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Sample records for deep-sea seamount fisheries

  1. Fisheries: deep-sea fishes qualify as endangered.

    PubMed

    Devine, Jennifer A; Baker, Krista D; Haedrich, Richard L

    2006-01-05

    Criteria from the World Conservation Union (IUCN) have been used to classify marine fish species as endangered since 1996, but deep-sea fish have not so far been evaluated--despite their vulnerability to aggressive deepwater fishing as a result of certain life-history traits. Here we use research-survey data to show that five species of deep-sea fish have declined over a 17-year period in the Canadian waters of the northwest Atlantic to such an extent that they meet the IUCN criteria for being critically endangered. Our results indicate that urgent action is needed for the sustainable management of deep-sea fisheries.

  2. 75 FR 49420 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-13

    ... United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic Deep-Sea Red Crab Specifications In... (TAC) and corresponding fleet days-at-sea (DAS) allocation for the Atlantic deep- sea red crab fishery... the implementing regulations for the Atlantic Deep- Sea Red Crab Fishery Management Plan...

  3. Prokaryote diversity and viral production in deep-sea sediments and seamounts

    NASA Astrophysics Data System (ADS)

    Danovaro, Roberto; Corinaldesi, Cinzia; Luna, Gian Marco; Magagnini, Mirko; Manini, Elena; Pusceddu, Antonio

    2009-05-01

    Despite the fact that marine prokaryotes and viruses have been increasingly investigated over the last decade, knowledge on prokaryote diversity and viral production in bathyal sediments is limited. We investigated microbial variables in the deep-sea sediments around two seamounts at 3000-m depth in the Tyrrhenian Sea and sediments located at the same depth, but not affected by the presence of the seamounts. We hypothesized that seamounts altered significantly prokaryotes-viruses interactions in surrounding deep-sea sediments. Sediments surrounding seamounts were characterised by prokaryotic abundances significantly higher than those observed in non-seamount sediments. Benthic viral production was about double in sediments close to seamounts than in non-seamount sediments, where virus turnover was up to 3 times lower. Total Bacteria, as assessed by CARD-FISH, dominated prokaryotic community structure, whereas Archaea accounted on average for approximately 10%. The fraction of Crenarchaeota was always higher than Euryarchaeota. Bacterial diversity, estimated using ARISA, was high, with up to 127 different microbial operational taxonomic units (OTUs) in a single sample. Archaeal richness (determined using T-RFLP of the 16S rRNA gene) ranged from 12 to 20 OTUs, while Archaeal evenness was comprised between 0.529±0.018 and 0.623±0.08. Results represent a pointer for future investigations dealing with the interactions between viruses and prokaryotes in deep-sea sediments.

  4. Deep-sea fish distribution varies between seamounts: results from a seamount complex off New Zealand.

    PubMed

    Tracey, Dianne M; Clark, Malcolm R; Anderson, Owen F; Kim, Susan W

    2012-01-01

    Fish species data from a complex of seamounts off New Zealand termed the "Graveyard Seamount Complex' were analysed to investigate whether fish species composition varied between seamounts. Five seamount features were included in the study, with summit depths ranging from 748-891 m and elevation from 189-352 m. Measures of fish species dominance, rarity, richness, diversity, and similarity were examined. A number of factors were explored to explain variation in species composition, including latitude, water temperature, summit depth, depth at base, elevation, area, slope, and fishing effort. Depth at base and slope relationships were significant with shallow seamounts having high total species richness, and seamounts with a more gradual slope had high mean species richness. Species similarity was modelled and showed that the explanatory variables were driven primarily by summit depth, as well as by the intensity of fishing effort and elevation. The study showed that fish assemblages on seamounts can vary over very small spatial scales, in the order of several km. However, patterns of species similarity and abundance were inconsistent across the seamounts examined, and these results add to a growing literature suggesting that faunal communities on seamounts may be populated from a broad regional species pool, yet show considerable variation on individual seamounts.

  5. Microbial Ecology of Subseafloor Communities at Deep-sea Hydrothermal Seamounts of the Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Huber, J. A.; Bolton, S.; Butterfield, D. A.; Baross, J. A.; Sogin, M. L.

    2006-12-01

    Circulation of hydrothermal fluids and seawater occurs within the upper 500 m of porous oceanic crust and provides a rich environment for microbial growth in the subseafloor. Enrichment cultures, geochemical indicators, and sequence analyses of PCR amplicons of ribosomal RNA genes demonstrate that these crustal fluids host a microbial community composed of organisms indigenous to the subseafloor and organisms from other deep-sea habitats, such as seawater. However, the subseafloor microbial communities remain undersampled and our knowledge of what microbes are present and how they are distributed in this dynamic environment over time and space is fragmentary. This work focuses on determining the microbial diversity and genomic content of the subseafloor microbial community at geographically and geochemically distinct deep- sea hydrothermal seamounts. The approach uses a combination of methods, including DNA-based, culturing, and geochemical methods applied to diffuse fluids from two locations: Axial Seamount on the Juan de Fuca Ridge in the northeast Pacific Ocean (45.92° N, 130° W) and seamounts along the Mariana Arc (14-22° N, 143-146° E) in the western Pacific. Both locations host recently eruptive seamounts located above 2000 m with diffusely venting fluids that contain high concentrations of carbon dioxide. However, their geological and chemical setting differs greatly; Axial is a mid-ocean ridge seamount with fluids dominated by high concentrations of hydrogen sulfide, and the Mariana seamounts are at a convergent plate boundary and host a variety of fluids, including those with very low pH and high concentrations of particulate sulfur. Initial studies reveal bacterial communities at both sites consist mainly of epsilon-proteobacteria, a physiologically and phylogenetically diverse group known to have a widespread distribution and dominance in many deep-sea vent habitats. However, while subseafloor archaeal communities at Axial are composed of autotrophic

  6. Mapping and Collection of Deep-Sea Corals from Seamounts in the NW Atlantic

    NASA Astrophysics Data System (ADS)

    Scheirer, D.; Adkins, J.; Yoerger, D.; Shank, T.

    2003-12-01

    We mapped the occurrence of living and fossil deep-sea corals using R/V Atlantis, DSV Alvin, the autonomous vehicle ABE, and a towed camera system, and we collected these corals and their associated fauna at sites on the New England and Muir seamount chains in the northwest Atlantic. On cruise AT7-35 (May-June 2003; the Medusa Expedition), we used a nested mapping approach to span observational scales from tens of kilometers with shipboard multibeam sonar to centimeters with human and camera observations. With these observations, we characterized the volcanic structure of the seamount edifices, their modification by mass-wasting, their primary volcanic surface features, and the deposition of sediments and metal-rich encrustations. These seamount properties, in turn, define the physical habitat important for recruitment and sustenance of faunal communities, and they influence oceanographic factors such as current concentration and stagnation, localized upwelling, and vertical mixing. Manning and Gosnold seamounts, on the New England chain, rise as much as 4 km above the surrounding abyssal plain; they are distinct edifices that merge with adjacent cones near their lower reaches. The largest edifices in the study area have undergone sector collapse, leaving up-slope hanging walls and amphitheaters above landslide run-outs. Visual images of these landslide slopes show sedimented talus with isolated blocks. The Muir seamount chain is composed of a handful of major edifices that merge to form a ridge >100 km in length. Sector collapse away from the axis of the ridge has sharpened the ridge and left occasional buttressing ridges perpendicular to the main ridge. Away from the landslides, the seamount tops are generally flat, and the seamount flanks are characterized by down-slope ridges and volcanic knobs. Much of the flat seafloor is completely sedimented; bottom currents have variable intensity and direction based on observed sedimentary structures and submersible

  7. Meiofauna assemblages of the Condor Seamount (North-East Atlantic Ocean) and adjacent deep-sea sediments

    NASA Astrophysics Data System (ADS)

    Zeppilli, Daniela; Bongiorni, Lucia; Cattaneo, Antonio; Danovaro, Roberto; Santos, Ricardo Serrão

    2013-12-01

    Seamounts are currently considered hotspots of biodiversity and biomass for macro- and megabenthic taxa, but knowledge of meiofauna is still limited. Studies have revealed the existence of highly diverse meiofauna assemblages; however most data are mainly qualitative or focused only on specific groups, thus preventing comparisons among seamounts and with other deep-sea areas. This study, conducted on Condor Seamount (Azores, North-East Atlantic Ocean), describes variation in abundance, biomass, community structure and biodiversity of benthic meiofauna from five sites located on the Condor Seamount: and one site away from the seamount. While the summit of the seamount hosted the highest alpha biodiversity, the flanks and the bases showed a rich meiofauna assemblage in terms of abundance and biomass. The observed marked differences in grain size composition of sediments reflected the oceanographic conditions impacting different sectors of the Condor seamount, and could play an important role in the spatial distribution of different meiofaunal taxa. Trophic conditions (biochemical composition of organic matter) explained 78% of the variability in the meiofauna biomass pattern while sediment grain influenced the vertical distribution of meiofauna and only partially explained meiofaunal taxa composition. This study provides a further advancement in the knowledge of meiofaunal communities of seamounts. Only a deeper understanding of the whole benthic communities (including meiofauna) will allow to elaborate effective management and conservation tools for seamount ecosystems.

  8. 76 FR 36511 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab; Amendment 3

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-22

    ... United States; Atlantic Deep-Sea Red Crab; Amendment 3 AGENCY: National Marine Fisheries Service (NMFS... Fishery Management Council (Council) has submitted Amendment 3 to the Atlantic Deep-Sea Red Crab Fishery... proposed to modify the existing trap limit regulations. The current trap limit regulations state that...

  9. 75 FR 17070 - Fisheries in the Western Pacific; Hawaii Bottomfish and Seamount Groundfish Fisheries; Fishery...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-05

    ... National Oceanic and Atmospheric Administration 50 CFR Part 665 RIN 0648-XU60 Fisheries in the Western Pacific; Hawaii Bottomfish and Seamount Groundfish Fisheries; Fishery Closure AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration (NOAA), Commerce. ]...

  10. Fisheries Aspects of Seamounts and Taylor Columns

    DTIC Science & Technology

    1986-09-01

    interaction with ocean currents. These recent biological studies have suggested that seamounts may support highly productive ecosystems (Borets, 1975...unique, highly productive ecosystem capable of, if managed properly, maintaining a renewable, commercially feasible resource. Of the seamounts with...the armorhead population. Due to a probable combination of overfishing and poor recruitment, the large fishery of the early 1970’s began a rapid

  11. 75 FR 7435 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-19

    ... Atlantic deep-sea red crab fishery, including a target total allowable catch (TAC) and a fleet-wide days-at... opportunity for public comment. The intent of this rulemaking is to specify the target TAC and other... New England Fishery Management Council (Council) to recommend, on a triennial basis, a target TAC...

  12. 76 FR 10524 - Hawaii Bottomfish and Seamount Groundfish Fisheries; Fishery Closure

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-02-25

    ... Seamount Groundfish Fisheries; Fishery Closure AGENCY: National Marine Fisheries Service (NMFS), National... closing the commercial and non-commercial fisheries in the main Hawaiian Islands ] fishery for seven... INFORMATION CONTACT: Jarad Makaiau, Sustainable Fisheries Division, NMFS Pacific Islands Region,...

  13. Major and minor element geochemistry of deep-sea sediments in the Azores Platform and southern seamount region.

    PubMed

    Palma, Carla; Oliveira, Anabela; Valença, Manuela; Cascalho, João; Pereira, Eduarda; Lillebø, Ana I; Duarte, Armando C; Pinto de Abreu, Manuel

    2013-10-15

    The Azores Platform and the Irving and Great Meteor seamounts south of the archipelago (38°N-29°N) have rarely been studied geochemically, a fact which is surprising given that they represent the south-eastern limit of region V outlined in the Convention for the Protection of the Marine Environment of the North-East Atlantic (OSPAR Convention). The main aim of the present work was therefore to characterise the spatial variability of major and minor elements in deep-sea sediment cores from these two regions. XRD and geochemical analyses revealed that whereas the Azores Platform sediments are composed of a mixture of biogenic and detrital volcanic material, those at the seamounts are characterised by carbonated biogenic remains. The latter sediments were found to contain very low amounts of volcanic or hydrothermal detrital material, being almost entirely comprised of CaCO3 (more than 80%).

  14. Characteristics of microbial communities in crustal fluids in a deep-sea hydrothermal field of the suiyo seamount.

    PubMed

    Kato, Shingo; Nakawake, Michiyuki; Kita, Junko; Yamanaka, Toshiro; Utsumi, Motoo; Okamura, Kei; Ishibashi, Jun-Ichiro; Ohkuma, Moriya; Yamagishi, Akihiko

    2013-01-01

    To directly access the sub-seafloor microbial communities, seafloor drilling has been done in a deep-sea hydrothermal field of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific. In the present study, crustal fluids were collected from the boreholes, and the bacterial and archaeal communities in the fluids were investigated by culture-independent molecular analysis based on 16S rRNA gene sequences. Bottom seawater, sands, rocks, sulfide mound, and chimneys were also collected around the boreholes and analyzed for comparisons. Comprehensive analysis revealed the characteristics of the microbial community composition in the crustal fluids. Phylotypes closely related to cultured species, e.g., Alteromonas, Halomonas, Marinobacter, were relatively abundant in some crustal fluid samples, whereas the phylotypes related to Pelagibacter and the SUP05-group were relatively abundant in the seawater samples. Phylotypes related to other uncultured environmental clones in Alphaproteobacteria and Gammaproteobacteria were relatively abundant in the sand, rock, sulfide mound, and chimney samples. Furthermore, comparative analysis with previous studies of the Suiyo Seamount crustal fluids indicates the change in the microbial community composition for 3 years. Our results provide novel insights into the characteristics of the microbial communities in crustal fluids beneath a deep-sea hydrothermal field.

  15. Exploring Genomic Diversity Using Metagenomics of Deep-Sea Subsurface Microbes from the Louisville Seamount and the South Pacific Gyre

    NASA Astrophysics Data System (ADS)

    Tully, B. J.; Sylvan, J. B.; Heidelberg, J. F.; Huber, J. A.

    2014-12-01

    There are many limitations involved with sampling microbial diversity from deep-sea subsurface environments, ranging from physical sample collection, low microbial biomass, culturing at in situ conditions, and inefficient nucleic acid extractions. As such, we are continually modifying our methods to obtain better results and expanding what we know about microbes in these environments. Here we present analysis of metagenomes sequences from samples collected from 120 m within the Louisville Seamount and from the top 5-10cm of the sediment in the center of the south Pacific gyre (SPG). Both systems are low biomass with ~102 and ~104 cells per cm3 for Louisville Seamount samples analyzed and the SPG sediment, respectively. The Louisville Seamount represents the first in situ subseafloor basalt and the SPG sediments represent the first in situ low biomass sediment microbial metagenomes. Both of these environments, subseafloor basalt and sediments underlying oligotrophic ocean gyres, represent large provinces of the seafloor environment that remain understudied. Despite the low biomass and DNA generated from these samples, we have generated 16 near complete genomes (5 from Louisville and 11 from the SPG) from the two metagenomic datasets. These genomes are estimated to be between 51-100% complete and span a range of phylogenetic groups, including the Proteobacteria, Actinobacteria, Firmicutes, Chloroflexi, and unclassified bacterial groups. With these genomes, we have assessed potential functional capabilities of these organisms and performed a comparative analysis between the environmental genomes and previously sequenced relatives to determine possible adaptations that may elucidate survival mechanisms for these low energy environments. These methods illustrate a baseline analysis that can be applied to future metagenomic deep-sea subsurface datasets and will help to further our understanding of microbiology within these environments.

  16. 75 FR 69015 - Fisheries in the Western Pacific; Hawaii Bottomfish and Seamount Groundfish; Measures To Rebuild...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-11-10

    ... Pacific; Hawaii Bottomfish and Seamount Groundfish; Measures To Rebuild Overfished Armorhead at Hancock Seamounts AGENCY: National Marine Fisheries Service (NMFS), National Oceanic and Atmospheric Administration... seamount groundfish at the Hancock Seamounts until the overfished U.S. stock of pelagic...

  17. Characterization of bacterial communities associated with deep-sea corals on Gulf of Alaska seamounts.

    PubMed

    Penn, Kevin; Wu, Dongying; Eisen, Jonathan A; Ward, Naomi

    2006-02-01

    Although microbes associated with shallow-water corals have been reported, deepwater coral microbes are poorly characterized. A cultivation-independent analysis of Alaskan seamount octocoral microflora showed that Proteobacteria (classes Alphaproteobacteria and Gammaproteobacteria), Firmicutes, Bacteroidetes, and Acidobacteria dominate and vary in abundance. More sampling is needed to understand the basis and significance of this variation.

  18. Comparing Molecular Variation to Morphological Species Designations in the Deep-Sea Coral Narella Reveals New Insights into Seamount Coral Ranges

    PubMed Central

    Baco, Amy R.; Cairns, Stephen D.

    2012-01-01

    Recent studies have countered the paradigm of seamount isolation, confounding conservation efforts at a critical time. Efforts to study deep-sea corals, one of the dominant taxa on seamounts, to understand seamount connectivity, are hampered by a lack of taxonomic keys. A prerequisite for connectivity is species overlap. Attempts to better understand species overlap using DNA barcoding methods suggest coral species are widely distributed on seamounts and nearby features. However, no baseline has been established for variation in these genetic markers relative to morphological species designations for deep-sea octocoral families. Here we assess levels of genetic variation in potential octocoral mitochondrial barcode markers relative to thoroughly examined morphological species in the genus Narella. The combination of six markers used here, approximately 3350 bp of the mitochondrial genome, resolved 83% of the morphological species. Our results show that two of the markers, ND2 and NCR1, are not sufficient to resolve genera within Primnoidae, let alone species. Re-evaluation of previous studies of seamount octocorals based on these results suggest that those studies were looking at distributions at a level higher than species, possibly even genus or subfamily. Results for Narella show that using more markers provides haplotypes with relatively narrow depth ranges on the seamounts studied. Given the lack of 100% resolution of species with such a large portion of the mitochondrial genome, we argue that previous genetic studies have not resolved the degree of species overlap on seamounts and that we may not have the power to even test the hypothesis of seamount isolation using mitochondrial markers, let alone refute it. Thus a precautionary approach is advocated in seamount conservation and management, and the potential for depth structuring should be considered. PMID:23029093

  19. Comparing molecular variation to morphological species designations in the deep-sea coral Narella reveals new insights into seamount coral ranges.

    PubMed

    Baco, Amy R; Cairns, Stephen D

    2012-01-01

    Recent studies have countered the paradigm of seamount isolation, confounding conservation efforts at a critical time. Efforts to study deep-sea corals, one of the dominant taxa on seamounts, to understand seamount connectivity, are hampered by a lack of taxonomic keys. A prerequisite for connectivity is species overlap. Attempts to better understand species overlap using DNA barcoding methods suggest coral species are widely distributed on seamounts and nearby features. However, no baseline has been established for variation in these genetic markers relative to morphological species designations for deep-sea octocoral families. Here we assess levels of genetic variation in potential octocoral mitochondrial barcode markers relative to thoroughly examined morphological species in the genus Narella. The combination of six markers used here, approximately 3350 bp of the mitochondrial genome, resolved 83% of the morphological species. Our results show that two of the markers, ND2 and NCR1, are not sufficient to resolve genera within Primnoidae, let alone species. Re-evaluation of previous studies of seamount octocorals based on these results suggest that those studies were looking at distributions at a level higher than species, possibly even genus or subfamily. Results for Narella show that using more markers provides haplotypes with relatively narrow depth ranges on the seamounts studied. Given the lack of 100% resolution of species with such a large portion of the mitochondrial genome, we argue that previous genetic studies have not resolved the degree of species overlap on seamounts and that we may not have the power to even test the hypothesis of seamount isolation using mitochondrial markers, let alone refute it. Thus a precautionary approach is advocated in seamount conservation and management, and the potential for depth structuring should be considered.

  20. The economic implications of changing regulations for deep sea fishing under the European Common Fisheries Policy: UK case study.

    PubMed

    Mangi, Stephen C; Kenny, Andrew; Readdy, Lisa; Posen, Paulette; Ribeiro-Santos, Ana; Neat, Francis C; Burns, Finlay

    2016-08-15

    Economic impact assessment methodology was applied to UK fisheries data to better understand the implications of European Commission proposal for regulations to fishing for deep-sea stocks in the North-East Atlantic (EC COM 371 Final 2012) under the Common Fisheries Policy (CFP). The aim was to inform the on-going debate to develop the EC proposal, and to assist the UK fishing industry and Government in evaluating the most effective options to manage deep sea fish stocks. Results indicate that enforcing the EC proposal as originally drafted results in a number of implications for the UK fleet. Because of the proposed changes to the list of species defined as being deep sea species, and a new definition of what constitutes a vessel targeting deep sea species, a total of 695 active UK fishing vessels would need a permit to fish for deep sea species. However, due to existing and capped capacity limits many vessels would potentially not be able to obtain such a permit. The economic impact of these changes from the status quo reveals that in the short term, landings would decrease by 6540 tonnes, reducing gross value added by £3.3 million. Alternative options were also assessed that provide mitigation measures to offset the impacts of the proposed regulations whilst at the same time providing more effective protection of deep sea Vulnerable Marine Ecosystems (VMEs). The options include setting a 400m depth rule that identifies a depth beyond which vessels would potentially be classified as fishing for deep sea species and designating 'core areas' for deep sea fishing at depths>400m to minimise the risk of further impacts of bottom fishing gear on deep sea habitats. Applying a 400m depth limit and 'core fishing' area approach deeper than 400m, the impact of the EC proposal would essentially be reduced to zero, that is, on average no vessels (using the status quo capacity baseline) would be impacted by the proposal.

  1. Archaeal and bacterial communities in deep-sea hydrogenetic ferromanganese crusts on old seamounts of the northwestern Pacific.

    PubMed

    Nitahara, Shota; Kato, Shingo; Usui, Akira; Urabe, Tetsuro; Suzuki, Katsuhiko; Yamagishi, Akihiko

    2017-01-01

    Deep-sea ferromanganese crusts are found ubiquitously on the surface of seamounts of the world's oceans. Considering the wide distribution of the crusts, archaeal and bacterial communities on these crusts potentially play a significant role in biogeochemical cycling between oceans and seamounts; however little is known about phylogenetic diversity, abundance and function of the crust communities. To this end, we collected the crusts from the northwest Pacific basin and the Philippine Sea. We performed comprehensive analysis of the archaeal and bacterial communities of the collected crust samples by culture-independent molecular techniques. The distance between the sampling points was up to approximately 2,000 km. Surrounding sediments and bottom seawater were also collected as references near the sampling points of the crusts, and analyzed together. 16S rRNA gene analyses showed that the community structure of the crusts was significantly different from that of the seawater. Several members related to ammonia-oxidizers of Thaumarchaeota and Betaproteobacteria were detected in the crusts at most of all regions and depths by analyses of 16S rRNA and amoA genes, suggesting that the ammonia-oxidizing members are commonly present in the crusts. Although members related to the ammonia-oxidizers were also detected in the seawater, they differed from those in the crusts phylogenetically. In addition, members of uncultured groups of Alpha-, Delta- and Gammaproteobacteria were commonly detected in the crusts but not in the seawater. Comparison with previous studies of ferromanganese crusts and nodules suggests that the common members determined in the present study are widely distributed in the crusts and nodules on the vast seafloor. They may be key microbes for sustaining microbial ecosystems there.

  2. Archaeal and bacterial communities in deep-sea hydrogenetic ferromanganese crusts on old seamounts of the northwestern Pacific

    PubMed Central

    Usui, Akira; Urabe, Tetsuro; Suzuki, Katsuhiko; Yamagishi, Akihiko

    2017-01-01

    Deep-sea ferromanganese crusts are found ubiquitously on the surface of seamounts of the world’s oceans. Considering the wide distribution of the crusts, archaeal and bacterial communities on these crusts potentially play a significant role in biogeochemical cycling between oceans and seamounts; however little is known about phylogenetic diversity, abundance and function of the crust communities. To this end, we collected the crusts from the northwest Pacific basin and the Philippine Sea. We performed comprehensive analysis of the archaeal and bacterial communities of the collected crust samples by culture-independent molecular techniques. The distance between the sampling points was up to approximately 2,000 km. Surrounding sediments and bottom seawater were also collected as references near the sampling points of the crusts, and analyzed together. 16S rRNA gene analyses showed that the community structure of the crusts was significantly different from that of the seawater. Several members related to ammonia-oxidizers of Thaumarchaeota and Betaproteobacteria were detected in the crusts at most of all regions and depths by analyses of 16S rRNA and amoA genes, suggesting that the ammonia-oxidizing members are commonly present in the crusts. Although members related to the ammonia-oxidizers were also detected in the seawater, they differed from those in the crusts phylogenetically. In addition, members of uncultured groups of Alpha-, Delta- and Gammaproteobacteria were commonly detected in the crusts but not in the seawater. Comparison with previous studies of ferromanganese crusts and nodules suggests that the common members determined in the present study are widely distributed in the crusts and nodules on the vast seafloor. They may be key microbes for sustaining microbial ecosystems there. PMID:28235095

  3. 76 FR 15222 - Hawaii Bottomfish and Seamount Groundfish Fisheries; Modification of Fishery Closures

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-03-21

    ... Seamount Groundfish Fisheries; Modification of Fishery Closures AGENCY: National Marine Fisheries Service... Islands (MHI) Deep-7 bottomfish fishery from 14 to 7 days. The intent of the change is to enhance administration of the fishery. DATES: This final rule is effective April 20, 2011. ADDRESSES: Copies of...

