity to that when the waves are not present. Future work will further explore the shallow-to-deep transition and its modulation by Kelvin wave activity over the Central Amazon in both global and regional model simulations with differing resolution and choice of convective parameterization. This work will test the hypothesis that when the environment is strongly modified by a Kelvin wave, model shallow-to-deep transition will be better simulated than when this forcing is not present.

South Atlantic sag basins: new petroleum system components

DOE Office of Scientific and Technical Information (OSTI.GOV)

Henry, S.G.; Mello, M.R.

Newly discovered pre-salt source rocks, reservoirs and seals need to be included as components to the petroleum systems of both sides of the South Atlantic. These new components lie between the pre-salt rift strata and the Aptian salt layers, forming large, post-rift, thermal subsidence sag basins. These are differentiated from the older rift basins by the lack of syn-rift faulting and a reflector geometry that is parallel to the base salt regional unconformity rather than to the Precambrian basement. These basins are observed in deep water regions overlying areas where both the mantle and the crust have been involved inmore » the extension. This mantle involvement creates post-rift subsiding depocenters in which deposition is continuous while proximal rift-phase troughs with little or no mantle involvement are bypassed and failed to accumulate potential source rocks during anoxic times. These features have been recognized in both West African Kwanza Basin and in the East Brasil Rift systems. The pre-salt source rocks that are in the West African sag basins were deposited in lacustrine brackish to saline water environment and are geochemically distinct from the older, syn-rift fresh to brackish water lakes, as well as from younger, post-salt marine anoxic environments of the drift phase. Geochemical analyses of the source rocks and their oils have shown a developing source rock system evolving from isolated deep rift lakes to shallow saline lakes, and culminating with the infill of the sag basin by large saline lakes to a marginally marine restricted gulf. Sag basin source rocks may be important in the South Atlantic petroleum system by charging deep-water prospects where syn-rift source rocks are overmature and the post-salt sequences are immature.« less

Habitability from the Surface to the Deep

NASA Astrophysics Data System (ADS)

Cox, A. D.; Schmidt, R.; Dahlquist, G. R.; Foster, J.; Dillard, M.

2016-12-01

Merging aqueous geochemical parameters of habitability with microbial identity and activity will help determine microbial contributions to observed water-rock reactions in surface to deep environments. To determine habitability for microbial life and decipher mechanisms by which microbes survive and perform chemical reactions, over one hundred sites in diverse geological and geochemical environs have been sampled for aqueous geochemistry, mineralogy, and microbial identity and activity. Sites ranged from surficial creeks and rivers to the flooded mine shafts beneath to hydrothermal features in the caldera of a supervolcano 250 km distant; these environments contain metal scarcity, extreme anoxia, and wide variations in metal, organic carbon, and oxygen scarcity, respectively. Aqueous geochemistry included in situ measurement of temperature, pH, conductivity, and dissolved oxygen by meters; field spectrophotometry for redox active species; and synchronous sample collection and preservation for water isotopes, major cations and anions, trace elements, and dissolved inorganic and organic carbon, and more. Concurrent collection and preservation of planktonic and sediment biomass at each site will allow for microbial community identification and assessment of microbial activity. DNA extraction and PCR amplification using universal, eukaryotic, bacterial, and archaeal small subunit ribosomal RNA gene primers yielded products for sequencing. For many of the aqueous geochemical parameters analyzed, including Li and B, concentrations in flooded mine shafts fell on a continuum directly between local surface waters and those resulting from hydrothermal alteration suggesting an intermediate level of water-rock interaction in flooded mine shaft habitats. Concentrations of Li and B ranged from low micromolal in surface waters to millimolal in thermal waters. Other elements - Fe, Mn, Zn, and As included - were enriched in anoxic mine shafts by three to four orders of magnitude, due to exposure to and reaction with minerals. Concentrations of Fe and Zn ranged up to tens of millimolal whereas millimolal Mn and submillimolal As concentrations were reached. The transition from mostly unreacted surface water to waters nearly in equilibrium with rock provides vast geochemical habitat for microbes to exploit.

Deep Water Cooling | Climate Neutral Research Campuses | NREL

Science.gov Websites

the Cornell website. Additional examples of research campus geothermal cooling projects include Deep Water Cooling Deep Water Cooling Research campuses that are located near a deep lake or deep plan for your research campus. Considerations Sample Project Related Links Deep water cooling involves

Stratigraphy of lower to middle Paleozoic rocks of northern Nevada and the Antler orogeny

USGS Publications Warehouse

Ketner, Keith B.

2013-01-01

Commonly accepted concepts concerning the lower Paleozoic stratigraphy of northern Nevada are based on the assumption that the deep-water aspects of Ordovician to Devonian siliceous strata are due to their origin in a distant oceanic environment, and their presence where we find them is due to tectonic emplacement by the Roberts Mountains thrust. The concept adopted here is based on the assumption that their deep-water aspects are the result of sea-level rise in the Cambrian, and all of the Paleozoic strata in northern Nevada are indigenous to that area. The lower part of the Cambrian consists mainly of shallow-water cross-bedded sands derived from the craton. The upper part of the Cambrian, and part of the Ordovician, consists mainly of deep-water carbonate clastics carried by turbidity currents from the carbonate shelf in eastern Nevada, newly constructed as a result of sea-level rise. Ordovician to mid-Devonian strata are relatively deep-water siliceous deposits, which are the western facies assemblage. The basal contact of this assemblage on autochthonous Cambrian rocks is exposed in three mountain ranges and is clearly depositional in all three. The western facies assemblage can be divided into distinct stratigraphic units of regional extent. Many stratigraphic details can be explained simply by known changes in sea level. Upper Devonian to Mississippian strata are locally and westerly derived orogenic clastic beds deposited disconformably on the western facies assemblage. This disconformity, clearly exposed in 10 mountain ranges, indicates regional uplift and erosion of the western facies assemblage and absence of local deformation. The disconformity represents the Antler orogeny.

The deep-subsurface sulfate reducer Desulfotomaculum kuznetsovii employs two methanol-degrading pathways.

PubMed

Sousa, Diana Z; Visser, Michael; van Gelder, Antonie H; Boeren, Sjef; Pieterse, Mervin M; Pinkse, Martijn W H; Verhaert, Peter D E M; Vogt, Carsten; Franke, Steffi; Kümmel, Steffen; Stams, Alfons J M

2018-01-16

Methanol is generally metabolized through a pathway initiated by a cobalamine-containing methanol methyltransferase by anaerobic methylotrophs (such as methanogens and acetogens), or through oxidation to formaldehyde using a methanol dehydrogenase by aerobes. Methanol is an important substrate in deep-subsurface environments, where thermophilic sulfate-reducing bacteria of the genus Desulfotomaculum have key roles. Here, we study the methanol metabolism of Desulfotomaculum kuznetsovii strain 17 T , isolated from a 3000-m deep geothermal water reservoir. We use proteomics to analyze cells grown with methanol and sulfate in the presence and absence of cobalt and vitamin B12. The results indicate the presence of two methanol-degrading pathways in D. kuznetsovii, a cobalt-dependent methanol methyltransferase and a cobalt-independent methanol dehydrogenase, which is further confirmed by stable isotope fractionation. This is the first report of a microorganism utilizing two distinct methanol conversion pathways. We hypothesize that this gives D. kuznetsovii a competitive advantage in its natural environment.

Sound of shallow and deep water lobsters: Measurements, analysis, and characterization (L)

NASA Astrophysics Data System (ADS)

Latha, G.; Senthilvadivu, S.; Venkatesan, R.; Rajendran, V.

2005-05-01

Study of sound made by marine species aid in ambient noise studies and characterization. This letter presents the work carried out on measurement of sound made by lobsters in a controlled environment and the data processing and the spectral analysis to identify the frequency contents. Lobsters collected in the shallow waters as well as deep waters in the ocean have been used for the sound measurement. The Panulirus Homarus and Palinustur Waguersis species were kept in a tank in a laboratory and measurements were made. Their fundamental frequencies, harmonics, and peaks are analyzed in the band 3 to 100 kHz under different conditions such as molting and nonmolting states. Analysis with respect to diurnal variations is also carried out. The results show that lobsters produce sound like musical instruments, which agree with the observations of Patek [Nature (London) 411, 153-154 (2001)]. .

Deep-sea ostracode shell chemistry (Mg:Ca ratios) and late Quaternary Arctic Ocean history

USGS Publications Warehouse

Cronin, T. M.; Dwyer, Gary S.; Baker, P.A.; Rodriguez-Lazaro, J.; Briggs, W.M.; ,

1996-01-01

The magnesium:calcium (Mg:Ca) and strontium:calcium (Sr:Ca) ratios were investigated in shells of the benthic ostracode genus Krithe obtained from 64 core-tops from water depths of 73 to 4411 m in the Arctic Ocean and Nordic seas to determine the potential of ostracode shell chemistry for palaeoceanographic study. Shells from the Polar Surface Water (−1 to −1.5°C) had Mg:Ca molar ratios of about 0.006–0.008; shells from Arctic Intermediate Water (+0.3 to +2.0°C) ranged from 0.09 to 0.013. Shells from the abyssal plain and ridges of the Nansen, Amundsen and Makarov basins and the Norwegian and Greenland seas had a wide scatter of Mg:Ca ratios ranging from 0.007 to 0.012 that may signify post-mortem chemical alteration of the shells from Arctic deep-sea environments below about 1000 m water depth. There is a positive correlation (r2 = 0.59) between Mg:Ca ratios and bottom-water temperature in Krithe shells from Arctic and Nordic seas from water depths <900 m. Late Quaternary Krithe Mg:Ca ratios were analysed downcore using material from the Gakkel Ridge (water depths 3047 and 3899 m), the Lomonosov Ridge (water depth 1051 m) and the Amundsen Basin (water depth 4226 m) to test the core-top Mg:Ca temperature calibration. Cores from the Gakkel and Lomonosov ridges display a decrease in Mg:Ca ratios during the interval spanning the last glacial/deglacial transition and the Holocene, perhaps related to a decrease in bottom water temperatures or other changes in benthic environments.

Aquaporin-mediated changes in hydraulic conductivity of deep tree roots accessed via caves.

PubMed

McElrone, Andrew J; Bichler, Justin; Pockman, William T; Addington, Robert N; Linder, C Randal; Jackson, Robert B

2007-11-01

Although deep roots can contribute substantially to whole-tree water use, little is known about deep root functioning because of limited access for in situ measurements. We used a cave system on the Edwards Plateau of central Texas to investigate the physiology of water transport in roots at 18-20 m depth for two common tree species, Quercus fusiformis and Bumelia lanuginosa. Using sap flow and water potential measurements on deep roots, we found that calculated root hydraulic conductivity (RHC) fluctuated diurnally for both species and decreased under shading for B. lanuginosa. To assess whether these dynamic changes in RHC were regulated during initial water absorption by fine roots, we used an ultra-low flowmeter and hydroxyl radical inhibition to measure in situ fine root hydraulic conductivity (FRHC) and aquaporin contribution to FRHC (AQPC), respectively. During the summer, FRHC and AQPC were found to cycle diurnally in both species, with peaks corresponding to the period of highest transpirational demand at midday. During whole-tree shade treatments, B. lanuginosa FRHC ceased diurnal cycling and decreased by 75 and 35% at midday and midnight, respectively, while AQPC decreased by 41 and 30% during both time periods. A controlled growth-chamber study using hydroponically grown saplings confirmed daily cycling and shade-induced reductions in FRHC and AQPC. Winter measurements showed that the evergreen Q. fusiformis maintained high FRHC and AQPC throughout the year, while the deciduous B. lanuginosa ceased diurnal cycling and exhibited its lowest annual values for both parameters in winter. Adjustments in FRHC and AQPC to changing canopy water demands may help the trees maintain the use of reliable water resources from depth and contribute to the success of these species in this semi-arid environment.

Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep-sea hydrocarbon plume.

PubMed

Li, Meng; Jain, Sunit; Baker, Brett J; Taylor, Chris; Dick, Gregory J

2014-01-01

Particulate membrane-associated hydrocarbon monooxygenases (pHMOs) are critical components of the aerobic degradation pathway for low molecular weight hydrocarbons, including the potent greenhouse gas methane. Here, we analysed pHMO gene diversity in metagenomes and metatranscriptomes of hydrocarbon-rich hydrothermal plumes in the Guaymas Basin (GB) and nearby background waters in the deep Gulf of California. Seven distinct phylogenetic groups of pHMO were present and transcriptionally active in both plume and background waters, including several that are undetectable with currently available polymerase chain reaction (PCR) primers. The seven groups of pHMOs included those related to a putative ethane oxidizing Methylococcaceae-like group, a group of the SAR324 Deltaproteobacteria, three deep-sea clades (Deep sea-1/symbiont-like, Deep sea-2/PS-80 and Deep sea-3/OPU3) within gammaproteobacterial methanotrophs, one clade related to Group Z and one unknown group. Differential abundance of pHMO gene transcripts in plume and background suggests niche differentiation between groups. Corresponding 16S rRNA genes reflected similar phylogenetic and transcriptomic abundance trends. The novelty of transcriptionally active pHMOs we recovered from a hydrocarbon-rich hydrothermal plume suggests there are significant gaps in our knowledge of the diversity and function of these enzymes in the environment. © 2013 Society for Applied Microbiology and John Wiley & Sons Ltd.

Supercritical sedimentary structures and bedforms and criteria for recognition in the field: insights from the Middle Eocene deep-marine Morillo and Guaso systems, Ainsa Basin, Spanish Pyrenees

NASA Astrophysics Data System (ADS)

Torley, John; Pickering, Kevin

2017-04-01

It has long been acknowledged that for most submarine slopes with gradients > 0.5, common to many deep-water environments, they should contain abundant evidence of supercritical flows and their deposits. However, it is common for deep-marine sands/sandstones to be routinely modelled using the Bouma (1962) sequence for turbidites. Recently, the importance of supercritical flows has been highlighted from seafloor observations, with numerical and physical experiments. Such experiments have produced previously unrecognised bedforms which fail to be interpreted adequately by Bouma's model, including antidunes, chutes-and-pools, and cyclic steps. Fieldwork in the Middle Eocene Ainsa Basin, Spanish Pyrenees, has been undertaken in the Morillo and Guaso systems of the Upper Hecho Group. Approximately 5,000 beds were measured and documented in detail, e.g., grain size, sedimentary structures, bedforms and facies. Collectively, this data can be used to understand supercritical versus subcritical flow. The relative importance of supercritical flow can then be compared and contrasted within individual ancient deep-marine systems. The Morillo System is relatively coarse-grained, compared with the Guaso System. The results of this research contribute to an improved understanding of the processes in deep-marine systems, and directly benefit the hydrocarbon industry by providing better constraints to predict deep-water reservoir composition and architecture.

Testing the Role of Microbial Ecology, Redox-Mediated Deep Water Production and Hypersalinity on TEX86: Lipids and 16s Sequences from Archaea and Bacteria in the Water Column and Sediments of Orca Basin

NASA Astrophysics Data System (ADS)

Warren, C.; Romero, I.; Ellis, G.; Goddard, E.; Krishnan, S.; Nigro, L. M.; Super, J. R.; Zhang, Y.; Zhuang, G.; Hollander, D. J.; Pagani, M.

2014-12-01

Mesophilic marine archaea and bacteria are known to substantially contribute to the oceanic microbial biomass and play critical roles in global carbon, nitrogen and nutrient cycles. The Orca Basin, a 2400 meter deep bathymetric depression on the continental slope of the north-central Gulf of Mexico, is an ideal environment to examine how redox-dependent biochemical processes control the input and cycling of bacterial and archaea-derived lipid compounds from formation in near-surface water, through secondary recycling processes operating at the redox-transition in the water column, to sedimentary diagenetic processes operating in oxic to anoxic zones within the basin. The lowermost 180 meters of the Orca Basin is characterized by an anoxic, hypersaline brine that is separated from the overlying oxic seawater by a well-defined redox sequence associated with a systematic increasing in salinity from 35 - 250‰. While surface water conditions are viewed as normal marine with a seasonally productive water column, the sub-oxic to anoxic transition zones within the deep-water column and the sediment spans over 200 m allowing the unique opportunity for discrete sampling of resident organisms and lipids. Here we present 16s rRNA sequence data of Bacteria and Archaea collected parallel to GDGT lipid profiles and in situ environmental measurements from the sediment and overlying water column in the intermediate zone of the basin, where movements of chemical transition zones are preserved. We evaluated GDGTs and corresponding taxa across the surface water, chlorophyll maximum, thermocline, and the deep redox boundary, including oxygenation, denitrification, manganese, iron and sulfate reduction zones, to determine if GDGTs are being produced under these conditions and how surface-derived GDGT lipids and the TEX86 signal may be altered. The results have implications for the application of the TEX86 paleotemperature proxy.

Quantitative allochem compositional analysis of Lochkovian-Pragian boundary sections in the Prague Basin (Czech Republic)

NASA Astrophysics Data System (ADS)

Weinerová, Hedvika; Hron, Karel; Bábek, Ondřej; Šimíček, Daniel; Hladil, Jindřich

2017-06-01

Quantitative allochem compositional trends across the Lochkovian-Pragian boundary Event were examined at three sections recording the proximal to more distal carbonate ramp environment of the Prague Basin. Multivariate statistical methods (principal component analysis, correspondence analysis, cluster analysis) of point-counted thin section data were used to reconstruct facies stacking patterns and sea-level history. Both the closed-nature allochem percentages and their centred log-ratio (clr) coordinates were used. Both these approaches allow for distinguishing of lowstand, transgressive and highstand system tracts within the Praha Formation, which show gradual transition from crinoid-dominated facies deposited above the storm wave base to dacryoconarid-dominated facies of deep-water environment below the storm wave base. Quantitative compositional data also indicate progradative-retrogradative trends in the macrolithologically monotonous shallow-water succession and enable its stratigraphic correlation with successions from deeper-water environments. Generally, the stratigraphic trends of the clr data are more sensitive to subtle changes in allochem composition in comparison to the results based on raw data. A heterozoan-dominated allochem association in shallow-water environments of the Praha Formation supports the carbonate ramp environment assumed by previous authors.

Relative risk assessment of cruise ships biosolids disposal alternatives.

PubMed

Avellaneda, Pedro M; Englehardt, James D; Olascoaga, Josefina; Babcock, Elizabeth A; Brand, Larry; Lirman, Diego; Rogge, Wolfgang F; Solo-Gabriele, Helena; Tchobanoglous, George

2011-10-01

A relative risk assessment of biosolids disposal alternatives for cruise ships is presented in this paper. The area of study encompasses islands and marine waters of the Caribbean Sea. The objective was to evaluate relative human health and ecological risks of (a) dewatering/incineration, (b) landing the solids for disposal, considering that in some countries land-disposed solids might be discharged in the near-shore environment untreated, and (c) deep ocean disposal. Input to the Bayesian assessment consisted of professional judgment based on available literature and modeling information, data on constituent concentrations in cruise ship biosolids, and simulations of constituent concentrations in Caribbean waters assuming ocean disposal. Results indicate that human health and ecological risks associated with land disposal and shallow ocean disposal are higher than those of the deep ocean disposal and incineration. For incineration, predicted ecological impacts were lower relative to deep ocean disposal before considering potential impacts of carbon emissions. Copyright © 2011 Elsevier Ltd. All rights reserved.

Factors Influencing the Formation of Corrosive Conditions in Puget Sound and the Extreme Conditions Observed During Summer 2015 Associated with the NE Pacific Warm Anomaly (a.k.a. The Blob)

NASA Astrophysics Data System (ADS)

Alin, S. R.; Curry, B.; Newton, J.; Feely, R. A.; Sutton, A.

2016-02-01

Puget Sound is a complex glacial estuarine system that receives input from many rivers and streams, in addition to runoff from the urban and agricultural environments surrounding the southern part of the Salish Sea ecosystem. A series of glacial sills restrict estuarine circulation such that intrusions of seawater only occur episodically, resulting in long residence times in some parts of the basin. Through survey cruises and stationary time-series, we have observed the dynamic biogeochemical cycles in various sub-basins of Puget Sound since 2008. Areas of Puget Sound with restricted circulation may experience conditions of high pCO2, low pH, and low aragonite saturation state throughout the year. Historically, the highest pCO2 and lowest pH and aragonite saturation states have been observed in early fall in Hood Canal. Upwelling of dense, nutrient- and CO2-rich but oxygen-poor water along the coast provides the marine source water for Puget Sound's deep waters. We estimate that marine waters entering Puget Sound via the Strait of Juan de Fuca are now corrosive 95% of the time, representing a 26% increase in frequency since the preindustrial era. Both river inputs and intense primary production in surface waters drive remineralization in deep waters of Puget Sound basins, contributing to the formation of corrosive conditions in waters below the productive surface. In addition, we estimate that regionally enhanced atmospheric CO2 content may result in an increase in CO2 uptake in the region. In 2015 many features of the seasonal carbon cycle were accelerated relative to earlier years, as a result of the influence of the NE Pacific warm anomaly. In southern Hood Canal, the surface spring bloom began weeks earlier than usual, and in July, we saw the lowest estimated pH and aragonite saturation values in deep waters observed to date in Washington marine environments, which was about two months earlier than historical seasonal minima in pH and aragonite saturation.

Village environs as source of nitrate contamination in groundwater: a case study in basaltic geo-environment in central India.

PubMed

Reddy, D V; Nagabhushanam, P; Peters, Edward

2011-03-01

Nitrate is one of the common contaminants in the present day groundwaters resulting from increased population associated with poor sanitary conditions in the habitat area and increased agricultural activity. The hydrochemical measurements on water samples from a virgin watershed, situated in the basaltic geo-environment, have become necessary as the groundwater is the only source of drinking water for the villagers of the area. High preferential recharge conditions prevail in the area due to fractures in the solid basaltic lava flows. Instead of dilution due to fresh recharge, the post-monsoon hydrochemical concentrations in the groundwater are observed to have increased probably due to fast migration of pollutants to the aquifer through preferential recharge. As a result, the deep aquifer waters are more contaminated with hazardous nitrate than the shallow waters. Further, the village environ wells are more polluted with nitrate than the agriculture areas which could be attributed to the unhygienic sanitary conditions and livestock waste dump pits in the villages. This study suggests proper management of the sewage system and creation of suitable dump yard for the livestock and household waste to minimize the level of nitrate pollution in the well waters of village environs.

Microbial ecology of deep-water mid-Atlantic canyons

USGS Publications Warehouse

Kellogg, Christina A.

2011-01-01

The research described in this fact sheet will be conducted from 2012 to 2014 as part of the U.S. Geological Survey's DISCOVRE (DIversity, Systematics, and COnnectivity of Vulnerable Reef Ecosystems) Program. This integrated, multidisciplinary effort will be investigating a variety of topics related to unique and fragile deep-sea ecosystems from the microscopic level to the ecosystem level. One goal is to improve understanding, at the microbiological scale, of the benthic communities (including corals) that reside in and around mid-Atlantic canyon habitats and their associated environments. Specific objectives include identifying and characterizing the microbial associates of deep-sea corals, characterizing the microbial biofilms on hard substrates to better determine their role in engineering the ecosystem, and adding a microbial dimension to benthic community structure and function assessments by characterizing micro-eukaryotes, bacteria, and archaea in deep-sea sediments.

The volcano-sedimentary succession of Upper Permian in Wuli area, central Qinghai-Tibetan Plateau: Sedimentology, geochemistry and paleogeography

NASA Astrophysics Data System (ADS)

Liu, Shengqian; Jiang, Zaixing; Gao, Yi

2017-04-01

Detailed observations on cores and thin sections well documented a volcano-sedimentary succession from Well TK2, which is located in Wuli area, central Qinghai-Tibetan Plateau. The TK2 volcano-sedimentary succession reflects an active sedimentary-tectonic setting in the north margin of North Qiangtang-Chamdo terrane in the late Permian epoch. Based on the observation and recognition on lithology and mineralogy, the components of TK2 succession are mainly volcanic and volcaniclastic rocks and four main lithofacies are recognized, including massive volcanic lithofacies (LF1), pyroclastic tuff lithofacies (LF2), tuffaceous sandstone lithofacies (LF3) and mudstone lithofacies (LF4). LF1 is characterized by felsic components, massive structure and porphyrotopic structure with local flow structure, which indicates submarine intrusive domes or extrusion-fed lavas that formed by magma ascents via faults or dykes. Meanwhile, its eruption style may reflect a relative high pressure compensation level (PCL) that mainly determined by water depth, which implies a deep-water environment. LF2 is composed of volcanic lapilli or ash and featured with massive structure, parallel bedding and various deformed laminations including convolve structure, slide deformation, ball-and-pillow structure, etc.. LF2 indicates the sedimentation of initial or reworked explosive products not far away from volcano centers, reflecting the proximal accumulation of volcano eruption-fed clasts or their resedimentation as debris flows. In addition, the submarine volcano eruptions may induced earthquakes that facilitate the resedimentation of unconsolidated sediments. LF3 contains abundant pyroclastic components and is commonly massive with rip-up mudstone clasts or usually interbedded with LF4. In addition, typical flute casts, scour structures and graded beddings in thin-interbedded layers of sandstone and mudstone are commonly observed, which also represents the sedimentation of debris flows or turbidity flows in a relative deep-water environment. LF4 indicates suspension deposits of distal turbidity sediments in deeper-water setting, which is mainly tuffaceous and ordinary mudstone, commonly interbedded with thin pyroclastic layers. Geochemically, the felsic volcanic rocks belong to tholeiitic to calc-alkaline series, exhibiting characteristics of right-leaning rare earth element (REE) patterns with conspicuous Eu negative anomalies, enrichments in large ion lithophile elements (LILEs) and depletions in high field-strength elements (HFSEs), which reflect an island arc environment that corresponds to the late-Permian subduction of slabs. The TK2 volcanic-sedimentary succession reveals a submarine volcano-dominated depositional model and proves the existence of a deeper water environment, at least in a restricted zone of Wuli area. However, the traditional sedimentary and paleogeographic knowledges are mostly about coal-forming transitional facies in stable environment. Therefore, the proposing of a deep-water volcano-sedimentary model will provide a further comprehension of paleogeography in southern Qinghai at late-Permian, which will also supplement the previous cognition of stable ocean-land transitional environments and provide a new sight to the paleogeographic framework of late-Permian in North Qiangtang-Chamdo terrane.

Effect of Water Immersion on Dual-task Performance: Implications for Aquatic Therapy.

PubMed

Schaefer, Sydney Y; Louder, Talin J; Foster, Shayla; Bressel, Eadric

2016-09-01

Much is known about cardiovascular and biomechanical responses to exercise during water immersion, yet an understanding of the higher-order neural responses to water immersion is unclear. The purpose of this study was to compare cognitive and motor performance between land and water environments using a dual-task paradigm, which served as an indirect measure of cortical processing. A quasi-experimental crossover research design is used. Twenty-two healthy participants (age = 24.3 ± 5.24 years) and a single-case patient (age = 73) with mild cognitive impairment performed a cognitive (auditory vigilance) and motor (standing balance) task separately (single-task condition) and simultaneously (dual-task condition) on land and in chest-deep water. Listening errors from the auditory vigilance task and centre of pressure (CoP) area for the balance task measured cognitive and motor performance, respectively. Listening errors for the single-task and dual-task conditions were 42% and 45% lower for the water than land condition, respectively (effect size [ES] = 0.38 and 0.55). CoP area for the single-task and dual-task conditions, however, were 115% and 164% lower on land than in water, respectively, and were lower (≈8-33%) when balancing concurrently with the auditory vigilance task compared with balancing alone, regardless of environment (ES = 0.23-1.7). This trend was consistent for the single-case patient. Participants tended to make fewer 'cognitive' errors while immersed chest-deep in water than on land. These same participants also tended to display less postural sway under dual-task conditions, but more in water than on land. Copyright © 2015 John Wiley & Sons, Ltd. Copyright © 2015 John Wiley & Sons, Ltd.

[Microbes on the edge of global biosphere].

PubMed

Naganuma, T

2000-12-01

The search for life on the edge of global biosphere is a frontier to bridge conventional bio/ecology and exo/astrobiology. This communication reviews the foci of microbiological studies on the inhabitants of the selected "edges", i.e., deep-sea, deep subsurface and Antarctic habitats. The deep-sea is characterized as the no-light (non-photosynthetic) habitat, and the primary production is mostly due to the chemosynthetic autotrophy at the hydrothermal vents and methane-rich seeps. Formation of the chemosynthesis-dependent animal communities in the deep leads to the idea that such communities may be found in "ocean" of the Jovian satellite, Europa. The oxygen minimal layer (OML) in mid-water provides another field of deep-sea research. Modern OML is a relatively thin layer, found between the water depth of 200 and 1000 m, but was much thicker during the periods of oceanic anoxia events (OAEs) in the past. The history of oceanic biosphere is regarded as the cycle of OAE and non-OAE periods, and the remnants of the past OAEs may be seen in the modem OML. Anoxic (no-O2) condition is also characteristic of deep subsurface biosphere. Microorganisms in deep subsurface biosphere exploit every available oxidant, or terminal electron acceptor (TEA), for anaerobic respiration. Sulfate, nitrate, iron (III) and CO2 are the representative TEAs in the deep subsurface. Subsurface of hydrothermal vents, or sub-vent biosphere, may house brine (high salt) habitats and halophilic microorganisms. Some sub-vent halophiles were phylogenetically closely similar to the ones found in the Antarctic habitats which are extremely dry by the liophilizing climate. Below the 3000-4000 m-thick glacier on Antarctica, there have been >70 lakes with liquid water located. One of such sub-glacial lakes, Lake Vostok, has been a target of "life in extreme environments" and is about to be drill-penetrated for microbiological studies. These 'microbiological platforms' will provide new knowledge about the diversity and potential of the Earth's life and facilitate the capability of astrobiologial exploration.

Plant Water Uptake in Drying Soils1

PubMed Central

Lobet, Guillaume; Couvreur, Valentin; Meunier, Félicien; Javaux, Mathieu; Draye, Xavier

2014-01-01

Over the last decade, investigations on root water uptake have evolved toward a deeper integration of the soil and roots compartment properties, with the goal of improving our understanding of water acquisition from drying soils. This evolution parallels the increasing attention of agronomists to suboptimal crop production environments. Recent results have led to the description of root system architectures that might contribute to deep-water extraction or to water-saving strategies. In addition, the manipulation of root hydraulic properties would provide further opportunities to improve water uptake. However, modeling studies highlight the role of soil hydraulics in the control of water uptake in drying soil and call for integrative soil-plant system approaches. PMID:24515834

Computed narrow-band azimuthal time-reversing array retrofocusing in shallow water.

PubMed

Dungan, M R; Dowling, D R

2001-10-01

The process of acoustic time reversal sends sound waves back to their point of origin in reciprocal acoustic environments even when the acoustic environment is unknown. The properties of the time-reversed field commonly depend on the frequency of the original signal, the characteristics of the acoustic environment, and the configuration of the time-reversing transducer array (TRA). In particular, vertical TRAs are predicted to produce horizontally confined foci in environments containing random volume refraction. This article validates and extends this prediction to shallow water environments via monochromatic Monte Carlo propagation simulations (based on parabolic equation computations using RAM). The computational results determine the azimuthal extent of a TRA's retrofocus in shallow-water sound channels either having random bottom roughness or containing random internal-wave-induced sound speed fluctuations. In both cases, randomness in the environment may reduce the predicted azimuthal angular width of the vertical TRA retrofocus to as little as several degrees (compared to 360 degrees for uniform environments) for source-array ranges from 5 to 20 km at frequencies from 500 Hz to 2 kHz. For both types of randomness, power law scalings are found to collapse the calculated azimuthal retrofocus widths for shallow sources over a variety of acoustic frequencies, source-array ranges, water column depths, and random fluctuation amplitudes and correlation scales. Comparisons are made between retrofocusing on shallow and deep sources, and in strongly and mildly absorbing environments.

IODP Expedition 337: Deep Coalbed Biosphere off Shimokita - Microbial processes and hydrocarbon system associated with deeply buried coalbed in the ocean

NASA Astrophysics Data System (ADS)

Inagaki, Fumio; Hinrichs, Kai-Uwe; Kubo, Yusuke; IODP Expedition 337 Scientists

2016-06-01

The Integrated Ocean Drilling Program (IODP) Expedition 337 was the first expedition dedicated to subseafloor microbiology that used riser-drilling technology with the drilling vessel Chikyu. The drilling Site C0020 is located in a forearc basin formed by the subduction of the Pacific Plate off the Shimokita Peninsula, Japan, at a water depth of 1180 m. Primary scientific objectives during Expedition 337 were to study the relationship between the deep microbial biosphere and a series of ˜ 2 km deep subseafloor coalbeds and to explore the limits of life in the deepest horizons ever probed by scientific ocean drilling. To address these scientific objectives, we penetrated a 2.466 km deep sedimentary sequence with a series of lignite layers buried around 2 km below the seafloor. The cored sediments, as well as cuttings and logging data, showed a record of dynamically changing depositional environments in the former forearc basin off the Shimokita Peninsula during the late Oligocene and Miocene, ranging from warm-temperate coastal backswamps to a cool water continental shelf. The occurrence of small microbial populations and their methanogenic activity were confirmed down to the bottom of the hole by microbiological and biogeochemical analyses. The factors controlling the size and viability of ultra-deep microbial communities in those warm sedimentary habitats could be the increase in demand of energy and water expended on the enzymatic repair of biomolecules as a function of the burial depth. Expedition 337 provided a test ground for the use of riser-drilling technology to address geobiological and biogeochemical objectives and was therefore a crucial step toward the next phase of deep scientific ocean drilling.

First-Principles Molecular Dynamics Study of a Deep Eutectic Solvent: Choline Chloride/Urea and Its Mixture with Water

DOE PAGES

Fetisov, Evgenii O.; Harwood, David B.; Kuo, I-Feng William; ...

2017-12-07

First-principles molecular dynamics simulations in the canonical ensemble at temperatures of 333 and 363 K and at the corresponding experimental densities are carried out to investigate the behavior of the 1:2 choline chloride/urea (reline) deep eutectic solvent and its equimolar mixture with water. Analysis of atom–atom radial and spatial distribution functions and of the H-bond network reveals the microheterogeneous structure of these complex liquid mixtures. In neat reline, the structure is governed by strong H-bonds of the trans- and cis-H atoms of urea to the chloride ion. In hydrous reline, water competes for the anions, and the H atoms ofmore » urea have similar propensities to bond to the chloride ions and the O atoms of urea and water. Finally, the vibrational spectra exhibit relatively broad peaks reflecting the heterogeneity of the environment. Although the 100 ps trajectories allow only for a qualitative assessment of transport properties, the simulations indicate that water is more mobile than the other species and its addition also fosters faster motion of urea.« less

STS-52 MS Jemison, in LES/LEH, during JSC WETF bailout exercise

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Mission Specialist (MS) Tamara E. Jernigan, wearing launch and entry suit (LES) and launch and entry helmet (LEH), listens to a briefing about water landings during an emergency egress (bailout) training exercise in JSC's Weightless Environment Training Facility (WETF) Bldg 29 pool. Jernigan waits her turn to be dropped into the WETF's 25-ft deep pool which will simulate the ocean during of her water landing.

Organic-rich sediments in ventilated deep-sea environments: Relationship to climate, sea level, and trophic changes

NASA Astrophysics Data System (ADS)

Bertrand, P.; Pedersen, T. F.; Schneider, R.; Shimmield, G.; Lallier-Verges, E.; Disnar, J. R.; Massias, D.; Villanueva, J.; Tribovillard, N.; Huc, A. Y.; Giraud, X.; Pierre, C.; VéNec-Peyré, M.-T.

2003-02-01

Sediments on the Namibian Margin in the SE Atlantic between water depths of ˜1000 and ˜3600 m are highly enriched in hydrocarbon-prone organic matter. Such sedimentation has occurred for more than 2 million years and is geographically distributed over hundreds of kilometers along the margin, so that the sediments of this region contain a huge concentrated stock of organic carbon. It is shown here that most of the variability in organic content is due to relative dilution by buried carbonates. This reflects both export productivity and diagenetic dissolution, not differences in either water column or bottom water anoxia and related enhanced preservation of organic matter. These observations offer a new mechanism for the formation of potential source rocks in a well-ventilated open ocean, in this case the South Atlantic. The organic richness is discussed in terms of a suite of probable controls including local wind-driven productivity (upwelling), trophic conditions, transfer efficiency, diagenetic processes, and climate-related sea level and deep circulation. The probability of past occurrences of such organic-rich facies in equivalent oceanographic settings at the edge of large oceanic basins should be carefully considered in deep offshore exploration.

A Miniaturized, Programmable Deep-Brain Stimulator for Group-Housing and Water Maze Use

PubMed Central

Pinnell, Richard C.; Pereira de Vasconcelos, Anne; Cassel, Jean C.; Hofmann, Ulrich G.

2018-01-01

Pre-clinical deep-brain stimulation (DBS) research has observed a growing interest in the use of portable stimulation devices that can be carried by animals. Not only can such devices overcome many issues inherent with a cable tether, such as twisting or snagging, they can also be utilized in a greater variety of arenas, including enclosed or large mazes. However, these devices are not inherently designed for water-maze environments, and their use has been restricted to individually-housed rats in order to avoid damage from various social activities such as grooming, playing, or fighting. By taking advantage of 3D-printing techniques, this study demonstrates an ultra-small portable stimulator with an environmentally-protective device housing, that is suitable for both social-housing and water-maze environments. The miniature device offers 2 channels of charge-balanced biphasic pulses with a high compliance voltage (12 V), a magnetic switch, and a diverse range of programmable stimulus parameters and pulse modes. The device's capabilities have been verified in both chronic pair-housing and water-maze experiments that asses the effects of nucleus reuniens DBS. Theta-burst stimulation delivered during a reference-memory water-maze task (but not before) had induced performance deficits during both the acquisition and probe trials of a reference memory task. The results highlight a successful application of 3D-printing for expanding on the range of measurement modalities capable in DBS research. PMID:29706862

Water demand for electricity in deep decarbonisation scenarios: a multi-model assessment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mouratiadou, I.; Bevione, M.; Bijl, D. L.

This study assesses the effects of deep electricity decarbonisation and shifts in the choice of power plant cooling technologies on global electricity water demand, using a suite of five integrated assessment models. We find that electricity sector decarbonisation results in co-benefits for water resources primarily due to the phase-out of water-intensive coal-based thermoelectric power generation, although these co-benefits vary substantially across decarbonisation scenarios. Wind and solar photovoltaic power represent a win-win option for both climate and water resources, but further expansion of nuclear or fossil- and biomass-fuelled power plants with carbon capture and storage may result in increased pressures onmore » the water environment. Further to these results, the paper provides insights on the most crucial factors of uncertainty with regards to future estimates of water demand. These estimates varied substantially across models in scenarios where the effects of decarbonisation on the electricity mix were less clear-cut. Future thermal and water efficiency improvements of power generation technologies and demand-side energy efficiency improvements were also identified to be important factors of uncertainty. We conclude that in order to ensure positive effects of decarbonisation on water resources, climate policy should be combined with technology-specific energy and/or water policies.« less

Feeding a subsurface biosphere: radiolysis and abiogenic energy sources

NASA Astrophysics Data System (ADS)

Onstott, T.

Noble gas analyses of ground water collected from the deep, fractured, basaltic andesite and quartzite Archean strata in South Africa suggest subsurface residence times ranging from tens to hundreds of millions of years. Hydraulically isolated compartments of highly saline water contain hundreds of μM concentrations of gas comprised primarily of C1-4 hydrocarbons, H2 and He, with minor Ar and N .2 Carbon and hydrogen isotopic analyses of the hydrocarbons suggest an abiogenic origin com atible with surface catalysed reductive assimilation (i.e. Fischer-Tropschp synthesis). H2 and He data suggest that the H2 is generated by subsurface radiolysis of water. One sample of a saline, isolated water/gas pocket agrees exactly with that predicted by radioactive decay of U, Th, K in the host rock and indicates a subsurface H2 production rate of 0.1 to 1 nM/yr. Other samples yielded less H2 than predicted and require a sink for this H2 . Possible sinks include microbial H2 oxidation and abiotic formation of hydrocarbons at rates slightly less than the H2 production rate. Highly diffusive H2 is essential for life in deep subsurface environments where only trace amounts of organic carbon exist. Lithoautotrophic microbes can acquire energy from the redox reactions involving H2 with other electron acceptors (Fe3 +, SO4 2 - or CO2 ), to synthesis organic carbon and can be fully independent of solar-driven photosynthesis. The microbial abundance in many of these ground water samples, however, is below our detection limit (<5000 cells/ml). This contrasts with shallow sedimentary aquifers where H2 levels of tens of nM are regulated by the coexistence of autotrophs/lithotrophs and heterotrophs for maximum efficiency of H2 utilization. The excessive H2 found in deep crustal environments implies that these microbial ecosystems are electron-acceptor and or substrate limited. The oxidants generated by water radiolysis interact with the reduced solid phases in the rock matrix, e.g. pyrite, producing potential electron acceptors, e.g. Fe3 +, that may be readily available for consumption by microbial communities than H . Nitrogen doesn't appear to be2 limited, because ammonia concentrations range upwards to tens of μM, but its origin remains a mystery. The unused H2 , CH4 and He continue to migrate upward to shallow aquifers. Microbial H2 oxidation may dominate over Fischer-Tropsch reactions in crustal environments where formation temperatures are <120o C; and vice versa for deeper crustal environments. This H2 cycle should be present on extraterrestrial bodies, producing potential chemical energy and crustal scale diffusive fluxes from the interaction subsurface ice/water and radiogenic decay.

Virtual dissection and lifestyle of a 165 -million-year-old female polychelidan lobster.

PubMed

Jauvion, Clément; Audo, Denis; Charbonnier, Sylvain; Vannier, Jean

2016-03-01

Polychelidan lobsters are fascinating crustaceans that were known as fossils before being discovered in the deep-sea. They differ from other crustaceans by having four to five pairs of claws. Although recent palaeontological studies have clarified the systematics and phylogeny of the group, the biology of extant polychelidans and--first of all--their anatomy are poorly documented. Numerous aspects of the evolutionary history of the group remain obscure, in particular, how and when polychelidans colonized the deep-sea and became restricted to it. Surprisingly, the biology of extant polychelidans and the anatomy of all species, fossil and recent, are poorly documented. Here, X-ray microtomography (XTM), applied to an exceptionally well-preserved specimen from the La Voulte Lagerstätte, reveals for the first time vital aspects of the external and internal morphology of Voulteryon parvulus (Eryonidae), a 165-million-year-old polychelidan: 1) its mouthparts (maxillae and maxillipeds), 2) its digestive tract and 3) its reproductive organs. Comparisons with dissected specimens clearly identify this specimen as a female with mature ovaries. This set of new information offers new insights into the feeding and reproductive habits of Mesozoic polychelidans. Contrasting with other Jurassic polychelidans that lived in shallow-water environments, V. parvulus spawned in, and probably inhabited, relatively deep-water environments, as do the survivors of the group. Copyright © 2015 Elsevier Ltd. All rights reserved.

Deep ice and salty oceans of icy worlds, how high pressures influence their thermodynamics and provide constrains on extraterrestrial habitability

NASA Astrophysics Data System (ADS)

Journaux, B.; Brown, J. M.; Bollengier, O.; Abramson, E.

2017-12-01

As in Earth arctic and Antarctic regions, suspected extraterrestrial deep oceans in icy worlds (i.e. icy moons and water-rich exoplanets) chemistry and thermodynamic state will strongly depend on their equilibrium with H2O ice and present solutes. Na-Mg-Cl-SO4 salt species are currently the main suspected ionic solutes to be present in deep oceans based on remote sensing, magnetic field measurements, cryovolcanism ice grains chemical analysis and chondritic material aqueous alteration chemical models. Unlike on our planet, deep extraterrestrial ocean might also be interacting at depth with high pressure ices (e.g. III, V, VI, VI, X) which have different behavior compared to ice Ih. Unfortunately, the pressures and temperatures inside these hydrospheres differ significantly from the one found in Earth aqueous environments, so most of our current thermodynamic databases do not cover the range of conditions relevant for modeling realistically large icy worlds interiors. Recent experimental results have shown that the presence of solutes, and more particularly salts, in equilibrium with high pressure ices have large effects on the stability, buoyancy and chemistry of all the phases present at these extreme conditions. High pressure in-situ measurements using diamond anvil cell apparatus were operated both at the University of washington and at the European Synchrotron Radiation Facility on aqueous systems phase diagrams with Na-Mg-Cl-SO4 species, salt incorporation in high pressure ices and density inversions between the solid and the fluids. These results suggest a more complex picture of the interior structure, dynamic and chemical evolution of large icy worlds hydrospheres when solutes are taken into account, compared to current models mainly using pure water. Based on our in-situ experimental measurements, we propose the existence of new liquid environments at greater depths and the possibility of solid state transport of solute through the high pressure ices(s) layers suggesting that large icy worlds like Enceladus, Titan or water-rich exoplanets could have habitable deep oceans, even when high pressure ices are present.

Deflection of natural oil droplets through the water column in deep-water environments: The case of the Lower Congo Basin

NASA Astrophysics Data System (ADS)

Jatiault, Romain; Dhont, Damien; Loncke, Lies; de Madron, Xavier Durrieu; Dubucq, Dominique; Channelliere, Claire; Bourrin, François

2018-06-01

Numerous recurrent seep sites were identified in the deep-water environment of the Lower Congo Basin from the analysis of an extensive dataset of satellite-based synthetic-aperture radar images. The integration of current data was used to link natural oil slicks with active seep-related seafloor features. Acoustic Doppler current profiler measurements across the water column provided an efficient means to evaluate the horizontal deflection of oil droplets rising through the water column. Eulerian propagation model based on a range of potential ascension velocities helped to approximate the path for rising oil plume through the water column using two complementary methods. The first method consisted in simulating the reversed trajectory of oil droplets between sea-surface oil slick locations observed during current measurements and seep-related seafloor features while considering a range of ascension velocities. The second method compared the spatial spreading of natural oil slicks from 21 years of satellite monitoring observations for water depths ranging from 1200 to 2700 m against the modeled deflections during the current measurement period. The mapped oil slick origins are restricted to a 2.5 km radius circle from associated seep-related seafloor features. The two methods converge towards a range of ascension velocities for oil droplets through the water column, estimated between 3 and 8 cm s-1. The low deflection values validate that the sub-vertical projection of the average surface area of oil slicks at the sea surface can be used to identify the origin of expelled hydrocarbon from the seafloor, which expresses as specific seafloor disturbances (i.e. pockmarks or mounds) known to expel fluids.

Indications for the past redox environments in deep groundwaters from the isotopic composition of carbon and oxygen in fracture calcite, Olkiluoto, SW Finland.

PubMed

Sahlstedt, Elina; Karhu, Juha A; Pitkanen, Petteri

2010-09-01

In paleohydrogeological studies, the geochemical and isotope geochemical composition of fracture calcites can be utilised to gain information about the evolution of the composition of deep groundwaters in crystalline bedrock. The aim of our study was to investigate the latest hydrogeochemical evolution of groundwaters in the crystalline bedrock at Olkiluoto, which is the planned site for deep geological disposal of spent nuclear fuel. Samples were collected from drill cores intercepting water-conducting fractures at the upper ~500 m of the bedrock. The latest fracture calcite generations were identified using optical microscopy and electron microprobe. They occur as thin ~10-200 μm crusts or small euhedral crystals on open fracture surfaces. These latest calcite fillings were carefully sampled and analysed for the isotopic composition on carbon and oxygen. In addition, fluid inclusion homogenisation temperatures were determined on selected calcite samples. Fluid inclusion data indicated a low temperature of formation for the latest fracture calcite fillings. The δ(18)O values of calcite in these fracture fillings vary only slightly, from-7.3 to-11.5 ‰ (Vienna Pee Dee Belemnite, VPDB), whereas the δ(13)C values fluctuate widely, from-30 to+31 ‰ (VPDB). The δ(13)C values of latest calcite fillings show a systematic pattern with depth, with high and variable δ(13)C values below 50 m. The high δ(13)C values indicate active methanogenesis during the formation of the latest calcite fillings. In contrast, the present-day methanic redox environment is restricted to depths below 200-300 m. It is possible that the shift in the redox environment at Olkiluoto has occurred during infiltration of SO2-(4)-rich marine waters, the latest of such events being the infiltration of brackish waters of the Littorina Sea stage of the Baltic Sea at ~8000-3000 BP.

Simulation and analysis of soil-water conditions in the Great Plains and adjacent areas, central United States, 1951-80

USGS Publications Warehouse

Dugan, Jack T.; Zelt, Ronald B.

2000-01-01

Ground-water recharge and consumptive-irrigation requirements in the Great Plains and adjacent areas largely depend upon an environment extrinsic to the ground-water system. This extrinsic environment, which includes climate, soils, and vegetation, determines the water demands of evapotranspiration, the availability of soil water to meet these demands, and the quantity of soil water remaining for potential ground-water recharge after these demands are met. The geographic extent of the Great Plains contributes to large regional differences among all elements composing the extrinsic environment, particularly the climatic factors. A soil-water simulation program, SWASP, which synthesizes selected climatic, soil, and vegetation factors, was used to simulate the regional soil-water conditions during 1951-80. The output from SWASP consists of several soil-water characteristics, including surface runoff, infiltration, consumptive water requirements, actual evapotranspiration, potential recharge or deep percolation under various conditions, consumptive irrigation requirements, and net fluxes from the ground-water system under irrigated conditions. Simulation results indicate that regional patterns of potential recharge, consumptive irrigation requirements, and net fluxes from the ground-water system under irrigated conditions are largely determined by evapotranspiration and precipitation. The local effects of soils and vegetation on potential recharge cause potential recharge to vary by more than 50 percent in some areas having similar climatic conditions.

Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing.

PubMed

Qian, Pei-Yuan; Wang, Yong; Lee, On On; Lau, Stanley C K; Yang, Jiangke; Lafi, Feras F; Al-Suwailem, Abdulaziz; Wong, Tim Y H

2011-03-01

The ecosystems of the Red Sea are among the least-explored microbial habitats in the marine environment. In this study, we investigated the microbial communities in the water column overlying the Atlantis II Deep and Discovery Deep in the Red Sea. Taxonomic classification of pyrosequencing reads of the 16S rRNA gene amplicons showed vertical stratification of microbial diversity from the surface water to 1500 m below the surface. Significant differences in both bacterial and archaeal diversity were observed in the upper (20 [corrected] and 50 m) and deeper layers (200 and 1500 m). There were no obvious differences in community structure at the same depth for the two sampling stations. The bacterial community in the upper layer was dominated by Cyanobacteria whereas the deeper layer harbored a large proportion of Proteobacteria. Among Archaea, Euryarchaeota, especially Halobacteriales, were dominant in the upper layer but diminished drastically in the deeper layer where Desulfurococcales belonging to Crenarchaeota became the dominant group. The results of our study indicate that the microbial communities sampled in this study are different from those identified in water column in other parts of the world. The depth-wise compositional variation in the microbial communities is attributable to their adaptations to the various environments in the Red Sea.

Evaluation of Environmentally Assisted Cracking of Armour Wires in Flexible Pipes, Power Cables and Umbilicals

NASA Astrophysics Data System (ADS)

Zhang, Zhiying

Environmentally assisted cracking (EAC) of armour wires in flexible pipes, power cables and umbilicals is a major concern with the development of oil and gas fields and wind farms in harsh environments. Hydrogen induced cracking (HIC) or hydrogen embrittlement (HE) of steel armour wires used in deep-water and ultra-deep-water has been evaluated. Simulated tests have been carried out in simulated sea water, under conditions where the susceptibility is the highest, i.e. at room temperature, at the maximum negative cathodic potential and at the maximum stress level expected in service for 150 hours. Examinations of the tested specimens have not revealed cracking or blistering, and measurement of hydrogen content has confirmed hydrogen charging. In addition, sulphide stress cracking (SSC) and chloride stress cracking (CSC) of nickel-based alloy armour wires used in harsh down-hole environments has been evaluated. Simulated tests have been carried out in simulated solution containing high concentration of chloride, with high hydrogen sulphide partial pressure, at high stress level and at 120 °C for 720 hours. Examinations of the tested specimens have not revealed cracking or blistering. Subsequent tensile tests of the tested specimens at ambient pressure and temperature have revealed properties similar to the as-received specimens.

Clay with Desiccation Cracks is an Advection Dominated Environment

NASA Astrophysics Data System (ADS)

Baram, S.; Kurtzman, D.; Sher, Y.; Ronen, Z.; Dahan, O.

2012-04-01

Heavy clay sediments are regarded "safe" from the hydrological point of view due to their low hydraulic conductivities. However, the formation of desiccation cracks in dispersive clays may dramatically change their bulk hydraulic properties. The impact of desiccation cracks on water percolation, dissolved salts and contaminants transport and redox related reactions (microbial ammonium oxidation and denitrification) were investigated in 6 -12 m clay layer near a diary farm waste lagoon. The study implemented unique vadose-zone monitoring systems that enable in-situ measurements of the temporal variation of the sediment's water content along with frequent sampling of the sediment's pore water along the entire vadose zone (> 30 m). Results from four years of continuous measurements showed quick rises in sediment water content following rain events and temporal wastewater overflows. The percolation pattern indicated dominance of preferential flow through a desiccation-cracks network crossing the entire clay sediment layer. High water-propagation velocities (0.4 - 23.6 m h-1) were observed, indicating that the desiccation-crack network remains open and serves as a preferential flow pathway year-round, even at high sediment water content (~0.50 m3 m-3). The rapid percolation bypassed the most bio-geo-active parts of the soil, transporting even highly sorptive contaminants (testosterone and estrogen) in to the deep sections of the vadose zone, accelerating the underlying groundwater contamination. The ammonium and nitrate concentrations in the vadose zone and the high number of nitrifying and denitrifying bacteria (~108 gene copies gdry-sediemt-1, each) found in the sediment indicated that the entire vadose zone is aerated even at high water content conditions (~0.55 m3 m-3). The dissolved salts concentration in the pore-water and the δ2H-H2O and δ18O-H2O values of the pore-water substantially increased with depth (becoming less depleted) in the clay sediment, indicating deep soil evaporation. Daily fluctuation of the air temperature in the desiccation cracks supported thermally induced air convection within the cracks void and could explain the deep soil salinization process. Combination of all the abovementioned observations demonstrated that the formation of desiccation cracks network in dispersive clay sediments generates a bulk advection dominated environment for both air and water flow, and that the reference to clay sediments as "hydrologically safe" should to be reconsidered.

Hydrogeochemistry of groundwaters in and below the base of thick permafrost at Lupin, Nunavut, Canada

NASA Astrophysics Data System (ADS)

Stotler, Randy L.; Frape, Shaun K.; Ruskeeniemi, Timo; Ahonen, Lasse; Onstott, Tullis C.; Hobbs, Monique Y.

2009-06-01

SummaryShield fluids are commonly understood to evolve through water-rock interaction. However, fluids may also concentrate during ice formation. Very little is currently known about groundwater conditions beneath thick permafrost in crystalline environments. This paper evaluates three possible Shield fluid evolution pathways at a crystalline Shield location currently under 500+ meters of permafrost, including surfical cryogenic concentration of seawater, in situ cryogenic concentration and water-rock interaction. A primary goal of this study was to further scientific understanding of permafrost and its role in influencing deep flow system evolution, fluid movement and chemical evolution of waters in crystalline rocks. Precipitation, surface, permafrost and subpermafrost water samples were collected, as well as dissolved and free gas samples, fracture fillings and matrix fluid samples to characterize the site. Investigations of groundwater conditions beneath thick permafrost provides valuable information which can be applied to safety assessment of deep, underground nuclear waste repositories, effects of long-term mining in permafrost areas and understanding analogues to potential life-bearing zones on Mars. The study was conducted in the Lupin gold mine in Nunavut, Canada, located within the zone of continuous permafrost. Through-taliks beneath large lakes in the area provided potential hydraulic connections through the permafrost. Na-Cl and Na-Cl-SO 4 type permafrost waters were contaminated by mining activities, affecting the chloride and nitrate concentrations. High nitrate concentrations (423-2630 mg L -1) were attributed to remnants of blasting. High sulfate concentrations in the permafrost (578-5000 mg L -1) were attributed to naturally occurring and mining enhanced sulfide oxidation. Mine dewatering created an artificial hydraulic gradient, resulting in methane hydrate dissociation at depth. Less contaminated basal waters had medium sulfate concentrations and were Ca-Na dominated, similar to deeper subpermafrost waters. Subpermafrost waters had a wide range of salinities (2.6-40 g L -1). It was unclear from this investigation what impact talik waters would have on deep groundwaters in undisturbed environments. In situ cryogenic concentration due to ice and methane hydrate formation may have concentrated the remaining fluids, however there was no evidence that infiltration of cryogenically concentrated seawater occurred since the last glacial maximum. Matrix waters were dilute and unable to affect groundwater salinity. Fracture infillings were scarce, but calcite fluid inclusion microthermometry indicated a large range in salinities, potentially an additional source of salinity to the system.

Mind the seafloor

NASA Astrophysics Data System (ADS)

Boetius, Antje; Haeckel, Matthias

2018-01-01

As human use of rare metals has diversified and risen with global development, metal ore deposits from the deep ocean floor are increasingly seen as an attractive future resource. Japan recently completed the first successful test for zinc extraction from the deep seabed, and the number of seafloor exploration licenses filed at the International Seabed Authority (ISA) has tripled in the past 5 years. Seafloor-mining equipment is being tested, and industrial-scale production in national waters could start in a few years. We call for integrated scientific studies of global metal resources, the fluxes and fates of metal uses, and the ecological footprints of mining on land and in the sea, to critically assess the risks of deep-sea mining and the chances for alternative technologies. Given the increasing scientific evidence for long-lasting impacts of mining on the abyssal environment, precautionary regulations for commercial deep-sea mining are essential to protect marine ecosystems and their biodiversity.

Unique deep-water ecosystems off the southeastern United States

USGS Publications Warehouse

Ross, Steve W.

2007-01-01

If nothing else, research in deep-sea environments teaches us how little we know about such important and productive habitats. The relatively recent discovery of hydrothermal-vent and cold-seep ecosystems illustrates this paucity of knowledge, and the subsequent explosion of research on these systems is a good example of the impact such concentrated efforts can have on marine sciences (see the March 2007 special issue of Oceanography on InterRidge, and Levin et al., 2007). The recent surge of interest in deep-sea corals is another example of how focused research on a particular subject can result in new perspectives on continental slope biotopes. Although deep-sea corals have been known for over 200 years, they were viewed as somewhat of a novelty, and research on them was sporadic, typically geologic, and usually only documented their occurrences (e.g., Stetson et al., 1962; Neumann et al., 1977; Paull et al., 2000).

Deserts on the sea floor: Edward Forbes and his azoic hypothesis for a lifeless deep ocean.

PubMed

Anderson, Thomas R; Rice, Tony

2006-12-01

While dredging in the Aegean Sea during the mid-19th century, Manxman Edward Forbes noticed that plants and animals became progressively more impoverished the greater the depth they were from the surface of the water. By extrapolation Forbes proposed his now infamous azoic hypothesis, namely that life would be extinguished altogether in the murky depths of the deep ocean. The whole idea seemed so entirely logical given the enormous pressure, cold and eternal darkness of this apparently uninhabitable environment. Yet we now know that the sea floor is teeming with life. Curiously, it took 25 years for the azoic hypothesis to fall from grace. This was despite the presence of ample contrary evidence, including starfishes, worms and other organisms that seemingly originated from the deep seabed. This is a tale of scientists ignoring observations that ran counter to their deep-seated, yet entirely erroneous, beliefs.

Precision-cut liver slices to investigate responsiveness of deep-sea fish to contaminants at high pressure.

PubMed

Lemaire, Benjamin; Debier, Cathy; Calderon, Pedro Buc; Thomé, Jean Pierre; Stegeman, John; Mork, Jarle; Rees, Jean François

2012-09-18

While deep-sea fish accumulate high levels of persistent organic pollutants (POPs), the toxicity associated with this contamination remains unknown. Indeed, the recurrent collection of moribund individuals precludes experimental studies to investigate POP effects in this fauna. We show that precision-cut liver slices (PCLS), an in vitro tool commonly used in human and rodent toxicology, can overcome such limitation. This technology was applied to individuals of the deep-sea grenadier Coryphaenoides rupestris directly upon retrieval from 530-m depth in Trondheimsfjord (Norway). PCLS remained viable and functional for 15 h when maintained in an appropriate culture media at 4 °C. This allowed experimental exposure of liver slices to the model POP 3-methylcholanthrene (3-MC; 25 μM) at levels of hydrostatic pressure mimicking shallow (0.1 megapascal or MPa) and deep-sea (5-15 MPa; representative of 500-1500 m depth) environments. As in shallow water fish, 3-MC induced the transcription of the detoxification enzyme cytochrome P4501A (CYP1A; a biomarker of exposure to POPs). This induction was diminished at elevated pressure, suggesting a limited responsiveness of C. rupestris toward POPs in its native environment. This very first in vitro toxicological investigation on a deep-sea fish opens the route for understanding pollutants effects in this highly exposed fauna.

Hybrid female mate choice as a species isolating mechanism: environment matters.