  4. A comparison of genetic connectivity in two deep sea corals to examine whether seamounts are isolated islands or stepping stones for dispersal

    PubMed Central

    Miller, Karen J.; Gunasekera, Rasanthi M.

    2017-01-01

    Ecological processes in the deep sea are poorly understood due to the logistical constraints of sampling thousands of metres below the ocean’s surface and remote from most land masses. Under such circumstances, genetic data provides unparalleled insight into biological and ecological relationships. We use microsatellite DNA to compare the population structure, reproductive mode and dispersal capacity in two deep sea corals from seamounts in the Southern Ocean. The solitary coral Desmophyllum dianthus has widespread dispersal consistent with its global distribution and resilience to disturbance. In contrast, for the matrix-forming colonial coral Solenosmilia variabilis asexual reproduction is important and the dispersal of sexually produced larvae is negligible, resulting in isolated populations. Interestingly, despite the recognised impacts of fishing on seamount communities, genetic diversity on fished and unfished seamounts was similar for both species, suggesting that evolutionary resilience remains despite reductions in biomass. Our results provide empirical evidence that a group of seamounts can function either as isolated islands or stepping stones for dispersal for different taxa. Furthermore different strategies will be required to protect the two sympatric corals and consequently the recently declared marine reserves in this region may function as a network for D. dianthus, but not for S. variabilis. PMID:28393887

  5. A comparison of genetic connectivity in two deep sea corals to examine whether seamounts are isolated islands or stepping stones for dispersal.

    PubMed

    Miller, Karen J; Gunasekera, Rasanthi M

    2017-04-10

    Ecological processes in the deep sea are poorly understood due to the logistical constraints of sampling thousands of metres below the ocean's surface and remote from most land masses. Under such circumstances, genetic data provides unparalleled insight into biological and ecological relationships. We use microsatellite DNA to compare the population structure, reproductive mode and dispersal capacity in two deep sea corals from seamounts in the Southern Ocean. The solitary coral Desmophyllum dianthus has widespread dispersal consistent with its global distribution and resilience to disturbance. In contrast, for the matrix-forming colonial coral Solenosmilia variabilis asexual reproduction is important and the dispersal of sexually produced larvae is negligible, resulting in isolated populations. Interestingly, despite the recognised impacts of fishing on seamount communities, genetic diversity on fished and unfished seamounts was similar for both species, suggesting that evolutionary resilience remains despite reductions in biomass. Our results provide empirical evidence that a group of seamounts can function either as isolated islands or stepping stones for dispersal for different taxa. Furthermore different strategies will be required to protect the two sympatric corals and consequently the recently declared marine reserves in this region may function as a network for D. dianthus, but not for S. variabilis.

  6. Novosphingobium profundi sp. nov. isolated from a deep-sea seamount.

    PubMed

    Zhang, De-Chao; Liu, Yan-Xia; Huang, Hai-Jun

    2017-01-01

    A marine bacterial strain, F72(T), was isolated from a solitary scleractinian coral, collected in Yap seamounts in the Pacific Ocean. Strain F72(T) is a Gram-negative, light-yellow-pigmented, motile, rod-shaped bacterium. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain F72(T) is related to the genus Novosphingobium and has high 16S rRNA gene sequence similarities with the type strains of Novosphingobium pentaromativorans US6-1(T) (97.7 %), Novosphingobium panipatense SM16(T) (97.6 %), Novosphingobium mathurense SM117(T) (97.2 %) and Novosphingobium barchaimii LL02(T) (97.1 %). Ubiquinone Q-10 was detected as the dominant quinone. The predominant cellular fatty acids were C18:1ω7c and C17:1ω6c. The genomic DNA G+C content of strain F72(T) was 63.4 mol %. The polar lipids profile contained phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylcholine, sphingoglycolipid and one uncharacterized lipid. Strain F72(T) shared DNA relatedness of 25 % with N. pentaromativorans JCM 12182(T), 31 % with N. panipatense DSM 22890(T), 21 % with N. mathurense DSM 23374(T) and 26 % with N. barchaimii DSM 25411(T). Combined data from phenotypic, phylogenetic and DNA-DNA relatedness studies demonstrated that the strain F72(T) is a representative of a novel species of the genus Novosphingobium, for which we propose the name Novosphingobium profundi sp. nov. (type strain F72(T) = KACC 18566(T) = CGMCC 1.15390(T)).

  7. 50 CFR 665.200 - Hawaii bottomfish and seamount groundfish fisheries. [Reserved

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Hawaii bottomfish and seamount groundfish fisheries. 665.200 Section 665.200 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.200 Hawaii bottomfish and seamount groundfish fisheries....

  8. 50 CFR 665.200 - Hawaii bottomfish and seamount groundfish fisheries. [Reserved

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Hawaii bottomfish and seamount groundfish fisheries. 665.200 Section 665.200 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.200 Hawaii bottomfish and seamount groundfish fisheries....

  9. 50 CFR 665.200 - Hawaii bottomfish and seamount groundfish fisheries. [Reserved

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Hawaii bottomfish and seamount groundfish fisheries. 665.200 Section 665.200 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.200 Hawaii bottomfish and seamount groundfish fisheries....

  10. 50 CFR 665.200 - Hawaii bottomfish and seamount groundfish fisheries. [Reserved

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Hawaii bottomfish and seamount groundfish fisheries. 665.200 Section 665.200 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.200 Hawaii bottomfish and seamount groundfish fisheries....

  11. 50 CFR 665.200 - Hawaii bottomfish and seamount groundfish fisheries. [Reserved

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Hawaii bottomfish and seamount groundfish fisheries. 665.200 Section 665.200 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL... PACIFIC Hawaii Fisheries § 665.200 Hawaii bottomfish and seamount groundfish fisheries....

  12. Evidence of sub-vent biosphere: enzymatic activities in 308 °C deep-sea hydrothermal systems at Suiyo seamount, Izu Bonin Arc, Western Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Takano, Yoshinori; Edazawa, Yae; Kobayashi, Kensei; Urabe, Tetsuro; Marumo, Katsumi

    2005-01-01

    A high-temperature deep-sea hydrothermal system related to dacitic arc-volcanism was drilled using a tethered, submarine rock-drill system as a part of the Archaean Park Project. The benthic multi-coring system (BMS) employed allowed for direct sampling of microorganisms, rocks and fluids beneath hydrothermal vents. The samples examined in this study were from sites APSK 05 and APSK 07 on the Suiyo Seamount of the Izu-Bonin Arc in the Pacific Ocean. Based on the vertical distribution of samples derived from this vigorous sub-vent environment, a model of deep-sea subterranean chemistry and biology was determined detailing optimal microbial activities. Deep-sea hydrothermal sub-vent core samples of dacitic arc-volcanism obtained at the Suiyo Seamount, Izu-Bonin Arc, Western Pacific Ocean were analyzed for acid and alkaline phosphatase enzymatic activities. Useful biomarkers of acid phosphatase (ACP) and alkaline phosphatase (ALP) enzymatic activities were positively correlated against each other and was greatest at the partial middle core sequences; ACP and ALP activities determined were as high as 5.10 and 6.80 nmol/min/g rock, respectively. Biochemical indicators of ACP and ALP were consistent with the origin of biogenic amino acids occupied in the sub-vent region and microbial cell number in the fluid. The significant enzymatic activities demonstrated in this study provides crucial evidence that sub-vent regions represent part of the previously unknown extreme-environment biosphere, extending the known subterranean habitable spaces of, for example, extremophilic microbes. This boring trial was first example of discharging high temperature hydrothermal activities at the frontal arc volcanoes.

  13. Investigating the effects of high pressure upon the selective enrichment of bacteria from deep-sea sediments: Results from Loihi Seamount

    NASA Astrophysics Data System (ADS)

    Schrenk, M. O.; Sisley, C. R.; Edwards, K. J.

    2009-12-01

    High hydrostatic pressures relative to the Earth’s surface are a “fact of life” for microorganisms living in the deep-sea and in particular for those inhabiting the underlying subseafloor biosphere. Pioneering studies of deep-sea microbial populations by Zobell and colleagues in the 1950’s documented differences in the abundance and the physiological properties of microbial populations enriched at atmospheric pressure (0.1 MPa) versus those at in situ hydrostatic pressures. However, recently most studies of deep-sea microorganisms have either overlooked the importance of pressure as an enrichment parameter, or have focused on the isolation of pure cultures of piezophiles. Due to the low percentages of culturable bacteria commonly obtained from environmental samples, we investigated the use of in situ hydrostatic pressures (50 MPa) in the selective enrichment of bacterial populations from deep-sea sediments. Iron oxide rich microbial mats were collected from the seafloor at 5000 m depth near Loihi Seamount (FeMO Deep region, Ula Nui mat) in October 2008. Following homogenization, samples were inoculated into three different types of media designed for the enrichment of heterotrophic, oligotrophic, and lithoautotrophic microbial populations. Batch cultures were incubated at deep-sea temperatures of 4 degrees Celsius, at either in situ (50 MPa) or atmospheric (0.1 MPa) for up to 6 months. Following incubation, cell densities and phylogenetic diversity of microbial populations were compared in the various treatments. Growth was observed in each of the treatments, with the growth rates of the heterotrophic microcosms slightly elevated compared to the oligotrophic and lithotrophic cultures. In all cases, the growth rates and overall cell yields (approximately 10^7 cells per ml) were significantly lower than typically observed in room temperature incubations. The phylogenetic diversity of the enrichment cultures was also significantly different between treatments

  14. Insights into the ecological effects of deep ocean CO2 enrichment: The impacts of natural CO2 venting at Loihi seamount on deep sea scavengers

    NASA Astrophysics Data System (ADS)

    Vetter, Eric W.; Smith, Craig R.

    2005-09-01

    Hydrothermal vents on Loihi seamount near Hawaii emit 5000-100,000 t/yr of CO2 at water depths of 1200-1300 m, yielding CO2 concentrations as high as 418 mol/m3. Because CO2 is the dominant toxic component of these vent fluids, Loihi provides an extraordinary setting in which to explore the effects of sustained CO2 enrichment on deep sea organisms and ecological processes. We used the Pisces IV submersible to manipulate baited traps and bait parcels in Loihi's plume to explore the effects of elevated CO2 on the feeding and behavior of typical deep sea scavengers. Necrophagous lysianassid amphipods (Eurythenes cf. obesus) and synaphobranchid eels were unusually abundant in the vicinity of Loihi's vents, suggesting that the CO2-rich plumes rising above Loihi may enhance the flux of carrion to the deep sea floor. Amphipods exposed to diluted vent waters with a mean pH of 6.3 (minimum 5.7) and temperature of 5.0°C became very active within seconds and then became narcotized over timescales of 2-15 min. Following 60 min of plume exposure, all amphipods revived within 30 min of removal from the plume and remained active until warmed to 10°C during submersible ascent into ocean surface waters. Open bait parcels placed in similar CO2 plumes were avoided by amphipods and fish, suggesting that they could detect either the elevated CO2 concentrations or other environmental parameters (e.g., temperature). Our results suggest that at least some scavenging deep sea amphipods may be able to escape relatively concentrated CO2 plumes (i.e., they do not become narcotized for several minutes) and that they may revive following 1 hour exposure to an oscillating CO2 plume (e.g., one meandering in a tidal current). In addition, our results suggest that scavenging amphipods and synaphobranchid eels may be able to detect and avoid intoxicating levels of CO2 resulting from deep ocean injection of CO2 and that specialized components of the deep sea fauna (e.g., some hydrothermal vent

  15. 75 FR 27219 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-14

    ... crab fishery, including a target total allowable catch (TAC) and a fleet-wide days-at-sea (DAS) allocation. The intent of this rulemaking is to specify the target TAC and other management measures in order... England Fishery Management Council (Council) to recommend, on a triennial basis, a target TAC and a...

  16. 75 FR 45085 - Fisheries in the Western Pacific; Bottomfish and Seamount Groundfish Fisheries; 2010-11 Main...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-02

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration 50 CFR Part 665 RIN 0648-XX15 Fisheries in the Western Pacific; Bottomfish and Seamount Groundfish Fisheries; 2010-11 Main Hawaiian Islands Bottomfish...

  17. Demography of a deep-sea lantern shark (Etmopterus spinax) caught in trawl fisheries of the northeastern Atlantic: Application of Leslie matrices with incorporated uncertainties

    NASA Astrophysics Data System (ADS)

    Coelho, Rui; Alpizar-Jara, Russell; Erzini, Karim

    2015-05-01

    The deep-sea lantern shark Etmopterus spinax occurs in the northeast Atlantic on or near the bottoms of the outer continental shelves and slopes, and is regularly captured as bycatch in deep-water commercial fisheries. Given the lack of knowledge on the impacts of fisheries on this species, a demographic analysis using age-based Leslie matrices was carried out. Given the uncertainties in the mortality estimates and in the available life history parameters, several different scenarios, some incorporating stochasticity in the life history parameters (using Monte Carlo simulation), were analyzed. If only natural mortality were considered, even after introducing uncertainties in all parameters, the estimated population growth rate (λ) suggested an increasing population. However, if fishing mortality from trawl fisheries is considered, the estimates of λ either indicated increasing or declining populations. In these latter cases, the uncertainties in the species reproductive cycle seemed to be particularly relevant, as a 2-year reproductive cycle indicated a stable population, while a longer (3-year cycle) indicated a declining population. The estimated matrix elasticities were in general higher for the survivorship parameters of the younger age classes and tended to decrease for the older ages. This highlights the susceptibility of this deep-sea squaloid to increasing fishing mortality, emphasizing that even though this is a small-sized species, it shows population dynamics patterns more typical of the larger-sized and in general more vulnerable species.

  18. Reconstruction of demersal fisheries history on the Condor seamount, Azores archipelago (Northeast Atlantic)

    NASA Astrophysics Data System (ADS)

    Menezes, Gui M.; Diogo, Hugo; Giacomello, Eva

    2013-12-01

    Commercial fishing data were analyzed in order to reconstruct the history of the demersal fishery on Condor seamount, a temporarily protected area in the Northeast Atlantic (Azores). Considering the eight commercially most important demersal fish species, estimates for the period 1993-2009 revealed that on average landings from this area represented 2% of the annual landings by weight of these species in the Azores. Over this period the average estimated volume of the Condor landings was 71t/year, with the blackspot seabream (Pagellus bogaraveo) and the wreckfish (Polyprion americanus) representing about 54% of the landings, and the average value was €346 thousand per year. Annual trends of landings and of landings per unit effort suggest species-specific abundance responses to fishing, but most of the exploited species may have been significantly reduced at the Condor seamount. The proportion of large specimens may have declined in some of the studied species. Results suggest that artisanal fisheries are capable of causing important reductions in abundance levels of demersal species living on seamounts. Species life history characteristics, their degree of residency, and dependence on outside source areas may be important determinants for the status and the time scales required for recovery to previous abundances of the species. With the current Condor seamount fishing moratorium, exploitation rate has been reduced to zero and this is a unique opportunity to study the responses of the different previously exploited species to the reduced fishing mortality. New understanding may benefit seamount fisheries management in the region.

  19. Benthic Assemblages of the Anton Dohrn Seamount (NE Atlantic): Defining Deep-Sea Biotopes to Support Habitat Mapping and Management Efforts with a Focus on Vulnerable Marine Ecosystems

    PubMed Central

    Davies, Jaime S.; Stewart, Heather A.; Narayanaswamy, Bhavani E.; Jacobs, Colin; Spicer, John; Golding, Neil; Howell, Kerry L.

    2015-01-01

    In 2009 the NW and SE flanks of Anton Dohrn Seamount were surveyed using multibeam echosounder and video ground-truthing to characterise megabenthic biological assemblages (biotopes) and assess those which clearly adhere to the definition of Vulnerable Marine Ecosystems, for use in habitat mapping. A combination of multivariate analysis of still imagery and video ground-truthing defined 13 comprehensive descriptions of biotopes that function as mapping units in an applied context. The data reveals that the NW and SE sides of Anton Dohrn Seamount (ADS) are topographically complex and harbour diverse biological assemblages, some of which agree with current definitions of ‘listed’ habitats of conservation concern. Ten of these biotopes could easily be considered Vulnerable Marine Ecosystems; three coral gardens, four cold-water coral reefs, two xenophyophore communities and one sponge dominated community, with remaining biotopes requiring more detailed assessment. Coral gardens were only found on positive geomorphic features, namely parasitic cones and radial ridges, found both sides of the seamount over a depth of 1311–1740 m. Two cold-water coral reefs (equivalent to summit reef) were mapped on the NW side of the seamount; Lophelia pertusa reef associated with the cliff top mounds at a depth of 747–791 m and Solenosmilia variabilis reef on a radial ridge at a depth of 1318-1351 m. Xenophyophore communities were mapped from both sides of the seamount at a depth of 1099–1770 m and were either associated with geomorphic features or were in close proximity (< 100 m) to them. The sponge dominated community was found on the steep escarpment either side of the seamount over at a depth of 854-1345 m. Multivariate diversity revealed the xenophyophore biotopes to be the least diverse, and a hard substratum biotope characterised by serpulids and the sessile holothurian, Psolus squamatus, as the most diverse. PMID:25992572

  20. Benthic Assemblages of the Anton Dohrn Seamount (NE Atlantic): Defining Deep-Sea Biotopes to Support Habitat Mapping and Management Efforts with a Focus on Vulnerable Marine Ecosystems.

    PubMed

    Davies, Jaime S; Stewart, Heather A; Narayanaswamy, Bhavani E; Jacobs, Colin; Spicer, John; Golding, Neil; Howell, Kerry L

    2015-01-01

    In 2009 the NW and SE flanks of Anton Dohrn Seamount were surveyed using multibeam echosounder and video ground-truthing to characterise megabenthic biological assemblages (biotopes) and assess those which clearly adhere to the definition of Vulnerable Marine Ecosystems, for use in habitat mapping. A combination of multivariate analysis of still imagery and video ground-truthing defined 13 comprehensive descriptions of biotopes that function as mapping units in an applied context. The data reveals that the NW and SE sides of Anton Dohrn Seamount (ADS) are topographically complex and harbour diverse biological assemblages, some of which agree with current definitions of 'listed' habitats of conservation concern. Ten of these biotopes could easily be considered Vulnerable Marine Ecosystems; three coral gardens, four cold-water coral reefs, two xenophyophore communities and one sponge dominated community, with remaining biotopes requiring more detailed assessment. Coral gardens were only found on positive geomorphic features, namely parasitic cones and radial ridges, found both sides of the seamount over a depth of 1311-1740 m. Two cold-water coral reefs (equivalent to summit reef) were mapped on the NW side of the seamount; Lophelia pertusa reef associated with the cliff top mounds at a depth of 747-791 m and Solenosmilia variabilis reef on a radial ridge at a depth of 1318-1351 m. Xenophyophore communities were mapped from both sides of the seamount at a depth of 1099-1770 m and were either associated with geomorphic features or were in close proximity (< 100 m) to them. The sponge dominated community was found on the steep escarpment either side of the seamount over at a depth of 854-1345 m. Multivariate diversity revealed the xenophyophore biotopes to be the least diverse, and a hard substratum biotope characterised by serpulids and the sessile holothurian, Psolus squamatus, as the most diverse.

  1. The Census of Marine Life on Seamounts: results from a global science program

    NASA Astrophysics Data System (ADS)

    Stocks, K.; Clark, M.; Rowden, A.; Consalvey, M.

    2010-12-01

    , Convention on Biological Diversity, and Regional Fisheries Management Organizations; 5) protocols manuals and guides to facilitate standardization of methodology, including a Wiley Blackwell book, Biological Sampling in the Deep-Sea, due to be published 2011; and 6) SeamountsOnline, a central database of global seamount data (5500 taxa from 258 seamounts) to support research and management (seamounts.sdsc.edu). CenSeam has also had Societal impacts. It has fostered collaborative research to expand global seamount sampling to previously understudied regions. It has increased public awareness of seamounts and the wider deep-sea, for example through expedition web logs to share the experiences of researchers at sea. And CenSeam has provided quality science to inform the management of commercial fisheries and mining, such as a practical seamount classification scheme for protected area planning, and maps of predicted coral habitat suitability.

  2. Man and the Last Great Wilderness: Human Impact on the Deep Sea

    PubMed Central

    Ramirez-Llodra, Eva; Tyler, Paul A.; Baker, Maria C.; Bergstad, Odd Aksel; Clark, Malcolm R.; Escobar, Elva; Levin, Lisa A.; Menot, Lenaick; Rowden, Ashley A.; Smith, Craig R.; Van Dover, Cindy L.

    2011-01-01

    The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life – SYNDEEP workshop (September 2008). A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past) to exploitation (present). We predict that from now and into the future, increases in atmospheric CO2 and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO2 and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this review with a short

  3. Man and the last great wilderness: human impact on the deep sea.

    PubMed

    Ramirez-Llodra, Eva; Tyler, Paul A; Baker, Maria C; Bergstad, Odd Aksel; Clark, Malcolm R; Escobar, Elva; Levin, Lisa A; Menot, Lenaick; Rowden, Ashley A; Smith, Craig R; Van Dover, Cindy L

    2011-01-01

    The deep sea, the largest ecosystem on Earth and one of the least studied, harbours high biodiversity and provides a wealth of resources. Although humans have used the oceans for millennia, technological developments now allow exploitation of fisheries resources, hydrocarbons and minerals below 2000 m depth. The remoteness of the deep seafloor has promoted the disposal of residues and litter. Ocean acidification and climate change now bring a new dimension of global effects. Thus the challenges facing the deep sea are large and accelerating, providing a new imperative for the science community, industry and national and international organizations to work together to develop successful exploitation management and conservation of the deep-sea ecosystem. This paper provides scientific expert judgement and a semi-quantitative analysis of past, present and future impacts of human-related activities on global deep-sea habitats within three categories: disposal, exploitation and climate change. The analysis is the result of a Census of Marine Life--SYNDEEP workshop (September 2008). A detailed review of known impacts and their effects is provided. The analysis shows how, in recent decades, the most significant anthropogenic activities that affect the deep sea have evolved from mainly disposal (past) to exploitation (present). We predict that from now and into the future, increases in atmospheric CO(2) and facets and consequences of climate change will have the most impact on deep-sea habitats and their fauna. Synergies between different anthropogenic pressures and associated effects are discussed, indicating that most synergies are related to increased atmospheric CO(2) and climate change effects. We identify deep-sea ecosystems we believe are at higher risk from human impacts in the near future: benthic communities on sedimentary upper slopes, cold-water corals, canyon benthic communities and seamount pelagic and benthic communities. We finalise this review with a short

  4. Deep-Sea decapod crustaceans (Caridea, Polychelida, Anomura and Brachyura) collected from the Nikko Seamounts, Mariana Arc, using a remotely operated vehicle "Hyper-Dolphin".

    PubMed

    Komai, Tomoyuki; Tsuchida, Shinji

    2014-02-11

    Samples and images of deep-water benthic decapod crustaceans were collected from the Nikko Seamounts, Mariana Arc, at depths of 520-680 m, by using the remotely operate vehicle "Hyper-Dolphin", equipped with a high definition camera, digital camera, manipulators and slurp gun (suction sampler). The following seven species were collected, of which three are new to science: Plesionika unicolor n. sp. (Caridea: Pandalidae), Homeryon armarium Galil, 2000 (Polychelida: Polychelidae), Eumunida nikko n. sp. (Anomura: Eumunididae), Michelopagurus limatulus (Henderson, 1888) (Anomura: Paguridae), Galilia petricola n. sp. (Brachyura: Leucosiidae), Cyrtomaia micronesica Richer de Forges & Ng, 2007 (Brachyura: Inachidae), and Progeryon mus Ng & Guinot, 1999 (Brachyura: Progeryonidae). Affinities of these three new species are discussed. All but H. armarium are recorded from the Japanese Exclusive Economic Zone for the first time. Brief notes on ecology and/or behavior are given for each species.

  5. Science Priorities for Seamounts: Research Links to Conservation and Management

    PubMed Central

    Clark, Malcolm R.; Schlacher, Thomas A.; Rowden, Ashley A.; Stocks, Karen I.; Consalvey, Mireille

    2012-01-01

    Seamounts shape the topography of all ocean basins and can be hotspots of biological activity in the deep sea. The Census of Marine Life on Seamounts (CenSeam) was a field program that examined seamounts as part of the global Census of Marine Life (CoML) initiative from 2005 to 2010. CenSeam progressed seamount science by collating historical data, collecting new data, undertaking regional and global analyses of seamount biodiversity, mapping species and habitat distributions, challenging established paradigms of seamount ecology, developing new hypotheses, and documenting the impacts of human activities on seamounts. However, because of the large number of seamounts globally, much about the structure, function and connectivity of seamount ecosystems remains unexplored and unknown. Continual, and potentially increasing, threats to seamount resources from fishing and seabed mining are creating a pressing demand for research to inform conservation and management strategies. To meet this need, intensive science effort in the following areas will be needed: 1) Improved physical and biological data; of particular importance is information on seamount location, physical characteristics (e.g. habitat heterogeneity and complexity), more complete and intensive biodiversity inventories, and increased understanding of seamount connectivity and faunal dispersal; 2) New human impact data; these shall encompass better studies on the effects of human activities on seamount ecosystems, as well as monitoring long-term changes in seamount assemblages following impacts (e.g. recovery); 3) Global data repositories; there is a pressing need for more comprehensive fisheries catch and effort data, especially on the high seas, and compilation or maintenance of geological and biodiversity databases that underpin regional and global analyses; 4) Application of support tools in a data-poor environment; conservation and management will have to increasingly rely on predictive modelling

  6. Science priorities for seamounts: research links to conservation and management.

    PubMed

    Clark, Malcolm R; Schlacher, Thomas A; Rowden, Ashley A; Stocks, Karen I; Consalvey, Mireille

    2012-01-01

    Seamounts shape the topography of all ocean basins and can be hotspots of biological activity in the deep sea. The Census of Marine Life on Seamounts (CenSeam) was a field program that examined seamounts as part of the global Census of Marine Life (CoML) initiative from 2005 to 2010. CenSeam progressed seamount science by collating historical data, collecting new data, undertaking regional and global analyses of seamount biodiversity, mapping species and habitat distributions, challenging established paradigms of seamount ecology, developing new hypotheses, and documenting the impacts of human activities on seamounts. However, because of the large number of seamounts globally, much about the structure, function and connectivity of seamount ecosystems remains unexplored and unknown. Continual, and potentially increasing, threats to seamount resources from fishing and seabed mining are creating a pressing demand for research to inform conservation and management strategies. To meet this need, intensive science effort in the following areas will be needed: 1) Improved physical and biological data; of particular importance is information on seamount location, physical characteristics (e.g. habitat heterogeneity and complexity), more complete and intensive biodiversity inventories, and increased understanding of seamount connectivity and faunal dispersal; 2) New human impact data; these shall encompass better studies on the effects of human activities on seamount ecosystems, as well as monitoring long-term changes in seamount assemblages following impacts (e.g. recovery); 3) Global data repositories; there is a pressing need for more comprehensive fisheries catch and effort data, especially on the high seas, and compilation or maintenance of geological and biodiversity databases that underpin regional and global analyses; 4) Application of support tools in a data-poor environment; conservation and management will have to increasingly rely on predictive modelling

  7. Paraphelliactis tangi n. sp. and Phelliactis yapensis n. sp., two new deep-sea species of Hormathiidae (Cnidaria: Anthozoa: Actiniaria) from a seamount in the tropical Western Pacific.

    PubMed

    Li, Yang; Xu, Kuidong

    2016-02-02

    Two new species of hormathiid actiniarians, Paraphelliactis tangi n. sp. and Phelliactis yapensis n. sp., are described from a seamount near the Yap Trench in the tropical Western Pacific. Paraphelliactis tangi n. sp. has a thick cuticle, a tuberculated column divisible into scapus and scapulus, a complete fifth cycle of mesenteries, an equal number of mesenteries at the margin and at the limbus, and up to 192 tentacles without aboral mesogloeal thickenings that are hexamerously arranged in six cycles. This species differs distinctly from the three known species of Paraphelliactis by the above mentioned features (vs. an incomplete fifth cycle of mesenteries, usually more mesenteries at the margin than at the limbus, and the tentacles with aboral mesogloeal thickenings). So far, it is the only member of the genus Paraphelliactis found in the Western Pacific. Phelliactis yapensis n. sp. has an asymmetric bilobed oral disc and column, tuberculated scapus and scapulus, an incomplete fifth cycle of mesenteries, and up to 162 tentacles with aboral mesogloeal thickenings that are alternately arranged in two cycles. In comparison with other Phelliactis species, the basitrichs of mesenterial filaments of Ph. yapensis are distinctly larger. Phelliactis yapensis n. sp. is the fourth species of Phelliactis found in the Western Pacific.

  8. Analysis of Dissimilatory Sulfite Reductase and 16S rRNA Gene Fragments from Deep-Sea Hydrothermal Sites of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific

    PubMed Central

    Nakagawa, Tatsunori; Ishibashi, Jun-Ichiro; Maruyama, Akihiko; Yamanaka, Toshiro; Morimoto, Yusuke; Kimura, Hiroyuki; Urabe, Tetsuro; Fukui, Manabu

    2004-01-01

    This study describes the occurrence of unique dissimilatory sulfite reductase (DSR) genes at a depth of 1,380 m from the deep-sea hydrothermal vent field at the Suiyo Seamount, Izu-Bonin Arc, Western Pacific, Japan. The DSR genes were obtained from microbes that grew in a catheter-type in situ growth chamber deployed for 3 days on a vent and from the effluent water of drilled holes at 5°C and natural vent fluids at 7°C. DSR clones SUIYOdsr-A and SUIYOdsr-B were not closely related to cultivated species or environmental clones. Moreover, samples of microbial communities were examined by PCR-denaturing gradient gel electrophoresis (DGGE) analysis of the 16S rRNA gene. The sequence analysis of 16S rRNA gene fragments obtained from the vent catheter after a 3-day incubation revealed the occurrence of bacterial DGGE bands affiliated with the Aquificae and γ- and ɛ-Proteobacteria as well as the occurrence of archaeal phylotypes affiliated with the Thermococcales and of a unique archaeon sequence that clustered with “Nanoarchaeota.” The DGGE bands obtained from drilled holes and natural vent fluids from 7 to 300°C were affiliated with the δ-Proteobacteria, genus Thiomicrospira, and Pelodictyon. The dominant DGGE bands retrieved from the effluent water of casing pipes at 3 and 4°C were closely related to phylotypes obtained from the Arctic Ocean. Our results suggest the presence of microorganisms corresponding to a unique DSR lineage not detected previously from other geothermal environments. PMID:14711668

  9. 75 FR 52921 - Fisheries in the Western Pacific; Hawaii Bottomfish and Seamount Groundfish; Management Measures...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-30

    ... Pacific; Hawaii Bottomfish and Seamount Groundfish; Management Measures for Hancock Seamounts to Rebuild... continue a moratorium on fishing for bottomfish and seamount groundfish at the Hancock Seamounts until the... also reclassify the management area around the Hancock Seamounts as an ecosystem management area....

  10. Deep sea waste disposal

    SciTech Connect

    Kester, D.R.; Burt, W.V.; Capuzzo, J.M.; Park, P.K.; Ketchum, B.W.; Duedall, I.W.

    1985-01-01

    The book presents papers on the marine disposal of wastes. Topics considered include incineration at sea, the modelling and biological effects of industrial wastes, microbial studies of ocean dumping, deep-sea mining wastes, the chemical analysis of ferromanganese nodules, and economic aspects of deep-sea disposal.

  11. 76 FR 54715 - Western Pacific Bottomfish and Seamount Groundfish Fisheries; 2011-12 Main Hawaiian Islands Deep...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-09-02

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration 50 CFR Part 665 RIN 0648-XA470 Western Pacific Bottomfish and Seamount Groundfish Fisheries; 2011-12 Main Hawaiian Islands Deep 7 Bottomfish Annual Catch...

  12. Ploughing the deep sea floor.

    PubMed

    Puig, Pere; Canals, Miquel; Company, Joan B; Martín, Jacobo; Amblas, David; Lastras, Galderic; Palanques, Albert

    2012-09-13

    Bottom trawling is a non-selective commercial fishing technique whereby heavy nets and gear are pulled along the sea floor. The direct impact of this technique on fish populations and benthic communities has received much attention, but trawling can also modify the physical properties of seafloor sediments, water–sediment chemical exchanges and sediment fluxes. Most of the studies addressing the physical disturbances of trawl gear on the seabed have been undertaken in coastal and shelf environments, however, where the capacity of trawling to modify the seafloor morphology coexists with high-energy natural processes driving sediment erosion, transport and deposition. Here we show that on upper continental slopes, the reworking of the deep sea floor by trawling gradually modifies the shape of the submarine landscape over large spatial scales. We found that trawling-induced sediment displacement and removal from fishing grounds causes the morphology of the deep sea floor to become smoother over time, reducing its original complexity as shown by high-resolution seafloor relief maps. Our results suggest that in recent decades, following the industrialization of fishing fleets, bottom trawling has become an important driver of deep seascape evolution. Given the global dimension of this type of fishery, we anticipate that the morphology of the upper continental slope in many parts of the world’s oceans could be altered by intensive bottom trawling, producing comparable effects on the deep sea floor to those generated by agricultural ploughing on land.

  13. Extreme Longevity in Proteinaceous Deep-Sea Corals

    SciTech Connect

    Roark, E B; Guilderson, T P; Dunbar, R B; Fallon, S J; Mucciarone, D A

    2009-02-09

    Deep-sea corals are found on hard substrates on seamounts and continental margins world-wide at depths of 300 to {approx}3000 meters. Deep-sea coral communities are hotspots of deep ocean biomass and biodiversity, providing critical habitat for fish and invertebrates. Newly applied radiocarbon age date from the deep water proteinaceous corals Gerardia sp. and Leiopathes glaberrima show that radial growth rates are as low as 4 to 35 {micro}m yr{sup -1} and that individual colony longevities are on the order of thousands of years. The management and conservation of deep sea coral communities is challenged by their commercial harvest for the jewelry trade and damage caused by deep water fishing practices. In light of their unusual longevity, a better understanding of deep sea coral ecology and their interrelationships with associated benthic communities is needed to inform coherent international conservation strategies for these important deep-sea ecosystems.

  14. 75 FR 51237 - Fisheries in the Western Pacific; Hawaii Bottomfish and Seamount Groundfish; Management Measures...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-19

    ... Pacific; Hawaii Bottomfish and Seamount Groundfish; Management Measures for Hancock Seamounts to Rebuild...), Amendment 2 would continue a moratorium on fishing at Hancock Seamounts for armorhead (Pseudopentaceros wheeleri) and other bottomfish and seamount groundfish until the armorhead stock is rebuilt, establish...

  15. Climate Influence on Deep Sea Populations

    PubMed Central

    Company, Joan B.; Puig, Pere; Sardà, Francesc; Palanques, Albert; Latasa, Mikel; Scharek, Renate

    2008-01-01

    Dynamics of biological processes on the deep-sea floor are traditionally thought to be controlled by vertical sinking of particles from the euphotic zone at a seasonal scale. However, little is known about the influence of lateral particle transport from continental margins to deep-sea ecosystems. To address this question, we report here how the formation of dense shelf waters and their subsequent downslope cascade, a climate induced phenomenon, affects the population of the deep-sea shrimp Aristeus antennatus. We found evidence that strong currents associated with intense cascading events correlates with the disappearance of this species from its fishing grounds, producing a temporary fishery collapse. Despite this initial negative effect, landings increase between 3 and 5 years after these major events, preceded by an increase of juveniles. The transport of particulate organic matter associated with cascading appears to enhance the recruitment of this deep-sea living resource, apparently mitigating the general trend of overexploitation. Because cascade of dense water from continental shelves is a global phenomenon, we anticipate that its influence on deep-sea ecosystems and fisheries worldwide should be larger than previously thought. PMID:18197243

  16. Climate influence on deep sea populations.

    PubMed

    Company, Joan B; Puig, Pere; Sardà, Francesc; Palanques, Albert; Latasa, Mikel; Scharek, Renate

    2008-01-16

    Dynamics of biological processes on the deep-sea floor are traditionally thought to be controlled by vertical sinking of particles from the euphotic zone at a seasonal scale. However, little is known about the influence of lateral particle transport from continental margins to deep-sea ecosystems. To address this question, we report here how the formation of dense shelf waters and their subsequent downslope cascade, a climate induced phenomenon, affects the population of the deep-sea shrimp Aristeus antennatus. We found evidence that strong currents associated with intense cascading events correlates with the disappearance of this species from its fishing grounds, producing a temporary fishery collapse. Despite this initial negative effect, landings increase between 3 and 5 years after these major events, preceded by an increase of juveniles. The transport of particulate organic matter associated with cascading appears to enhance the recruitment of this deep-sea living resource, apparently mitigating the general trend of overexploitation. Because cascade of dense water from continental shelves is a global phenomenon, we anticipate that its influence on deep-sea ecosystems and fisheries worldwide should be larger than previously thought.

  17. The dynamics of biogeographic ranges in the deep sea.

    PubMed

    McClain, Craig R; Hardy, Sarah Mincks

    2010-12-07

    Anthropogenic disturbances such as fishing, mining, oil drilling, bioprospecting, warming, and acidification in the deep sea are increasing, yet generalities about deep-sea biogeography remain elusive. Owing to the lack of perceived environmental variability and geographical barriers, ranges of deep-sea species were traditionally assumed to be exceedingly large. In contrast, seamount and chemosynthetic habitats with reported high endemicity challenge the broad applicability of a single biogeographic paradigm for the deep sea. New research benefiting from higher resolution sampling, molecular methods and public databases can now more rigorously examine dispersal distances and species ranges on the vast ocean floor. Here, we explore the major outstanding questions in deep-sea biogeography. Based on current evidence, many taxa appear broadly distributed across the deep sea, a pattern replicated in both the abyssal plains and specialized environments such as hydrothermal vents. Cold waters may slow larval metabolism and development augmenting the great intrinsic ability for dispersal among many deep-sea species. Currents, environmental shifts, and topography can prove to be dispersal barriers but are often semipermeable. Evidence of historical events such as points of faunal origin and climatic fluctuations are also evident in contemporary biogeographic ranges. Continued synthetic analysis, database construction, theoretical advancement and field sampling will be required to further refine hypotheses regarding deep-sea biogeography.

  18. Engineering for Deep Sea Drilling for Scientific Purposes

    DTIC Science & Technology

    1980-01-01

    Atmospheric Leonard C. Heoer Administration Center for Law and Social Policy National Fisheries Service Washington, D.C. Seattle, Washington J. Robert...the Gulf of Mexico appears to have released some 3 million barrels of crude oil. 394 Site selection for scientific deep sea drilling should be...the horizon that can meet the demands of the deep sea drilling programas described by NSF to the committee in September 1979. Thus, sucha vessel would

  19. Population Genetic Structure of the Deep-Sea Precious Coral Corallium secundum from the Hawaiian Archipelago Based on Microsatellites.

    NASA Astrophysics Data System (ADS)

    Baco-Taylor, A.

    2006-12-01

    Deep-sea precious corals (Gerardia sp., Corallium lauuense, and Corallium secundum) on the Islands and seamounts of the Hawaiian Archipelago have supported an extremely profitable fishery, yet little is known about the life history and dispersal of the exploited species. Recent studies indicate significant genetic structure between shallow-water coral populations, including several species capable of long distance dispersal. If significant genetic structure exists in seamount and Island populations of precious corals, this could suggest that the elimination (through overharvesting) of a bed of precious corals would result in loss of overall genetic diversity in the species. Here I discuss results based on microsatellite studies of the precious coral, Corallium secundum, from 11 sites in the Hawaiian Archipelago collected between 1998 and 2004, and compare the population genetic structure and dispersal capabilities of Corallium secundum to the results for Corallium lauuense. Microsatellite studies of Corallium lauuense indicated significant heterozygote deficiency in most populations, suggesting recruitment in most populations is from local sources with only occasional long-distance dispersal events. Also, two populations appear to be significantly isolated from other populations of Corallium lauuense and may be separate stocks. In contrast, Corallium secundum populations have little heterozygote deficiency and separate into 3 distinct regions. In addition to having fisheries management implications for these corals, the results of these studies also have implications for the management and protection of seamount fauna.

  20. Deep-sea crustacean trawling fisheries in Portugal: quantification of effort and assessment of landings per unit effort using a Vessel Monitoring System (VMS).

    PubMed

    Bueno-Pardo, Juan; Ramalho, Sofia P; García-Alegre, Ana; Morgado, Mariana; Vieira, Rui P; Cunha, Marina R; Queiroga, Henrique

    2017-01-18

    Mapping and quantifying bottom trawling fishing pressure on the seafloor is pivotal to understand its effects on deep-sea benthic habitats. Using data from the Vessel Monitoring System of crustacean trawlers along the Portuguese margin, we have identified the most exploited areas and characterized the most targeted habitats and water depths. We estimated a total trawling effort of 69596, 66766, and 63427 h y(-1) for the years 2012, 2013, and 2014 respectively which, considering the total landings estimated for this gear, yield values of 20.76, 21.06, and 19.11 kg of landed fish per trawled hour. The main trawling pressure is exerted in the South and Southwest Portuguese margins, on muddy and muddy-sand bottoms between 200 and 700 m water depths, while in the North and Central-West coasts a minor effort, at shallower waters and across a wider range of habitats, is also applied. The most landed species are crustaceans such as rose shrimp and Norway lobster, although this varies importantly between the different regions of Portugal, being fish and cephalopods the main captures in the Northern ports. We discuss the consequences of trawling for the impacted communities as well as the characteristics of the commercialization of these captures in Portugal.

  1. Deep-sea crustacean trawling fisheries in Portugal: quantification of effort and assessment of landings per unit effort using a Vessel Monitoring System (VMS)

    NASA Astrophysics Data System (ADS)

    Bueno-Pardo, Juan; Ramalho, Sofia P.; García-Alegre, Ana; Morgado, Mariana; Vieira, Rui P.; Cunha, Marina R.; Queiroga, Henrique

    2017-01-01

    Mapping and quantifying bottom trawling fishing pressure on the seafloor is pivotal to understand its effects on deep-sea benthic habitats. Using data from the Vessel Monitoring System of crustacean trawlers along the Portuguese margin, we have identified the most exploited areas and characterized the most targeted habitats and water depths. We estimated a total trawling effort of 69596, 66766, and 63427 h y‑1 for the years 2012, 2013, and 2014 respectively which, considering the total landings estimated for this gear, yield values of 20.76, 21.06, and 19.11 kg of landed fish per trawled hour. The main trawling pressure is exerted in the South and Southwest Portuguese margins, on muddy and muddy-sand bottoms between 200 and 700 m water depths, while in the North and Central-West coasts a minor effort, at shallower waters and across a wider range of habitats, is also applied. The most landed species are crustaceans such as rose shrimp and Norway lobster, although this varies importantly between the different regions of Portugal, being fish and cephalopods the main captures in the Northern ports. We discuss the consequences of trawling for the impacted communities as well as the characteristics of the commercialization of these captures in Portugal.

  2. Deep-sea crustacean trawling fisheries in Portugal: quantification of effort and assessment of landings per unit effort using a Vessel Monitoring System (VMS)

    PubMed Central

    Bueno-Pardo, Juan; Ramalho, Sofia P.; García-Alegre, Ana; Morgado, Mariana; Vieira, Rui P.; Cunha, Marina R.; Queiroga, Henrique

    2017-01-01

    Mapping and quantifying bottom trawling fishing pressure on the seafloor is pivotal to understand its effects on deep-sea benthic habitats. Using data from the Vessel Monitoring System of crustacean trawlers along the Portuguese margin, we have identified the most exploited areas and characterized the most targeted habitats and water depths. We estimated a total trawling effort of 69596, 66766, and 63427 h y−1 for the years 2012, 2013, and 2014 respectively which, considering the total landings estimated for this gear, yield values of 20.76, 21.06, and 19.11 kg of landed fish per trawled hour. The main trawling pressure is exerted in the South and Southwest Portuguese margins, on muddy and muddy-sand bottoms between 200 and 700 m water depths, while in the North and Central-West coasts a minor effort, at shallower waters and across a wider range of habitats, is also applied. The most landed species are crustaceans such as rose shrimp and Norway lobster, although this varies importantly between the different regions of Portugal, being fish and cephalopods the main captures in the Northern ports. We discuss the consequences of trawling for the impacted communities as well as the characteristics of the commercialization of these captures in Portugal. PMID:28098211

  3. 50 CFR 665.209 - Fishing moratorium at Hancock Seamounts.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Fishing moratorium at Hancock Seamounts... Hawaii Fisheries § 665.209 Fishing moratorium at Hancock Seamounts. Fishing for, and possession of, Hawaii bottomfish and seamount groundfish MUS in the Hancock Seamounts Ecosystem Management Area...

  4. 50 CFR 665.209 - Fishing moratorium on Hancock Seamount.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Fishing moratorium on Hancock Seamount... Hawaii Fisheries § 665.209 Fishing moratorium on Hancock Seamount. Fishing for Hawaii bottomfish and seamount groundfish MUS on the Hancock Seamount is prohibited through August 31, 2010....

  5. 50 CFR 665.209 - Fishing moratorium at Hancock Seamounts.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Fishing moratorium at Hancock Seamounts... Hawaii Fisheries § 665.209 Fishing moratorium at Hancock Seamounts. Fishing for, and possession of, Hawaii bottomfish and seamount groundfish MUS in the Hancock Seamounts Ecosystem Management Area...

  6. 50 CFR 665.209 - Fishing moratorium at Hancock Seamounts.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Fishing moratorium at Hancock Seamounts... Hawaii Fisheries § 665.209 Fishing moratorium at Hancock Seamounts. Fishing for, and possession of, Hawaii bottomfish and seamount groundfish MUS in the Hancock Seamounts Ecosystem Management Area...

  7. 50 CFR 665.209 - Fishing moratorium at Hancock Seamounts.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Fishing moratorium at Hancock Seamounts... Hawaii Fisheries § 665.209 Fishing moratorium at Hancock Seamounts. Fishing for, and possession of, Hawaii bottomfish and seamount groundfish MUS in the Hancock Seamounts Ecosystem Management Area...

  8. A Deep-Sea Simulation.

    ERIC Educational Resources Information Center

    Montes, Georgia E.

    1997-01-01

    Describes an activity that simulates exploration techniques used in deep-sea explorations and teaches students how this technology can be used to take a closer look inside volcanoes, inspect hazardous waste sites such as nuclear reactors, and explore other environments dangerous to humans. (DDR)

  9. Species distribution models of tropical deep-sea snappers.

    PubMed

    Gomez, Céline; Williams, Ashley J; Nicol, Simon J; Mellin, Camille; Loeun, Kim L; Bradshaw, Corey J A

    2015-01-01

    Deep-sea fisheries provide an important source of protein to Pacific Island countries and territories that are highly dependent on fish for food security. However, spatial management of these deep-sea habitats is hindered by insufficient data. We developed species distribution models using spatially limited presence data for the main harvested species in the Western Central Pacific Ocean. We used bathymetric and water temperature data to develop presence-only species distribution models for the commercially exploited deep-sea snappers Etelis Cuvier 1828, Pristipomoides Valenciennes 1830, and Aphareus Cuvier 1830. We evaluated the performance of four different algorithms (CTA, GLM, MARS, and MAXENT) within the BIOMOD framework to obtain an ensemble of predicted distributions. We projected these predictions across the Western Central Pacific Ocean to produce maps of potential deep-sea snapper distributions in 32 countries and territories. Depth was consistently the best predictor of presence for all species groups across all models. Bathymetric slope was consistently the poorest predictor. Temperature at depth was a good predictor of presence for GLM only. Model precision was highest for MAXENT and CTA. There were strong regional patterns in predicted distribution of suitable habitat, with the largest areas of suitable habitat (> 35% of the Exclusive Economic Zone) predicted in seven South Pacific countries and territories (Fiji, Matthew & Hunter, Nauru, New Caledonia, Tonga, Vanuatu and Wallis & Futuna). Predicted habitat also varied among species, with the proportion of predicted habitat highest for Aphareus and lowest for Etelis. Despite data paucity, the relationship between deep-sea snapper presence and their environments was sufficiently strong to predict their distribution across a large area of the Pacific Ocean. Our results therefore provide a strong baseline for designing monitoring programs that balance resource exploitation and conservation planning, and

  10. Species Distribution Models of Tropical Deep-Sea Snappers

    PubMed Central

    Gomez, Céline; Williams, Ashley J.; Nicol, Simon J.; Mellin, Camille; Loeun, Kim L.; Bradshaw, Corey J. A.

    2015-01-01

    Deep-sea fisheries provide an important source of protein to Pacific Island countries and territories that are highly dependent on fish for food security. However, spatial management of these deep-sea habitats is hindered by insufficient data. We developed species distribution models using spatially limited presence data for the main harvested species in the Western Central Pacific Ocean. We used bathymetric and water temperature data to develop presence-only species distribution models for the commercially exploited deep-sea snappers Etelis Cuvier 1828, Pristipomoides Valenciennes 1830, and Aphareus Cuvier 1830. We evaluated the performance of four different algorithms (CTA, GLM, MARS, and MAXENT) within the BIOMOD framework to obtain an ensemble of predicted distributions. We projected these predictions across the Western Central Pacific Ocean to produce maps of potential deep-sea snapper distributions in 32 countries and territories. Depth was consistently the best predictor of presence for all species groups across all models. Bathymetric slope was consistently the poorest predictor. Temperature at depth was a good predictor of presence for GLM only. Model precision was highest for MAXENT and CTA. There were strong regional patterns in predicted distribution of suitable habitat, with the largest areas of suitable habitat (> 35% of the Exclusive Economic Zone) predicted in seven South Pacific countries and territories (Fiji, Matthew & Hunter, Nauru, New Caledonia, Tonga, Vanuatu and Wallis & Futuna). Predicted habitat also varied among species, with the proportion of predicted habitat highest for Aphareus and lowest for Etelis. Despite data paucity, the relationship between deep-sea snapper presence and their environments was sufficiently strong to predict their distribution across a large area of the Pacific Ocean. Our results therefore provide a strong baseline for designing monitoring programs that balance resource exploitation and conservation planning, and

  11. Ecosystem function and services provided by the deep sea

    NASA Astrophysics Data System (ADS)

    Thurber, A. R.; Sweetman, A. K.; Narayanaswamy, B. E.; Jones, D. O. B.; Ingels, J.; Hansman, R. L.