PubMed

Schmidt, E M; Pfennig, K S

2016-04-01

A fundamental goal of biology is to understand how new species arise and are maintained. Female mate choice is potentially critical to the speciation process: mate choice can prevent hybridization and thereby generate reproductive isolation between potentially interbreeding groups. Yet, in systems where hybridization occurs, mate choice by hybrid females might also play a key role in reproductive isolation by affecting hybrid fitness and contributing to patterns of gene flow between species. We evaluated whether hybrid mate choice behaviour could serve as such an isolating mechanism using spadefoot toad hybrids of Spea multiplicata and Spea bombifrons. We assessed the mate preferences of female hybrid spadefoot toads for sterile hybrid males vs. pure-species males in two alternative habitat types in which spadefoots breed: deep or shallow water. We found that, in deep water, hybrid females preferred the calls of sterile hybrid males to those of S. multiplicata males. Thus, maladaptive hybrid mate preferences could serve as an isolating mechanism. However, in shallow water, the preference for hybrid male calls was not expressed. Moreover, hybrid females did not prefer hybrid calls to those of S. bombifrons in either environment. Because hybrid female mate choice was context-dependent, its efficacy as a reproductive isolating mechanism will depend on both the environment in which females choose their mates as well as the relative frequencies of males in a given population. Thus, reproductive isolation between species, as well as habitat specific patterns of gene flow between species, might depend critically on the nature of hybrid mate preferences and the way in which they vary across environments. © 2015 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2015 European Society For Evolutionary Biology.

A Miniature Fiber-Optic Sensor for High-Resolution and High-Speed Temperature Sensing in Ocean Environment

DTIC Science & Technology

2015-11-05

the SMF is superior when it comes to remote sensing in far and deep ocean. As an initial test , the real-time temperature structure within the water...4 ℃. The high resolution guarantees the visualization of subtle variation in the local water. To test the response time of the proposed sensor, the... Honey , "Optical trubulence in the sea," in Underwater Photo-optical Instrumentation Applications SPIE, 49-55 (1972). [6] J. D. Nash, D. R. Caldwell, M

STS-32 MS Dunbar wearing LES prepares for WETF water egress training

NASA Technical Reports Server (NTRS)

1989-01-01

STS-32 Mission Specialist (MS) Bonnie J. Dunbar, wearing a launch and entry suit (LES), orange parachute harness and life vest, is briefed on emergency egress procedures in JSC's Weightless Environment Training Facility (WETF) Bldg 29. During the exercises the crew practiced the procedures to follow in the event of an emergency aboard the Space Shuttle and familiarized themselves with post-Challenger pole system of emergency egress. The crewmembers will simulate parachuting into water by using the WETF's nearby 25 ft deep pool.

Autonomous gliders reveal features of the water column associated with foraging by adelie penguins.

PubMed

Kahl, L Alex; Schofield, Oscar; Fraser, William R

2010-12-01

Despite their strong dependence on the pelagic environment, seabirds and other top predators in polar marine ecosystems are generally studied during their reproductive phases in terrestrial environments. As a result, a significant portion of their life history is understudied which in turn has led to limited understanding. Recent advances in autonomous underwater vehicle (AUV) technologies have allowed satellite-tagged Adélie penguins to guide AUV surveys of the marine environment at the Palmer Long-Term Ecological Research (LTER) site on the western Antarctic Peninsula. Near real-time data sent via Iridium satellites from the AUVs to a centralized control center thousands of miles away allowed scientists to adapt AUV sampling strategies to meet the changing conditions of the subsurface. Such AUV data revealed the water masses and fine-scale features associated with Adélie penguin foraging trips. During this study, the maximum concentration of chlorophyll was between 30 and 50 m deep. Encompassing this peak in the chlorophyll concentration, within the water-column, was a mixture of nutrient-laden Upper Circumpolar Deep (UCDW) and western Antarctic Peninsula winter water (WW). Together, data from the AUV survey and penguin dives reveal that 54% of foraging by Adélie penguins occurs immediately below the chlorophyll maximum. These data demonstrate how bringing together emerging technologies, such as AUVs, with established methods such as the radio-tagging of penguins can provide powerful tools for monitoring and hypothesis testing of previously inaccessible ecological processes. Ocean and atmosphere temperatures are expected to continue increasing along the western Antarctic Peninsula, which will undoubtedly affect regional marine ecosystems. New and emerging technologies such as unmanned underwater vehicles and individually mounted satellite tracking devices will provide the tools critical to documenting and understanding the widespread ecological change expected in polar regions.

A Modal Investigation of Elastic Anisotropy in Shallow Water Environments: A Study of Anisotropy Beyond VTI

DTIC Science & Technology

2010-10-01

sediments, Geophys. J. Int., 104, 241-254. Bohlke, B.M. and Bennett, R.H., 1980. Mississippi prodelta crusts: a clay fabric and geotech - nical analysis...Mar. Geotech ., 4, 55-81. Carlson, R.L., Schafternaar, C.H., and Moore, R.P.,, 1984. Causes of compressional-wave anisotropy in carbonate-bearing, deep

Astronaut Bonnie Dunbar watches crewmates during training

NASA Image and Video Library

1994-10-13

S94-47256 (13 Oct 1994) --- Astronaut Bonnie J. Dunbar, STS-71 mission specialist, smiles as she watches a crew mate (out of frame) make a simulated parachute landing in nearby water. The action came as part of an emergency bailout training session in the Johnson Space Center's (JSC) Weightless Environment Training Facility's (WET-F) 25-feet-deep pool.

Effect of hydrophobic environments on the hypothesized liquid-liquid critical point of water.

PubMed

Strekalova, Elena G; Corradini, Dario; Mazza, Marco G; Buldyrev, Sergey V; Gallo, Paola; Franzese, Giancarlo; Stanley, H Eugene

2012-01-01

The complex behavior of liquid water, along with its anomalies and their crucial role in the existence of life, continue to attract the attention of researchers. The anomalous behavior of water is more pronounced at subfreezing temperatures and numerous theoretical and experimental studies are directed towards developing a coherent thermodynamic and dynamic framework for understanding supercooled water. The existence of a liquid-liquid critical point in the deep supercooled region has been related to the anomalous behavior of water. However, the experimental study of supercooled water at very low temperatures is hampered by the homogeneous nucleation of the crystal. Recently, water confined in nanoscopic structures or in solutions has attracted interest because nucleation can be delayed. These systems have a tremendous relevance also for current biological advances; e.g., supercooled water is often confined in cell membranes and acts as a solvent for biological molecules. In particular, considerable attention has been recently devoted to understanding hydrophobic interactions or the behavior of water in the presence of apolar interfaces due to their fundamental role in self-assembly of micelles, membrane formation and protein folding. This article reviews and compares two very recent computational works aimed at elucidating the changes in the thermodynamic behavior in the supercooled region and the liquid-liquid critical point phenomenon for water in contact with hydrophobic environments. The results are also compared to previous reports for water in hydrophobic environments.

A fracture mechanics approach for estimating fatigue crack initiation in carbon and low-alloy steels in LWR coolant environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Park, H. B.; Chopra, O. K.

2000-04-10

A fracture mechanics approach for elastic-plastic materials has been used to evaluate the effects of light water reactor (LWR) coolant environments on the fatigue lives of carbon and low-alloy steels. The fatigue life of such steel, defined as the number of cycles required to form an engineering-size crack, i.e., 3-mm deep, is considered to be composed of the growth of (a) microstructurally small cracks and (b) mechanically small cracks. The growth of the latter was characterized in terms of {Delta}J and crack growth rate (da/dN) data in air and LWR environments; in water, the growth rates from long crack testsmore » had to be decreased to match the rates from fatigue S-N data. The growth of microstructurally small cracks was expressed by a modified Hobson relationship in air and by a slip dissolution/oxidation model in water. The crack length for transition from a microstructurally small crack to a mechanically small crack was based on studies on small crack growth. The estimated fatigue S-N curves show good agreement with the experimental data for these steels in air and water environments. At low strain amplitudes, the predicted lives in water can be significantly lower than the experimental values.« less

33 CFR 207.640 - Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use, administration, and...

Code of Federal Regulations, 2014 CFR

2014-07-01

... 33 Navigation and Navigable Waters 3 2014-07-01 2014-07-01 false Sacramento Deep Water Ship... REGULATIONS § 207.640 Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use, administration, and navigation. (a) Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use...

33 CFR 207.640 - Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use, administration, and...

Code of Federal Regulations, 2013 CFR

2013-07-01

... 33 Navigation and Navigable Waters 3 2013-07-01 2013-07-01 false Sacramento Deep Water Ship... REGULATIONS § 207.640 Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use, administration, and navigation. (a) Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use...

33 CFR 207.640 - Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use, administration, and...

Code of Federal Regulations, 2012 CFR

2012-07-01

... 33 Navigation and Navigable Waters 3 2012-07-01 2012-07-01 false Sacramento Deep Water Ship... REGULATIONS § 207.640 Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use, administration, and navigation. (a) Sacramento Deep Water Ship Channel Barge Lock and Approach Canals; use...

The dynamics of biogeographic ranges in the deep sea.

PubMed

McClain, Craig R; Hardy, Sarah Mincks

2010-12-07

Anthropogenic disturbances such as fishing, mining, oil drilling, bioprospecting, warming, and acidification in the deep sea are increasing, yet generalities about deep-sea biogeography remain elusive. Owing to the lack of perceived environmental variability and geographical barriers, ranges of deep-sea species were traditionally assumed to be exceedingly large. In contrast, seamount and chemosynthetic habitats with reported high endemicity challenge the broad applicability of a single biogeographic paradigm for the deep sea. New research benefiting from higher resolution sampling, molecular methods and public databases can now more rigorously examine dispersal distances and species ranges on the vast ocean floor. Here, we explore the major outstanding questions in deep-sea biogeography. Based on current evidence, many taxa appear broadly distributed across the deep sea, a pattern replicated in both the abyssal plains and specialized environments such as hydrothermal vents. Cold waters may slow larval metabolism and development augmenting the great intrinsic ability for dispersal among many deep-sea species. Currents, environmental shifts, and topography can prove to be dispersal barriers but are often semipermeable. Evidence of historical events such as points of faunal origin and climatic fluctuations are also evident in contemporary biogeographic ranges. Continued synthetic analysis, database construction, theoretical advancement and field sampling will be required to further refine hypotheses regarding deep-sea biogeography.

The dynamics of biogeographic ranges in the deep sea

PubMed Central

McClain, Craig R.; Hardy, Sarah Mincks

2010-01-01

Anthropogenic disturbances such as fishing, mining, oil drilling, bioprospecting, warming, and acidification in the deep sea are increasing, yet generalities about deep-sea biogeography remain elusive. Owing to the lack of perceived environmental variability and geographical barriers, ranges of deep-sea species were traditionally assumed to be exceedingly large. In contrast, seamount and chemosynthetic habitats with reported high endemicity challenge the broad applicability of a single biogeographic paradigm for the deep sea. New research benefiting from higher resolution sampling, molecular methods and public databases can now more rigorously examine dispersal distances and species ranges on the vast ocean floor. Here, we explore the major outstanding questions in deep-sea biogeography. Based on current evidence, many taxa appear broadly distributed across the deep sea, a pattern replicated in both the abyssal plains and specialized environments such as hydrothermal vents. Cold waters may slow larval metabolism and development augmenting the great intrinsic ability for dispersal among many deep-sea species. Currents, environmental shifts, and topography can prove to be dispersal barriers but are often semipermeable. Evidence of historical events such as points of faunal origin and climatic fluctuations are also evident in contemporary biogeographic ranges. Continued synthetic analysis, database construction, theoretical advancement and field sampling will be required to further refine hypotheses regarding deep-sea biogeography. PMID:20667884

Pollutants' Release, Redistribution and Remediation of Black Smelly River Sediment Based on Re-Suspension and Deep Aeration of Sediment.

PubMed

Zhu, Lin; Li, Xun; Zhang, Chen; Duan, Zengqiang

2017-04-01

Heavily polluted sediment is becoming an important part of water pollution, and this situation is particularly acute in developing countries. Sediment has gradually changed from being the pollution adsorbent to the release source and has influenced the water environment and public health. In this study, we evaluated the pollutant distribution in sediment in a heavily polluted river and agitated the sediment in a heavily polluted river to re-suspend it and re-release pollutants. We found that the levels of chemical oxygen demand (COD), NH₄⁺-N, total nitrogen (TN), and total phosphorus (TP) in overlying water were significantly increased 60 min after agitation. The distribution of the pollutants in the sediment present high concentrations of pollutants congregated on top of the sediment after re-settling, and their distribution decreased with depth. Before agitation, the pollutants were randomly distributed throughout the sediment. Secondly, deep sediment aeration equipment (a micro-porous air diffuser) was installed during the process of sedimentation to study the remediation of the sediment by continuous aeration. The results revealed that deep sediment aeration after re-suspension significantly promoted the degradation of the pollutants both in overlying water and sediment, which also reduced the thickness of the sediment from 0.9 m to 0.6 m. Therefore, sediment aeration after suspension was efficient, and is a promising method for sediment remediation applications.

Environmental risk management and preparations for the first deep water well in Nigeria

DOE Office of Scientific and Technical Information (OSTI.GOV)

Berger, F.

Statoil is among the leaders in protecting health, environment and safety in all aspects of the business. The evaluations of business opportunities and development of blocks opened by authorities for petroleum exploration, are assessed in accordance with the goals for environmental protection. Progressive improvement of environmental performance is secured through proper environmental risk management. In 1995, Statoil, the technical operator on Block 210 off the Nigerian coast, was the first company to drill in deep waters in this area. An exploration well was drilled in a water depth of about 320 meters. The drilling preparations included environmental assessment, drillers Hazop,more » oil spill drift calculations, oil spill response plans and environmental risk analysis. In the environmental preparations for the well, Statoil adhered to local and national government legislation, as well as to international guidelines and company standards. Special attention was paid to the environmental sensitivity of potentially affected areas. Statoil co-operated with experienced local companies, with the authorities and other international and national oil companies. This being the first deep water well offshore Nigeria, it was a challenge to co-operate with other operators in the area. The preparations that were carried out, will set the standard for future environmental work in the area. Co-operation difficulties in the beginning were turned positively into a attitude to the environmental challenge.« less

Hydro-geochemical modeling of subalpine urbanized area: geochemical characterization of the shallow and deep aquifers of the urban district of Como (first results).

NASA Astrophysics Data System (ADS)

Terrana, Silvia; Brunamonte, Fabio; Frascoli, Francesca; Ferrario, Maria Francesca; Michetti, Alessandro Maria; Pozzi, Andrea; Gambillara, Roberto; Binda, Gilberto

2016-04-01

One of the greatest environmental and social-economics threats is climate change. This topic, in the next few years, will have a significant impact on the availability of water resources of many regions. This is compounded by the strong anthropization of water systems that shows an intensification of conflicts for water resource exploitation. Therefore, it is necessary a sustainable manage of natural resources thorough knowledge of the hosting territories. The development of investigation and data processing methods are essential to reduce costs for the suitable use and protection of resources. Identify a sample area for testing the best approach is crucial. This research aims to find a valid methodology for the characterization, modeling and management of subalpine urban aquifers, and the urban district of Como appears perfect. The city of Como is located at the southern end of the western sector of Lake Como (N Italy). It is a coastal town, placed on a small alluvial plain, therefore in close communication with the lake. The plain is drained by two streams, which are presently artificially buried, and have an underground flow path in the urban section till the mouth. This city area, so, is suitable for this project as it is intensely urbanized, its dimensions is not too extensive and it is characterized by two aquifers very important and little known. These are a shallow aquifer and a deep aquifer, which are important not only for any water supply, but also for the stability of the ground subsidence in the city. This research is also the opportunity to work in a particular well-known area with high scientific significance; however, there is complete absence of information regarding the deep aquifer. Great importance has also the chosen and used of the more powerful open source software for this type of area, such as PHREEQC, EnvironInsite, PHREEQE etc., used for geological and geochemical data processing. The main goal of this preliminary work is the characterization of both aquifers and the comprehension of the interaction between the shallow one and deep one. The first results of geochemical and hydrological analyses in nine piezometer, seven in the shallow aquifer and two in the deep one, permit to identify a general characterization of groundwater: the waters of both the aquifers are calcium bicarbonate, with discontinuous enrichment in sulphate and silicate. The conductibility values are higher in the shallow aquifer then in the deep aquifer, this is an indication of the high flow rate of the deep one and of the higher level of vulnerability of the shallow water respect the urban pollutant. Particular is also the relatively high temperature for the deep water (15.5°C to 16.1°C). The next steps of work are an increase of geochemical analysis, with trace element, and the correlation with hydro-chemical surface water.

Species dominance and equitability: patterns in Cenozoic foraminifera of eastern North America

USGS Publications Warehouse

Gibson, T.G.; Hill, E.E.

1992-01-01

Species dominance in benthonic foraminifera, represented by percent of the assemblage composed of the single most abundant species, shows little change in observed range of values from shallow into deep-marine waters in 1005 samples from the Gulf of Mexico, Atlantic, and Arctic margins of North America. This finding contrasts with the model that species dominance is highest in shallow-marine environments and decreases offshore into deeper marine waters. Equitability, the relation of all species abundances within an assemblage, also shows little change between the values found in shallow-marine assemblages and those found in assemblages from deeper water environments. Equitability and dominance values found in 421 assemblages from Palaeocene, Eocene, Miocene, and Pleistocene strata of the Atlantic and E Gulf of Mexico coastal plains are similar to the modern values. -from Authors

Bathymetric and interspecific variability in maternal reproductive investment and diet of eurybathic echinoderms

NASA Astrophysics Data System (ADS)

Ross, David A. N.; Hamel, Jean-François; Mercier, Annie

2013-10-01

While conditions in shallow-water and deep-sea environments differ markedly, it remains unclear how eurybathic species adapt their life histories to cope with these changes. The present study compared indicators of maternal reproductive investment of three common echinoderms collected shallower than 20 m and deeper than 850 m: Cucumaria frondosa (Holothuroidea), Solaster endeca and Henricia sanguinolenta (Asteroidea). Depth-specific and species-specific differences were found in gonad indices (GI), potential fecundity, oocyte size frequency, as well as lipid classes and fatty acids measured in gonad tissue and oocytes. The asteroids, S. endeca and H. sanguinolenta, exemplified the interspecific trade-off between size and number of oocytes: the former had fewer larger oocytes than the latter, with higher total lipid proportions in them. However, intraspecifically, larger oocytes found in deep specimens of S. endeca did not translate into lower fecundity but rather into a seemingly higher GI, indicating greater investment per oocyte without reducing fecundity. Oocytes were absent in specimens of C. frondosa sampled in deep water, suggesting delayed or impaired maturation at the limit of their depth tolerance. Analysis of S. endeca sterol proportions in gonads and oocytes across depths showed higher sterol input into oocytes in females from the deep. Gonads of S. endeca and H. sanguinolenta contained similar essential fatty acids, but showed significant differences in major fatty acids and some of the less dominant ones, indicating diet specificities. Analyses within S. endeca showed evidence of similar feeding mode (carnivory) at both depths, but suggested shifts in the diet or synthesis of fatty acids, presumably reflecting differences in available food sources and/or adaptations to their respective environments.

The lantern shark's light switch: turning shallow water crypsis into midwater camouflage

PubMed Central

Claes, Julien M.; Mallefet, Jérôme

2010-01-01

Bioluminescence is a common feature in the permanent darkness of the deep-sea. In fishes, light is emitted by organs containing either photogenic cells (intrinsic photophores), which are under direct nervous control, or symbiotic luminous bacteria (symbiotic photophores), whose light is controlled by secondary means such as mechanical occlusion or physiological suppression. The intrinsic photophores of the lantern shark Etmopterus spinax were recently shown as an exception to this rule since they appear to be under hormonal control. Here, we show that hormones operate what amounts to a unique light switch, by acting on a chromatophore iris, which regulates light emission by pigment translocation. This result strongly suggests that this shark's luminescence control originates from the mechanism for physiological colour change found in shallow water sharks that also involves hormonally controlled chromatophores: the lantern shark would have turned the initial shallow water crypsis mechanism into a midwater luminous camouflage, more efficient in the deep-sea environment. PMID:20410033

Deep-sea benthic community and environmental impact assessment at the Atlantic Frontier

NASA Astrophysics Data System (ADS)

Gage, John D.

2001-05-01

The seabed community provides a sensitive litmus for environmental change. North Sea analysis of benthic populations provides an effective means for monitoring impacts from man's interventions, such as offshore oil exploitation and fishing, against baseline knowledge of the environment. Comparable knowledge of the benthic biology in the deep waters of the Atlantic Frontier beyond the N.E. Atlantic shelf edge is poorly developed. But uncertainties should not encourage assumptions and extrapolations from the better-known conditions on the continental shelf. While sampling at present still provides the best means to assess the health of the deepwater benthic habitat, protocols developed for deep-sea fauna should be applied. These are necessary because of (a) lower faunal densities, (b) higher species richness, (c) smaller body size, and (d) to ensure comparability with other deep-sea data. As in the North Sea, species richness and relative abundance can be analysed from quantitative samples in order to detect impacts. But analysis based on taxonomic sufficiency above species level is premature, even if arguably possible for coastal communities. Measures also need to ensure identifications are not forced to more familiar coastal species without proper study. Species-level analysis may be applied to seabed photographs of megafauna in relation to data on bottom environment, such as currents and the sediment, to monitor the health of the deep-water community. Although the composition of higher taxa in the benthic community is broadly similar to soft sediments on the shelf, concordance in sensitivities is speculative. Moreover, new organisms occur, such as giant protozoan xenophyophores, unknown on the continental shelf, whose sensitivities remain conjectural. Past knowledge of the benthic biology of the deep-water areas off Scotland is based on scattered stations and some more focussed, multidisciplinary studies, and should be significantly augmented by the results from the oil industry-funded Atlantic Margin Environmental Study cruises in 1996 and 1998. A predominantly depth-related pattern in variability applies here as found elsewhere in the deep ocean, and just sufficient knowledge-based predictive power exists to make comprehensive, high-resolution grid surveys unnecessary for the purpose of broad-scale environmental assessment. But new, small-scale site surveys remain necessary because of local-scale variability. Site survey should be undertaken in the context of existing knowledge of the deep sea in the UK area of the Atlantic Frontier and beyond, and can itself usefully be structured as tests of a projection from the regional scale to reduce sampling effort. It is to the benefit of all stakeholders that environmental assessment aspires to the highest scientific standards and contributes meaningfully to context knowledge. By doing so it will reduce uncertainties in future impact assessments and hence contribute usefully to environmental risk management.

The black coral fauna (Cnidaria: Antipatharia) of Bermuda with new records.

PubMed

Wagner, Daniel; Shuler, Andrew

2017-11-07

The black coral fauna of Bermudan waters is poorly known, in large part due to the logistical challenges of surveying deep-water (>50 m) environments where most species occur. In 2016, the Nekton Expedition sought to survey the deep-water biodiversity around Bermuda using manned submersibles and mixed-gas technical SCUBA. A total of 28 black coral specimens were collected, and these were examined based on skeletal spine morphology, polyp morphology, colony branching pattern and in situ photographs. The specimens were assigned to seven species in three families and four genera, including (1) Antipathes atlantica Gray, 1857, (2) Antipathes furcata Gray, 1857, (3) Stichopathes pourtalesi Brook, 1889, (4) Stichopathes sp., (5) Distichopathes filix (Pourtales, 1867), (6) Tanacetipathes hirta (Gray, 1857), and (7) Tanacetipathes tanacetum (Pourtales, 1867). Of these, three species (Stichopathes sp., S. pourtalesi, and D. filix), one genus (Distichopathes) and one family (Aphanipathidae) are reported from Bermudan waters for the first time, thereby increasing the known black coral diversity of Bermuda to twelve species, five genera and four families. The diagnostic characters of the taxa identified as part of this study are illustrated and described.

Physiological performance of the cold-water coral Dendrophyllia cornigera reveals its preference for temperate environments

NASA Astrophysics Data System (ADS)

Gori, Andrea; Reynaud, Stephanie; Orejas, Covadonga; Gili, Josep-Maria; Ferrier-Pagès, Christine

2014-09-01

Cold-water corals (CWCs) are key ecosystem engineers in deep-sea benthic communities around the world. Their distribution patterns are related to several abiotic and biotic factors, of which seawater temperature is arguably one of the most important due to its role in coral physiological processes. The CWC Dendrophyllia cornigera has the particular ability to thrive in several locations in which temperatures range from 11 to 17 °C, but to be apparently absent from most CWC reefs at temperatures constantly below 11 °C. This study thus aimed to assess the thermal tolerance of this CWC species, collected in the Mediterranean Sea at 12 °C, and grown at the three relevant temperatures of 8, 12, and 16 °C. This species displayed thermal tolerance to the large range of seawater temperatures investigated, but growth, calcification, respiration, and total organic carbon (TOC) fluxes severely decreased at 8 °C compared to the in situ temperature of 12 °C. Conversely, no significant differences in calcification, respiration, and TOC fluxes were observed between corals maintained at 12 and 16 °C, suggesting that the fitness of this CWC is higher in temperate rather than cold environments. The capacity to maintain physiological functions between 12 and 16 °C allows D. cornigera to be the most abundant CWC species in deep-sea ecosystems where temperatures are too warm for other CWC species (e.g., Canary Islands). This study also shows that not all CWC species occurring in the Mediterranean Sea (at deep-water temperatures of 12-14 °C) are currently living at their upper thermal tolerance limit.

Depth as an organizer of fish assemblages in floodplain lakes

USGS Publications Warehouse

Miranda, L.E.

2011-01-01

Depth reduction is a natural process in floodplain lakes, but in many basins has been accelerated by anthropogenic disturbances. A diverse set of 42 floodplain lakes in the Yazoo River Basin (Mississippi, USA) was examined to test the hypothesis of whether depth reduction was a key determinant of water quality and fish assemblage structure. Single and multiple variable analyses were applied to 10 commonly monitored water variables and 54 fish species. Results showed strong associations between depth and water characteristics, and between depth and fish assemblages. Deep lakes provided less variable environments, clearer water, and a wider range of microhabitats than shallow lakes. The greater environmental stability was reflected by the dominant species in the assemblages, which included a broader representation of large-body species, species less tolerant of extreme water quality, and more predators. Stability in deep lakes was further reflected by reduced among-lake variability in taxa representation. Fish assemblages in shallow lakes were more variable than deep lakes, and commonly dominated by opportunistic species that have early maturity, extended breeding seasons, small adult size, and short lifespan. Depth is a causal factor that drives many physical and chemical variables that contribute to organizing fish assemblages in floodplain lakes. Thus, correlations between fish and water transparency, temperature, oxygen, trophic state, habitat structure, and other environmental descriptors may ultimately be totally or partly regulated by depth. In basins undergoing rapid anthropogenic modifications, local changes forced by depth reductions may be expected to eliminate species available from the regional pool and could have considerable ecological implications. ?? 2010 Springer Basel AG (outside the USA).

Flood frequency matters: Why climate change degrades deep-water quality of peri-alpine lakes

NASA Astrophysics Data System (ADS)

Fink, Gabriel; Wessels, Martin; Wüest, Alfred

2016-09-01

Sediment-laden riverine floods transport large quantities of dissolved oxygen into the receiving deep layers of lakes. Hence, the water quality of deep lakes is strongly influenced by the frequency of riverine floods. Although flood frequency reflects climate conditions, the effects of climate variability on the water quality of deep lakes is largely unknown. We quantified the effects of climate variability on the potential shifts in the flood regime of the Alpine Rhine, the main catchment of Lake Constance, and determined the intrusion depths of riverine density-driven underflows and the subsequent effects on water exchange rates in the lake. A simplified hydrodynamic underflow model was developed and validated with observed river inflow and underflow events. The model was implemented to estimate underflow statistics for different river inflow scenarios. Using this approach, we integrated present and possible future flood frequencies to underflow occurrences and intrusion depths in Lake Constance. The results indicate that more floods will increase the number of underflows and the intensity of deep-water renewal - and consequently will cause higher deep-water dissolved oxygen concentrations. Vice versa, fewer floods weaken deep-water renewal and lead to lower deep-water dissolved oxygen concentrations. Meanwhile, a change from glacial nival regime (present) to a nival pluvial regime (future) is expected to decrease deep-water renewal. While flood frequencies are not expected to change noticeably for the next decades, it is most likely that increased winter discharge and decreased summer discharge will reduce the number of deep density-driven underflows by 10% and favour shallower riverine interflows in the upper hypolimnion. The renewal in the deepest layers is expected to be reduced by nearly 27%. This study underlines potential consequences of climate change on the occurrence of deep river underflows and water residence times in deep lakes.

A Modeling Study of Deep Water Renewal in the Red Sea

NASA Astrophysics Data System (ADS)

Yao, F.; Hoteit, I.

2016-02-01

Deep water renewal processes in the Red Sea are examined in this study using a 50-year numerical simulation from 1952-2001. The deep water in the Red Sea below the thermocline ( 200 m) exhibits a near-uniform vertical structure in temperature and salinity, but geochemical tracer distributions, such as 14C and 3He, and dissolved oxygen concentrations indicate that the deep water is renewed on time scales as short as 36 years. The renewal process is accomplished through a deep overturning cell that consists of a southward bottom current and a northward returning current at depths of 400-600 m. Three sources regions are proposed for the formation of the deep water, including two deep outflows from the Gulfs of Aqaba and Suez and winter deep convections in the northern Red Sea. The MITgcm (MIT general circulation model), which has been used to simulate the shallow overturning circulations in the Red Sea, is configured in this study with increased resolutions in the deep water. During the 50 years of simulation, artificial passive tracers added in the model indicate that the deep water in the Red Sea was only episodically renewed during some anomalously cold years; two significant episodes of deep water renewal are reproduced in the winters of 1983 and 1992, in accordance with reported historical hydrographic observations. During these renewal events, deep convections reaching the bottom of the basin occurred, which further facilitated deep sinking of the outflows from the Gulfs of Aqaba and Suez. Ensuing spreading of the newly formed deep water along the bottom caused upward displacements of thermocline, which may have profound effects on the water exchanges in the Strait of Bab el Mandeb between the Red Sea and the Gulf of Aden and the functioning of the ecosystem in the Red Sea by changing the vertical distributions of nutrients.

30 CFR 203.1 - What is MMS's authority to grant royalty relief?

Code of Federal Regulations, 2010 CFR

2010-07-01

... (water less than 400 meters deep) and you produce from an ultra-deep well (top of the perforated interval... less than 400 meters deep and you produce from a deep well (top of the perforated interval is at least... from any lease if: (1) Your lease is in deep water (water at least 200 meters deep); (2) Your lease is...

Basaltic maar-diatreme volcanism in the Lower Carboniferous of the Limerick Basin (SW Ireland)

NASA Astrophysics Data System (ADS)

Elliott, H. A. L.; Gernon, T. M.; Roberts, S.; Hewson, C.

2015-05-01

Lead-zinc exploration drilling within the Limerick Basin (SW Ireland) has revealed the deep internal architecture and extra-crater deposits of five alkali-basaltic maar-diatremes. These were emplaced as part of a regional north-east south-west tectonomagmatic trend during the Lower Carboniferous Period. Field relationships and textural observations suggest that the diatremes erupted into a shallow submarine environment. Limerick trace element data indicates a genetic relationship between the diatremes and extra-crater successions of the Knockroe Formation, which records multiple diatreme filling and emptying cycles. Deposition was controlled largely by bathymetry defined by the surrounding Waulsortian carbonate mounds. An initial non-diatreme forming eruption stage occurred at the water-sediment interface, with magma-water interaction prevented by high magma ascent rates. This was followed by seawater incursion and the onset of phreatomagmatic activity. Magma-water interaction generated poorly vesicular blocky clasts, although the co-occurrence of plastically deformed and highly vesicular clasts indicate that phreatomagmatic and magmatic processes were not mutually exclusive. At a later stage, the diatreme filled with a slurry of juvenile lapilli and country rock lithic clasts, homogenised by the action of debris jets. The resulting extra-crater deposits eventually emerged above sea level, so that water ingress significantly declined, and late-stage magmatic processes became dominant. These deposits, largely confined to the deep vents, incorporate high concentrations of partially sintered globular and large `raggy' lapilli showing evidence for heat retention. Our study provides new insights into the dynamics and evolution of basaltic diatremes erupting into a shallow water (20-120 m) submarine environment.

Community structure of planktonic methane-oxidizing bacteria in a subtropical reservoir characterized by dominance of phylotype closely related to nitrite reducer

NASA Astrophysics Data System (ADS)

Kojima, Hisaya; Tokizawa, Riho; Kogure, Kouhei; Kobayashi, Yuki; Itoh, Masayuki; Shiah, Fuh-Kwo; Okuda, Noboru; Fukui, Manabu

2014-07-01

Methane-oxidizing bacteria (MOB) gain energy from the oxidation of methane and may play important roles in freshwater ecosystems. In this study, the community structure of planktonic MOB was investigated in a subtropical reservoir. Bacterial community structure was investigated through the analysis of the 16S rRNA gene. Three groups of phylogenetically distinct MOB were detected in the clone libraries of polymerase chain reaction products obtained with universal primers. The groups belonged to the class Gammaproteobacteria, the class Alphaproteobacteria, and the candidate phylum NC10. The last group, which consists of close relatives of the nitrite reducer `Candidatus Methylomirabilis oxyfera', was frequently detected in the clone libraries of deep-water environments. The presence of 3 groups of MOB in deep water was also shown by a cloning analysis of the pmoA gene encoding particulate methane monooxygenase. The dominance of `M. oxyfera'-like organisms in deep water was confirmed by catalyzed reporter deposition-fluorescence in situ hybridization, in which cells stained with a specific probe accounted for 16% of total microbial cells. This is the first study to demonstrate that close relatives of the nitrite reducer can be major component of planktonic MOB community which may affect carbon flow in aquatic ecosystems.

Seismic patterns and migration history of submarine fan channels in deep-water area, Niger Delta, West Africa

NASA Astrophysics Data System (ADS)

Zhang, Guotao; Zhang, Shangfeng; Li, Yuan

2015-04-01

The channels of deep-water submarine fan under Niger delta slope are characterized by large dimensions special deposition positions and complex formation processes, its geographical location and sedimentary environment also hinder the research and exploration development. According to the strata slicing, RMS amplitude attribute and other techniques, we exhibit the platforms patterns of channels at different period, and based on the analysis of internal architecture and deformation history of channel-leveed systems, migration and evolution process of channel systems could be understood accurately. A great quantity of isolated channels develop in middle Miocene and aggrading streams in late Miocene, which generating because of large scale of turbidity caused by the drop of second order sea-level, which characterized by vertical accretion at smooth channel, while vertical accretion and lateral migration at bend. Evolution of channel systems can be divided into three stages: the initial erosion, erosion and filling alternately, and abandoned stage. With these three stages, the sinuosity of channel change from moderate to high, then decrease. Incision and filling of channels, being during the three development phases, is the driving force of meander-loops migration, which promote three kinds of migration patterns: lateral, down-system and combination migration. The research provides theoretical basis for high-precision prediction and evaluation of deep-water reservoir.

Methane assimilation and trophic interactions with marine Methylomicrobium in deep-water coral reef sediment off the coast of Norway.

PubMed

Jensen, Sigmund; Neufeld, Josh D; Birkeland, Nils-Kåre; Hovland, Martin; Murrell, John Colin

2008-11-01

Deep-water coral reefs are seafloor environments with diverse biological communities surrounded by cold permanent darkness. Sources of energy and carbon for the nourishment of these reefs are presently unclear. We investigated one aspect of the food web using DNA stable-isotope probing (DNA-SIP). Sediment from beneath a Lophelia pertusa reef off the coast of Norway was incubated until assimilation of 5 micromol 13CH4 g(-1) wet weight occurred. Extracted DNA was separated into 'light' and 'heavy' fractions for analysis of labelling. Bacterial community fingerprinting of PCR-amplified 16S rRNA gene fragments revealed two predominant 13C-specific bands. Sequencing of these bands indicated that carbon from 13CH4 had been assimilated by a Methylomicrobium and an uncultivated member of the Gammaproteobacteria. Cloning and sequencing of 16S rRNA genes from the heavy DNA, in addition to genes encoding particulate methane monooxygenase and methanol dehydrogenase, all linked Methylomicrobium with methane metabolism. Putative cross-feeders were affiliated with Methylophaga (Gammaproteobacteria), Hyphomicrobium (Alphaproteobacteria) and previously unrecognized methylotrophs of the Gammaproteobacteria, Alphaproteobacteria, Deferribacteres and Bacteroidetes. This first marine methane SIP study provides evidence for the presence of methylotrophs that participate in sediment food webs associated with deep-water coral reefs.

Water temperature, not fish morph, determines parasite infections of sympatric Icelandic threespine sticklebacks (Gasterosteus aculeatus).

PubMed

Karvonen, Anssi; Kristjánsson, Bjarni K; Skúlason, Skúli; Lanki, Maiju; Rellstab, Christian; Jokela, Jukka

2013-06-01

Parasite communities of fishes are known to respond directly to the abiotic environment of the host, for example, to water quality and water temperature. Biotic factors are also important as they affect the exposure profile through heterogeneities in parasite distribution in the environment. Parasites in a particular environment may pose a strong selection on fish. For example, ecological differences in selection by parasites have been hypothesized to facilitate evolutionary differentiation of freshwater fish morphs specializing on different food types. However, as parasites may also respond directly to abiotic environment the parasite risk does not depend only on biotic features of the host environment. It is possible that different morphs experience specific selection gradients by parasites but it is not clear how consistent the selection is when abiotic factors change. We examined parasite pressure in sympatric morphs of threespine stickleback (Gasterosteus aculeatus) across a temperature gradient in two large Icelandic lakes, Myvatn and Thingvallavatn. Habitat-specific temperature gradients in these lakes are opposite. Myvatn lava rock morph lives in a warm environment, while the mud morph lives in the cold. In Thingvallavatn, the lava rock morph lives in a cold environment and the mud morph in a warm habitat. We found more parasites in fish living in higher temperature in both lakes, independent of the fish morph, and this pattern was similar for the two dominating parasite taxa, trematodes and cestodes. However, at the same time, we also found higher parasite abundance in a third morph living in deep cold-water habitat in Thingvallavatn compared to the cold-water lava morph, indicating strong effect of habitat-specific biotic factors. Our results suggest complex interactions between water temperature and biotic factors in determining the parasite community structure, a pattern that may have implications for differentiation of stickleback morphs.

A Metagenomics Transect into the Deepest Point of the Baltic Sea Reveals Clear Stratification of Microbial Functional Capacities

PubMed Central

Poole, Anthony M.; Sjöberg, Britt-Marie; Sjöling, Sara

2013-01-01

The Baltic Sea is characterized by hyposaline surface waters, hypoxic and anoxic deep waters and sediments. These conditions, which in turn lead to a steep oxygen gradient, are particularly evident at Landsort Deep in the Baltic Proper. Given these substantial differences in environmental parameters at Landsort Deep, we performed a metagenomic census spanning surface to sediment to establish whether the microbial communities at this site are as stratified as the physical environment. We report strong stratification across a depth transect for both functional capacity and taxonomic affiliation, with functional capacity corresponding most closely to key environmental parameters of oxygen, salinity and temperature. We report similarities in functional capacity between the hypoxic community and hadal zone communities, underscoring the substantial degree of eutrophication in the Baltic Proper. Reconstruction of the nitrogen cycle at Landsort deep shows potential for syntrophy between archaeal ammonium oxidizers and bacterial denitrification at anoxic depths, while anaerobic ammonium oxidation genes are absent, despite substantial ammonium levels below the chemocline. Our census also reveals enrichment in genetic prerequisites for a copiotrophic lifestyle and resistance mechanisms reflecting adaptation to prevalent eutrophic conditions and the accumulation of environmental pollutants resulting from ongoing anthropogenic pressures in the Baltic Sea. PMID:24086414

Long-Term Monitoring of Dolphin Biosonar Activity in Deep Pelagic Waters of the Mediterranean Sea.

PubMed

Caruso, Francesco; Alonge, Giuseppe; Bellia, Giorgio; De Domenico, Emilio; Grammauta, Rosario; Larosa, Giuseppina; Mazzola, Salvatore; Riccobene, Giorgio; Pavan, Gianni; Papale, Elena; Pellegrino, Carmelo; Pulvirenti, Sara; Sciacca, Virginia; Simeone, Francesco; Speziale, Fabrizio; Viola, Salvatore; Buscaino, Giuseppa

2017-06-28

Dolphins emit short ultrasonic pulses (clicks) to acquire information about the surrounding environment, prey and habitat features. We investigated Delphinidae activity over multiple temporal scales through the detection of their echolocation clicks, using long-term Passive Acoustic Monitoring (PAM). The Istituto Nazionale di Fisica Nucleare operates multidisciplinary seafloor observatories in a deep area of the Central Mediterranean Sea. The Ocean noise Detection Experiment collected data offshore the Gulf of Catania from January 2005 to November 2006, allowing the study of temporal patterns of dolphin activity in this deep pelagic zone for the first time. Nearly 5,500 five-minute recordings acquired over two years were examined using spectrogram analysis and through development and testing of an automatic detection algorithm. Echolocation activity of dolphins was mostly confined to nighttime and crepuscular hours, in contrast with communicative signals (whistles). Seasonal variation, with a peak number of clicks in August, was also evident, but no effect of lunar cycle was observed. Temporal trends in echolocation corresponded to environmental and trophic variability known in the deep pelagic waters of the Ionian Sea. Long-term PAM and the continued development of automatic analysis techniques are essential to advancing the study of pelagic marine mammal distribution and behaviour patterns.

Stable Isotopes (δ13C and δ15N) in Two Depth-Segregated Species of Deep-Sea Gorgonian Octocorals from the Eastern Pacific

NASA Astrophysics Data System (ADS)

Barnes, S.; Williams, B.; Etnoyer, P. J.

2016-02-01

Found across the world's oceans and with ages up to hundreds of years, deep-sea gorgonian octocorals represent valuable archives of past oceanic climate change. Similar to the rings of trees, deep-sea gorgonian octocorals form their skeletons in distinct growth increments, and the chemical composition of these growth bands record changes in their environment over time. The ratios of carbon and nitrogen stable isotopes in the sinking particulate organic matter (POM) that the corals feed upon drive the δ13C and δ15N of the organic material in their growth bands. Changes in the coral skeletal δ13C and δ15N therefore reflect changes in surface water nutrient levels and primary productivity. Here, we measured δ13C and δ15N across the growth bands of three Acanthogorgia sp. and two Eugoria rubens specimens collected from the Channel Islands National Marine Sanctuary in California in 2015 to study inter- and intraspecies variability and develop these species as archives of surface water processes. The taxa represent two different depth strata in the Southern California Bight; Acanthogorgia are typically observed 150-400 meters deep, while Eugorgia corals occur in relatively shallower waters between 50-100 meters deep. Results will be interpreted in the context of eastern Pacific POM values and local environmental influences to examine changes in the corals' food source. Results will also provide information on subsequent alteration of carbon and nitrogen after their incorporation into Acanthogorgia and Eugoria skeletons to aid future study of these corals as proxy records of oceanic climate change.

Effect of Minerals on Intestinal IgA Production Using Deep Sea Water Drinks.

PubMed

Shiraishi, Hisashi; Fujino, Maho; Shirakawa, Naoki; Ishida, Nanao; Funato, Hiroki; Hirata, Ayumu; Abe, Noriaki; Iizuka, Michiro; Jobu, Kohei; Yokota, Junko; Miyamura, Mitsuhiko

2017-01-01

Minerals are essential for life, as they are a vital part of protein constituents, enzyme cofactors, and other components in living organisms. Deep sea water is characterized by its cleanliness and stable low temperature, and its possible health- and medical benefits are being studied. However, no study has yet evaluated the physical properties of the numerous commercially available deep sea water products, which have varying water sources and production methods. We analyzed these products' mineral content and investigated their effect on living organism, focusing on immune functions, and investigated the relation between physiological immunoactivities and mineral intake. We qualitatively analyzed the mineral compositions of the deep sea water drinks and evaluated the drinks' physical properties using principal component analysis, a type of multivariate analysis, of their mineral content. We create an iron and copper-deficient rat model and administered deep sea water drinks for 8 weeks. We then measured their fecal immunoglobulin A (IgA) to evaluate immune function. Principal component analysis suggested that physical properties of deep sea water drinks could be determined by their sources. Administration of deep sea water drinks increased fecal IgA, thus tending to stimulate immune function, but the extent of this effect varied by drink. Of the minerals contained in deep sea water, iron showed positive correlations with the fecal IgA. The principal component analysis used in this study is suitable for evaluating deep sea water containing many minerals, and our results form a useful basis for comparative evaluations of deep sea water's bioactivity.

Advances in Taxonomy, Ecology, and Biogeography of Dirivultidae (Copepoda) Associated with Chemosynthetic Environments in the Deep Sea

PubMed Central

Gollner, Sabine; Ivanenko, Viatcheslav N.; Arbizu, Pedro Martínez; Bright, Monika

2010-01-01

Background Copepoda is one of the most prominent higher taxa with almost 80 described species at deep-sea hydrothermal vents. The unique copepod family Dirivultidae with currently 50 described species is the most species rich invertebrate family at hydrothermal vents. Methodology/Principal Findings We reviewed the literature of Dirivultidae and provide a complete key to species, and map geographical and habitat specific distribution. In addition we discuss the ecology and origin of this family. Conclusions/Significance Dirivultidae are only present at deep-sea hydrothermal vents and along the axial summit trough of midocean ridges, with the exception of Dirivultus dentaneus found associated with Lamellibrachia species at 1125 m depth off southern California. To our current knowledge Dirivultidae are unknown from shallow-water vents, seeps, whale falls, and wood falls. They are a prominent part of all communities at vents and in certain habitat types (like sulfide chimneys colonized by pompei worms) they are the most abundant animals. They are free-living on hard substrate, mostly found in aggregations of various foundation species (e.g. alvinellids, vestimentiferans, and bivalves). Most dirivultid species colonize more than one habitat type. Dirivultids have a world-wide distribution, but most genera and species are endemic to a single biogeographic region. Their origin is unclear yet, but immigration from other deep-sea chemosynthetic habitats (stepping stone hypothesis) or from the deep-sea sediments seems unlikely, since Dirivultidae are unknown from these environments. Dirivultidae is the most species rich family and thus can be considered the most successful taxon at deep-sea vents. PMID:20838422

Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics- and methane-rich sediments off Shimokita Peninsula.

PubMed

Kobayashi, Tohru; Koide, Osamu; Mori, Kozue; Shimamura, Shigeru; Matsuura, Takae; Miura, Takeshi; Takaki, Yoshihiro; Morono, Yuki; Nunoura, Takuro; Imachi, Hiroyuki; Inagaki, Fumio; Takai, Ken; Horikoshi, Koki

2008-07-01

"A meta-enzyme approach" is proposed as an ecological enzymatic method to explore the potential functions of microbial communities in extreme environments such as the deep marine subsurface. We evaluated a variety of extra-cellular enzyme activities of sediment slurries and isolates from a deep subseafloor sediment core. Using the new deep-sea drilling vessel "Chikyu", we obtained 365 m of core sediments that contained approximately 2% organic matter and considerable amounts of methane from offshore the Shimokita Peninsula in Japan at a water depth of 1,180 m. In the extra-sediment fraction of the slurry samples, phosphatase, esterase, and catalase activities were detected consistently throughout the core sediments down to the deepest slurry sample from 342.5 m below seafloor (mbsf). Detectable enzyme activities predicted the existence of a sizable population of viable aerobic microorganisms even in deep subseafloor habitats. The subsequent quantitative cultivation using solid media represented remarkably high numbers of aerobic, heterotrophic microbial populations (e.g., maximally 4.4x10(7) cells cm(-3) at 342.5 mbsf). Analysis of 16S rRNA gene sequences revealed that the predominant cultivated microbial components were affiliated with the genera Bacillus, Shewanella, Pseudoalteromonas, Halomonas, Pseudomonas, Paracoccus, Rhodococcus, Microbacterium, and Flexibacteracea. Many of the predominant and scarce isolates produced a variety of extra-cellular enzymes such as proteases, amylases, lipases, chitinases, phosphatases, and deoxyribonucleases. Our results indicate that microbes in the deep subseafloor environment off Shimokita are metabolically active and that the cultivable populations may have a great potential in biotechnology.

Reconstruction of the Nd isotope composition of seawater on epicontinental seas: Testing the potential of Fe-Mn oxyhydroxide coatings on foraminifera tests for deep-time investigations

NASA Astrophysics Data System (ADS)

Charbonnier, Guillaume; Pucéat, Emmanuelle; Bayon, Germain; Desmares, Delphine; Dera, Guillaume; Durlet, Christophe; Deconinck, Jean-François; Amédro, Francis; Gourlan, Alexandra T.; Pellenard, Pierre; Bomou, Brahimsamba

2012-12-01

The Fe-Mn oxide fraction leached from deep-sea sediments has been increasingly used to reconstruct the Nd isotope composition of deep water masses, that can be used to track changes in oceanic circulation with a high temporal resolution. Application of this archive to reconstruct the Nd isotope composition of bottom seawater in shallow shelf environments remained however to be tested. Yet as the Nd isotope composition of seawater on continental margins is particularly sensitive to changes in erosional inputs, establishment of neritic seawater Nd isotope evolution around areas of deep water formation would be useful to discriminate the influence of changes in oceanic circulation and in isotopic composition of erosional inputs on the Nd isotope record of deep waters. The purpose of this study is to test the potential of Fe-Mn coatings leached from foraminifera tests to reconstruct the Nd isotope composition of seawater in shelf environments for deep-time intervals. Albian to Turonian samples from two different outcrops have been recovered, from the Paris Basin (Wissant section, northern France) and from the Western Interior Seaway (Hot Spring, South Dakota, USA), that were deposited in epicontinental seas. Rare Earth Element (REE) spectra enriched in middle REEs in the foraminifera leach at Wissant highlight the presence of Fe-Mn oxides. The similarity of the Nd isotopic signal of the Fe-Mn oxide fraction leached from foraminifera tests with that of fish teeth suggests that Fe-Mn oxides coating foraminifera can be good archives of shelf bottom seawater Nd isotopic composition. Inferred bottom shelf water Nd isotope compositions at Wissant range from -8.5 to -9.7 ɛ-units, about 1.5-2 ɛ-units higher than that of the contemporaneous local detrital fraction. At Hot Spring, linear REE spectra characterizing foraminifera leach may point to an absence of authigenic marine Fe-Mn oxide formation in this area during the Late Cenomanian-Early Turonian, consistent with dysoxic to anoxic conditions at Hot Spring, contemporaneous to an Oceanic Anoxic Event. The similarity of the Nd isotopic signal of the carbonate matrix of foraminifera with that of fish teeth suggests that it records the Nd isotope composition of bottom shelf seawater as well. Inferred bottom shelf water Nd isotope compositions at Hot Spring are quite radiogenic, between -7 and -6 ɛ-units, about 2.5-4 ɛ-units higher than that of the contemporaneous local detrital fraction. In contrast, in both sections Fe-Mn oxides leached directly from the decarbonated sediment tend to yield a less radiogenic Nd isotopic composition, typically between 0.2 and 0.8 ɛ-units lower, that is intermediate between that of fish teeth and of the detrital fraction. This suggests the contribution of pre-formed continental Fe-Mn oxides to the Nd isotopic signal, along with authigenic marine oxides, or a detrital contamination during leaching.

STS-52 Commander Wetherbee, in LES/LEH, during JSC WETF bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Commander James D. Wetherbee, fully outfitted in a launch and entry suit (LES) and launch and entry helmet (LEH), prepares for emergency egress (bailout) training exercise in JSC's Weightless Environment Training Facility (WETF) Bldg 29 pool. The WETF's 25-ft deep pool will be used to simulate a water landing.

75 FR 38939 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Catcher...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-07

.... 0910131362-0087-02] RIN 0648-XX33 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...; closure. SUMMARY: NMFS is prohibiting directed fishing for species that comprise the deep-water species... Pacific halibut prohibited species catch (PSC) sideboard limit specified for the deep-water species...

Relative Abundance and Diversity of Bacterial Methanotrophs at the Oxic-Anoxic Interface of the Congo Deep-Sea Fan.

PubMed

Bessette, Sandrine; Moalic, Yann; Gautey, Sébastien; Lesongeur, Françoise; Godfroy, Anne; Toffin, Laurent

2017-01-01

Sitting at ∼5,000 m water depth on the Congo-Angola margin and ∼760 km offshore of the West African coast, the recent lobe complex of the Congo deep-sea fan receives large amounts of fluvial sediments (3-5% organic carbon). This organic-rich sedimentation area harbors habitats with chemosynthetic communities similar to those of cold seeps. In this study, we investigated relative abundance, diversity and distribution of aerobic methane-oxidizing bacteria (MOB) communities at the oxic-anoxic interface of sedimentary habitats by using fluorescence in situ hybridization and comparative sequence analysis of particulate mono-oxygenase ( pmoA ) genes. Our findings revealed that sedimentary habitats of the recent lobe complex hosted type I and type II MOB cells and comparisons of pmoA community compositions showed variations among the different organic-rich habitats. Furthermore, the pmoA lineages were taxonomically more diverse compared to methane seep environments and were related to those found at cold seeps. Surprisingly, MOB phylogenetic lineages typical of terrestrial environments were observed at such water depth. In contrast, MOB cells or pmoA sequences were not detected at the previous lobe complex that is disconnected from the Congo River inputs.

Environmental Systems Microbiology of Contaminated Environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sayler, Gary; Hazen, Terry C.

Environmental Systems Microbiology is well positioned to move forward in dynamic complex system analysis probing new questions and developing new insight into the function, robustness and resilience in response to anthropogenic perturbations. Recent studies have demonstrated that natural bacterial communities can be used as quantitative biosensors in both groundwater and deep ocean water, predicting oil concentration from the Gulf of Mexico Deep Water Horizon spill and from groundwater at nuclear production waste sites (16, 17, 25). Since the first demonstration of catabolic gene expression in soil remediation (34) it has been clear that extension beyond organismal abundance to process andmore » function of microbial communities as a whole using the whole suite of omic tools available to the post genomic era. Metatranscriptomics have been highlighted as a prime vehicle for understanding responses to environmental drivers (35) in complex systems and with rapidly developing metabolomics, full functional understanding of complex community biogeochemical cycling is an achievable goal. Perhaps more exciting is the dynamic nature of these systems and their complex adaptive strategies that may lead to new control paradigms and emergence of new states and function in the course of a changing environment.« less

Perfluorinated Compounds in Greenhouse and Open Agricultural Producing Areas of Three Provinces of China: Levels, Sources and Risk Assessment

PubMed Central

Zhang, Yanwei; Tan, Dongfei; Geng, Yue; Wang, Lu; Peng, Yi; He, Zeying; Xu, Yaping; Liu, Xiaowei

2016-01-01

Field investigations on perfluoroalkyl acid (PFAA) levels in various environmental matrixes were reported, but there is still a lack of PFAA level data for agricultural environments, especially agricultural producing areas, so we collected soil, irrigation water and agricultural product samples from agricultural producing areas in the provinces of Liaoning, Shandong and Sichuan in China. The background pollution from instruments was removed and C4–C18 PFAAs were detected by LC-MS/MS. The concentrations of PFAAs in the top and deep layers of soil were compared, and the levels of PFAAs in different agricultural environments (greenhouses and open agriculture) were analyzed. We found the order of PFAA levels by province was Shandong > Liaoning > Sichuan. A descending trend of PFAA levels from top to deep soil and open to greenhouse agriculture was shown and perfluorobutanoic acid (PFBA) was considered as a marker for source analysis. Bean vegetables contribute highly to the overall PFAA load in vegetables. A significant correlation was shown between irrigation water and agricultural products. The EDI (estimated daily intake) from vegetables should be of concern in China. PMID:27973400

The development of deep karst in the anticlinal aquifer structure based on the coupling of multistage flow systems

NASA Astrophysics Data System (ADS)

Xu, M.; Zhong, L.; Yang, Y.

2017-12-01

Under the background of neotectonics, the multistage underground flow system has been form due the different responses of main stream and tributaries to crust uplift. The coupling of multistage underground flow systems influences the development of karst thoroughly. At first, the research area is divided into vadose area, shunted area and exorheic area based on the development characteristics of transverse valley. Combining the controlling-drain action with topographic index and analyzing the coupling features of multistage underground flow system. And then, based on the coupling of multistage underground flow systems, the characteristics of deep karst development were verified by the lossing degree of surface water, water bursting and karst development characteristics of tunnels. The vadose area is regional water system based, whose deep karst developed well. It resulted the large water inflow of tunnels and the surface water drying up. The shunted area, except the region near the transverse valleys, is characterized by regional water system. The developed deep karst make the surface water connect with deep ground water well, Which caused the relatively large water flow of tunnels and the serious leakage of surface water. The deep karst relatively developed poor in the regions near transverse valleys which is characterized by local water system. The exorheic area is local water system based, whose the deep karst developed poor, as well as the connection among surface water and deep ground water. It has result in the poor lossing of the surface water under the tunnel construction. This study broadens the application field of groundwater flow systems theory, providing a new perspective for the study of Karst development theory. Meanwhile it provides theoretical guidance for hazard assessment and environmental negative effect in deep-buried Karst tunnel construction.

Study on Seismogenesis of 2013 Ms5.1 Badong Earthquake in the Three Gorges Reservoir Region

NASA Astrophysics Data System (ADS)

Li, X.; Zeng, Z.; Xu, S.; He, C.

2015-12-01

On 16 December, 2013, an earthquake of Ms5.1 occurred in Badong County, the Three Gorges Reservoir area, China. We collected all the 150 published focal mechanism solutions (FMS) and inversed the tectonic stress field in Badong, the Three Gorges Dam and Huangling anticline area using the software SATSI (Hardebeck and Michael, 2006). Inversion results show that the orientations of maximum principle stress axis (σ1) in Badong plunge to NNE or SSW. Detailed characteristics of the stress field indicate that the σ1 axis is almost vertical in the center of Huangling anticline and turns horizontal to the west. As to deep structures, we studied the satellite gravity anomalies of 8-638 order in this area using the EIGEN-6C2 model provided by ICGRM. Combining the seismic sounding profile through the epicenter of Badong earthquake and the petrology data, we reinterpreted the deep structure in the study area. The results show that the deep crust in Badong is unstable and the deep material's upwelling leads to Huangling anticline continued uplifting, which is consistent with the result indicated from the stress filed. Both of them provide energy for the preparation of earthquake. The FMS shows that Gaoqiao Fault is the causative fault of this Ms5.1 earthquake. Field investigations indicated that the lithology and fracture characteristic in Badong is beneficial to reservoir water infiltration. Before the earthquake, reservoir water level raised to 175m, the highest storage level, which increased the loading. Based on above researches, we believe that the Ms5.1 Badong earthquake is controlled by deep tectonic environment and stress field in shallow crust. The reservoir water infiltration and uploading increase generated by water storage of the Three Gorges area reduced the strength of Gaoqiao Fault and changed its stress state. These factors jointly promoted an abrupt movement of the fault in the critical stress state, and triggered the Ms5.1 Badong earthquake.

Uptake and distribution of organo-iodine in deep-sea corals.

PubMed

Prouty, Nancy G; Roark, E Brendan; Mohon, Leslye M; Chang, Ching-Chih

2018-07-01

Understanding iodine concentration, transport, and bioavailability is essential in evaluating iodine's impact to the environment and its effectiveness as an environmental biogeotracer. While iodine and its radionuclides have proven to be important tracers in geologic and biologic studies, little is known about transport of this element to the deep sea and subsequent uptake in deep-sea coral habitats. Results presented here on deep-sea black coral iodine speciation and iodine isotope variability provides key information on iodine behavior in natural and anthropogenic environments, and its geochemical pathway in the Gulf of Mexico. Organo-iodine is the dominant iodine species in the black corals, demonstrating that binding of iodine to organic matter plays an important role in the transport and transfer of iodine to the deep-sea corals. The identification of growth bands captured in high-resolution scanning electron images (SEM) with synchronous peaks in iodine variability suggest that riverine delivery of terrestrial-derived organo-iodine is the most plausible explanation to account for annual periodicity in the deep-sea coral geochemistry. Whereas previous studies have suggested the presence of annual growth rings in deep-sea corals, this present study provides a mechanism to explain the formation of annual growth bands. Furthermore, deep-sea coral ages based on iodine peak counts agree well with those ages derived from radiocarbon ( 14 C) measurements. These results hold promise for developing chronologies independent of 14 C dating, which is an essential component in constraining reservoir ages and using radiocarbon as a tracer of ocean circulation. Furthermore, the presence of enriched 129 I/ 127 I ratios during the most recent period of skeleton growth is linked to nuclear weapons testing during the 1960s. The sensitivity of the coral skeleton to record changes in surface water 129 I composition provides further evidence that iodine composition and isotope variability captured in proteinaceous deep-sea corals is a promising geochronometer as well as an emerging tracer for continental material flux. Published by Elsevier Ltd.