    2014-07-01

    The deep sea is often viewed as a vast, dark, remote, and inhospitable environment, yet the deep ocean and seafloor are crucial to our lives through the services that they provide. Our understanding of how the deep sea functions remains limited, but when treated synoptically, a diversity of supporting, provisioning, regulating and cultural services becomes apparent. The biological pump transports carbon from the atmosphere into deep-ocean water masses that are separated over prolonged periods, reducing the impact of anthropogenic carbon release. Microbial oxidation of methane keeps another potent greenhouse gas out of the atmosphere while trapping carbon in authigenic carbonates. Nutrient regeneration by all faunal size classes provides the elements necessary for fueling surface productivity and fisheries, and microbial processes detoxify a diversity of compounds. Each of these processes occur on a very small scale, yet considering the vast area over which they occur they become important for the global functioning of the ocean. The deep sea also provides a wealth of resources, including fish stocks, enormous bioprospecting potential, and elements and energy reserves that are currently being extracted and will be increasingly important in the near future. Society benefits from the intrigue and mystery, the strange life forms, and the great unknown that has acted as a muse for inspiration and imagination since near the beginning of civilization. While many functions occur on the scale of microns to meters and timescales up to years, the derived services that result are only useful after centuries of integrated activity. This vast dark habitat, which covers the majority of the globe, harbors processes that directly impact humans in a variety of ways; however, the same traits that differentiate it from terrestrial or shallow marine systems also result in a greater need for integrated spatial and temporal understanding as it experiences increased use by society. In

  12. Advanced deep sea diving equipment

    NASA Technical Reports Server (NTRS)

    Danesi, W. A.

    1972-01-01

    Design requirements are generated for a deep sea heavy duty diving system to equip salvage divers with equipment and tools that permit work of the same quality and in times approaching that done on the surface. The system consists of a helmet, a recirculator for removing carbon dioxide, and the diver's dress. The diver controls the inlet flow by the recirculatory control valve and is able to change closed cycle operation to open cycle if malfunction occurs. Proper function of the scrubber in the recirculator minimizes temperature and humidity effects as it filters the returning air.

  13. Microplastic pollution in deep-sea sediments.

    PubMed

    Van Cauwenberghe, Lisbeth; Vanreusel, Ann; Mees, Jan; Janssen, Colin R

    2013-11-01

    Microplastics are small plastic particles (<1 mm) originating from the degradation of larger plastic debris. These microplastics have been accumulating in the marine environment for decades and have been detected throughout the water column and in sublittoral and beach sediments worldwide. However, up to now, it has never been established whether microplastic presence in sediments is limited to accumulation hot spots such as the continental shelf, or whether they are also present in deep-sea sediments. Here we show, for the first time ever, that microplastics have indeed reached the most remote of marine environments: the deep sea. We found plastic particles sized in the micrometre range in deep-sea sediments collected at four locations representing different deep-sea habitats ranging in depth from 1100 to 5000 m. Our results demonstrate that microplastic pollution has spread throughout the world's seas and oceans, into the remote and largely unknown deep sea.

  14. Exploring deep sea habitats for baseline characterization using NOAA Ship Okeanos Explorer

    NASA Astrophysics Data System (ADS)

    McKenna, L.; Cantwell, K. L.; Kennedy, B. R.; Lobecker, E.; Sowers, D.; Elliott, K.

    2015-12-01

    In 2015, NOAA Ship Okeanos Explorer, the only US federal ship dedicated to ocean exploration, systematically explored previously unknown deep sea ecosystems in the Caribbean and remote regions in the vicinity of the Hawaiian Islands. Initial characterization of these areas is essential in order to establish a baseline against which to assess potential future changes due to climate and anthropogenic change. In the Caribbean, over 37,500 sq km of previously unmapped seafloor were mapped with a high resolution multibeam revealing rugged canyons along shelf breaks, intricate incised channels, and complex tectonic features. 12 ROV dives, in the 300-6,000 m depth range, visually explored seamounts, escarpments, submarine canyons, and the water column revealing diverse ecosystems and habitats. Discoveries include large assemblages of deep sea corals, range extensions, and observations of several rare and potentially new organisms - including a seastar that had not been documented since its holotype specimen. In the Pacific, over 50,000 sq km of seafloor were mapped in high-resolution, revealing long linear ridge and tectonic fracture zone features, both peaked and flat-topped seamounts, and numerous features that appear to be volcanic in origin. To better understand ecosystem dynamics in depths greater than 2,000 m, the deepest ever ROV surveys and sampling were conducted in remote Pacific island marine sanctuaries and monuments. Novel observations include range extensions and exploration of dense deep sea coral and sponge habitat. Baseline habitat characterization was also conducted on seamounts within the Prime Crust Zone (PCZ), an area with the highest expected concentration of deep-sea minerals in the Pacific. The Hawaiian operations marked the first ever ROV sampling effort conducted onboard Okeanos, and several geological and biological samples are now available at museums and sample repositories in addition to all digital data available through the National

  15. Virtual Investigations of an Active Deep Sea Volcano

    NASA Astrophysics Data System (ADS)

    Sautter, L.; Taylor, M. M.; Fundis, A.; Kelley, D. S.; Elend, M.

    2013-12-01

    Axial Seamount, located on the Juan de Fuca spreading ridge 300 miles off the Oregon coast, is an active volcano whose summit caldera lies 1500 m beneath the sea surface. Ongoing construction of the Regional Scale Nodes (RSN) cabled observatory by the University of Washington (funded by the NSF Ocean Observatories Initiative) has allowed for exploration of recent lava flows and active hydrothermal vents using HD video mounted on the ROVs, ROPOS and JASON II. College level oceanography/marine geology online laboratory exercises referred to as Online Concept Modules (OCMs) have been created using video and video frame-captured mosaics to promote skill development for characterizing and quantifying deep sea environments. Students proceed at their own pace through a sequence of short movies with which they (a) gain background knowledge, (b) learn skills to identify and classify features or biota within a targeted environment, (c) practice these skills, and (d) use their knowledge and skills to make interpretations regarding the environment. Part (d) serves as the necessary assessment component of the laboratory exercise. Two Axial Seamount-focused OCMs will be presented: 1) Lava Flow Characterization: Identifying a Suitable Cable Route, and 2) Assessing Hydrothermal Vent Communities: Comparisons Among Multiple Sulfide Chimneys.

  16. Age, growth rates, and paleoclimate studies of deep sea corals

    USGS Publications Warehouse

    Prouty, Nancy G; Roark, E. Brendan; Andrews, Allen; Robinson, Laura; Hill, Tessa; Sherwood, Owen; Williams, Branwen; Guilderson, Thomas P.; Fallon, Stewart

    2015-01-01

    Deep-water corals are some of the slowest growing, longest-lived skeletal accreting marine organisms. These habitat-forming species support diverse faunal assemblages that include commercially and ecologically important organisms. Therefore, effective management and conservation strategies for deep-sea corals can be informed by precise and accurate age, growth rate, and lifespan characteristics for proper assessment of vulnerability and recovery from perturbations. This is especially true for the small number of commercially valuable, and potentially endangered, species that are part of the black and precious coral fisheries (Tsounis et al. 2010). In addition to evaluating time scales of recovery from disturbance or exploitation, accurate age and growth estimates are essential for understanding the life history and ecology of these habitat-forming corals. Given that longevity is a key factor for population maintenance and fishery sustainability, partly due to limited and complex genetic flow among coral populations separated by great distances, accurate age structure for these deep-sea coral communities is essential for proper, long-term resource management.

  17. Temperature Impacts on Deep-Sea Biodiversity

    NASA Astrophysics Data System (ADS)

    Yasuhara, M.; Danovaro, R.

    2015-12-01

    Temperature is considered to be a fundamental factor controlling biodiversity in marine ecosystems, but precisely what role temperature plays in modulating diversity is still not clear. The deep ocean, lacking light and in situ photosynthetic primary production, is an ideal model system to test the effects of temperature changes on biodiversity. Here we synthesize current knowledge on temperature-diversity relationships in the deep sea. Our results from both present and past deep-sea assemblages suggest that, when a wide range of deep-sea bottom-water temperatures is considered, a unimodal relationship exists between temperature and diversity (that may be right skewed). It is possible that temperature is important only when at relatively high and low levels but does not play a major role in the intermediate temperature range. Possible mechanisms explaining the temperature-biodiversity relationship include the physiological-tolerance hypothesis, the metabolic hypothesis, island biogeography theory, or some combination of these. The possible unimodal relationship discussed here may allow us to identify tipping points at which on-going global change and deep-water warming may increase or decrease deep-sea biodiversity. Predicted changes in deep-sea temperatures due to human-induced climate change may have more adverse consequences than expected considering the sensitivity of deep-sea ecosystems to temperature changes.

  18. Temperature impacts on deep-sea biodiversity.

    PubMed

    Yasuhara, Moriaki; Danovaro, Roberto

    2016-05-01

    Temperature is considered to be a fundamental factor controlling biodiversity in marine ecosystems, but precisely what role temperature plays in modulating diversity is still not clear. The deep ocean, lacking light and in situ photosynthetic primary production, is an ideal model system to test the effects of temperature changes on biodiversity. Here we synthesize current knowledge on temperature-diversity relationships in the deep sea. Our results from both present and past deep-sea assemblages suggest that, when a wide range of deep-sea bottom-water temperatures is considered, a unimodal relationship exists between temperature and diversity (that may be right skewed). It is possible that temperature is important only when at relatively high and low levels but does not play a major role in the intermediate temperature range. Possible mechanisms explaining the temperature-biodiversity relationship include the physiological-tolerance hypothesis, the metabolic hypothesis, island biogeography theory, or some combination of these. The possible unimodal relationship discussed here may allow us to identify tipping points at which on-going global change and deep-water warming may increase or decrease deep-sea biodiversity. Predicted changes in deep-sea temperatures due to human-induced climate change may have more adverse consequences than expected considering the sensitivity of deep-sea ecosystems to temperature changes.

  19. 47 CFR 32.2424 - Submarine & deep sea cable.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 2 2010-10-01 2010-10-01 false Submarine & deep sea cable. 32.2424 Section 32... Submarine & deep sea cable. (a) This account shall include the original cost of submarine cable and deep sea... defined below, are to be maintained for nonmetallic submarine and deep sea cable and metallic...

  20. 47 CFR 32.2424 - Submarine & deep sea cable.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 2 2014-10-01 2014-10-01 false Submarine & deep sea cable. 32.2424 Section 32... Submarine & deep sea cable. (a) This account shall include the original cost of submarine cable and deep sea... defined below, are to be maintained for nonmetallic submarine and deep sea cable and metallic...

  1. 47 CFR 32.2424 - Submarine & deep sea cable.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 47 Telecommunication 2 2013-10-01 2013-10-01 false Submarine & deep sea cable. 32.2424 Section 32... Submarine & deep sea cable. (a) This account shall include the original cost of submarine cable and deep sea... defined below, are to be maintained for nonmetallic submarine and deep sea cable and metallic...

  2. 47 CFR 32.2424 - Submarine & deep sea cable.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 47 Telecommunication 2 2012-10-01 2012-10-01 false Submarine & deep sea cable. 32.2424 Section 32... Submarine & deep sea cable. (a) This account shall include the original cost of submarine cable and deep sea... defined below, are to be maintained for nonmetallic submarine and deep sea cable and metallic...

  3. 47 CFR 32.2424 - Submarine & deep sea cable.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 47 Telecommunication 2 2011-10-01 2011-10-01 false Submarine & deep sea cable. 32.2424 Section 32... Submarine & deep sea cable. (a) This account shall include the original cost of submarine cable and deep sea... defined below, are to be maintained for nonmetallic submarine and deep sea cable and metallic...

  4. Identification of new deep sea sinuous channels in the eastern Arabian Sea.

    PubMed

    Mishra, Ravi; Pandey, D K; Ramesh, Prerna; Clift, Peter D

    2016-01-01

    Deep sea channel systems are recognized in most submarine fans worldwide as well as in the geological record. The Indus Fan is the second largest modern submarine fan, having a well-developed active canyon and deep sea channel system. Previous studies from the upper Indus Fan have reported several active channel systems. In the present study, deep sea channel systems were identified within the middle Indus Fan using high resolution multibeam bathymetric data. Prominent morphological features within the survey block include the Raman Seamount and Laxmi Ridge. The origin of the newly discovered channels in the middle fan has been inferred using medium resolution satellite bathymetry data. Interpretation of new data shows that the highly sinuous deep sea channel systems also extend to the east of Laxmi Ridge, as well as to the west of Laxmi Ridge, as previously reported. A decrease in sinuosity southward can be attributed to the morphological constraints imposed by the elevated features. These findings have significance in determining the pathways for active sediment transport systems, as well as their source characterization. The geometry suggests a series of punctuated avulsion events leading to the present array of disconnected channels. Such channels have affected the Laxmi Basin since the Pliocene and are responsible for reworking older fan sediments, resulting in loss of the original erosional signature supplied from the river mouth. This implies that distal fan sediments have experienced significant signal shredding and may not represent the erosion and weathering conditions within the onshore basin at the time of sedimentation.

  5. From principles to practice: a spatial approach to systematic conservation planning in the deep sea

    PubMed Central

    Wedding, L. M.; Friedlander, A. M.; Kittinger, J. N.; Watling, L.; Gaines, S. D.; Bennett, M.; Hardy, S. M.; Smith, C. R.

    2013-01-01

    Increases in the demand and price for industrial metals, combined with advances in technological capabilities have now made deep-sea mining more feasible and economically viable. In order to balance economic interests with the conservation of abyssal plain ecosystems, it is becoming increasingly important to develop a systematic approach to spatial management and zoning of the deep sea. Here, we describe an expert-driven systematic conservation planning process applied to inform science-based recommendations to the International Seabed Authority for a system of deep-sea marine protected areas (MPAs) to safeguard biodiversity and ecosystem function in an abyssal Pacific region targeted for nodule mining (e.g. the Clarion–Clipperton fracture zone, CCZ). Our use of geospatial analysis and expert opinion in forming the recommendations allowed us to stratify the proposed network by biophysical gradients, maximize the number of biologically unique seamounts within each subregion, and minimize socioeconomic impacts. The resulting proposal for an MPA network (nine replicate 400 × 400 km MPAs) covers 24% (1 440 000 km2) of the total CCZ planning region and serves as example of swift and pre-emptive conservation planning across an unprecedented area in the deep sea. As pressure from resource extraction increases in the future, the scientific guiding principles outlined in this research can serve as a basis for collaborative international approaches to ocean management. PMID:24197407

  6. From principles to practice: a spatial approach to systematic conservation planning in the deep sea.

    PubMed

    Wedding, L M; Friedlander, A M; Kittinger, J N; Watling, L; Gaines, S D; Bennett, M; Hardy, S M; Smith, C R

    2013-12-22

    Increases in the demand and price for industrial metals, combined with advances in technological capabilities have now made deep-sea mining more feasible and economically viable. In order to balance economic interests with the conservation of abyssal plain ecosystems, it is becoming increasingly important to develop a systematic approach to spatial management and zoning of the deep sea. Here, we describe an expert-driven systematic conservation planning process applied to inform science-based recommendations to the International Seabed Authority for a system of deep-sea marine protected areas (MPAs) to safeguard biodiversity and ecosystem function in an abyssal Pacific region targeted for nodule mining (e.g. the Clarion-Clipperton fracture zone, CCZ). Our use of geospatial analysis and expert opinion in forming the recommendations allowed us to stratify the proposed network by biophysical gradients, maximize the number of biologically unique seamounts within each subregion, and minimize socioeconomic impacts. The resulting proposal for an MPA network (nine replicate 400 × 400 km MPAs) covers 24% (1 440 000 km(2)) of the total CCZ planning region and serves as example of swift and pre-emptive conservation planning across an unprecedented area in the deep sea. As pressure from resource extraction increases in the future, the scientific guiding principles outlined in this research can serve as a basis for collaborative international approaches to ocean management.

  7. Vertical migrations of a deep-sea fish and its prey.

    PubMed

    Afonso, Pedro; McGinty, Niall; Graça, Gonçalo; Fontes, Jorge; Inácio, Mónica; Totland, Atle; Menezes, Gui

    2014-01-01

    It has been speculated that some deep-sea fishes can display large vertical migrations and likely doing so to explore the full suite of benthopelagic food resources, especially the pelagic organisms of the deep scattering layer (DSL). This would help explain the success of fishes residing at seamounts and the increased biodiversity found in these features of the open ocean. We combined active plus passive acoustic telemetry of blackspot seabream with in situ environmental and biological (backscattering) data collection at a seamount to verify if its behaviour is dominated by vertical movements as a response to temporal changes in environmental conditions and pelagic prey availability. We found that seabream extensively migrate up and down the water column, that these patterns are cyclic both in short-term (tidal, diel) as well as long-term (seasonal) scales, and that they partially match the availability of potential DSL prey components. Furthermore, the emerging pattern points to a more complex spatial behaviour than previously anticipated, suggesting a seasonal switch in the diel behaviour mode (benthic vs. pelagic) of seabream, which may reflect an adaptation to differences in prey availability. This study is the first to document the fine scale three-dimensional behaviour of a deep-sea fish residing at seamounts.

  8. Vertical Migrations of a Deep-Sea Fish and Its Prey

    PubMed Central

    Afonso, Pedro; McGinty, Niall; Graça, Gonçalo; Fontes, Jorge; Inácio, Mónica; Totland, Atle; Menezes, Gui

    2014-01-01

    It has been speculated that some deep-sea fishes can display large vertical migrations and likely doing so to explore the full suite of benthopelagic food resources, especially the pelagic organisms of the deep scattering layer (DSL). This would help explain the success of fishes residing at seamounts and the increased biodiversity found in these features of the open ocean. We combined active plus passive acoustic telemetry of blackspot seabream with in situ environmental and biological (backscattering) data collection at a seamount to verify if its behaviour is dominated by vertical movements as a response to temporal changes in environmental conditions and pelagic prey availability. We found that seabream extensively migrate up and down the water column, that these patterns are cyclic both in short-term (tidal, diel) as well as long-term (seasonal) scales, and that they partially match the availability of potential DSL prey components. Furthermore, the emerging pattern points to a more complex spatial behaviour than previously anticipated, suggesting a seasonal switch in the diel behaviour mode (benthic vs. pelagic) of seabream, which may reflect an adaptation to differences in prey availability. This study is the first to document the fine scale three-dimensional behaviour of a deep-sea fish residing at seamounts. PMID:24859231

  9. Ecosystem function and services provided by the deep sea

    NASA Astrophysics Data System (ADS)

    Thurber, A. R.; Sweetman, A. K.; Narayanaswamy, B. E.; Jones, D. O. B.; Ingels, J.; Hansman, R. L.

    2013-11-01

    The deep sea is often viewed as a vast, dark, remote, and inhospitable environment, yet the deep ocean and seafloor are crucial to our lives through the services and provisions that they provide. Our understanding of how the deep sea functions remains limited, but when treated synoptically, a diversity of provisioning, regulating and cultural services become apparent. The biological pump transports carbon from the atmosphere into deep-ocean water masses which are separated over prolonged periods, reducing the impact of anthropogenic carbon release. Microbial oxidation of methane keeps another potent greenhouse gas out of the atmosphere while trapping carbon in authigenic carbonates. Nutrient regeneration by all faunal size classes provides the elements necessary to fuel surface productivity and fisheries, and microbial processes detoxify a diversity of compounds. Each of these processes occur on a very small scale, yet considering the vast area over which they occur they become important for the global functioning of the ocean. The deep sea also provides a diversity of resources, including fish stocks, enormous bioprospecting potential, and elements and energy reserves that are currently being extracted and will be increasingly important in the near future. Society benefits from the intrigue and mystery, the strange life forms, and the great unknown which has acted as a muse for inspiration and imagination since near the beginning of civilization. While many functions occur on the scale of microns to meters and time scales up to years, the derived services that result are only useful after centuries of integrated activity. This vast dark habitat, that covers the majority of the globe, harbors processes that directly impact humans in a diversity of ways, however the same traits that differentiate it from terrestrial or shallow marine systems also result in a greater need for integrated spatial and temporal understanding as it experiences increased use by society.

  10. Deep-Sea Biodiversity in the Mediterranean Sea: The Known, the Unknown, and the Unknowable

    PubMed Central

    Danovaro, Roberto; Company, Joan Batista; Corinaldesi, Cinzia; D'Onghia, Gianfranco; Galil, Bella; Gambi, Cristina; Gooday, Andrew J.; Lampadariou, Nikolaos; Luna, Gian Marco; Morigi, Caterina; Olu, Karine; Polymenakou, Paraskevi; Ramirez-Llodra, Eva; Sabbatini, Anna; Sardà, Francesc; Sibuet, Myriam; Tselepides, Anastasios

    2010-01-01

    Deep-sea ecosystems represent the largest biome of the global biosphere, but knowledge of their biodiversity is still scant. The Mediterranean basin has been proposed as a hot spot of terrestrial and coastal marine biodiversity but has been supposed to be impoverished of deep-sea species richness. We summarized all available information on benthic biodiversity (Prokaryotes, Foraminifera, Meiofauna, Macrofauna, and Megafauna) in different deep-sea ecosystems of the Mediterranean Sea (200 to more than 4,000 m depth), including open slopes, deep basins, canyons, cold seeps, seamounts, deep-water corals and deep-hypersaline anoxic basins and analyzed overall longitudinal and bathymetric patterns. We show that in contrast to what was expected from the sharp decrease in organic carbon fluxes and reduced faunal abundance, the deep-sea biodiversity of both the eastern and the western basins of the Mediterranean Sea is similarly high. All of the biodiversity components, except Bacteria and Archaea, displayed a decreasing pattern with increasing water depth, but to a different extent for each component. Unlike patterns observed for faunal abundance, highest negative values of the slopes of the biodiversity patterns were observed for Meiofauna, followed by Macrofauna and Megafauna. Comparison of the biodiversity associated with open slopes, deep basins, canyons, and deep-water corals showed that the deep basins were the least diverse. Rarefaction curves allowed us to estimate the expected number of species for each benthic component in different bathymetric ranges. A large fraction of exclusive species was associated with each specific habitat or ecosystem. Thus, each deep-sea ecosystem contributes significantly to overall biodiversity. From theoretical extrapolations we estimate that the overall deep-sea Mediterranean biodiversity (excluding prokaryotes) reaches approximately 2805 species of which about 66% is still undiscovered. Among the biotic components investigated

  11. Deep-sea biodiversity in the Mediterranean Sea: the known, the unknown, and the unknowable.

    PubMed

    Danovaro, Roberto; Company, Joan Batista; Corinaldesi, Cinzia; D'Onghia, Gianfranco; Galil, Bella; Gambi, Cristina; Gooday, Andrew J; Lampadariou, Nikolaos; Luna, Gian Marco; Morigi, Caterina; Olu, Karine; Polymenakou, Paraskevi; Ramirez-Llodra, Eva; Sabbatini, Anna; Sardà, Francesc; Sibuet, Myriam; Tselepides, Anastasios

    2010-08-02

    Deep-sea ecosystems represent the largest biome of the global biosphere, but knowledge of their biodiversity is still scant. The Mediterranean basin has been proposed as a hot spot of terrestrial and coastal marine biodiversity but has been supposed to be impoverished of deep-sea species richness. We summarized all available information on benthic biodiversity (Prokaryotes, Foraminifera, Meiofauna, Macrofauna, and Megafauna) in different deep-sea ecosystems of the Mediterranean Sea (200 to more than 4,000 m depth), including open slopes, deep basins, canyons, cold seeps, seamounts, deep-water corals and deep-hypersaline anoxic basins and analyzed overall longitudinal and bathymetric patterns. We show that in contrast to what was expected from the sharp decrease in organic carbon fluxes and reduced faunal abundance, the deep-sea biodiversity of both the eastern and the western basins of the Mediterranean Sea is similarly high. All of the biodiversity components, except Bacteria and Archaea, displayed a decreasing pattern with increasing water depth, but to a different extent for each component. Unlike patterns observed for faunal abundance, highest negative values of the slopes of the biodiversity patterns were observed for Meiofauna, followed by Macrofauna and Megafauna. Comparison of the biodiversity associated with open slopes, deep basins, canyons, and deep-water corals showed that the deep basins were the least diverse. Rarefaction curves allowed us to estimate the expected number of species for each benthic component in different bathymetric ranges. A large fraction of exclusive species was associated with each specific habitat or ecosystem. Thus, each deep-sea ecosystem contributes significantly to overall biodiversity. From theoretical extrapolations we estimate that the overall deep-sea Mediterranean biodiversity (excluding prokaryotes) reaches approximately 2805 species of which about 66% is still undiscovered. Among the biotic components investigated

  12. In Brief: Deep-sea observatory

    NASA Astrophysics Data System (ADS)

    Showstack, Randy

    2008-11-01

    The first deep-sea ocean observatory offshore of the continental United States has begun operating in the waters off central California. The remotely operated Monterey Accelerated Research System (MARS) will allow scientists to monitor the deep sea continuously. Among the first devices to be hooked up to the observatory are instruments to monitor earthquakes, videotape deep-sea animals, and study the effects of acidification on seafloor animals. ``Some day we may look back at the first packets of data streaming in from the MARS observatory as the equivalent of those first words spoken by Alexander Graham Bell: `Watson, come here, I need you!','' commented Marcia McNutt, president and CEO of the Monterey Bay Aquarium Research Institute, which coordinated construction of the observatory. For more information, see http://www.mbari.org/news/news_releases/2008/mars-live/mars-live.html.

  13. Measurement of light scattering in deep sea

    NASA Astrophysics Data System (ADS)

    Maragos, N.; Balasi, K.; Domvoglou, T.; Kiskiras, I.; Lenis, D.; Maniatis, M.; Stavropoulos, G.

    2016-04-01

    The deep-sea neutrino telescope in the Mediterranean Sea, being prepared by the KM3NET collaboration, will contain thousands of optical sensors to readout. The accurate knowledge of the optical properties of deep-sea water is of great importance for the neutrino event reconstruction process. In this study we describe our progress in designing an experimental setup and studying a method to measure the parameters describing the absorption and scattering characteristics of deep-sea water. Three PMTs will be used to measure in situ the scattered light emitted from six laser diodes in three different wavelengths covering the Cherenkov radiation spectrum. The technique for the evaluation of the parameters is based on Monte Carlo simulations and our results show that we are able to determine these parameters with satisfying precision.

  14. The study of deep-sea cephalopods.

    PubMed

    Hoving, Henk-Jan T; Perez, Jose Angel A; Bolstad, Kathrin S R; Braid, Heather E; Evans, Aaron B; Fuchs, Dirk; Judkins, Heather; Kelly, Jesse T; Marian, José E A R; Nakajima, Ryuta; Piatkowski, Uwe; Reid, Amanda; Vecchione, Michael; Xavier, José C C

    2014-01-01

    "Deep-sea" cephalopods are here defined as cephalopods that spend a significant part of their life cycles outside the euphotic zone. In this chapter, the state of knowledge in several aspects of deep-sea cephalopod research are summarized, including information sources for these animals, diversity and general biogeography and life cycles, including reproduction. Recommendations are made for addressing some of the remaining knowledge deficiencies using a variety of traditional and more recently developed methods. The types of oceanic gear that are suitable for collecting cephalopod specimens and images are reviewed. Many groups of deep-sea cephalopods require taxonomic reviews, ideally based on both morphological and molecular characters. Museum collections play a vital role in these revisions, and novel (molecular) techniques may facilitate new use of old museum specimens. Fundamental life-cycle parameters remain unknown for many species; techniques developed for neritic species that could potentially be applied to deep-sea cephalopods are discussed. Reproductive tactics and strategies in deep-sea cephalopods are very diverse and call for comparative evolutionary and experimental studies, but even in the twenty-first century, mature individuals are still unknown for many species. New insights into diet and trophic position have begun to reveal a more diverse range of feeding strategies than the typically voracious predatory lifestyle known for many cephalopods. Regular standardized deep-sea cephalopod surveys are necessary to provide insight into temporal changes in oceanic cephalopod populations and to forecast, verify and monitor the impacts of global marine changes and human impacts on these populations.

  15. 50 CFR 660.212 - Fixed gear fishery-prohibitions.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ..., subpart C): Thompson Seamount, President Jackson Seamount, Cordell Bank (50-fm (91-m) isobath), Harris... Davidson Seamount area (defined in § 660.75, subpart C). (d) Sablefish fisheries. (1) Take, retain,...

  16. 50 CFR 660.212 - Fixed gear fishery-prohibitions.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ..., subpart C): Thompson Seamount, President Jackson Seamount, Cordell Bank (50-fm (91-m) isobath), Harris... Davidson Seamount area (defined in § 660.75, subpart C). (d) Sablefish fisheries. (1) Take, retain,...

  17. 50 CFR 660.212 - Fixed gear fishery-prohibitions.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ..., subpart C): Thompson Seamount, President Jackson Seamount, Cordell Bank (50-fm (91-m) isobath), Harris... Davidson Seamount area (defined in § 660.75, subpart C). (d) Sablefish fisheries. (1) Take, retain,...

  18. 50 CFR 660.212 - Fixed gear fishery-prohibitions.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ..., subpart C): Thompson Seamount, President Jackson Seamount, Cordell Bank (50-fm (91-m) isobath), Harris... Davidson Seamount area (defined in § 660.75, subpart C). (d) Sablefish fisheries. (1) Take, retain,...

  19. Diversity and endemism of the benthic seamount fauna in the southwest Pacific.

    PubMed

    de Forges, B R; Koslow, J A; Poore, G C

    2000-06-22

    Seamounts comprise a unique deep-sea environment, characterized by substantially enhanced currents and a fauna that is dominated by suspension feeders, such as corals. The potential importance of these steep-sided undersea mountains, which are generally of volcanic origin, to ocean biogeography and diversity was recognized over 40 years ago, but this environment has remained very poorly explored. A review of seamount biota and biogeography reported a total of 597 invertebrate species recorded from seamounts worldwide since the Challenger expedition of 1872. Most reports, based on a single taxonomic group, were extremely limited: 5 seamounts of the estimated more than 30,000 seamounts in the world's oceans accounted for 72% of the species recorded. Only 15% of the species occurring on seamounts were considered potential seamount endemics. Here we report the discovery of more than 850 macro- and megafaunal species from seamounts in the Tasman Sea and southeast Coral Sea, of which 29-34% are new to science and potential seamount endemics. Low species overlap between seamounts in different portions of the region indicates that the seamounts in clusters or along ridge systems function as 'island groups' or 'chains' leading to highly localized species distributions and apparent speciation between groups or ridge systems that is exceptional for the deep sea. These results have substantial implications for the conservation of this fauna, which is threatened by fishing activity.

  20. Experimental investigation of deep sea riser interaction

    SciTech Connect

    Huse, E.

    1996-12-31

    In future deep sea field developments the drag force and corresponding static deflections of the risers due to current can become quite large. The prevention of mechanical contact (collision) between the risers will need more careful evaluation than in moderate water depths. The paper describes a series of model experiments in a Norwegian fjord to determine criteria for on-set of collisions between the risers of a deep sea TLP. The current was modeled using the natural tidal current in the fjord. Results from the tests are summarized and used for verification of numerical calculations of collision criteria.

  1. 76 FR 46719 - Western Pacific Bottomfish and Seamount Groundfish Fisheries; 2011-12 Main Hawaiian Islands Deep...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-03

    ... long-term sustainability of Hawaii bottomfish. DATES: Comments must be received by August 18, 2011... the most recent bottomfish stock assessment, risk of overfishing, past fishery performance... is based on a 2010 stock assessment that indicated that the MHI Deep 7 bottomfish were not...

  2. From nanoparticles via microtemplates and milliparticles to deep-sea nodules: biogenically driven mineral formation

    NASA Astrophysics Data System (ADS)

    Wang, Xiao-Hong; Schloßmacher, Ute; Wang, Shun-Feng; Schröder, Heinz C.; Wiens, Matthias; Batel, Renato; Müller, Werner E. G.

    2012-06-01

    Deep-sea minerals in polymetallic nodules and seamount Co-rich crusts are not only formed by mineralization but also by biologically driven processes involving microorganisms (biomineralization). Within the polymetallic nodules, free-living and biofilm-forming bacteria provide the matrix for manganese deposition, and in seamount Co-rich crusts, coccolithophores represent the dominant organisms that act as bio-seeds for an initial manganese deposition. These (bio)minerals are economically important: manganese is an important alloying component and cobalt forms part of special steels in addition to being used, along with other rare metals, in plasma screens, hard-disk magnets and hybrid car motors. Recent progress in our understanding of the participation of the organic matrices in the enrichment of these metals might provide the basis for feasibility studies of biotechnological applications.

  3. Colonization of the deep sea by fishes

    PubMed Central

    Priede, I G; Froese, R

    2013-01-01

    Analysis of maximum depth of occurrence of 11 952 marine fish species shows a global decrease in species number (N) with depth (x; m): log10N = −0·000422x + 3·610000 (r2 = 0·948). The rate of decrease is close to global estimates for change in pelagic and benthic biomass with depth (−0·000430), indicating that species richness of fishes may be limited by food energy availability in the deep sea. The slopes for the Classes Myxini (−0·000488) and Actinopterygii (−0·000413) follow this trend but Chondrichthyes decrease more rapidly (−0·000731) implying deficiency in ability to colonize the deep sea. Maximum depths attained are 2743, 4156 and 8370 m for Myxini, Chondrichthyes and Actinopterygii, respectively. Endemic species occur in abundance at 7–7800 m depth in hadal trenches but appear to be absent from the deepest parts of the oceans, >9000 m deep. There have been six global oceanic anoxic events (OAE) since the origin of the major fish taxa in the Devonian c. 400 million years ago (mya). Colonization of the deep sea has taken place largely since the most recent OAE in the Cretaceous 94 mya when the Atlantic Ocean opened up. Patterns of global oceanic circulation oxygenating the deep ocean basins became established coinciding with a period of teleost diversification and appearance of the Acanthopterygii. Within the Actinopterygii, there is a trend for greater invasion of the deep sea by the lower taxa in accordance with the Andriashev paradigm. Here, 31 deep-sea families of Actinopterygii were identified with mean maximum depth >1000 m and with >10 species. Those with most of their constituent species living shallower than 1000 m are proposed as invasive, with extinctions in the deep being continuously balanced by export of species from shallow seas. Specialized families with most species deeper than 1000 m are termed deep-sea endemics in this study; these appear to persist in the deep by virtue of global distribution enabling

  4. Colonization of the deep sea by fishes.

    PubMed

    Priede, I G; Froese, R

    2013-12-01

    Analysis of maximum depth of occurrence of 11 952 marine fish species shows a global decrease in species number (N) with depth (x; m): log10 N = -0·000422x + 3·610000 (r(2)  = 0·948). The rate of decrease is close to global estimates for change in pelagic and benthic biomass with depth (-0·000430), indicating that species richness of fishes may be limited by food energy availability in the deep sea. The slopes for the Classes Myxini (-0·000488) and Actinopterygii (-0·000413) follow this trend but Chondrichthyes decrease more rapidly (-0·000731) implying deficiency in ability to colonize the deep sea. Maximum depths attained are 2743, 4156 and 8370 m for Myxini, Chondrichthyes and Actinopterygii, respectively. Endemic species occur in abundance at 7-7800 m depth in hadal trenches but appear to be absent from the deepest parts of the oceans, >9000 m deep. There have been six global oceanic anoxic events (OAE) since the origin of the major fish taxa in the Devonian c. 400 million years ago (mya). Colonization of the deep sea has taken place largely since the most recent OAE in the Cretaceous 94 mya when the Atlantic Ocean opened up. Patterns of global oceanic circulation oxygenating the deep ocean basins became established coinciding with a period of teleost diversification and appearance of the Acanthopterygii. Within the Actinopterygii, there is a trend for greater invasion of the deep sea by the lower taxa in accordance with the Andriashev paradigm. Here, 31 deep-sea families of Actinopterygii were identified with mean maximum depth >1000 m and with >10 species. Those with most of their constituent species living shallower than 1000 m are proposed as invasive, with extinctions in the deep being continuously balanced by export of species from shallow seas. Specialized families with most species deeper than 1000 m are termed deep-sea endemics in this study; these appear to persist in the deep by virtue of global distribution enabling recovery

  5. Autonomous, Retrievable, Deep Sea Microbial Fuel Cell

    NASA Astrophysics Data System (ADS)

    Richter, K.

    2014-12-01

    Microbial fuel cells (MFCs) work by providing bacteria in anaerobic sediments with an electron acceptor (anode) that stimulates metabolism of organic matter. The buried anode is connected via control circuitry to a cathode exposed to oxygen in the overlying water. During metabolism, bacteria release hydrogen ions into the sediment and transfer electrons extra-cellularly to the anode, which eventually reduce dissolved oxygen at the cathode, forming water. The open circuit voltage is approximately 0.8 v. The voltage between electrodes is operationally kept at 0.4 v with a potentiastat. The current is chiefly limited by the rate of microbial metabolism at the anode. The Office of Naval Research has encouraged development of microbial fuel cells in the marine environment at a number of academic and naval institutions. Earlier work in shallow sediments of San Diego Bay showed that the most important environmental parameters that control fuel cell power output in San Diego Bay were total organic carbon in the sediment and seasonal water temperature. Current MFC work at SPAWAR includes extension of microbial fuel cell tests to the deep sea environment (>1000 m) and, in parallel, testing microbial fuel cells in the laboratory under deep sea conditions. One question we are asking is whether MFC power output from deep water sediments repressurized and chilled in the laboratory comparable to those measured in situ. If yes, mapping the power potential of deep sea sediments may be made much easier, requiring sediment grabs and lab tests rather than deployment and retrieval of fuel cells. Another question we are asking is whether in situ temperature and total organic carbon in the deep sea sediment can predict MFC power. If yes, then we can make use of the large collection of publicly available, deep sea oceanographic measurements to make these predictions, foregoing expensive work at sea. These regressions will be compared to those derived from shallow water measurements.

  6. Mass extinctions in the deep sea

    NASA Technical Reports Server (NTRS)

    Thomas, E.

    1988-01-01

    The character of mass extinctions can be assessed by studying extinction patterns of organisms, the fabric of the extinction, and assessing the environmental niche and mode of life of survivors. Deep-sea benthic foraminifera have been listed as little affected by the Cretaceous-Tertiary (K-T) mass extinction, but very few quantitative data are available. New data on deep-sea Late Maestrichtian-Eocene benthic foraminifera from Maud Rise (Antractica) indicate that about 10 percent of the species living at depths of 2000 to 2500 m had last appearances within 1 my of the Cretaceous-Tertiary (K-T) boundary, versus about 25 percent of species at 1000 to 1500 m. Many survivors from the Cretaceous became extinct in a period of global deep-sea benthic foraminiferal extinction at the end of the Paleocene, a time otherwise marked by very few extinctions. Preliminary conclusions suggest that the deep oceanic environment is essentially decoupled from the shallow marine and terrestrial environment, and that even major disturbances of one of these will not greatly affect the other. This gives deep-sea benthic faunas a good opportunity to recolonize shallow environments from greater depths and vice versa after massive extinctions. The decoupling means that data on deep-sea benthic boundary was caused by the environmental effects of asteriod impact or excessive volcanism. The benthic foraminiferal data strongly suggest, however, that the environmental results were strongest at the Earth's surface, and that there was no major disturbance of the deep ocean; this pattern might result both from excessive volcanism and from an impact on land.

  7. Submarine canyons: hotspots of benthic biomass and productivity in the deep sea.

    PubMed

    De Leo, Fabio C; Smith, Craig R; Rowden, Ashley A; Bowden, David A; Clark, Malcolm R

    2010-09-22

    Submarine canyons are dramatic and widespread topographic features crossing continental and island margins in all oceans. Canyons can be sites of enhanced organic-matter flux and deposition through entrainment of coastal detrital export, dense shelf-water cascade, channelling of resuspended particulate material and focusing of sediment deposition. Despite their unusual ecological characteristics and global distribution along oceanic continental margins, only scattered information is available about the influence of submarine canyons on deep-sea ecosystem structure and productivity. Here, we show that deep-sea canyons such as the Kaikoura Canyon on the eastern New Zealand margin (42 degrees 01' S, 173 degrees 03' E) can sustain enormous biomasses of infaunal megabenthic invertebrates over large areas. Our reported biomass values are 100-fold higher than those previously reported for deep-sea (non-chemosynthetic) habitats below 500 m in the ocean. We also present evidence from deep-sea-towed camera images that areas in the canyon that have the extraordinary benthic biomass also harbour high abundances of macrourid (rattail) fishes likely to be feeding on the macro- and megabenthos. Bottom-trawl catch data also indicate that the Kaikoura Canyon has dramatically higher abundances of benthic-feeding fishes than adjacent slopes. Our results demonstrate that the Kaikoura Canyon is one of the most productive habitats described so far in the deep sea. A new global inventory suggests there are at least 660 submarine canyons worldwide, approximately 100 of which could be biomass hotspots similar to the Kaikoura Canyon. The importance of such deep-sea canyons as potential hotspots of production and commercial fisheries yields merits substantial further study.

  8. Submarine canyons: hotspots of benthic biomass and productivity in the deep sea

    PubMed Central

    De Leo, Fabio C.; Smith, Craig R.; Rowden, Ashley A.; Bowden, David A.; Clark, Malcolm R.

    2010-01-01

    Submarine canyons are dramatic and widespread topographic features crossing continental and island margins in all oceans. Canyons can be sites of enhanced organic-matter flux and deposition through entrainment of coastal detrital export, dense shelf-water cascade, channelling of resuspended particulate material and focusing of sediment deposition. Despite their unusual ecological characteristics and global distribution along oceanic continental margins, only scattered information is available about the influence of submarine canyons on deep-sea ecosystem structure and productivity. Here, we show that deep-sea canyons such as the Kaikoura Canyon on the eastern New Zealand margin (42°01′ S, 173°03′ E) can sustain enormous biomasses of infaunal megabenthic invertebrates over large areas. Our reported biomass values are 100-fold higher than those previously reported for deep-sea (non-chemosynthetic) habitats below 500 m in the ocean. We also present evidence from deep-sea-towed camera images that areas in the canyon that have the extraordinary benthic biomass also harbour high abundances of macrourid (rattail) fishes likely to be feeding on the macro- and megabenthos. Bottom-trawl catch data also indicate that the Kaikoura Canyon has dramatically higher abundances of benthic-feeding fishes than adjacent slopes. Our results demonstrate that the Kaikoura Canyon is one of the most productive habitats described so far in the deep sea. A new global inventory suggests there are at least 660 submarine canyons worldwide, approximately 100 of which could be biomass hotspots similar to the Kaikoura Canyon. The importance of such deep-sea canyons as potential hotspots of production and commercial fisheries yields merits substantial further study. PMID:20444722

  9. The past, present and future distribution of a deep-sea shrimp in the Southern Ocean

    PubMed Central

    Costello, Mark J.

    2016-01-01

    Shrimps have a widespread distribution across the shelf, slope and seamount regions of the Southern Ocean. Studies of Antarctic organisms have shown that individual species and higher taxa display different degrees of sensitivity and adaptability in response to environmental change. We use species distribution models to predict changes in the geographic range of the deep-sea Antarctic shrimp Nematocarcinus lanceopes under changing climatic conditions from the Last Glacial Maximum to the present and to the year 2100. The present distribution range indicates a pole-ward shift of the shrimp population since the last glaciation. This occurred by colonization of slopes from nearby refugia located around the northern part of Scotia Arc, southern tip of South America, South Georgia, Bouvet Island, southern tip of the Campbell plateau and Kerguelen plateau. By 2100, the shrimp are likely to expand their distribution in east Antarctica but have a continued pole-ward contraction in west Antarctica. The range extension and contraction process followed by the deep-sea shrimp provide a geographic context of how other deep-sea Antarctic species may have survived during the last glaciation and may endure with projected changing climatic conditions in the future. PMID:26925334

  10. Deep sea tides determination from GEOS-3

    NASA Technical Reports Server (NTRS)

    Maul, G. A.; Yanaway, A.

    1978-01-01

    GEOS 3 altimeter data in a 5 degree X 5 degree square centered at 30 deg N, 70 deg W were analyzed to evaluate deep sea tide determination from a spacecraft. The signal to noise ratio of known tidal variability to altimeter measurement of sea level above the ellipsoid was 0.1. A sample was obtained in a 5 deg x 5 deg area approximately once every four days. The randomly spaced time series was analyzed using two independent least squares techniques.

  11. Rapid change with depth in megabenthic structure-forming communities of the Makapu'u deep-sea coral bed

    NASA Astrophysics Data System (ADS)

    Long, Dustin J.; Baco, Amy R.

    2014-01-01

    Seamounts are largely unexplored undersea mountains rising abruptly from the ocean floor, which can support an increased abundance and diversity of organisms. Deep-sea corals are important benthic structure-formers on current-swept hard substrates in these habitats. While depth is emerging as a factor structuring the fauna of seamounts on a large spatial scale, most work addressing deep-sea coral and seamount community structure has not considered the role of small-scale variation in species distributions. Video from six ROV dives over a depth range of ~320-530 m were analyzed to assess the diversity and density of benthic megafaunal invertebrates across the Makapu'u deep-sea coral bed, offshore of Oahu, Hawaii. At the same time, the physical environment along the dive track was surveyed to relate biotic patterns with abiotic variables including depth, aspect, rugosity, substrate, slope and relief to test the factors structuring community assemblages. Despite the narrow range examined, depth was found to be the strongest structuring gradient, and six unique macrobenthic communities were found, with a 93% faunal dissimilarity over the depth surveyed. Relief, rugosity and slope were also factors in the final model. Alcyonacean octocorals were the dominant macrofaunal invertebrates at all but the deepest depth zone. The commercially harvested precious coral C. secundum was the dominant species at depths 370-470 m, with a distribution that is on average deeper than similar areas. This may be artificial due to the past harvesting of this species on the shallower portion of its range. Primnoid octocorals were the most abundant octocoral family overall. This work yields new insight on the spatial ecology of seamounts, pointing out that community changes can occur over narrow depth ranges and that communities can be structured by small-scale physiography.

  12. 50 CFR Table 22 to Part 679 - Alaska Seamount Habitat Protection Areas

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 11 2011-10-01 2011-10-01 false Alaska Seamount Habitat Protection Areas 22 Table 22 to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC... ZONE OFF ALASKA Pt. 679, Table 22 Table 22 to Part 679— Alaska Seamount Habitat Protection Areas...

  13. 50 CFR Table 22 to Part 679 - Alaska Seamount Habitat Protection Areas

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 50 Wildlife and Fisheries 13 2013-10-01 2013-10-01 false Alaska Seamount Habitat Protection Areas 22 Table 22 to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC... ZONE OFF ALASKA Pt. 679, Table 22 Table 22 to Part 679— Alaska Seamount Habitat Protection Areas...

  14. 50 CFR Table 22 to Part 679 - Alaska Seamount Habitat Protection Areas

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 50 Wildlife and Fisheries 9 2010-10-01 2010-10-01 false Alaska Seamount Habitat Protection Areas 22 Table 22 to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC... ZONE OFF ALASKA Pt. 679, Table 22 Table 22 to Part 679— Alaska Seamount Habitat Protection Areas...

  15. 50 CFR Table 22 to Part 679 - Alaska Seamount Habitat Protection Areas

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 13 2012-10-01 2012-10-01 false Alaska Seamount Habitat Protection Areas 22 Table 22 to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC... ZONE OFF ALASKA Pt. 679, Table 22 Table 22 to Part 679— Alaska Seamount Habitat Protection Areas...

  16. 50 CFR Table 22 to Part 679 - Alaska Seamount Habitat Protection Areas

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 50 Wildlife and Fisheries 13 2014-10-01 2014-10-01 false Alaska Seamount Habitat Protection Areas 22 Table 22 to Part 679 Wildlife and Fisheries FISHERY CONSERVATION AND MANAGEMENT, NATIONAL OCEANIC... ZONE OFF ALASKA Pt. 679, Table 22 Table 22 to Part 679— Alaska Seamount Habitat Protection Areas...

  17. 75 FR 51755 - New England Fishery Management Council; Public Hearing

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-23

    ... solicit comments on proposals to be included in the Draft Amendment 3 to the Deep Sea Red Crab Fishery... INFORMATION: The Council proposes to take action to amend the Deep Sea Red Crab Fishery Management Plan (FMP...-at-sea management system with a hard TAC; (5) eliminate trip limits; and (6) replace the...

  18. 76 FR 35408 - Essential Fish Habitat (EFH) Components of Fishery Management Plans (Northeast Multispecies...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-17

    ..., Atlantic Salmon, and Atlantic Deep-Sea Red Crab) 5- Year Review AGENCY: National Marine Fisheries Service..., monkfish, Atlantic herring, NE skate complex, Atlantic salmon, and Atlantic deep-sea red crab. The Council... minimizing the impacts of fishing on deep-sea corals. During early meetings to develop Phase 2...

  19. 78 FR 19216 - Mid-Atlantic Fishery Management Council (MAFMC); Public Meeting

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-03-29

    ... of the workshop is to facilitate development of spatial alternatives for deep sea coral protection... address the need for a refined set of deep sea coral protection area options for inclusion in Amendment 16 to the Mackerel, Squid, and Butterfish Fishery Management Plan (Protections for Deep Sea Corals)....

  20. A continuum of life histories in deep-sea demersal fishes

    NASA Astrophysics Data System (ADS)

    Drazen, Jeffrey C.; Haedrich, Richard L.

    2012-03-01

    It is generally perceived that all deep-sea fishes have great longevity, slow growth, and low reproductive output in comparison to shelf dwelling species. However, such a dichotomy is too simplistic because some fishes living on continental slopes are relatively fecund and fast growing, important considerations in respect to the management of expanding deep-sea fisheries. We tested two hypotheses that might explain variation in life history attributes of commercially exploited demersal fishes: (1) phylogeny best explains the differences because deep-sea species are often in different families from shelf dwelling ones and, alternatively, (2) environmental factors affecting individual life history attributes that change with depth account for the observed variation. Our analysis was based on 40 species from 9 orders, including all major commercially exploited deep-sea fishes and several phylogenetically related shelf species. Depth of occurrence correlated significantly with age at 50% maturity increasing linearly with depth (r2=0.46), while the von Bertalanffy growth coefficient, maximum fecundity and potential rate of population increase declined significantly and exponentially with depth (r2=0.41, 0.25 and 0.53, respectively). These trends were still significant when phylogenetically independent contrasts were applied. The trends were also consistent with similar slopes amongst members of the order Gadiformes and the order Scorpaeniformes. Reduced temperatures, predation pressure, food availability, or metabolic rates may all contribute to such changes with depth. Regardless of the mechanisms, by analyzing a suite of fishes from the shelves to the slope the present analysis has shown that rather than a simple dichotomy between deep-sea fishes and shelf fishes there is a continuum of life history attributes in fishes which correlate strongly with depth of occurrence.