Uptake and distribution of organo-iodine in deep-sea corals

USGS Publications Warehouse

Prouty, Nancy G.; Roark, E. Brendan; Mohon, Leslye M.; Chang, Ching-Chih

2018-01-01

Understanding iodine concentration, transport, and bioavailability is essential in evaluating iodine's impact to the environment and its effectiveness as an environmental biogeotracer. While iodine and its radionuclides have proven to be important tracers in geologic and biologic studies, little is known about transport of this element to the deep sea and subsequent uptake in deep-sea coral habitats. Results presented here on deep-sea black coral iodine speciation and iodine isotope variability provides key information on iodine behavior in natural and anthropogenic environments, and its geochemical pathway in the Gulf of Mexico. Organo-iodine is the dominant iodine species in the black corals, demonstrating that binding of iodine to organic matter plays an important role in the transport and transfer of iodine to the deep-sea corals. The identification of growth bands captured in high-resolution scanning electron images (SEM) with synchronous peaks in iodine variability suggest that riverine delivery of terrestrial-derived organo-iodine is the most plausible explanation to account for annual periodicity in the deep-sea coral geochemistry. Whereas previous studies have suggested the presence of annual growth rings in deep-sea corals, this present study provides a mechanism to explain the formation of annual growth bands. Furthermore, deep-sea coral ages based on iodine peak counts agree well with those ages derived from radiocarbon (14C) measurements. These results hold promise for developing chronologies independent of 14C dating, which is an essential component in constraining reservoir ages and using radiocarbon as a tracer of ocean circulation. Furthermore, the presence of enriched 129I/127I ratios during the most recent period of skeleton growth is linked to nuclear weapons testing during the 1960s. The sensitivity of the coral skeleton to record changes in surface water 129I composition provides further evidence that iodine composition and isotope variability captured in proteinaceous deep-sea corals is a promising geochronometer as well as an emerging tracer for continental material flux.

Insights into deep-sea adaptations and host-symbiont interactions: A comparative transcriptome study on Bathymodiolus mussels and their coastal relatives.

PubMed

Zheng, Ping; Wang, Minxiao; Li, Chaolun; Sun, Xiaoqing; Wang, Xiaocheng; Sun, Yan; Sun, Song

2017-10-01

Mussels (Bivalve: Mytilidae) have adapted to various habitats, from fresh water to the deep sea. To understand their adaptive characteristics in different habitats, particularly in the bathymodiolin mussels in deep-sea chemosynthetic ecosystems, we conducted a comparative transcriptomic analysis between deep-sea bathymodiolin mussels and their shallow-water relatives. A number of gene families related to stress responses were shared across all mussels, without specific or significantly expanded families in deep-sea species, indicating that all mussels are capable of adapting to diverse harsh environments, but that different members of the same gene family may be preferentially utilized by different species. One of the most extraordinary trait of bathymodiolin mussels is their endosymbiosis. Lineage-specific and positively selected TLRs and highly expressed C1QDC proteins were identified in the gills of the bathymodiolins, suggesting their possible functions in symbiont recognition. However, pattern recognition receptors of the bathymodiolins were globally reduced, facilitating the invasion and maintenance of the symbionts obtained by either endocytosis or phagocytosis. Additionally, various transporters were positively selected or more highly expressed in the deep-sea mussels, indicating a means by which necessary materials could be provided for the symbionts. Key genes supporting lysosomal activity were also positively selected or more highly expressed in the deep-sea mussels, suggesting that nutrition fixed by the symbionts can be absorbed in a "farming" way wherein the symbionts are digested by lysosomes. Regulation of key physiological processes including lysosome activity, apoptosis and immune reactions is needed to maintain a stable host-symbiont relationship, but the mechanisms are still unclear. © 2017 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

Microbial growth under a high-pressure CO2 environment

NASA Astrophysics Data System (ADS)

Thompson, J. R.; Hernandez, H. H.

2009-12-01

Carbon capture and storage (CCS) of CO2 has the potential to significantly reduce the emission of greenhouse gasses associated with fossil fuel combustion. The largest potential for storing captured CO2 in the United Sates is in deep geologic saline formations. Currently, little is known about the effects of CO2 storage on biologically active microbial communities found in the deep earth biosphere. Therefore, to investigate how deep earth microbial communities will be affected by the storage of CO2, we have built a high-pressure microbial growth system in which microbial samples are subjected to a supercritical CO2 (scCO2) environment. Recently we have isolated a microbial consortium that is capable of growth and extracellular matrix production in nutrient media under a supercritical CO2 headspace. This consortium was cultivated from hydrocarbon residues associated with saline formation waters and includes members of the gram-positive Bacillus genus. The cultivation of actively growing cells in an environment containing scCO2 is unexpected based on previous experimental evidence of microbial sterilization attributed to the acidic, desiccating, and solvent-like properties of scCO2. Such microbial consortia have potential for development as (i) biofilm barriers for geological carbon-dioxide sequestration, and as (ii) agents of biocatalysis in environmentally-friendly supercritical (sc) CO2 solvent systems. The discovery that microbes can remain biologically active, and grow, in these environments opens new frontiers for the use of self-regenerating biological systems in engineering applications.

Circulation in the Ecologically Protected Lau Basin

NASA Astrophysics Data System (ADS)

Simons, E.; Speer, K. G.; Weijer, W.

2016-12-01

The Lau Basin, located in the South Pacific, north of New Zealand and East of Fiji, is a back-arc basin with active hydrothermal vents and volcanoes. In September 2015, the New Zealand Ministry for the Environment announced the new Kermadec Ocean Sanctuary in the southern portion of the basin. The sanctuary, which covers more than 620,000 square kilometers, is the world's largest protected marine environment boasting endangered species from turtles, whales, and seabirds to corals, shellfish, and zooplankton. Though protections are in place for the ecological residents of the basin, little is known about the fluid circulation that permits such ecological diversity. Whitworth et al. (1999), explored the water-masses associated with the deep western boundary current (DWBC) in the Tonga-Kermadec Trench and found the trench to be a passageway for Circumpolar Deep Water (CDW) into the South Pacific. In this project, an analysis of Ridge 2000 Program floats and Argo floats show intrusion of water from the trench into the basin, potentially providing another pathway of CDW into the western edge of the South Pacific. Using a simple model developed by Stommel-Arons (1960) and expanded upon by Pedlosky (1989) for abyssal circulation, the bulk of the flow pattern observed from the floats is qualitatively described, including the well-defined DWBC, first observed in this data, along the Lau-Fiji ridge.

Habitat preference of Viminella flagellum (Alcyonacea: Ellisellidae) in relation to bathymetric variables in southeastern Sardinian waters

NASA Astrophysics Data System (ADS)

Giusti, M.; Bo, M.; Angiolillo, M.; Cannas, R.; Cau, A.; Follesa, M. C.; Canese, S.

2017-04-01

The whip-like gorgonian Viminella flagellum (Alcyonacea, Ellisellidae) has an Atlantic-Mediterranean distribution. In Italian seas, the species is a common component of deep-sea rocky environments from the north-western Mediterranean area to the Strait of Sicily. V. flagellum grows in deep habitats, sometimes outlining the environment with dense forests. This work describes its habitat in an area in the southeastern Sardinian waters (central-western Mediterranean Sea), where a dense forest of the species was found. The specimens were filmed and photographed between 120 and 260 m depth with a Remotely Operated Vehicle (ROV). High-resolution multibeam echosounder (MBES) bathymetry data of the area were acquired and morphometric parameters were derived. These parameters were assumed to be relevant for the distribution of the whip-like gorgonians and were used in an Ecological Niche Factor Analysis (ENFA) to explore the niche and habitat preference of the target species. In order to identify which Eco-geographical variables are useful to predict coral distribution, we used the Maximum Entropy model (MaxEnt). Our results gave a first description of the habitat preference of V. flagellum. Specimens were found in a distinctive habitat, with respect to the overall features of the entire studied area which was characterised by a marked slope in a simple rocky seabed system, within a water depth range of 125-150 m.

Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments

PubMed Central

Bik, Holly M.; Sung, Way; De Ley, Paul; Baldwin, James G.; Sharma, Jyotsna; Rocha-Olivares, Axayácatl; Thomas, W. Kelley

2011-01-01

Summary Microbial eukaryotes (nematodes, protists, fungi, etc., loosely referred to as meiofauna) are ubiquitous in marine sediments and likely play pivotal roles in maintaining ecosystem function. Although the deep-sea benthos represents one of the world’s largest habitats, we lack a firm understanding of the biodiversity and community interactions amongst meiobenthic organisms in this ecosystem. Within this vast environment key questions concerning the historical genetic structure of species remain a mystery, yet have profound implications for our understanding of global biodiversity and how we perceive and mitigate the impact of environmental change and anthropogenic disturbance. Using a metagenetic approach, we present an assessment of microbial eukaryote communities across depth (shallow water to abyssal) and ocean basins (deep-sea Pacific and Atlantic). Within the 12 sites examined, our results suggest that some taxa can maintain eurybathic ranges and cosmopolitan deep-sea distributions, but the majority of species appear to be regionally restricted. For OCTUs reporting wide distributions, there appears to be a taxonomic bias towards a small subset of taxa in most phyla; such bias may be driven by specific life history traits amongst these organisms. In addition, low genetic divergence between geographically disparate deep-sea sites suggests either a shorter coalescence time between deep-sea regions or slower rates of evolution across this vast oceanic ecosystem. While high-throughput studies allow for broad assessment of genetic patterns across microbial eukaryote communities, intragenomic variation in rRNA gene copies and the patchy coverage of reference databases currently present substantial challenges for robust taxonomic interpretations of eukaryotic datasets. PMID:21985648

Micelle structure in a deep eutectic solvent: a small-angle scattering study.

PubMed

Sanchez-Fernandez, A; Edler, K J; Arnold, T; Heenan, R K; Porcar, L; Terrill, N J; Terry, A E; Jackson, A J

2016-05-18

In recent years many studies into green solvents have been undertaken and deep eutectic solvents (DES) have emerged as sustainable and green alternatives to conventional solvents since they may be formed from cheap non-toxic organic precursors. In this study we examine amphiphile behaviour in these novel media to test our understanding of amphiphile self-assembly within environments that have an intermediate polarity between polar and non-polar extremes. We have built on our recently published results to present a more detailed structural characterisation of micelles of sodium dodecylsulfate (SDS) within the eutectic mixture of choline chloride and urea. Here we show that SDS adopts an unusual cylindrical aggregate morphology, unlike that seen in water and other polar solvents. A new morphology transition to shorter aggregates was found with increasing concentration. The self-assembly of SDS was also investigated in the presence of water; which promotes the formation of shorter aggregates.

Eukaryotic opportunists dominate the deep-subsurface biosphere in South Africa

PubMed Central

Borgonie, G.; Linage-Alvarez, B.; Ojo, A. O.; Mundle, S.O.C.; Freese, L B.; Van Rooyen, C.; Kuloyo, O.; Albertyn, J.; Pohl, C.; Cason, E. D.; Vermeulen, J.; Pienaar, C.; Litthauer, D.; Van Niekerk, H.; Van Eeden, J.; Lollar, B. Sherwood.; Onstott, T. C.; Van Heerden, E.

2015-01-01

Following the discovery of the first Eukarya in the deep subsurface, intense interest has developed to understand the diversity of eukaryotes living in these extreme environments. We identified that Platyhelminthes, Rotifera, Annelida and Arthropoda are thriving at 1.4 km depths in palaeometeoric fissure water up to 12,300 yr old in South African mines. Protozoa and Fungi have also been identified; however, they are present in low numbers. Characterization of the different species reveals that many are opportunistic organisms with an origin due to recharge from surface waters rather than soil leaching. This is the first known study to demonstrate the in situ distribution of biofilms on fissure rock faces using video documentation. Calculations suggest that food, not dissolved oxygen is the limiting factor for eukaryal population growth. The discovery of a group of Eukarya underground has important implications for the search for life on other planets in our solar system. PMID:26597082

Eukaryotic opportunists dominate the deep-subsurface biosphere in South Africa.

PubMed

Borgonie, G; Linage-Alvarez, B; Ojo, A O; Mundle, S O C; Freese, L B; Van Rooyen, C; Kuloyo, O; Albertyn, J; Pohl, C; Cason, E D; Vermeulen, J; Pienaar, C; Litthauer, D; Van Niekerk, H; Van Eeden, J; Sherwood Lollar, B; Onstott, T C; Van Heerden, E

2015-11-24

Following the discovery of the first Eukarya in the deep subsurface, intense interest has developed to understand the diversity of eukaryotes living in these extreme environments. We identified that Platyhelminthes, Rotifera, Annelida and Arthropoda are thriving at 1.4 km depths in palaeometeoric fissure water up to 12,300 yr old in South African mines. Protozoa and Fungi have also been identified; however, they are present in low numbers. Characterization of the different species reveals that many are opportunistic organisms with an origin due to recharge from surface waters rather than soil leaching. This is the first known study to demonstrate the in situ distribution of biofilms on fissure rock faces using video documentation. Calculations suggest that food, not dissolved oxygen is the limiting factor for eukaryal population growth. The discovery of a group of Eukarya underground has important implications for the search for life on other planets in our solar system.

New Era of Scientific Ocean Drilling

NASA Astrophysics Data System (ADS)

Eguchi, N.; Toczko, S.; Sanada, Y.; Igarashi, C.; Kubo, Y.; Maeda, L.; Sawada, I.; Takase, K.; Kyo, N.

2014-12-01

The D/V Chikyu, committed to scientific ocean drilling since 2007, has completed thirteen IODP expeditions, and Chikyu's enhanced drilling technology gives us the means to reach deep targets, enhanced well logging, deep water riserless drilling, and state of the art laboratory. Chikyu recovered core samples from 2466 meters below sea floor (mbsf) in IODP Exp. 337, and drilled to 3058.5 mbsf in IODP Exp. 348, but these are still not the limit of Chikyu's capability. As deep as these depths are, they are just halfway to the 5200 mbsf plate boundary target for the NanTroSEIZE deep riser borehole. There are several active IODP proposals in the pipeline. Each has scientific targets requiring several thousand meters of penetration below the sea floor. Riser technology is the only way to collect samples and data from that depth. Well logging has been enhanced with the adoption of riser drilling, especially for logging-while-drilling (LWD). LWD has several advantages over wireline logging, and provides more opportunities for continuous measurements even in unstable boreholes. Because of the larger diameter of riser pipes and enhanced borehole stability, Chikyu can use several state-of-the-art downhole tools, e.g. fracture tester, fluid sampling tool, wider borehole imaging, and the latest sonic tools. These new technologies and tools can potentially expand the envelope of scientific ocean drilling. Chikyu gives us access to ultra-deep water riserless drilling. IODP Exp. 343/343T investigating the March 2011 Tohoku Oki Earthquake, explored the toe of the landward slope of the Japan Trench. This expedition reached the plate boundary fault target at more than 800 mbsf in water depths over 6900 m for logging-while-drilling, coring, and observatory installation. This deep-water drilling capability also expands the scientific ocean drilling envelope and provides access to previously unreachable targets. On top of these operational capabilities, Chikyu's onboard laboratory is equipped with state-of-the-art instruments to analyze all science samples. X-ray CT creates non-destructive 3D images of core samples providing high resolution structural detail. The microbiology laboratory offers clean and contamination-free work environments required for microbiological samples.

77 FR 46338 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Vessels Using...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-03

.... 111207737-2141-02] RIN 0648-XC142 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...: NMFS is prohibiting directed fishing for species that comprise the deep-water species fishery by... apportionment of the Pacific halibut bycatch allowance specified for the deep-water species fishery in the GOA...

78 FR 30242 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Vessels Using...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-22

.... 120918468-3111-02] RIN 0648-XC675 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...: NMFS is prohibiting directed fishing for species that comprise the deep-water species fishery by... apportionment of the Pacific halibut bycatch allowance specified for the deep-water species fishery in the GOA...

75 FR 38937 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Catcher...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-07

... directed fishing for the deep-water species fisheries. DATES: Effective 1200 hrs, Alaska local time (A.l.t.... 0910131362-0087-02] RIN 0648-XX32 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...: NMFS is prohibiting directed fishing for species that comprise the deep-water species fishery for...

76 FR 39790 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Catcher...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-07

... directed fishing for the deep-water species fisheries. DATES: Effective 1200 hrs, Alaska local time (A.l.t.... 101126522-0640-02] RIN 0648-XA536 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...: NMFS is prohibiting directed fishing for species that comprise the deep-water species fishery for...

75 FR 23189 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Vessels Using...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-03

.... 0910131362-0087-02] RIN 0648-XW20 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...: NMFS is prohibiting directed fishing for species that comprise the deep-water species fishery by... apportionment of the Pacific halibut bycatch allowance specified for the deep-water species fishery in the GOA...

77 FR 24154 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Vessels Using...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-23

.... 111207737-2141-02] RIN 0648-XC001 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...: NMFS is prohibiting directed fishing for species that comprise the deep-water species fishery by... apportionment of the Pacific halibut bycatch allowance specified for the deep-water species fishery in the GOA...

76 FR 23511 - Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species Fishery by Vessels Using...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-04-27

.... 101126522-0640-02] RIN 0648-XA394 Fisheries of the Economic Exclusive Zone Off Alaska; Deep-Water Species...: NMFS is prohibiting directed fishing for species that comprise the deep-water species fishery by... apportionment of the Pacific halibut bycatch allowance specified for the deep-water species fishery in the GOA...

Enhanced particle fluxes and heterotrophic bacterial activities in Gulf of Mexico bottom waters following storm-induced sediment resuspension

NASA Astrophysics Data System (ADS)

Ziervogel, K.; Dike, C.; Asper, V.; Montoya, J.; Battles, J.; D`souza, N.; Passow, U.; Diercks, A.; Esch, M.; Joye, S.; Dewald, C.; Arnosti, C.

2016-07-01

Bottom nepheloid layers (BNLs) in the deep sea transport and remobilize considerable amounts of particulate matter, enhancing microbial cycling of organic matter in cold, deep water environments. We measured bacterial abundance, bacterial protein production, and activities of hydrolytic enzymes within and above a BNL that formed in the deep Mississippi Canyon, northern Gulf of Mexico, shortly after Hurricane Isaac had passed over the study area in late August 2012. The BNL was detected via beam attenuation in CTD casts over an area of at least 3.5 km2, extending up to 200 m above the seafloor at a water depth of 1500 m. A large fraction of the suspended matter in the BNL consisted of resuspended sediments, as indicated by high levels of lithogenic material collected in near-bottom sediment traps shortly before the start of our sampling campaign. Observations of suspended particle abundance and sizes throughout the water column, using a combined camera-CTD system (marine snow camera, MSC), revealed the presence of macroaggregates (>1 mm in diameter) within the BNL, indicating resuspension of canyon sediments. A distinct bacterial response to enhanced particle concentrations within the BNL was evident from the observation that the highest enzymatic activities (peptidase, β-glucosidase) and protein production (3H-leucine incorporation) were found within the most particle rich sections of the BNL. To investigate the effects of enhanced particle concentrations on bacterial activities in deep BNLs more directly, we conducted laboratory experiments with roller bottles filled with bottom water and amended with experimentally resuspended sediments from the study area. Macroaggregates formed within 1 day from resuspended sediments; by day 4 of the incubation bacterial cell numbers in treatments with resuspended sediments were more than twice as high as in those lacking sediment suspensions. Cell-specific enzymatic activities were also generally higher in the sediment-amended compared to the unamended treatments. The broader range and higher activities of polysaccharide hydrolases in the presence of resuspended sediments compared to the unamended water reflected enzymatic capabilities typical for benthic bacteria. Our data suggest that the formation of BNLs in the deep Gulf of Mexico can lead to transport of sedimentary organic matter into bottom waters, stimulating bacterial food web interactions. Such storm-induced resuspension may represent a possible mechanism for the redistribution of sedimented oil-fallout from the Deepwater Horizon spill in 2010.

Earth observations taken from shuttle orbiter Columbia

NASA Image and Video Library

1995-10-27

STS073-702-051 (27 October 1995) --- Photographed by the crew aboard the Space Shuttle Columbia, this detailed scene of East Caicos Island highlights the shallow tropical waters typical of the Bahamas region. The contrast between the light blue shallow water and dark blue deep water marks a sharp difference (hundreds of meters) in water depth. The shallow marine regions include sandbars and tidal channels (just right of center). The coastline of the island is low and swampy, and is also greatly influenced by the tides. Further offshore, the darker regions in the slightly deeper watermark sea grass and algae beds. This sensitive submarine environment can be mapped from space because the waters are so clear. Chains of clouds forming off islands and headlands, mark the downwind direction.

Recharge in semiarid mountain environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gross, G.W.

A systematic investigation of tritium activity in precipitation, surface water, springs, and ground water of the Roswell artesian basin in New Mexico, has been supplemented by hydrogeologic reconnaissance of spring systems; by various statistical correlations and spectral analysis of stream flow and water level records of observation wells; by spring discharge measurements; by stable isotope determinations (oxygen 18 and deuterium); and by numerical modeling of part of the basin. Two recharge contributions to the Principal or Carbonate Aquifer have been distinguished principally on the basis of their tritium label and aquifer response characteristics. Almost all basin waters (including deep groundmore » water) fall close to the meteoric line of hydrogen/oxygen isotope composition, and this rules out a juvenile origin or appreciable bedrock interaction.« less

Cenozoic climate change and diversification on the continental shelf and slope: evolution of gastropod diversity in the family Solariellidae (Trochoidea).

PubMed

Williams, S T; Smith, L M; Herbert, D G; Marshall, B A; Warén, A; Kiel, S; Dyal, P; Linse, K; Vilvens, C; Kano, Y

2013-04-01

Recent expeditions have revealed high levels of biodiversity in the tropical deep-sea, yet little is known about the age or origin of this biodiversity, and large-scale molecular studies are still few in number. In this study, we had access to the largest number of solariellid gastropods ever collected for molecular studies, including many rare and unusual taxa. We used a Bayesian chronogram of these deep-sea gastropods (1) to test the hypothesis that deep-water communities arose onshore, (2) to determine whether Antarctica acted as a source of diversity for deep-water communities elsewhere and (3) to determine how factors like global climate change have affected evolution on the continental slope. We show that although fossil data suggest that solariellid gastropods likely arose in a shallow, tropical environment, interpretation of the molecular data is equivocal with respect to the origin of the group. On the other hand, the molecular data clearly show that Antarctic species sampled represent a recent invasion, rather than a relictual ancestral lineage. We also show that an abrupt period of global warming during the Palaeocene Eocene Thermal Maximum (PETM) leaves no molecular record of change in diversification rate in solariellids and that the group radiated before the PETM. Conversely, there is a substantial, although not significant increase in the rate of diversification of a major clade approximately 33.7 Mya, coinciding with a period of global cooling at the Eocene-Oligocene transition. Increased nutrients made available by contemporaneous changes to erosion, ocean circulation, tectonic events and upwelling may explain increased diversification, suggesting that food availability may have been a factor limiting exploitation of deep-sea habitats. Tectonic events that shaped diversification in reef-associated taxa and deep-water squat lobsters in central Indo-West Pacific were also probably important in the evolution of solariellids during the Oligo-Miocene.

Cenozoic climate change and diversification on the continental shelf and slope: evolution of gastropod diversity in the family Solariellidae (Trochoidea)

PubMed Central

Williams, S T; Smith, L M; Herbert, D G; Marshall, B A; Warén, A; Kiel, S; Dyal, P; Linse, K; Vilvens, C; Kano, Y

2013-01-01

Recent expeditions have revealed high levels of biodiversity in the tropical deep-sea, yet little is known about the age or origin of this biodiversity, and large-scale molecular studies are still few in number. In this study, we had access to the largest number of solariellid gastropods ever collected for molecular studies, including many rare and unusual taxa. We used a Bayesian chronogram of these deep-sea gastropods (1) to test the hypothesis that deep-water communities arose onshore, (2) to determine whether Antarctica acted as a source of diversity for deep-water communities elsewhere and (3) to determine how factors like global climate change have affected evolution on the continental slope. We show that although fossil data suggest that solariellid gastropods likely arose in a shallow, tropical environment, interpretation of the molecular data is equivocal with respect to the origin of the group. On the other hand, the molecular data clearly show that Antarctic species sampled represent a recent invasion, rather than a relictual ancestral lineage. We also show that an abrupt period of global warming during the Palaeocene Eocene Thermal Maximum (PETM) leaves no molecular record of change in diversification rate in solariellids and that the group radiated before the PETM. Conversely, there is a substantial, although not significant increase in the rate of diversification of a major clade approximately 33.7 Mya, coinciding with a period of global cooling at the Eocene–Oligocene transition. Increased nutrients made available by contemporaneous changes to erosion, ocean circulation, tectonic events and upwelling may explain increased diversification, suggesting that food availability may have been a factor limiting exploitation of deep-sea habitats. Tectonic events that shaped diversification in reef-associated taxa and deep-water squat lobsters in central Indo-West Pacific were also probably important in the evolution of solariellids during the Oligo-Miocene. PMID:23610633

Cosmonaut Yuriy Onufriyenko simulates parachute drop into water

NASA Image and Video Library

1994-10-13

S94-47232 (13 Oct 1994) --- Cosmonaut Yuriy I. Onufriyenko (right), in the United States to participate in training for joint Russia-United States space missions, simulates a parachute drop into water. The training took place in the Johnson Space Center's (JSC) Weightless Environment Training Facility (WET-F) because it contains a 25-feet-deep pool. Onufriyenko, a Mir reserve team member, and a number of other cosmonauts and astronauts participating in the joint program were in Houston, Texas to prepare for upcoming missions which involve crewmembers from the two nations.

Analysis of wind-driven ambient noise in a shallow water environment with a sandy seabed.

PubMed

Knobles, D P; Joshi, S M; Gaul, R D; Graber, H C; Williams, N J

2008-09-01

On the New Jersey continental shelf ambient sound levels were recorded during tropical storm Ernesto that produced wind speeds up to 40 knots in early September 2006. The seabed at the position of the acoustic measurements can be approximately described as coarse sand. Differences between the ambient noise levels for the New Jersey shelf measurements and deep water reference measurements are modeled using both normal mode and ray methods. The analysis is consistent with a nonlinear frequency dependent seabed attenuation for the New Jersey site.

Seven new species of the genus Xestoleberis (Ostracoda: Podocopida: Cytheroidea) from the Fiji Archipelago.

PubMed

Chand, Prerna; Kamiya, Takahiro

2016-12-18

The genus Xestoleberis has a global distribution, and although they are predominant in shallow marine environments adapted to both sediment and algal habitats, only two species of this genus, Xestoleberis curta (Brady, 1866) and Xestoleberis variegata Brady, 1880, have previously been reported from the Fiji archipelago. Herein we report seven new species of the genus Xestoleberis from intertidal environments of fringing reef flats of the Fiji Islands: Xestoleberis becca n. sp., Xestoleberis concava n. sp., Xestoleberis gracilariaii n. sp., Xestoleberis marcula n. sp., Xestoleberis natuvuensis n. sp., Xestoleberis penna n. sp. and Xestoleberis petrosa n. sp. With the exception of X. becca n. sp., Xestoleberis species show restricted distribution within Fijian waters. The possible causes for their distribution patterns are suggested to be physical barriers imposed by the fast flowing Bligh Water currents, and islands separated by deep ocean waters.

Sulfate Reduction and Sulfide Biomineralization By Deep-Sea Hydrothermal Vent Microorganisms

NASA Astrophysics Data System (ADS)

Picard, A.; Gartman, A.; Clarke, D. R.; Girguis, P. R.

2014-12-01

Deep-sea hydrothermal vents are characterized by steep temperature and chemical gradients and moderate pressures. At these sites, mesophilic sulfate-reducing bacteria thrive, however their significance for the formation of sulfide minerals is unknown. In this study we investigated sulfate reduction and sulfide biomineralization by the deep-sea bacterium Desulfovibrio hydrothermalis isolated from a deep-sea vent chimney at the Grandbonum vent site (13°N, East Pacific Rise, 2600 m water depth) [1]. Sulfate reduction rates were determined as a function of pressure and temperature. Biomineralization of sulfide minerals in the presence of various metal concentrations was characterized using light and electron microscopy and optical spectroscopy. We seek to better understand the significance of biological sulfate reduction in deep-sea hydrothermal environments, to characterize the steps in sulfide mineral nucleation and growth, and identify the interactions between cells and minerals. [1] D. Alazard, S. Dukan, A. Urios, F. Verhe, N. Bouabida, F. Morel, P. Thomas, J.L. Garcia and B. Ollivier, Desulfovibrio hydrothermalis sp. nov., a novel sulfate-reducing bacterium isolated from hydrothermal vents, Int. J. Syst. Evol. Microbiol., 53 (2003) 173-178.

Filamentous fungi isolated from sand and water of "Bairro Novo" and "Casa Caiada" beaches, Olinda, Pernambuco, Brazil.

PubMed

Gomes, D N F; Cavalcanti, M A Q; Fernandes, M J S; Lima, D M M; Passavante, J Z O

2008-08-01

Fungi comprehend a heterogeneous group of heterotrophic microorganisms that act as saprobes or parasites or, less frequently, as symbionts living in association with other organisms. They are cosmopolitan and important components of ecosystems. Considering the small number of Brazilian papers on the filamentous mycota in marine environments, and the need to improve knowledge of the diversity of these microfungi in "Casa Caiada" and "Bairro Novo" beaches, Olinda, PE, the aim of this work was to isolate and identify the fungi from sand and water samples of these ecosystems. Thirty two samplings of sand (surface and 20 cm deep) and water (surface and 1 m deep) were carried out during the dry and rainy seasons, in low and high tide. From each sand sample, a suspension was made with 50 g of sand diluted in 90 mL of sterilized distilled water. From each sand suspension and water sample, 0.5 mL was spread, in triplicate, onto Petri dishes containing Sabouraud Agar added of chloramphenicol. The plates were incubated at 28 degrees C (+/-2 degrees C). Fifty seven species were isolated, identified, and classified in 20 genera. Aspergillus and Penicillium were the most frequent genera in both sand and water, with a total of 11 and 19 species, respectively.

Warming trend in the western Mediterranean deep water

NASA Astrophysics Data System (ADS)

Bethoux, J. P.; Gentili, B.; Raunet, J.; Tailliez, D.

1990-10-01

THE western Mediterranean Sea comprises three water masses: a surface layer (from 0 to ~150 m depth), an intermediate layer (~150-400 m) issuing from the eastern basin, and a deep water mass at depths below 400 m. The deep water is homogeneous and has maintained a more or less constant temperature and salinity from the start of the century until recently1. Here we report measurements from the Medatlante cruises of December 1988 and August 1989, which show the deep layer to be 0.12 °C warmer and ~0.03 p.s.u. more saline than in 1959. Taking these data together with those from earlier cruises, we find a trend of continuously increasing temperatures over the past three decades. These deep-water records reflect the averaged evolution of climate conditions at the surface during the winter, when the deep water is formed. Consideration of the heat budget and water flux in the Mediterranean2,3 leads to the possibility that the deep-water temperature trend may be the result of greenhouse-gas-induced local warming.

Deep-towed high resolution seismic imaging II: Determination of P-wave velocity distribution

NASA Astrophysics Data System (ADS)

Marsset, B.; Ker, S.; Thomas, Y.; Colin, F.

2018-02-01

The acquisition of high resolution seismic data in deep waters requires the development of deep towed seismic sources and receivers able to deal with the high hydrostatic pressure environment. The low frequency piezoelectric transducer of the SYSIF (SYstème Sismique Fond) deep towed seismic device comply with the former requirement taking advantage of the coupling of a mechanical resonance (Janus driver) and a fluid resonance (Helmholtz cavity) to produce a large frequency bandwidth acoustic signal (220-1050 Hz). The ability to perform deep towed multichannel seismic imaging with SYSIF was demonstrated in 2014, yet, the ability to determine P-wave velocity distribution wasn't achieved. P-wave velocity analysis relies on the ratio between the source-receiver offset range and the depth of the seismic reflectors, thus towing the seismic source and receivers closer to the sea bed will provide a better geometry for P-wave velocity determination. Yet, technical issues, related to the acoustic source directivity, arise for this approach in the particular framework of piezoelectric sources. A signal processing sequence is therefore added to the initial processing flow. Data acquisition took place during the GHASS (Gas Hydrates, fluid Activities and Sediment deformations in the western Black Sea) cruise in the Romanian waters of the Black Sea. The results of the imaging processing are presented for two seismic data sets acquired over gas hydrates and gas bearing sediments. The improvement in the final seismic resolution demonstrates the validity of the velocity model.

Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments

PubMed Central

Heidelberg, John F.

2016-01-01

ABSTRACT The South Pacific Gyre (SPG) possesses the lowest rates of sedimentation, surface chlorophyll concentration, and primary productivity in the global oceans. As a direct result, deep-sea sediments are thin and contain small amounts of labile organic carbon. It was recently shown that the entire SPG sediment column is oxygenated and may be representative of up to a third of the global marine environment. To understand the microbial processes that contribute to the removal of the labile organic matter at the water-sediment interface, a sediment sample was collected and subjected to metagenomic sequencing and analyses. Analysis of nine partially reconstructed environmental genomes, which represent approximately one-third of the microbial community, revealed that the members of the SPG surface sediment microbial community are phylogenetically distinct from surface/upper-ocean organisms. These genomes represent a wide distribution of novel organisms, including deep-branching Alphaproteobacteria, two novel organisms within the Proteobacteria, and new members of the Nitrospirae, Nitrospinae, and candidate phylum NC10. These genomes contain evidence for microbially mediated metal (iron/manganese) oxidation and carbon fixation linked to nitrification. Additionally, despite hypothesized energy limitation, members of the SPG microbial community had motility and chemotaxis genes and possessed mechanisms for the degradation of high-molecular-weight organic matter. This study contributes to our understanding of the metabolic potential of microorganisms in deep-sea oligotrophic sediments and their impact on local carbon geochemistry. IMPORTANCE This research provides insight into the microbial metabolic potential of organisms inhabiting oxygenated deep-sea marine sediments. Current estimates suggest that these environments account for up to a third of the global marine sediment habitat. Nine novel deep-sea microbial genomes were reconstructed from a metagenomic data set and expand the limited number of environmental genomes from deep-sea sediment environments. This research provides phylogeny-linked insight into critical metabolisms, including carbon fixation associated with nitrification, which is assignable to members of the marine group 1 Thaumarchaeota, Nitrospinae, and Nitrospirae and neutrophilic metal (iron/manganese) oxidation assignable to a novel proteobacterium. PMID:27208118

Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments.

PubMed

Tully, Benjamin J; Heidelberg, John F

2016-07-15

The South Pacific Gyre (SPG) possesses the lowest rates of sedimentation, surface chlorophyll concentration, and primary productivity in the global oceans. As a direct result, deep-sea sediments are thin and contain small amounts of labile organic carbon. It was recently shown that the entire SPG sediment column is oxygenated and may be representative of up to a third of the global marine environment. To understand the microbial processes that contribute to the removal of the labile organic matter at the water-sediment interface, a sediment sample was collected and subjected to metagenomic sequencing and analyses. Analysis of nine partially reconstructed environmental genomes, which represent approximately one-third of the microbial community, revealed that the members of the SPG surface sediment microbial community are phylogenetically distinct from surface/upper-ocean organisms. These genomes represent a wide distribution of novel organisms, including deep-branching Alphaproteobacteria, two novel organisms within the Proteobacteria, and new members of the Nitrospirae, Nitrospinae, and candidate phylum NC10. These genomes contain evidence for microbially mediated metal (iron/manganese) oxidation and carbon fixation linked to nitrification. Additionally, despite hypothesized energy limitation, members of the SPG microbial community had motility and chemotaxis genes and possessed mechanisms for the degradation of high-molecular-weight organic matter. This study contributes to our understanding of the metabolic potential of microorganisms in deep-sea oligotrophic sediments and their impact on local carbon geochemistry. This research provides insight into the microbial metabolic potential of organisms inhabiting oxygenated deep-sea marine sediments. Current estimates suggest that these environments account for up to a third of the global marine sediment habitat. Nine novel deep-sea microbial genomes were reconstructed from a metagenomic data set and expand the limited number of environmental genomes from deep-sea sediment environments. This research provides phylogeny-linked insight into critical metabolisms, including carbon fixation associated with nitrification, which is assignable to members of the marine group 1 Thaumarchaeota, Nitrospinae, and Nitrospirae and neutrophilic metal (iron/manganese) oxidation assignable to a novel proteobacterium. Copyright © 2016 Tully and Heidelberg.

Methane Seep in Shallow-Water Permeable Sediment Harbors High Diversity of Anaerobic Methanotrophic Communities, Elba, Italy

PubMed Central

Ruff, S. Emil; Kuhfuss, Hanna; Wegener, Gunter; Lott, Christian; Ramette, Alban; Wiedling, Johanna; Knittel, Katrin; Weber, Miriam

2016-01-01

The anaerobic oxidation of methane (AOM) is a key biogeochemical process regulating methane emission from marine sediments into the hydrosphere. AOM is largely mediated by consortia of anaerobic methanotrophic archaea (ANME) and sulfate-reducing bacteria (SRB), and has mainly been investigated in deep-sea sediments. Here we studied methane seepage at four spots located at 12 m water depth in coastal, organic carbon depleted permeable sands off the Island of Elba (Italy). We combined biogeochemical measurements, sequencing-based community analyses and in situ hybridization to investigate the microbial communities of this environment. Increased alkalinity, formation of free sulfide and nearly stoichiometric methane oxidation and sulfate reduction rates up to 200 nmol g-1 day-1 indicated the predominance of sulfate-coupled AOM. With up to 40 cm thickness the zones of AOM activity were unusually large and occurred in deeper sediment horizons (20–50 cm below seafloor) as compared to diffusion-dominated deep-sea seeps, which is likely caused by advective flow of pore water due to the shallow water depth and permeability of the sands. Hydrodynamic forces also may be responsible for the substantial phylogenetic and unprecedented morphological diversity of AOM consortia inhabiting these sands, including the clades ANME-1a/b, ANME-2a/b/c, ANME-3, and their partner bacteria SEEP-SRB1a and SEEP-SRB2. High microbial dispersal, the availability of diverse energy sources and high habitat heterogeneity might explain that the emission spots shared few microbial taxa, despite their physical proximity. Although the biogeochemistry of this shallow methane seep was very different to that of deep-sea seeps, their key functional taxa were very closely related, which supports the global dispersal of key taxa and underlines strong selection by methane as the predominant energy source. Mesophilic, methane-fueled ecosystems in shallow-water permeable sediments may comprise distinct microbial habitats due to their unique biogeochemical and physical characteristics. To link AOM phylotypes with seep habitats and to enable future meta-analyses we thus propose that seep environment ontology needs to be further specified. PMID:27065954

Methane Seep in Shallow-Water Permeable Sediment Harbors High Diversity of Anaerobic Methanotrophic Communities, Elba, Italy.

PubMed

Ruff, S Emil; Kuhfuss, Hanna; Wegener, Gunter; Lott, Christian; Ramette, Alban; Wiedling, Johanna; Knittel, Katrin; Weber, Miriam

2016-01-01

The anaerobic oxidation of methane (AOM) is a key biogeochemical process regulating methane emission from marine sediments into the hydrosphere. AOM is largely mediated by consortia of anaerobic methanotrophic archaea (ANME) and sulfate-reducing bacteria (SRB), and has mainly been investigated in deep-sea sediments. Here we studied methane seepage at four spots located at 12 m water depth in coastal, organic carbon depleted permeable sands off the Island of Elba (Italy). We combined biogeochemical measurements, sequencing-based community analyses and in situ hybridization to investigate the microbial communities of this environment. Increased alkalinity, formation of free sulfide and nearly stoichiometric methane oxidation and sulfate reduction rates up to 200 nmol g(-1) day(-1) indicated the predominance of sulfate-coupled AOM. With up to 40 cm thickness the zones of AOM activity were unusually large and occurred in deeper sediment horizons (20-50 cm below seafloor) as compared to diffusion-dominated deep-sea seeps, which is likely caused by advective flow of pore water due to the shallow water depth and permeability of the sands. Hydrodynamic forces also may be responsible for the substantial phylogenetic and unprecedented morphological diversity of AOM consortia inhabiting these sands, including the clades ANME-1a/b, ANME-2a/b/c, ANME-3, and their partner bacteria SEEP-SRB1a and SEEP-SRB2. High microbial dispersal, the availability of diverse energy sources and high habitat heterogeneity might explain that the emission spots shared few microbial taxa, despite their physical proximity. Although the biogeochemistry of this shallow methane seep was very different to that of deep-sea seeps, their key functional taxa were very closely related, which supports the global dispersal of key taxa and underlines strong selection by methane as the predominant energy source. Mesophilic, methane-fueled ecosystems in shallow-water permeable sediments may comprise distinct microbial habitats due to their unique biogeochemical and physical characteristics. To link AOM phylotypes with seep habitats and to enable future meta-analyses we thus propose that seep environment ontology needs to be further specified.

Sustainable Life on the Blue Frontier

NASA Astrophysics Data System (ADS)

Helvarg, D.

2002-05-01

Environmental trends such as declining sources of potable fresh-water and the recognized need to restore and give full economic value to natural water recharging services derived from watersheds, forests, wetlands, etc. pose global security issues. Fifty years ago top White House Science and technology advisors saw the solution to future water shortages, not in water conservation but rather in building a series of nuclear powered desalination plants along America's shorelines. This reflected the popular belief that we could compensate for any land-based resource shortfalls in protein, energy and fresh water by turning to the seas, while also using these same waters as dumping sites for our wastes and toxins. The world's largest habitat, the deep seas, are threatened by commercial trawling and deep-drilling for oil and gas, as well as revived interest in deep ocean mineral mining. The collapse of global fisheries suggests a need for restoration of marine wildlife and limited sustainable wild harvests (from a vastly decapitalized fishing fleet) combined with sustainable forms of aquaculture. Ocean mineral mining has proven environmental risks, and we have now begun the shift to mineral substitution using various composites and petrochemical derivatives. My old metal bathtub for example, rather than being replaced, was recently covered with a plastic liner, extending its life for years to come. This would suggest that petroleum is far too valuable a substance needed for the manufacture of things like sailcloth and hot-tubs, to be frittered away as a (climate altering) fuel. Deep ocean drilling technology in the Gulf of Mexico and elsewhere is extending projected oil resources even as it creates new and unmanageable risks both to climate and to the marine environment (as does oil industry interest in mining methane hydrates from the abyssal depths). The role of whale oil in the US economy of the 1850s (as the lubricant of the machine age) and "rock oil" (petroleum) in the 1950s suggest we now have the technological capacity for a new energy transition to non-carbon systems including photovoltaics, wind-turbines, biofuels and hydrogen fuel-cells. A (largely) hydrogen based economy could also lead to a decentralized power grid less vulnerable to terrorism and the increased natural disasters we can expect in the coming greenhouse century. Sustainable development of limited resources and the shift to renewable forms of agriculture, water-planning, energy and other technologies will ultimately depend not simply on earth science, but on a highly political process which will (hopefully) combine the best-available science, and society's values to determine public policy that benefits the long-term interests of our blue planet's varied residents, recognizing that our economy is a fully owned subsidiary of our environment.

Archean deep-water depositional system: interbedded and banded iron formation and clastic turbidites in the Barberton Greenstone Belt, South Africa

NASA Astrophysics Data System (ADS)

Zentner, Danielle; Lowe, Donald

2013-04-01

The 3.23 billion year old sediments in the Barberton greenstone belt, South Africa include some of the world's oldest known deep-water deposits. Unique to this locality are turbidites interbedded with banded iron formation (BIF) and banded ferruginous chert (BFC). This unusual association may provide clues for reconstructing Archean deep-water depositional settings. For our study we examined freshly drilled core in addition to measuring ~500 m of outcrop exposures along road cuts. The stacking pattern follows an overall BIF to BFC to amalgamated turbidite succession, although isolated turbidites do occur throughout the sequence. The turbidites are predominately massive, and capped with thin, normally graded tops that include mud rip-ups, chert plates, and ripples. The lack of internal stratification and the amalgamated character suggests emplacement by surging high-density turbidity currents. Large scours and channels are absent and bedding is tabular: the flows were collapsing with little turbulence reaching the bed. In contrast, field evidence indicates the BIF and BFC most likely precipitated directly out of the water column. Preliminary interpretations indicate the deposits may be related to a pro-deltaic setting. (1) Deltaic systems can generate long-lived, high volume turbidity currents. (2) The contacts between the BIF, BFC, and turbidite successions are gradual and inter-fingered, possibly representing lateral facies relationships similar to modern pro-delta environments. (3) Putative fan delta facies, including amalgamated sandstone and conglomerate, exist stratigraphically updip of the basinal sediments.

A predictive model for turfgrass color and quality evaluation using deep learning and UAV imageries

NASA Astrophysics Data System (ADS)

Phan, Claude; Raheja, Amar; Bhandari, Subodh; Green, Robert L.; Do, Dat

2017-05-01

Millions of Americans come into contact with turfgrass on a daily basis. Often undervalued and seen as visual support stimulus for a larger entity, millions of acres of turfgrass can be found on residential lawns (which also provides an area for recreation), commercial landscape, parks, athletic fields, and golf courses. Besides these uses, turfgrass provides many functional benefits to the environment, such as reducing soil erosion, cooling its surrounding area, and soil carbon sequestration. However, rapidly expanding uses of turfgrass have also raised alarm for natural resources conservation and environmental quality, the largest impact being water consumption. This paper presents a machine learning approach that can assist growers and researchers in determining the overall quality and color rating of turfgrass, thereby assisting in turfgrass management including optimized irrigation water scheduling. Tools from Google and NVIDIA enable models to be trained using deep learning techniques on personal computers or on small form factor processors that can be used aboard small unmanned aerial vehicles (UAVs). The typical evaluation process is a long, laborious process, which is subjective by nature, and thus often exposed to criticism and concern. A computational approach to quality and color assessment will provide faster, accurate, and more consistent ratings, which in turn will help increase irrigation water use efficiency. The overall goal of the ongoing research is to use deep learning techniques and UAV imageries for the turfgrass quality and color assessment and help all the stakeholders to optimize water conservation.

Supercritical bedforms and sedimentary structures from field and core studies, Middle Eocene deep-marine base-of-slope environment, Ainsa Basin, Spanish Pyrenees

NASA Astrophysics Data System (ADS)

Cornard, Pauline; Pickering, Kevin

2017-04-01

In recent years, many researchers have focussed on supercritical- and subcritical-flow deposits using flume-tank experiments (e.g., Cartigny el al., 2011; Postma et al., 2014; Postma and Cartigny, 2014), or from direct observations on presently active deep-water systems (e.g., Hughes et al., 2012). Using outcrop and core examples from a base-of-slope environment in the Middle Eocene Ainsa Basin, Spanish Pyrenees, and with published experimental work, a range of deposits are interpreted as upper-flow regime sedimentary structures. This contribution focusses on the interpretation of several supercritical bedforms (antidunes and chutes-and-pools) observed on the field and upper-flow regime sedimentary structures recognized in cores. The spatial distribution of supercritical-flow deposits obtained from an analysis of field outcrops and core sedimentary logs are evaluated in relation to the depositional environment (channel axis, off-axis, margin and interfan). The frequency distributions of the bed thicknesses are also analysed in relation to supercritical versus subcritical bed-thickness distributions.

STS-39 MS Harbaugh is suspended over JSC's WETF Bldg 29 pool via harness

NASA Image and Video Library

1990-12-07

S90-54763 (7 Dec 1990) --- Astronaut Gregory J. Harbaugh. Mission specialist, participates in emergency egress training. Harbaugh and some of his fellow STS 39 astronauts were in JSC's weightless environment training facility (WET-F). Harbaugh is actually suspended over water. This type training uses the WET-F's 25 ft. deep pool to simulate an ocean parachute landing.

STS-52 Commander Wetherbee floats in life raft during JSC bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Commander James D. Wetherbee, wearing launch and entry suit (LES) and launch and entry helmet (LEH), floats in single person life raft during emergency egress (bailout) training exercises in JSC's Weightless Environment Training Facility (WETF) Bldg 29 pool. The bailout exercises utilize the WETF's 25-foot deep pool as the ocean for this water landing simulation.

The biomass of the deep-sea benthopelagic plankton

NASA Astrophysics Data System (ADS)

Wishner, K. F.

1980-04-01

Deep-sea benthopelagic plankton samples were collected with a specially designed opening-closing net system 10 to 100 m above the bottom in five different oceanic regions at depths from 1000 to 4700 m. Benthopelagic plankton biomasses decrease exponentially with depth. At 1000 m the biomass is about 1% that of the surface zooplankton, at 5000 m about 0.1%. Effects of differences in surface primary productivity on deep-sea plankton biomass are much less than the effect of depth and are detectable only in a few comparisons of extreme oceanic regions. The biomass at 10 m above the bottom is greater than that at 100 m above the bottom (in a three-sample comparison), which could be a consequence of an enriched near-bottom environment. The deep-sea plankton biomass in the Red Sea is anomalously low. This may be due to increased decomposition rates in the warm (22°C) deep Red Sea water, which prevent much detritus from reaching the deep sea. A model of organic carbon utilization in the benthic boundary layer (bottom 100 m), incorporating results from deep-sea sediment trap and respiration studies, indicates that the benthopelagic plankton use only a small amount of the organic carbon flux. A large fraction of the flux is unaccounted for by present estimates of benthic and benthopelagic respiration.

Selective Phylogenetic Analysis Targeted at 16S rRNA Genes of Thermophiles and Hyperthermophiles in Deep-Subsurface Geothermal Environments

PubMed Central

Kimura, Hiroyuki; Sugihara, Maki; Kato, Kenji; Hanada, Satoshi

2006-01-01

Deep-subsurface samples obtained by deep drilling are likely to be contaminated with mesophilic microorganisms in the drilling fluid, and this could affect determination of the community structure of the geothermal microflora using 16S rRNA gene clone library analysis. To eliminate possible contamination by PCR-amplified 16S rRNA genes from mesophiles, a combined thermal denaturation and enzyme digestion method, based on a strong correlation between the G+C content of the 16S rRNA gene and the optimum growth temperatures of most known prokaryotic cultures, was used prior to clone library construction. To validate this technique, hot spring fluid (76°C) and river water (14°C) were used to mimic a deep-subsurface sample contaminated with drilling fluid. After DNA extraction and PCR amplification of the 16S rRNA genes from individual samples separately, the amplified products from river water were observed to be denatured at 82°C and completely digested by exonuclease I (Exo I), while the amplified products from hot spring fluid remained intact after denaturation at 84°C and enzyme digestion with Exo I. DNAs extracted from the two samples were mixed and used as a template for amplification of the 16S rRNA genes. The amplified rRNA genes were denatured at 84°C and digested with Exo I before clone library construction. The results indicated that the 16S rRNA gene sequences from the river water were almost completely eliminated, whereas those from the hot spring fluid remained. PMID:16391020

Chloroflexi CL500-11 Populations That Predominate Deep-Lake Hypolimnion Bacterioplankton Rely on Nitrogen-Rich Dissolved Organic Matter Metabolism and C1 Compound Oxidation.

PubMed

Denef, Vincent J; Mueller, Ryan S; Chiang, Edna; Liebig, James R; Vanderploeg, Henry A

2015-12-18

The Chloroflexi CL500-11 clade contributes a large proportion of the bacterial biomass in the oxygenated hypolimnia of deep lakes worldwide, including the world's largest freshwater system, the Laurentian Great Lakes. Traits that allow CL500-11 to thrive and its biogeochemical role in these environments are currently unknown. Here, we found that a CL500-11 population was present mostly in offshore waters along a transect in ultraoligotrophic Lake Michigan (a Laurentian Great Lake). It occurred throughout the water column in spring and only in the hypolimnion during summer stratification, contributing up to 18.1% of all cells. Genome reconstruction from metagenomic data suggested an aerobic, motile, heterotrophic lifestyle, with additional energy being gained through carboxidovory and methylovory. Comparisons to other available streamlined freshwater genomes revealed that the CL500-11 genome contained a disproportionate number of cell wall/capsule biosynthesis genes and the most diverse spectrum of genes involved in the uptake of dissolved organic matter (DOM) substrates, particularly peptides. In situ expression patterns indicated the importance of DOM uptake and protein/peptide turnover, as well as type I and type II carbon monoxide dehydrogenase and flagellar motility. Its location in the water column influenced its gene expression patterns the most. We observed increased bacteriorhodopsin gene expression and a response to oxidative stress in surface waters compared to its response in deep waters. While CL500-11 carries multiple adaptations to an oligotrophic lifestyle, its investment in motility, its large cell size, and its distribution in both oligotrophic and mesotrophic lakes indicate its ability to thrive under conditions where resources are more plentiful. Our data indicate that CL500-11 plays an important role in nitrogen-rich DOM mineralization in the extensive deep-lake hypolimnion habitat. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Multiple sulfur isotope records at the end-Guadalupian (Permian) at Chaotian, China: Implications for a role of bioturbation in the Phanerozoic sulfur cycle

NASA Astrophysics Data System (ADS)

Saitoh, Masafumi; Ueno, Yuichiro; Matsu'ura, Fumihiro; Kawamura, Tetsuya; Isozaki, Yukio; Yao, Jianxin; Ji, Zhansheng; Yoshida, Naohiro

2017-03-01

A recent study on quadruple sulfur isotopes (32S, 33S, 34S, and 36S) of sedimentary pyrite suggested that the end-Guadalupian extinction was caused by shoaling of the sulfidic deep-water. This scenario is based on the assumption that sulfur isotopic compositions of pyrite from hosting sediments were controlled by benthos activities, thus by the redox conditions of the sedimentary environments. Nonetheless, the relationship between the sulfur isotope records and redox conditions, reconstructed from litho- and bio-facies, are poorly known. In order to examine the effect of bioturbation in sediments, quadruple sulfur isotopic compositions of sedimentary pyrite from the end-Guadalupian succession in Chaotian, South China, were analyzed. Black mudstones of deep-water facies immediately below the extinction horizon have consistently high Δ33S values of ca. +0.079‰, clearly suggesting a sulfate reduction in the anoxic water column. Our new data are consistent with the emergence of a sulfidic deep-water mass prior to the end-Guadalupian extinction; the upwelling of the toxic deep-water may have contributed to the extinction. In contrast, shallow-marine bioclastic limestones with burrows deposited under oxic conditions have negative Δ33S values. This anomalous isotopic signal indicates the mixing of two distinct types of pyrite; one generated during the sulfate reduction in an open system and the other in a closed system. We interpret that bioturbation supplied sulfate in the sediments and promoted sulfate reduction and in-situ sulfide precipitation within the sediments. The negative Δ33S values of oxic sediments in Chaotian are inconsistent with the previous model and demonstrate that the sedimentary sulfur cycle associated with bioturbation was more complicated than previously thought. Our study also implies that, more generally, the role of bioturbation in increasing seawater sulfate concentration in the Phanerozoic may have been overestimated in the previous studies, because bioturbation may have enhanced sulfide burial or sulfur output from the oceans.

Traits and selection strategies to improve root systems and water uptake in water-limited wheat crops.

PubMed

Wasson, A P; Richards, R A; Chatrath, R; Misra, S C; Prasad, S V Sai; Rebetzke, G J; Kirkegaard, J A; Christopher, J; Watt, M

2012-05-01

Wheat yields globally will depend increasingly on good management to conserve rainfall and new varieties that use water efficiently for grain production. Here we propose an approach for developing new varieties to make better use of deep stored water. We focus on water-limited wheat production in the summer-dominant rainfall regions of India and Australia, but the approach is generally applicable to other environments and root-based constraints. Use of stored deep water is valuable because it is more predictable than variable in-season rainfall and can be measured prior to sowing. Further, this moisture is converted into grain with twice the efficiently of in-season rainfall since it is taken up later in crop growth during the grain-filling period when the roots reach deeper layers. We propose that wheat varieties with a deeper root system, a redistribution of branch root density from the surface to depth, and with greater radial hydraulic conductivity at depth would have higher yields in rainfed systems where crops rely on deep water for grain fill. Developing selection systems for mature root system traits is challenging as there are limited high-throughput phenotyping methods for roots in the field, and there is a risk that traits selected in the lab on young plants will not translate into mature root system traits in the field. We give an example of a breeding programme that combines laboratory and field phenotyping with proof of concept evaluation of the trait at the beginning of the selection programme. This would greatly enhance confidence in a high-throughput laboratory or field screen, and avoid investment in screens without yield value. This approach requires careful selection of field sites and years that allow expression of deep roots and increased yield. It also requires careful selection and crossing of germplasm to allow comparison of root expression among genotypes that are similar for other traits, especially flowering time and disease and toxicity resistances. Such a programme with field and laboratory evaluation at the outset will speed up delivery of varieties with improved root systems for higher yield.

Deep formation waters of Western Europe, Russia and North America characterised by sodium, calcium, magnesium and chloride concentrations

NASA Astrophysics Data System (ADS)

Bozau, Elke; Hemme, Christina; Sattler, Carl-Diedrich; van Berk, Wolfgang

2015-04-01

Deep formation water can be classified according to depth, temperature, and salinity (e.g., Graf et al. 1966, Kharaka & Hanor 2007). Most of the deep formation waters contain dissolved solids in excess of sea water. The hydrogeochemical development of formation water has been discussed for a long time. It is widely accepted that deep aquifers are influenced by the meteoric cycle and geochemical processes within the crust (e.g., Hebig et al. 2012). Similar hydrogeochemical signatures are found in deep formation waters of all continents and can be explained by general geochemical processes within the deep reservoirs (e.g., Land 1995). Therefore, data of deep formation waters from Western Europe, Russia, and North America are collected and classified by the major water components. The data are used to identify important hydrogeochemical processes (e.g., halite dissolution and albitisation) leading to different compositions of formation water. Two significant water types are identified: Na-Cl water and Na-Ca-Cl water. Based on the collected hydrogeochemical data, development trends are stated for the formation waters, and albitisation is favoured as the main process for calcium enrichment. Furthermore, differences of formation water according to stratigraphical units are shown for deep reservoirs of the North German Basin and the North Sea. References: Graf, D.L., 1982. Chemical osmosis, reverse chemical osmosis, and the origin of subsurface brines. Geochimica Cosmochimica Acta 46, 1431-1448. Hebig, K.H., Ito, N., Scheytt, T., Marui, A., 2012. Review: Deep groundwater research with focus on Germany. Hydrogeology Journal 20, 227-243. Kharaka, Y.K., Hanor, J.S., 2007. Deep fluids in continents: I. Sedimentary Basins. Treatise on Geochemistry 5, 1-48. Land, L.S., 1995. The role of saline formation water in the crustal cycling. Aquatic Geochemistry 1, 137-145. Acknowledgements: The presented data are results of the collaborative research program "gebo" (Geothermal energy and high performance drilling), financed by the Ministry of Science and Culture of the Federal State of Lower Saxony and industry partner Baker Hughes Celle.

AVO helps seismic imaging in deepwater environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skidmore, C.; Lindsay, R.O.; Ratcliff, D.

1997-11-03

Amplitude and frequency variations related to offset should be analyzed routinely during interpretation of seismic data acquired in deepwater environments. Amplitude variation with offset (AVO) in three dimensions is the key exploration tool in deep waters of the Gulf of Mexico. But application of the tool requires special care. Three-dimensional AVO helps the interpreter understand stratigraphy and the meaning of amplitude anomalies. Used in conjunction with well log data, it can help the interpreter distinguish amplitudes related to the presence of hydrocarbons from those that result from, for example, rock-property changes within a non-hydrocarbon-bearing layer, such as a shale, ormore » residual gas (fizz water) in high-porosity sands. The paper discusses examples from the Gulf of Mexico, will control application, improving detail, and frequency-dependent analysis.« less

[Effects of deep plowing and mulch in fallow period on soil water and yield of wheat in dryland].

PubMed

Deng, Yan; Gao, Zhi-Qiang; Sun, Min; Zhao, Wei-Feng; Zhao, Hong-Mei; Li, Qing

2014-01-01

A field test was carried out in Qiujialing Village, Wenxi, Shanxi from 2009 to 2011 to study the soil water movement of 0-300 cm layer, yield formation and water use efficiency (WUE) of wheat with deep plowing and mulching the whole ground immediately (no mulch as control) 15 days and 45 days after harvest. The results indicated that deep plowing and mulch in fallow period could improve soil water storage of the 100-180 cm layer before sowing, the soil water storage efficiency in fallow period, and soil water storage from pre-wintering stage to booting stage. Compared with deep plowing 15 days after wheat harvest, deep plowing 45 days after wheat harvest did better in improving soil water storage and water use efficiency, as well as ear number and yield, which was more conducive in the year with more precipitation. Generally, deep plowing and mulching after raining during fallow period could benefit the soil water storage and conservation, thus would be helpful to improve wheat yield in dryland.

Root distribution of Nitraria sibirica with seasonally varying water sources in a desert habitat.

PubMed

Zhou, Hai; Zhao, Wenzhi; Zheng, Xinjun; Li, Shoujuan

2015-07-01

In water-limited environments, the water sources used by desert shrubs are critical to understanding hydrological processes. Here we studied the oxygen stable isotope ratios (δ (18)O) of stem water of Nitraria sibirica as well as those of precipitation, groundwater and soil water from different layers to identify the possible water sources for the shrub. The results showed that the shrub used a mixture of soil water, recent precipitation and groundwater, with shallow lateral roots and deeply penetrating tap (sinker) roots, in different seasons. During the wet period (in spring), a large proportion of stem water in N. sibirica was from snow melt and recent precipitation, but use of these sources declined sharply with the decreasing summer rain at the site. At the height of summer, N. sibirica mainly utilized deep soil water from its tap roots, not only supporting the growth of shoots but also keeping the shallow lateral roots well-hydrated. This flexibility allowed the plants to maintain normal metabolic processes during prolonged periods when little precipitation occurs and upper soil layers become extremely dry. With the increase in precipitation that occurs as winter approaches, the percentage of water in the stem base of a plant derived from the tap roots (deep soil water or ground water) decreased again. These results suggested that the shrub's root distribution and morphology were the most important determinants of its ability to utilize different water sources, and that its adjustment to water availability was significant for acclimation to the desert habitat.

Fluorescence characteristics in the deep waters of South Gulf of México.