  1. Tuna Longline Fishing around West and Central Pacific Seamounts

    PubMed Central

    Morato, Telmo; Hoyle, Simon D.; Allain, Valerie; Nicol, Simon J.

    2010-01-01

    Background Seamounts have been identified as aggregating locations for pelagic biodiversity including tuna; however the topography and prevailing oceanography differ between seamounts and not all are important for tuna. Although a relatively common feature in oceanic ecosystems, little information is available that identifies those that are biologically important. Improved knowledge offers opportunities for unique management of these areas, which may advance the sustainable management of oceanic resources. In this study, we evaluate the existence of an association between seamounts and tuna longline fisheries at the ocean basin scale, identify significant seamounts for tuna in the western and central Pacific Ocean, and quantify the seamount contribution to the tuna longline catch. Methodology/Principal Findings We use data collected for the Western and Central Pacific Ocean for bigeye, yellowfin, and albacore tuna at the ocean basin scale. GLMs were applied to a coupled dataset of longline fisheries catch and effort, and seamount location information. The analyses show that seamounts may be associated with an annual longline combined catch of 35 thousand tonnes, with higher catch apparent for yellowfin, bigeye, and albacore tuna on 17%, 14%, and 14% of seamounts respectively. In contrast 14%, 18%, and 20% of seamounts had significantly lower catches for yellowfin, bigeye and albacore tuna respectively. Studying catch data in relation to seamount positions presents several challenges such as bias in location of seamounts, or lack of spatial resolution of fisheries data. Whilst we recognize these limitations the criteria used for detecting significant seamounts were conservative and the error in identification is likely to be low albeit unknown. Conclusions/Significance Seamounts throughout the study area were found to either enhance or reduce tuna catch. This indicates that management of seamounts is important Pacific-wide, but management approaches must take

  2. Oxygen isotopes in deep-sea spherules

    NASA Technical Reports Server (NTRS)

    Clayton, Robert N.; Mayeda, Toshiko K.; Brownlee, Donald E.

    1986-01-01

    Oxygen isotopic compositions have been measured on several size fractions of deep-sea spherules of extraterrestrial origin. The silicate spherules have an isotopic composition unlike that of any known macrometeorite. Their pre-terrestrial compositions may have been similar to those of C3 chondrites or the anhydrous component of C2 chondrites, the latter being preferred on chemical grounds. Metallic particles oxidize in the upper atmosphere, and sample a region for which no previous oxygen isotope data exist. This part of the atmosphere, above about 100 km, is apparently strongly enriched in the heavy isotopes of oxygen.

  3. The National Deep-Sea Coral and Sponge Database: A Comprehensive Resource for United States Deep-Sea Coral and Sponge Records

    NASA Astrophysics Data System (ADS)

    Dornback, M.; Hourigan, T.; Etnoyer, P.; McGuinn, R.; Cross, S. L.

    2014-12-01

    Research on deep-sea corals has expanded rapidly over the last two decades, as scientists began to realize their value as long-lived structural components of high biodiversity habitats and archives of environmental information. The NOAA Deep Sea Coral Research and Technology Program's National Database for Deep-Sea Corals and Sponges is a comprehensive resource for georeferenced data on these organisms in U.S. waters. The National Database currently includes more than 220,000 deep-sea coral records representing approximately 880 unique species. Database records from museum archives, commercial and scientific bycatch, and from journal publications provide baseline information with relatively coarse spatial resolution dating back as far as 1842. These data are complemented by modern, in-situ submersible observations with high spatial resolution, from surveys conducted by NOAA and NOAA partners. Management of high volumes of modern high-resolution observational data can be challenging. NOAA is working with our data partners to incorporate this occurrence data into the National Database, along with images and associated information related to geoposition, time, biology, taxonomy, environment, provenance, and accuracy. NOAA is also working to link associated datasets collected by our program's research, to properly archive them to the NOAA National Data Centers, to build a robust metadata record, and to establish a standard protocol to simplify the process. Access to the National Database is provided through an online mapping portal. The map displays point based records from the database. Records can be refined by taxon, region, time, and depth. The queries and extent used to view the map can also be used to download subsets of the database. The database, map, and website is already in use by NOAA, regional fishery management councils, and regional ocean planning bodies, but we envision it as a model that can expand to accommodate data on a global scale.

  4. Extraordinarily high biomass benthic community on Southern Ocean seamounts.

    PubMed

    Thresher, R E; Adkins, J; Fallon, S J; Gowlett-Holmes, K; Althaus, F; Williams, A

    2011-01-01

    We describe a previously unknown assemblage of seamount-associated megabenthos that has by far the highest peak biomass reported in the deep-sea outside of vent communities. The assemblage was found at depths of 2-2.5 km on rocky geomorphic features off the southeast coast of Australia, in an area near the Sub-Antarctic Zone characterised by high rates of surface productivity and carbon export to the deep-ocean. These conditions, and the taxa in the assemblage, are widely distributed around the Southern mid-latitudes, suggesting the high-biomass assemblage is also likely to be widespread. The role of this assemblage in regional ecosystem and carbon dynamics and its sensitivities to anthropogenic impacts are unknown. The discovery highlights the lack of information on deep-sea biota worldwide and the potential for unanticipated impacts of deep-sea exploitation.

  5. Extraordinarily high biomass benthic community on Southern Ocean seamounts

    PubMed Central

    Thresher, R. E.; Adkins, J.; Fallon, S. J.; Gowlett-Holmes, K.; Althaus, F.; Williams, A.

    2011-01-01

    We describe a previously unknown assemblage of seamount-associated megabenthos that has by far the highest peak biomass reported in the deep-sea outside of vent communities. The assemblage was found at depths of 2–2.5 km on rocky geomorphic features off the southeast coast of Australia, in an area near the Sub-Antarctic Zone characterised by high rates of surface productivity and carbon export to the deep-ocean. These conditions, and the taxa in the assemblage, are widely distributed around the Southern mid-latitudes, suggesting the high-biomass assemblage is also likely to be widespread. The role of this assemblage in regional ecosystem and carbon dynamics and its sensitivities to anthropogenic impacts are unknown. The discovery highlights the lack of information on deep-sea biota worldwide and the potential for unanticipated impacts of deep-sea exploitation. PMID:22355636

  6. Archaeal Diversity Associated with Deep Sea Whalefalls

    NASA Astrophysics Data System (ADS)

    Wilpiszeski, R.; Goffredi, S.; Turk, K.; Vrijenhoek, R.; House, C. H.; Orphan, V.

    2005-12-01

    Deep sea whale fall sites support a diverse population of organisms in an otherwise sparsely populated environment. While the macro- and megafauna of these ecosystems have been investigated in some detail, less is known about the nature of associated microbial populations. 16S rRNA gene surveys were used to evaluate the diversity of Archaea in the sediment below one such whale fall at 2800 m water depth and at a nearby control site. A variety of Archaea were identified, including diverse uncultured marine crenarchaeota, phylotypes related to hydrogenotrophic methanogens (Methanogenium spp.), and methylotrophic methanogens associated with the Methanococcoides. No methanogens were discovered at the control site, while hydrogenotrophic methanogens accounted for approximately 20% of the samples from surface sediments below the whale and 35% of the Archaea identified from 12.5 to 15 cm below the whale; the single methylotrophic methanogen was identified within the 12.5 to 15 cm depth sample. The presence of methanogenic phylotypes associated with the whale fall corroborates geochemical observations of elevated methane concentrations observed in the shallow sediments directly beneath the whale fall. This combined geochemical and microbiological evidence suggests that near surface organic matter remineralization is occurring via a methanogenic pathway within this deep sea whale fall habitat rather than the typical sulfidogenic dominated diagenesis commonly observed at other whale fall locations and within shallow marine sediments worldwide.

  7. Mesoscale eddies transport deep-sea sediments.

    PubMed

    Zhang, Yanwei; Liu, Zhifei; Zhao, Yulong; Wang, Wenguang; Li, Jianru; Xu, Jingping

    2014-08-04

    Mesoscale eddies, which contribute to long-distance water mass transport and biogeochemical budget in the upper ocean, have recently been taken into assessment of the deep-sea hydrodynamic variability. However, how such eddies influence sediment movement in the deepwater environment has not been explored. Here for the first time we observed deep-sea sediment transport processes driven by mesoscale eddies in the northern South China Sea via a full-water column mooring system located at 2100 m water depth. Two southwestward propagating, deep-reaching anticyclonic eddies passed by the study site during January to March 2012 and November 2012 to January 2013, respectively. Our multiple moored instruments recorded simultaneous or lagging enhancement of suspended sediment concentration with full-water column velocity and temperature anomalies. We interpret these suspended sediments to have been trapped and transported from the southwest of Taiwan by the mesoscale eddies. The net near-bottom southwestward sediment transport by the two events is estimated up to one million tons. Our study highlights the significance of surface-generated mesoscale eddies on the deepwater sedimentary dynamic process.

  8. The Hawai'i Undersea Research Laboratory: Applying Innovative Deep-sea Technologies Toward Research, Service, and Stewardship in Marine Protected Areas of the Pacific Region

    NASA Astrophysics Data System (ADS)

    Smith, J. R.

    2012-12-01

    The Hawai'i Undersea Research Laboratory (HURL) is the only U.S. deep submergence facility in the Pacific Rim tasked with supporting undersea research necessary to fulfill the mission, goals, and objectives of the National Oceanic and Atmospheric Administration (NOAA), along with other national interests of importance. Over 30 years of submersible operations have resulted in nearly 1900 dives representing 9300 hours underwater, and a benthic ecology database derived from in-house video record logging of over 125,000 entries based on 1100 unique deep-sea animal identifications in the Hawaiian Archipelago. As a Regional Center within the Office of Ocean Exploration and Research (OER), HURL conducts undersea research in offshore and nearshore waters of the main and Northwestern Hawaiian Islands and waters of the central, southern, and western Pacific. HURL facilities primarily support marine research projects that require data acquisition at depths greater than wet diving methods. These consist of the research vessel Ka'imikai-o-Kanaloa (KOK), human occupied submersibles Pisces IV and Pisces V (2000 m), a new remotely operated vehicle (6000 m), and a multibeam bathymetric sonar system (11,000 m). In addition, HURL has also supported AAUS compliant wet diving since 2003, including technical mixed gas/rebreather work. While ecosystem studies of island, atoll, and seamount flanks are the largest component of the HURL science program, many other thematic research areas have been targeted including extreme and unique environments, new resources from the sea, episodic events to long term changes, and the development of innovative technologies. Several examples of HURL's contributions to marine protected areas (MPAs) include: (a) A long term presence in the pristine ecosystems of the Papahānaumokuākea Marine National Monument in the Northwestern Hawaiian Islands. Researchers from National Marine Fisheries have used HURL assets to study endangered Hawaiian Monk Seal habitat

  9. Endemicity, biogeograhy, composition, and community structure on a northeast pacific seamount.

    PubMed

    McClain, Craig R; Lundsten, Lonny; Ream, Micki; Barry, James; DeVogelaere, Andrew

    2009-01-01

    The deep ocean greater than 1 km covers the majority of the earth's surface. Interspersed on the abyssal plains and continental slope are an estimated 14000 seamounts, topographic features extending 1000 m off the seafloor. A variety of hypotheses are posited that suggest the ecological, evolutionary, and oceanographic processes on seamounts differ from those governing the surrounding deep sea. The most prominent and oldest of these hypotheses, the seamount endemicity hypothesis (SMEH), states that seamounts possess a set of isolating mechanisms that produce highly endemic faunas. Here, we constructed a faunal inventory for Davidson Seamount, the first bathymetric feature to be characterized as a 'seamount', residing 120 km off the central California coast in approximately 3600 m of water (Fig 1). We find little support for the SMEH among megafauna of a Northeast Pacific seamount; instead, finding an assemblage of species that also occurs on adjacent continental margins. A large percentage of these species are also cosmopolitan with ranges extending over much of the Pacific Ocean Basin. Despite the similarity in composition between the seamount and non-seamount communities, we provide preliminary evidence that seamount communities may be structured differently and potentially serve as source of larvae for suboptimal, non-seamount habitats.

  10. The Deep Seas--Unexpectedly, An Astounding Variety of Life

    ERIC Educational Resources Information Center

    MOSAIC, 1976

    1976-01-01

    As oceanographic technology advances, the study of deep-sea environments is accelerating. Numerous ecological theories concerning deep-sea food relationships, environmental extremes, and life forms are changing as the environments of the deepest ocean trenches are studied. Thousands of new species are being discovered and studied constantly. (MA)

  11. New Waves in Marine Science Symposium: Deep Sea !Discoveries!

    ERIC Educational Resources Information Center

    Allen, Betty, Comp.

    1989-01-01

    Presented are the abstracts from three research projects involving deep sea technology which were a part of a marine science symposium. Five sets of activities on deep sea science are included, one each for grades K-2, 3-5, 6-8 and 9-12, and informal education. (CW)

  12. Adapting to the Deep Sea: A Fun Activity with Bioluminescence

    ERIC Educational Resources Information Center

    Rife, Gwynne

    2006-01-01

    Over the past decade, much has been learned about the ocean's secrets and especially about the creatures of the deep sea. The deepest parts of the oceans are currently the focus of many new discoveries in both the physical and biological sciences. Middle school students find the deep sea fascinating and especially seem to enjoy its mysterious and…

  13. Platinum group nuggets in deep sea sediments

    NASA Technical Reports Server (NTRS)

    Brownlee, D. E.; Bates, B. A.; Wheelock, M. M.

    1984-01-01

    The existence of iron meteor oblation spheres in deep sea sediments was known for over a century. These spheres generally were believed to be composed of either pure magnetite and wustite or an oxide shell surrounding a NiFe metal core. A large number of 300 micron to 600 micron spheres found were pure oxide spheres, usually containing a solitary 10 micron platinum group nugget (pgn) composed almost entirely of group VIII metals. Twelve PGN's were analyzed and most had chondritic abundances with some depletions that correlate with element volatility. PGN formation by oxidation of a molten metal sphere entering the atmosphere cannot occur if the oxygen abundance in the atmosphere is less than half of its present value. The first appearance of PGN's in the geological record should mark when, in the Earth's history, oxygen rose to this level.

  14. Total nitrogen content of deep sea basalts

    NASA Technical Reports Server (NTRS)

    Norris, T. L.; Schaeffer, O. A.

    1982-01-01

    An estimate of the total nitrogen content of the earth's mantle, aimed at furnishing a further constraint for earth atmosphere origin and evolution models, was attempted through thermal neutron activation analysis via N-14(n,p)C-14 for the case of deep sea basalt glasses from the East Pacific Rise, the Mid-Atlantic Rift, and the Juan de Fuca Ridge. The increased nitrogen abundance of matrix material from the same samples as the glasses may be due to the incorporation of chemically-bound nitrogen from sea water, rather than dissolved molecular nitrogen. A discussion is presented of factors affecting observed basalt nitrogen content and its interpretation in terms of mantle nitrogen abundance. A 2 ppm N lower limit is estimated for the mantle.

  15. Benthic Foraminifera, Food in the Deep Sea, and Limits to Bentho-Pelagic Coupling

    NASA Astrophysics Data System (ADS)

    Thomas, E.; Boscolo-Galazzo, F.; Arreguin-Rodrigu, G. J.; Ortiz, S.; Alegret, L.

    2015-12-01

    The deep-sea is the largest habitat on Earth, contains highly diverse biota, but is very little known. Many of its abundant benthic biota (e.g., nematodes) are not preserved in the fossil record. Calcareous and agglutinated benthic foraminifera (unicellular eukaryotes, Rhizaria; efficient dispersers) and ostracodes (Animalia, Crustacea; non-efficient dispersers) are the most common organisms providing a fossil record of deep-sea environments. Very little food is supplied to the deep-sea, because organic matter produced by photosynthesis is largely degraded before it arrives at the seafloor. Only a few % of organic matter is carried to the ocean bottom by 'marine snow', with its particle size and behavior in the water column controlled by surface ecosystem structure, including type of dominant primary producers (diatoms, cyanobacteria). Food supply and its seasonality are generally seen as the dominant control on benthic assemblages (combined with oxygenation), providing bentho-pelagic coupling between primary and benthic productivity. Benthic foraminiferal assemblages (composition and density) thus are used widely to estimate past productivity, especially during episodes of global climate change, ocean acidification, and mass extinction of primary producers. We show that some environmental circumstances may result in interrupting bentho-pelagic coupling, e.g. through lateral supply of organic matter along continental margins (adding more refractory organic matter), through trophic focusing and/or fine particle winnowing on seamounts (giving an advantage to suspension feeders), and through carbonate undersaturation (giving advantage to infaunal over epifaunal calcifyers). In addition, increased remineralization of organic matter combined with increased metabolic rates may cause assemblages to reflect more oligotrophic conditions at stable primary productivity during periods of global warming. As a result, benthic foraminiferal accumulation rates must be carefully

  16. Boron isotopes in deep-sea bamboo corals: pH, vital effects and environmental factors

    NASA Astrophysics Data System (ADS)

    Farmer, J. R.; Hoenisch, B.; Hill, T. M.; LaVigne, M.; Robinson, L. F.

    2011-12-01

    Deep-sea corals are an intriguing archive for reconstructing deep-ocean environmental conditions, in particular with regard to anthropogenic climate change and ocean acidification. However, previous research in deep-sea aragonitic scleractinian corals observed heterogeneity in their geochemical composition that greatly exceeded the magnitude of variability expected from environmental conditions. Here we investigate the boron isotopic composition (δ11B) and B/Ca ratios of the calcitic gorgonian bamboo coral Keratoisis sp. (family Isididae) as potential indicators of seawater-pH at depth. Initial results from a specimen collected alive on Little Joe Seamount, CA (2136m depth) show that the δ11B of surface calcite is within the expected range of aqueous borate-δ11B, based on seawater pH, temperature, pressure and salinity. A radial cross section through an ~5 cm thick internode reveals largely homogeneous δ11B. However, in the centermost 0.5 cm of calcite growth adjacent to the axial core of the coral, a ~2% increase in δ11B corresponds with disequilibrium depletions in δ13C and δ18O, consistent with hypotheses for different growth modes of central calcite perhaps as a result of active calcite deposition along the axial core. Aside from this central region, the geochemical homogeneity and good agreement between coral surface δ11B and seawater borate δ11B suggests that bamboo corals may record deep-ocean carbon chemistry and thus pH. The cosmopolitan distribution of Keratoisis sp. in both living and fossil deep-sea coral communities thus potentially presents the opportunity to reconstruct recent and Holocene deep-water pH at high resolution.

  17. Ancient origin of the modern deep-sea fauna.

    PubMed

    Thuy, Ben; Gale, Andy S; Kroh, Andreas; Kucera, Michal; Numberger-Thuy, Lea D; Reich, Mike; Stöhr, Sabine

    2012-01-01

    The origin and possible antiquity of the spectacularly diverse modern deep-sea fauna has been debated since the beginning of deep-sea research in the mid-nineteenth century. Recent hypotheses, based on biogeographic patterns and molecular clock estimates, support a latest Mesozoic or early Cenozoic date for the origin of key groups of the present deep-sea fauna (echinoids, octopods). This relatively young age is consistent with hypotheses that argue for extensive extinction during Jurassic and Cretaceous Oceanic Anoxic Events (OAEs) and the mid-Cenozoic cooling of deep-water masses, implying repeated re-colonization by immigration of taxa from shallow-water habitats. Here we report on a well-preserved echinoderm assemblage from deep-sea (1000-1500 m paleodepth) sediments of the NE-Atlantic of Early Cretaceous age (114 Ma). The assemblage is strikingly similar to that of extant bathyal echinoderm communities in composition, including families and genera found exclusively in modern deep-sea habitats. A number of taxa found in the assemblage have no fossil record at shelf depths postdating the assemblage, which precludes the possibility of deep-sea recolonization from shallow habitats following episodic extinction at least for those groups. Our discovery provides the first key fossil evidence that a significant part of the modern deep-sea fauna is considerably older than previously assumed. As a consequence, most major paleoceanographic events had far less impact on the diversity of deep-sea faunas than has been implied. It also suggests that deep-sea biota are more resilient to extinction events than shallow-water forms, and that the unusual deep-sea environment, indeed, provides evolutionary stability which is very rarely punctuated on macroevolutionary time scales.

  18. Ancient Origin of the Modern Deep-Sea Fauna

    PubMed Central

    Thuy, Ben; Gale, Andy S.; Kroh, Andreas; Kucera, Michal; Numberger-Thuy, Lea D.; Reich, Mike; Stöhr, Sabine

    2012-01-01

    The origin and possible antiquity of the spectacularly diverse modern deep-sea fauna has been debated since the beginning of deep-sea research in the mid-nineteenth century. Recent hypotheses, based on biogeographic patterns and molecular clock estimates, support a latest Mesozoic or early Cenozoic date for the origin of key groups of the present deep-sea fauna (echinoids, octopods). This relatively young age is consistent with hypotheses that argue for extensive extinction during Jurassic and Cretaceous Oceanic Anoxic Events (OAEs) and the mid-Cenozoic cooling of deep-water masses, implying repeated re-colonization by immigration of taxa from shallow-water habitats. Here we report on a well-preserved echinoderm assemblage from deep-sea (1000–1500 m paleodepth) sediments of the NE-Atlantic of Early Cretaceous age (114 Ma). The assemblage is strikingly similar to that of extant bathyal echinoderm communities in composition, including families and genera found exclusively in modern deep-sea habitats. A number of taxa found in the assemblage have no fossil record at shelf depths postdating the assemblage, which precludes the possibility of deep-sea recolonization from shallow habitats following episodic extinction at least for those groups. Our discovery provides the first key fossil evidence that a significant part of the modern deep-sea fauna is considerably older than previously assumed. As a consequence, most major paleoceanographic events had far less impact on the diversity of deep-sea faunas than has been implied. It also suggests that deep-sea biota are more resilient to extinction events than shallow-water forms, and that the unusual deep-sea environment, indeed, provides evolutionary stability which is very rarely punctuated on macroevolutionary time scales. PMID:23071660

  19. Characterization of bacterial diversity associated with deep sea ferromanganese nodules from the South China Sea.

    PubMed

    Zhang, De-Chao; Liu, Yan-Xia; Li, Xin-Zheng

    2015-09-01

    Deep sea ferromanganese (FeMn) nodules contain metallic mineral resources and have great economic potential. In this study, a combination of culture-dependent and culture-independent (16S rRNA genes clone library and pyrosequencing) methods was used to investigate the bacterial diversity in FeMn nodules from Jiaolong Seamount, the South China Sea. Eleven bacterial strains including some moderate thermophiles were isolated. The majority of strains belonged to the phylum Proteobacteria; one isolate belonged to the phylum Firmicutes. A total of 259 near full-length bacterial 16S rRNA gene sequences in a clone library and 67,079 valid reads obtained using pyrosequencing indicated that members of the Gammaproteobacteria dominated, with the most abundant bacterial genera being Pseudomonas and Alteromonas. Sequence analysis indicated the presence of many organisms whose closest relatives are known manganese oxidizers, iron reducers, hydrogen-oxidizing bacteria and methylotrophs. This is the first reported investigation of bacterial diversity associated with deep sea FeMn nodules from the South China Sea.

  20. Deep-sea scleractinian coral age and depth distributions in the northwest Atlantic for the last 225,000 years

    USGS Publications Warehouse

    Robinson, L.F.; Adkins, J.F.; Scheirer, D.S.; Fernandez, D.P.; Gagnon, A.; Waller, R.G.

    2007-01-01

    Deep-sea corals have grown for over 200,000 yrs on the New England Seamounts in the northwest Atlantic, and this paper describes their distribution both with respect to depth and time. Many thousands of fossil scleractinian corals were collected on a series of cruises from 2003-2005; by contrast, live ones were scarce. On these seamounts, the depth distribution of fossil Desmophyllum dianthus (Esper, 1794) is markedly different to that of the colonial scleractinian corals, extending 750 m deeper in the water column to a distinct cut-off at 2500 m. This cut-off is likely to be controlled by the maximum depth of a notch-shaped feature in the seamount morphology. The ages of D. dianthus corals as determined by U-series measurements range from modern to older than 200,000 yrs. The age distribution is not constant over time, and most corals have ages from the last glacial period. Within the glacial period, increases in coral population density at Muir and Manning Seamounts coincided with times at which large-scale ocean circulation changes have been documented in the deep North Atlantic. Ocean circulation changes have an effect on coral distributions, but the cause of the link is not known. ?? 2007 Rosenstiel School of Marine and Atmospheric Science of the University of Miami.