PubMed

Schifter, I; Sánchez-Reyna, G; González-Macías, C; Salazar-Coria, L; González-Lozano, C

2017-10-15

Vertical profiles of deep-water fluorescence determined by the chlorophyll sensor, polycyclic aromatic hydrocarbons, biomarkers, and other miscellaneous parameters measured in the southern Gulf of Mexico are reported. In the course of the survey, unexpected deep fluorescences were recorded (>1100m depth) in half of the 40 stations studied, a novel finding in this area of the Gulf. Currently, the deep-water fluorescence phenomenon is not completely understood, however we observe linear correlation between the fluorescence intensity and chlorophyll-α concentrations and coincidence of higher number of hydrocarbonoclastic bacteria in samples collected precisely in the deep-water fluorescence. This information is particularly interesting in relation to the Deepwater Horizon oil spill in 2010, in view that the aftermaths of the spill can be observed till today as oil plumes trapped in deep water layers that may disturb the natural water ecosystem. Copyright © 2017 Elsevier Ltd. All rights reserved.

Identification of Free-Living and Particle-Associated Microbial Communities Present in Hadal Regions of the Mariana Trench.

PubMed

Tarn, Jonathan; Peoples, Logan M; Hardy, Kevin; Cameron, James; Bartlett, Douglas H

2016-01-01

Relatively few studies have described the microbial populations present in ultra-deep hadal environments, largely as a result of difficulties associated with sampling. Here we report Illumina-tag V6 16S rRNA sequence-based analyses of the free-living and particle-associated microbial communities recovered from locations within two of the deepest hadal sites on Earth, the Challenger Deep (10,918 meters below surface-mbs) and the Sirena Deep (10,667 mbs) within the Mariana Trench, as well as one control site (Ulithi Atoll, 761 mbs). Seawater samples were collected using an autonomous lander positioned ~1 m above the seafloor. The bacterial populations within the Mariana Trench bottom water samples were dissimilar to other deep-sea microbial communities, though with overlap with those of diffuse flow hydrothermal vents and deep-subsurface locations. Distinct particle-associated and free-living bacterial communities were found to exist. The hadal bacterial populations were also markedly different from one another, indicating the likelihood of different chemical conditions at the two sites. In contrast to the bacteria, the hadal archaeal communities were more similar to other less deep datasets and to each other due to an abundance of cosmopolitan deep-sea taxa. The hadal communities were enriched in 34 bacterial and 4 archaeal operational taxonomic units (OTUs) including members of the Gammaproteobacteria, Epsilonproteobacteria, Marinimicrobia, Cyanobacteria, Deltaproteobacteria, Gemmatimonadetes, Atribacteria, Spirochaetes, and Euryarchaeota. Sequences matching cultivated piezophiles were notably enriched in the Challenger Deep, especially within the particle-associated fraction, and were found in higher abundances than in other hadal studies, where they were either far less prevalent or missing. Our results indicate the importance of heterotrophy, sulfur-cycling, and methane and hydrogen utilization within the bottom waters of the deeper regions of the Mariana Trench, and highlight novel community features of these extreme habitats.

Identification of Free-Living and Particle-Associated Microbial Communities Present in Hadal Regions of the Mariana Trench

PubMed Central

Tarn, Jonathan; Peoples, Logan M.; Hardy, Kevin; Cameron, James; Bartlett, Douglas H.

2016-01-01

Relatively few studies have described the microbial populations present in ultra-deep hadal environments, largely as a result of difficulties associated with sampling. Here we report Illumina-tag V6 16S rRNA sequence-based analyses of the free-living and particle-associated microbial communities recovered from locations within two of the deepest hadal sites on Earth, the Challenger Deep (10,918 meters below surface-mbs) and the Sirena Deep (10,667 mbs) within the Mariana Trench, as well as one control site (Ulithi Atoll, 761 mbs). Seawater samples were collected using an autonomous lander positioned ~1 m above the seafloor. The bacterial populations within the Mariana Trench bottom water samples were dissimilar to other deep-sea microbial communities, though with overlap with those of diffuse flow hydrothermal vents and deep-subsurface locations. Distinct particle-associated and free-living bacterial communities were found to exist. The hadal bacterial populations were also markedly different from one another, indicating the likelihood of different chemical conditions at the two sites. In contrast to the bacteria, the hadal archaeal communities were more similar to other less deep datasets and to each other due to an abundance of cosmopolitan deep-sea taxa. The hadal communities were enriched in 34 bacterial and 4 archaeal operational taxonomic units (OTUs) including members of the Gammaproteobacteria, Epsilonproteobacteria, Marinimicrobia, Cyanobacteria, Deltaproteobacteria, Gemmatimonadetes, Atribacteria, Spirochaetes, and Euryarchaeota. Sequences matching cultivated piezophiles were notably enriched in the Challenger Deep, especially within the particle-associated fraction, and were found in higher abundances than in other hadal studies, where they were either far less prevalent or missing. Our results indicate the importance of heterotrophy, sulfur-cycling, and methane and hydrogen utilization within the bottom waters of the deeper regions of the Mariana Trench, and highlight novel community features of these extreme habitats. PMID:27242695

Bacterial biomass and activity in the deep waters of the eastern Atlantic—evidence of a barophilic community

NASA Astrophysics Data System (ADS)

Patching, J. W.; Eardly, D.

1997-09-01

Bacterial biomass and activity were investigated in deep waters at two sites in the eastern Atlantic, of similar depth (4560-4800 m), but varying in their nutritional status. The Northern (N) site was eutrophic and subject to a strong seasonal input of surface derived organic matter (phytodetritus) to the sediment. The Southern (S) site was oligotrophic. Deep water at this site does not appear to receive any strong seasonal input. Bacterial numbers in the deep water column at the N site showed no significant seasonal variation but were greater than those at the S site. Deep water bacteria were typically small and free-living. From biovolume determinations, it was estimated that mean concentrations of bacterial organic carbon at depths greater than 500 m were 0.12 (0.03-0.29) μg C 1 -1 and 0.02 (0.01-0.04) μg C 1 -1 at the N and S sites, respectively. Rates of thymidine and leucine incorporation were used as indicators of bacterial activity. Bacterial communities in water in contact with the sediment (SCW; sediment contact water) at both sites (but especially at the S site) were strongly barophilic at in situ temperatures (2.5-4.1°C). The barophilic response of thymidine incorporation was enhanced when SCW samples from the N site were incubated at 11.5°C. It is proposed that this result indicated an elevating effect of pressure on cardinal temperatures and that the SCW community was obligately psychrophilic when unpressurised. Comparison of cell-specific incorporation rates determined under in situ conditions showed bacteria in the SCW to have levels of activity comparable with bacteria from a depth of 150 m. Thymidine incorporation rates were highest in SCW samples taken at the N site in May 1988 and September 1989. Thymidine incorporation by SCW samples taken immediately before (10 April 1994) the main spring-bloom-associated deposition of phytodetritus was significantly lower and comparable with that determined for the oligotrophic S site. The attributes exhibited by the SCW community appeared to be highly localised. We conclude that the bacterial communities of the SCW are active and adapted to their environment. Activity is influenced by the trophic nature of the site and may show temporal changes linked with episodic food supply. We postulate that the existence of such communities is linked to the role of the sediment-water interface as the initial site of deposition of sea-surface derived labile organic material.

Limited hydrologic response to Pleistocene climate change in deep vadose zones - Yucca Mountain, Nevada

USGS Publications Warehouse

Paces, J.B.; Neymark, L.A.; Whelan, J.F.; Wooden, J.L.; Lund, S.P.; Marshall, B.D.

2010-01-01

Understanding the movement of water through thick vadose zones, especially on time scales encompassing long-term climate change, is increasingly important as societies utilize semi-arid environments for both water resources and sites viewed as favorable for long-term disposal or storage of hazardous waste. Hydrologic responses to Pleistocene climate change within a deep vadose zone in the eastern Mojave Desert at Yucca Mountain, Nevada, were evaluated by uranium-series dating of finely layered hyalitic opal using secondary ion mass spectrometry. Opal is present within cm-thick secondary hydrogenic mineral crusts coating floors of lithophysal cavities in fractured volcanic rocks at depths of 200 to 300 m below land surface. Uranium concentrations in opal fluctuate systematically between 5 and 550 μg/g. Age-calibrated profiles of uranium concentration correlate with regional climate records over the last 300,000 years and produce time-series spectral peaks that have distinct periodicities of 100- and 41-ka, consistent with planetary orbital parameters. These results indicate that the chemical compositions of percolating solutions varied in response to near-surface, climate-driven processes. However, slow (micrometers per thousand years), relatively uniform growth rates of secondary opal and calcite deposition spanning several glacial–interglacial climate cycles imply that water fluxes in the deep vadose zone remained low and generally buffered from the large fluctuations in available surface moisture during different climates.

Investigating the ocean generated acoustic/seismic wavefields in NE Atlantic

NASA Astrophysics Data System (ADS)

Le Pape, F.; Bean, C. J.; Craig, D.; Jousset, P.; Donne, S. E.; Möllhoff, M.

2017-12-01

In this study, we look at the comparison of 3D simulations of acoustic and seismic waves propagation with OBS data recorded across the shelf offshore Ireland and out into the Rockall Trough. Real and synthetic observations are combined to characterize both acoustic and seismic wavefields in the marine environment and particularly study secondary microseisms propagation from deep to shallow water to the land. Whereas the recorded OBS data show a strong change in the energy of "noise events" in the primary microseism band from the shelf to the land, the secondary microseism band is associated with stronger signal in the deep water compared to the shelf area. Furthermore, the data also highlight seasonal variations in the seismic and acoustic wavefields likely related to changes in noise source locations. The 3D simulations of acoustic and seismic waves propagation in the Rockall Trough look promising to reconcile deep ocean, shelf and land seismic observations as well as the effect of the water column and sediments thickness on "seismic ambient noise" generation and propagation. For instance, the simulations reveal interesting results on the acoustic/seismic coupling and its implication on the secondary microseisms source origin. This project is part of the Irish Centre for Research in Applied Geoscience (ICRAG), funded under the SFI Research Centres Programme and is co-funded under the European Regional Development Fund.

Analysis of a PAH-degrading bacterial population in subsurface sediments on the Mid-Atlantic Ridge

NASA Astrophysics Data System (ADS)

Shao, Zongze; Cui, Zhisong; Dong, Chunming; Lai, Qiliang; Chen, Liang

2010-05-01

Little is known about the types and concentrations of polycyclic aromatic hydrocarbons (PAHs) existing in the deep-sea subsurface environment, which is believed to be cold, oligothrophic and of high static pressure. PAHs in the upper layers of the water column are unavoidably subjected to degradation while they are deposited to the sea floor and become embedded in the deep-sea sediment. In this report, a high concentration of PAHs was discovered in the sediment 2.7 m beneath the bottom surface at a water depth of 3962 m on the Mid-Atlantic Ridge (MAR). The total concentration of PAHs was 445 ng (g dry wt sediment) -1. Among the seven detected PAHs, the concentrations of phenanthrene (222 ng g -1) and fluorene (79 ng g -1) were relatively high. In addition, PAH-degrading bacteria were found within the sediments. As in a previously detected site on the MAR, in the PAH-enriched region of this site, a bacterium of the genus Cycloclasticus was found to be the predominant isolate detected by PCR-DGGE analysis. In addition, bacteria of the Halomonas, Marinobacter, Alcanivorax, Thalassospira and Maricaulis genera, were also included in the PAH-degrading community. In summary, a high concentration of PAHs was detected in the subsurface of the deep-sea sediment, and once again, the Cycloclasticus bacterium was confirmed to be a ubiquitous marine PAH degrader even in the subsurface marine environment. Considering the abundance of PAHs therein, biodegradation is thus thought to be inactive, probably because of the low temperature, limited oxygen and/or limited nutrients.

The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs

PubMed Central

Lesniewski, Ryan A; Jain, Sunit; Anantharaman, Karthik; Schloss, Patrick D; Dick, Gregory J

2012-01-01

Microorganisms mediate geochemical processes in deep-sea hydrothermal vent plumes, which are a conduit for transfer of elements and energy from the subsurface to the oceans. Despite this important microbial influence on marine geochemistry, the ecology and activity of microbial communities in hydrothermal plumes is largely unexplored. Here, we use a coordinated metagenomic and metatranscriptomic approach to compare microbial communities in Guaymas Basin hydrothermal plumes to background waters above the plume and in the adjacent Carmen Basin. Despite marked increases in plume total RNA concentrations (3–4 times) and microbially mediated manganese oxidation rates (15–125 times), plume and background metatranscriptomes were dominated by the same groups of methanotrophs and chemolithoautotrophs. Abundant community members of Guaymas Basin seafloor environments (hydrothermal sediments and chimneys) were not prevalent in the plume metatranscriptome. De novo metagenomic assembly was used to reconstruct genomes of abundant populations, including Marine Group I archaea, Methylococcaceae, SAR324 Deltaproteobacteria and SUP05 Gammaproteobacteria. Mapping transcripts to these genomes revealed abundant expression of genes involved in the chemolithotrophic oxidation of ammonia (amo), methane (pmo) and sulfur (sox). Whereas amo and pmo gene transcripts were abundant in both plume and background, transcripts of sox genes for sulfur oxidation from SUP05 groups displayed a 10–20-fold increase in plumes. We conclude that the biogeochemistry of Guaymas Basin hydrothermal plumes is mediated by microorganisms that are derived from seawater rather than from seafloor hydrothermal environments such as chimneys or sediments, and that hydrothermal inputs serve as important electron donors for primary production in the deep Gulf of California. PMID:22695860

The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs.

PubMed

Lesniewski, Ryan A; Jain, Sunit; Anantharaman, Karthik; Schloss, Patrick D; Dick, Gregory J

2012-12-01

Microorganisms mediate geochemical processes in deep-sea hydrothermal vent plumes, which are a conduit for transfer of elements and energy from the subsurface to the oceans. Despite this important microbial influence on marine geochemistry, the ecology and activity of microbial communities in hydrothermal plumes is largely unexplored. Here, we use a coordinated metagenomic and metatranscriptomic approach to compare microbial communities in Guaymas Basin hydrothermal plumes to background waters above the plume and in the adjacent Carmen Basin. Despite marked increases in plume total RNA concentrations (3-4 times) and microbially mediated manganese oxidation rates (15-125 times), plume and background metatranscriptomes were dominated by the same groups of methanotrophs and chemolithoautotrophs. Abundant community members of Guaymas Basin seafloor environments (hydrothermal sediments and chimneys) were not prevalent in the plume metatranscriptome. De novo metagenomic assembly was used to reconstruct genomes of abundant populations, including Marine Group I archaea, Methylococcaceae, SAR324 Deltaproteobacteria and SUP05 Gammaproteobacteria. Mapping transcripts to these genomes revealed abundant expression of genes involved in the chemolithotrophic oxidation of ammonia (amo), methane (pmo) and sulfur (sox). Whereas amo and pmo gene transcripts were abundant in both plume and background, transcripts of sox genes for sulfur oxidation from SUP05 groups displayed a 10-20-fold increase in plumes. We conclude that the biogeochemistry of Guaymas Basin hydrothermal plumes is mediated by microorganisms that are derived from seawater rather than from seafloor hydrothermal environments such as chimneys or sediments, and that hydrothermal inputs serve as important electron donors for primary production in the deep Gulf of California.

A new genus of Nanaloricidae (Loricifera) from deep-sea sediments of volcanic origin in the Kilinailau Trench north of Papua New Guinea

NASA Astrophysics Data System (ADS)

Gad, Gunnar

2004-02-01

A new genus and species of Nanaloricidae (Loricifera), Phoeniciloricus simplidigitatus, is described inhabiting fine sand covered by a layer of volcanic ash at a water depth of 1,813 m in the New Ireland Basin near the Kilinailau Trench (north of Papua New Guinea). The described specimen is a postlarva enclosed in a larval exuvium. This is the first report of a species belonging to the Nanaloricidae from the deep sea. This occurrence is surprising, because Nanaloricidae are typical inhabitants of coarse sands in the intertidal or littoral zone. Preference for these shallow water habitats is reflected in many morphological features which characterize the Nanaloricidae, and are not normally found in Loricifera inhabiting fine-grained, clayish, deep-sea bottoms. The postlarva of the new species is characterized by a long narrow mouth tube, an urn-shaped lorica divided into ten plates, and 13 small lorica spikes. Distinguishing features of the Higgins-larva include short spinose toes lacking mucros but having small and slightly enlarged bases, short scalids on the introvert, many thoracic plates arranged in 6-8 rows, numerous small papillate flosculi in the collar and caudal regions, and three pairs of filiform, short locomotory appendages on the ventral side. Some features of the new species, especially of the Higgins-larva, are discussed as adaptations to the deep-sea environment.

North Atlantic Deep Water Production during the Last Glacial Maximum

PubMed Central

Howe, Jacob N. W.; Piotrowski, Alexander M.; Noble, Taryn L.; Mulitza, Stefan; Chiessi, Cristiano M.; Bayon, Germain

2016-01-01

Changes in deep ocean ventilation are commonly invoked as the primary cause of lower glacial atmospheric CO2. The water mass structure of the glacial deep Atlantic Ocean and the mechanism by which it may have sequestered carbon remain elusive. Here we present neodymium isotope measurements from cores throughout the Atlantic that reveal glacial–interglacial changes in water mass distributions. These results demonstrate the sustained production of North Atlantic Deep Water under glacial conditions, indicating that southern-sourced waters were not as spatially extensive during the Last Glacial Maximum as previously believed. We demonstrate that the depleted glacial δ13C values in the deep Atlantic Ocean cannot be explained solely by water mass source changes. A greater amount of respired carbon, therefore, must have been stored in the abyssal Atlantic during the Last Glacial Maximum. We infer that this was achieved by a sluggish deep overturning cell, comprised of well-mixed northern- and southern-sourced waters. PMID:27256826

Southern Ocean bottom water characteristics in CMIP5 models

NASA Astrophysics Data System (ADS)

Heuzé, CéLine; Heywood, Karen J.; Stevens, David P.; Ridley, Jeff K.

2013-04-01

Southern Ocean deep water properties and formation processes in climate models are indicative of their capability to simulate future climate, heat and carbon uptake, and sea level rise. Southern Ocean temperature and density averaged over 1986-2005 from 15 CMIP5 (Coupled Model Intercomparison Project Phase 5) climate models are compared with an observed climatology, focusing on bottom water. Bottom properties are reasonably accurate for half the models. Ten models create dense water on the Antarctic shelf, but it mixes with lighter water and is not exported as bottom water as in reality. Instead, most models create deep water by open ocean deep convection, a process occurring rarely in reality. Models with extensive deep convection are those with strong seasonality in sea ice. Optimum bottom properties occur in models with deep convection in the Weddell and Ross Gyres. Bottom Water formation processes are poorly represented in ocean models and are a key challenge for improving climate predictions.

Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria.

PubMed

Anantharaman, Karthik; Breier, John A; Sheik, Cody S; Dick, Gregory J

2013-01-02

Hydrothermal vents are a well-known source of energy that powers chemosynthesis in the deep sea. Recent work suggests that microbial chemosynthesis is also surprisingly pervasive throughout the dark oceans, serving as a significant CO(2) sink even at sites far removed from vents. Ammonia and sulfur have been identified as potential electron donors for this chemosynthesis, but they do not fully account for measured rates of dark primary production in the pelagic water column. Here we use metagenomic and metatranscriptomic analyses to show that deep-sea populations of the SUP05 group of uncultured sulfur-oxidizing Gammaproteobacteria, which are abundant in widespread and diverse marine environments, contain and highly express genes encoding group 1 Ni, Fe hydrogenase enzymes for H(2) oxidation. Reconstruction of near-complete genomes of two cooccurring SUP05 populations in hydrothermal plumes and deep waters of the Gulf of California enabled detailed population-specific metatranscriptomic analyses, revealing dynamic patterns of gene content and transcript abundance. SUP05 transcripts for genes involved in H(2) and sulfur oxidation are most abundant in hydrothermal plumes where these electron donors are enriched. In contrast, a second hydrogenase has more abundant transcripts in background deep-sea samples. Coupled with results from a bioenergetic model that suggest that H(2) oxidation can contribute significantly to the SUP05 energy budget, these findings reveal the potential importance of H(2) as a key energy source in the deep ocean. This study also highlights the genomic plasticity of SUP05, which enables this widely distributed group to optimize its energy metabolism (electron donor and acceptor) to local geochemical conditions.

Spatial Statistics of Deep-Water Ambient Noise; Dispersion Relations for Sound Waves and Shear Waves

DTIC Science & Technology

2015-09-30

propagation in very fine-grained sediments (silt and clay ). OBJECTIVES 1) The scientific objective of the deep-water ambient noise research is to...forces in silts and clays and the role they play in controlling wave speeds and attenuations. On a 2 quantum mechanical level, these forces are... clays . APPROACH 1) Deep-water ambient noise Three deep-diving, autonomous instrument platforms, known as Deep Sound I, II, & III, have been

Environmental Forensics: Molecular Insight into Oil Spill Weathering Helps Advance High Magnetic Field FT-ICR Mass Spectrometry

NASA Astrophysics Data System (ADS)

McKenna, Amy

2013-03-01

The depletion of terrestrial global oil reserves has shifted oil exploration into offshore and ultra-deep water (> 5000 ft) oil reserves to meet global energy demands. Deep water reservoirs are currently in production in many parts of the world, including the Gulf of Mexico, but production is complicated by the water depth and thick salt caps that challenge reservoir characterization / production. The explosion aboard the Deepwater Horizon in April 2010 resulted in an estimated total release of ~5 million barrels (BP claims that they collected ~1M barrels, for a net release of 4 M) of light, sweet crude oil into the Gulf of Mexico and shifted attention toward the environmental risks associated with offshore oil production. The growing emphasis on deep water and ultra-deep water oil production poses a significant environmental threat, and increased regulations require that oil companies minimize environmental impact to prevent oil spills, and mitigate environmental damage when spills occur. Every oil spill is unique. The molecular transformations that occur to petroleum after contact with seawater depend on the physical and chemical properties of the spilled oil, environmental conditions, and deposition environment. Molecular-level knowledge of the composition, distribution, and total mass of released hydrocarbons is essential to disentangle photo- and bio-degradation, source identification, and long-term environmental impact of hydrocarbons released into the environment. Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) is unsurpassed in its ability to characterize complex mixtures at the level of elemental composition assignment. Only FT-ICR mass spectrometry can routinely achieve the required minimum resolving power necessary to elucidate molecular-level characterization of crude oil. Conversely, the spectral complexity of petroleum facilitates identification of systematic errors in the accumulation, transfer, excitation, and detection events in the FT-ICR experiment. For example, the high density of peaks at each nominal mass unit provides unprecedented insight into how excitation conditions affect ion motion during detection. Aggregated oil (i.e., tar balls, tar mats) that reached the surface exhibits a more than two-fold increase in the total number of detected species, with an increased number of oxygenated species. Principal component analysis (PCA) applied to two possible source oils (contained within the same ship) and weathered samples provide the first application of FT-ICR MS for source identification. Molecular formulae from parent and weathered oil indicate that the lightest petroleum fractions (saturated hydrocarbons) are the most readily oxidized components, and can serve as a template to determine chemical transformations that occur throughout the water column. The ability to differentiate and catalogue compositional changes that occur to oil after its release into the environment relies heavily on gains achieved in nearly all steps in the FT-ICR mass spectral experiment required to accommodate larger ion populations inherent to heavily weathered crude oil. Here, we present the requirement for FT-ICR MS for comprehensive oil spill characterization, and highlight advances made to FT-ICR MS experimental conditions developed from petroleum characterization. Work supported by DMR-06-54118, NSF CHE-10-49753 (RAPID), BP/The Gulf of Mexico Research Initiative, and the State of Florida

49 CFR 195.246 - Installation of pipe in a ditch.

Code of Federal Regulations, 2011 CFR

2011-10-01

... in a ditch must be installed in a manner that minimizes the introduction of secondary stresses and... waters less than 15 feet deep, all offshore pipe in water at least 12 feet deep (3.7 meters) but not more than 200 feet deep (61 meters) deep as measured from the mean low water must be installed so that the...

49 CFR 195.246 - Installation of pipe in a ditch.

Code of Federal Regulations, 2010 CFR

2010-10-01

... in a ditch must be installed in a manner that minimizes the introduction of secondary stresses and... waters less than 15 feet deep, all offshore pipe in water at least 12 feet deep (3.7 meters) but not more than 200 feet deep (61 meters) deep as measured from the mean low water must be installed so that the...

Sequence stratigraphy of the Monterey Formation, Santa Barbara County: Integration of physical, chemical, and biofacies data from outcrop and subsurface

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bohacs, K.M.

1990-05-01

Deep basinal rocks of the Monterey Formation can be allocated to different depositional environments based on an integration of bedding, facies stacking patterns, lithology, biofacies, and inorganic and organic chemistry. These rocks show evidence of systematic changes in depositional environments that can be related to eustatic sea level change and basin evolution. Even deep-basinal environments are affected by changing sea level through changes in circulation patterns and intensities nutrient budgets and dispersal patterns, and location and intensity of the oceanic oxygen minimum. The sequence-stratigraphic framework was constructed based on the physical expression of the outcrop strata and confirmed by typingmore » the outcrop sections to an integrated well-log/seismic grid through outcrop gamma-ray-spectral profiles. Interpretation of a sequence boundary was based on increased proportions of hemipelagic facies, evidence of increased bottom-energy levels above the boundary, and local erosion and relief on the surface. The proportion of shallower water and reworked dinoflagellates increased to a local maximum above the boundary, Downlap surfaces exhibited increased proportions of pelagic facies around the surface, evidence of decreased bottom-energy levels and terrigenous sedimentation rates, and little or no significant erosion on the surface. The proportion of deeper water dinoflagellates increased to a local maximum at or near the downlap surface; there was no evidence of reworked individuals. The detailed sequence-stratigraphic framework makes it possible to the rock properties to genetic processes for construction of predictive models.« less

50 CFR 679.82 - Rockfish Program use caps and sideboard limits.

Code of Federal Regulations, 2013 CFR

2013-10-01

... not participate in directed fishing for arrowtooth flounder, deep-water flatfish, and rex sole in the GOA (or in waters adjacent to the GOA when arrowtooth flounder, deep-water flatfish, and rex sole... authority of all eligible LLP licenses in the catcher/processor sector. (ii) For the deep-water halibut PSC...

50 CFR 679.82 - Rockfish Program use caps and sideboard limits.

Code of Federal Regulations, 2014 CFR

2014-10-01

... not participate in directed fishing for arrowtooth flounder, deep-water flatfish, and rex sole in the GOA (or in waters adjacent to the GOA when arrowtooth flounder, deep-water flatfish, and rex sole... authority of all eligible LLP licenses in the catcher/processor sector. (ii) For the deep-water halibut PSC...

Bottom sediments and pore waters near a hydrothermal vent in Lake Baikal (Frolikha Bay)

USGS Publications Warehouse

Granina, L.Z.; Klerkx, J.; Callender, E.; Leermakers, M.; Golobokova, L.P.

2007-01-01

We discuss the redox environments and the compositions of bottom sediments and sedimentary pore waters in the region of a hydrothermal vent in Frolikha Bay, Lake Baikal. According to our results, the submarine vent and its companion nearby spring on land originate from a common source. The most convincing evidence for their relation comes from the proximity of stable oxygen and hydrogen isotope compositions in pore waters and in the spring water. The isotope composition indicates a meteoric origin of pore waters, but their major- and minor-element chemistry bears imprint of deep water which may seep through permeable faulted crust. Although pore waters near the submarine vent have a specific enrichment in major and minor constituents, hydrothermal discharge at the Baikal bottom causes a minor impact on the lake water chemistry, unlike the case of freshwater geothermal lakes in the East-African Rift and North America. ?? 2007.

Deep, diverse and definitely different: unique attributes of the world's largest ecosystem

NASA Astrophysics Data System (ADS)

Ramirez-Llodra, E.; Brandt, A.; Danovaro, R.; Escobar, E.; German, C. R.; Levin, L. A.; Martinez Arbizu, P.; Menot, L.; Buhl-Mortensen, P.; Narayanaswamy, B. E.; Smith, C. R.; Tittensor, D. P.; Tyler, P. A.; Vanreusel, A.; Vecchione, M.

2010-04-01

The deep sea, the largest biome on Earth, has a series of characteristics that make this environment both distinct from other marine and land ecosystems and unique for the entire planet. This review describes these patterns and processes, from geological settings to biological processes, biodiversity and biogeographical patterns. It concludes with a brief discussion of current threats from anthropogenic activities to deep-sea habitats and their fauna. Investigations of deep-sea habitats and their fauna began in the late 19th Century. In the intervening years, technological developments and stimulating discoveries have promoted deep-sea research and changed our way of understanding life on the planet. Nevertheless, the deep sea is still mostly unknown and current discovery rates of both habitats and species remain high. The geological, physical and geochemical settings of the deep-sea floor and the water column form a series of different habitats with unique characteristics that support specific faunal communities. Since 1840, 27 new habitats/ecosystems have been discovered from the shelf break to the deep trenches and discoveries of new habitats are still happening in the early 21st Century. However, for most of these habitats, the global area covered is unknown or has been only very roughly estimated; an even smaller - indeed, minimal - proportion has actually been sampled and investigated. We currently perceive most of the deep-sea ecosystems as heterotrophic, depending ultimately on the flux on organic matter produced in the overlying surface ocean through photosynthesis. The resulting strong food limitation, thus, shapes deep-sea biota and communities, with exceptions only in reducing ecosystems such as inter alia hydrothermal vents or cold seeps, where chemoautolithotrophic bacteria play the role of primary producers fuelled by chemical energy sources rather than sunlight. Other ecosystems, such as seamounts, canyons or cold-water corals have an increased productivity through specific physical processes, such as topographic modification of currents and enhanced transport of particles and detrital matter. Because of its unique abiotic attributes, the deep sea hosts a specialized fauna. Although there are no phyla unique to deep waters, at lower taxonomic levels the composition of the fauna is distinct from that found in the upper ocean. Amongst other characteristic patterns, deep-sea species may exhibit either gigantism or dwarfism, related to the decrease in food availability with depth. Food limitation on the seafloor and water column is also reflected in the trophic structure of deep-sea communities, which are adapted to low energy availability. In most of the heterotrophic deep-sea settings, the dominant megafauna is composed of detritivores, while filter feeders are abundant in habitats with hard substrata (e.g. mid-ocean ridges, seamounts, canyon walls and coral reefs) and chemoautotrophy through symbiotic relationships is dominant in reducing habitats. Deep-sea biodiversity is among of the highest on the planet, mainly composed of macro and meiofauna, with high evenness. This is true for most of the continental margins and abyssal plains with hot spots of diversity such as seamounts or cold-water corals. However, in some ecosystems with particularly "extreme" physicochemical processes (e.g. hydrothermal vents), biodiversity is low but abundance and biomass are high and the communities are dominated by a few species. Two large-scale diversity patterns have been discussed for deep-sea benthic communities. First, a unimodal relationship between diversity and depth is observed, with a peak at intermediate depths (2000-3000 m), although this is not universal and particular abiotic processes can modify the trend. Secondly, a poleward trend of decreasing diversity has been discussed, but this remains controversial and studies with larger and more robust datasets are needed. Because of the paucity in our knowledge of habitat coverage and species composition, biogeographic studies are mostly based on regional data or on specific taxonomic groups. Recently, global biogeographic provinces for the pelagic and benthic deep ocean have been described, using environmental and, where data were available, taxonomic information. This classification described 30 pelagic provinces and 38 benthic provinces divided into 4 depth ranges, as well as 10 hydrothermal vent provinces. One of the major issues faced by deep-sea biodiversity and biogeographical studies is related to the high number of species new to science that are collected regularly, together with the slow description rates for these new species. Taxonomic coordination at the global scale is particularly difficult but is essential if we are to analyse large diversity and biogeographic trends. Because of their remoteness, anthropogenic impacts on deep-sea ecosystems have not been addressed very thoroughly until recently. The depletion of biological and mineral resources on land and in shallow waters, coupled with technological developments, is promoting the increased interest in services provided by deep-water resources. Although often largely unknown, evidence for the effects of human activities in deep-water ecosystems - such as deep-sea mining, hydrocarbon exploration and exploitation, fishing, dumping and littering - is already accumulating. Because of our limited knowledge of deep-sea biodiversity and ecosystem functioning and because of the specific life-history adaptations of many deep-sea species (e.g. slow growth and delayed maturity), it is essential that the scientific community works closely with industry, conservation organisations and policy makers to develop conservation and management options.

Simulation of deep ventilation in Crater Lake, Oregon, 1951–2099

USGS Publications Warehouse

Wood, Tamara M.; Wherry, Susan A.; Piccolroaz, Sebastiano; Girdner, Scott F

2016-05-04

The frequency of deep ventilation events in Crater Lake, a caldera lake in the Oregon Cascade Mountains, was simulated in six future climate scenarios, using a 1-dimensional deep ventilation model (1DDV) that was developed to simulate the ventilation of deep water initiated by reverse stratification and subsequent thermobaric instability. The model was calibrated and validated with lake temperature data collected from 1994 to 2011. Wind and air temperature data from three general circulation models and two representative concentration pathways were used to simulate the change in lake temperature and the frequency of deep ventilation events in possible future climates. The lumped model air2water was used to project lake surface temperature, a required boundary condition for the lake model, based on air temperature in the future climates.The 1DDV model was used to simulate daily water temperature profiles through 2099. All future climate scenarios projected increased water temperature throughout the water column and a substantive reduction in the frequency of deep ventilation events. The least extreme scenario projected the frequency of deep ventilation events to decrease from about 1 in 2 years in current conditions to about 1 in 3 years by 2100. The most extreme scenario considered projected the frequency of deep ventilation events to be about 1 in 7.7 years by 2100. All scenarios predicted that the temperature of the entire water column will be greater than 4 °C for increasing lengths of time in the future and that the conditions required for thermobaric instability induced mixing will become rare or non-existent.The disruption of deep ventilation by itself does not provide a complete picture of the potential ecological and water quality consequences of warming climate to Crater Lake. Estimating the effect of warming climate on deep water oxygen depletion and water clarity will require careful modeling studies to combine the physical mixing processes affected by the atmosphere with the multitude of factors affecting the growth of algae and corresponding water clarity.

STS-52 backup Payload Specialist Tryggvason during JSC bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, backup Payload Specialist Bjarni V. Tryggvason, wearing launch and entry suit (LES), checks his launch and entry helmet (LEH) fitting prior to participating in emergency egress (bailout) training exercises in JSC's Weightless Environment Training Facility (WETF) Bldg 29. The WETF's 25-ft deep pool will serve as the ocean during this water landing simulation. Tryggvason represents the Canadian Space Agency (CSA).

STS-32 Commander Brandenstein in LES prepares for WETF water egress training

NASA Technical Reports Server (NTRS)

1989-01-01

STS-32 Commander Daniel C. Brandenstein, wearing a launch and entry suit (LES), orange parachute harness and life vest, is briefed on emergency egress procedures in JSC's Weightless Environment Training Facility Bldg 29. The crew used the WETF's nearby 25 ft deep pool for the exercises, which familiarize assigned space shuttle crewmembers with procedures associated with the post-Challenger pole system of emergency egress.

Deep Ocean Circulation and Nutrient Contents from Atlantic-Pacific Gradients of Neodymium and Carbon Isotopes During the Last 1 Ma

NASA Astrophysics Data System (ADS)

Piotrowski, A. M.; Elderfield, H.; Howe, J. N. W.

2014-12-01

The last few million years saw changing boundary conditions to the Earth system which set the stage for bi-polar glaciation and Milankovich-forced glacial-interglacial cycles which dominate Quaternary climate variability. Recent studies have highlighted the relative importance of temperature, ice volume and ocean circulation changes during the Mid-Pleistocene Transition at ~900 ka (Elderfield et al., 2012, Pena and Goldstein, 2014). Reconstructing the history of global deep water mass propagation and its carbon content is important for fully understanding the ocean's role in amplifying Milankovich changes to cause glacial-interglacial transitions. A new foraminiferal-coating Nd isotope record from ODP Site 1123 on the deep Chatham Rise is interpreted as showing glacial-interglacial changes in the bottom water propagation of Atlantic-sourced waters into the Pacific via the Southern Ocean during the last 1 million years. This is compared to globally-distributed bottom water Nd isotope records; including a new deep western equatorial Atlantic Ocean record from ODP Site 929, as well as published records from ODP 1088 and Site 1090 in the South Atlantic (Pena and Goldstein, 2014), and ODP 758 in the deep Indian Ocean (Gourlan et al., 2010). Atlantic-to-Pacific gradients in deep ocean neodymium isotopes are constructed for key time intervals to elucidate changes in deep water sourcing and circulation pathways through the global ocean. Benthic carbon isotopes are used to estimate deep water nutrient contents of deep water masses and constrain locations and modes of deep water formation. References: Elderfield et al. Science 337, 704 (2012) Pena and Goldstein, Science 345, 318 (2014) Gourlan et al., Quaternary Science Reviews 29, 2484-2498 (2010)

Relative Abundance and Diversity of Bacterial Methanotrophs at the Oxic–Anoxic Interface of the Congo Deep-Sea Fan

PubMed Central

Bessette, Sandrine; Moalic, Yann; Gautey, Sébastien; Lesongeur, Françoise; Godfroy, Anne; Toffin, Laurent

2017-01-01

Sitting at ∼5,000 m water depth on the Congo-Angola margin and ∼760 km offshore of the West African coast, the recent lobe complex of the Congo deep-sea fan receives large amounts of fluvial sediments (3–5% organic carbon). This organic-rich sedimentation area harbors habitats with chemosynthetic communities similar to those of cold seeps. In this study, we investigated relative abundance, diversity and distribution of aerobic methane-oxidizing bacteria (MOB) communities at the oxic–anoxic interface of sedimentary habitats by using fluorescence in situ hybridization and comparative sequence analysis of particulate mono-oxygenase (pmoA) genes. Our findings revealed that sedimentary habitats of the recent lobe complex hosted type I and type II MOB cells and comparisons of pmoA community compositions showed variations among the different organic-rich habitats. Furthermore, the pmoA lineages were taxonomically more diverse compared to methane seep environments and were related to those found at cold seeps. Surprisingly, MOB phylogenetic lineages typical of terrestrial environments were observed at such water depth. In contrast, MOB cells or pmoA sequences were not detected at the previous lobe complex that is disconnected from the Congo River inputs. PMID:28487684

High resolution beamforming on large aperture vertical line arrays: Processing synthetic data

NASA Astrophysics Data System (ADS)

Tran, Jean-Marie Q.; Hodgkiss, William S.

1990-09-01

This technical memorandum studies the beamforming of large aperture line arrays deployed vertically in the water column. The work concentrates on the use of high resolution techniques. Two processing strategies are envisioned: (1) full aperture coherent processing which offers in theory the best processing gain; and (2) subaperture processing which consists in extracting subapertures from the array and recombining the angular spectra estimated from these subarrays. The conventional beamformer, the minimum variance distortionless response (MVDR) processor, the multiple signal classification (MUSIC) algorithm and the minimum norm method are used in this study. To validate the various processing techniques, the ATLAS normal mode program is used to generate synthetic data which constitute a realistic signals environment. A deep-water, range-independent sound velocity profile environment, characteristic of the North-East Pacific, is being studied for two different 128 sensor arrays: a very long one cut for 30 Hz and operating at 20 Hz; and a shorter one cut for 107 Hz and operating at 100 Hz. The simulated sound source is 5 m deep. The full aperture and subaperture processing are being implemented with curved and plane wavefront replica vectors. The beamforming results are examined and compared to the ray-theory results produced by the generic sonar model.

Archive of bacterial community in anhydrite crystals from a deep-sea basin provides evidence of past oil-spilling in a benthic environment in the Red Sea

NASA Astrophysics Data System (ADS)

Wang, Yong; Li, Tie Gang; Wang, Meng Ying; Lai, Qi Liang; Li, Jiang Tao; Gao, Zhao Ming; Shao, Zong Ze; Qian, Pei-Yuan

2016-11-01

In deep-sea sediment, the microbes present in anhydrite crystals are potential markers of the past environment. In the Atlantis II Deep, anhydrite veins were produced by mild mixture of calcium-rich hydrothermal solutions and sulfate in the bottom water, which had probably preserved microbial inhabitants in the past seafloor of the Red Sea. In this study, this hypothesis was tested by analyzing the metagenome of an anhydrite crystal sample from the Atlantis II Deep. The estimated age of the anhydrite layer was between 750 and 770 years, which might span the event of hydrothermal eruption into the benthic floor. The 16S/18S rRNA genes in the metagenome were assigned to bacteria, archaea, fungi and even invertebrate species. The dominant species in the crystals was an oil-degrading Alcanivorax borkumensis bacterium, which was not detected in the adjacent sediment layer. Fluorescence microscopy using 16S rRNA and marker gene probes revealed intact cells of the Alcanivorax bacterium in the crystals. A draft genome of A. borkumensis was binned from the metagenome. It contained all functional genes for alkane utilization and the reduction of nitrogen oxides. Moreover, the metagenomes of the anhydrites and control sediment contained aromatic degradation pathways, which were mostly derived from Ochrobactrum sp. Altogether, these results indicate an oxic, oil-spilling benthic environment in the Atlantis II basin of the Red Sea in approximately the 14th century. The original microbial inhabitants probably underwent a dramatic selection process via drastic environmental changes following the formation of an overlying anoxic brine pool in the basin due to hydrothermal activities.

Comparative genomic analysis of oil spill impacts on deep water shipwreck microbiomes in the northern Gulf of Mexico

NASA Astrophysics Data System (ADS)

Hamdan, L. J.; Damour, M.; McGown, C.; Figan, C.; Kassahun, Z.; Blackwell, K.; Horrell, C.; Gillevet, P.

2014-12-01

Shipwrecks serve as artificial reefs in the deep ocean. Because of their inherent diversity compared to their surrounding environment and their random distribution, shipwrecks are ideal ecosystems to study pollution impacts and microbial distribution patterns in the deep biosphere. This study provides a comparative assessment of Deepwater Horizon spill impacts on shipwreck and local sedimentary microbiomes and the synergistic effects of contaminants on these communities and the physical structures that support them. For this study, microbiomes associated with wooden 19th century shipwrecks and World War II era steel shipwrecks in the northern Gulf of Mexico were investigated using next generation sequencing. Samples derived from in situ biofilm monitoring platforms deployed adjacent to 5 shipwrecks for 4 months, and sediment collected from distances ranging from 2-200m from each shipwreck were evaluated for shifts in microbiome structure and gene function relative to proximity to the spill, and oil spill related contaminants in the local environment. The goals of the investigation are to determine impacts to recruitment and community structure at sites located within and outside of areas impacted by the spill. Taxonomic classification of dominant and rare members of shipwreck microbiomes and metabolic information extracted from sequence data yield new understanding of microbial processes associated with site formation. The study provides information on the identity of microbial inhabitants of shipwrecks, their role in site preservation, and impacts of the Deepwater Horizon spill on the primary colonizers of artificial reefs in the deep ocean. This approach could inform about the role of microorganisms in establishment and maintenance of the artificial reef environment, while providing information about ecosystem feedbacks resulting from spills.

Carbon and Neodymium Isotopic Fingerprints of Atlantic Deep Ocean Circulation During the Warm Pliocene

NASA Astrophysics Data System (ADS)

Riesselman, C. R.; Scher, H.; Robinson, M. M.; Dowsett, H. J.; Bell, D. B.

2012-12-01

Earth's future climate may resemble the mid-Piacenzian Age of the Pliocene, a time when global temperatures were sustained within the range predicted for the coming century. Surface and deep water temperature reconstructions and coupled ocean-atmosphere general circulation model simulations by the USGS PRISM (Pliocene Research Interpretation and Synoptic Mapping) Group identify a dramatic North Atlantic warm surface temperature anomaly in the mid-Piacenzian (3.264 - 3.025 Ma), accompanied by increased evaporation. The anomaly is detected in deep waters at 46°S, suggesting enhanced meridional overturning circulation and more southerly penetration of North Atlantic Deep Water (NADW) during the PRISM interval. However deep water temperature proxies are not diagnostic of water mass and some coupled model simulations predict transient decreases in NADW production in the 21st century, presenting a contrasting picture of future climate. We present a new multi-proxy investigation of Atlantic deep ocean circulation during the warm mid-Piacenzian, using δ13C of benthic foraminifera as a proxy for water mass age and the neodymium isotopic composition of fossil fish teeth (ɛNd) as a proxy for water mass source and mixing. This reconstruction utilizes both new and previously published data from DSDP and ODP cores along equatorial (Ceara Rise), southern mid-latitude (Walvis Ridge), and south Atlantic (Meteor Rise/Agulhas Ridge) depth transects. Additional end-member sites in the regions of modern north Atlantic and Southern Ocean deep water formation provide a Pliocene baseline for comparison. δ13C throughout the Atlantic basin is remarkably homogenous during the PRISM interval. δ13C values of Cibicidoides spp. and C. wuellerstorfi largely range between 0‰ and 1‰ at North Atlantic, shallow equatorial, southern mid-latitude, and south Atlantic sites with water depths from 2000-4700 m; both depth and latitudinal gradients are generally small (~0.3‰). However, equatorial Ceara Rise sites below 3500 m diverge, with δ13C values as low as -1.2‰ at ~3.15 Ma. The uniquely negative δ13C values at deep Ceara rise sites suggest that, during PRISM warmth, the oldest Atlantic deep waters may have resided along the modern deep western boundary current, while younger deep water masses were concentrated to the south and east. In the modern Atlantic, the ɛNd value of southern-sourced waters is more radiogenic than that of northern-sourced waters, providing a complimentary means to characterize Pliocene water mass geometry. ɛNd values from shallow (2500 m) and deep (4700 m) Walvis Ridge sites average -10 and -11 respectively; the shallow site is somewhat more radiogenic than published coretop ɛNd (-12), suggesting enhanced Pliocene influence of southern-sourced water masses. Ongoing analytical efforts will fingerprint Piacenzian ɛNd from north and south deep water source regions and will target additional depth transect ɛNd, allowing us to investigate the possibility that "older" carbon isotopic signatures at western equatorial sites reflect entrainment of proto-NADW while "younger" signatures at southern and eastern sites reflect the influence of southern-sourced deep water.

Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems

PubMed Central

Rix, Laura; de Goeij, Jasper M.; Mueller, Christina E.; Struck, Ulrich; Middelburg, Jack J.; van Duyl, Fleur C.; Al-Horani, Fuad A.; Wild, Christian; Naumann, Malik S.; van Oevelen, Dick

2016-01-01

Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21–40% of the mucus carbon and 32–39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments. PMID:26740019

Coral mucus fuels the sponge loop in warm- and cold-water coral reef ecosystems.

PubMed

Rix, Laura; de Goeij, Jasper M; Mueller, Christina E; Struck, Ulrich; Middelburg, Jack J; van Duyl, Fleur C; Al-Horani, Fuad A; Wild, Christian; Naumann, Malik S; van Oevelen, Dick

2016-01-07

Shallow warm-water and deep-sea cold-water corals engineer the coral reef framework and fertilize reef communities by releasing coral mucus, a source of reef dissolved organic matter (DOM). By transforming DOM into particulate detritus, sponges play a key role in transferring the energy and nutrients in DOM to higher trophic levels on Caribbean reefs via the so-called sponge loop. Coral mucus may be a major DOM source for the sponge loop, but mucus uptake by sponges has not been demonstrated. Here we used laboratory stable isotope tracer experiments to show the transfer of coral mucus into the bulk tissue and phospholipid fatty acids of the warm-water sponge Mycale fistulifera and cold-water sponge Hymedesmia coriacea, demonstrating a direct trophic link between corals and reef sponges. Furthermore, 21-40% of the mucus carbon and 32-39% of the nitrogen assimilated by the sponges was subsequently released as detritus, confirming a sponge loop on Red Sea warm-water and north Atlantic cold-water coral reefs. The presence of a sponge loop in two vastly different reef environments suggests it is a ubiquitous feature of reef ecosystems contributing to the high biogeochemical cycling that may enable coral reefs to thrive in nutrient-limited (warm-water) and energy-limited (cold-water) environments.

STS-52 MS Veach and Payload Specialist MacLean during JSC bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Mission Specialist (MS) Charles Lacy Veach (left) and Canadian Payload Specialist Steven G. MacLean listen to a briefing during emergency egress (bailout) training exercises in JSC's Weightless Environment Training Facility (WETF) Bldg 29. Veach and MacLean are fully outfitted in launch and entry suits (LESs), launch and entry helmets (LEHs), parachutes, and water survival equipment including a life jacket. The WETF's 25-ft deep pool will simulate the ocean as the crewmember's prepare for the event of a water landing. MacLean represents the Canadian Space Agency (CSA).

Bottom Backscattering Strengths Measured in Shallow and Deep Water

DTIC Science & Technology

2017-01-18

basically the same experimental set up (Fig. 2-1) as the BBS experiments that form the basis of the shallow-water portion of this report1. Their dates...6 experiments in 5 distinct environments from 1993 to 2005. This report presents the BBS results from these experiments , as well as empirical fits...Test Operations…………………………………………………………..50 B Measured Bottom Backscattering Strengths…………………...……..50 7 CROSS- EXPERIMENT EPL-FIT VALUES (SHALLOW

Transformation of Deep Water Masses Along Lagrangian Upwelling Pathways in the Southern Ocean

NASA Astrophysics Data System (ADS)

Tamsitt, V.; Abernathey, R. P.; Mazloff, M. R.; Wang, J.; Talley, L. D.

2018-03-01

Upwelling of northern deep waters in the Southern Ocean is fundamentally important for the closure of the global meridional overturning circulation and delivers carbon and nutrient-rich deep waters to the sea surface. We quantify water mass transformation along upwelling pathways originating in the Atlantic, Indian, and Pacific and ending at the surface of the Southern Ocean using Lagrangian trajectories in an eddy-permitting ocean state estimate. Recent related work shows that upwelling in the interior below about 400 m depth is localized at hot spots associated with major topographic features in the path of the Antarctic Circumpolar Current, while upwelling through the surface layer is more broadly distributed. In the ocean interior upwelling is largely isopycnal; Atlantic and to a lesser extent Indian Deep Waters cool and freshen while Pacific deep waters are more stable, leading to a homogenization of water mass properties. As upwelling water approaches the mixed layer, there is net strong transformation toward lighter densities due to mixing of freshwater, but there is a divergence in the density distribution as Upper Circumpolar Deep Water tends become lighter and dense Lower Circumpolar Deep Water tends to become denser. The spatial distribution of transformation shows more rapid transformation at eddy hot spots associated with major topography where density gradients are enhanced; however, the majority of cumulative density change along trajectories is achieved by background mixing. We compare the Lagrangian analysis to diagnosed Eulerian water mass transformation to attribute the mechanisms leading to the observed transformation.

Offshore Floating Wind Turbine-driven Deep Sea Water Pumping for Combined Electrical Power and District Cooling

NASA Astrophysics Data System (ADS)

Sant, T.; Buhagiar, D.; Farrugia, R. N.

2014-06-01

A new concept utilising floating wind turbines to exploit the low temperatures of deep sea water for space cooling in buildings is presented. The approach is based on offshore hydraulic wind turbines pumping pressurised deep sea water to a centralised plant consisting of a hydro-electric power system coupled to a large-scale sea water-cooled air conditioning (AC) unit of an urban district cooling network. In order to investigate the potential advantages of this new concept over conventional technologies, a simplified model for performance simulation of a vapour compression AC unit was applied independently to three different systems, with the AC unit operating with (1) a constant flow of sea surface water, (2) a constant flow of sea water consisting of a mixture of surface sea water and deep sea water delivered by a single offshore hydraulic wind turbine and (3) an intermittent flow of deep sea water pumped by a single offshore hydraulic wind turbine. The analysis was based on one year of wind and ambient temperature data for the Central Mediterranean that is known for its deep waters, warm climate and relatively low wind speeds. The study confirmed that while the present concept is less efficient than conventional turbines utilising grid-connected electrical generators, a significant portion of the losses associated with the hydraulic transmission through the pipeline are offset by the extraction of cool deep sea water which reduces the electricity consumption of urban air-conditioning units.

Measurement of long-term outgassing from the materials used on the MSX spacecraft

NASA Astrophysics Data System (ADS)

Boies, Mark T.; Green, B. David; Galica, Gary E.; Uy, O. Manuel; Benson, Richard C.; Silver, David M.; Wood, Bob E.; Lesho, Jeffrey C.; Hall, David F.; Dyer, James S.

2000-09-01

The Midcourse Space Experiment (MSX) spacecraft was specifically designed and processed to minimize contamination. This spacecraft represents a best case scenario of spacecraft induced environment. The contamination instrument suite consisted of 10 sensors for monitoring the gaseous and particulate environment. The Total Pressure Sensor (TPS) has continuously measured the ambient local pressure surrounding MSX since its launch on April 24, 1996. The sensor's primary goal was to monitor the early mission (less than one week) ambient pressure surrounding the spacecraft's optical telescopes and to indicate when environmental conditions were acceptable for opening the protective covers. However, the instrument has illustrated that it is quite robust and has successfully measured the long-term decay of the pressure environment. The primary constituent of the atmosphere is water outgassed from the thermal blankets of the spacecraft. The water-induced environment was expected to rapidly decay over the first few months to levels more closely approaching the natural environment. The data generally shows decay toward this level, however, the pressure is quite variable with time and can be influenced by discrete illumination and spacecraft orbital events. Several experiments conducted yearly indicate that the thermal blankets retain significant quantities of water. The local pressure due to water vapor is shown to increase by a factor of 100 from direct solar illumination. Moreover, the multi-layer construction of the blankets causes them to form a deep reservoir that continues to be a source of water vapor 3+ years into the mission. We will present pressure data from several experiments, each separated by one orbital year, that exhibit these water vapor induced pressure busts. The decay and longevity of these bursts will also be discussed.

Radiation Engineering Analysis of Shielding Materials to Assess Their Ability to Protect Astronauts in Deep Space From Energetic Particle Radiation

NASA Technical Reports Server (NTRS)

Singleterry, R. C.

2013-01-01

An analysis is performed on four typical materials (aluminum, liquid hydrogen, polyethylene, and water) to assess their impact on the length of time an astronaut can stay in deep space and not exceed a design basis radiation exposure of 150 mSv. A large number of heavy lift launches of pure shielding mass are needed to enable long duration, deep space missions to keep astronauts at or below the exposure value with shielding provided by the vehicle. Therefore, vehicle mass using the assumptions in the paper cannot be the sole shielding mechanism for long duration, deep space missions. As an example, to enable the Mars Design Reference Mission 5.0 with a 400 day transit to and from Mars, not including the 500 day stay on the surface, a minimum of 24 heavy lift launches of polyethylene at 89,375 lbm (40.54 tonnes) each are needed for the 1977 galactic cosmic ray environment. With the assumptions used in this paper, a single heavy lift launch of water or polyethylene can protect astronauts for a 130 day mission before exceeding the exposure value. Liquid hydrogen can only protect the astronauts for 160 days. Even a single launch of pure shielding material cannot protect an astronaut in deep space for more than 180 days using the assumptions adopted in the analysis. It is shown that liquid hydrogen is not the best shielding material for the same mass as polyethylene for missions that last longer than 225 days.

High Speed Trimaran (HST) Seatrain Experiments, Model 5714

DTIC Science & Technology

2013-12-01

Marine Highway 1 Historical Seatrains 1 Objectives 2 Hull &: Model Description 4 Data Acquisition and Instrumentation 7 Carriage II - Deep ...Operational Demonstration Measurement System 10 Experimental Procedures 10 Carriage II - Deep Water Basin Test 10 Calm Water Resistance 11... Deep Water Basin Analysis 17 Calm Water Resistance 17 Longitudinal Flow Through The Propeller Plane 18 Body Forces & Moments 18

Deep, diverse and definitely different: unique attributes of the world's largest ecosystem

NASA Astrophysics Data System (ADS)

Ramirez-Llodra, E.; Brandt, A.; Danovaro, R.; de Mol, B.; Escobar, E.; German, C. R.; Levin, L. A.; Martinez Arbizu, P.; Menot, L.; Buhl-Mortensen, P.; Narayanaswamy, B. E.; Smith, C. R.; Tittensor, D. P.; Tyler, P. A.; Vanreusel, A.; Vecchione, M.

2010-09-01

The deep sea, the largest biome on Earth, has a series of characteristics that make this environment both distinct from other marine and land ecosystems and unique for the entire planet. This review describes these patterns and processes, from geological settings to biological processes, biodiversity and biogeographical patterns. It concludes with a brief discussion of current threats from anthropogenic activities to deep-sea habitats and their fauna. Investigations of deep-sea habitats and their fauna began in the late 19th century. In the intervening years, technological developments and stimulating discoveries have promoted deep-sea research and changed our way of understanding life on the planet. Nevertheless, the deep sea is still mostly unknown and current discovery rates of both habitats and species remain high. The geological, physical and geochemical settings of the deep-sea floor and the water column form a series of different habitats with unique characteristics that support specific faunal communities. Since 1840, 28 new habitats/ecosystems have been discovered from the shelf break to the deep trenches and discoveries of new habitats are still happening in the early 21st century. However, for most of these habitats the global area covered is unknown or has been only very roughly estimated; an even smaller - indeed, minimal - proportion has actually been sampled and investigated. We currently perceive most of the deep-sea ecosystems as heterotrophic, depending ultimately on the flux on organic matter produced in the overlying surface ocean through photosynthesis. The resulting strong food limitation thus shapes deep-sea biota and communities, with exceptions only in reducing ecosystems such as inter alia hydrothermal vents or cold seeps. Here, chemoautolithotrophic bacteria play the role of primary producers fuelled by chemical energy sources rather than sunlight. Other ecosystems, such as seamounts, canyons or cold-water corals have an increased productivity through specific physical processes, such as topographic modification of currents and enhanced transport of particles and detrital matter. Because of its unique abiotic attributes, the deep sea hosts a specialized fauna. Although there are no phyla unique to deep waters, at lower taxonomic levels the composition of the fauna is distinct from that found in the upper ocean. Amongst other characteristic patterns, deep-sea species may exhibit either gigantism or dwarfism, related to the decrease in food availability with depth. Food limitation on the seafloor and water column is also reflected in the trophic structure of heterotrophic deep-sea communities, which are adapted to low energy availability. In most of these heterotrophic habitats, the dominant megafauna is composed of detritivores, while filter feeders are abundant in habitats with hard substrata (e.g. mid-ocean ridges, seamounts, canyon walls and coral reefs). Chemoautotrophy through symbiotic relationships is dominant in reducing habitats. Deep-sea biodiversity is among of the highest on the planet, mainly composed of macro and meiofauna, with high evenness. This is true for most of the continental margins and abyssal plains with hot spots of diversity such as seamounts or cold-water corals. However, in some ecosystems with particularly "extreme" physicochemical processes (e.g. hydrothermal vents), biodiversity is low but abundance and biomass are high and the communities are dominated by a few species. Two large-scale diversity patterns have been discussed for deep-sea benthic communities. First, a unimodal relationship between diversity and depth is observed, with a peak at intermediate depths (2000-3000 m), although this is not universal and particular abiotic processes can modify the trend. Secondly, a poleward trend of decreasing diversity has been discussed, but this remains controversial and studies with larger and more robust data sets are needed. Because of the paucity in our knowledge of habitat coverage and species composition, biogeographic studies are mostly based on regional data or on specific taxonomic groups. Recently, global biogeographic provinces for the pelagic and benthic deep ocean have been described, using environmental and, where data were available, taxonomic information. This classification described 30 pelagic provinces and 38 benthic provinces divided into 4 depth ranges, as well as 10 hydrothermal vent provinces. One of the major issues faced by deep-sea biodiversity and biogeographical studies is related to the high number of species new to science that are collected regularly, together with the slow description rates for these new species. Taxonomic coordination at the global scale is particularly difficult, but is essential if we are to analyse large diversity and biogeographic trends.

Search for hydraulic connectivity between surface reservoirs and surrounding aquifers in the reservoir-triggered seismic environment (Koyna region, India) using hydrochemical and isotopic signatures

NASA Astrophysics Data System (ADS)

Reddy, D. V.; Nagabhushanam, P.

2016-01-01

Triggered seismicity is an accepted hypothesis in the present days. However, detailed hydrogeological investigations are lacking in the well-known reservoir-triggered seismic (RTS) zones. Here, we made an attempt to understand the direct linkage between the well-known Koyna-Warna reservoirs believed to be under the RTS zone (situated in the Deccan volcanic province (DVP), India) and the surrounding groundwater system up to 250 m deep from the ground surface. Seismic activity in the region started soon after the impoundment of water in the Koyna reservoir and being continued over the last four and a half decades. Though researchers have carried out numerous studies on the Koyna seismicity, no hydrogeological investigations were attempted. Hence, hydrogeological, hydrochemical, and isotopic investigations were carried out for 7 years on groundwaters from 15 deep bore wells (up to 250 m) and two surface reservoir waters to elucidate the direct hydraulic connectivity between them. No appreciable seasonal change was observed in piezometric heads of the artesian wells, but the semi-artesian wells did show fluctuation of ~2 to 12 m during different years, which did not have any relation with the reservoir water levels. No considerable seasonal change in hydrochemistry was observed in individual wells due to the confined nature of the aquifers. The hydrochemical and δ18O data of the studied deep groundwaters and reservoir waters, being different from each other, rule out the possibility of direct hydraulic connectivity between them and surrounding groundwater (up to 250 m), even though favorable topographic conditions exist for linkage. The radiocarbon ages, being incomparable between different well waters, support the inference drawn from hydrochemistry and stable isotope data.