  1. Endemicity, Biogeography, Composition, and Community Structure On a Northeast Pacific Seamount

    PubMed Central

    McClain, Craig R.; Lundsten, Lonny; Ream, Micki; Barry, James; DeVogelaere, Andrew

    2009-01-01

    The deep ocean greater than 1 km covers the majority of the earth's surface. Interspersed on the abyssal plains and continental slope are an estimated 14000 seamounts, topographic features extending 1000 m off the seafloor. A variety of hypotheses are posited that suggest the ecological, evolutionary, and oceanographic processes on seamounts differ from those governing the surrounding deep sea. The most prominent and oldest of these hypotheses, the seamount endemicity hypothesis (SMEH), states that seamounts possess a set of isolating mechanisms that produce highly endemic faunas. Here, we constructed a faunal inventory for Davidson Seamount, the first bathymetric feature to be characterized as a ‘seamount’, residing 120 km off the central California coast in approximately 3600 m of water (Fig 1). We find little support for the SMEH among megafauna of a Northeast Pacific seamount; instead, finding an assemblage of species that also occurs on adjacent continental margins. A large percentage of these species are also cosmopolitan with ranges extending over much of the Pacific Ocean Basin. Despite the similarity in composition between the seamount and non-seamount communities, we provide preliminary evidence that seamount communities may be structured differently and potentially serve as source of larvae for suboptimal, non-seamount habitats. PMID:19127302

  2. Oxygen isotopes in deep sea spherules

    NASA Technical Reports Server (NTRS)

    Mayeda, T. K.; Clayton, R. N.; Brownlee, D. E.

    1984-01-01

    The determination of the genetic relationships between the dust and small particles in the solar system, and the meteorites and larger bodies are examined. Oxygen isotopes proved useful in the identification of such relationships between one meteorite group and another. Of the various samples of submillimeter extraterrestrial particles available for laboratory study, only the deep sea spherules are abundant enough for precise oxygen isotope analysis using existing techniques. Complications arise in interpretation of the isotopic data, since these particles were melted during passage through the Earth's atmosphere, and have been in contact with seawater for prolonged periods. Spherules that were originally silicates are considered with the originally metallic ones to deduce their preterrestrial isotopic compositions. The type 1 spherules which enter the atmosphere as metallic particles, contain only atmospheric oxygen. The type S spherules contain a mixture of atmospheric oxygen and their original extraterrestrial oxygen. It is suggested that the Earth's mesosphere is strongly enriched in heavy isotopes of oxygen at altitudes near 90 km at which the iron particles are oxidized. Fractionation due to the combined diffusion of O atoms and O2 molecules may be responsible.

  3. Deep-Sea Submarine 'Ben Franklin'

    NASA Technical Reports Server (NTRS)

    1969-01-01

    The deep-sea submarine 'Ben Franklin' is being docked in the harbor. Named for American patriot and inventor Ben Franklin, who discovered the Gulf Steam, the 50-foot Ben Franklin was built between 1966 and 1968 in Switzerland for deep-ocean explorer Jacques Piccard and the Grumman Aircraft Engineering Corporation. The submersible made a famous 30-day drift dive off the East Coast of the United States and Canada in 1969 mapping the Gulf Stream's currents and sea life. It also made space exploration history by studying the behavior of aquanauts in a sealed, self-contained, self-sufficient capsule for NASA. On July 14, 1969, the Ben Franklin was towed to the high-velocity center of the Stream off the coast of Palm Beach, Florida. With a NASA observer on board, the sub descended to 1,000 feet off of Riviera Beach, Florida and drifted 1,400 miles north with the current for more than four weeks, reemerging near Maine. During the course of the dive, NASA conducted exhaustive analyses of virtually every aspect of onboard life. They measured sleep quality and patterns, sense of humor and behavioral shifts, physical reflexes, and the effect of a long-term routine on the crew. The submarine's record-shattering dive influenced the design of Apollo and Skylab missions and continued to guide NASA scientists as they devised future marned space-flight missions.

  4. Deep-Sea Research Submarine 'Ben Franklin'

    NASA Technical Reports Server (NTRS)

    1969-01-01

    This is an aerial view of the deep-sea research submarine 'Ben Franklin' at dock. Named for American patriot and inventor Ben Franklin, who discovered the Gulf Steam, the 50-foot Ben Franklin was built between 1966 and 1968 in Switzerland for deep-ocean explorer Jacques Piccard and the Grumman Aircraft Engineering Corporation. The submersible made a famous 30-day drift dive off the East Coast of the United States and Canada in 1969 mapping the Gulf Stream's currents and sea life, and also made space exploration history by studying the behavior of aquanauts in a sealed, self-contained, self-sufficient capsule for NASA. On July 14, 1969, the Ben Franklin was towed to the high-velocity center of the Stream off the coast of Palm Beach, Florida. With a NASA observer on board, the sub descended to 1,000 feet off of Riviera Beach, Florida and drifted 1,400 miles north with the current for more than four weeks, reemerging near Maine. During the course of the dive, NASA conducted exhaustive analyses of virtually every aspect of onboard life. They measured sleep quality and patterns, sense of humor and behavioral shifts, physical reflexes, and the effects of a long-term routine on the crew. The submarine's record-shattering dive influenced the design of Apollo and Skylab missions and continued to guide NASA scientists as they devised future marned space-flight missions.

  5. Calibration of fossil scleraxonian Southern Ocean deep-sea corals for U-series dating

    NASA Astrophysics Data System (ADS)

    Gutjahr, M.; Vance, D.; Hoffmann, D.; Hillenbrand, C.; Kuhn, G.

    2008-12-01

    The deep Southern Ocean has been pinpointed as candidate reservoir capable of storing the additional respired carbon that was drawn from the atmosphere during the Last Glacial Maximum compared with the present-day. In this context the determination of deep ocean ventilation ages is a commonly applied tool, potentially identifying radiocarbon depletion in glacial deep water and enhanced ocean stratification. In order to derive deep-sea ventilation ages most studies to date have used either radiocarbon age differences between paired planktic and benthic foraminifera samples or coupled U-Th and radiocarbon dates obtained from aragonitic deep-sea corals. Results from both these approaches are, however, as yet very scarce for the Southern Ocean. We present calendar ages for a set of deep-sea scleraxonian corals from the Marie Byrd Seamounts in the Amundsen Sea sector of the Southern Ocean (~123°W, ~69°S, 2500 m to 1430 m water depth) employing the 230Th/U-dating method. The aim of our study is to evaluate whether these calcitic octocorals can be used for ventilation age determinations. Our corals have significantly lower uranium concentrations than aragonitic deep-sea corals, ranging from 80 to 250 ng/g. Most corals of Holocene age reproduced the present-day seawater 234U/238U. Pre-Holocene corals, however, show a systematic enrichment of 234U, leading to slightly elevated deglacial initial 234U/238U and significantly higher 234U/238U for ~MIS5 sub-samples. These corals also appear to grow very slowly, on the order of only few μm/year, making it essential to sample as little coral material as possible for combined 230Th/U- and radiocarbon dating purposes. One coral, sampled at high-resolution in various sections returned ages that scatter around 10 ka BP and the early deglaciation, though several significantly older ages were obtained as well. The present-day (234U/238U) ACT in different sections of this coral is very homogenous (1.155 ± 0.003) and more or less

  6. Dispersal of volcaniclasts during deep-sea eruptions: Settling velocities and entrainment in buoyant seawater plumes

    NASA Astrophysics Data System (ADS)

    Barreyre, Thibaut; Soule, S. Adam; Sohn, Robert A.

    2011-08-01

    We use tank experiments to measure settling rates of deep-sea volcaniclastic material recovered from the Arctic (85°E Gakkel Ridge) and Pacific (Juan de Fuca Ridge, Loihi seamount) Oceans. We find that clast size and shape exert a strong influence on settling velocity, with velocities of ~ 30 cm/s for large (~ 8 mm), blocky clasts, compared to velocities of ~ 2.5 cm/s for small (< 0.5 mm), sheet-like clasts. We fit our observations to the generalized model of Ferguson and Church (2004) to establish empirical scaling laws for settling velocity, and then use these results to test the hypothesis that entrainment in a buoyant plume of hot seawater is an important dispersal mechanism for volcaniclastic material in the deep-sea (Clague et al., 2009). We superpose the observed settling rates on velocity fields generated with the Morton et al. (1956) model for turbulent plumes in stratified media to estimate the rise height of the clastic material under water column conditions corresponding to the Gakkel and Juan de Fuca (JdFR) Ridges, and then estimate dispersal distances assuming the grains settle to the seafloor while being advected in lateral currents. Dispersal distances in our model are a function plume strength (i.e., buoyancy flux), lateral current speeds, and clast settling velocity. Our model demonstrates that large (30 GW) eruption 'megaplumes' can loft volcaniclastic material more than a kilometer above the seafloor where entrainment in deep-sea currents can advect dominant clast types (~ 1 mm, blocky grains) up to a few hundred meters from a source vent. Small bubble-wall fragments (e.g., limu o Pele) entrained in a megaplume could be advected as far as a few kilometers from a source region. These results indicate that entrainment in buoyant seawater plumes during an eruption may play an important role in clast dispersal, but it is not clear if this mechanism can explain the distribution of volcaniclastic material at the sites on the Gakkel and Juan de Fuca

  7. Food web structure and vulnerability of a deep-sea ecosystem in the NW Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Tecchio, Samuele; Coll, Marta; Christensen, Villy; Company, Joan B.; Ramírez-Llodra, Eva; Sardà, Francisco

    2013-05-01

    There is increasing fishing pressure on the continental margins of the oceans, and this raises concerns about the vulnerability of the ecosystems thriving there. The current knowledge of the biology of deep-water fish species identifies potential reduced resilience to anthropogenic disturbance. However, there are extreme difficulties in sampling the deep sea, resulting in poorly resolved and indirectly obtained food-web relationships. Here, we modelled the flows and biomasses of a Mediterranean deep-sea ecosystem, the Catalan Sea continental slope at depths of 1000-1400 m. This is the first model of a deep-water ecosystem in the Mediterranean Sea. The objectives were to (a) quantitatively describe the food web structure of the ecosystem, (b) examine the role of key species in the ecosystem, and (c) explore the vulnerability of this deep-sea ecosystem to potential future fishing exploitation. We used the Ecopath with Ecosim (EwE) modelling approach and software to model the ecosystem. The trophic model included 18 consumers, a marine snow group, and a sediment detritus group. Trophic network analysis identified low levels of consumer biomass cycling and low system omnivory index when compared with expected values of marine ecosystems, and higher cycling and omnivory when compared with available EwE models of shallower areas of the Mediterranean Sea. The majority of flows in the ecosystem were concentrated at the trophic level of first-order consumers (TL 2). Benthic invertebrates and demersal sharks were identified to have key ecological roles in the ecosystem. We used the dynamic temporal model Ecosim to simulate expansion of the red-shrimp benthic trawl fishery that currently operates at shallower depths, down to 800 m depth. The simulations showed reductions in fish biomass and that the state of the deep continental slope ecosystem in the western Mediterranean seems to be the result of a long-term succession process, which has reached ecological stability, and is

  8. Patterns of Deep-Sea Genetic Connectivity in the New Zealand Region: Implications for Management of Benthic Ecosystems

    PubMed Central

    Bors, Eleanor K.; Rowden, Ashley A.; Maas, Elizabeth W.; Clark, Malcolm R.; Shank, Timothy M.

    2012-01-01

    Patterns of genetic connectivity are increasingly considered in the design of marine protected areas (MPAs) in both shallow and deep water. In the New Zealand Exclusive Economic Zone (EEZ), deep-sea communities at upper bathyal depths (<2000 m) are vulnerable to anthropogenic disturbance from fishing and potential mining operations. Currently, patterns of genetic connectivity among deep-sea populations throughout New Zealand’s EEZ are not well understood. Using the mitochondrial Cytochrome Oxidase I and 16S rRNA genes as genetic markers, this study aimed to elucidate patterns of genetic connectivity among populations of two common benthic invertebrates with contrasting life history strategies. Populations of the squat lobster Munida gracilis and the polychaete Hyalinoecia longibranchiata were sampled from continental slope, seamount, and offshore rise habitats on the Chatham Rise, Hikurangi Margin, and Challenger Plateau. For the polychaete, significant population structure was detected among distinct populations on the Chatham Rise, the Hikurangi Margin, and the Challenger Plateau. Significant genetic differences existed between slope and seamount populations on the Hikurangi Margin, as did evidence of population differentiation between the northeast and southwest parts of the Chatham Rise. In contrast, no significant population structure was detected across the study area for the squat lobster. Patterns of genetic connectivity in Hyalinoecia longibranchiata are likely influenced by a number of factors including current regimes that operate on varying spatial and temporal scales to produce potential barriers to dispersal. The striking difference in population structure between species can be attributed to differences in life history strategies. The results of this study are discussed in the context of existing conservation areas that are intended to manage anthropogenic threats to deep-sea benthic communities in the New Zealand region. PMID:23185341

  9. Nuclear astrophysics: Deep-sea diving for stellar debris

    NASA Astrophysics Data System (ADS)

    Thielemann, Friedrich-Karl

    2015-12-01

    Deep-sea sediments reveal the production sites of the heaviest chemical elements in the Universe to be neutron star mergers -- rare events that eject large amounts of mass -- and not core-collapse supernovae.

  10. Challenging the paradigms of deep-sea ecology.

    PubMed

    Danovaro, Roberto; Snelgrove, Paul V R; Tyler, Paul

    2014-08-01

    Deep-sea ecosystems represent Earth's major ecological research frontier. Focusing on seafloor ecosystems, we demonstrate how new technologies underpin discoveries that challenge major ecological hypotheses and paradigms, illuminating new deep-sea geosphere-biosphere interactions. We now recognize greater habitat complexity, new ecological interactions and the importance of 'dark energy', and chemosynthetic production in fuelling biodiversity. We also acknowledge functional hotspots that contradict a food-poor, metabolically inactive, and minor component of global carbon cycles. Symbioses appear widespread, revealing novel adaptations. Populations show complex spatial structure and evolutionary histories. These new findings redefine deep-sea ecology and the role of Earth's largest biome in global biosphere functioning. Indeed, deep-sea exploration can open new perspectives in ecological research to help mitigate exploitation impacts.

  11. U.S. Deep-Sea Tsunameter Network Fully Operational

    DTIC Science & Technology

    2008-09-01

    southeast. On April 16, 2007, DART II station 55401 was established in the Tasman Sea . In March 2008, the DART team assisted in the second Australian...U.S. Deep- Sea Tsunameter Network Fully Operational Douglas Maxwell, Shannon McArthur, William Hansen, Richard Bouchard, Ian Sears, Jack Higgs and...of deep- sea tsunameters. This effort was an integral part of the National Tsunami Hazard Mitigation Program. The Tsunami Program is part of a

  12. Deep-Sea Hydrothermal-Vent Sampler

    NASA Technical Reports Server (NTRS)

    Behar, Alberto E.; Venkateswaran, Kasthur; Matthews, Jaret B.

    2008-01-01

    An apparatus is being developed for sampling water for signs of microbial life in an ocean hydrothermal vent at a depth of as much as 6.5 km. Heretofore, evidence of microbial life in deep-sea hydrothermal vents has been elusive and difficult to validate. Because of the extreme conditions in these environments (high pressures and temperatures often in excess of 300 C), deep-sea hydrothermal- vent samplers must be robust. Because of the presumed low density of biomass of these environments, samplers must be capable of collecting water samples of significant volume. It is also essential to prevent contamination of samples by microbes entrained from surrounding waters. Prior to the development of the present apparatus, no sampling device was capable of satisfying these requirements. The apparatus (see figure) includes an intake equipped with a temperature probe, plus several other temperature probes located away from the intake. The readings from the temperature probes are utilized in conjunction with readings from flowmeters to determine the position of the intake relative to the hydrothermal plume and, thereby, to position the intake to sample directly from the plume. Because it is necessary to collect large samples of water in order to obtain sufficient microbial biomass but it is not practical to retain all the water from the samples, four filter arrays are used to concentrate the microbial biomass (which is assumed to consist of particles larger than 0.2 m) into smaller volumes. The apparatus can collect multiple samples per dive and is designed to process a total volume of 10 L of vent fluid, of which most passes through the filters, leaving a total possibly-microbe-containing sample volume of 200 mL remaining in filters. A rigid titanium nose at the intake is used for cooling the sample water before it enters a flexible inlet hose connected to a pump. As the water passes through the titanium nose, it must be cooled to a temperature that is above a mineral

  13. Ectoparasitism on deep-sea fishes in the western North Atlantic: In situ observations from ROV surveys

    USGS Publications Warehouse

    Quattrini, Andrea; Demopoulos, Amanda

    2016-01-01

    A complete understanding of how parasites influence marine ecosystem functioning requires characterizing a broad range of parasite-host interactions while determining the effects of parasitism in a variety of habitats. In deep-sea fishes, the prevalence of parasitism remains poorly understood. Knowledge of ectoparasitism, in particular, is limited because collection methods often cause dislodgment of ectoparasites from their hosts. High-definition video collected during 43 remotely operated vehicle surveys (2013–2014) provided the opportunity to examine ectoparasitism on fishes across habitats (open slope, canyon, seamount, cold seep) and depths (494–4689 m) off the northeastern U.S., while providing high-resolution images and valuable observations of fish behavior. Only 9% (n = 125 individuals) of all observed fishes (25 species) were confirmed with ectoparasites, but higher percentages (∼33%) were observed for some of the most abundant fish species (e.g., Antimora rostrata). Ectoparasites included two copepod families (Lernaeopodidae, Sphyriidae) that infected four host species, two isopod families (Cymothoidae, Aegidae) that infected three host species, and one isopod family (Gnathiidae) that infected 19 host species. Hyperparasitism was also observed. As host diversity declined with depth, ectoparasite diversity declined; only gnathiids were observed at depths down to 3260 m. Thus, gnathiids appear to be the most successful group to infect a diversity of fishes across a broad depth range in the deep sea. For three dominant fishes (A. rostrata, Nezumia bairdii, Synaphobranchus spp.), the abundance and intensity of ectoparasitism peaked in different depths and habitats depending on the host species examined. Notably, gnathiid infections were most intense on A. rostrata, particularly in submarine canyons, suggesting that these habitats may increase ectoparasite infections. Although ectoparasitism is often overlooked in deep-sea benthic communities

  14. Ectoparasitism on deep-sea fishes in the western North Atlantic: In situ observations from ROV surveys.

    PubMed

    Quattrini, Andrea M; Demopoulos, Amanda W J

    2016-12-01

    A complete understanding of how parasites influence marine ecosystem functioning requires characterizing a broad range of parasite-host interactions while determining the effects of parasitism in a variety of habitats. In deep-sea fishes, the prevalence of parasitism remains poorly understood. Knowledge of ectoparasitism, in particular, is limited because collection methods often cause dislodgment of ectoparasites from their hosts. High-definition video collected during 43 remotely operated vehicle surveys (2013-2014) provided the opportunity to examine ectoparasitism on fishes across habitats (open slope, canyon, seamount, cold seep) and depths (494-4689 m) off the northeastern U.S., while providing high-resolution images and valuable observations of fish behavior. Only 9% (n = 125 individuals) of all observed fishes (25 species) were confirmed with ectoparasites, but higher percentages (∼33%) were observed for some of the most abundant fish species (e.g., Antimora rostrata). Ectoparasites included two copepod families (Lernaeopodidae, Sphyriidae) that infected four host species, two isopod families (Cymothoidae, Aegidae) that infected three host species, and one isopod family (Gnathiidae) that infected 19 host species. Hyperparasitism was also observed. As host diversity declined with depth, ectoparasite diversity declined; only gnathiids were observed at depths down to 3260 m. Thus, gnathiids appear to be the most successful group to infect a diversity of fishes across a broad depth range in the deep sea. For three dominant fishes (A. rostrata, Nezumia bairdii, Synaphobranchus spp.), the abundance and intensity of ectoparasitism peaked in different depths and habitats depending on the host species examined. Notably, gnathiid infections were most intense on A. rostrata, particularly in submarine canyons, suggesting that these habitats may increase ectoparasite infections. Although ectoparasitism is often overlooked in deep-sea benthic communities, our

  15. Challenging Oil Bioremediation at Deep-Sea Hydrostatic Pressure.

    PubMed

    Scoma, Alberto; Yakimov, Michail M; Boon, Nico

    2016-01-01

    The Deepwater Horizon accident has brought oil contamination of deep-sea environments to worldwide attention. The risk for new deep-sea spills is not expected to decrease in the future, as political pressure mounts to access deep-water fossil reserves, and poorly tested technologies are used to access oil. This also applies to the response to oil-contamination events, with bioremediation the only (bio)technology presently available to combat deep-sea spills. Many questions about the fate of petroleum-hydrocarbons within deep-sea environments remain unanswered, as well as the main constraints limiting bioremediation under increased hydrostatic pressures and low temperatures. The microbial pathways fueling oil bioassimilation are unclear, and the mild upregulation observed for beta-oxidation-related genes in both water and sediments contrasts with the high amount of alkanes present in the spilled oil. The fate of solid alkanes (tar), hydrocarbon degradation rates and the reason why the most predominant hydrocarbonoclastic genera were not enriched at deep-sea despite being present at hydrocarbon seeps at the Gulf of Mexico have been largely overlooked. This mini-review aims at highlighting the missing information in the field, proposing a holistic approach where in situ and ex situ studies are integrated to reveal the principal mechanisms accounting for deep-sea oil bioremediation.

  16. Challenging Oil Bioremediation at Deep-Sea Hydrostatic Pressure

    PubMed Central

    Scoma, Alberto; Yakimov, Michail M.; Boon, Nico

    2016-01-01

    The Deepwater Horizon accident has brought oil contamination of deep-sea environments to worldwide attention. The risk for new deep-sea spills is not expected to decrease in the future, as political pressure mounts to access deep-water fossil reserves, and poorly tested technologies are used to access oil. This also applies to the response to oil-contamination events, with bioremediation the only (bio)technology presently available to combat deep-sea spills. Many questions about the fate of petroleum-hydrocarbons within deep-sea environments remain unanswered, as well as the main constraints limiting bioremediation under increased hydrostatic pressures and low temperatures. The microbial pathways fueling oil bioassimilation are unclear, and the mild upregulation observed for beta-oxidation-related genes in both water and sediments contrasts with the high amount of alkanes present in the spilled oil. The fate of solid alkanes (tar), hydrocarbon degradation rates and the reason why the most predominant hydrocarbonoclastic genera were not enriched at deep-sea despite being present at hydrocarbon seeps at the Gulf of Mexico have been largely overlooked. This mini-review aims at highlighting the missing information in the field, proposing a holistic approach where in situ and ex situ studies are integrated to reveal the principal mechanisms accounting for deep-sea oil bioremediation. PMID:27536290

  17. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic deep-sea... 46 Shipping 7 2011-10-01 2011-10-01 false Deep-sea sounding apparatus. 167.40-20 Section...

  18. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic deep-sea... 46 Shipping 7 2010-10-01 2010-10-01 false Deep-sea sounding apparatus. 167.40-20 Section...

  19. Changes in nematode communities in different physiographic sites of the condor seamount (north-East atlantic ocean) and adjacent sediments.