Matching Deep Tow Camera study and Sea Floor geochemical characterization of gas migration at the Tainan Ridge, South China Sea

NASA Astrophysics Data System (ADS)

Fan, L. F.; Lien, K. L.; Hsieh, I. C.; Lin, S.

2017-12-01

Methane seep in deep sea environment could lead to build up of chemosynthesis communities, and a number of geological and biological anomalies as compare to the surrounding area. In order to examine the linkage between seep anomalies and those at the vicinity background area, and to detail mapping those spatial variations, we used a deep towed camera system (TowCam) to survey seafloor on the Tainan Ridge, Northeastern South China Sea (SCS). The underwater sea floor pictures could provide better spatial variations to demonstrate impact of methane seep on the sea floor. Water column variations of salinity, temperature, dissolved oxygen were applied to delineate fine scale variations at the study area. In addition, sediment cores were collected for chemical analyses to confirm the existence of local spatial variations. Our results show large spatial variations existed as a result of differences in methane flux. In fact, methane is the driving force for the observed biogeochemical variations in the water column, on the sea floor, and in the sediment. Of the area we have surveyed, there are approximately 7% of total towcam survey data showing abnormal water properties. Corresponding to the water column anomalies, underwater sea floor pictures taken from those places showed that chemosynthetic clams and muscles could be identified, together with authigenic carbonate buildups, and bacterial mats. Moreover, sediment cores with chemical anomalies also matched those in the water column and on the sea floor. These anomalies, however, represent only a small portion of the area surveyed and could not be identified with typical (random) coring method. Methane seep, therefore, require tedious and multiple types of surveys to better understand the scale and magnitude of seep and biogeochemical anomalies those were driven by gas migrations.

Plasticity in the Huber value contributes to homeostasis in leaf water relations of a mallee Eucalypt with variation to groundwater depth.

PubMed

Carter, Jennifer L; White, Donald A

2009-11-01

Information on how vegetation adapts to differences in water supply is critical for predicting vegetation survival, growth and water use, which, in turn, has important impacts on site hydrology. Many field studies assess adaptation to water stress by comparing between disparate sites, which makes it difficult to distinguish between physiological or morphological changes and long-term genetic adaptation. When planting trees into new environments, the phenotypic adaptations of a species to water stress will be of primary interest. This study examined the response to water availability of Eucalyptus kochii ssp. borealis (C. Gardner) D. Nicolle, commonly integrated with agriculture in south-western Australia for environmental and economic benefits. By choosing a site where the groundwater depth varied but where climate and soil type were the same, we were able to isolate tree response to water supply. Tree growth, leaf area and stand water use were much larger for trees over shallow groundwater than for trees over a deep water table below a silcrete hardpan. However, water use on a leaf area basis was similar in trees over deep and shallow groundwater, as were the minimum leaf water potential observed over different seasons and the turgor loss point. We conclude that homeostasis in leaf water use and water relations was maintained through a combination of stomatal control and adjustment of sapwood-to-leaf area ratios (Huber value). Differences in the Huber value with groundwater depth were associated with different sapwood-specific conductivity and water use on a sapwood area basis. Knowledge of the coordination between water supply, leaf area, sapwood area and leaf transpiration rate for different species will be important when predicting stand water use.

Water temperature, not fish morph, determines parasite infections of sympatric Icelandic threespine sticklebacks (Gasterosteus aculeatus)

PubMed Central

Karvonen, Anssi; Kristjánsson, Bjarni K; Skúlason, Skúli; Lanki, Maiju; Rellstab, Christian; Jokela, Jukka

2013-01-01

Parasite communities of fishes are known to respond directly to the abiotic environment of the host, for example, to water quality and water temperature. Biotic factors are also important as they affect the exposure profile through heterogeneities in parasite distribution in the environment. Parasites in a particular environment may pose a strong selection on fish. For example, ecological differences in selection by parasites have been hypothesized to facilitate evolutionary differentiation of freshwater fish morphs specializing on different food types. However, as parasites may also respond directly to abiotic environment the parasite risk does not depend only on biotic features of the host environment. It is possible that different morphs experience specific selection gradients by parasites but it is not clear how consistent the selection is when abiotic factors change. We examined parasite pressure in sympatric morphs of threespine stickleback (Gasterosteus aculeatus) across a temperature gradient in two large Icelandic lakes, Myvatn and Thingvallavatn. Habitat-specific temperature gradients in these lakes are opposite. Myvatn lava rock morph lives in a warm environment, while the mud morph lives in the cold. In Thingvallavatn, the lava rock morph lives in a cold environment and the mud morph in a warm habitat. We found more parasites in fish living in higher temperature in both lakes, independent of the fish morph, and this pattern was similar for the two dominating parasite taxa, trematodes and cestodes. However, at the same time, we also found higher parasite abundance in a third morph living in deep cold–water habitat in Thingvallavatn compared to the cold-water lava morph, indicating strong effect of habitat-specific biotic factors. Our results suggest complex interactions between water temperature and biotic factors in determining the parasite community structure, a pattern that may have implications for differentiation of stickleback morphs. PMID:23789063

Marine redox stratification during the early Cambrian (ca. 529-509 Ma) and its control on the development of organic-rich shales in Yangtze Platform

NASA Astrophysics Data System (ADS)

Zhang, Yuying; He, Zhiliang; Jiang, Shu; Gao, Bo; Liu, Zhongbao; Han, Bo; Wang, Hu

2017-06-01

High resolution geochemical data from nine sections representing shelf to basinal environments in the Yangtze Platform were analyzed to reconstruct the marine redox environment during early Cambrian. Based on Fe species and Mo/TOC ratios, we have supplemented marine redox stratification during Stage 4 (late Canglangpuian-Longwangmiaoan, ˜514-509 Ma) on basis of the previously studied Stage 2-Stage 3 (Meishucunian-Qiongzhusian, ˜529-514 Ma). A new proposed marine stratified redox model indicates that the middepth "euxinic wedge" developed at the base of slope during ˜514-509 Ma in contrast to that the "euxinic wedge" prevailed at the shelf margin during ˜529-514 Ma, even though these middepth euxinic waters both occurred between the oxic surface waters and ferruginous deep waters. This marine redox stratification resulted in high production and good preservation of organic matter during early Cambrian. TOC values in euxinic waters in the middle are generally higher than in ferruginous waters due to upwelling in slope. Therefore, the lower Cambrian organic-rich shales in the Yangtze Platform are inferred to be deposited under the anoxic-ferruginous and euxinic bottom waters with moderate-strong restriction.

Sedimentary architecture of a sub-lacustrine debris fan: Eocene Dongying Depression, Bohai Bay Basin, east China

NASA Astrophysics Data System (ADS)

Liu, Jianping; Xian, Benzhong; Wang, Junhui; Ji, Youliang; Lu, Zhiyong; Liu, Saijun

2017-12-01

The sedimentary architectures of submarine/sublacustrine fans are controlled by sedimentary processes, geomorphology and sediment composition in sediment gravity flows. To advance understanding of sedimentary architecture of debris fans formed predominantly by debris flows in deep-water environments, a sub-lacustrine fan (Y11 fan) within a lacustrine succession has been identified and studied through the integration of core data, well logging data and 3D seismic data in the Eocene Dongying Depression, Bohai Bay Basin, east China. Six types of resedimented lithofacies can be recognized, which are further grouped into five broad lithofacies associations. Quantification of gravity flow processes on the Y11 fan is suggested by quantitative lithofacies analysis, which demonstrates that the fan is dominated by debris flows, while turbidity currents and sandy slumps are less important. The distribution, geometry and sedimentary architecture are documented using well data and 3D seismic data. A well-developed depositional lobe with a high aspect ratio is identified based on a sandstone isopach map. Canyons and/or channels are absent, which is probably due to the unsteady sediment supply from delta-front collapse. Distributary tongue-shaped debris flow deposits can be observed at different stages of fan growth, suggesting a lobe constructed by debrite tongue complexes. Within each stage of the tongue complexes, architectural elements are interpreted by wireline log motifs showing amalgamated debrite tongues, which constitute the primary fan elements. Based on lateral lithofacies distribution and vertical sequence analysis, it is proposed that lakefloor erosion, entrainment and dilution in the flow direction lead to an organized distribution of sandy debrites, muddy debrites and turbidites on individual debrite tongues. Plastic rheology of debris flows combined with fault-related topography are considered the major factors that control sediment distribution and fan architecture. An important implication of this study is that a deep-water depositional model for debrite-dominated systems was proposed, which may be applicable to other similar deep-water environments.

Contribution of Microbial Activities To Carbon Cycle In A Deep Sea Ionian Area

NASA Astrophysics Data System (ADS)

Zaccone, R.; Caruso, G.; Azzaro, F.; Azzaro, M.; Decembrini, F.; La Ferla, R.; Leonardi, M.

Main biological process which sustain life in deep environments is the microbial uti- lization of particulated matter. Despite the well known importance of bacterial role in biogeochemical cycles, the rates of microbial processes on organic matter in the Mediterranean Sea, and in particular in the Ionian Sea, are still poorly understood. During winter 1999, water samples were collected at different depths (0-3300m) from six stations along a costal-offshore transect located at 60 miles off Cape Passero (SE Sicily) in the Ionian Sea. Measurements of chlorophyll a, bacterial abundance, ATP and POC enabled the estimation of autotrophic and bacterial contribution to the pool of particulate organic matter. Estimates of microbial leucine-aminopeptidase (LAP) and respiration rates (ETSa) were compared with different water masses identified ac- cording to temperature, salinity and nutrients. Results showed that bacterial biomass contributed to particulated carbon in percentage ranging from 4.57% in surface waters (ISW) to 1.29% in EMDW. Microbial hydrolysis of POC showed higher percentage also in ISW reaching 1.81% and potentially liberating 0.73µg C/l/h (mean values), bioavailable for bacterial growth. The lowest rates of LAP mean values (0.06µg C/l/h) were observed in EMDW with 0.16% of POC potentially hydrolysed. These hydroly- sis rates confirm that during sinking a greater amount of organic matter can not be uti- lized by bacteria and may become refractory. Respiratory rates ranged from 0.118µg C/l/h in MAW to 0.003 µg C/l/h in CDW, with a decreasing trend with depth, indicat- ing low respiration rates with respect to precedent data recorded in deep Mediterranean zones. This research tried of evaluating the carbon flux through the microbial commu- nity and contributed to study some steps of degradative process of organic matter and mineralization to CO2 in relation to the different hydrological characteristics in the Mediterranean changing environment.

In situ trace metal analysis of Neoarchaean--Ordovician shallow-marine microbial-carbonate-hosted pyrites.

PubMed

Gallagher, M; Turner, E C; Kamber, B S

2015-07-01

Pre-Cambrian atmospheric and oceanic redox evolutions are expressed in the inventory of redox-sensitive trace metals in marine sedimentary rocks. Most of the currently available information was derived from deep-water sedimentary rocks (black shale/banded iron formation). Many of the studied trace metals (e.g. Mo, U, Ni and Co) are sensitive to the composition of the exposed land surface and prevailing weathering style, and their oceanic inventory ultimately depends on the terrestrial flux. The validity of claims for increased/decreased terrestrial fluxes has remained untested as far as the shallow-marine environment is concerned. Here, the first systematic study of trace metal inventories of the shallow-marine environment by analysis of microbial carbonate-hosted pyrite, from ca. 2.65-0.52 Ga, is presented. A petrographic survey revealed a first-order difference in preservation of early diagenetic pyrite. Microbial carbonates formed before the 2.4 Ga great oxygenation event (GOE) are much richer in pyrite and contain pyrite grains of greater morphological variability but lesser chemical substitution than samples deposited after the GOE. This disparity in pyrite abundance and morphology is mirrored by the qualitative degree of preservation of organic matter (largely as kerogen). Thus, it seems that in microbial carbonates, pyrite formation and preservation were related to presence and preservation of organic C. Several redox-sensitive trace metals show interpretable temporal trends supporting earlier proposals derived from deep-water sedimentary rocks. Most notably, the shallow-water pyrite confirms a rise in the oceanic Mo inventory across the pre-Cambrian-Cambrian boundary, implying the establishment of efficient deep-ocean ventilation. The carbonate-hosted pyrite also confirms the Neoarchaean and early Palaeoproterozoic ocean had higher Ni concentration, which can now more firmly be attributed to a greater proportion of magnesian volcanic rock on land rather than a stronger hydrothermal flux of Ni. Additionally, systematic trends are reported for Co, As, and Zn, relating to terrestrial flux and oceanic productivity. © 2015 John Wiley & Sons Ltd.

Improving OBS operations in ultra-deep ocean during the Southern Mariana Trench expeditions

NASA Astrophysics Data System (ADS)

Zeng, X.; Lin, J.; Xu, M.; Zhou, Z.

2017-12-01

The Mariana Trench Research Initiative, led by the South China Sea Institute of Oceanology of the Chinese Academy of Sciences and through international collaboration, focuses on investigating the deep and shallow lithospheric structure, earthquake characteristics, extreme geological environments, and the controlling geodynamic mechanisms for the formation of Earth's deepest basins in the southern Mariana Trench. Two multidisciplinary research expeditions were executed during December 2016 and June 2017, respectively, on board R/V Shiyan 3. A main task of the Mariana Initiative is to conduct the Southern Mariana OBS Experiment (SMOE), the first OBS seismic experiment across the Challenger Deep. The SMOE expeditions include both active and passive source seismic experiments and employed a large number of broadband OBS instruments. Due to the deep water, rough weather, strong winds, and other unfavorable factors, it was challenging to deploy/recover the OBSs. During the two expeditions we developed and experimented with a number of ways to improve the success rate of OBS operations in the harsh ultra-deep ocean environment of the Southern Mariana Trench. All newly acquired OBSs underwent a series of uniquely designed deep-ocean tests to improve the instrument performance and maximize reliability during their deployment under the ultra-high pressure conditions. The OBS deployment and recovery followed a unified standard operation procedure and aided by an instrumental checklist, which were specifically designed and strictly enforced for operation during the expeditions. Furthermore, an advanced ship-based radio positioning system was developed to rapidly and accurately locate the OBS instruments when they reached the sea surface; the system proved its effectiveness even under extreme weather conditions. Through the development and application of the novel methods for operation in deep oceans, we overcame the rough sea and other unfavorable factors during the first two expeditions to the southern Mariana Trench and achieved a highly successful OBS operation program.

North Atlantic deep water formation and AMOC in CMIP5 models

NASA Astrophysics Data System (ADS)

Heuzé, Céline

2017-07-01

Deep water formation in climate models is indicative of their ability to simulate future ocean circulation, carbon and heat uptake, and sea level rise. Present-day temperature, salinity, sea ice concentration and ocean transport in the North Atlantic subpolar gyre and Nordic Seas from 23 CMIP5 (Climate Model Intercomparison Project, phase 5) models are compared with observations to assess the biases, causes and consequences of North Atlantic deep convection in models. The majority of models convect too deep, over too large an area, too often and too far south. Deep convection occurs at the sea ice edge and is most realistic in models with accurate sea ice extent, mostly those using the CICE model. Half of the models convect in response to local cooling or salinification of the surface waters; only a third have a dynamic relationship between freshwater coming from the Arctic and deep convection. The models with the most intense deep convection have the warmest deep waters, due to a redistribution of heat through the water column. For the majority of models, the variability of the Atlantic Meridional Overturning Circulation (AMOC) is explained by the volumes of deep water produced in the subpolar gyre and Nordic Seas up to 2 years before. In turn, models with the strongest AMOC have the largest heat export to the Arctic. Understanding the dynamical drivers of deep convection and AMOC in models is hence key to realistically forecasting Arctic oceanic warming and its consequences for the global ocean circulation, cryosphere and marine life.

Chronobiology of deep-water decapod crustaceans on continental margins.

PubMed

Aguzzi, Jacopo; Company, Joan B

2010-01-01

Species have evolved biological rhythms in behaviour and physiology with a 24-h periodicity in order to increase their fitness, anticipating the onset of unfavourable habitat conditions. In marine organisms inhabiting deep-water continental margins (i.e. the submerged outer edges of continents), day-night activity rhythms are often referred to in three ways: vertical water column migrations (i.e. pelagic), horizontal displacements within benthic boundary layer of the continental margin, along bathymetric gradients (i.e. nektobenthic), and endobenthic movements (i.e. rhythmic emergence from the substrate). Many studies have been conducted on crustacean decapods that migrate vertically in the water column, but much less information is available for other endobenthic and nektobenthic species. Also, the types of displacement and major life habits of most marine species are still largely unknown, especially in deep-water continental margins, where steep clines in habitat factors (i.e. light intensity and its spectral quality, sediment characteristics, and hydrography) take place. This is the result of technical difficulties in performing temporally scheduled sampling and laboratory testing on living specimens. According to this scenario, there are several major issues that still need extensive research in deep-water crustacean decapods. First, the regulation of their behaviour and physiology by a biological clock is almost unknown compared to data for coastal species that are easily accessible to direct observation and sampling. Second, biological rhythms may change at different life stages (i.e. size-related variations) or at different moments of the reproductive cycle (e.g. at egg-bearing) based on different intra- and interspecific interactions. Third, there is still a major lack of knowledge on the links that exist among the observed bathymetric distributions of species and selected autoecological traits that are controlled by their biological clock, such as the diel rhythm of behaviour. Species evolved in a photically variable environment where intra- and inter-specific interactions change along with the community structure over 24 h. Accordingly, the regulation of their biology through a biological clock may be the major evolutionary constraint that is responsible for their reported bathymetric distributions. In this review, our aim is to propose a series of innovative guidelines for a discussion of the modulation of behavioural rhythms of adult decapod crustaceans, focusing on the deep waters of the continental margin areas of the Mediterranean as a paradigm for other marine zones of the world. Copyright © 2010 Elsevier Ltd. All rights reserved.

[Effects of deep plowing time during the fallow period on water storage-consumption characteristics and wheat yield in dry-land soil.

PubMed

Dang, Jian You; Pei, Xue Xia; Zhang, Ding Yi; Wang, Jiao Ai; Zhang, Jing; Wu, Xue Ping

2016-09-01

Through a three-year field trail, effects of deep plowing time during the fallow period on water storage of 0-200 cm soil before sowing, water consumption of growth period, and growth and development of wheat were investigated. Results demonstrated that soil water storage (SWS) of the fallow period was influenced by deep plowing time, precipitation, and rainfall distribution. With postponing the time of deep plowing in the fallow period, SWS was increased firstly, and then decreased. SWS with deep plowing in early or middle of August was 23.9-45.8 mm more than that with deep plowing in mid-July. It would benefit SWS when more precipitation occurred in the fallow period or more rainfall was distributed in August and September. Deep plowing at a proper time could facilitate SWS, N and P absorption of wheat, and the number of stems before winter and the spike number. The yield of wheat with deep plowing in early or middle August was 3.67%-18.2% higher than that with deep plowing in mid-July, and it was positively correlated with water storage of 0-200 cm soil during the fallow period and SWS of each soil layer during the wheat growth period. However, this correlation coefficient would be weakened by adequate rainfall in spring, the critical growing period for wheat. The time of deep plowing mainly affected the water consumption at soil layer of 60-140 cm during wheat growth. Under current farming conditions of south Shanxi, the increased grain yield of wheat could be achieved by combining the measures of high wheat stubble and wheat straw covering for holding soil water and deep plowing between the Beginning of Autumn (August 6th) and the Limit of Heat (August 21st) for promoting soil water penetration characteristics to improve the number of stems before winter and spike.

Hydrologic processes in deep vadose zones in interdrainage arid environments

USGS Publications Warehouse

Walvoord, Michelle Ann; Scanlon, Bridget R.; Hogan, James F.; Phillips, Fred M.; Scanlon, Bridget R.

2004-01-01

A unifying theory for the hydrology of desert vadose zones is particularly timely considering the rising population and water stresses in arid and semiarid regions. Conventional models cannot reconcile the apparent discrepancy between upward flow indicated by hydraulic gradient data and downward flow suggested by environmental tracer data in deep vadose zone profiles. A conceptual model described here explains both hydraulic and tracer data remarkably well by incorporating the hydrologic role of desert plants that encroached former juniper woodland 10 to 15 thousand years ago in the southwestern United States. Vapor transport also plays an important role in redistributing moisture through deep soils, particularly in coarse-grained sediments. Application of the conceptual model to several interdrainage arid settings reproduces measured matric potentials and chloride accumulation by simulating the transition from downward flow to upward flow just below the root zone initiated by climate and vegetation change. Model results indicate a slow hydraulic drying response in deep vadose zones that enables matric potential profiles to be used to distinguish whether precipitation episodically percolated below the root zone or was completely removed via evapotranspiration during the majority of the Holocene. Recharge declined dramatically during the Holocene in interdrainage basin floor settings of arid and semiarid basins. Current flux estimates across the water table in these environmental settings, are on the order of 0.01 to 0.1 mm yr-1 and may be recharge (downward) or discharge (upward) depending on vadose zone characteristics, such as soil texture, geothermal gradient, and water table depth. In summary, diffuse recharge through the basin floor probably contributes only minimally to the total recharge in arid and semiarid basins.

Lateral-delivered organic matter boosts hadal bacterial abundance in the Mariana Trench: A hypothesis

NASA Astrophysics Data System (ADS)

Zhang, C.; Liu, H.; Lu, F.; Zou, L.; Tian, J.

2017-12-01

Hadal trenches are part of the least investigated biosphere on Earth due to the great challenge of sampling. Limited studies on microbiology by far have suggested that the hadalsphere hosts a heterotrophic microbial community that is likely fed by organic matter from surface-sinking biomass or re-suspended and laterally transported sediments. The uniqueness of trench environment and its potential role in global carbon sequestration entitle a detailed study on microbial-driven carbon cycle of the trench system. In this study, we conducted a vertical sampling of the microbial community and measured the environmental factors from the epipelagic zone down to the hadal zone at the Mariana Trench. 16S rRNA gene composition showed high stratification at the first 1000 meters below surface (mbs) but a nearly uniformed microbial community composition was observed at the abyssopelagic and the hadalpelagic water columns. The deep-sea bacteria were generally chemoheterotrophs and the majority of them were similar to those present at the ocean surface, suggesting influence of epipelagic primary production on deep sea bacterial communication at the trench location. Several deep-sea-enriched but surface-depleted bacteria could be characterized by potential degraders of polysaccharides and n-alkanes. Therefore, recalcitrant hydrocarbons or carbohydrates are likely important carbon sources supporting the deep-sea biosphere. In spite of consistent community composition, a remarkable increase in biomass of small-sized microbial aggregates was detected at 8727 mbs. Enhanced CDOM proportions in the trench imply intensified microbial activity in hadal water compared to the above water column, which agree with the notion of possible extra carbon input from lateral transportation of slope material. These observations extend our understanding in carbon cycle driven by metabolically diverse microorganisms at the trench and may shed light on the complexity of hadal biogeochemistry.

Experimental and ecosystem model approach to assessing the sensitivity of High arctic deep permafrost to changes in surface temperature and precipitation

NASA Astrophysics Data System (ADS)

Rasmussen, L. H.; Zhang, W.; Elberling, B.; Cable, S.

2016-12-01

Permafrost affected areas in Greenland are expected to experience large temperature increases within the 21st century. Most previous studies on permafrost consider near-surface soil, where changes will happen first. However, how sensitive the deep permafrost temperature is to near-surface conditions through changes in soil thermal properties, snow depth and soil moisture, is not known. In this study, we measured the sensitivity of thermal conductivity (TC) to gravimetric water content (GWC) in frozen and thawed deep permafrost sediments from deltaic, alluvial and fluvial depositional environments in the Zackenberg valley, NE Greenland. We also calibrated a coupled heat and water transfer model, the "CoupModel", for the two closely situated deltaic sites, one with average snow depth and the other with topographic snow accumulation. With the calibrated model, we simulated deep permafrost thermal dynamics in four scenarios with changes in surface forcing: a. 3 °C warming and 20 % increase in precipitation; b. 3 °C warming and 100 % increase in precipitation; c. 6 °C warming and 20 % increase in precipitation; d. 6 °C warming and 100 % increase in precipitation.Our results indicated that frozen sediments had higher TC than thawed sediments. All sediments showed a positive linear relation between TC and soil moisture when frozen, and a logarithmic one when thawed. Fluvial sediments had high sensitivity, but never reached above 12 % GWC, indicating a field effect of water retention capacity. Alluvial sediments were less sensitive to soil moisture than deltaic and fluvial sediments, indicating the importance of unfrozen water in frozen sediment. The deltaic site with snow accumulation had 1 °C higher annual mean ground temperature than the average snow site. The soil temperature at the depth of 18 m increased with 1.5 °C and 3.5 °C in the scenarios with 3 °C and 6 °C warming, respectively. Precipitation had no significant additional effect to warming. We conclude that below-ground sediment properties affect the sensitivity of TC to GWC, that surface temperature changes can significantly affect the deep permafrost within a short period, and that differences in snow depth affect surface temperatures. Geology, pedology and precipitation should thus be considered if estimating future High arctic deep permafrost sensitivity.

First biological measurements of deep-sea corals from the Red Sea.

PubMed

Roder, C; Berumen, M L; Bouwmeester, J; Papathanassiou, E; Al-Suwailem, A; Voolstra, C R

2013-10-03

It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with 'deep-sea' and 'cold-water' corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key adaptations to prevailing environmental conditions. We investigated four sites and encountered six species of which at least two appear to be undescribed. One species is previously reported from the Red Sea but occurs in deep cold waters outside the Red Sea raising interesting questions about presumed environmental constraints for other deep-sea corals. Our findings suggest that the present understanding of deep-sea coral persistence and resilience needs to be revisited.

Geochemical Signature of Natural Water Recharge in the Jungar Basin and Its Response to Climate.

PubMed

Zhu, Bingqi; Yu, Jingjie; Rioual, Patrick

2016-01-01

This paper analyzed the physico-chemical characteristics of natural waters in a drainage system of the Jungar Basin, northwestern China to identify chemical evolution and recharge mechanisms of natural waters in an arid environment. The waters studied are different in mineralization, but are typically carbonate rivers and alkaline in nature. No Cl-dominated water type occurs, indicating an early stage of water evolution. Regolith and geomorphological parameters controlling ground-surface temperature may play a large role in the geological evolution of the water. Three main morphological and hydrological units are reflected in water physico-chemistry. Climate influences the salinization of natural waters substantially. Direct recharge from seasonal snow and ice-melt water and infiltration of rain to the ground are significant recharge processes for natural waters, but recharge from potential deep groundwater may be less important. The enrichment of ions in lakes has been mainly caused by evaporation rather than through the quality change of the recharged water.

30 CFR 203.34 - To which production may an RSV earned by qualified phase 2 and phase 3 ultra-deep wells on my...

Code of Federal Regulations, 2010 CFR

2010-07-01

..., on a lease that is located entirely or partly in water less than 200 meters deep; or (2) May 18, 2007, on a lease that is located entirely in water more than 200 meters deep. ... Leases Not Subject to Deep Water Royalty Relief § 203.34 To which production may an RSV earned by...

Water withdrawal in deep soil layers: a key strategy to cope with drought in tropical eucalypt plantations

NASA Astrophysics Data System (ADS)

Christina, M.; Laclau, J.; Nouvellon, Y.; Duursma, R. A.; Stape, J. L.; Lambais, G. R.; Le Maire, G.

2013-12-01

Little is known about the role of very deep roots to supply the water requirements of tropical forests. Clonal Eucalyptus plantations managed in short rotation on very deep Ferralsols are simple forest ecosystems (only 1 plant genotype growing on a relatively homogeneous soil) likely to provide an insight into tree water use strategies in tropical forests. Fine roots have been observed down to a depth of 6 m at age 1 year in Brazilian eucalypt plantations. However, the contribution of water stored in very deep soil layers to stand evapotranspiration over tree growth has been poorly quantified. An eco-physiological model, MAESPA, has been used to simulate half-hourly stand water balance over the first three years of growth in a clonal Eucalyptus grandis plantation in southern Brazil (Eucflux project, State of São Paulo). The water balance model in MAESPA is an equilibrium-type model between soil and leaf water potentials for individual trees aboveground, and at the stand scale belowground. The dynamics of the vertical fine root distribution have been taken into account empirically from linear interpolations between successive measurements. The simulations were compared to time series of soil water contents measured every meter down to 10m deep and to daily latent heat fluxes measured by eddy covariance. Simulations of volumetric soil water contents matched satisfactorily with measurements (RMSE = 0.01) over the three-year period. Good agreement was also observed between simulated and measured latent heat fluxes. In the rainy season, more than 75 % of tree transpiration was supplied by water withdrawn in the upper 1 m of soil, but water uptake progressed to deeper soil layers during dry periods, down to a depth of 6 m, 12 m and 15 m the first, second and third year after planting, respectively. During the second growing season, 15% of water was withdrawn below a depth of 6 m, and 5% below 10m. Most of the soil down to 12m deep was dried out the second year after planting and deep drainage was negligible after 2 years. As a consequence, during the third year after planting only 4% of water was taken up below 6m. However, during the dry season, this deep water still supplied 50% of water requirements. Our results show that deep fine roots of E. grandis play a major role in supplying tree water requirements during extended dry periods. Large amounts of water are stored in the whole soil profile after clear cutting and the fast exploration of deep soil layers by roots make it available for tree growth. After canopy closure, precipitation becomes the key limitation for the productivity of these plantations grown in deep sandy soils. Our results suggest that a territorial strategy leading to a fast exploration of very deep soil layers might provide a strong competitive advantage in regions prone to drought.

The Search for Eight Glacial Cycles of Deep-Water Temperatures and Global ice Volume From the Southern Hemisphere

NASA Astrophysics Data System (ADS)

Ferretti, P.; Elderfield, H.; Greaves, M.; McCave, N.

2007-12-01

It has been recently suggested "a substantial portion of the marine 100-ky cycle that has been object of so much attention over the past quarter of a century is, in reality, a deep-water temperature signal and not an ice volume signal" (Shackleton, 2000). There are currently few records available of deep-water temperature variations during the Pleistocene and most of our understanding is inferred from the oxygen isotopic composition (δ18O) of benthic foraminifera from deep-sea sediments. However, variations in benthic δ18O reflect some combination of local to regional changes in water mass properties (largely deep- water temperature) as well as global changes in seawater δ18O (δ18Osw) resulting from the growth and decay of continental ice. Recent studies suggest that benthic foraminiferal Mg/Ca may be useful in reconstructing deep-water temperature changes, but the application of this method to benthic species has been hampered by a number of unresolved issues, such as uncertainties related to the calibration for benthic Mg at the coldest temperatures. Here we present deep-sea Mg/Ca and δ18O records for the past eight glacial cycles in benthic foraminiferal ( Uvigerina spp.) calcite from a marine sediment core recovered in the mid Southern latitudes. Ocean Drilling Program Site 1123 was retrieved from Chatham Rise, east of New Zealand in the Southwest Pacific Ocean (3290 m water depth). This site lies under the Deep Western Boundary Current (DWBC) that flows into the Pacific Ocean, and is responsible for most of the deep water in that ocean; DWBC strength is directly related to processes occurring around Antarctica. Temperatures derived via pore fluid modeling of the last glacial maximum are available from Site 1123 and represent an important tool to constrain deep-water temperatures estimates using Mg/Ca. In selected time slices, we measured B/Ca ratios in Uvigerina in order to gain information on the deep-water carbonate saturation state and have data of Mg/Ca and B/Ca on planktonic species, which also provides evidence on carbonate saturation state. These results permit preliminary discussion of the magnitude of the deep-water temperature changes during glacial/interglacial transitions and the interglacials themselves. In particular, our deep-water temperature estimates confirm that interglacial stages before 430 ka were characterized by less pronounced warmth - at least in the deeper southern Pacific - than those of the past four climatic cycles, a pattern previously observed in the deuterium record from EPICA Dome C. We examine the relative contributions of deep-water temperature and ice volume to the benthic δ18O signal. The phase relationship between the two signals is tentatively assessed for the middle/late Pleistocene, when different patterns of climate variability have been inferred from marine and ice cores records.

30 CFR 203.43 - To which production do I apply the RSV earned from qualified deep wells or qualified phase 1...

Code of Federal Regulations, 2010 CFR

2010-07-01

... in water between 200 and 400 meters deep, you begin drilling an original deep well with a perforated... 200 meters deep; (ii) May 18, 2007, for an RSV earned by a qualified deep well on a lease that is located entirely in water more than 200 meters deep; or (iii) The date that the first qualified well that...

Role of environmental factors and microorganisms in determining the fate of polycyclic aromatic hydrocarbons in the marine environment

PubMed Central

Duran, Robert; Cravo-Laureau, Cristiana

2016-01-01

Polycyclic aromatic hydrocarbons (PAHs) are widespread in marine ecosystems and originate from natural sources and anthropogenic activities. PAHs enter the marine environment in two main ways, corresponding to chronic pollution or acute pollution by oil spills. The global PAH fluxes in marine environments are controlled by the microbial degradation and the biological pump, which plays a role in particle settling and in sequestration through bioaccumulation. Due to their low water solubility and hydrophobic nature, PAHs tightly adhere to sediments leading to accumulation in coastal and deep sediments. Microbial assemblages play an important role in determining the fate of PAHs in water and sediments, supporting the functioning of biogeochemical cycles and the microbial loop. This review summarises the knowledge recently acquired in terms of both chronic and acute PAH pollution. The importance of the microbial ecology in PAH-polluted marine ecosystems is highlighted as well as the importance of gaining further in-depth knowledge of the environmental services provided by microorganisms. PMID:28201512

Deep South Atlantic carbonate chemistry and increased interocean deep water exchange during last deglaciation

NASA Astrophysics Data System (ADS)

Yu, Jimin; Anderson, Robert F.; Jin, Zhangdong; Menviel, Laurie; Zhang, Fei; Ryerson, Fredrick J.; Rohling, Eelco J.

2014-04-01

Carbon release from the deep ocean at glacial terminations is a critical component of past climate change, but the underlying mechanisms remain poorly understood. We present a 28,000-year high-resolution record of carbonate ion concentration, a key parameter of the global carbon cycle, at 5-km water depth in the South Atlantic. We observe similar carbonate ion concentrations between the Last Glacial Maximum and the late Holocene, despite elevated concentrations in the glacial surface ocean. This strongly supports the importance of respiratory carbon accumulation in a stratified deep ocean for atmospheric CO2 reduction during the last ice age. After ˜9 μmol/kg decline during Heinrich Stadial 1, deep South Atlantic carbonate ion concentration rose by ˜24 μmol/kg from the onset of Bølling to Pre-boreal, likely caused by strengthening North Atlantic Deep Water formation (Bølling) or increased ventilation in the Southern Ocean (Younger Drays) or both (Pre-boreal). The ˜15 μmol/kg decline in deep water carbonate ion since ˜10 ka is consistent with extraction of alkalinity from seawater by deep-sea CaCO3 compensation and coral reef growth on continental shelves during the Holocene. Between 16,600 and 15,000 years ago, deep South Atlantic carbonate ion values converged with those at 3.4-km water depth in the western equatorial Pacific, as did carbon isotope and radiocarbon values. These observations suggest a period of enhanced lateral exchange of carbon between the deep South Atlantic and Pacific Oceans, probably due to an increased transfer of momentum from southern westerlies to the Southern Ocean. By spreading carbon-rich deep Pacific waters around Antarctica for upwelling, invigorated interocean deep water exchange would lead to more efficient CO2 degassing from the Southern Ocean, and thus to an atmospheric CO2 rise, during the early deglaciation.

76 FR 79620 - Fisheries of the Exclusive Economic Zone Off Alaska; Gulf of Alaska; Proposed 2012 and 2013...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-12-22

.... Apportionment of trawl PSC limits between the deep-water and shallow-water fisheries, limits for non-exempt... limit from the third season deep-water species fishery allowance for the GOA trawl fisheries to Rockfish... specifications. The draft 2011 SAFE reports indicate that the biomass trend for shallow-water flatfish, deep...

Effects of High Hydrostatic Pressure on Coastal Bacterial Community Abundance and Diversity

PubMed Central

Marietou, Angeliki

2014-01-01

Hydrostatic pressure is an important parameter influencing the distribution of microbial life in the ocean. In this study, the response of marine bacterial populations from surface waters to pressures representative of those under deep-sea conditions was examined. Southern California coastal seawater collected 5 m below the sea surface was incubated in microcosms, using a range of temperatures (16 to 3°C) and hydrostatic pressure conditions (0.1 to 80 MPa). Cell abundance decreased in response to pressure, while diversity increased. The morphology of the community also changed with pressurization to a predominant morphotype of small cocci. The pressure-induced community changes included an increase in the relative abundance of Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, and Flavobacteria largely at the expense of Epsilonproteobacteria. Culturable high-pressure-surviving bacteria were obtained and found to be phylogenetically similar to isolates from cold and/or deep-sea environments. These results provide novel insights into the response of surface water bacteria to changes in hydrostatic pressure. PMID:25063663

Lonely GPFUTV-the movement of water under the action of unknown vacuum

NASA Astrophysics Data System (ADS)

Lin, Weiyi

2013-11-01

In this paper, firstly, the experiment on the flow resistance of the aerated pipe flow is introduced. The experimental research on comparison between different volumes of air entrained is presented. Secondly, the characteristics of gravity pipe flow under the action of Torricelli's vacuum, shortly called as GPFUTV are dissertated, including creative and functional design, fundamental principle, etc. Under the joint action of an unknown vacuum energy and the formation of non-aerated flow the water flow is full-pipe and continuous, high-speed and non-rotational as distinguished from turbulent flow. Thirdly, an appeal in relation to the experimental research, the applied studies and basic theory research is given. For instance, experimental study of Torricelli's experiment phenomenon in the vacuum environment, applied study of the potential for GPFUTV to be developed for deep seawater suction technology and lifting technology for deep ocean mining, theoretical study of flow stability and flow resistance under GPFUTV condition, etc. At last, the famous GPFUTV project is illustrated. 12 years of rigorous and independent survey research.

Broadband calibration of the R/V Marcus G. Langseth four-string seismic sources

NASA Astrophysics Data System (ADS)

Tolstoy, M.; Diebold, J.; Doermann, L.; Nooner, S.; Webb, S. C.; Bohnenstiehl, D. R.; Crone, T. J.; Holmes, R. C.

2009-08-01

The R/V Marcus G. Langseth is the first 3-D seismic vessel operated by the U.S. academic community. With up to a four-string, 36-element source and four 6-km-long solid state hydrophone arrays, this vessel promises significant new insights into Earth science processes. The potential impact of anthropogenic sound sources on marine life is an important topic to the marine seismic community. To ensure that operations fully comply with existing and future marine mammal permitting requirements, a calibration experiment was conducted in the Gulf of Mexico in 2007-2008. Results are presented from deep (˜1.6 km) and shallow (˜50 m) water sites, obtained using the full 36-element (6600 cubic inches) seismic source. This array configuration will require the largest safety radii, and the deep and shallow sites provide two contrasting operational environments. Results show that safety radii and the offset between root-mean-square and sound exposure level measurements were highly dependent on water depth.

Environmental Conditions Outweigh Geographical Contiguity in Determining the Similarity of nifH-Harboring Microbial Communities in Sediments of Two Disconnected Marginal Seas

PubMed Central

Zhou, Haixia; Dang, Hongyue; Klotz, Martin G.

2016-01-01

Ecological evidence suggests that heterotrophic diazotrophs fueled by organic carbon respiration in sediments play an important role in marine nitrogen fixation. However, fundamental knowledge about the identities, abundance, diversity, biogeography, and controlling environmental factors of nitrogen-fixing communities in open ocean sediments is still elusive. Surprisingly, little is known also about nitrogen-fixing communities in sediments of the more research-accessible marginal seas. Here we report on an investigation of the environmental geochemistry and putative diazotrophic microbiota in the sediments of Bohai Sea, an eutrophic marginal sea of the western Pacific Ocean. Diverse and abundant nifH gene sequences were identified and sulfate-reducing bacteria (SRB) were found to be the dominant putative nitrogen-fixing microbes. Community statistical analyses suggested bottom water temperature, bottom water chlorophyll a content (or the covarying turbidity) and sediment porewater Eh (or the covarying pH) as the most significant environmental factors controlling the structure and spatial distribution of the putative diazotrophic communities, while sediment Hg content, sulfide content, and porewater SiO32−-Si content were identified as the key environmental factors correlated positively with the nifH gene abundance in Bohai Sea sediments. Comparative analyses between the Bohai Sea and the northern South China Sea (nSCS) identified a significant composition difference of the putative diazotrophic communities in sediments between the shallow-water (estuarine and nearshore) and deep-water (offshore and deep-sea) environments, and sediment porewater dissolved oxygen content, water depth and in situ temperature as the key environmental factors tentatively controlling the species composition, community structure, and spatial distribution of the marginal sea sediment nifH-harboring microbiota. This confirms the ecophysiological specialization and niche differentiation between the shallow-water and deep-water sediment diazotrophic communities and suggests that the in situ physical and geochemical conditions play a more important role than geographical contiguity in determining the community similarity of the diazotrophic microbiota in marginal sea sediments. PMID:27489551

The origin of modern agglutinated foraminiferal assemblages: evidence from a stratified fjord

NASA Astrophysics Data System (ADS)

Murray, John W.; Alve, Elisabeth; Cundy, Andrew

2003-11-01

Loch Etive, a silled 145 m deep fjord on the Scottish west coast, provides an example of modern benthic foraminiferal assemblages at intermediate depths (i.e., below the intertidal zone and above the CCD) consisting almost exclusively of organic-cemented agglutinated forms. Since such faunas from intermediate depths are rare in modern oceans but relatively common in the fossil record, the present study allows new insights into one kind of ancient environment for which there are few modern analogues. The strong dominance of agglutinated forms (both living and in some dead assemblages of foraminifera to the exclusion of calcareous taxa) is attributed to the unusual oceanographic conditions. These include a combination of restricted deep-water renewals and strong influence of freshwater which drains through large areas (relative to the size of the loch) of vegetated land. The result is calm bottom water conditions with commonly occurring oxygen depletion (although not anoxic), brackish water throughout the water column (salinity 28 in the deeper parts), and organic-rich (mostly terrestrially derived) sediments with geochemical properties, which, to a much larger degree than open marine ones, are controlled by local input. This environment supports low abundance and low diversity live assemblages, mainly restricted to the surface 1 cm of sediment. The dead assemblages show similar faunal characteristics, but the calcareous components are, due to carbonate dissolution, even more reduced. One of the calcareous species in Loch Etive is Elphidium albiumbilicatum. Its occurrence is the first record in British waters and it matches the previously suggested southern limit of its distribution. Analysis of a 90 cm long core representing sediments deposited over the past two centuries shows the presence of a calcareous dominated assemblage, including more marine species, with a higher diversity, in the lower part. This suggests that Loch Etive is in the process of going from a marine, to a more terrestrial dominated environment. The relatively high sedimentation rate (0.5 cm per yr), the apparent lack of smearing through bioturbation, and the presence of faunal changes in response to reduced marine influence over the past centuries, shows that Loch Etive has a good potential for performing high-resolution climatic studies.

Silurian and Devonian in Vietnam—Stratigraphy and facies

NASA Astrophysics Data System (ADS)

Thanh, Tống Duy; Phương, Tạ Hoàng; Janvier, Philippe; Hùng, Nguyễn Hữu; Cúc, Nguyễn Thị Thu; Dương, Nguyễn Thùy

2013-09-01

Silurian and Devonian deposits in Viet Nam are present in several zones and regions, including Quang Ninh, East Bac Bo, and West Bac Bo Zones of the Bac Bo Region, the Dien Bien-Nghe An and Binh Tri Thien Zones of the Viet-Lao Region, and the South Trung Bo, and Western Nam Bo Zones of the South Viet Nam Region (Fig. 1). The main lithological features and faunal composition of the Silurian and Devonian Units in all these zones are briefly described. The Silurian consists of deep-water deposits of the upper parts of the Co To and Tan Mai Formations in the Quang Ninh Zone, the upper parts of the Phu Ngu Formation in the East Bac Bo Zone and the upper parts of the Long Dai and Song Ca Formations in the Viet-Lao Region. Shallow water facies Silurian units containing benthic faunas are more widely distributed, including the upper part of the Sinh Vinh and Bo Hieng Formations in the West Bac Bo Zone, the Kien An Formation in the Quang Ninh Zone, and, in the Viet-Lao Region, the Dai Giang Formation and the upper part of the Tay Trang Formation. No Lower and Middle Devonian deposits indicate deep water facies, but they are characterized by different shallow water facies. Continental to near shore, deltaic facies characterize the Lower Devonian Song Cau Group in the East Bac Bo Zone, the Van Canh Formation in the Quang Ninh Zone, and the A Choc Formation in the Binh Tri Thien Zone. Similar facies also occur in the Givetian Do Son Formation of the Quang Ninh Zone, and the Tan Lap Formation in the East Bac Bo Zone, and consist of coarse terrigenous deposits—cross-bedded conglomerates, sandstone, etc. Most Devonian units are characterized by shallow marine shelf facies. Carbonate and terrigenous-carbonate facies dominate, and terrigenous facies occur in the Lower and Middle Devonian sections in some areas only. The deep-water-like facies is characteriztic for some Upper Devonian formations in the Bac Bo (Bang Ca and Toc Tat Formations) and Viet-Lao Regions (Thien Nhan and Xom Nha Formations). These formations contain cherty shale or siliceous limestone, and fossils consist of conodonts, but there are also brachiopods and other benthos. They were possibly deposited in a deep water environment on the slope of the continental shelf. Most Devonian units distributed in the North and the Central Viet Nam consist of self shallow water sediments, and apparently they were deposited in a passive marginal marine environment. The coarse clastic continental or subcontinental deposits are distributed only in some areas of the East Bac Bo and of the Quang Ninh zones of the Bac Bo Region, and in the south of the Binh Tri Thien Zone. This situation suggests the influence of the Caledonian movement at the end of the Silurian period that called the Guangxi movement in South China.

Genetic and phenotypic variation along an ecological gradient in lake trout Salvelinus namaycush

USGS Publications Warehouse

Baillie, Shauna M.; Muir, Andrew M.; Hansen, Michael J.; Krueger, Charles C.; Bentzen, Paul

2016-01-01

BackgroundAdaptive radiation involving a colonizing phenotype that rapidly evolves into at least one other ecological variant, or ecotype, has been observed in a variety of freshwater fishes in post-glacial environments. However, few studies consider how phenotypic traits vary with regard to neutral genetic partitioning along ecological gradients. Here, we present the first detailed investigation of lake trout Salvelinus namaycushthat considers variation as a cline rather than discriminatory among ecotypes. Genetic and phenotypic traits organized along common ecological gradients of water depth and geographic distance provide important insights into diversification processes in a lake with high levels of human disturbance from over-fishing.ResultsFour putative lake trout ecotypes could not be distinguished using population genetic methods, despite morphological differences. Neutral genetic partitioning in lake trout was stronger along a gradient of water depth, than by locality or ecotype. Contemporary genetic migration patterns were consistent with isolation-by-depth. Historical gene flow patterns indicated colonization from shallow to deep water. Comparison of phenotypic (Pst) and neutral genetic variation (Fst) revealed that morphological traits related to swimming performance (e.g., buoyancy, pelvic fin length) departed more strongly from neutral expectations along a depth gradient than craniofacial feeding traits. Elevated phenotypic variance with increasing water depth in pelvic fin length indicated possible ongoing character release and diversification. Finally, differences in early growth rate and asymptotic fish length across depth strata may be associated with limiting factors attributable to cold deep-water environments.ConclusionWe provide evidence of reductions in gene flow and divergent natural selection associated with water depth in Lake Superior. Such information is relevant for documenting intraspecific biodiversity in the largest freshwater lake in the world for a species that recently lost considerable genetic diversity and is now in recovery. Unknown is whether observed patterns are a result of an early stage of incipient speciation, gene flow-selection equilibrium, or reverse speciation causing formerly divergent ecotypes to collapse into a single gene pool.

Detailed anatomy of a deep-water carbonate breccia lobe (Upper Jurassic, French subalpine basin)

NASA Astrophysics Data System (ADS)

Courjault, Thomas; Grosheny, Danièle; Ferry, Serge; Sausse, Judith

2011-06-01

Detailed correlations across Tithonian carbonate breccia deposits in the Drôme River area (northern part of the so-called "Vocontian Through") suggest the depositional system was that of an elongated deep-water lobe, up to 70 km long and 20 to 30 km wide, for a thickness reaching 200 m. The Drôme lobe, as it is now called, is mainly made of slope to basinal mudstones breccias with minor platform components, interpreted as debris flow and mud flow deposits, associated with slump deposits. It is basically a base-of-slope system, whose elongated depositional area implies it was a "point-sourced" gravity system, thus perhaps connected to a small canyon cut onto the western slope of the basin. But the mostly mudstone material of the breccias also suggests that the walls of this inferred canyon were the main supplier of the lobe, not the carbonate platform proper. The updip part of the lobe has a complex internal geometry as the deposition of breccia bed packages is interrupted by scourings locally 50 m-deep, indicating maybe a canyon mouth environment. The middle part of the lobe is dominated by pure vertical aggradation of breccia beds with minor intervening erosion. In the downdip part of the system a morphological compensation mechanism occurs as breccia beds tend to spread laterally. A huge slump carrying large mudstone olistoliths ends the breccia deposition at the beginning of the Berriasian. This megaslump deposit was mostly emplaced on the right side of the breccia lobe supporting the idea of a depositional relief. Our observations thus show that previous interpretations as a submarine canyon infilling or as shallow-water breccias formed in-situ by cyclic loading under attenuating hurricane waves approaching the platform are not consistent with our observations. The internal geometry of the system studied brings new data about a poorly-studied kind of "turbidite" systems that of deep-water carbonate breccias.

The effect of ocean alkalinity and carbon transfer on deep-sea carbonate ion concentration during the past five glacial cycles

NASA Astrophysics Data System (ADS)

Kerr, Joanna; Rickaby, Rosalind; Yu, Jimin; Elderfield, Henry; Sadekov, Aleksey Yu.

2017-08-01

Glacial-interglacial deep Indo-Pacific carbonate ion concentration ([CO32-]) changes were mainly driven by two mechanisms that operated on different timescales: 1) a long-term increase during glaciation caused by a carbonate deposition reduction on shelves (i.e., the coral reef hypothesis), and 2) transient carbonate compensation responses to deep ocean carbon storage changes. To investigate these mechanisms, we have used benthic foraminiferal B/Ca to reconstruct deep-water [CO32-] in cores from the deep Indian and Equatorial Pacific Oceans during the past five glacial cycles. Based on our reconstructions, we suggest that the shelf-to-basin shift of carbonate deposition raised deep-water [CO32-], on average, by 7.3 ± 0.5 (SE) μmol/kg during glaciations. Oceanic carbon reorganisations during major climatic transitions caused deep-water [CO32-] deviations away from the long-term trend, and carbonate compensation processes subsequently acted to restore the ocean carbonate system to new steady state conditions. Deep-water [CO32-] showed similar patterns to sediment carbonate content (%CaCO3) records on glacial-interglacial timescales, suggesting that past seafloor %CaCO3 variations were dominated by deep-water carbonate preservation changes at our studied sites.

Microbial diversity in The Cedars, an ultrabasic, ultrareducing, and low salinity serpentinizing ecosystem.

PubMed

Suzuki, Shino; Ishii, Shun'ichi; Wu, Angela; Cheung, Andrea; Tenney, Aaron; Wanger, Greg; Kuenen, J Gijs; Nealson, Kenneth H

2013-09-17

The Cedars, in coastal northern California, is an active site of peridotite serpentinization. The spring waters that emerge from this system feature very high pH, low redox potential, and low ionic concentrations, making it an exceptionally challenging environment for life. We report a multiyear, culture-independent geomicrobiological study of three springs at The Cedars that differ with respect to the nature of the groundwater feeding them. Within each spring, both geochemical properties and microbial diversity in all three domains of life remained stable over a 3-y period, with multiple samples each year. Between the three springs, however, the microbial communities showed considerable differences that were strongly correlated with the source of the serpentinizing groundwater. In the spring fed solely by deep groundwater, phylum Chloroflexi, class Clostridia, and candidate division OD1 were the major taxa with one phylotype in Euryarchaeota. Less-abundant phylotypes include several minor members from other candidate divisions and one phylotype that was an outlier of candidate division OP3. In the springs fed by the mixture of deep and shallow groundwater, organisms close to the Hydrogenophaga within Betaproteobacteria dominated and coexisted with the deep groundwater community members. The shallow groundwater community thus appears to be similar to those described in other terrestrial serpentinizing sites, whereas the deep community is distinctly different from any other previously described terrestrial serpentinizing community. These unique communities have the potential to yield important insights into the development and survival of life in these early-earth analog environments.

Microbial diversity in The Cedars, an ultrabasic, ultrareducing, and low salinity serpentinizing ecosystem

PubMed Central

Suzuki, Shino; Ishii, Shun’ichi; Wu, Angela; Cheung, Andrea; Tenney, Aaron; Wanger, Greg; Kuenen, J. Gijs; Nealson, Kenneth H.

2013-01-01

The Cedars, in coastal northern California, is an active site of peridotite serpentinization. The spring waters that emerge from this system feature very high pH, low redox potential, and low ionic concentrations, making it an exceptionally challenging environment for life. We report a multiyear, culture-independent geomicrobiological study of three springs at The Cedars that differ with respect to the nature of the groundwater feeding them. Within each spring, both geochemical properties and microbial diversity in all three domains of life remained stable over a 3-y period, with multiple samples each year. Between the three springs, however, the microbial communities showed considerable differences that were strongly correlated with the source of the serpentinizing groundwater. In the spring fed solely by deep groundwater, phylum Chloroflexi, class Clostridia, and candidate division OD1 were the major taxa with one phylotype in Euryarchaeota. Less-abundant phylotypes include several minor members from other candidate divisions and one phylotype that was an outlier of candidate division OP3. In the springs fed by the mixture of deep and shallow groundwater, organisms close to the Hydrogenophaga within Betaproteobacteria dominated and coexisted with the deep groundwater community members. The shallow groundwater community thus appears to be similar to those described in other terrestrial serpentinizing sites, whereas the deep community is distinctly different from any other previously described terrestrial serpentinizing community. These unique communities have the potential to yield important insights into the development and survival of life in these early-earth analog environments. PMID:24003156

Southern Ocean Bottom Water Characteristics in CMIP5 Models

NASA Astrophysics Data System (ADS)

Heuzé, Céline; Heywood, Karen; Stevens, David; Ridley, Jeff

2013-04-01

The depiction of Southern Ocean deep water properties and formation processes in climate models is an indicator of their capability to simulate future climate, heat and carbon uptake, and sea level rise. Southern Ocean potential temperature and density averaged over 1986-2005 from fifteen CMIP5 climate models are compared with an observed climatology, focusing on bottom water properties. The mean bottom properties are reasonably accurate for half of the models, but the other half may not yet have approached an equilibrium state. Eleven models create dense water on the Antarctic shelf, but it does not spill off and propagate northwards, alternatively mixing rapidly with less dense water. Instead most models create deep water by open ocean deep convection. Models with large deep convection areas are those with a strong seasonal cycle in sea ice. The most accurate bottom properties occur in models hosting deep convection in the Weddell and Ross gyres.

Heat as a groundwater tracer in shallow and deep heterogeneous media: Analytical solution, spreadsheet tool, and field applications

USGS Publications Warehouse

Kurylyk, Barret L.; Irvine, Dylan J.; Carey, Sean K.; Briggs, Martin A.; Werkema, Dale D.; Bonham, Mariah

2017-01-01

Groundwater flow advects heat, and thus, the deviation of subsurface temperatures from an expected conduction‐dominated regime can be analysed to estimate vertical water fluxes. A number of analytical approaches have been proposed for using heat as a groundwater tracer, and these have typically assumed a homogeneous medium. However, heterogeneous thermal properties are ubiquitous in subsurface environments, both at the scale of geologic strata and at finer scales in streambeds. Herein, we apply the analytical solution of Shan and Bodvarsson (2004), developed for estimating vertical water fluxes in layered systems, in 2 new environments distinct from previous vadose zone applications. The utility of the solution for studying groundwater‐surface water exchange is demonstrated using temperature data collected from an upwelling streambed with sediment layers, and a simple sensitivity analysis using these data indicates the solution is relatively robust. Also, a deeper temperature profile recorded in a borehole in South Australia is analysed to estimate deeper water fluxes. The analytical solution is able to match observed thermal gradients, including the change in slope at sediment interfaces. Results indicate that not accounting for layering can yield errors in the magnitude and even direction of the inferred Darcy fluxes. A simple automated spreadsheet tool (Flux‐LM) is presented to allow users to input temperature and layer data and solve the inverse problem to estimate groundwater flux rates from shallow (e.g., <1 m) or deep (e.g., up to 100 m) profiles. The solution is not transient, and thus, it should be cautiously applied where diel signals propagate or in deeper zones where multi‐decadal surface signals have disturbed subsurface thermal regimes.

The contribution of the Precambrian continental lithosphere to global H2 production.

PubMed

Lollar, Barbara Sherwood; Onstott, T C; Lacrampe-Couloume, G; Ballentine, C J

2014-12-18

Microbial ecosystems can be sustained by hydrogen gas (H2)-producing water-rock interactions in the Earth's subsurface and at deep ocean vents. Current estimates of global H2 production from the marine lithosphere by water-rock reactions (hydration) are in the range of 10(11) moles per year. Recent explorations of saline fracture waters in the Precambrian continental subsurface have identified environments as rich in H2 as hydrothermal vents and seafloor-spreading centres and have suggested a link between dissolved H2 and the radiolytic dissociation of water. However, extrapolation of a regional H2 flux based on the deep gold mines of the Witwatersrand basin in South Africa yields a contribution of the Precambrian lithosphere to global H2 production that was thought to be negligible (0.009 × 10(11) moles per year). Here we present a global compilation of published and new H2 concentration data obtained from Precambrian rocks and find that the H2 production potential of the Precambrian continental lithosphere has been underestimated. We suggest that this can be explained by a lack of consideration of additional H2-producing reactions, such as serpentinization, and the absence of appropriate scaling of H2 measurements from these environments to account for the fact that Precambrian crust represents over 70 per cent of global continental crust surface area. If H2 production via both radiolysis and hydration reactions is taken into account, our estimate of H2 production rates from the Precambrian continental lithosphere of 0.36-2.27 × 10(11) moles per year is comparable to estimates from marine systems.

JAMSTEC E-library of Deep-sea Images (J-EDI) Realizes a Virtual Journey to the Earth's Unexplored Deep Ocean

NASA Astrophysics Data System (ADS)

Sasaki, T.; Azuma, S.; Matsuda, S.; Nagayama, A.; Ogido, M.; Saito, H.; Hanafusa, Y.

2016-12-01

The Japan Agency for Marine-Earth Science and Technology (JAMSTEC) archives a large amount of deep-sea research videos and photos obtained by JAMSTEC's research submersibles and vehicles with cameras. The web site "JAMSTEC E-library of Deep-sea Images : J-EDI" (http://www.godac.jamstec.go.jp/jedi/e/) has made videos and photos available to the public via the Internet since 2011. Users can search for target videos and photos by keywords, easy-to-understand icons, and dive information at J-EDI because operating staffs classify videos and photos as to contents, e.g. living organism and geological environment, and add comments to them.Dive survey data including videos and photos are not only valiant academically but also helpful for education and outreach activities. With the aim of the improvement of visibility for broader communities, we added new functions of 3-dimensional display synchronized various dive survey data with videos in this year.New Functions Users can search for dive survey data by 3D maps with plotted dive points using the WebGL virtual map engine "Cesium". By selecting a dive point, users can watch deep-sea videos and photos and associated environmental data, e.g. water temperature, salinity, rock and biological sample photos, obtained by the dive survey. Users can browse a dive track visualized in 3D virtual spaces using the WebGL JavaScript library. By synchronizing this virtual dive track with videos, users can watch deep-sea videos recorded at a point on a dive track. Users can play an animation which a submersible-shaped polygon automatically traces a 3D virtual dive track and displays of dive survey data are synchronized with tracing a dive track. Users can directly refer to additional information of other JAMSTEC data sites such as marine biodiversity database, marine biological sample database, rock sample database, and cruise and dive information database, on each page which a 3D virtual dive track is displayed. A 3D visualization of a dive track makes users experience a virtual dive survey. In addition, by synchronizing a virtual dive track with videos, it is easy to understand living organisms and geological environments of a dive point. Therefore, these functions will visually support understanding of deep-sea environments in lectures and educational activities.

Accumulation of artificial radionuclides in deep sediments of the Mediterranean Sea

NASA Astrophysics Data System (ADS)

Garcia-Orellana, J.; Sanchez-Cabeza, J. A.; Masque, P.; Costa, E.; Bruach, J. M.; Morist, A.; Luna, J. A.

2003-04-01

Concentrations and inventories of artificial radionuclides (90Sr, 137Cs and 239,40Pu) were determined in deep sediment cores (3.000 m) collected in the western and eastern basins of the Mediterranean Sea in the frame of the ADIOS project. Artificial radionuclides enter the Mediterranean Sea mainly though atmospheric deposition after nuclear weapons tests and the Chernobyl accident, but also through the river discharge of effluents of nuclear facilities (e.g. Rhone and Ebro rivers). The aim of this work is to investigate the degree by which pollutants are transferred to the deep environment of the Mediterranean Sea as a basis to elucidate their effects on benthic organisms. The mean inventories of 239+240Pu, 137Cs and 90Sr in the Western basin are 2.77 ± 0.26, 68 ± 12 and < 7 Bq\\cdotm-2 respectively and 3.29 ± 0.60, 115 ± 33 and 249±154 Bq\\cdotm-2 in the Eastern basin. The activity - depth profiles of 210Pb, together with 14C dating, indicate that sediment mixing redistributes the artificial radionuclides within the first 2 cm of the sedimentary column. Artificial radionuclides inventories in the deep-sea sediments were used to calculate the fraction of the total inventory of artificial radionuclides that is accumulated in the deep sea sediments after scavenging from the water column. Indeed, a balance of the radionuclide distributions in the water column allows evaluating the importance of lateral transport of particulate matter from the continental margins on the accumulation of artificial radionuclides in the deep, open Mediterranean Sea. This is achieved in i) comparison with reported data from coastal areas at different locations in the Mediterranean Sea, and ii) balance of the distribution of the natural radionuclide 210Pb in studied areas (vertical profiles of dissolved and particulate activities, fluxes determined by using sediment trap deployed at different depths and inventories in the bottom sediments). The results, taking into account radioactive decay and exchange fluxes through the Gibraltar Strait, permit to estimate the residence times of pollutants in the water column and predict future evolution of their distributions.

STS-50 Payload Specialist Trinh during JSC WETF Bailout Exercises in Bldg 29

NASA Technical Reports Server (NTRS)

1992-01-01

STS-50 Columbia, Orbiter Vehicle (OV) 102, United States Microgravity Laboratory 1 (USML-1) Payload Specialist Eugene H. Trinh, wearing launch and entry suit (LES), listens to instructions prior to participating in launch emergency egress (bailout) exercises in JSC's Weightless Environment Training Facility (WETF) Bldg 29. The WETF's 25-foot deep pool will simulate the ocean as crewmembers familiarize themselves with procedures associated with a bailout and subsequent water landing.

STS-52 Pilot Baker, in LES, dons parachute during JSC WETF bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Pilot Michael A. Baker is assisted with a training version of his Shuttle partial-pressure launch and entry suit (LES). A technician adjusts his parachute harness prior to the emergency egress (bailout) training exercise in JSC's Weightless Environment Training Facility (WETF) Bldg 29 pool. The WETF's 25-ft deep pool will be used in this simulation of a water landing.

STS-52 Mission Specialist Veach, in LES/LEH, during JSC WETF bailout exercise

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Mission Specialist (MS) Charles Lacy Veach, wearing launch and entry suit (LES) and launch and entry helmet (LEH), smiles as he observes emergency egress (bailout) training exercise in JSC's Weightless Environment Training Facility (WETF) Bldg 29 pool. Veach waits his turn to be dropped into the WETF's 25-ft deep pool which will simulate the ocean during of his water landing.

STS-39 MS Hieb prepares for emergency egress exercises in JSC's WETF Bldg 29

NASA Technical Reports Server (NTRS)

1990-01-01

STS-39 Mission Specialist (MS) Richard J. Hieb, wearing launch and entry suit (LES), parachute pack, and communications carrier assembly (CCA), listens to instructions prior to emergency egress bailout exercises in JSC's Weightless Environment Training Facility (WETF) Bldg 29. The WETF's 25 ft deep pool will simulate the ocean. Crewmembers will practice procedures necessary in the event of an emergency onboard the Space Shuttle requiring a water landing.

STS-52 Mission Specialist Veach in life raft during JSC bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Mission Specialist (MS) Charles Lacy Veach, wearing launch and entry suit (LES) and launch and entry helmet (LEH), floats in a single person life raft during emergency egress (bailout) training exercises in JSC's Weightless Environment Training Facility (WETF) Bldg 29 pool. SCUBA-equipped divers look on. The bailout exercises utilize the WETF's 25-foot deep pool as the ocean for this water landing simulation.

Gorilla jackup offers drilling advantages

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tanner, R.

1983-12-01

The Rowan Gorilla I, recently completed for Rowan Cos. Inc. at Vicksburg, Mississippi, is a 32-million-lb jackup drilling rig - the largest ever built. The rig is designed for use in hostile environments, where it can endure for long periods without resupply. The Gorilla's hull is 297 ft. long, 292 ft. wide and 30 ft. deep. It is designed to survive 90 ft. waves and 82-knots winds in up to 328 ft. of ice-free water.

Deep-sea bioluminescence blooms after dense water formation at the ocean surface.

PubMed

Tamburini, Christian; Canals, Miquel; Durrieu de Madron, Xavier; Houpert, Loïc; Lefèvre, Dominique; Martini, Séverine; D'Ortenzio, Fabrizio; Robert, Anne; Testor, Pierre; Aguilar, Juan Antonio; Samarai, Imen Al; Albert, Arnaud; André, Michel; Anghinolfi, Marco; Anton, Gisela; Anvar, Shebli; Ardid, Miguel; Jesus, Ana Carolina Assis; Astraatmadja, Tri L; Aubert, Jean-Jacques; Baret, Bruny; Basa, Stéphane; Bertin, Vincent; Biagi, Simone; Bigi, Armando; Bigongiari, Ciro; Bogazzi, Claudio; Bou-Cabo, Manuel; Bouhou, Boutayeb; Bouwhuis, Mieke C; Brunner, Jurgen; Busto, José; Camarena, Francisco; Capone, Antonio; Cârloganu, Christina; Carminati, Giada; Carr, John; Cecchini, Stefano; Charif, Ziad; Charvis, Philippe; Chiarusi, Tommaso; Circella, Marco; Coniglione, Rosa; Costantini, Heide; Coyle, Paschal; Curtil, Christian; Decowski, Patrick; Dekeyser, Ivan; Deschamps, Anne; Donzaud, Corinne; Dornic, Damien; Dorosti, Hasankiadeh Q; Drouhin, Doriane; Eberl, Thomas; Emanuele, Umberto; Ernenwein, Jean-Pierre; Escoffier, Stéphanie; Fermani, Paolo; Ferri, Marcelino; Flaminio, Vincenzo; Folger, Florian; Fritsch, Ulf; Fuda, Jean-Luc; Galatà, Salvatore; Gay, Pascal; Giacomelli, Giorgio; Giordano, Valentina; Gómez-González, Juan-Pablo; Graf, Kay; Guillard, Goulven; Halladjian, Garadeb; Hallewell, Gregory; van Haren, Hans; Hartman, Joris; Heijboer, Aart J; Hello, Yann; Hernández-Rey, Juan Jose; Herold, Bjoern; Hößl, Jurgen; Hsu, Ching-Cheng; de Jong, Marteen; Kadler, Matthias; Kalekin, Oleg; Kappes, Alexander; Katz, Uli; Kavatsyuk, Oksana; Kooijman, Paul; Kopper, Claudio; Kouchner, Antoine; Kreykenbohm, Ingo; Kulikovskiy, Vladimir; Lahmann, Robert; Lamare, Patrick; Larosa, Giuseppina; Lattuada, Dario; Lim, Gordon; Presti, Domenico Lo; Loehner, Herbert; Loucatos, Sotiris; Mangano, Salvatore; Marcelin, Michel; Margiotta, Annarita; Martinez-Mora, Juan Antonio; Meli, Athina; Montaruli, Teresa; Moscoso, Luciano; Motz, Holger; Neff, Max; Nezri, Emma Nuel; Palioselitis, Dimitris; Păvălaş, Gabriela E; Payet, Kevin; Payre, Patrice; Petrovic, Jelena; Piattelli, Paolo; Picot-Clemente, Nicolas; Popa, Vlad; Pradier, Thierry; Presani, Eleonora; Racca, Chantal; Reed, Corey; Riccobene, Giorgio; Richardt, Carsten; Richter, Roland; Rivière, Colas; Roensch, Kathrin; Rostovtsev, Andrei; Ruiz-Rivas, Joaquin; Rujoiu, Marius; Russo, Valerio G; Salesa, Francisco; Sánchez-Losa, Augustin; Sapienza, Piera; Schöck, Friederike; Schuller, Jean-Pierre; Schussler, Fabian; Shanidze, Rezo; Simeone, Francesco; Spies, Andreas; Spurio, Maurizio; Steijger, Jos J M; Stolarczyk, Thierry; Taiuti, Mauro G F; Toscano, Simona; Vallage, Bertrand; Van Elewyck, Véronique; Vannoni, Giulia; Vecchi, Manuela; Vernin, Pascal; Wijnker, Guus; Wilms, Jorn; de Wolf, Els; Yepes, Harold; Zaborov, Dmitry; De Dios Zornoza, Juan; Zúñiga, Juan

2013-01-01

The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in the properties of deep waters. Such changes are triggered by the winter cooling and evaporation experienced by the upper ocean layer in the Gulf of Lion that leads to the formation and subsequent sinking of dense water through a process known as "open-sea convection". It episodically renews the deep water of the study area and conveys fresh organic matter that fuels the deep ecosystems. Luminous bacteria most likely are the main contributors to the observed deep-sea bioluminescence blooms. Our observations demonstrate a consistent and rapid connection between deep open-sea convection and bathypelagic biological activity, as expressed by bioluminescence. In a setting where dense water formation events are likely to decline under global warming scenarios enhancing ocean stratification, in situ observatories become essential as environmental sentinels for the monitoring and understanding of deep-sea ecosystem shifts.

Human Exploration Missions - Maturing Technologies to Sustain Crews

NASA Technical Reports Server (NTRS)

Mukai, Chiaki; Koch, Bernhard; Reese, Terrence G.

2012-01-01

Human exploration missions beyond low earth orbit will be long duration with abort scenarios of days to months. Providing crews with the essentials of life such as clean air and potable water means recycling human metabolic wastes back to useful products. Individual technologies are under development for such things as CO2 scrubbing, recovery of O2 from CO2, turning waste water into potable water, and so on. But in order to fully evaluate and mature technologies fully they must be tested in a relevant, high-functionality environment; a systems environment where technologies are challenged with real human metabolic wastes. It is for this purpose that an integrated systems ground testing capability at the Johnson Space Center is being readied for testing. The relevant environment will include deep space habitat human accommodations, sealed atmosphere of 8 psi total pressure and 32% oxygen concentration, life support systems (food, air, water), communications, crew accommodations, medical, EVA, tools, etc. Testing periods will approximate those of the expected missions (such as a near Earth asteroid, Earth ]Moon L2 or L1, the moon, and Mars). This type of integrated testing is needed not only for research and technology development but later during the mission design, development, test, and evaluation phases of preparing for the mission.

A global ocean inventory of anthropogenic mercury based on water column measurements.

PubMed

Lamborg, Carl H; Hammerschmidt, Chad R; Bowman, Katlin L; Swarr, Gretchen J; Munson, Kathleen M; Ohnemus, Daniel C; Lam, Phoebe J; Heimbürger, Lars-Eric; Rijkenberg, Micha J A; Saito, Mak A

2014-08-07

Mercury is a toxic, bioaccumulating trace metal whose emissions to the environment have increased significantly as a result of anthropogenic activities such as mining and fossil fuel combustion. Several recent models have estimated that these emissions have increased the oceanic mercury inventory by 36-1,313 million moles since the 1500s. Such predictions have remained largely untested owing to a lack of appropriate historical data and natural archives. Here we report oceanographic measurements of total dissolved mercury and related parameters from several recent expeditions to the Atlantic, Pacific, Southern and Arctic oceans. We find that deep North Atlantic waters and most intermediate waters are anomalously enriched in mercury relative to the deep waters of the South Atlantic, Southern and Pacific oceans, probably as a result of the incorporation of anthropogenic mercury. We estimate the total amount of anthropogenic mercury present in the global ocean to be 290 ± 80 million moles, with almost two-thirds residing in water shallower than a thousand metres. Our findings suggest that anthropogenic perturbations to the global mercury cycle have led to an approximately 150 per cent increase in the amount of mercury in thermocline waters and have tripled the mercury content of surface waters compared to pre-anthropogenic conditions. This information may aid our understanding of the processes and the depths at which inorganic mercury species are converted into toxic methyl mercury and subsequently bioaccumulated in marine food webs.

Deep-convection events foster carbonate ion reduction in deep coral reefs

NASA Astrophysics Data System (ADS)

Perez, Fiz F.; Fontela, Marcos; Garcia-Ibañez, Maribel I.; Lherminier, Pascale; Zunino, Patricia; de la Paz, Mercedes; Padín, Xose A.; Alonso-Pérez, Fernando; Velo, Anton; Guallart, Elisa F.; Mercier, Herle

2017-04-01

Since millennial times, water mass circulation and deep-convection events have been transforming warm upper waters at high latitudes into cold and well-oxygenated deep waters. These processes have filled the deep North Atlantic Ocean with waters moderately saturated in calcium carbonate, thus promoting the growth of stony corals, which are hotspots of biodiversity. During the Anthropocene, the meridional circulation has been conveying cumulative amounts of more acidified waters with lower calcium carbonate saturation levels due to the incorporation of anthropogenic carbon dioxide, with very harsh conditions for deep cold-water corals projected by 2100. We evaluate the diminution of calcium carbonate saturation levels (aragonite form) due to the increase in anthropogenic carbon dioxide during the last two decades (2002-2016). We observe a strong decrease in the aragonite saturation levels concomitant with the reduction in the volume transport of aragonite-saturated waters. We estimate a 30-35% reduction in the transport of ion carbonate excess over the saturation levels with respect to the natural carbon cycle for the period 2002-2016. This reduction is associated with an increase in the downward transport of hydrogen ions. We also observe a heaving of the aragonite saturation horizons during the last 25 years, which is estimated at 6 m year-1 for the deep waters and 12-14 m year-1 for the intermediated waters. The harsh winters of 2015 and 2016 have fostered the fast addition of more acidified water into the lower layers of the North Atlantic through deep-convection events. In the future scenario of 2oC warming, the anthropogenic carbon dioxide in the water column would be double than today and the associated transport of hydrogen ions towards the bottom water would reduce the aragonite saturation levels to 60-80% with respect to preindustrial levels. This reduction in the aragonite saturation levels would suppose a strong diminution of the North Atlantic habitats where stony corals will be able to inhabit.

Outokumpu Deep Drill Hole: Window to the Precambrian bedrock

NASA Astrophysics Data System (ADS)

Heinonen, Suvi; Kietäväinen, Riikka; Ahonen, Lasse; Kukkonen, Ilmo

2017-04-01

Outokumpu Deep Drill Hole is located in eastern Finland, at latitude 62°43'4'' N and longitude 29°3'43'' E. This 2516 m long and fully cored deep hole has been utilized as a geolaboratory open for researchers worldwide since it was drilled in 2004-2005. The 220 mm diameter drill hole is open without a casing (excluding the uppermost 40 m) and thus provides a direct access to in situ conditions to 2.5 km depth. There is a wide range of wire-line logs carried out by the drilling contractor and later by ICDP (International Continental Scientific Drilling Program) in several logging sessions for geothermal, hydrogeological and deep biosphere studies. Lithology, metamorphism, fluid inclusions, density, magnetic properties, seismic velocities and thermal properties of the drill core have been studied by several international groups. The hole has kept open since the end of drilling enabling future studies to be conducted in it. The drill hole is situated in the southwestern part of the Outokumpu historical mining district famous for its Cu-Co-Zn sulfide deposits. These sulfide deposits are hosted by 1.96 Ga old ophiolitic rock types, known as the Outokumpu assemblage, also penetrated by the deep drill hole at 1314-1515 m depth. Laboratory and in situ petrophysical measurements have provided valuable information about physical properties of the typical rocks of the area that can be utilized in the mineral exploration efforts. The drill site of Outokumpu was chosen based on strong reflectivity observed in the high resolution seismic profiles acquired earlier in the area. Outokumpu Deep Drill Hole revealed that these reflections originate from the acoustic impedance variations caused by the ore hosting Outokumpu assemblage. In 2006, surface seismic reflection and vertical seismic profiling (VSP) data were measured in the drill site, and these data show that not only is Outokumpu assemblage rocks reflective but also water bearing fracture at 965 m depth is observed as a strong reflector. This fracture, as well as other fractures penetrated by the drill hole, contains saline water and gases, mainly methane, nitrogen, hydrogen and helium. Salinity of water in the deeper part (>1000 m) of the drill hole has continuously increased since the drilling. Gas-rich water slowly seeps upward and bubble out at the water table. In total, five different water types have been discerned along the drill hole by geochemical and isotopic methods and residence times up to 58 Ma indicated by the accumulation of noble gases. Microbiological studies in the Outokumpu Deep Drill Hole show that not only do different fracture zones act as places for shift in groundwater chemistry but also in the microbial communities. After a decade of research, Outokumpu drill hole site is geologically well known and thus provides a good environment to test new tools developed for exploration, microbiological or hydrogeological purposes, for example. Geological Survey of Finland is open for new research collaboration projects related to the drill site.

Sources of Hydrogen as Food for Deep Microbial Communities

NASA Technical Reports Server (NTRS)

Freund, Friedemann; Fonda, Mark (Technical Monitor)

1998-01-01

To survive in deep subsurface environments autolithotrophic microbial communities require a sustainable food supply. One possible source is H2 which forms when H2O reacts with ferrous iron at rock surfaces or mineral grain boundaries to produce H2 plus ferric iron. The amount of H2 that can be supplied in this way, however, is relatively small and may not last for more than a few hundred or thousand years. A much larger reservoir of H2 exists in the rocks, inside mineral grains, arising from an as yet little-known redox conversion that affects OH- in nominally anhydrous minerals. These OH- represent small amounts of "water" that become incorporated during crystallization in H2O-laden environments. A corollary of the H2 formation from OH- is the formation of peroxy, an oxidized form of oxygen. While the peroxy become part of the mineral structure, the H2 molecules are diffusively mobile and can escape from within the mineral grains, entering the intergranular space. Assuming cautiously realistic number densities of OH- undergoing the in situ redox conversion to H2 plus peroxy, a 10 km deep rock column is expected to contain enough H2 to allow for a constant degassing rate of 50-100 nmole H2 per day per sq cm over 30 million years.

An Experimental and Modeling Synthesis to Determine Seasonality of Hydraulic Redistribution in Semi-arid Region with Multispecies Vegetation Interaction

NASA Astrophysics Data System (ADS)

Lee, E.; Kumar, P.; Barron-Gafford, G.; Scott, R. L.

2016-12-01

A key challenge in critical zone science is to understand and predict the interaction between aboveground and belowground eco-hydrologic processes. Roots play an important role in linking aboveground plant ecophysiological processes, such as carbon, water and energy exchange with the atmosphere, and the belowground processes associated with soil moisture and carbon, and microbial and nutrient dynamics. This study analyzes aboveground and belowground interaction through hydraulic redistribution (HR), a phenomenon that roots serve as preferential pathways for water movement from wet to dry soil layers. HR process is simulated by multi-layer canopy model and compared with relative measurements from the field to study effect of HR on different plant species where Posopis velutina Woot. (velvet mesquite) and understory co-exist and share resources. The study site is one of Ameriflux sites: Santa Rita Mesquite savanna, Arizona, with a distinct dry season that facilitates occurrence of HR. We analyzed how two vegetation species share and utilize the limited amount of water by HR in both dry and wet seasons. During dry season, water moves from deep layer to shallow layer through roots and hydraulic lift (HL) occurs. During wet season, water moves from shallow layer to deep layer through roots and hydraulic descent (HD) occurs. About 40% of precipitation is transferred to deep soil layer with HD and 15% of that is transported back to shallow soil layer with HL in dry season. Assuming water supplied through HL supports evapotranspiration of plants, HL supports 10% of evapotranspiration. The ratio of mesquite and understory root conductivities is an important factor that determines how two plant species interact and share resources in water-limited environment. The sensitivity analysis of root conductivities suggests that high understory root conductivity facilitates water transported by HR and increases mesquite transpiration and photosynthesis. Understory transpiration and photosynthesis show increase with HR only in dry season when water is supplied to shallow layer through HL. With low understory root conductivity, understory looses the competition for water against mesquite and show decrease in transpiration and photosynthetic fluxes when HR is allowed.

Biogeochemical malfunctioning in sediments beneath a deep-water fish farm.

PubMed

Valdemarsen, Thomas; Bannister, Raymond J; Hansen, Pia K; Holmer, Marianne; Ervik, Arne

2012-11-01

We investigated the environmental impact of a deep water fish farm (190 m). Despite deep water and low water currents, sediments underneath the farm were heavily enriched with organic matter, resulting in stimulated biogeochemical cycling. During the first 7 months of the production cycle benthic fluxes were stimulated >29 times for CO(2) and O(2) and >2000 times for NH(4)(+), when compared to the reference site. During the final 11 months, however, benthic fluxes decreased despite increasing sedimentation. Investigations of microbial mineralization revealed that the sediment metabolic capacity was exceeded, which resulted in inhibited microbial mineralization due to negative feed-backs from accumulation of various solutes in pore water. Conclusions are that (1) deep water sediments at 8 °C can metabolize fish farm waste corresponding to 407 and 29 mmol m(-2) d(-1) POC and TN, respectively, and (2) siting fish farms at deep water sites is not a universal solution for reducing benthic impacts. Copyright © 2012 Elsevier Ltd. All rights reserved.

Phylogenetic diversity and ecological pattern of ammonia-oxidizing archaea in the surface sediments of the western Pacific.

PubMed

Cao, Huiluo; Hong, Yiguo; Li, Meng; Gu, Ji-Dong

2011-11-01

The phylogenetic diversity of ammonia-oxidizing archaea (AOA) was surveyed in the surface sediments from the northern part of the South China Sea (SCS). The distribution pattern of AOA in the western Pacific was discussed through comparing the SCS with other areas in the western Pacific including Changjiang Estuary and the adjacent East China Sea where high input of anthropogenic nitrogen was evident, the tropical West Pacific Continental Margins close to the Philippines, the deep-sea methane seep sediments in the Okhotsk Sea, the cold deep sea of Northeastern Japan Sea, and the hydrothermal field in the Southern Okinawa Trough. These various environments provide a wide spectrum of physical and chemical conditions for a better understanding of the distribution pattern and diversities of AOA in the western Pacific. Under these different conditions, the distinct community composition between shallow and deep-sea sediments was clearly delineated based on the UniFrac PCoA and Jackknife Environmental Cluster analyses. Phylogenetic analyses showed that a few ammonia-oxidizing archaeal subclades in the marine water column/sediment clade and endemic lineages were indicative phylotypes for some environments. Higher phylogenetic diversity was observed in the Philippines while lower diversity in the hydrothermal vent habitat. Water depth and possibly with other environmental factors could be the main driving forces to shape the phylogenetic diversity of AOA observed, not only in the SCS but also in the whole western Pacific. The multivariate regression tree analysis also supported this observation consistently. Moreover, the functions of current and other climate factors were also discussed in comparison of phylogenetic diversity. The information collectively provides important insights into the ecophysiological requirements of uncultured ammonia-oxidizing archaeal lineages in the western Pacific Ocean.

Arsenic migration to deep groundwater in Bangladesh influenced by adsorption and water demand

NASA Astrophysics Data System (ADS)

Radloff, K. A.; Zheng, Y.; Michael, H. A.; Stute, M.; Bostick, B. C.; Mihajlov, I.; Bounds, M.; Huq, M. R.; Choudhury, I.; Rahman, M. W.; Schlosser, P.; Ahmed, K. M.; van Geen, A.

2011-11-01

The consumption of shallow groundwater with elevated concentrations of arsenic is causing widespread disease in many parts of South and Southeast Asia. In the Bengal Basin, a growing reliance on groundwater sourced below 150-m depth--where arsenic concentrations tend to be lower--has reduced exposure. Groundwater flow simulations have suggested that these deep waters are at risk of contamination due to replenishment with high-arsenic groundwater from above, even when deep water pumping is restricted to domestic use. However, these simulations have neglected the influence of sediment adsorption on arsenic migration. Here, we inject arsenic-bearing groundwater into a deep aquifer zone in Bangladesh, and monitor the reduction in arsenic levels over time following stepwise withdrawal of the water. Arsenic concentrations in the injected water declined by 70% after 24h in the deep aquifer zone, owing to adsorption on sediments; concentrations of a co-injected inert tracer remain unchanged. We incorporate the experimentally determined adsorption properties of sands in the deep aquifer zone into a groundwater flow and transport model covering the Bengal Basin. Simulations using present and future scenarios of water-use suggest that arsenic adsorption significantly retards transport, thereby extending the area over which deep groundwater can be used with low risk of arsenic contamination. Risks are considerably lower when deep water is pumped for domestic use alone. Some areas remain vulnerable to arsenic intrusion, however, and we suggest that these be prioritized for monitoring.

Deep and intermediate mediterranean water in the western Alboran Sea

NASA Astrophysics Data System (ADS)

Parrilla, Gregorio; Kinder, Thomas H.; Preller, Ruth H.

1986-01-01

Hydrographic and current meter data, obtained during June to October 1982, and numerical model experiments are used to study the distribution and flow of Mediterranean waters in the western Alboran Sea. The Intermediate Water is more pronounced in the northern three-fourths of the sea, but its distribution is patchy as manifested by variability of the temperature and salinity maxima at scales ≤10 km. Current meters in the lower Intermediate Water showed mean flow toward the Strait at 2 cm s -1. A reversal of this flow lasted about 2 weeks. A rough estimate of the mean westward Intermediate Water transport was 0.4 × 10 6 m 3 s -1, about one-third of the total outflow, so that the best estimates of the contributions of traditionally defined Intermediate Water and Deep Water account for only about one-half of the total outflow. The Deep Water was uplifted against the southern continental slope from Alboran Island (3°W) to the Strait. There was also a similar but much weaker banking against the Spanish slope, but a deep current record showed that the eastward recirculation implied by this banking is probably intermittent. Two-layer numerical model experiments simulated the Intermediate Water flow with a flat bottom and the Deep Water with realistic bottom topography. Both experiments replicated the major circulation features, and the Intermediate Water flow was concentrated in the north because of rotation and the Deep Water flow in the south because of topographic control.

77 FR 53776 - Snapper-Grouper Fishery of the South Atlantic; Accountability Measures and Commercial Closures...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-09-04

... respective annual catch limit (ACLs) for the deep-water complex (including yellowedge grouper, blueline... the snapper-grouper resource. DATES: The closure for the deep-water complex as well as the porgy...-grouper fishery of the South Atlantic, which includes yellowtail snapper, gray triggerfish, the deep-water...

Records of continental slope sediment flow morphodynamic responses to gradient and active faulting from integrated AUV and ROV data, offshore Palos Verdes, southern California Borderland

USGS Publications Warehouse

Maier, Katherine L.; Brothers, Daniel; Paull, Charles K.; McGann, Mary; Caress, David W.; Conrad, James E.

2016-01-01

Variations in seabed gradient are widely acknowledged to influence deep-water deposition, but are often difficult to measure in sufficient detail from both modern and ancient examples. On the continental slope offshore Los Angeles, California, autonomous underwater vehicle, remotely operated vehicle, and shipboard methods were used to collect a dense grid of high-resolution multibeam bathymetry, chirp sub-bottom profiles, and targeted sediment core samples that demonstrate the influence of seafloor gradient on sediment accumulation, depositional environment, grain size of deposits, and seafloor morphology. In this setting, restraining and releasing bends along the active right-lateral Palos Verdes Fault create and maintain variations in seafloor gradient. Holocene down-slope flows appear to have been generated by slope failure, primarily on the uppermost slope (~ 100–200 m water depth). Turbidity currents created a low relief (< 10 m) channel, up-slope migrating sediment waves (λ = ~ 100 m, h ≤ 2 m), and a series of depocenters that have accumulated up to 4 m of Holocene sediment. Sediment waves increase in wavelength and decrease in wave height with decreasing gradient. Integrated analysis of high-resolution datasets provides quantification of morphodynamic sensitivity to seafloor gradients acting throughout deep-water depositional systems. These results help to bridge gaps in scale between existing deep-sea and experimental datasets and may provide constraints for future numerical modeling studies.

Estimating the time and temperature relationship for causation of deep-partial thickness skin burns.

PubMed

Abraham, John P; Plourde, Brian; Vallez, Lauren; Stark, John; Diller, Kenneth R

2015-12-01

The objective of this study is to develop and present a simple procedure for evaluating the temperature and exposure-time conditions that lead to causation of a deep-partial thickness burn and the effect that the immediate post-burn thermal environment can have on the process. A computational model has been designed and applied to predict the time required for skin burns to reach a deep-partial thickness level of injury. The model includes multiple tissue layers including the epidermis, dermis, hypodermis, and subcutaneous tissue. Simulated exposure temperatures ranged from 62.8 to 87.8°C (145-190°F). Two scenarios were investigated. The first and worst case scenario was a direct exposure to water (characterized by a large convection coefficient) with the clothing left on the skin following the exposure. A second case consisted of a scald insult followed immediately by the skin being washed with cool water (20°C). For both cases, an Arrhenius injury model was applied whereby the extent and depth of injury were calculated and compared for the different post-burn treatments. In addition, injury values were compared with experiment data from the literature to assess verification of the numerical methodology. It was found that the clinical observations of injury extent agreed with the calculated values. Furthermore, inundation with cool water decreased skin temperatures more quickly than the clothing insulating case and led to a modest decrease in the burn extent. Copyright © 2015 Elsevier Ltd and ISBI. All rights reserved.

Living at the margins - The response of deep-water seagrasses to light and temperature renders them susceptible to acute impacts.

PubMed

Chartrand, Kathryn M; Szabó, Milán; Sinutok, Sutinee; Rasheed, Michael A; Ralph, Peter J

2018-05-01

Seagrasses inhabit environments where light varies at different timescales, nonetheless are acutely sensitive to reductions in light beyond some conditional bounds. Two tropical deep-water seagrasses, Halophila decipiens and Halophila spinulosa, from the Great Barrier Reef were tested for their response to defined light and temperature regimes to identify their growth requirements and potential thresholds of mortality. Species were exposed to two light intensities, saturating (75 μmol photons m -2 s -1 ) and limiting (25 μmol photons m -2 s -1 ) light and two temperature treatments (26 °C and 30 °C) over a four-week period. Wavelength-specific parameters of PSII photochemistry were evaluated for seagrass leaves, as well as shoot density, gas exchange, and pigment content. Both species were sustained under saturating light levels (3.2 mol photons m -2 d -1 ) while limiting light led to decreased shoot density for H. decipiens and H. spinulosa after two and four weeks, respectively. Wavelength-specific photochemistry was also affected under light-limiting treatments for both species while the functional absorption cross section was highly conserved. Photoacclimation and physiological adjustments by either species was not adequate to compensate for reduced irradiance suggesting these plants reside at the margins of their functional limits. As such, relatively short periods of light attenuating events, like dredging or flood plumes, may be detrimental to deep-water seagrass populations. Copyright © 2018 Elsevier Ltd. All rights reserved.

Out of Their Depth? Isolated Deep Populations of the Cosmopolitan Coral Desmophyllum dianthus May Be Highly Vulnerable to Environmental Change

PubMed Central

Miller, Karen J.; Rowden, Ashley A.; Williams, Alan; Häussermann, Vreni

2011-01-01

Deep sea scleractinian corals will be particularly vulnerable to the effects of climate change, facing loss of up to 70% of their habitat as the Aragonite Saturation Horizon (below which corals are unable to form calcium carbonate skeletons) rises. Persistence of deep sea scleractinian corals will therefore rely on the ability of larvae to disperse to, and colonise, suitable shallow-water habitat. We used DNA sequence data of the internal transcribed spacer (ITS), the mitochondrial ribosomal subunit (16S) and mitochondrial control region (MtC) to determine levels of gene flow both within and among populations of the deep sea coral Desmophyllum dianthus in SE Australia, New Zealand and Chile to assess the ability of corals to disperse into different regions and habitats. We found significant genetic subdivision among the three widely separated geographic regions consistent with isolation and limited contemporary gene flow. Furthermore, corals from different depth strata (shallow <600 m, mid 1000–1500 m, deep >1500 m) even on the same or nearby seamounts were strongly differentiated, indicating limited vertical larval dispersal. Genetic differentiation with depth is consistent with the stratification of the Subantarctic Mode Water, Antarctic Intermediate Water, the Circumpolar Deep and North Pacific Deep Waters in the Southern Ocean, and we propose that coral larvae will be retained within, and rarely migrate among, these water masses. The apparent absence of vertical larval dispersal suggests deep populations of D. dianthus are unlikely to colonise shallow water as the aragonite saturation horizon rises and deep waters become uninhabitable. Similarly, assumptions that deep populations will act as refuges for shallow populations that are impacted by activities such as fishing or mining are also unlikely to hold true. Clearly future environmental management strategies must consider both regional and depth-related isolation of deep-sea coral populations. PMID:21611159

The question of recharge to the deep thermal reservoir underlying the geysers and hot springs of Yellowstone National Park: Chapter H in Integrated geoscience studies in Integrated geoscience studies in the Greater Yellowstone Area—Volcanic, tectonic, and hydrothermal processes in the Yellowstone geoecosystem

USGS Publications Warehouse

Rye, Robert O.; Truesdell, Alfred Hemingway; Morgan, Lisa A.

2007-01-01

The extraordinary number, size, and unspoiled beauty of the geysers and hot springs of Yellowstone National Park (the Park) make them a national treasure. The hydrology of these special features and their relation to cold waters of the Yellowstone area are poorly known. In the absence of deep drill holes, such information is available only indirectly from isotope studies. The δD-δ18O values of precipitation and cold surface-water and ground-water samples are close to the global meteoric water line (Craig, 1961). δD values of monthly samples of rain and snow collected from 1978 to 1981 at two stations in the Park show strong seasonal variations, with average values for winter months close to those for cold waters near the collection sites. δD values of more than 300 samples from cold springs, cold streams, and rivers collected during the fall from 1967 to 1992 show consistent north-south and east-west patterns throughout and outside of the Park, although values at a given site vary by as much as 8 ‰ from year to year. These data, along with hot-spring data (Truesdell and others, 1977; Pearson and Truesdell, 1978), show that ascending Yellowstone thermal waters are modified isotopically and chemically by a variety of boiling and mixing processes in shallow reservoirs. Near geyser basins, shallow recharge waters from nearby rhyolite plateaus dilute the ascending deep thermal waters, particularly at basin margins, and mix and boil in reservoirs that commonly are interconnected. Deep recharge appears to derive from a major deep thermal-reservoir fluid that supplies steam and hot water to all geyser basins on the west side of the Park and perhaps in the entire Yellowstone caldera. This water (T ≥350°C; δD = –149±1 ‰) is isotopically lighter than all but the farthest north, highest altitude cold springs and streams and a sinter-producing warm spring (δD = –153 ‰) north of the Park. Derivation of this deep fluid solely from present-day recharge is problematical. The designation of source areas depends on assumptions about the age of the deep water, which in turn depend on assumptions about the nature of the deep thermal system. Modeling, based on published chloride-flux studies of thermal waters, suggests that for a 0.5- to 4-km-deep reservoir the residence time of most of the thermal water could be less than 1,900 years, for a piston-flow model, to more than 10,000 years, for a well-mixed model. For the piston-flow model, the deep system quickly reaches the isotopic composition of the recharge in response to climate change. For this model, stable-isotope data and geologic considerations suggest that the most likely area of recharge for the deep thermal water is in the northwestern part of the Park, in the Gallatin Range, where major north-south faults connect with the caldera. This possible recharge area for the deep thermal water is at least 20 km, and possibly as much as 70 km, from outflow in the thermal areas, indicating the presence of a hydrothermal system as large as those postulated to have operated around large, ancient igneous intrusions. For this model, the volume of isotopically light water infiltrating in the Gallatin Range during our sampling period is too small to balance the present outflow of deep water. This shortfall suggests that some recharge possibly occurred during a cooler time characterized by greater winter precipitation, such as during the Little Ice Age in the 15th century. However, this scenario requires exceptionally fast flow rates of recharge into the deep system. For the well-mixed model, the composition of the deep reservoir changes slowly in response to climate change, and a significant component of the deep thermal water could have recharged during Pleistocene glaciation. The latter interpretation is consistent with the recent discovery of warm waters in wells and springs in southern Idaho that have δD values 10–20 ‰ lower than the winter snow for their present-day high-level recharge. These waters have been interpreted to be Pleistocene in age (Smith and others, 2002). The well-mixed model permits a significant component of recharge water for the deep system to have δD values less negative than –150 ‰ and consequently for the deep system recharge to be closer to the caldera at a number of possible localities in the Park.

Looking for Life in Extreme Environments on Earth and Beyond: Professional Development Workshop for Educators

NASA Astrophysics Data System (ADS)

Droppo, R.; Pratt, L.; Suchecki, P. C.

2010-08-01

The Looking for Life in Extreme Environments workshop held at Indiana University Bloomington in July of 2009 was the first in a series of workshops for high-school teachers that are currently in development. The workshops' modules are based on the research of faculty members in the Departments of Geological Sciences, Biology, and Astronomy, the School of Education, and the School of Public and Environmental Affairs at Indiana University Bloomington; the modules use lessons from Exploring Deep-Subsurface Life. Earth Analogues for Possible Life on Mars: Lessons and Activities, curricular materials that were produced and edited by Lisa Pratt and Ruth Droppo and published by NASA in 2008. Exploring Deep-Subsurface Life is a workbook, a DVD (with closed-captioning), and a CD with the lessons in digital text format for adaptation to classroom needs and printing. Each lesson includes the National Education Standards that apply to the materials. The workbook's lessons are written with three considerations: Life Domains, Cellular Metabolism, and Extreme Environments and Microbes. Students are challenged to build, draw, measure, discuss, and participate in laboratory processes and experiments that help them understand and describe microbes and their environments. In the Capstone, the students write a grant proposal based on the three lessons' analogues. The DVD is collection of videotaped interviews with scientists in laboratories at Michigan State, Princeton, and Indiana University, who are working on water and gas samples they collected from deep gold mines in South Africa and the Canadian Arctic. The interview materials and some animated graphics are compiled into four video pieces that support and compliment the accompanying workbook lessons and activities, and offer students insight into the excitement of scientific discovery.

Estimation of palaeohydrochemical conditions using carbonate minerals

NASA Astrophysics Data System (ADS)

Amamiya, H.; Mizuno, T.; Iwatsuki, T.; Yuguchi, T.; Murakami, H.; Saito-Kokubu, Y.

2014-12-01

The long-term evolution of geochemical environment in deep underground is indispensable research subject for geological disposal of high-level radioactive waste, because the evolution of geochemical environment would impact migration behavior of radionuclides in deep underground. Many researchers have made efforts previously to elucidate the geochemical environment within the groundwater residence time based on the analysis of the actual groundwater. However, it is impossible to estimate the geochemical environment for the longer time scale than the groundwater residence time in this method. In this case, analysis of the chemical properties of secondary minerals are one of useful method to estimate the paleohydrochemical conditions (temperature, salinity, pH and redox potential). In particular, carbonate minerals would be available to infer the long-term evolution of hydrochemical for the following reasons; -it easily reaches chemical equilibrium with groundwater and precipitates in open space of water flowing path -it reflects the chemical and isotopic composition of groundwater at the time of crystallization We reviewed the previous studies on carbonate minerals and geochemical conditions in deep underground and estimated the hydrochemical characteristics of past groundwater by using carbonate minerals. As a result, it was found that temperature and salinity of the groundwater during crystallization of carbonate minerals were evaluated quantitatively. On the other hand, pH and redox potential can only be understood qualitatively. However, it is suggested that the content of heavy metal elements such as manganese, iron and uranium, and rare earth elements in the carbonate minerals are useful indicators for estimating redox potential. This study was carried out under a contract with METI (Ministry of Economy, Trade and Industry) as part of its R&D supporting program for developing geological disposal technology.

Deep-water oilfield development cost analysis and forecasting —— Take gulf of mexico for example

NASA Astrophysics Data System (ADS)

Shi, Mingyu; Wang, Jianjun; Yi, Chenggao; Bai, Jianhui; Wang, Jing

2017-11-01

Gulf of Mexico (GoM) is the earliest offshore oilfield which has ever been developed. It tends to breed increasingly value of efficient, secure and cheap key technology of deep-water development. Thus, the analyze of development expenditure in this area is significantly important the evaluation concept of deep-water oilfield all over the world. This article emphasizes on deep-water development concept and EPC contract value in GoM in recent 10 years in case of comparison and selection to the economic efficiency. Besides, the QUETOR has been put into use in this research processes the largest upstream cost database to simulate and calculate the calculating examples’ expenditure. By analyzing and forecasting the deep-water oilfield development expenditure, this article explores the relevance between expenditure index and oil price.

Review of buried crystalline rocks of eastern United States in selected hydrogeologic environments potentially suitable for isolating high-level radioactive wastes

USGS Publications Warehouse

Davis, R.W.

1984-01-01

Among the concepts suggested for the deep disposal of high-level radioactive wastes from nuclear power reactors is the excavation of a repository in suitable crystalline rocks overlain by a thick sequence of sedimentary strata in a hydrogeologic environment that would effectively impede waste transport. To determine the occurrence of such environments in the Eastern United States, a review was made of available sources of published or unpublished information, using the following hydrogeologic criteria:The top of the crystalline basement rock is 1,000 to 4,000 feet below land surface.The crystalline rock is overlain by sedimentary rock whose lowermost part, at least, contains ground water with a dissolved-solids concentration of 10,000 milligrams per liter or more.Shale or clay confining beds overlie the saline-water aquifer.The flow system in the saline-water aquifer is known or determinable from presently available data.All of these hydrogeologic conditions occur in two general areas: (1) parts of Indiana, Ohio, and Kentucky, underlain by part of the geologic structure known as the Cincinnati arch, and (2) parts of the Atlantic Coastal Plain from Georgia to New Jersey.

30 CFR 203.31 - If I have a qualified phase 2 or qualified phase 3 ultra-deep well, what royalty relief would...

Code of Federal Regulations, 2010 CFR

2010-07-01

... water less than 400 meters deep (see § 203.30(a)), has no existing deep or ultra-deep wells and that the... depths partly or entirely less than 200 meters and has not previously produced from a deep well (§ 203.30... which is 16,000 feet TVD SS and your lease is located in water 100 meters deep. Then in 2008, you drill...

North Atlantic deep water formation and AMOC in CMIP5 models

NASA Astrophysics Data System (ADS)

Heuzé, Céline; Wåhlin, Anna

2017-04-01

North Atlantic deep water formation processes and properties in climate models are indicative of their ability to simulate future ocean circulation, ventilation, carbon and heat uptake, and sea level rise. Historical time series of temperature, salinity, sea ice concentration and ocean transport in the North Atlantic subpolar gyre and Nordic Seas from 23 CMIP5 (Climate Model Intercomparison Project, phase 5) models are compared with observations to reveal the causes and consequences of North Atlantic deep water formation in models. Deep convection occurs at the sea ice edge and is most realistic in models with accurate sea ice extent, mostly those using the CICE model. The trigger of deep convection varies among models; for one third it is intense surface cooling only, while the remaining two thirds also need upward mixing of subsurface warm salty water. The models with the most intense deep convection have the most accurate deep water properties, which are warmer and fresher than in the other models. They also have the strongest Atlantic Meridional Overturning Circulation (AMOC). For over half of the models, 40% of the variability of the AMOC is explained by the volumes of deep water produced in the subpolar gyre and Nordic Seas, with 3 and 4 years lag respectively. Understanding the dynamical drivers of the AMOC in models is key to realistically forecast a possible slow down and its consequences on the global circulation and marine life.

Water temperatures in select nearshore environments of the Colorado River in Grand Canyon, Arizona, during the Low Steady Summer Flow experiment of 2000

USGS Publications Warehouse

Vernieu, William S.; Anderson, Craig R.

2013-01-01

Water releases from Glen Canyon Dam, Arizona, are the primary determinant of streamflow, sediment transport, water quality, and aquatic and riparian habitat availability in the Colorado River downstream of the dam in Grand Canyon. The presence and operation of the dam have transformed the seasonally warm Colorado River into a consistently cold river because of hypolimnetic, or deep-water, releases from the penstock withdrawal structures on the dam. These releases have substantially altered the thermal regime of the downstream riverine environment. This, in turn, has affected the biota of the river corridor, particularly native and nonnative fish communities and the aquatic food web. In the spring and summer of 2000, a Low Steady Summer Flow experiment was conducted by the U.S. Geological Survey and the Bureau of Reclamation to evaluate the effects of the experimental flow on physical and biological resources of the Colorado River ecosystem downstream from Glen Canyon Dam to Lake Mead on the Arizona-Nevada border. This report describes the water temperatures collected during the experimental flow from 14 nearshore sites in the river corridor in Grand Canyon to assess the effects of steady releases on the thermal dynamics of nearshore environments. These nearshore areas are characterized by low-velocity flows with some degree of isolation from the higher velocity flows in the main channel and are hypothesized to be important rearing environments for young native fish. Water-temperature measurements were made at 14 sites, ranging from backwater to open-channel environments. Warming during daylight hours, relative to main-channel temperatures, was measured at all sites in relation to the amount of isolation from the main-channel current. Boat traffic, amount of direct solar radiation, and degree of isolation from the main-channel current appear to be the primary factors affecting the differential warming of the nearshore environment.

Advances in Shallow-Water, High-Resolution Seafloor Mapping: Integrating an Autonomous Surface Vessel (ASV) Into Nearshore Geophysical Studies

NASA Astrophysics Data System (ADS)

Denny, J. F.; O'Brien, T. F.; Bergeron, E.; Twichell, D.; Worley, C. R.; Danforth, W. W.; Andrews, B. A.; Irwin, B.

2006-12-01

The U.S. Geological Survey (USGS) has been heavily involved in geological mapping of the seafloor since the 1970s. Early mapping efforts such as GLORIA provided broad-scale imagery of deep waters (depths > 400 meters) within the Exclusive Economic Zone (EEZ). In the early 1990's, the USGS research emphasis shifted from deep- to shallow-water environments (inner continental shelf, nearshore, estuaries) to address pertinent coastal issues such as erosion, sediment availability, sediment transport, vulnerability of coastal areas to natural and anthropogenic hazards, and resource management. Geologic framework mapping in these shallow- water environments has provided valuable data used to 1) define modern sediment distribution and thickness, 2) determine underlying stratigraphic and structural controls on shoreline behavior, and 3) enable onshore-to- offshore geologic mapping within the coastal zone when coupled with subaerial techniques such as GPR and topographic LIDAR. Research in nearshore areas presents technological challenges due to the dynamics of the environment, high volume of data collected, and the geophysical limitations of operating in very shallow water. In 2004, the USGS, in collaboration with NOAA's Coastal Services Center, began a multi-year seafloor mapping effort to better define oyster habitats within Apalachicola Bay, Florida, a shallow water estuary along the northern Gulf of Mexico. The bay poses a technological challenge due to its shallow depths (< 4-m) and high turbidity that prohibits the use of bathymetric LIDAR. To address this extreme shallow water setting, the USGS incorporated an Autonomous Surface Vessel (ASV) into seafloor mapping operations, in June 2006. The ASV is configured with a chirp sub-bottom profiler (4 24 kHz), dual-frequency chirp sidescan-sonar (100/500 kHz), single-beam echosounder (235 kHz), and forward-looking digital camera, and will be used to delineate the distribution and thickness of surficial sediment, presence of oyster beds, and sea bed morphology in water depths less than 5-m. The ASV is a catamaran-based platform, 10 feet in length, 4 feet in width, and approximately 260 lbs in weight. The vehicle is operated remotely through a wireless modem network enabling real-time monitoring of data acquisition. The ASV is navigated using RTK, and heave, pitch and roll are recorded with onboard motion sensors. Additional sensors, such as ADCPs, can also be housed within the vehicle. The ASV is able to operate in previously inaccessible areas, and will not only augment existing shallow-water research capabilities, but will also improve our understanding of the geologic controls to modern beach behavior and coastal evolution.

Deep-Sea Hydrothermal-Vent Sampler

NASA Technical Reports Server (NTRS)

Behar, Alberto E.; Venkateswaran, Kasthur; Matthews, Jaret B.

2008-01-01

An apparatus is being developed for sampling water for signs of microbial life in an ocean hydrothermal vent at a depth of as much as 6.5 km. Heretofore, evidence of microbial life in deep-sea hydrothermal vents has been elusive and difficult to validate. Because of the extreme conditions in these environments (high pressures and temperatures often in excess of 300 C), deep-sea hydrothermal- vent samplers must be robust. Because of the presumed low density of biomass of these environments, samplers must be capable of collecting water samples of significant volume. It is also essential to prevent contamination of samples by microbes entrained from surrounding waters. Prior to the development of the present apparatus, no sampling device was capable of satisfying these requirements. The apparatus (see figure) includes an intake equipped with a temperature probe, plus several other temperature probes located away from the intake. The readings from the temperature probes are utilized in conjunction with readings from flowmeters to determine the position of the intake relative to the hydrothermal plume and, thereby, to position the intake to sample directly from the plume. Because it is necessary to collect large samples of water in order to obtain sufficient microbial biomass but it is not practical to retain all the water from the samples, four filter arrays are used to concentrate the microbial biomass (which is assumed to consist of particles larger than 0.2 m) into smaller volumes. The apparatus can collect multiple samples per dive and is designed to process a total volume of 10 L of vent fluid, of which most passes through the filters, leaving a total possibly-microbe-containing sample volume of 200 mL remaining in filters. A rigid titanium nose at the intake is used for cooling the sample water before it enters a flexible inlet hose connected to a pump. As the water passes through the titanium nose, it must be cooled to a temperature that is above a mineral-precipitation temperature of 100 C but below the upper working temperature (230 C) of switching valves and tubes in the apparatus. The sample water then passes into a manifold tube, from whence the switching valves can direct the water through either a bypass tube or any one of the filter arrays, without contamination from a previous sample. Each filter array consists of series of filters having pore sizes decreasing in the direction of flow: 90-, 60-, 15-, and 7-micron prefilters and a large-surface-area 0.2-micron collection filter. All the filter taps are located between the intake and the bypass tube so that each time the bypass tube is used, the entire manifold tube is flushed as well.

The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling.

PubMed

Mehrshad, Maliheh; Rodriguez-Valera, Francisco; Amoozegar, Mohammad Ali; López-García, Purificación; Ghai, Rohit

2018-03-01

The dark ocean microbiota represents the unknown majority in the global ocean waters. The SAR202 cluster belonging to the phylum Chloroflexi was the first microbial lineage discovered to specifically inhabit the aphotic realm, where they are abundant and globally distributed. The absence of SAR202 cultured representatives is a significant bottleneck towards understanding their metabolic capacities and role in the marine environment. In this work, we use a combination of metagenome-assembled genomes from deep-sea datasets and publicly available single-cell genomes to construct a genomic perspective of SAR202 phylogeny, metabolism and biogeography. Our results suggest that SAR202 cluster members are medium sized, free-living cells with a heterotrophic lifestyle, broadly divided into two distinct clades. We present the first evidence of vertical stratification of these microbes along the meso- and bathypelagic ocean layers. Remarkably, two distinct species of SAR202 cluster are highly abundant in nearly all deep bathypelagic metagenomic datasets available so far. SAR202 members metabolize multiple organosulfur compounds, many appear to be sulfite-oxidizers and are predicted to play a major role in sulfur turnover in the dark water column. This concomitantly suggests an unsuspected availability of these nutrient sources to allow for the high abundance of these microbes in the deep sea.

First hyperspectral survey of the deep seafloor: DISCOL area, Peru Basin

NASA Astrophysics Data System (ADS)

Dumke, Ines; Nornes, Stein M.; Ludvigsen, Martin

2017-04-01

Conventional hyperspectral seafloor surveys using airborne or satellite platforms are typically limited to shallow coastal areas. This limitation is due to the requirement for illumination by sunlight, which does not penetrate into deeper waters. For hyperspectral studies in deeper marine environments, such as the deep sea, a close-range, sunlight-independent survey approach is therefore required. Here, we present the first hyperspectral data from the deep seafloor. The data were acquired in 4200 m water depth in the DISCOL (disturbance-recolonization) area in the Peru Basin (SW Pacific). This area is characterized by seafloor manganese nodules and recolonization by benthic fauna after a seafloor disturbance experiment conducted in 1989, and was revisited in 2015 by the JPI Oceans cruise SO-242. The acquisition setup consisted of a new Underwater Hyperspectral Imager (UHI) mounted on a remotely operated vehicle (ROV), which provided illumination of the seafloor. High spatial and spectral resolution were achieved by an ROV altitude of 1 m and recording of 112 spectral bands between 380 nm and 800 nm (4 nm resolution). Spectral classification was performed to classify manganese nodules and benthic fauna and map their distribution in the study area. The results demonstrate the high potential of underwater hyperspectral imaging in mapping and classifying seafloor deposits and habitats.

Survivability and growth kinetics of methanogenic archaea at various pHs and pressures: Implications for deep subsurface life on Mars

NASA Astrophysics Data System (ADS)

Sinha, Navita; Nepal, Sudip; Kral, Timothy; Kumar, Pradeep

2017-02-01

Life as we know it requires liquid water and sufficient liquid water is highly unlikely on the surface of present-day Mars. However, according to thermal models there is a possibility of liquid water in the deep subsurface of Mars. Thus, the martian subsurface, where the pressure and temperature is higher, could potentially provide a hospitable environment for a biosphere. Also, methane has been detected in the Mars' atmosphere. Analogous to Earth's atmospheric methane, martian methane could also be biological in origin. The carbon and energy sources for methanogenesis in the subsurface of Mars could be available by downwelling of atmospheric CO2 into the regolith and water-rock reactions such as serpentinization, respectively. Corresponding analogs of the martian subsurface on Earth might be the active sites of serpentinization at depths where methanogenic thermophilic archaea are the dominant species. Methanogens residing in Earth's hydrothermal environments are usually exposed to a variety of physiological stresses including a wide range of pressures, temperatures, and pHs. Martian geochemical models imply that the pH of probable groundwater varies from 4.96 to 9.13. In this work, we used the thermophilic methanogen, Methanothermobacter wolfeii, which grows optimally at 55oC. Therefore, a temperature of 55oC was chosen for these experiments, possibly simulating Mars' subsurface temperature. A martian geophysical model suggests depth and pressure corresponding to a temperature of 55 °C would be between 1-30 km and 100-3,000 atm respectively. Here, we have simulated Mars deep subsurface pH, pressure, and temperature conditions and have investigated the survivability, growth rate, and morphology of M. wolfeii after exposure to a wide range of pH 5-9) and pressure (1-1200 atm) at a temperature of 55 °C. Interestingly, in this study we have found that M. wolfeii was able to survive at all the pressures and pHs tested at 55 °C. In order to understand the effect of different pHs and pressures on the metabolic activities of M. wolfeii, we also calculated their growth rate by measuring methane concentration in the headspace gas samples at regular intervals. In acidic conditions, the growth rate (γ) of M. wolfeii increased with the increase in pressure. In neutral and alkaline conditions, the growth rate (γ) of M. wolfeii initially increased with pressure, but decreased upon further increase of pressure. To investigate the effect of combined pH, pressure, and temperature on the morphology of M. wolfeii, we took phase contrast images of the cells. We did not find any obvious significant alteration in the morphology of M. wolfeii cells. Methanogens, chemolithoautotrophic anaerobic microorganisms, are considered as ideal model microorganisms for Mars. In light of research presented here, we suggest that at least one methanogen, M. wolfeii, could survive in the deep subsurface environment of Mars.

Economic contribution of 'artificial upwelling' mariculture to sea-thermal power generation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roels, O.A.

1976-07-01

Deep-sea water has two valuable properties: it is uniformly cold and, compared to surface water, it is rich in nutrients such as nitrate and phosphate which are necessary for plant growth. In tropical and subtropical areas, the temperature difference between the warm surface water and the cold deep water can be used for sea-thermal power generation or other cooling applications such as air-conditioning, ice-making, desalination, and cooling of refineries, power plants, etc. Once the deep water is brought to the surface, utilization of both the cold temperature and the nutrient content is likely to be more advantageous than the usemore » of only one of them. Claude demonstrated the technical feasibility of sea-thermal power generation in Cuba in 1930. The technical feasibility of artificial upwelling mariculture in the St. Croix installation has been demonstrated. Results to date demonstrate that the gross sales value of the potential mariculture yield from a given volume of deep-sea water is many times that of the sales value of the power which can be generated by the Claude process from the same volume of deep water. Utilizing both the nutrient content and the cold temperature of the deep water may therefore make sea-thermal power generation economically feasible.« less

Insights into Deep-Sea Sediment Fungal Communities from the East Indian Ocean Using Targeted Environmental Sequencing Combined with Traditional Cultivation

PubMed Central

Zhang, Xiao-yong; Tang, Gui-ling; Xu, Xin-ya; Nong, Xu-hua; Qi, Shu-Hua

2014-01-01

The fungal diversity in deep-sea environments has recently gained an increasing amount attention. Our knowledge and understanding of the true fungal diversity and the role it plays in deep-sea environments, however, is still limited. We investigated the fungal community structure in five sediments from a depth of ∼4000 m in the East India Ocean using a combination of targeted environmental sequencing and traditional cultivation. This approach resulted in the recovery of a total of 45 fungal operational taxonomic units (OTUs) and 20 culturable fungal phylotypes. This finding indicates that there is a great amount of fungal diversity in the deep-sea sediments collected in the East Indian Ocean. Three fungal OTUs and one culturable phylotype demonstrated high divergence (89%–97%) from the existing sequences in the GenBank. Moreover, 44.4% fungal OTUs and 30% culturable fungal phylotypes are new reports for deep-sea sediments. These results suggest that the deep-sea sediments from the East India Ocean can serve as habitats for new fungal communities compared with other deep-sea environments. In addition, different fungal community could be detected when using targeted environmental sequencing compared with traditional cultivation in this study, which suggests that a combination of targeted environmental sequencing and traditional cultivation will generate a more diverse fungal community in deep-sea environments than using either targeted environmental sequencing or traditional cultivation alone. This study is the first to report new insights into the fungal communities in deep-sea sediments from the East Indian Ocean, which increases our knowledge and understanding of the fungal diversity in deep-sea environments. PMID:25272044

Particle Mass in Deep-Water Benthic Nepheloid Layers: a Global Synthesis

NASA Astrophysics Data System (ADS)

Mishonov, A. V.; Gardner, W. D.; Richardson, M. J.

2016-12-01

The mass of particles in benthic nepheloid layers in the deep ocean is mapped using profiles of beam attenuation coefficient obtained with transmissometers interfaced with CTDs during WOCE, SAVE, JGOFS, CLIVAR-Repeat Hydrography, and other programs during the last four decades using data from over 8000 profiles from >70 cruises. We map the maximum concentration of particle mass near the seafloor and integrate the particle mass throughout the benthic nepheloid layer. In the Atlantic Ocean particle mass is greater in areas where eddy kinetic energy is high in overlying waters. Areas of high bottom particle concentrations and integrated benthic nepheloid layer particle loads include the western North Atlantic beneath the Gulf Stream meanders and eddies, Argentine Basin, parts of the Southern Ocean and areas around South Africa. Particle concentrations are low in most of the Pacific and tropical and subtropical Atlantic away from margins. This synthesis is useful for GEOTRACES and other global programs where knowing particle distribution is critical for understanding trace metal absorption, sediment-water exchange and near-bottom processes. Additionally, our synthesis provides baseline data to identify where mining of metal-rich nodules and metal sulfides on the seafloor may impact the benthic environment.

Sequence stratigraphy of the Monterey Formation, Santa Barbara County: Integration of physical, chemical, and biofacies data from outcrop and subsurface

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bohacs, K.M.

1991-02-01

Deep basinal rocks of the Monterey Formation can be allocated to different depositional environments based on an integration of bedding, stacking patterns of facies, lithology, biofacies, and inorganic and organic chemistry. These rocks show evidence of systematic changes in depositional environments that can be related to eustatic sea level changes and basin evolution. Even deep-basinal environments are affected by changing sea level through changes in circulation patterns and intensities, nutrient budgets and dispersal patterns, and location and intensity of the oceanic oxygen minimum. The sequence-stratigraphic framework was constructed based on the physical expression of the outcrop strata and confirmed bymore » typing the outcrop sections to an integrated will-log/seismic grid through outcrop gamma-ray spectral profiles. Interpretation of a sequence boundary was based on increased proportions of hemipelagic facies and evidence of increased bottom-energy levels above the boundary, and local erosion and relief on the surface. The proportion of shallower water and reworked dinoflagellates increased to a local maximum above the boundary. Downlap surfaces exhibited increased proportions of pelagic facies around the surface, a secular change in the dominant lithology across the surface, evidence of decreased bottom-energy levels and terrigenous sedimentation rates, and little or not significant erosion on the surface. The proportion of deeper water dinoflagellates increased to a local maximum at or near the downlap surface; there was no evidence of reworked individuals. The detailed sequence-stratigraphic framework makes it possible to tie rock properties to genetic processes for construction of predictive models.« less

The formation of Greenland Sea Deep Water: double diffusion or deep convection?

NASA Astrophysics Data System (ADS)

Clarke, R. Allyn; Swift, James H.; Reid, Joseph L.; Koltermann, K. Peter

1990-09-01

An examination of the extensive hydrographic data sets collected by C.S.S. Hudson and F.S. Meteor in the Norwegian and Greenland Seas during February-June 1982 reveals property distributions and circulation patterns broadly similar to those seen in earlier data sets. These data sets, however, reveal the even stronger role played by topography, with evidence of separate circulation patterns and separate water masses in each of the deep basins. The high precision temperature, salinity and oxygen data obtained reveals significant differences in the deep and bottom waters found in the various basins of the Norwegian and Greenland Seas. A comparison of the 1982 data set with earlier sets shows that the renewal of Greenland Sea Deep Water must have taken place sometime over the last decade; however there is no evidence that deep convective renewal of any of the deep and bottom waters in this region was taking place at the time of the observations. The large-scale density fields, however, do suggest that deep convection to the bottom is most likely to occure in the Greenland Basin due to its deep cyclonic circulation. The hypothesis that Greenland Sea Deep Water (GSDW) is formed through dipycnal mixing processes acting on the warm salty core of Atlantic Water entering the Greenland Sea is examined. θ-S correlations and oxygen concentrations suggest that the salinity maxima in the Greenland Sea are the product of at least two separate mixing processes, not the hypothesized single mixing process leading to GSDW. A simple one-dimensional mixed layer model with ice growth and decay demonstrates that convective renewal of GSDW would have occurred within the Greenland Sea had the winter been a little more severe. The new GSDW produced would have only 0.003 less salt and less than 0.04 ml 1 -1 greater oxygen concentration than that already in the basin. Consequently, detection of whether new deep water has been produced following a winter cooling season could be difficult even with the best of modern accuracy.

Application of Low cost Spirulina growth medium using Deep sea water

NASA Astrophysics Data System (ADS)

Lim, Dae-hack; Kim, Bong-ju; Lee, Sung-jae; Choi, Nag-chul; Park, Cheon-young

2017-04-01

Deep-sea water has a relatively constant temperature, abundant nutrients such as calcium, magnesium, nitrates, and phosphates, etc., and stable water quality, even though there might be some variations of their compositions according to collection places. Thus, deep-sea water would be a good substrate for algal growth and biomass production since it contains various nutrients, including a fluorescent red pigment, and β-carotene, etc. The aim of this study was to investigate the economics of a culture condition through comparative analysis to Spirulina platensis growth characteristic under various medium conditions for cost-effective production of Spirulina sp.. Growth experiments were performed with S. platensis under various culture medium conditions (deep sea water + SP medium). Growth tests for culture medium demonstrated that the deep sea water to SP medium ratio of 50:50(W/W) was effective in S. platensis with the maximum biomass (1.35g/L) and minimum medium making cost per production mass (133.28 KRW/g). Parameter estimation of bio-kinetics (maximum growth rate and yield) for low cost medium results showed that the maximum growth rate and yield of N, P, K were obtained under deep sea water to SP medium ratio of 50:50(W/W) of 0.057 1/day and 0.151, 0.076, 0.123, respectively. Acknowledgment : "This research was a part of the project titled 'Development of microalgae culture technique for cosmetic materials based on ocean deep sea water(20160297)', funded by the Ministry of Oceans and Fisheries, Korea."

Paleo-Productivity across the Paleocene-Eocene Thermal Maximum, Walvis Ridge Transect (ODP Sites 1262, 1263, and 1266)

NASA Astrophysics Data System (ADS)

Chun, C. O.; Delaney, M. L.; Zachos, J. C.

2005-12-01

Walvis Ridge transect (Ocean Drilling Program (ODP) Leg 208) provides the first high-resolution depth-transect of deep-sea sediments recovered from the south Atlantic across the P/E boundary. A geographically restricted depth transect (~ 2.2 km, water depths between 2500 and 4770 m) allows us to constrain the surface waters by assuming marine productivity conditions in the overlying water column are similar across all sites. The sediment record will reveal variations for processes that are water-depth dependent. We use the geochemical tracers; biogenic barium, phosphorus, calcium carbonate, and the redox sensitive trace elements manganese and uranium, to reconstruct nutrient burial, paleoproductivity, and bottom water redox chemistry across the Paleocene-Eocene Thermal Maximum (PETM). We calculate our concentrations on a calcium carbonate-free basis to account for dilution by non-carbonate sediments. Trace metal enrichment factors (EFs) are calculated relative to bulk crustal averages. We chose three sites from the depth transect: the shallowest (Site 1263, 2717 m water depth), an intermediate site (Site 1266, 3798 m water depth), and the deepest site (Site 1262, 4755 m water depth). We sampled each site at a sample resolution of ~ 1-2 kyr for 5 m.y. centered at 55 Ma. Uranium EFs at the shallow site exhibits values ~ 5 pre-event and drop to values near crustal averages during and after the carbon isotope excursion (CIE). No dramatic changes in U EFs across the P/E boundary are recorded at the deep and intermediate sites. Mn EFs range between 2.9 -8.6 prior to the event across all three sites, suggesting an oxygenated depositional environment. At the boundary, Mn EFs drop to crustal averages at all sites, then gradually return to pre-event values, indicating more reducing environments during the CIE, a possible explanation for the benthic extinction event (BEE) observed across this transect. Ba excess and reactive phosphorus exhibit decreased concentrations during the CIE with gradual return to pre-event values at the shallowest and deepest sites. We will compare the paleo-productivity and redox chemistry response at the Walvis Ridge sites across the PETM.

Behavior of TOC in a Deep Confined Aquifer During Groundwater Artificial Recharge Process

NASA Astrophysics Data System (ADS)

Zhang, W.; He, H.; Shi, X.

2013-12-01

In recent years, environmental geological problems such as land subsidence, land collapse, land cracking and salt-water intrusion have become important factors limiting economic development in some cities due to severe overexploitation of groundwater. So, a number of cities have carried out artificial recharge projects, which have played a significant role in controlling these problems. However, with the increasing trend of organic pollution appeared in the surface water, organic contaminated problems should not be neglected during this process. Although the organic components were always following in a lower concentration level, whether it would make groundwater face the organic pollution crisis was unknown for its' higher toxicity and durability. Based on a typical artificial recharge test carried out in a deep confined aquifer in this study area (located in Eastern China, there are 10 monitoring wells and 1 recharge well) that decided to control the field land subsidence, Total Organic Carbon (TOC) was selected as the target components to reveal the organic elements' changing trend during groundwater artificial recharge process. The results (Fig. 1) showed that the concentration of TOC in each monitoring well was appeared in an increasing trend due to the mix influence of the recharge water (TOC was 1.88mg/L) and the origin groundwater (TOC was 0.58mg/L). But the maximum concentrations of TOC in J4, J5, J6 monitoring well (the distance from recharge well was 10m, 17m, 31m respectively) were lower than the recharge water 0.28, 0.49, 0.74 mg/L respectively, with non-linear growth. It indicated that except adsorption, microbial degradation might also occur in the aquifer during artificial recharge. With the groundwater environment from relatively anaerobic environment turn to aerobic environment, DO was able to characterize the relative strength of the TOC biodegradation. The average value of DO in recharge water was 4.33 mg/L, and the maximum value of DO in J4, J5, J6 monitoring well was about 2.54, 2.43, 2.22 mg/L, respectively. All of that showed the farther distance from the recharge well to monitoring wells, the smaller change in the value of DO. It suggested that biodegradation function was in a relative weakening trend away from the recharge position. Based on the complete control of geological, hydrogeological and hydrogeochemical conditions of the test site, GMS (groundwater modelling system) was used to simulate and forecast the TOC changing trend in the deep confined aquifer. The numerical results indicated the radius of influence (over 1.6mg/L) was 170m, 220m and 270m respectively after continuous recharge during 1 year, 2 year and 5 year.

Bioessential element-depleted ocean following the euxinic maximum of the end-Permian mass extinction

NASA Astrophysics Data System (ADS)

Takahashi, Satoshi; Yamasaki, Shin-ichi; Ogawa, Yasumasa; Kimura, Kazuhiko; Kaiho, Kunio; Yoshida, Takeyoshi; Tsuchiya, Noriyoshi

2014-05-01

We describe variations in trace element compositions that occurred on the deep seafloor of palaeo-superocean Panthalassa during the end-Permian mass extinction based on samples of sedimentary rock from one of the most continuous Permian-Triassic boundary sections of the pelagic deep sea exposed in north-eastern Japan. Our measurements revealed low manganese (Mn) enrichment factor (normalised by the composition of the average upper continental crust) and high cerium anomaly values throughout the section, suggesting that a reducing condition already existed in the depositional environment in the Changhsingian (Late Permian). Other redox-sensitive trace-element (vanadium [V], chromium [Cr], molybdenum [Mo], and uranium [U]) enrichment factors provide a detailed redox history ranging from the upper Permian to the end of the Permian. A single V increase (representing the first reduction state of a two-step V reduction process) detected in uppermost Changhsingian chert beds suggests development into a mildly reducing deep-sea condition less than 1 million years before the end-Permian mass extinction. Subsequently, a more reducing condition, inferred from increases in Cr, V, and Mo, developed in overlying Changhsingian grey siliceous claystone beds. The most reducing sulphidic condition is recognised by the highest peaks of Mo and V (second reduction state) in the uppermost siliceous claystone and overlying lowermost black claystone beds, in accordance with the end-Permian mass extinction event. This significant increase in Mo in the upper Changhsingian led to a high Mo/U ratio, much larger than that of modern sulphidic ocean regions. This trend suggests that sulphidic water conditions developed both at the sediment-water interface and in the water column. Above the end-Permian mass extinction horizon, Mo, V and Cr decrease significantly. On this trend, we provide an interpretation of drawdown of these elements in seawater after the massive element precipitation event during the end-Permian maximum development of the reducing water column. A decrease in the Mo/U ratio despite enrichment of Mo and U also supports that of Mo. Calculations of the total amounts of these elements precipitated compared with the global seawater inventory suggest that when more than 6-10% of the global ocean became euxinic as much as the study section, most of the dissolved elements would precipitate into sediments, resulting in a global element-depleted seawater condition. Mo, V, and Cr act as bioessential elements for both primary producers and animals. The continuing reducing water column and the lack of bioessential elements could have had a considerable effect on primary producer turnover and marine life metabolism not only in the pelagic environment, but also in surrounding marine environments.

The importance of habitat and life history to extinction risk in sharks, skates, rays and chimaeras

PubMed Central

García, Verónica B; Lucifora, Luis O; Myers, Ransom A

2007-01-01

We compared life-history traits and extinction risk of chondrichthyans (sharks, rays and chimaeras), a group of high conservation concern, from the three major marine habitats (continental shelves, open ocean and deep sea), controlling for phylogenetic correlation. Deep-water chondrichthyans had a higher age at maturity and longevity, and a lower growth completion rate than shallow-water species. The average fishing mortality needed to drive a deep-water chondrichthyan species to extinction (Fextinct) was 38–58% of that estimated for oceanic and continental shelf species, respectively. Mean values of Fextinct were 0.149, 0.250 and 0.368 for deep-water, oceanic and continental shelf species, respectively. Reproductive mode was an important determinant of extinction risk, while body size had a weak effect on extinction risk. As extinction risk was highly correlated with phylogeny, the loss of species will be accompanied by a loss of phylogenetic diversity. Conservation priority should not be restricted to large species, as is usually suggested, since many small species, like those inhabiting the deep ocean, are also highly vulnerable to extinction. Fishing mortality of deep-water chondrichthyans already exploited should be minimized, and new deep-water fisheries affecting chondrichthyans should be prevented. PMID:17956843

Deep-Sea Bioluminescence Blooms after Dense Water Formation at the Ocean Surface

PubMed Central

Tamburini, Christian; Canals, Miquel; Durrieu de Madron, Xavier; Houpert, Loïc; Lefèvre, Dominique; Martini, Séverine; D'Ortenzio, Fabrizio; Robert, Anne; Testor, Pierre; Aguilar, Juan Antonio; Samarai, Imen Al; Albert, Arnaud; André, Michel; Anghinolfi, Marco; Anton, Gisela; Anvar, Shebli; Ardid, Miguel; Jesus, Ana Carolina Assis; Astraatmadja, Tri L.; Aubert, Jean-Jacques; Baret, Bruny; Basa, Stéphane; Bertin, Vincent; Biagi, Simone; Bigi, Armando; Bigongiari, Ciro; Bogazzi, Claudio; Bou-Cabo, Manuel; Bouhou, Boutayeb; Bouwhuis, Mieke C.; Brunner, Jurgen; Busto, José; Camarena, Francisco; Capone, Antonio; Cârloganu, Christina; Carminati, Giada; Carr, John; Cecchini, Stefano; Charif, Ziad; Charvis, Philippe; Chiarusi, Tommaso; Circella, Marco; Coniglione, Rosa; Costantini, Heide; Coyle, Paschal; Curtil, Christian; Decowski, Patrick; Dekeyser, Ivan; Deschamps, Anne; Donzaud, Corinne; Dornic, Damien; Dorosti, Hasankiadeh Q.; Drouhin, Doriane; Eberl, Thomas; Emanuele, Umberto; Ernenwein, Jean-Pierre; Escoffier, Stéphanie; Fermani, Paolo; Ferri, Marcelino; Flaminio, Vincenzo; Folger, Florian; Fritsch, Ulf; Fuda, Jean-Luc; Galatà, Salvatore; Gay, Pascal; Giacomelli, Giorgio; Giordano, Valentina; Gómez-González, Juan-Pablo; Graf, Kay; Guillard, Goulven; Halladjian, Garadeb; Hallewell, Gregory; van Haren, Hans; Hartman, Joris; Heijboer, Aart J.; Hello, Yann; Hernández-Rey, Juan Jose; Herold, Bjoern; Hößl, Jurgen; Hsu, Ching-Cheng; de Jong, Marteen; Kadler, Matthias; Kalekin, Oleg; Kappes, Alexander; Katz, Uli; Kavatsyuk, Oksana; Kooijman, Paul; Kopper, Claudio; Kouchner, Antoine; Kreykenbohm, Ingo; Kulikovskiy, Vladimir; Lahmann, Robert; Lamare, Patrick; Larosa, Giuseppina; Lattuada, Dario; Lim, Gordon; Presti, Domenico Lo; Loehner, Herbert; Loucatos, Sotiris; Mangano, Salvatore; Marcelin, Michel; Margiotta, Annarita; Martinez-Mora, Juan Antonio; Meli, Athina; Montaruli, Teresa; Motz, Holger; Neff, Max; Nezri, Emma nuel; Palioselitis, Dimitris; Păvălaş, Gabriela E.; Payet, Kevin; Payre, Patrice; Petrovic, Jelena; Piattelli, Paolo; Picot-Clemente, Nicolas; Popa, Vlad; Pradier, Thierry; Presani, Eleonora; Racca, Chantal; Reed, Corey; Riccobene, Giorgio; Richardt, Carsten; Richter, Roland; Rivière, Colas; Roensch, Kathrin; Rostovtsev, Andrei; Ruiz-Rivas, Joaquin; Rujoiu, Marius; Russo, Valerio G.; Salesa, Francisco; Sánchez-Losa, Augustin; Sapienza, Piera; Schöck, Friederike; Schuller, Jean-Pierre; Schussler, Fabian; Shanidze, Rezo; Simeone, Francesco; Spies, Andreas; Spurio, Maurizio; Steijger, Jos J. M.; Stolarczyk, Thierry; Taiuti, Mauro G. F.; Toscano, Simona; Vallage, Bertrand; Van Elewyck, Véronique; Vannoni, Giulia; Vecchi, Manuela; Vernin, Pascal; Wijnker, Guus; Wilms, Jorn; de Wolf, Els; Yepes, Harold; Zaborov, Dmitry; De Dios Zornoza, Juan; Zúñiga, Juan

2013-01-01

The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in the properties of deep waters. Such changes are triggered by the winter cooling and evaporation experienced by the upper ocean layer in the Gulf of Lion that leads to the formation and subsequent sinking of dense water through a process known as “open-sea convection”. It episodically renews the deep water of the study area and conveys fresh organic matter that fuels the deep ecosystems. Luminous bacteria most likely are the main contributors to the observed deep-sea bioluminescence blooms. Our observations demonstrate a consistent and rapid connection between deep open-sea convection and bathypelagic biological activity, as expressed by bioluminescence. In a setting where dense water formation events are likely to decline under global warming scenarios enhancing ocean stratification, in situ observatories become essential as environmental sentinels for the monitoring and understanding of deep-sea ecosystem shifts. PMID:23874425

North Pacific Acoustic Laboratory: Deep Water Acoustic Propagation in the Philippine Sea

DTIC Science & Technology

2016-06-21

the "Special Issue on Deep-water Ocean Acoustics" in the Journal of the Acoustical Society of America (Vol. 134, No . 4, Pt. 2 of 2 , October20 13...also listed. Fourteen (14) of these publications appeared in the " Special Issue on Deep-water Ocean Acoustics" in the Journal of the Acoustical

Break-up of the Atlantic deep western boundary current into eddies at 8 degrees S.

PubMed

Dengler, M; Schott, F A; Eden, C; Brandt, P; Fischer, J; Zantopp, R J

2004-12-23

The existence in the ocean of deep western boundary currents, which connect the high-latitude regions where deep water is formed with upwelling regions as part of the global ocean circulation, was postulated more than 40 years ago. These ocean currents have been found adjacent to the continental slopes of all ocean basins, and have core depths between 1,500 and 4,000 m. In the Atlantic Ocean, the deep western boundary current is estimated to carry (10-40) x 10(6) m3 s(-1) of water, transporting North Atlantic Deep Water--from the overflow regions between Greenland and Scotland and from the Labrador Sea--into the South Atlantic and the Antarctic circumpolar current. Here we present direct velocity and water mass observations obtained in the period 2000 to 2003, as well as results from a numerical ocean circulation model, showing that the Atlantic deep western boundary current breaks up at 8 degrees S. Southward of this latitude, the transport of North Atlantic Deep Water into the South Atlantic Ocean is accomplished by migrating eddies, rather than by a continuous flow. Our model simulation indicates that the deep western boundary current breaks up into eddies at the present intensity of meridional overturning circulation. For weaker overturning, continuation as a stable, laminar boundary flow seems possible.

Integrated Metagenomic and Metatranscriptomic Analyses of Microbial Communities in the Meso- and Bathypelagic Realm of North Pacific Ocean

PubMed Central

Wu, Jieying; Gao, Weimin; Johnson, Roger H.; Zhang, Weiwen; Meldrum, Deirdre R.

2013-01-01

Although emerging evidence indicates that deep-sea water contains an untapped reservoir of high metabolic and genetic diversity, this realm has not been studied well compared with surface sea water. The study provided the first integrated meta-genomic and -transcriptomic analysis of the microbial communities in deep-sea water of North Pacific Ocean. DNA/RNA amplifications and simultaneous metagenomic and metatranscriptomic analyses were employed to discover information concerning deep-sea microbial communities from four different deep-sea sites ranging from the mesopelagic to pelagic ocean. Within the prokaryotic community, bacteria is absolutely dominant (~90%) over archaea in both metagenomic and metatranscriptomic data pools. The emergence of archaeal phyla Crenarchaeota, Euryarchaeota, Thaumarchaeota, bacterial phyla Actinobacteria, Firmicutes, sub-phyla Betaproteobacteria, Deltaproteobacteria, and Gammaproteobacteria, and the decrease of bacterial phyla Bacteroidetes and Alphaproteobacteria are the main composition changes of prokaryotic communities in the deep-sea water, when compared with the reference Global Ocean Sampling Expedition (GOS) surface water. Photosynthetic Cyanobacteria exist in all four metagenomic libraries and two metatranscriptomic libraries. In Eukaryota community, decreased abundance of fungi and algae in deep sea was observed. RNA/DNA ratio was employed as an index to show metabolic activity strength of microbes in deep sea. Functional analysis indicated that deep-sea microbes are leading a defensive lifestyle. PMID:24152557

Deep Water Ocean Acoustics

DTIC Science & Technology

2015-04-15

0 A S S PROGRESS REPORT NO. QSR-14C0172-0CEAN ACOUSTICS-033115 Contract No. N00014-14-C-0172 Office of Naval Research Task Reporting: Deep ...AND SUBTITLE Deep Water Ocean Acoustics 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) 5d. PROJECT NUMBER 5e...298 (Rev. 8-98) Prescribed by ANSI Std Z39-18 Cost Summary OASIS, INC. JOB STATUS RB’ORT 1172 DEEP WATER ACOUSTICS FOP. 9/27f13-316/16

Salinity driven oceanographic upwelling

DOEpatents

Johnson, D.H.

1984-08-30

The salinity driven oceanographic upwelling is maintained in a mariculture device that includes a long main duct in the general shape of a cylinder having perforated cover plates at each end. The mariculture device is suspended vertically in the ocean such that one end of the main duct is in surface water and the other end in relatively deep water that is cold, nutrient rich and relatively fresh in comparison to the surface water which is relatively warm, relatively nutrient deficient and relatively saline. A plurality of elongated flow segregating tubes are disposed in the main duct and extend from the upper cover plate beyond the lower cover plate into a lower manifold plate. The lower manifold plate is spaced from the lower cover plate to define a deep water fluid flow path to the interior space of the main duct. Spacer tubes extend from the upper cover plate and communicate with the interior space of the main duct. The spacer tubes are received in an upper manifold plate spaced from the upper cover plate to define a surface water fluid flow path into the flow segregating tubes. A surface water-deep water counterflow is thus established with deep water flowing upwardly through the main duct interior for discharge beyond the upper manifold plate while surface water flows downwardly through the flow segregating tubes for discharge below the lower manifold plate. During such counterflow heat is transferred from the downflowing warm water to the upflowing cold water. The flow is maintained by the difference in density between the deep water and the surface water due to their differences in salinity. The upwelling of nutrient rich deep water is used for marifarming by fertilizing the nutrient deficient surface water. 1 fig.

Salinity driven oceanographic upwelling

DOEpatents

Johnson, David H.

1986-01-01

The salinity driven oceanographic upwelling is maintained in a mariculture device that includes a long main duct in the general shape of a cylinder having perforated cover plates at each end. The mariculture device is suspended vertically in the ocean such that one end of the main duct is in surface water and the other end in relatively deep water that is cold, nutrient rich and relatively fresh in comparison to the surface water which is relatively warm, relatively nutrient deficient and relatively saline. A plurality of elongated flow segregating tubes are disposed in the main duct and extend from the upper cover plate beyond the lower cover plate into a lower manifold plate. The lower manifold plate is spaced from the lower cover plate to define a deep water fluid flow path to the interior space of the main duct. Spacer tubes extend from the upper cover plate and communicate with the interior space of the main duct. The spacer tubes are received in an upper manifold plate spaced from the upper cover plate to define a surface water fluid flow path into the flow segregating tubes. A surface water-deep water counterflow is thus established with deep water flowing upwardly through the main duct interior for discharge beyond the upper manifold plate while surface water flows downwardly through the flow segregating tubes for discharge below the lower manifold plate. During such counterflow heat is transferred from the downflowing warm water to the upflowing cold water. The flow is maintained by the difference in density between the deep water and the surface water due to their differences in salinity. The upwelling of nutrient rich deep water is used for marifarming by fertilizing the nutrient deficient surface water.

Scanning the Horizon: Coast Guard Strategy in a Hot, Flat, Crowded World

DTIC Science & Technology

2010-03-12

Mexico. From 1992 to 2007, deepwater offshore rigs drilling in deep water in the Gulf of Mexico increased from three to 30, and deepwater oil production...discusses the Coast Guard’s Integrated Deepwater System program, which includes recapitalization of its deep-water vessels and aircraft.89 At the...water and ultra deep water drilling. Discussion of increased outer continental shelf activity in higher level strategic planning indicates that

STS-52 Payload Specialist MacLean floats in pool during JSC bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Payload Specialist Steven G. MacLean, wearing launch and entry suit (LES) and clamshell helmet, is assisted by SCUBA-equipped divers as he floats in pool during emergency egress (bailout) training exercises in JSC's Weightless Environment Training Facility Bldg 29. Bailout exercises utilize the WETF's 25-foot deep pool as the ocean during this water landing simulation. MacLean represents the Canadian Space Agency (CSA).

STS-55 MS3 Harris listens to technician during JSC WETF egress exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-55 Columbia, Orbiter Vehicle (OV) 102, Mission Specialist 3 (MS3) Bernard A. Harris, Jr, wearing launch and entry suit (LES), launch and entry helmet (LEH), and parachute, listens to technician Karen Porter's instructions prior to launch emergency egress (bailout) exercises. The session, held in JSC's Weightless Environment Training Facility (WETF) Bldg 29, used the facility's 25-foot deep pool to simulate the ocean as Harris and other crewmembers practiced water bailout procedures.

Deep-sea ostracods from the South Atlantic sector of the Southern ocean during the Last 370,000 years

USGS Publications Warehouse

Yasuhara, Moriaki; Cronin, T. M.; Hunt, G.; Hodell, D.A.

2009-01-01

We report changes of deep-sea ostracod fauna during the last 370,000 yr from the Ocean Drilling Program (ODP) Hole 704A in the South Atlantic sector of the Southern Ocean. The results show that faunal changes are coincident with glacial/interglacial-scale deep-water circulation changes, even though our dataset is relatively small and the waters are barren of ostracods until mid-MIS (Marine Isotope Stage) 5. Krithe and Poseidonamicus were dominant during the Holocene interglacial period and the latter part of MIS 5, when this site was under the influence of North Atlantic Deep Water (NADW). Conversely, Henryhowella and Legitimocythere were dominant during glacial periods, when this site was in the path of Circumpolar Deep Water (CPDW). Three new species (Aversovalva brandaoae, Poseidonamicus hisayoae, and Krithe mazziniae) are described herein. This is the first report of Quaternary glacial/interglacial scale deep-sea ostracod faunal changes in the Southern and South Atlantic Oceans, a key region for understanding Quaternary climate and deep-water circulation, although the paucity of Quaternary ostracods in this region necessitates further research. ?? 2009 The Paleontological Society.

Diversity and characterization of bacteria associated with the deep-sea hydrothermal vent crab Austinograea sp. comparing with those of two shallow-water crabs by 16S ribosomal DNA analysis

PubMed Central

Wang, Minxiao; Liu, Yuan; Hui, Min

2017-01-01

For deep-sea hydrothermal vent crabs, recent investigations have revealed some epibiotic bacteria, but no study has described the bacterial community associated with the gill and intestine. In this study, the microbiota attached to the gill and intestine of the hydrothermal vent crab Austinograea sp. and two shallow-water crab species (Eriocheir sinensis and Portunus trituberculatus) were compared by high-throughput sequencing of 16S rDNA genes. The highest and lowest diversity in bacterial communities were observed in the gill and intestine of Austinograea sp., respectively. Non-metric multidimensional scaling (NMDS) analysis indicated that Austinograea sp. harbored a distinct microbial community. Operational taxonomic units (OTUs) for phylum Fusobacteria, class Epsilonproteobacteria, and genera Leucothrix, Polaribacter, Fusibacter, etc. were dominant in Austinograea sp. Of these, Leucothrix, Sulfurospirillum, and Arcobacter may be involved in oxidizing reduced sulfur compounds and sulfur metabolism; Marinomonas, Polaribacter adapted to the low temperature, and Fusibacter and Psychrilyobacter may survive well under hypoxic conditions. Bacteria commonly present in seawater were dominant in the gill, whereas anaerobic bacteria showed strikingly high abundance in the intestine. Interestingly, Firmicutes and Epsilonproteobacteria may complement each other in Austinograea sp., forming an internal environment. The diversified microbial community of Austinograea sp. reveals adaptation to the hydrothermal vent environment. PMID:29121118

Effects of the 2014 major Baltic inflow on methane and nitrous oxide dynamics in the water column of the central Baltic Sea

NASA Astrophysics Data System (ADS)

Myllykangas, Jukka-Pekka; Jilbert, Tom; Jakobs, Gunnar; Rehder, Gregor; Werner, Jan; Hietanen, Susanna

2017-09-01

In late 2014, a large, oxygen-rich salt water inflow entered the Baltic Sea and caused considerable changes in deep water oxygen concentrations. We studied the effects of the inflow on the concentration patterns of two greenhouse gases, methane and nitrous oxide, during the following year (2015) in the water column of the Gotland Basin. In the eastern basin, methane which had previously accumulated in the deep waters was largely removed during the year. Here, volume-weighted mean concentration below 70 m decreased from 108 nM in March to 16.3 nM over a period of 141 days (0.65 nM d-1), predominantly due to oxidation (up to 79 %) following turbulent mixing with the oxygen-rich inflow. In contrast nitrous oxide, which was previously absent from deep waters, accumulated in deep waters due to enhanced nitrification following the inflow. Volume-weighted mean concentration of nitrous oxide below 70 m increased from 11.8 nM in March to 24.4 nM in 141 days (0.09 nM d-1). A transient extreme accumulation of nitrous oxide (877 nM) was observed in the deep waters of the Eastern Gotland Basin towards the end of 2015, when deep waters turned anoxic again, sedimentary denitrification was induced and methane was reintroduced to the bottom waters. The Western Gotland Basin gas biogeochemistry was not affected by the inflow.

Aerobic methane production in surface waters of the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Finke, N.; Crespo-Medina, M.; Schweers, J.; Joye, S. B.

2011-12-01

Near surface water of the global oceans often show elevated methane concentrations compared to the water column below with concentrations in supersaturation in regard to the atmosphere (Lamontagne et al. 1973), resulting in a source of this potent greenhouse gas to the atmosphere. The mechanisms leading to methane supersaturation in surface waters remains unclear. Incubations with Trichodesmium-containing Pacific surface water suggested methylphosphonate as potential methane precursor under phosphate limiting conditions (Karl et al. 2008), whereas in phosphate rich Arctic surface waters, DMSP addition stimulated methane production (Damm et al. 2010). Surface waters of the Gulf of Mexico typically exhibit a methane maximum that is conincident with the deep chlorophyll maximum, below the depths where Trichodesmium is abundant. Addition of methylphosphonate, dimethylsulfoniopropionate (DMSP) or methane thiol (MeSH), the proposed methane precursor in DMSP conversion to methane, to oxic sea water did not affect methane production within the chlorophyll maximum at most stations, whereas methyl phosphonate addition stimulated methane production in the surface water and proposed deep Trichodesmium horizon. Pre-filtration of the water through a 10 μm sieve, which eliminated Trichodesmium, or through a 1.2 μm filter, which eliminated additional cyanobacteria such as Synechococcus, did not reduce methane production. Under dark oxic and dark anoxic conditions, however, methane production was reduced 5 and 7-20 fold, respectively, indicating that anerobic methane production in anoxic microniches is not responsible for the methane production. The reduction of methane production under dark conditions suggests that methane production is, in some yet unrecognized way, linked to phototrophic metabolism. Cyanobacteria are likely not responsible for the observed aerobic methane production in the surface waters of the Gulf of Mexico and while methylphosphonate is a potential precursor in the surface waters, the precursor and methanism of methane production within the coincident deep chlorophyll/methane maximum remains unknown. Lamontagne R, Swinnert J, Linnenbo V, Smith WD (1973) Methane concentrations in various marine environments. Journal of Geophysical Research 78, 5317-5324 Karl DM et al. (2008) Aerobic production of methane in the sea. Nature Geosciences 1, 473-478 Damm E et al. (2010) Methane production in aerobic oligotrophic surface water in the central Arctic Ocean. Biogeosciences 7, 1099-1108

The Campanian-Maastrichtian foraminiferal biostratigraphy of the basement sediments from the southern Pannonian Basin (Vojvodina, northern Serbia): implications for the continuation of the Eastern Vardar and Sava zones

NASA Astrophysics Data System (ADS)

Dunčić, Milena; Dulić, Ivan; Popov, Olivera; Bogićević, Goran; Vranjković, Alan

2017-04-01

Micropalaeontological and biostratigraphical studies included Campanian-Maastrichtian complexes from five oil exploration wells drilled in northern Serbia (Vojvodina): the first is a carbonate-clastic complex and second is a complex containing ophiolites intercalated with hemipelagic and pelagic sediments. Within the studied complexes, rich associations of planktonic and benthic foraminifera, calcareous nannoplankton, palynomorphs, as well as shallow and deep-water fossil detritus were determined. The presence of relatively rich associations of planktonic foraminifera allowed recognition of two biozones: the Globotruncana ventricosa Zone, observed in the sediments of the carbonate-clastic complex and the Gansserina gansseri Zone, observed in both complexes. Except biozones, based on documented index species, for some units in both complexes, larger benthic foraminifera species had special biostratigraphical value, and in some of them, the calcareous nannoplankton zones were recognized. The studied complexes represent deep-water formations, generated in oceanic island arc and trough zones. The presence of limestones, which originate from destroyed rudist reefs, is explained by transfer by means of gravitational transport mechanisms of shallow-water sediments to deep-water depositional environments. In this paper, the results of more detailed biostratigraphical and palaeo-ecological studies of foraminifera associations in Campanian-Maastrichtian complexes in Vojvodina are presented. Combined with lithological studies, seven units were determined within the complexes. The obtained results are important as a part of multidisciplinary, regional exploration of both complexes, generated in specific geological conditions, that today constitute a part of the pre-Neogene basement complex in the southeastern part of the Pannonian Basin. The Campanian- Maastrichtian carbonate-clastic complex represents sedimentary cover of the Eastern Vardar Ophiolitic Unit, while the ophiolites intercalated with hemipelagic and pelagic limestones belongs to the Sava Zone.

Relationship Between Metabolic Rate and Sea Depth in Bivalves and Gastropods

NASA Astrophysics Data System (ADS)

Ruiz, B. R.; Shih, B.; Heim, N.; Payne, J.

2016-12-01

The purpose of this study was to find and observe trends in the metabolic rate of bivalves and gastropod in regards to sea depth in order to see if all organisms follow a general trend for metabolism and to provide data to help future conservation efforts of these keystone organisms. Using geographic data produced by McClain et. al (2012) and body size data from Heim et. al (2015), the metabolic rate and sea depth data were plotted using the `R statistical software'. The Pearson correlation test was performed on each respective graph. Deep sea mollusks were considered those that resided at a water depth of 500 meters or deeper while shallow mollusks resided at a depth less than 500 meters. The gastropods showed positive correlations in the relationship between metabolic rate and ocean depth while bivalves showed a negative trend. When the metabolic rate versus minimum ocean depth was graphed, the graphs for deep bivalves and shallow gastropods returned bad p-values. From this data, it can be seen that water depth and metabolic rate have relationships, although different molluscan classes are adapted to their environments in different ways, as seen by the differences in the relationships between metabolic rates and ocean depth of the gastropods and bivalves. The results indicated that there is a general negative trend between metabolic rate and ocean depth of bivalves, and a positive relationship for gastropods. The difference in relationship in gastropods is thought to be attributed to the size trends of gastropods as they live in deeper waters, which is that gastropods increase in size across the bathyal region, and decrease as gastropods approach the extremely deep water. As displayed by the two different metabolic trends, this study shows the different ways molluscan classes have adapted to different evolutionary selection pressures.

Microbiological and Geochemical Survey of CO2-Dominated Mofette and Mineral Waters of the Cheb Basin, Czech Republic.

PubMed

Krauze, Patryk; Kämpf, Horst; Horn, Fabian; Liu, Qi; Voropaev, Andrey; Wagner, Dirk; Alawi, Mashal

2017-01-01

The Cheb Basin (NW Bohemia, Czech Republic) is a shallow, neogene intracontinental basin. It is a non-volcanic region which features frequent earthquake swarms and large-scale diffuse degassing of mantle-derived CO 2 at the surface that occurs in the form of CO 2 -rich mineral springs and wet and dry mofettes. So far, the influence of CO 2 degassing onto the microbial communities has been studied for soil environments, but not for aquatic systems. We hypothesized, that deep-trenching CO 2 conduits interconnect the subsurface with the surface. This admixture of deep thermal fluids should be reflected in geochemical parameters and in the microbial community compositions. In the present study four mineral water springs and two wet mofettes were investigated through an interdisciplinary survey. The waters were acidic and differed in terms of organic carbon and anion/cation concentrations. Element geochemical and isotope analyses of fluid components were used to verify the origin of the fluids. Prokaryotic communities were characterized through quantitative PCR and Illumina 16S rRNA gene sequencing. Putative chemolithotrophic, anaerobic and microaerophilic organisms connected to sulfur (e.g., Sulfuricurvum, Sulfurimonas ) and iron (e.g., Gallionella, Sideroxydans ) cycling shaped the core community. Additionally, CO 2 -influenced waters form an ecosystem containing many taxa that are usually found in marine or terrestrial subsurface ecosystems. Multivariate statistics highlighted the influence of environmental parameters such as pH, Fe 2+ concentration and conductivity on species distribution. The hydrochemical and microbiological survey introduces a new perspective on mofettes. Our results support that mofettes are either analogs or rather windows into the deep biosphere and furthermore enable access to deeply buried paleo-sediments.

Microbiological and Geochemical Survey of CO2-Dominated Mofette and Mineral Waters of the Cheb Basin, Czech Republic

PubMed Central

Krauze, Patryk; Kämpf, Horst; Horn, Fabian; Liu, Qi; Voropaev, Andrey; Wagner, Dirk; Alawi, Mashal

2017-01-01

The Cheb Basin (NW Bohemia, Czech Republic) is a shallow, neogene intracontinental basin. It is a non-volcanic region which features frequent earthquake swarms and large-scale diffuse degassing of mantle-derived CO2 at the surface that occurs in the form of CO2-rich mineral springs and wet and dry mofettes. So far, the influence of CO2 degassing onto the microbial communities has been studied for soil environments, but not for aquatic systems. We hypothesized, that deep-trenching CO2 conduits interconnect the subsurface with the surface. This admixture of deep thermal fluids should be reflected in geochemical parameters and in the microbial community compositions. In the present study four mineral water springs and two wet mofettes were investigated through an interdisciplinary survey. The waters were acidic and differed in terms of organic carbon and anion/cation concentrations. Element geochemical and isotope analyses of fluid components were used to verify the origin of the fluids. Prokaryotic communities were characterized through quantitative PCR and Illumina 16S rRNA gene sequencing. Putative chemolithotrophic, anaerobic and microaerophilic organisms connected to sulfur (e.g., Sulfuricurvum, Sulfurimonas) and iron (e.g., Gallionella, Sideroxydans) cycling shaped the core community. Additionally, CO2-influenced waters form an ecosystem containing many taxa that are usually found in marine or terrestrial subsurface ecosystems. Multivariate statistics highlighted the influence of environmental parameters such as pH, Fe2+ concentration and conductivity on species distribution. The hydrochemical and microbiological survey introduces a new perspective on mofettes. Our results support that mofettes are either analogs or rather windows into the deep biosphere and furthermore enable access to deeply buried paleo-sediments. PMID:29321765

The "Abyssal Society". François-Alphonse Forel and the Case of Deep Fauna in Late 19th Century.

PubMed

Campanella, Sara

2016-01-01

Ichthyological investigations and technological advancements, such as the laying of submarine telegraph cables, promoted new dredging methods in the second half of the 19th century. In contrast to the idea of a lifeless deep ocean (Edward Forbes' azoic hypothesis), the discovery of deep water fauna and the challenge of defining its systematics opened up new theoretical perspectives. In this frame, which was already marked by the impact of Darwin's theory, naturalistic surveys in freshwater environments in western Switzerland intertwined with those of oceanographic expeditions. The study of the fauna in the depths of subalpine lakes by the Swiss savant François-Alphonse Forel was one of the most striking examples of this turning point, because the relatively recently evolution of its freshwater fauna allowed him to investigate: (a) the role of isolation, (b) the progressive differentiation of species from a common ancestor, and (c) the constitution of a species-specific category in form transition, from a genealogical viewpoint to an ecological one.

Preface: Deep Slab and Mantle Dynamics

NASA Astrophysics Data System (ADS)

Suetsugu, Daisuke; Bina, Craig R.; Inoue, Toru; Wiens, Douglas A.

2010-11-01

We are pleased to publish this special issue of the journal Physics of the Earth and Planetary Interiors entitled "Deep Slab and Mantle Dynamics". This issue is an outgrowth of the international symposium "Deep Slab and Mantle Dynamics", which was held on February 25-27, 2009, in Kyoto, Japan. This symposium was organized by the "Stagnant Slab Project" (SSP) research group to present the results of the 5-year project and to facilitate intensive discussion with well-known international researchers in related fields. The SSP and the symposium were supported by a Grant-in-Aid for Scientific Research (16075101) from the Ministry of Education, Culture, Sports, Science and Technology of the Japanese Government. In the symposium, key issues discussed by participants included: transportation of water into the deep mantle and its role in slab-related dynamics; observational and experimental constraints on deep slab properties and the slab environment; modeling of slab stagnation to constrain its mechanisms in comparison with observational and experimental data; observational, experimental and modeling constraints on the fate of stagnant slabs; eventual accumulation of stagnant slabs on the core-mantle boundary and its geodynamic implications. This special issue is a collection of papers presented in the symposium and other papers related to the subject of the symposium. The collected papers provide an overview of the wide range of multidisciplinary studies of mantle dynamics, particularly in the context of subduction, stagnation, and the fate of deep slabs.

Breakup of last glacial deep stratification in the South Pacific

NASA Astrophysics Data System (ADS)

Basak, Chandranath; Fröllje, Henning; Lamy, Frank; Gersonde, Rainer; Benz, Verena; Anderson, Robert F.; Molina-Kescher, Mario; Pahnke, Katharina

2018-02-01

Stratification of the deep Southern Ocean during the Last Glacial Maximum is thought to have facilitated carbon storage and subsequent release during the deglaciation as stratification broke down, contributing to atmospheric CO2 rise. Here, we present neodymium isotope evidence from deep to abyssal waters in the South Pacific that confirms stratification of the deepwater column during the Last Glacial Maximum. The results indicate a glacial northward expansion of Ross Sea Bottom Water and a Southern Hemisphere climate trigger for the deglacial breakup of deep stratification. It highlights the important role of abyssal waters in sustaining a deep glacial carbon reservoir and Southern Hemisphere climate change as a prerequisite for the destabilization of the water column and hence the deglacial release of sequestered CO2 through upwelling.

Ocean science: Radiocarbon variability in the western North Atlantic during the last deglaciation

USGS Publications Warehouse

Robinson, L.F.; Adkins, J.F.; Keigwin, L.D.; Southon, J.; Fernandez, D.P.; Wang, S.-L.; Scheirer, D.S.

2005-01-01

We present a detailed history of glacial to Holocene radiocarbon in the deep western North Atlantic from deep-sea corals and paired benthic-planktonic foraminifera. The deglaciation is marked by switches between radiocarbon-enriched and -depleted waters, leading to large radiocarbon gradients in the water column. These changes played an important role in modulating atmospheric radiocarbon. The deep-ocean record supports the notion of a bipolar seesaw with increased Northern-source deep-water formation linked to Northern Hemisphere warming and the reverse. In contrast, the more frequent radiocarbon variations in the intermediate/deep ocean are associated with roughly synchronous changes at the poles.

Determination of water saturation using gas phase partitioning tracers and time-lapse electrical conductivity measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Timothy C.; Oostrom, Martinus; Truex, Michael J.

2013-05-21

Water saturation is an important indicator of contaminant distribution and plays a governing role in contaminant transport within the vadose zone. Understanding the water saturation distribution is critical for both remediation and contaminant flux monitoring in unsaturated environments. In this work we propose and demonstrate a method of remotely determining water saturation levels using gas phase partitioning tracers and time-lapse bulk electrical conductivity measurements. The theoretical development includes the partitioning chemistry for the tracers we demonstrate (ammonia and carbon dioxide), as well as a review of the petrophysical relationship governing how these tracers influence bulk conductivity. We also investigate methodsmore » of utilizing secondary information provided by electrical conductivity breakthrough magnitudes induced by the tracers. We test the method on clean, well characterized, intermediate-scale sand columns under controlled conditions. Results demonstrate the capability to predict partitioning coefficients and accurately monitor gas breakthrough curves along the length of the column according to the corresponding electrical conductivity response, leading to accurate water saturation estimates. This work is motivated by the need to develop effective characterization and monitoring techniques for contaminated deep vadose zone environments, and provides a proof-of-concept toward uniquely characterizing and monitoring water saturation levels at the field scale and in three-dimensions using electrical resistivity tomography.« less

30 CFR 203.2 - How can I obtain royalty relief?

Code of Federal Regulations, 2010 CFR

2010-07-01

... 203.49). (g) Located in a designated GOM shallow water area Drill and produce gas from an ultra-deep...) Located in a designated GOM deep water area (i.e., 200 meters or greater) and acquired in a lease sale... 203.79). (c) Located in a designated GOM deep water area and acquired in a lease sale held before...

Distribution of Quercus agrifolia mycorrhizae deep within weathered bedrock: a potential mechanism for transport of stored water

Treesearch

M. Bornyasz; R. Graham; M. Allen

2002-01-01

In southwestern California, Quercus agrifolia distribution closely matches regions of granitic regolith. High annual evapotranspiration demand and inherent shallow soil conditions lead to a dependence on a deep rooting system and an ability to access water from deep within the regolith. Most of the plant available water in weathered granitic rock is...

Dynamic behaviour of natural oil droplets through the water column in deep-water environment: the case of the Lower Congo Basin

NASA Astrophysics Data System (ADS)

Jatiault, R.; Dhont, D.; Loncke, L.; Durrieu De Madron, X.; Dubucq, D.; Channelliere, C.; Bourrin, F.

2017-12-01

Key words: Hydrocarbon seepage, Oil Slick, Lower Congo Basin, Underwater deflection, Deep-water Pockmark, Ascent speedThe space-borne imagery provides a significant means to locate active oil seeps and to estimate the expelled volume in the marine environment. The analysis of numerous overlapping satellite images revealed an abundant volume of 4400 m3 of oil naturally reaching the sea surface per year, expelled from more than a hundred seep sites through the Lower Congo Basin. The active seepage area is located in the distal compressional province of the basin where salt napes and squeezed diapirs. The integration of current data was used to link accurately sea surface manifestations of natural oil leakages with active fluid flow features on the seafloor. A mooring with ADCPs (Acoustic Doppler Current Profilers) distributed throughout the water column provided an efficient calibration tool to evaluate the horizontal deflection of oil droplets. Using a Eulerian propagation model that considered a range of probable ascent speeds, we estimated the oil migration pathways through the water column using two different approaches. The first approach consisted in simulating the backwards trajectory of oil droplets using sea surface oil slicks locations and concomitant current measurements. The second method analyzed the spatial spreading of the surfacing signatures of natural oil slicks based on 21 years of satellite observations. The location of the surfacing points of oil droplets at the sea surface is restricted to a circle of 2.5 km radius around the release point at the seafloor. Both approaches provided a range of ascent speeds of oil droplets between 3 to 8 cm.s-1. The low deflection values validate the near-vertical links between the average surfacing area of oil slicks at the sea surface with specific seafloor disturbances (i.e. pockmarks or mounds) known to expel fluids.

Analysis of Potential Deep-Seated Landslide in Hekeng Watershed by Environment Indices

NASA Astrophysics Data System (ADS)

Hsieh, C. J.; Chompuchan, C.

2014-12-01

Landslides are a major natural disaster in Taiwan relevant to the human life. After the catastrophic Xiaolin landslide during Typhoon Morakot in August 2009 caused around 400 casualties, the deep-seated landslide has become a serious issue. This study explored the potential deep-seated landslide in Hekeng watershed extracted from SPOT-5 imageries. The empirical topographic correction was applied to minimize effect of the mountain shaded area due to the difference of sun elevation and terrain angle. Consequently the multi-temporal environmental indices, i.e., modified Normalized Difference Vegetation Index (mNDVI) and modified Normalized Difference Water Index (mNDWI) were corrected. Seasonal vegetation cover and surface moisture change were analyzed incorporate with a slope which obtain from DEM data. The result showed that the distribution of potential deep-seated landslide vulnerable area mainly located at headstream watershed. It could be explained that the headstream watershed has less human interference, therefore the environmental indices interpreted those area as deep soil layer and dense vegetation coverage. However, the upstream canal could suffer from the long-term erosion and possibly cause slope toe collapse. In addition, the western watershed is the afforestation zone whereas the eastern watershed is natural forest zone with higher development ratio. The upslope forest management of eastern and western watershed should be discussed variously.

Benthic foraminiferal faunal and geochemical proxies as tracers for paleoenvironmental and paleoceanographic changes in the western Mediterranean over the last 24 ka

NASA Astrophysics Data System (ADS)

Pérez-Asensio, José N.; Cacho, Isabel; Frigola, Jaime; Pena, Leopoldo D.; Sierro, Francisco J.; Asioli, Alessandra; Kuhlmann, Jannis; Huhn, Katrin

2017-04-01

Paleoenvironmental and paleoceanographic changes in the western Mediterranean are reconstructed for the last 24 ka using a combination of benthic foraminiferal assemblages and geochemical proxies measured on benthic foraminiferal shells (Mg/Ca-deep water temperatures and stable isotopes). The studied materials are sediment cores HER-GC-UB06 and MD95-2043recovered at 946 m and 1841 m, respectively, from the Alboran Sea. At present, both core sites are bathed by the Western Mediterranean Deep Water (WMDW), although UB06 core is close to the boundary with the overlying Levantine Intermediate Water (LIW). Therefore, past variability of both water masses can potentially be recorded by the benthic foraminiferal proxies from the studied sites. Benthic foraminiferal assemblages and geochemical data show fluctuations in bottom-water ventilation, organic matter accumulation and deep-water temperatures related to WMDW and LIW circulation. During the glacial interval, an alternation of events showing better ventilation (higher abundance of Cibicides pachyderma) with lower temperatures and events of warmer deep water temperatures with poorer ventilation (Nonionella iridea assemblage, lower abundance of C. pachyderma) are observed. This variability might reflect stronger WMDW formation during the Last Glacial Maximum (LGM) and Heinrich Stadial 1. During the Bølling-Allerød and Younger Dryas (YD) periods, cold temperatures and the lowest oxygenation rates are recorded coinciding with the highest abundance of deep infaunal taxa on both UB06 and MD95-2043 cores. This interval was coetaneous to the deposition of an Organic Rich Layer in the Alboran Sea. However, a re-ventilation trend started at the end of the YD in the shallower site (UB06 core) whereas low-oxygen conditions prevailed until the end of the early Holocene in the deep site (MD95-2043 core). During the early Holocene a significant deep water temperature increase occurred at the shallower site suggesting the replacement of WMDW by warmer water mass, likely LIW. In the middle Holocene, highly variable bottom-water oxygenation and temperatures are observed showing warmer deep waters with less oxygen content (higher deep and intermediate infaunal abundances). The late Holocene (last 4 ka) was characterized by slightly cooler deep water temperatures and enhanced oxygen levels supporting that WMDW became dominant at the shallower site. These observations reveal that Mediterranean thermohaline system has been highly variable during the studied period supporting its high sensitivity to changing climate conditions. These results open a new insight into the Mediterranean sensitivity to Holocene climate variability.

Interacting vegetative and thermal contributions to water movement in desert soil

USGS Publications Warehouse

Garcia, C.A.; Andraski, Brian J.; Stonestrom, David A.; Cooper, C.A.; Šimůnek, J.; Wheatcraft, S.W.

2011-01-01

Thermally driven water-vapor flow can be an important component of total water movement in bare soil and in deep unsaturated zones, but this process is often neglected when considering the effects of soil–plant–atmosphere interactions on shallow water movement. The objectives of this study were to evaluate the coupled and separate effects of vegetative and thermal-gradient contributions to soil water movement in desert environments. The evaluation was done by comparing a series of simulations with and without vegetation and thermal forcing during a 4.7-yr period (May 2001–December 2005). For vegetated soil, evapotranspiration alone reduced root-zone (upper 1 m) moisture to a minimum value (25 mm) each year under both isothermal and nonisothermal conditions. Variations in the leaf area index altered the minimum storage values by up to 10 mm. For unvegetated isothermal and nonisothermal simulations, root-zone water storage nearly doubled during the simulation period and created a persistent driving force for downward liquid fluxes below the root zone (total net flux ~1 mm). Total soil water movement during the study period was dominated by thermally driven vapor fluxes. Thermally driven vapor flow and condensation supplemented moisture supplies to plant roots during the driest times of each year. The results show how nonisothermal flow is coupled with plant water uptake, potentially influencing ecohydrologic relations in desert environments.

Design of Omni Directional Remotely Operated Vehicle (ROV)

NASA Astrophysics Data System (ADS)

Rahimuddin; Hasan, Hasnawiya; Rivai, Haryanti A.; Iskandar, Yanu; Claudio, P.

2018-02-01

Nowadays, underwater activities are increased with the increase of oil resources finding. The gap between demand and supply of oil and gas cause engineers to find oil and gas resources in deep water. In other side, high risk of working in deep underwater environment can cause a dangerous situation for human. Therefore, many research activities are developing an underwater vehicle to replace the human’s work such as ROV or Remotely Operated Vehicles. The vehicle operated using tether to transport the signals and electric power from the surface vehicle. Arrangements of weight, buoyancy, and the propeller placements are significant aspect in designing the vehicle’s performance. This paper presents design concept of ROV for survey and observation the underwater objects with interaction vectored propellers used for vehicle’s motions.

Responses of the deep ocean carbonate system to carbon reorganization during the Last Glacial-interglacial cycle

NASA Astrophysics Data System (ADS)

Yu, Jimin; Anderson, Robert F.; Jin, Zhangdong; Rae, James W. B.; Opdyke, Bradley N.; Eggins, Stephen M.

2013-09-01

We present new deep water carbonate ion concentration ([CO32-]) records, reconstructed using Cibicidoides wuellerstorfi B/Ca, for one core from Caribbean Basin (water depth = 3623 m, sill depth = 1.8 km) and three cores located at 2.3-4.3 km water depth from the equatorial Pacific Ocean during the Last Glacial-interglacial cycle. The pattern of deep water [CO32-] in the Caribbean Basin roughly mirrors that of atmospheric CO2, reflecting a dominant influence from preformed [CO32-] in the North Atlantic Ocean. Compared to the amplitude of ˜65 μmol/kg in the deep Caribbean Basin, deep water [CO32-] in the equatorial Pacific Ocean has varied by no more than ˜15 μmol/kg due to effective buffering of CaCO3 on deep-sea pH in the Pacific Ocean. Our results suggest little change in the global mean deep ocean [CO32-] between the Last Glacial Maximum (LGM) and the Late Holocene. The three records from the Pacific Ocean show long-term increases in [CO32-] by ˜7 μmol/kg from Marine Isotope Stage (MIS) 5c to mid MIS 3, consistent with the response of the deep ocean carbonate system to a decline in neritic carbonate production associated with ˜60 m drop in sea-level (the “coral-reef” hypothesis). Superimposed upon the long-term trend, deep water [CO32-] in the Pacific Ocean displays transient changes, which decouple with δ13C in the same cores, at the start and end of MIS 4. These changes in [CO32-] and δ13C are consistent with what would be expected from vertical nutrient fractionation and carbonate compensation. The observed ˜4 μmol/kg [CO32-] decline in the two Pacific cores at >3.4 km water depth from MIS 3 to the LGM indicate further strengthening of deep ocean stratification, which contributed to the final step of atmospheric CO2 drawdown during the last glaciation. The striking similarity between deep water [CO32-] and 230Th-normalized CaCO3 flux at two adjacent sites from the central equatorial Pacific Ocean provides convincing evidence that deep-sea carbonate dissolution dominantly controlled CaCO3 preservation at these sites in the past. Our results offer new and quantitative constraints from deep ocean carbonate chemistry to understand roles of various mechanisms in atmospheric CO2 changes over the Last Glacial-interglacial cycle.

A major change in North Atlantic deep water circulation during the Early Pleistocene transition 1.6 million years ago

NASA Astrophysics Data System (ADS)

Khélifi, N.; Frank, M.

2013-12-01

The global ocean-climate system has been highly sensitive to the formation and advection of deep water in the North Atlantic but its evolution over the Pliocene-Pleistocene global cooling is not fully understood. In particular, changes in the sources and mixing of prevailing deep waters are not well constrained. Here we present new records of the bottom-water radiogenic neodymium isotope (ϵNd) variability obtained from three DSDP/ODP sites at water depths between 2100 and 5000 m in the Northeast Atlantic to reconstruct changes in deep water circulation over the past 4 million years. Prior to 1.6 million years ago (Ma), we find ϵNd values primarily oscillating between -9 and -11 at all sites, consistent with enhanced vertical mixing of water masses. At 1.6 Ma, the ϵNd signatures synchronously shifted to less radiogenic values around -12 at different water depths and water mass signatures gradually became more distinct. Since then values and amplitudes of "glacial/interglacial" ϵNd oscillations have been similar to the Late Quaternary at each site. This change 1.6 Ma reflects a major reorganization of deep water circulation in the Northeast Atlantic towards a more stratified water column with distinct water masses accompanying the enhanced response of climate to the Earth's obliquity forcing during the Early Pleistocene transition.

Surface oceanographic fronts influencing deep-sea biological activity: Using fish stable isotopes as ecological tracers

NASA Astrophysics Data System (ADS)

Louzao, Maite; Navarro, Joan; Delgado-Huertas, Antonio; de Sola, Luis Gil; Forero, Manuela G.

2017-06-01

Ecotones can be described as transition zones between neighbouring ecological systems that can be shaped by environmental gradients over a range of space and time scales. In the marine environment, the detection of ecotones is complex given the highly dynamic nature of marine systems and the paucity of empirical data over ocean-basin scales. One approach to overcome these limitations is to use stable isotopes from animal tissues since they can track spatial oceanographic variability across marine systems and, in turn, can be used as ecological tracers. Here, we analysed stable isotopes of deep-sea fishes to assess the presence of ecological discontinuities across the western Mediterranean. We were specifically interested in exploring the connection between deep-sea biological activity and particular oceanographic features (i.e., surface fronts) occurring in the pelagic domain. We collected samples for three different abundant deep-sea species in May 2004 from an experimental oceanographic trawling cruise (MEDITS): the Mictophydae jewel lanternfish Lampanyctus crocodilus and two species of the Gadidae family, the silvery pout Gadiculus argenteus and the blue whiting Micromesistius poutassou. The experimental survey occurred along the Iberian continental shelf and the upper and middle slopes, from the Strait of Gibraltar in the SW to the Cape Creus in the NE. The three deep-sea species were highly abundant throughout the study area and they showed geographic variation in their isotopic values, with decreasing values from north to south disrupted by an important change point around the Vera Gulf. Isotopic latitudinal gradients were explained by pelagic oceanographic conditions along the study area and confirm the existence of an ecotone at the Vera Gulf. This area could be considered as an oceanographic boundary where waters of Atlantic origin meet Mediterranean surface waters forming important frontal structures such as the Almeria-Oran front. In fact, our results relate geographical variation in stable isotopes of deep-sea fishes to regional changes in surface oceanography, highlighting the importance of mesoscale oceanographic features.

Combining numerical modeling and stable isotope values to quantify groundwater recharge from the Chilean Andes to the Pampa del Tamarugal Basin, Atacama Desert, northern Chile

NASA Astrophysics Data System (ADS)

Dodd, J. P.; Pollyea, R.

2014-12-01

The Atacama Desert of northern Chile is one of the driest regions on Earth and receives less than 5mm of precipitation annually. The Pampa del Tamarugal (PdT) Basin contains the largest aquifer system in the region, yet the mechanisms and timing of aquifer recharge and continental-scale groundwater flux are poorly understood. Although there is little debate that the source of groundwater recharge is the higher elevation regions of the Andean Altiplano to the east of the PdT Basin, there remains much uncertainty surrounding the mechanisms and timing of aquifer recharge and continental-scale groundwater flux. Most recharge models of the PdT focus on surface water runoff and alluvial fan recharge on shorter time scales, but many of these models explicitly neglect deep flow pathways. Previous investigators have combined the thermal aquifer profile and 14C groundwater ages to propose an alternative conceptual model in which cold meteoric water infiltrates deep into the Cordillera before circulating upward into the PdT by thermal convection through fault-controlled migration pathways. Although this conceptual model provides a convincing theoretical argument for deep fluid circulation, it cannot constrain the magnitude of this deep recharge flux. In this work, we revisit deep-flow conceptual model by combining the spatial distribution of hydrogen and oxygen isotope values as groundwater tracers with a non-isothermal model of continental scale groundwater flow through a two-dimensional transect from the Chilean Andes to the PdT Basin. This work provides first-order estimates on the contribution of deep groundwater circulation within the PdT Aquifer, while providing a framework for (1) quantifying boundary conditions for high resolution models of groundwater resources within the PdT Aquifer, (2) assessing the influence of variable future climate scenarios for groundwater availability in the region, and (3) further integrating conservative tracers and numerical models for groundwater resource evaluation in hyperarid environments.

Deep-water kelp refugia as potential hotspots of tropical marine diversity and productivity.

PubMed

Graham, Michael H; Kinlan, Brian P; Druehl, Louis D; Garske, Lauren E; Banks, Stuart

2007-10-16

Classic marine ecological paradigms view kelp forests as inherently temperate-boreal phenomena replaced by coral reefs in tropical waters. These paradigms hinge on the notion that tropical surface waters are too warm and nutrient-depleted to support kelp productivity and survival. We present a synthetic oceanographic and ecophysiological model that accurately identifies all known kelp populations and, by using the same criteria, predicts the existence of >23,500 km(2) unexplored submerged (30- to 200-m depth) tropical kelp habitats. Predicted tropical kelp habitats were most probable in regions where bathymetry and upwelling resulted in mixed-layer shoaling above the depth of minimum annual irradiance dose for kelp survival. Using model predictions, we discovered extensive new deep-water Eisenia galapagensis populations in the Galápagos that increased in abundance with increasing depth to >60 m, complete with cold-water flora and fauna of temperate affinities. The predictability of deep-water kelp habitat and the discovery of expansive deep-water Galápagos kelp forests validate the extent of deep-water tropical kelp refugia, with potential implications for regional productivity and biodiversity, tropical food web ecology, and understanding of the resilience of tropical marine systems to climate change.

Comparison of ground-water quality in samples from selected shallow and deep wells in the central Oklahoma aquifer, 2003-2005

USGS Publications Warehouse

Becker, Carol J.

2006-01-01

The aquifer units of the Central Oklahoma aquifer underlie about 2,890 square miles of central Oklahoma and are used extensively to supply water for municipal, domestic, industrial, and agricultural needs. The Central Oklahoma aquifer also is commonly referred to as the Garber-Wellington aquifer because the Garber Sandstone and Wellington Formation yield the greatest quantities of usable water for domestic and high-capacity wells. The major water-quality concerns for the Central Oklahoma aquifer described by the U.S. Geological Survey National Water Quality Assessment Program (1987 to 1992) were elevated concentrations of nitrate nitrogen in shallow water and the occurrence of arsenic, chromium, and selenium in parts of the aquifer. The quality of water from deep public-water supply wells in the Central Oklahoma aquifer is monitored by the State of Oklahoma. The chemical quality of water from shallow domestic wells is not monitored, and, therefore, there is a concern that well owners may be unknowingly ingesting water with nitrate nitrogen, arsenic, chromium, selenium, and other chemical constituents at concentrations that are considered harmful. As a result of this concern, the Oklahoma Department of Environmental Quality and the U.S. Geological Survey collaborated on a study to sample water during June 2003 through August 2005 from 23 shallow wells (less than 200 feet in depth) and 28 deep wells (200 feet or greater in depth) completed in the bedrock aquifer units of the Central Oklahoma aquifer. The objectives of the study were to describe the chemical quality of water from shallow and deep wells and to determine if the differences in constituent concentrations are statistically significant. Water from shallow wells had significantly higher concentrations of calcium, magnesium, bicarbonate, sulfate, chloride, and nitrate nitrogen than water from deep wells. There were no significant differences between concentrations of dissolved solids, sodium, and fluoride in water from shallow and deep wells. Water from 9 shallow wells had nitrate nitrogen concentrations greater than 2 milligrams per liter, suggesting nitrogen sources at land surface have had an effect on water from these wells. Water from three shallow wells (13 percent) exceeded the nitrate nitrogen maximum contaminant level of 10 milligrams per liter in drinking water. Water from shallow wells had significantly lower concentrations of arsenic, chromium, iron, and selenium than water from deep wells, whereas, concentrations of barium, copper, manganese, and zinc were similar. Water-quality data indicate that arsenic frequently occurs in shallow ground water from the Central Oklahoma aquifer, but at low concentrations (<10 micrograms per liter). The occurrence of chromium and selenium in water from shallow wells was infrequent and at low concentrations in this study. It does not appear that the quality of water from a shallow well can be predicted based on the quality of water from a nearby deep well. The results show that in general terms, shallow ground water has significantly higher concentrations of most major ions and significantly lower concentrations of arsenic, chromium, and selenium than water from deep wells.

Space Radiation Transport Codes: A Comparative Study for Galactic Cosmic Rays Environment

NASA Astrophysics Data System (ADS)

Tripathi, Ram; Wilson, John W.; Townsend, Lawrence W.; Gabriel, Tony; Pinsky, Lawrence S.; Slaba, Tony

For long duration and/or deep space human missions, protection from severe space radiation exposure is a challenging design constraint and may be a potential limiting factor. The space radiation environment consists of galactic cosmic rays (GCR), solar particle events (SPE), trapped radiation, and includes ions of all the known elements over a very broad energy range. These ions penetrate spacecraft materials producing nuclear fragments and secondary particles that damage biological tissues, microelectronic devices, and materials. In deep space missions, where the Earth's magnetic field does not provide protection from space radiation, the GCR environment is significantly enhanced due to the absence of geomagnetic cut-off and is a major component of radiation exposure. Accurate risk assessments critically depend on the accuracy of the input information as well as radiation transport codes used, and so systematic verification of codes is necessary. In this study, comparisons are made between the deterministic code HZETRN2006 and the Monte Carlo codes HETC-HEDS and FLUKA for an aluminum shield followed by a water target exposed to the 1977 solar minimum GCR spectrum. Interaction and transport of high charge ions present in GCR radiation environment provide a more stringent constraint in the comparison of the codes. Dose, dose equivalent and flux spectra are compared; details of the comparisons will be discussed, and conclusions will be drawn for future directions.

Cultivation Of Deep Subsurface Microbial Communities

NASA Astrophysics Data System (ADS)

Obrzut, Natalia; Casar, Caitlin; Osburn, Magdalena R.

2018-01-01

The potential habitability of surface environments on other planets in our solar system is limited by exposure to extreme radiation and desiccation. In contrast, subsurface environments may offer protection from these stressors and are potential reservoirs for liquid water and energy that support microbial life (Michalski et al., 2013) and are thus of interest to the astrobiology community. The samples used in this project were extracted from the Deep Mine Microbial Observatory (DeMMO) in the former Homestake Mine at depths of 800 to 2000 feet underground (Osburn et al., 2014). Phylogenetic data from these sites indicates the lack of cultured representatives within the community. We used geochemical data to guide media design to cultivate and isolate organisms from the DeMMO communities. Media used for cultivation varied from heterotrophic with oxygen, nitrate or sulfate to autotrophic media with ammonia or ferrous iron. Environmental fluid was used as inoculum in batch cultivation and strains were isolated via serial transfers or dilution to extinction. These methods resulted in isolating aerobic heterotrophs, nitrate reducers, sulfate reducers, ammonia oxidizers, and ferric iron reducers. DNA sequencing of these strains is underway to confirm which species they belong to. This project is part of the NASA Astrobiology Institute Life Underground initiative to detect and characterize subsurface microbial life; by characterizing the intraterrestrials, the life living deep within Earth’s crust, we aim to understand the controls on how and where life survives in subsurface settings. Cultivation of terrestrial deep subsurface microbes will provide insight into the survival mechanisms of intraterrestrials guiding the search for these life forms on other planets.

Soil moisture depletion under simulated drought in the Amazon: impacts on deep root uptake.

PubMed

Markewitz, Daniel; Devine, Scott; Davidson, Eric A; Brando, Paulo; Nepstad, Daniel C

2010-08-01

*Deep root water uptake in tropical Amazonian forests has been a major discovery during the last 15 yr. However, the effects of extended droughts, which may increase with climate change, on deep soil moisture utilization remain uncertain. *The current study utilized a 1999-2005 record of volumetric water content (VWC) under a throughfall exclusion experiment to calibrate a one-dimensional model of the hydrologic system to estimate VWC, and to quantify the rate of root uptake through 11.5 m of soil. *Simulations with root uptake compensation had a relative root mean square error (RRMSE) of 11% at 0-40 cm and < 5% at 350-1150 cm. The simulated contribution of deep root uptake under the control was c. 20% of water demand from 250 to 550 cm and c. 10% from 550 to 1150 cm. Furthermore, in years 2 (2001) and 3 (2002) of throughfall exclusion, deep root uptake increased as soil moisture was available but then declined to near zero in deep layers in 2003 and 2004. *Deep root uptake was limited despite high VWC (i.e. > 0.30 cm(3) cm(-3)). This limitation may partly be attributable to high residual water contents (theta(r)) in these high-clay (70-90%) soils or due to high soil-to-root resistance. The ability of deep roots and soils to contribute increasing amounts of water with extended drought will be limited.

Using environmental isotopes along with major hydro-geochemical compositions to assess deep groundwater formation and evolution in eastern coastal China

NASA Astrophysics Data System (ADS)

Xu, Naizheng; Gong, Jianshi; Yang, Guoqiang

2018-01-01

Hydrochemical analysis and environmental isotopic tracing are successfully applied to study groundwater evolution processes. Located in eastern China, the Jiangsu Coastal Plain is characterized by an extensively exploited deep groundwater system, and groundwater salinization has become the primary water environmental problem. This paper provides a case study on the use of a hydrochemical and environmental isotopic approach to assess possible mixing and evolution processes at Yoco Port, Jiangsu Province, China. Hydrochemical and isotopic patterns of deep groundwater allow one to distinguish different origins in deep water systems. HCO3- is the dominant anion in the freshwater samples, whereas Na+ and Cl- are the dominant major ions in the saline samples. According to δ18O, δ2H and 14C dating, the fresh water is derived from precipitation under a colder climate during the Glacial Maximum (Dali Glacial), while the saline groundwater is influenced by glacial-interglacial cycles during the Holocene Hypsithermal. The δ18O, δ2H and 3H data confirm that deep groundwater in some boreholes is mixed with overlying saline water. The deep groundwater reservoir can be divided into a saline water sector and a fresh water sector, and each show distinct hydrochemical and isotopic compositions. The saline groundwater found in the deep aquifer cannot be associated with present seawater intrusion. Since the Last Glacial Maximum in the Late Pleistocene, the deep groundwater flow system has evolved to its current status with the decrease in ice cover and the rising of sea level. However, the hydraulic connection is strengthened by continuous overexploitation, and deep groundwater is mixed with shallow groundwater at some points.

Antarctic climate, Southern Ocean circulation patterns, and deep water formation during the Eocene

NASA Astrophysics Data System (ADS)

Huck, Claire E.; van de Flierdt, Tina; Bohaty, Steven M.; Hammond, Samantha J.

2017-07-01

We assess early-to-middle Eocene seawater neodymium (Nd) isotope records from seven Southern Ocean deep-sea drill sites to evaluate the role of Southern Ocean circulation in long-term Cenozoic climate change. Our study sites are strategically located on either side of the Tasman Gateway and are positioned at a range of shallow (<500 m) to intermediate/deep ( 1000-2500 m) paleowater depths. Unradiogenic seawater Nd isotopic compositions, reconstructed from fish teeth at intermediate/deep Indian Ocean pelagic sites (Ocean Drilling Program (ODP) Sites 738 and 757 and Deep Sea Drilling Project (DSDP) Site 264), indicate a dominant Southern Ocean-sourced contribution to regional deep waters (ɛNd(t) = -9.3 ± 1.5). IODP Site U1356 off the coast of Adélie Land, a locus of modern-day Antarctic Bottom Water production, is identified as a site of persistent deep water formation from the early Eocene to the Oligocene. East of the Tasman Gateway an additional local source of intermediate/deep water formation is inferred at ODP Site 277 in the SW Pacific Ocean (ɛNd(t) = -8.7 ± 1.5). Antarctic-proximal shelf sites (ODP Site 1171 and Site U1356) reveal a pronounced erosional event between 49 and 48 Ma, manifested by 2 ɛNd unit negative excursions in seawater chemistry toward the composition of bulk sediments at these sites. This erosional event coincides with the termination of peak global warmth following the Early Eocene Climatic Optimum and is associated with documented cooling across the study region and increased export of Antarctic deep waters, highlighting the complexity and importance of Southern Ocean circulation in the greenhouse climate of the Eocene.

Using environmental isotopes along with major hydro-geochemical compositions to assess deep groundwater formation and evolution in eastern coastal China.

PubMed

Xu, Naizheng; Gong, Jianshi; Yang, Guoqiang

2018-01-01

Hydrochemical analysis and environmental isotopic tracing are successfully applied to study groundwater evolution processes. Located in eastern China, the Jiangsu Coastal Plain is characterized by an extensively exploited deep groundwater system, and groundwater salinization has become the primary water environmental problem. This paper provides a case study on the use of a hydrochemical and environmental isotopic approach to assess possible mixing and evolution processes at Yoco Port, Jiangsu Province, China. Hydrochemical and isotopic patterns of deep groundwater allow one to distinguish different origins in deep water systems. HCO 3 - is the dominant anion in the freshwater samples, whereas Na + and Cl - are the dominant major ions in the saline samples. According to δ 18 O, δ 2 H and 14 C dating, the fresh water is derived from precipitation under a colder climate during the Glacial Maximum (Dali Glacial), while the saline groundwater is influenced by glacial-interglacial cycles during the Holocene Hypsithermal. The δ 18 O, δ 2 H and 3 H data confirm that deep groundwater in some boreholes is mixed with overlying saline water. The deep groundwater reservoir can be divided into a saline water sector and a fresh water sector, and each show distinct hydrochemical and isotopic compositions. The saline groundwater found in the deep aquifer cannot be associated with present seawater intrusion. Since the Last Glacial Maximum in the Late Pleistocene, the deep groundwater flow system has evolved to its current status with the decrease in ice cover and the rising of sea level. However, the hydraulic connection is strengthened by continuous overexploitation, and deep groundwater is mixed with shallow groundwater at some points. Copyright © 2017 Elsevier B.V. All rights reserved.

viral abundance distribution in deep waters of the Northern of South China Sea

NASA Astrophysics Data System (ADS)

He, Lei; Yin, Kedong

2017-04-01

Little is known about the vertical distribution and interaction of viruses and bacteria in the deep ocean water column. The vertical distribution of viral-like particles and bacterial abundance was investigated in the deep water column in the South China Sea during September 2005 along with salinity, temperature and dissolved oxygen. There were double maxima in the ratio of viral to bacterial abundance (VBR) in the water column: the subsurface maximum located at 50-100 m near the pycnocline layer, and the deep maximum at 800-1000 m. At the subsurface maximum of VBR, both viral and bacterial abundance were maximal in the water column, and at the deep maximum of VBR, both viral and bacterial abundance were low, but bacterial abundance was relatively lower than viral abundance. The subsurface VBR maximum coincided with the subsurface chlorophyll maximum while the deep VBR maximum coincided with the minimum in dissolved oxygen (2.91mg L-1). Therefore, we hypothesize that the two maxima were formed by different mechanisms. The subsurface VBR maximum was formed due to an increase in bacterial abundance resulting from the stimulation of abundant organic supply at the subsurface chlorophyll maximum, whereas the deep VBR maximum was formed due to a decrease in bacterial abundance caused by more limitation of organic matter at the oxygen minimum. The evidence suggests that viruses play an important role in controlling bacterial abundance in the deep water column due to the limitation of organic matter supply. In turn, this slows down the formation of the oxygen minimum in which oxygen may be otherwise lower. The mechanism has a great implication that viruses could control bacterial decomposition of organic matter, oxygen consumption and nutrient remineralization in the deep oceans.

Developmental plasticity of shell morphology of quagga mussels from shallow and deep-water habitats of the Great Lakes

Treesearch

Suzanne Peyer; John C. Hermanson; Carol Eunmi Lee

2010-01-01

The invasive zebra mussel (Dreissena polymorpha) has quickly colonized shallow-water habitats in the North American Great Lakes since the 1980s but the quagga mussel (Dreissena bugensis) is becoming dominant in both shallow and deep-water habitats. While quagga mussel shell morphology differs between shallow and deep habitats, functional causes and consequences of such...

First biological measurements of deep-sea corals from the Red Sea

PubMed Central

Roder, C.; Berumen, M. L.; Bouwmeester, J.; Papathanassiou, E.; Al-Suwailem, A.; Voolstra, C. R.

2013-01-01

It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with ‘deep-sea’ and ‘cold-water’ corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key adaptations to prevailing environmental conditions. We investigated four sites and encountered six species of which at least two appear to be undescribed. One species is previously reported from the Red Sea but occurs in deep cold waters outside the Red Sea raising interesting questions about presumed environmental constraints for other deep-sea corals. Our findings suggest that the present understanding of deep-sea coral persistence and resilience needs to be revisited. PMID:24091830

Interannual variability (1979-2013) of the North-Western Mediterranean deep water mass formation: past observation reanalysis and coupled ocean-atmosphere high-resolution modelling

NASA Astrophysics Data System (ADS)

Somot, Samuel; Houpert, Loic; Sevault, Florence; Testor, Pierre; Bosse, Anthony; Durrieu de Madron, Xavier; Dubois, Clotilde; Herrmann, Marine; Waldman, Robin; Bouin, Marie-Noëlle; Cassou, Christophe

2015-04-01

The North-Western Mediterranean Sea is known as one of the only place in the world where open-sea deep convection occurs (often up to more than 2000m) with the formation of the Western Mediterranean Deep Water (WMDW). This phenomena is mostly driven by local preconditioning of the water column and strong buoyancy losses during Winter. At the event scale, the WMDW formation is characterized by different phases (preconditioning, strong mixing, restratification and spreading), intense air-sea interaction and strong meso-scale activity but, on a longer time scale, it also shows a large interannual variability and may be strongly affected by climate change with impact on the regional biogeochemistry. Therefore observing, simulating and understanding the long-term temporal variability of the North-Western Mediterranean deep water formation is still today a very challenging task. We try here to tackle those issues thanks to (1) a thorough reanalysis of past in-situ observations (CTD, Argo, surface and deep moorings, gliders) and (2) an ERA-Interim driven simulation using a recently-developed fully coupled Regional Climate System Model (CNRM-RCSM4, Sevault et al. 2014). The multi-decadal simulation (1979-2013) is designed to be temporally and spatially homogeneous with a realistic chronology, a high resolution representation of both the regional ocean and atmosphere, specific initial conditions, a long-term spin-up and a full ocean-atmosphere coupling without constraint at the air-sea interface. The observation reanalysis allows to reconstruct interannual time series of deep water formation indicators (ocean surface variables, mixed layer depth, surface of the convective area, dense water volumes and characteristics of the deep water). Using the observation-based indicators and the model outputs, the 34 Winters of the period 1979-2013 are analysed in terms of weather regimes, related Winter air-sea fluxes, ocean preconditioning, mixed layer depth, surface of the convective area, deep water formation rate and long-term evolution of the deep water hydrology.

Self-repairing properties of OPC clinker/natural zeolite blend in water and alkali carbonate environments at 270°C

DOE PAGES

Pyatina, Tatiana; Sugama, Toshifumi; Ronne, Arthur; ...

2018-01-01

The 10 d recoveries of the mechanical properties and crack sealing of an ordinary Portland cement (OPC) clinker/natural zeolite (ferrierite (Fer)) blend modified or unmodified with silica were tested at 270°C in water and alkali carbonate environments. The recoveries of the samples depended on their modification with silica and the curing environment, but were more than 100% after repeated damage under some test conditions. The mechanical properties and phase compositions of recovered samples were evaluated by compressive strength measurements and x-ray diffraction, differential thermogravimetric analyses, Fourier transform infrared analyses and scanning electron microscopy coupled with energy dispersive x-ray spectroscopy. Themore » sealing of 0·25 mm wide and ~2 mm deep cracks was visualised with a three-dimensional optical microscope. Fer decomposed under high-temperature alkaline conditions with the release of hydrolysates that, along with the hydrating clinker, participated in the formation of new phases contributing to strength recoveries. Here, these phases included crystalline magnesium and aluminium-containing silicates, calcium and carbonated calcium silicates and amorphous hydrates. Crack sealing was complete for the silica-modified samples and partial for unmodified ones cured in carbonate environments. The sealing was very poor for samples cured in water. Lastly, the main sealing phases included crystalline and amorphous silica, high-temperature-stable zeolites and talc mineral.« less

Self-repairing properties of OPC clinker/natural zeolite blend in water and alkali carbonate environments at 270°C

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pyatina, Tatiana; Sugama, Toshifumi; Ronne, Arthur

The 10 d recoveries of the mechanical properties and crack sealing of an ordinary Portland cement (OPC) clinker/natural zeolite (ferrierite (Fer)) blend modified or unmodified with silica were tested at 270°C in water and alkali carbonate environments. The recoveries of the samples depended on their modification with silica and the curing environment, but were more than 100% after repeated damage under some test conditions. The mechanical properties and phase compositions of recovered samples were evaluated by compressive strength measurements and x-ray diffraction, differential thermogravimetric analyses, Fourier transform infrared analyses and scanning electron microscopy coupled with energy dispersive x-ray spectroscopy. Themore » sealing of 0·25 mm wide and ~2 mm deep cracks was visualised with a three-dimensional optical microscope. Fer decomposed under high-temperature alkaline conditions with the release of hydrolysates that, along with the hydrating clinker, participated in the formation of new phases contributing to strength recoveries. Here, these phases included crystalline magnesium and aluminium-containing silicates, calcium and carbonated calcium silicates and amorphous hydrates. Crack sealing was complete for the silica-modified samples and partial for unmodified ones cured in carbonate environments. The sealing was very poor for samples cured in water. Lastly, the main sealing phases included crystalline and amorphous silica, high-temperature-stable zeolites and talc mineral.« less

Assessing the effects of ultraviolet radiation on the photosynthetic potential in Archean marine environments

NASA Astrophysics Data System (ADS)

Avila-Alonso, Dailé; Baetens, Jan M.; Cardenas, Rolando; de Baets, Bernard

2017-07-01

In this work, the photosynthesis model presented by Avila et al. in 2013 is extended and more scenarios inhabited by ancient cyanobacteria are investigated to quantify the effects of ultraviolet (UV) radiation on their photosynthetic potential in marine environments of the Archean eon. We consider ferrous ions as blockers of UV during the Early Archean, while the absorption spectrum of chlorophyll a is used to quantify the fraction of photosynthetically active radiation absorbed by photosynthetic organisms. UV could have induced photoinhibition at the water surface, thereby strongly affecting the species with low light use efficiency. A higher photosynthetic potential in early marine environments was shown than in the Late Archean as a consequence of the attenuation of UVC and UVB by iron ions, which probably played an important role in the protection of ancient free-floating bacteria from high-intensity UV radiation. Photosynthetic organisms in Archean coastal and ocean environments were probably abundant in the first 5 and 25 m of the water column, respectively. However, species with a relatively high efficiency in the use of light could have inhabited ocean waters up to a depth of 200 m and show a Deep Chlorophyll Maximum near 60 m depth. We show that the electromagnetic radiation from the Sun, both UV and visible light, could have determined the vertical distribution of Archean marine photosynthetic organisms.

Water balance at a low-level radioactive-waste disposal site

USGS Publications Warehouse

Healy, R.W.; Gray, J.R.; De Vries, G. M.; Mills, P.C.

1989-01-01

The water balance at a low-level radioactive-waste disposal site in northwestern Illinois was studied from July 1982 through June 1984. Continuous data collection allowed estimates to be made for each component of the water-balance equation independent of other components. The average annual precipitation was 948 millimeters. Average annual evapotranspiration was estimated at 637 millimeters, runoff was 160 millimeters, change in water storage in a waste-trench cover was 24 millimeters, and deep percolation was 208 millimeters. The magnitude of the difference between precipitation and all other components (81 millimeters per year) indicates that, in a similar environment, the water-budget method would be useful in estimating evapotranspiration, but questionable for estimation of other components. Precipitation depth and temporal distribution had a very strong effect on all other components of the water-balance equation. Due to the variability of precipitation from year to year, it appears that two years of data are inadequate for characterization of the long-term average water balance at the site.

Novel microbial diversity retrieved by autonomous robotic exploration of the world's deepest vertical phreatic sinkhole.

PubMed

Sahl, Jason W; Fairfield, Nathaniel; Harris, J Kirk; Wettergreen, David; Stone, William C; Spear, John R

2010-03-01

The deep phreatic thermal explorer (DEPTHX) is an autonomous underwater vehicle designed to navigate an unexplored environment, generate high-resolution three-dimensional (3-D) maps, collect biological samples based on an autonomous sampling decision, and return to its origin. In the spring of 2007, DEPTHX was deployed in Zacatón, a deep (approximately 318 m), limestone, phreatic sinkhole (cenote) in northeastern Mexico. As DEPTHX descended, it generated a 3-D map based on the processing of range data from 54 onboard sonars. The vehicle collected water column samples and wall biomat samples throughout the depth profile of the cenote. Post-expedition sample analysis via comparative analysis of 16S rRNA gene sequences revealed a wealth of microbial diversity. Traditional Sanger gene sequencing combined with a barcoded-amplicon pyrosequencing approach revealed novel, phylum-level lineages from the domains Bacteria and Archaea; in addition, several novel subphylum lineages were also identified. Overall, DEPTHX successfully navigated and mapped Zacatón, and collected biological samples based on an autonomous decision, which revealed novel microbial diversity in a previously unexplored environment.

Modelling of processes occurring in deep geological repository - Development of new modules in the GoldSim environment

NASA Astrophysics Data System (ADS)

Vopálka, D.; Lukin, D.; Vokál, A.

2006-01-01

Three new modules modelling the processes that occur in a deep geological repository have been prepared in the GoldSim computer code environment (using its Transport Module). These modules help to understand the role of selected parameters in the near-field region of the final repository and to prepare an own complex model of the repository behaviour. The source term module includes radioactive decay and ingrowth in the canister, first order degradation of fuel matrix, solubility limitation of the concentration of the studied nuclides, and diffusive migration through the surrounding bentonite layer controlled by the output boundary condition formulated with respect to the rate of water flow in the rock. The corrosion module describes corrosion of canisters made of carbon steel and transport of corrosion products in the near-field region. This module computes balance equations between dissolving species and species transported by diffusion and/or advection from the surface of a solid material. The diffusion module that includes also non-linear form of the interaction isotherm can be used for an evaluation of small-scale diffusion experiments.

The Physiology and Ecology of Diapause in Marine Copepods.

PubMed

Baumgartner, Mark F; Tarrant, Ann M

2017-01-03

Diapause is a type of dormancy that requires preparation, typically precedes the onset of unfavorable conditions, and necessitates a period of arrest before development can proceed. Two ecologically important groups of copepods have incorporated diapausing stages into their life histories. In freshwater, estuarine, and coastal environments, species within the Centropagoidea superfamily can produce resting eggs containing embryos that may be quiescent, diapausing, or in some intermediate state. Resting eggs sink into the sediments, remain viable over months to years, and form a reservoir from which the planktonic population is reestablished. In coastal and oceanic environments, copepods within the Calanidae and Eucalanidae families can enter diapause during late juvenile (copepodid) or adult stages. These copepods accumulate large amounts of lipids before they migrate into deep water and diapause for several months. Through respiration, diapausing copepods may sequester more carbon in the deep ocean than any other biogeochemical process, and changes in diapause phenology associated with climate change (particularly reduction in diapause duration) could have a significant impact not only on regional ecosystems, but on global climate as well.

Radium Adsorption to Iron Bearing Minerals in Variable Salinity Waters

NASA Astrophysics Data System (ADS)

Chen, M.; Kocar, B. D.

2014-12-01

Radium is a common, naturally occurring radioactive metal found in many subsurface environments. Radium isotopes are a product of natural uranium and thorium decay, and are particularly abundant within groundwaters where minimal flux leads to accumulation within porewaters. Radium has been used as a natural tracer to estimate submarine groundwater discharge (SGD) [1], where the ratios of various radium isotopes are used to estimate total groundwater flux to and from the ocean [2]. Further, it represents a substantial hazard in waste water produced after hydraulic fracturing for natural gas extraction [3], resulting in a significant risk of environmental release and increased cost for water treatment or disposal. Adsorption to mineral surfaces represents a primary pathway of radium retention within subsurface environments. For SGD studies, it is important to understand adsorption processes to correctly estimate GW fluxes, while in hydraulic fracturing, radium adsorption to aquifer solids will mediate the activities of radium within produced water. While some studies of radium adsorption to various minerals have been performed [4], there is a limited understanding of the surface chemistry of radium adsorption, particularly to iron-bearing minerals such as pyrite, goethite and ferrihydrite. Accordingly, we present the results of sorption experiments of radium to a suite of iron-bearing minerals representative of those found within deep saline and near-surface (freshwater) aquifers, and evaluate impacts of varying salinity solutions through the use of artificial groundwater, seawater, and shale formation brine. Further, we explore the impacts of pyrite oxidation and ferrihydrite transformation to other iron-bearing secondary minerals on the retention of radium. This work lays the groundwork for further study of radium use as a tracer for SGD, as well as understanding mechanisms of radium retention and release from deep aquifer materials following hydraulic fracturing operations. [1] Charette, M.A., Buesseler, K.O. & Andrews, J.E., Limnol. Oceanogr. 46, 465-470 (2001). [2] Moore, W.S., Ann. Rev. Mar. Sci. 2, 59-88 (2010). [3] Vengosh, A., Jackson, R.B., Warner, N., Darrah, T.H. & Kondash, Environ. Sci. Technol., (2014). [4] Ames, L.L, McGarrah, J., & Walker, B., Clays Clay Miner. 31, 335-342 (1983).

Sedimentary environments within a glaciated estuarine-inner shelf system: Boston Harbor and Massachusetts Bay

USGS Publications Warehouse

Knebel, H.J.

1993-01-01

Three modern sedimentary environments have been identified and mapped across the glaciated Boston Harbor estuary and adjacent inner shelf of Massachusetts Bay by means of an extensive set of sidescan sonar records and supplemental bathymetric, sedimentary, subbottom and bottom-current data. 1. (1) Environments of erosion and nondeposition appear on the sonographs either as patterns with isolated reflections (caused by outcrops of bedrock, glacial drift, and coastal plain rocks) or as patterns of strong backscatter (caused by coarse-grained lag deposits). Sediments in these environments range from boulder fields to gravelly sands with megaripples. Inside the harbor, areas of erosion or nondeposition are found primarily near mainland and insular shores and within constricted tidal channels, whereas, on the shelf, they are present over extensive areas of hummocky topography near the coast and atop local bathymetric highs offshore. 2. (2) Environments of sediment reworking are characterized on the sonographs by patterns with patches of strong to weak backscatter caused by a combination of erosional and depositional processes. These environments have diverse grain sizes that range from sandy gravels to muds. Within the harbor, the locations of reworked sediments are uncorrelated with the bottom topography, but, on the shelf, they are found on the lower flanks of bathymetric highs, within broad lows and in relatively deep water (30-50 m). 3. (3) Environments of deposition are depicted on the sonographs as uniform patterns of weak backscatter. These areas contain relatively fine-grained muddy sands and muds. Inside the harbor, depositional environments are found over extensive subtidal flats and within sheltered depressions, whereas, on the shelf, they are restricted to broad lows mainly in deep water. The extreme patchiness of modern sedimentary environments within the Boston Harbor-Massachusetts Bay system reflects the interaction between the irregular bottom topography and both geologic and oceanographic processes. The estuarine part of the system is an effective trap for fine-grained detritus because of its protected nature, low wave climate, and large supply of sediments. The open shelf, however, is largely mantled by winnowed and sorted sediments as a result of erosion during past sea-level fluctuations, sediment resuspension and transport by modern waves and currents, and a spatially variable supply of fine-grained sediments.

Variability of neodymium isotopes associated with planktonic foraminifera in the Pacific Ocean during the Holocene and Last Glacial Maximum

NASA Astrophysics Data System (ADS)

Hu, Rong; Piotrowski, Alexander M.; Bostock, Helen C.; Crowhurst, Simon; Rennie, Victoria

2016-08-01

The deep Pacific Ocean holds the largest oceanic reservoir of carbon which may interchange with the atmosphere on climatologically important timescales. The circulation of the deep Pacific during the Last Glacial Maximum (LGM), however, is not well understood. Neodymium (Nd) isotopes of ferromanganese oxide coatings precipitated on planktonic foraminifera are a valuable proxy for deep ocean water mass reconstruction in paleoceanography. In this study, we present Nd isotope compositions (εNd) of planktonic foraminifera for the Holocene and the LGM obtained from 55 new sites widely distributed in the Pacific Ocean. The Holocene planktonic foraminiferal εNd results agree with the proximal seawater data, indicating that they provide a reliable record of modern bottom water Nd isotopes in the deep Pacific. There is a good correlation between foraminiferal εNd and seawater phosphate concentrations (R2 = 0.80), but poorer correlation with silicate (R2 = 0.37). Our interpretation is that the radiogenic Nd isotope is added to the deep open Pacific through particle release from the upper ocean during deep water mass advection and aging. The data thus also imply the Nd isotopes in the Pacific are not likely to be controlled by silicate cycling. In the North Pacific, the glacial Nd isotopic compositions are similar to the Holocene values, indicating that the Nd isotope composition of North Pacific Deep Water (NPDW) remained constant (-3.5 to -4). During the LGM, the southwest Pacific cores throughout the water column show higher εNd corroborating previous studies which suggested a reduced inflow of North Atlantic Deep Water to the Pacific. However, the western equatorial Pacific deep water does not record a corresponding radiogenic excursion, implying reduced radiogenic boundary inputs during the LGM probably due to a shorter duration of seawater-particle interaction in a stronger glacial deep boundary current. A significant negative glacial εNd excursion is evident in mid-depth (1-2 km) cores of the eastern equatorial Pacific (EEP) which may suggest a stronger influence of NPDW return flow to the core sites and decreased local input in the EEP. Taken together, our Nd records do not support a dynamically slower glacial Pacific overturning circulation, and imply that the increased carbon inventory of Pacific deep water might be due to poor high latitude air-sea exchange and increased biological pump efficiency in glacial times.

Evidence of Enhanced Respired Carbon in Eastern Equatorial Pacific Deep-Waters over the last 30,000 years

NASA Astrophysics Data System (ADS)

Umling, N. E.; Thunell, R.

2016-12-01

Rapid decreases in glacial deep water reservoir ages have been observed in the Eastern Equatorial Pacific (EEP; this study), North Pacific (Rae et al., 2014), Southwest Pacific (Sikes et al., 2016), and North Atlantic (Skinner et al., 2013). It has been hypothesized that release of a deep ocean 14C-depleted, respired-carbon reservoir to the surface ocean and atmosphere is the most likely mechanism for the observed increases in atmospheric CO2 concentrations recorded in ice cores during the last glacial-interglacial transition (Broecker and Barker, 2007). This study examines whether oxygenation, organic carbon flux, and carbonate chemistry in the EEP deep-waters reflect an increase in respired carbon associated with recorded 14C-depletions using isotopic and trace element records from three Panama Basin cores (2,650-3,200 m water-depth). An increase in glacial deep-water respired carbon storage would result in a shift of DIC speciation towards lower carbonate ion concentrations along with deoxygenation of bottom waters. Specifically, we use the boron to calcium (B/Ca) and uranium to calcium (U/Ca) ratios of the benthic foraminifera Cibicidoides wuellerstorfi to reconstruct deep-water carbonate ion concentration (Yu and Elderfield, 2007; Raizsch et al., 2011). Additionally, bottom water oxygenation is estimated from the difference in δ13C of benthic foraminifera living in pore waters at the anoxic boundary and of those living in bottom water (Δ δ13C; Hoogakker et al., 2015, 2016), while carbon flux was assessed from the U/Ca and Cd/Ca of foraminiferal authigenic coatings.

Atmospheric correction of AVIRIS data in ocean waters

NASA Technical Reports Server (NTRS)

Terrie, Gregory; Arnone, Robert

1992-01-01

Hyperspectral data offers unique capabilities for characterizing the ocean environment. The spectral characterization of the composition of ocean waters can be organized into biological and terrigenous components. Biological photosynthetic pigments in ocean waters have unique spectral ocean color signatures which can be associated with different biological species. Additionally, suspended sediment has different scattering coefficients which result in ocean color signatures. Measuring the spatial distributions of these components in the maritime environments provides important tools for understanding and monitoring the ocean environment. These tools have significant applications in pollution, carbon cycle, current and water mass detection, location of fronts and eddies, sewage discharge and fate etc. Ocean color was used from satellite for describing the spatial variability of chlorophyll, water clarity (K(sub 490)), suspended sediment concentration, currents etc. Additionally, with improved atmospheric correction methods, ocean color results produced global products of spectral water leaving radiance (L(sub W)). Ocean color results clearly indicated strong applications for characterizing the spatial and temporal variability of bio-optical oceanography. These studies were largely the results of advanced atmospheric correction techniques applied to multispectral imagery. The atmosphere contributes approximately 80 percent - 90 percent of the satellite received radiance in the blue-green portion of the spectrum. In deep ocean waters, maximum transmission of visible radiance is achieved at 490nm. Conversely, nearly all of the light is absorbed by the water at wavelengths greater than about 650nm and thus appears black. These spectral ocean properties are exploited by algorithms developed for the atmospheric correction used in satellite ocean color processing. The objective was to apply atmospheric correction techniques that were used for procesing satellite Coastal Zone Color Scanner (CZCS) data to AVIRIS data. Quantitative measures of L(sub W) from AVIRIS are compared with ship ground truth data and input into bio-optical models.

Exceptional preservation of eye structure in arthropod visual predators from the Middle Jurassic

PubMed Central

Vannier, Jean; Schoenemann, Brigitte; Gillot, Thomas; Charbonnier, Sylvain; Clarkson, Euan

2016-01-01

Vision has revolutionized the way animals explore their environment and interact with each other and rapidly became a major driving force in animal evolution. However, direct evidence of how ancient animals could perceive their environment is extremely difficult to obtain because internal eye structures are almost never fossilized. Here, we reconstruct with unprecedented resolution the three-dimensional structure of the huge compound eye of a 160-million-year-old thylacocephalan arthropod from the La Voulte exceptional fossil biota in SE France. This arthropod had about 18,000 lenses on each eye, which is a record among extinct and extant arthropods and is surpassed only by modern dragonflies. Combined information about its eyes, internal organs and gut contents obtained by X-ray microtomography lead to the conclusion that this thylacocephalan arthropod was a visual hunter probably adapted to illuminated environments, thus contradicting the hypothesis that La Voulte was a deep-water environment. PMID:26785293

Exceptional preservation of eye structure in arthropod visual predators from the Middle Jurassic.

PubMed

Vannier, Jean; Schoenemann, Brigitte; Gillot, Thomas; Charbonnier, Sylvain; Clarkson, Euan

2016-01-19

Vision has revolutionized the way animals explore their environment and interact with each other and rapidly became a major driving force in animal evolution. However, direct evidence of how ancient animals could perceive their environment is extremely difficult to obtain because internal eye structures are almost never fossilized. Here, we reconstruct with unprecedented resolution the three-dimensional structure of the huge compound eye of a 160-million-year-old thylacocephalan arthropod from the La Voulte exceptional fossil biota in SE France. This arthropod had about 18,000 lenses on each eye, which is a record among extinct and extant arthropods and is surpassed only by modern dragonflies. Combined information about its eyes, internal organs and gut contents obtained by X-ray microtomography lead to the conclusion that this thylacocephalan arthropod was a visual hunter probably adapted to illuminated environments, thus contradicting the hypothesis that La Voulte was a deep-water environment.

Assessing Deep Sea Communities Through Seabed Imagery

NASA Astrophysics Data System (ADS)

Matkin, A. G.; Cross, K.; Milititsky, M.

2016-02-01

The deep sea still remains virtually unexplored. Human activity, such as oil and gas exploration and deep sea mining, is expanding further into the deep sea, increasing the need to survey and map extensive areas of this habitat in order to assess ecosystem health and value. The technology needed to explore this remote environment has been advancing. Seabed imagery can cover extensive areas of the seafloor and investigate areas where sampling with traditional coring methodologies is just not possible (e.g. cold water coral reefs). Remotely operated vehicles (ROVs) are an expensive option, so drop or towed camera systems can provide a more viable and affordable alternative, while still allowing for real-time control. Assessment of seabed imagery in terms of presence, abundance and density of particular species can be conducted by bringing together a variety of analytical tools for a holistic approach. Sixteen deep sea transects located offshore West Africa were investigated with a towed digital video telemetry system (DTS). Both digital stills and video footage were acquired. An extensive data set was obtained from over 13,000 usable photographs, allowing for characterisation of the different habitats present in terms of community composition and abundance. All observed fauna were identified to the lowest taxonomic level and enumerated when possible, with densities derived after the seabed area was calculated for each suitable photograph. This methodology allowed for consistent assessment of the different habitat types present, overcoming constraints, such as specific taxa that cannot be enumerated, such as sponges, corals or bryozoans, the presence of mobile and sessile species, or the level of taxonomic detail. Although this methodology will not enable a full characterisation of a deep sea community, in terms of species composition for instance, itt will allow a robust assessment of large areas of the deep sea in terms of sensitive habitats present and community characteristics of each habitat. Such data can be readily utilised for planning and licensing purposes and be potentially revisited in the future when taxonomic resolution increases, for a more detailed characterisation or monitoring of this poorly described environment.

APL-UW Deep Water Propagation 2015-2017: Philippine Sea Data Analysis

DTIC Science & Technology

2015-09-30

DISTRIBUTION STATEMENT A: Approved for public release: distribution is unlimited APL-UW Deep Water Propagation 2015-2017: Philippine Sea Data...the fundamental statistics of broadband low-frequency acoustical signals evolve during propagation through a dynamically-varying deep ocean. OBJECTIVES...Current models of signal randomization over long ranges in the deep ocean were developed for and tested in the North Pacific Ocean gyre. The

The climatic water balance in an ecological context

NASA Astrophysics Data System (ADS)

Stephenson, N. L.

2011-12-01

Because the climatic water balance describes the seasonal interactions of energy (heat and solar radiation) and water in biologically meaningful ways, it provides a powerful tool for understanding and predicting the effects of climatic changes on the terrestrial biosphere. I begin with a brief overview of the definitions and interpretations of the biologically most important water balance parameters -- actual evapotranspiration (AET) and climatic water deficit (Deficit) -- and how the particular approach used to calculate these parameters depends both on the goals of the study and on the available climatic data. Some authors have attempted to represent aspects of the climatic water balance with indices based on annual potential evapotranspiration (PET) and precipitation (P), such at P/PET or PET - P. However, these and related indices do not reflect soil water dynamics, snow dynamics, or the seasonal interactions of energy and water, and therefore have no biological interpretation. Consequently, such indices are more poorly correlated with ecological patterns and processes than AET and Deficit. Of critical importance, the effects of changing energy and water supplies on the climatic water balance are nearly orthogonal. For example, a plant community growing on shallow soils on a shaded slope and one growing on deep soils on a sunward slope often may have the same amount of measured soil moisture available to them. However, the dynamics of energy and water that resulted in the identical soil moistures were fundamentally different (decreased evaporative demand on the shaded slope versus increased water supply on the deep soils); the associated differences in AET and Deficit will therefore result in different plant communities occupying the sites, in spite of identical soil moistures. In the context of climatic change, the orthogonal effects of energy and water mean that increasing precipitation cannot be expected to counteract the effects of increasing temperature; for example, a warmer, wetter environment will support a fundamentally different biota than the original cooler, drier environment. Thus, a sharp distinction must always be made between the effects of changing energy and water supplies, and the terms "wetter" and "drier" must be carefully defined in terms of AET and Deficit. An understanding of the relationships between the water balance and biotic patterns and processes in space -- particularly within the extreme topographic and edaphic complexity of mountain ranges -- provides a solid foundation for understanding and predicting the ecological effects of climatic changes in time. I will provide concrete examples, particularly from California's Sierra Nevada, with emphasis on cases in which predictions may deviate from intuitive expectations.

Astronaut Sam Gemar, wearing EMU, prepares for training in WETF

NASA Image and Video Library

1987-03-01

S87-26630 (March 1987) --- Astronaut Charles D. (Sam) Gemar, wearing a training version of the Extravehicular Mobility Unit (EMU) space suit, prepares to be emersed in the 25-ft. deep waters of the Weightless Environment Training Facility (WET-F) at the Johnson Space Center (JSC). Once underwater, Gemar was able to achieve a neutrally buoyant state and to simulate the floating type activities of an astronaut in microgravity. Gemar began training as an astronaut candidate in the summer of 1985.

Low Cost, Low Power, Passive Muon Telescope for Interrogating Martian Sub-Surface

NASA Technical Reports Server (NTRS)

Kedar, Sharon; Tanaka, Hirukui; Naudet, Charles; Plaut, Jeffrey J.; Jones, Cathleen E.; Webb, Frank H.

2012-01-01

It has been demonstrated on Earth that a low power, passive muon detector can penetrate deep into geological structures up to several kilometers in size providing high density images of their interiors. Muon tomography is an entirely new class of planetary instrumentation that is ideally suited to address key areas in Mars Science, such as: the search for life and habitable environments, the distribution and state of water and ice and the level of geologic activity on Mars today.

Astronaut Kevin Kregel during training session at WETF

NASA Image and Video Library

1995-02-16

S95-03465 (16 Feb 1995) --- Attired in a training version of the Shuttle launch and entry garment, astronaut Kevin R. Kregel gets help with the final touches of suit donning during a training session at the Johnson Space Center's (JSC) Weightless Environment Training Facility (WET-F). Assigned as pilot for the STS-70 mission, Kregel was about to rehearse emergency bailout. The crew members made use of a nearby 25-feet deep pool to practice parachute landings in water and subsequent deployment of life rafts.

Astronaut Kevin Kregel during bailout training in WETF

NASA Image and Video Library

1995-02-16

S95-03480 (16 FEB 1995) --- Attired in a training version of the Shuttle launch and entry garment, astronaut Kevin R. Kregel, pilot, gets help from SCUBA-equipped divers during a training session at the Johnson Space Center's (JSC) Weightless Environment Training Facility (WET-F). As part of the emergency bailout phase of their training agenda, the STS-70 crew members made use of this 25-feet deep pool to practice parachute landings in water and subsequent deployment of life rafts.

STS-42 crewmembers in LESs prepare for egress exercises in JSC's WETF Bldg 29

NASA Technical Reports Server (NTRS)

1991-01-01

STS-42 Discovery, Orbiter Vehicle (OV) 103, crewmembers, (left to right) Commander Ronald J. Grabe, Payload Specialist Roberta L. Bondar, and Pilot Stephen S. Oswald, participate in launch emergency egress (bailout) exercises in JSC's Weightless Environment Training Facility (WETF) Bldg 29. The crewmembers are outfitted in their launch and entry suits (LESs) and launch and entry helmets (LEHs) as they prepare for the simulated water landing using the WETF's 25 ft deep pool as the ocean.

STS-52 Pilot Baker, in LES/LEH, during JSC WETF bailout exercises

NASA Technical Reports Server (NTRS)

1992-01-01

STS-52 Columbia, Orbiter Vehicle (OV) 102, Pilot Michael A. Baker smiles from under his launch and entry helmet (LEH) and from behind the communications carrier assembly (CCA) microphones as he adjusts his parachute harness. Baker, fully outfitted in a launch and entry suit (LES), prepares for emergency egress (bailout) training exercise in JSC's Weightless Environment Training Facility (WETF) Bldg 29 pool. The WETF's 25-ft deep pool will be used in this simulation of a water landing.

Key Largo Limestone revisited: Pleistocene shelf-edge facies, Florida Keys, USA

USGS Publications Warehouse

Gray, Multer H.; Gischler, E.; Lundberg, J.; Simmons, K.R.; Shinn, E.A.

2002-01-01

New dates and analysis of 12 deep and 57 shallow cores allow a more detailed interpretation of the Pleistocene shelf edge of the Florida Platform as found in various facies of the Key Largo Limestone beneath the Florida Keys. In this study a three-phase evolution of the Quaternary units (Q1-Q5) of the Key Largo is presented with new subdivision of the Q5. (1) In the first phase, the Q1 and Q2 (perhaps deposited during oxygen-isotope stage 11) deep-water quartz-rich environment evolved into a shallow carbonate phase. (2) Subsequently, a Q3 (presumably corresponding to oxygen-isotope stage 9) flourishing reef and productive high-platform sediment phase developed. (3) Finally, a Q4 and Q5 (corresponding to oxygen-isotope stages 7 and 5) stabilization phase occured with reefs and leeward productive lagoons, followed by lower sea levels presenting a sequence of younger (isotope substages 5c, 5a) shelf-margin wedges, sediment veneers and outlier reefs. The Key Largo Limestone provides an accessible model of a carbonate shelf edge with fluctuating water depth, bordering a deep seaward basin for a period of at least 300 ka. During this time, at least four onlaps/offlaps, often separated by periods of karst development with associated diagenetic alterations, took place. The story presented by this limestone not only allows a better understanding of the history of south Florida but also aids in the interpretation of similar persistent shelf-edge sites bordering deep basins in other areas.

Clean access, measurement, and sampling of Ellsworth Subglacial Lake: A method for exploring deep Antarctic subglacial lake environments

NASA Astrophysics Data System (ADS)

Siegert, Martin J.; Clarke, Rachel J.; Mowlem, Matt; Ross, Neil; Hill, Christopher S.; Tait, Andrew; Hodgson, Dominic; Parnell, John; Tranter, Martyn; Pearce, David; Bentley, Michael J.; Cockell, Charles; Tsaloglou, Maria-Nefeli; Smith, Andy; Woodward, John; Brito, Mario P.; Waugh, Ed

2012-01-01

Antarctic subglacial lakes are thought to be extreme habitats for microbial life and may contain important records of ice sheet history and climate change within their lake floor sediments. To find whether or not this is true, and to answer the science questions that would follow, direct measurement and sampling of these environments are required. Ever since the water depth of Vostok Subglacial Lake was shown to be >500 m, attention has been given to how these unique, ancient, and pristine environments may be entered without contamination and adverse disturbance. Several organizations have offered guidelines on the desirable cleanliness and sterility requirements for direct sampling experiments, including the U.S. National Academy of Sciences and the Scientific Committee on Antarctic Research. Here we summarize the scientific protocols and methods being developed for the exploration of Ellsworth Subglacial Lake in West Antarctica, planned for 2012-2013, which we offer as a guide to future subglacial environment research missions. The proposed exploration involves accessing the lake using a hot-water drill and deploying a sampling probe and sediment corer to allow sample collection. We focus here on how this can be undertaken with minimal environmental impact while maximizing scientific return without compromising the environment for future experiments.

Stratal stacking patterns and tectono-sedimentary evolution of hyperextended magma-poor rifted margins

NASA Astrophysics Data System (ADS)

Ribes, C.; Gillard, M.; Epin, M. E.; Ghienne, J. F.; Manatschal, G.; Karner, G. D.; Johnson, C. A.

2016-12-01

Research on the formation and evolution of deep-water rifted margins has undergone a major paradigm shift in recent years. An increasing number of studies of present-day and fossil rifted margins allow us to identify and characterize the structural architecture of the most distal parts of rifted margins, the so-called hyperextended, magma-poor rifted margins. However, at present, little is known about the depositional environments, sedimentary facies, stacking patterns, subsidence and thermal history within these domains. In this context, characterizing the stratal stacking patterns and understanding their spatial and temporal evolution is a new challenge. The major difficulty comes from the fact that the observed stratigraphic geometries and facies relationships are a result of the complex interplay between sediment supply and available accommodation, which is controlled by not only the regional generation of accommodation, but also by local tectono-magmatic processes. These parameters are poorly constrained or even sufficiently known in these tectonic settings. Indeed, the complex structural evolution of hyperextended magma-poor rifted margins, including the development of poly-phase in-sequence and out of sequence extensional detachment faults and associated mantle exhumation and magmatic activity, can generate complex accommodation patterns over a highly structured top basement. The presentation summarizes early results concerning the controlling parameters on ultra-deep water stratigraphic stacking patterns and to provide a conceptual framework. This observation-driven approach combines fieldwork from fossil Alpine Tethys margins exposed in the Alps and the analysis of seismic reflection data from present-day deep water rifted margins such as the Australian-Antarctic, East India and Iberia-Newfoundland margins.

Single Cells within the Puerto Rico Trench Suggest Hadal Adaptation of Microbial Lineages

PubMed Central

León-Zayas, Rosa; Novotny, Mark; Podell, Sheila; Shepard, Charles M.; Berkenpas, Eric; Nikolenko, Sergey; Pevzner, Pavel; Lasken, Roger S.

2015-01-01

Hadal ecosystems are found at a depth of 6,000 m below sea level and below, occupying less than 1% of the total area of the ocean. The microbial communities and metabolic potential in these ecosystems are largely uncharacterized. Here, we present four single amplified genomes (SAGs) obtained from 8,219 m below the sea surface within the hadal ecosystem of the Puerto Rico Trench (PRT). These SAGs are derived from members of deep-sea clades, including the Thaumarchaeota and SAR11 clade, and two are related to previously isolated piezophilic (high-pressure-adapted) microorganisms. In order to identify genes that might play a role in adaptation to deep-sea environments, comparative analyses were performed with genomes from closely related shallow-water microbes. The archaeal SAG possesses genes associated with mixotrophy, including lipoylation and the glycine cleavage pathway. The SAR11 SAG encodes glycolytic enzymes previously reported to be missing from this abundant and cosmopolitan group. The other SAGs, which are related to piezophilic isolates, possess genes that may supplement energy demands through the oxidation of hydrogen or the reduction of nitrous oxide. We found evidence for potential trench-specific gene distributions, as several SAG genes were observed only in a PRT metagenome and not in shallower deep-sea metagenomes. These results illustrate new ecotype features that might perform important roles in the adaptation of microorganisms to life in hadal environments. PMID:26386059

Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea.

PubMed

Takahashi, Masateru; Takahashi, Etsuko; Joudeh, Luay I; Marini, Monica; Das, Gobind; Elshenawy, Mohamed M; Akal, Anastassja; Sakashita, Kosuke; Alam, Intikhab; Tehseen, Muhammad; Sobhy, Mohamed A; Stingl, Ulrich; Merzaban, Jasmeen S; Di Fabrizio, Enzo; Hamdan, Samir M

2018-01-24

The deep-sea brines of the Red Sea are remote and unexplored environments characterized by high temperatures, anoxic water, and elevated concentrations of salt and heavy metals. This environment provides a rare system to study the interplay between halophilic and thermophilic adaptation in biologic macromolecules. The present article reports the first DNA polymerase with halophilic and thermophilic features. Biochemical and structural analysis by Raman and circular dichroism spectroscopy showed that the charge distribution on the protein's surface mediates the structural balance between stability for thermal adaptation and flexibility for counteracting the salt-induced rigid and nonfunctional hydrophobic packing. Salt bridge interactions via increased negative and positive charges contribute to structural stability. Salt tolerance, conversely, is mediated by a dynamic structure that becomes more fixed and functional with increasing salt concentration. We propose that repulsive forces among excess negative charges, in addition to a high percentage of negatively charged random coils, mediate this structural dynamism. This knowledge enabled us to engineer a halophilic version of KOD DNA polymerase.-Takahashi, M., Takahashi, E., Joudeh, L. I., Marini, M., Das, G., Elshenawy, M. M., Akal, A., Sakashita, K., Alam, I., Tehseen, M., Sobhy, M. A., Stingl, U., Merzaban, J. S., Di Fabrizio, E., Hamdan, S. M. Dynamic structure mediates halophilic adaptation of a DNA polymerase from the deep-sea brines of the Red Sea.

Prevalence of the Chloroflexi-Related SAR202 Bacterioplankton Cluster throughout the Mesopelagic Zone and Deep Ocean†

PubMed Central

Morris, R. M.; Rappé, M. S.; Urbach, E.; Connon, S. A.; Giovannoni, S. J.

2004-01-01

Since their initial discovery in samples from the north Atlantic Ocean, 16S rRNA genes related to the environmental gene clone cluster known as SAR202 have been recovered from pelagic freshwater, marine sediment, soil, and deep subsurface terrestrial environments. Together, these clones form a major, monophyletic subgroup of the phylum Chloroflexi. While members of this diverse group are consistently identified in the marine environment, there are currently no cultured representatives, and very little is known about their distribution or abundance in the world's oceans. In this study, published and newly identified SAR202-related 16S rRNA gene sequences were used to further resolve the phylogeny of this cluster and to design taxon-specific oligonucleotide probes for fluorescence in situ hybridization. Direct cell counts from the Bermuda Atlantic time series study site in the north Atlantic Ocean, the Hawaii ocean time series site in the central Pacific Ocean, and along the Newport hydroline in eastern Pacific coastal waters showed that SAR202 cluster cells were most abundant below the deep chlorophyll maximum and that they persisted to 3,600 m in the Atlantic Ocean and to 4,000 m in the Pacific Ocean, the deepest samples used in this study. On average, members of the SAR202 group accounted for 10.2% (±5.7%) of all DNA-containing bacterioplankton between 500 and 4,000 m. PMID:15128540

Pathways of upwelling deep waters to the surface of the Southern Ocean

NASA Astrophysics Data System (ADS)

Tamsitt, Veronica; Drake, Henri; Morrison, Adele; Talley, Lynne; Dufour, Carolina; Gray, Alison; Griffies, Stephen; Mazloff, Matthew; Sarmiento, Jorge; Wang, Jinbo; Weijer, Wilbert

2017-04-01

Upwelling of Atlantic, Indian and Pacific deep waters to the sea surface in the Southern Ocean closes the global overturning circulation and is fundamentally important for oceanic uptake of anthropogenic carbon and heat, nutrient resupply for sustaining oceanic biological production, and the melt rate of ice shelves. Here we go beyond the two-dimensional view of Southern Ocean upwelling, to show detailed Southern Ocean upwelling pathways in three dimensions, using hydrographic observations and particle tracking in high-resolution ocean and climate models. The northern deep waters enter the Antarctic Circumpolar Current (ACC) via narrow southward currents along the boundaries of the three ocean basins, before spiraling southeastward and upward through the ACC. Upwelling is greatly enhanced at five major topographic features, associated with vigorous mesoscale eddy activity. Deep water reaches the upper ocean predominantly south of the southern ACC boundary, with a spatially nonuniform distribution, regionalizing warm water supply to Antarctic ice shelves and the delivery of nutrient and carbon-rich water to the sea surface. The timescale for half of the deep water to upwell from 30°S to the mixed layer is on the order of 60-90 years, which has important implications for the timescale for signals to propagate through the deep ocean. In addition, we quantify the diabatic transformation along particle trajectories, to identify where diabatic processes are important along the upwelling pathways.

Depositional model and seismic expression of turbidites in Campos basin, offshore Brazil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guardado, L.R.; Peres, W.E.; Souza Cruz, C.E.

1986-05-01

The Campos basin, located at the southeastern coast of Brazil, is one of the most prolific hydrocarbon areas along the Brazilian margin. The producing reservoirs range from the Neocomian to the early Miocene and were deposited in various environments. However, on deep-water submarine fans (turbidites), these reservoirs reach their maximum expression. The ratio between subsidence and sediment influx, associated to halokinesis, generated two major depositional styles for the sections before and after the early Oligocene, which affect the geometry of the turbidite bodies. Albian, Campanian, and Eocene turbidites occur mainly under the present continental shelf and are confined to thatmore » area. However, the Oligocene-Miocene turbidites occur mainly under the present slope. These younger turbidites were deposited as large submarine fans in broad subbasins as blankets, at the base of deep-water prograding sequences, and they have the potential for large hydrocarbon accumulations. These submarine fans are well defined on the seismic data, and specific processing improves the definition of anomalous amplitudes related to the presence of oil in the reservoirs.« less

KSC-2013-3344

NASA Image and Video Library

2013-08-15

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, members of the news media observe the stationary recovery test being conducted on the Orion boilerplate test article in the water near a U.S. Navy ship. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

Eukaryotic microbes, principally fungi and labyrinthulomycetes, dominate biomass on bathypelagic marine snow

PubMed Central

Bochdansky, Alexander B; Clouse, Melissa A; Herndl, Gerhard J

2017-01-01

In the bathypelagic realm of the ocean, the role of marine snow as a carbon and energy source for the deep-sea biota and as a potential hotspot of microbial diversity and activity has not received adequate attention. Here, we collected bathypelagic marine snow by gentle gravity filtration of sea water onto 30 μm filters from ~1000 to 3900 m to investigate the relative distribution of eukaryotic microbes. Compared with sediment traps that select for fast-sinking particles, this method collects particles unbiased by settling velocity. While prokaryotes numerically exceeded eukaryotes on marine snow, eukaryotic microbes belonging to two very distant branches of the eukaryote tree, the fungi and the labyrinthulomycetes, dominated overall biomass. Being tolerant to cold temperature and high hydrostatic pressure, these saprotrophic organisms have the potential to significantly contribute to the degradation of organic matter in the deep sea. Our results demonstrate that the community composition on bathypelagic marine snow differs greatly from that in the ambient water leading to wide ecological niche separation between the two environments. PMID:27648811

KSC-2013-3330

NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, the Orion boilerplate test article floats in the water near a U.S. Navy ship during a stationary recovery test. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

KSC-2013-3322

NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, the Orion boilerplate test article floats in the water near a U.S. Navy ship during a stationary recovery test. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

KSC-2013-3325

NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, U.S. Navy personnel detach tether lines from the Orion boilerplate test article during a stationary recovery test in the water. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

KSC-2013-3335

NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, the Orion boilerplate test article is being returned to a U.S. Navy ship following a stationary recovery test in the water. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

KSC-2013-3327

NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, the Orion boilerplate test article floats in the water near a U.S. Navy ship during a stationary recovery test. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

KSC-2013-3326

NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, U.S. Navy personnel detach tether lines from the Orion boilerplate test article during a stationary recovery test in the water. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

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NASA Image and Video Library

2013-08-15

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, NASA and the U.S. Navy are conducting a stationary recovery test on the Orion boilerplate test article in the water near a U.S. Navy ship. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

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NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, NASA and U.S. Navy personnel monitor the progress as the Orion boilerplate test article floats in the water during a stationary recovery test. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

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NASA Image and Video Library

2013-08-13

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, the Orion boilerplate test article has been moved from a U.S. Navy ship and placed in the water for a stationary recovery test. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis

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NASA Image and Video Library

2013-08-15

HAMPTON, Va. – At the Naval Station Norfolk near NASA’s Langley Research Center in Virginia, members of the news media observe the stationary recovery test being conducted on the Orion boilerplate test article in the water near a U.S. Navy ship. NASA and the U.S. Navy are conducting tests to prepare for recovery of the Orion crew module and forward bay cover on its return from a deep space mission. The stationary recovery test will allow the teams to demonstrate and evaluate the recovery processes, procedures, hardware and personnel in a controlled environment before conducting a second recovery test next year in open waters. Orion is the exploration spacecraft designed to carry astronauts to destinations not yet explored by humans, including an asteroid and Mars. It will have emergency abort capability, sustain the crew during space travel and provide safe re-entry from deep space return velocities. The first unpiloted test flight of the Orion is scheduled to launch in 2014 atop a Delta IV rocket and in 2017 on NASA’s Space Launch System rocket. For more information, visit http://www.nasa.gov/orion. Photo credit: NASA/Dimitri Gerondidakis