    PubMed

    Zeppilli, Daniela; Bongiorni, Lucia; Serrão Santos, Ricardo; Vanreusel, Ann

    2014-01-01

    Several seamounts are known as 'oases' of high abundances and biomass and hotspots of biodiversity in contrast to the surrounding deep-sea environments. Recent studies have indicated that each single seamount can exhibit a high intricate habitat turnover. Information on alpha and beta diversity of single seamount is needed in order to fully understand seamounts contribution to regional and global biodiversity. However, while most of the seamount research has been focused on summits, studies considering the whole seamount structure are still rather poor. In the present study we analysed abundance, biomass and diversity of nematodes collected in distinct physiographic sites and surrounding sediments of the Condor Seamount (Azores, North-East Atlantic Ocean). Our study revealed higher nematode biomass in the seamount bases and values 10 times higher in the Condor sediments than in the far-field site. Although biodiversity indices did not showed significant differences comparing seamount sites and far-field sites, significant differences were observed in term of nematode composition. The Condor summit harboured a completely different nematode community when compared to the other seamount sites, with a high number of exclusive species and important differences in term of nematode trophic diversity. The oceanographic conditions observed around the Condor Seamount and the associated sediment mixing, together with the high quality of food resources available in seamount base could explain the observed patterns. Our results support the hypothesis that seamounts maintain high biodiversity through heightened beta diversity and showed that not only summits but also seamount bases can support rich benthic community in terms of standing stocks and diversity. Furthermore functional diversity of nematodes strongly depends on environmental conditions link to the local setting and seamount structure. This finding should be considered in future studies on seamounts, especially in

  20. Changes in Nematode Communities in Different Physiographic Sites of the Condor Seamount (North-East Atlantic Ocean) and Adjacent Sediments

    PubMed Central

    Zeppilli, Daniela; Bongiorni, Lucia; Serrão Santos, Ricardo; Vanreusel, Ann

    2014-01-01

    Several seamounts are known as ‘oases’ of high abundances and biomass and hotspots of biodiversity in contrast to the surrounding deep-sea environments. Recent studies have indicated that each single seamount can exhibit a high intricate habitat turnover. Information on alpha and beta diversity of single seamount is needed in order to fully understand seamounts contribution to regional and global biodiversity. However, while most of the seamount research has been focused on summits, studies considering the whole seamount structure are still rather poor. In the present study we analysed abundance, biomass and diversity of nematodes collected in distinct physiographic sites and surrounding sediments of the Condor Seamount (Azores, North-East Atlantic Ocean). Our study revealed higher nematode biomass in the seamount bases and values 10 times higher in the Condor sediments than in the far-field site. Although biodiversity indices did not showed significant differences comparing seamount sites and far-field sites, significant differences were observed in term of nematode composition. The Condor summit harboured a completely different nematode community when compared to the other seamount sites, with a high number of exclusive species and important differences in term of nematode trophic diversity. The oceanographic conditions observed around the Condor Seamount and the associated sediment mixing, together with the high quality of food resources available in seamount base could explain the observed patterns. Our results support the hypothesis that seamounts maintain high biodiversity through heightened beta diversity and showed that not only summits but also seamount bases can support rich benthic community in terms of standing stocks and diversity. Furthermore functional diversity of nematodes strongly depends on environmental conditions link to the local setting and seamount structure. This finding should be considered in future studies on seamounts, especially in

  1. Two major Cenozoic episodes of phosphogenesis recorded in equatorial Pacific seamount deposits

    USGS Publications Warehouse

    Hein, J.R.; Hsueh-Wen, Yeh; Gunn, S.H.; Sliter, W.V.; Benninger, L.M.; Chung-Ho, Wang

    1993-01-01

    The phosphorites occur in a wide variety of forms, but most commonly carbonate fluorapatite (CFA) replaced middle Eocene and older carbonate sediment in a deep water environment (>1000 m). Element ratios distinguish seamount phosphorites from continental margin, plateau, and insular phosphorites. Uranium and thorium contents are low and total rare earch element (REE) contents are generally high. The paleoceanographic conditions initiated and sustained development of phosphorite by accumulation of dissolved phosphorus in the deep sea during relatively stable climatic conditions when oceanic circulation was sluggish. Fluctuations in climate, sealevel, and upwelling that accompanied the climate transitions may have driven cycles of enrichment and depletion of the deep-sea phosphorus reservoir. -from Authors

  2. Environmental Adaptation of Dihydrofolate Reductase from Deep-Sea Bacteria.

    PubMed

    Ohmae, Eiji; Gekko, Kunihiko; Kato, Chiaki

    2015-01-01

    In order to elucidate the molecular adaptation mechanisms of enzymes to the high hydrostatic pressure of the deep sea, we cloned, purified, and characterized more than ten dihydrofolate reductases (DHFRs) from bacteria living in deep-sea and ambient atmospheric pressure environments. The nucleotide and amino acid sequences of these DHFRs indicate the deep-sea bacteria are adapted to their environments after the differentiation of their genus from ancestors inhabiting atmospheric pressure environments. In particular, the backbone structure of the deep-sea DHFR from Moritella profunda (mpDHFR) almost overlapped with the normal homolog from Escherichia coli (ecDHFR). Thus, those of other DHFRs would also overlap on the basis of their sequence similarities. However, the structural stability of both DHFRs was quite different: compared to ecDHFR, mpDHFR was more thermally stable but less stable against urea and pressure unfolding. The smaller volume changes due to unfolding suggest that the native structure of mpDHFR has a smaller cavity and/or enhanced hydration compared to ecDHFR. High hydrostatic pressure reduced the enzymatic activity of many DHFRs, but three deep-sea DHFRs and the D27E mutant of ecDHFR exhibited pressure-dependent activation. The inverted activation volumes from positive to negative values indicate the modification of their structural dynamics, conversion of the rate-determining step of the enzymatic reaction, and different contributions of the cavity and hydration to the transition-state structure. Since the cavity and hydration depend on amino acid side chains, DHFRs would adapt to the deep-sea environment by regulating the cavity and hydration by substituting their amino acid side chains without altering their backbone structure. The results of this study clearly indicate that the cavity and hydration play important roles in the adaptation of enzymes to the deep-sea environment.

  3. Fungi and macroaggregation in deep-sea sediments.

    PubMed

    Damare, Samir; Raghukumar, Chandralata

    2008-07-01

    Whereas fungi in terrestrial soils have been well studied, little is known of them in deep-sea sediments. Recent studies have demonstrated the presence of fungal hyphae in such sediments but in low abundance. We present evidence in this study that one of the apparent reasons for the poor detection of fungi in deep-sea sediments is their cryptic presence in macroaggregates. Fungal biomass carbon from different core sections of deep-sea sediments from approximately 5000 m depth in the Central Indian Ocean was estimated based on direct microscopic detection of fungal mycelia. Treatment of sediment samples with ethylenediamine tetra-acetic acid (EDTA) enabled more frequent detection and significantly higher biomass than in samples without such treatment. Treatment with EDTA resulted in detecting various stages of breakdown of aggregates in the sediments, gradually revealing the presence of fungal hyphae within them. Experimental studies of a deep-sea, as well as three terrestrial isolates of fungi, showed that all could grow at 200 bar and 5 degrees C in a nutrient medium and in deep-sea sediment extract. Hyphae of fungi grown in sediment extract under the above conditions showed various stages of accretion of particles around them, leading to the formation of aggregates. Such aggregates showed the presence of humic material, carbohydrate, and proteins. We suggest that fungi in deep-sea sediments may be involved in humic aggregate formation by processes very similar to those in terrestrial sediments. The importance of such a process in carbon sequestration and food web in the deep sea needs to be examined.

  4. Microdiversity of deep-sea Bacillales isolated from Tyrrhenian sea sediments as revealed by ARISA, 16S rRNA gene sequencing and BOX-PCR fingerprinting.

    PubMed

    Ettoumi, Besma; Guesmi, Amel; Brusetti, Lorenzo; Borin, Sara; Najjari, Afef; Boudabous, Abdellatif; Cherif, Ameur

    2013-01-01

    With respect to their terrestrial relatives, marine Bacillales have not been sufficiently investigated. In this report, the diversity of deep-sea Bacillales, isolated from seamount and non-seamount stations at 3,425 to 3,580 m depth in the Tyrrhenian Sea, was investigated using PCR fingerprinting and 16S rRNA sequence analysis. The isolate collection (n=120) was de-replicated by automated ribosomal intergenic spacer analysis (ARISA), and phylogenetic diversity was analyzed by 16S rRNA gene sequencing of representatives of each ARISA haplotype (n=37). Phylogenetic analysis of isolates showed their affiliation to six different genera of low G+C% content Gram-positive Bacillales: Bacillus, Staphylococcus, Exiguobacterium, Paenibacillus, Lysinibacillus and Terribacillus. Bacillus was the dominant genus represented by the species B. licheniformis, B. pumilus, B. subtilis, B. amyloliquefaciens and B. firmus, typically isolated from marine sediments. The most abundant species in the collection was B. licheniformis (n=85), which showed seven distinct ARISA haplotypes with haplotype H8 being the most dominant since it was identified by 63 isolates. The application of BOX-PCR fingerprinting to the B. licheniformis sub-collection allowed their separation into five distinct BOX genotypes, suggesting a high level of intraspecies diversity among marine B. licheniformis strains. This species also exhibited distinct strain distribution between seamount and non-seamount stations and was shown to be highly prevalent in non-seamount stations. This study revealed the great microdiversity of marine Bacillales and contributes to understanding the biogeographic distribution of marine bacteria in deep-sea sediments.

  5. Microdiversity of Deep-Sea Bacillales Isolated from Tyrrhenian Sea Sediments as Revealed by ARISA, 16S rRNA Gene Sequencing and BOX-PCR Fingerprinting

    PubMed Central

    Ettoumi, Besma; Guesmi, Amel; Brusetti, Lorenzo; Borin, Sara; Najjari, Afef; Boudabous, Abdellatif; Cherif, Ameur

    2013-01-01

    With respect to their terrestrial relatives, marine Bacillales have not been sufficiently investigated. In this report, the diversity of deep-sea Bacillales, isolated from seamount and non-seamount stations at 3,425 to 3,580 m depth in the Tyrrhenian Sea, was investigated using PCR fingerprinting and 16S rRNA sequence analysis. The isolate collection (n=120) was de-replicated by automated ribosomal intergenic spacer analysis (ARISA), and phylogenetic diversity was analyzed by 16S rRNA gene sequencing of representatives of each ARISA haplotype (n=37). Phylogenetic analysis of isolates showed their affiliation to six different genera of low G+C% content Gram-positive Bacillales: Bacillus, Staphylococcus, Exiguobacterium, Paenibacillus, Lysinibacillus and Terribacillus. Bacillus was the dominant genus represented by the species B. licheniformis, B. pumilus, B. subtilis, B. amyloliquefaciens and B. firmus, typically isolated from marine sediments. The most abundant species in the collection was B. licheniformis (n=85), which showed seven distinct ARISA haplotypes with haplotype H8 being the most dominant since it was identified by 63 isolates. The application of BOX-PCR fingerprinting to the B. licheniformis sub-collection allowed their separation into five distinct BOX genotypes, suggesting a high level of intraspecies diversity among marine B. licheniformis strains. This species also exhibited distinct strain distribution between seamount and non-seamount stations and was shown to be highly prevalent in non-seamount stations. This study revealed the great microdiversity of marine Bacillales and contributes to understanding the biogeographic distribution of marine bacteria in deep-sea sediments. PMID:24005887

  6. A ubiquitous thermoacidophilic archaeon from deep-sea hydrothermal vents

    USGS Publications Warehouse

    Reysenbach, A.-L.; Liu, Yajing; Banta, A.B.; Beveridge, T.J.; Kirshtein, J.D.; Schouten, S.; Tivey, M.K.; Von Damm, Karen L.; Voytek, M.A.

    2006-01-01

    Deep-sea hydrothermal vents are important in global biogeochemical cycles, providing biological oases at the sea floor that are supported by the thermal and chemical flux from the Earth's interior. As hot, acidic and reduced hydrothermal fluids mix with cold, alkaline and oxygenated sea water, minerals precipitate to form porous sulphide-sulphate deposits. These structures provide microhabitats for a diversity of prokaryotes that exploit the geochemical and physical gradients in this dynamic ecosystem. It has been proposed that fluid pH in the actively venting sulphide structures is generally low (pH < 4.5), yet no extreme thermoacidophile has been isolated from vent deposits. Culture-independent surveys based on ribosomal RNA genes from deep-sea hydrothermal deposits have identified a widespread euryarchaeotal lineage, DHVE2 (deep-sea hydrothermal vent euryarchaeotic 2). Despite the ubiquity and apparent deep-sea endemism of DHVE2, cultivation of this group has been unsuccessful and thus its metabolism remains a mystery. Here we report the isolation and cultivation of a member of the DHVE2 group, which is an obligate thermoacidophilic sulphur- or iron-reducing heterotroph capable of growing from pH 3.3 to 5.8 and between 55 and 75??C. In addition, we demonstrate that this isolate constitutes up to 15% of the archaeal population, providing evidence that thermoacidophiles may be key players in the sulphur and iron cycling at deep-sea vents. ?? 2006 Nature Publishing Group.

  7. Drivers of foraminiferal evolution and extinction in the deep sea

    NASA Astrophysics Data System (ADS)

    van Kerckhoven, L.; Hayward, B. W.

    2009-04-01

    This PhD research aims to increase understanding of the causes of global evolution and extinction in the deep sea. This is addressed by focusing on the enigmatic extinction of a distinctive group of cosmopolitan deep-sea benthic foraminifera during the late Pliocene-Middle Pleistocene "Last Global Extinction" (LGE) (3 - 0.12 Ma). This so-called "Extinction Group", comprising nearly 100 species (c. 25% of deep-sea foraminiferal diversity at that time), all shared a similar morphology of elongate, cylindrical and uniserial tests with small, specialised apertures. To find out what type of change could have been so all-encompassing to decimate and wipe out this abundant and cosmopolitan group of foraminifera, even precluding them to re-immigrate from refugia, we extend the studies back in time. The LGE was coeval with the pulsed expansion of the northern hemisphere ice cap, rendering deep-sea conditions colder and more oxygenated during increasingly severe glacials. The dominant hypothesis states that the extinct taxa and/or their food supply, both adapted to a Greenhouse World (65 - 33.5 Ma), were unable to cope with these large and rapid changes in the deep-sea environment. To test this proposition, we obtained a record of the occurrence and abundance of the "Extinction Group" species in ODP Sites 689 (Southern Ocean) and 1211 (North Pacific Ocean) throughout the Cenozoic, allowing the investigation of palaeoenvironmental drivers of abundance, extinctions and originations of species.

  8. Abundance of litter on Condor seamount (Azores, Portugal, Northeast Atlantic)

    NASA Astrophysics Data System (ADS)

    Pham, C. K.; Gomes-Pereira, J. N.; Isidro, E. J.; Santos, R. S.; Morato, T.

    2013-12-01

    Marine litter is an emerging problem for the world's ocean health but little is known on its distribution and abundance on seamounts and how it affects deep-sea ecosystems. The scientific underwater laboratory set up on Condor seamount offered an ideal case study for the first documentation of litter distribution on a shallow seamount with historical fishing. A total of 48 video transects deployed on the summit (n=45) and the northern flank (n=3) covered an area of 0.031 and 0.025km2, respectively, revealing 55 litter items. Litter density on the summit was 1439 litter items km-2, whilst on the deeper northern flank, estimates indicate densities of 397 litter items km-2. Lost fishing line was the dominant litter item encountered on both areas (73% of total litter on the summit and 50% on northern flank), all being entirely or partly entangled in the locally abundant gorgonians Dentomuricea cf. meteor and Viminella flagellum. Other items included lost weights, anchors and glass bottles. The predominance of lost fishing gear identifies the source of litter on Condor seamount as exclusively ocean-based and related to fishing activities. Abundance of litter on the Condor seamount was much lower than that reported from other locations closer to populated areas.

  9. [Four cases of pulmonary tuberculosis among deep-sea fishermen].

    PubMed

    Ono, Hidemaro; Murakami, Reiko; Tsuruwaka, Mia; Suzuki, Yoshihiko

    2003-06-01

    Pulmonary tuberculosis among deep-sea fishermen was reported. Four pulmonary tuberculosis cases among fishing boat members engaged in deep-sea fishing were registered at the Kesennuma Health Center during three years period from 2000 to 2002. Crew engaging in deep-sea fishing live together in a narrow cabin with inadequate airconditioning for a long period of time, about 1 year. It is difficult to consult with a medical institution in an open sea. If a tuberculosis patient breaks out in a boat, the risk of transmission of tuberculosis to other members is high. In boats of all four cases in this report, about 30 to 70 percent of crew were Indonesian. Indonesia is one of the high burden countries of tuberculosis in the world. The Japanese fishing boat members have received the medical checkup every year. Indonesians have also received the pre-employment medical checkup, however, the improvement in the quality of this medical checkup is required.

  10. Orbital forcing of deep-sea benthic species diversity

    USGS Publications Warehouse

    Cronin, T. M.; Raymo, M.E.

    1997-01-01

    Explanations for the temporal and spatial patterns of species biodiversity focus on stability-time, disturbance-mosaic (biogenic microhabitat heterogeneity) and competition-predation (biotic interactions) hypotheses. The stability-time hypothesis holds that high species diversity in the deep sea and in the tropics reflects long-term climatic stability. But the influence of climate change on deep-sea diversity has not been studied and recent evidence suggests that deep-sea environments undergo changes in climatically driven temperature and flux of nutrients and organic-carbon during glacial-interglacial cycles. Here we show that Pliocene (2.85-2.40 Myr) deep-sea North Atlantic benthic ostracod (Crustacea) species diversity is related to solar insolation changes caused by 41,000-yr cycles of Earth's obliquity (tilt). Temporal changes in diversity, as measured by the Shannon- Weiner index, H(S), correlate with independent climate indicators of benthic foraminiferal oxygen-isotope ratios (mainly ice volume) and ostracod Mg:Ca ratios (bottomwater temperature). During glacial periods, H(S) = 0.2-0.6, whereas during interglacials, H(S) = 1.2-1.6, which is three to four times as high. The control of deep-sea benthic diversity by cyclic climate change at timescales of 103-104 yr does not support the stability-time hypothesis because it shows that the deep sea is a temporally dynamic environment. Diversity oscillations reflect large-scale response of the benthic community to climatically driven changes in either thermohaline circulation, bottom temperature (or temperature-related factors) and food, and a coupling of benthic diversity to surface productivity.

  11. Review of Deep-Sea Ecology and Monitoring as They Relate to Deep-Sea Oil and Gas Operations

    SciTech Connect

    Kropp, Roy K.

    2004-01-30

    This review summarizes available information concerning deep-sea benthic ecology and how that information might be used to monitor and eventually reduce the potential impacts resulting from oil and gas production activities. The paper provides a brief overview of deep-sea ecology and benthic faunal groups and summarizes some of the physical and biological features that may be important in evaluating potential impacts. In addition, presented is a synopsis of issues related to the design of a sampling program and a discussion of analytical considerations related to the uncertain knowledge of deep faunas. Also included is an overview of some of the variety of sampling techniques and equipment available to study the deep sea. The review concludes with management considerations and recommendations.

  12. Observations of fauna attending wood and bone deployments from two seamounts on the Southwest Indian Ridge

    NASA Astrophysics Data System (ADS)

    Amon, Diva J.; Copley, Jonathan T.; Dahlgren, Thomas G.; Horton, Tammy; Kemp, Kirsty M.; Rogers, Alex D.; Glover, Adrian G.

    2017-02-01

    The Southwest Indian Ridge is an ultraslow-spreading mid-ocean ridge with numerous poorly-explored seamounts. The benthic fauna of seamounts are thought to be highly heterogeneous, within even small geographic areas. Here we report observations from a two-year opportunistic experiment, which was comprised of two deployments of mango wood and whale bones. One was deployed at 732 m on Coral Seamount ( 32 °S) and the other at 750 m on Atlantis Bank ( 41 °S), two areas with little background faunal knowledge and a significant distance from the continental shelf. The packages mimic natural organic falls, large parcels of food on the deep-sea floor that are important in fulfilling the nutritional needs and providing shelter and substratum for many deep-sea animals. A large number of species colonised the deployments: 69 species at Coral Seamount and 42 species at Atlantis Bank. The two colonising assemblages were different, however, with only 11 species in common. This is suggestive of both differing environmental conditions and potentially, barriers to dispersal between these seamounts. Apart from Xylophaga and Idas bivalves, few organic-fall specialists were present. Several putative new species have been observed, and three new species have been described from the experiments thus far. It is not clear, however, whether this is indicative of high degrees of endemism or simply a result of under-sampling at the regional level.

  13. Light and vision in the deep-sea benthos: II. Vision in deep-sea crustaceans.

    PubMed

    Frank, Tamara M; Johnsen, Sönke; Cronin, Thomas W

    2012-10-01

    Using new collecting techniques with the Johnson-Sea-Link submersible, eight species of deep-sea benthic crustaceans were collected with intact visual systems. Their spectral sensitivities and temporal resolutions were determined shipboard using electroretinography. Useable spectral sensitivity data were obtained from seven species, and in the dark-adapted eyes, the spectral sensitivity peaks were in the blue region of the visible spectrum, ranging from 470 to 497 nm. Under blue chromatic adaptation, a secondary sensitivity peak in the UV portion of the spectrum appeared for two species of anomuran crabs: Eumunida picta (λ(max)363 nm) and Gastroptychus spinifer (λ(max)383 nm). Wavelength-specific differences in response waveforms under blue chromatic adaptation in these two species suggest that two populations of photoreceptor cells are present. Temporal resolution was determined in all eight species using the maximum critical flicker frequency (CFF(max)). The CFF(max) for the isopod Booralana tricarinata of 4 Hz proved to be the lowest ever measured using this technique, and suggests that this species is not able to track even slow-moving prey. Both the putative dual visual pigment system in the crabs and the extremely slow eye of the isopod may be adaptations for seeing bioluminescence in the benthic environment.

  14. Characterization of Deep Sea Fish Gut Bacteria with Antagonistic Potential, from Centroscyllium fabricii (Deep Sea Shark).

    PubMed

    Bindiya, E S; Tina, K J; Raghul, Subin S; Bhat, Sarita G

    2015-06-01

    The bacterial isolates from Centroscyllium fabricii (deep sea shark) gut were screened for antagonistic activity by cross-streak method and disc diffusion assay. This study focuses on strain BTSS-3, which showed antimicrobial activity against pathogenic bacteria including Salmonella Typhimurium, Proteus vulgaris, Clostridium perfringens, Staphylococcus aureus, Bacillus cereus, Bacillus circulans, Bacillus macerans and Bacillus pumilus. BTSS3 was subjected to phenotypic characterization using biochemical tests, SEM imaging, exoenzyme profiling and antibiotic susceptibility tests. Comparative 16S rDNA gene sequence analysis indicated that this strain belonged to the genus Bacillus, with high (98%) similarity to 16S rDNA sequences of Bacillus amyloliquefaciens. The chemical nature of the antibacterial substance was identified by treatment with proteolytic enzymes. The antibacterial activity was reduced by the action of these enzymes pointing out its peptide nature. It was observed from the growth and production kinetics that the bacteriocin was produced in the eighth hour of incubation, i.e., during the mid-log growth phase of the bacteria.

  15. Using near infrared light for deep sea mining observation systems

    NASA Astrophysics Data System (ADS)

    Lu, Huimin; Li, Yujie; Li, Xin; Yang, Jianmin; Serikawa, Seiichi

    2015-10-01

    In this paper, we design a novel deep-sea near infrared light based imaging equipment for deep-sea mining observation systems. The spectral sensitivity peaks are in the red region of the invisible spectrum, ranging from 750nm to 900nm. In addition, we propose a novel underwater imaging model that compensates for the attenuation discrepancy along the propagation path. The proposed model fully considered the effects of absorption, scattering and refraction. We also develop a locally adaptive Laplacian filtering for enhancing underwater transmission map after underwater dark channel prior estimation. Furthermore, we propose a spectral characteristic-based color correction algorithm to recover the distorted color. In water tank experiments, we made a linear scale of eight turbidity steps ranging from clean to heavily scattered by adding deep sea soil to the seawater (from 500 to 2000 mg/L). We compared the results of different turbidity underwater scene, illuminated alternately with near infrared light vs. white light. Experiments demonstrate that the enhanced NIR images have a reasonable noise level after the illumination compensation in the dark regions and demonstrates an improved global contrast by which the finest details and edges are significantly enhanced. We also demonstrate that the effective distance of the designed imaging system is about 1.5 meters, which can meet the requirement of micro-terrain observation around the deep-sea mining systems. Remotely Operated Underwater Vehicle (ROV)-based experiments also certified the effectiveness of the proposed method.

  16. The deep sea is a major sink for microplastic debris

    PubMed Central

    Woodall, Lucy C.; Sanchez-Vidal, Anna; Canals, Miquel; Paterson, Gordon L.J.; Coppock, Rachel; Sleight, Victoria; Calafat, Antonio; Rogers, Alex D.; Narayanaswamy, Bhavani E.; Thompson, Richard C.

    2014-01-01

    Marine debris, mostly consisting of plastic, is a global problem, negatively impacting wildlife, tourism and shipping. However, despite the durability of plastic, and the exponential increase in its production, monitoring data show limited evidence of concomitant increasing concentrations in marine habitats. There appears to be a considerable proportion of the manufactured plastic that is unaccounted for in surveys tracking the fate of environmental plastics. Even the discovery of widespread accumulation of microscopic fragments (microplastics) in oceanic gyres and shallow water sediments is unable to explain the missing fraction. Here, we show that deep-sea sediments are a likely sink for microplastics. Microplastic, in the form of fibres, was up to four orders of magnitude more abundant (per unit volume) in deep-sea sediments from the Atlantic Ocean, Mediterranean Sea and Indian Ocean than in contaminated sea-surface waters. Our results show evidence for a large and hitherto unknown repository of microplastics. The dominance of microfibres points to a previously underreported and unsampled plastic fraction. Given the vastness of the deep sea and the prevalence of microplastics at all sites we investigated, the deep-sea floor appears to provide an answer to the question—where is all the plastic? PMID:26064573

  17. Antarctic marine biodiversity and deep-sea hydrothermal vents.

    PubMed

    Chown, Steven L

    2012-01-01

    The diversity of many marine benthic groups is unlike that of most other taxa. Rather than declining from the tropics to the poles, much of the benthos shows high diversity in the Southern Ocean. Moreover, many species are unique to the Antarctic region. Recent work has shown that this is also true of the communities of Antarctic deep-sea hydrothermal vents. Vent ecosystems have been documented from many sites across the globe, associated with the thermally and chemically variable habitats found around these, typically high temperature, streams that are rich in reduced compounds and polymetallic sulphides. The animal communities of the East Scotia Ridge vent ecosystems are very different to those elsewhere, though the microbiota, which form the basis of vent food webs, show less differentiation. Much of the biological significance of deep-sea hydrothermal vents lies in their biodiversity, the diverse biochemistry of their bacteria, the remarkable symbioses among many of the marine animals and these bacteria, and the prospects that investigations of these systems hold for understanding the conditions that may have led to the first appearance of life. The discovery of diverse and unusual Antarctic hydrothermal vent ecosystems provides opportunities for new understanding in these fields. Moreover, the Antarctic vents south of 60°S benefit from automatic conservation under the Convention on the Conservation of Antarctic Marine Living Resources and the Antarctic Treaty. Other deep-sea hydrothermal vents located in international waters are not protected and may be threatened by growing interests in deep-sea mining.

  18. The deep sea is a major sink for microplastic debris.

    PubMed

    Woodall, Lucy C; Sanchez-Vidal, Anna; Canals, Miquel; Paterson, Gordon L J; Coppock, Rachel; Sleight, Victoria; Calafat, Antonio; Rogers, Alex D; Narayanaswamy, Bhavani E; Thompson, Richard C

    2014-12-01

    Marine debris, mostly consisting of plastic, is a global problem, negatively impacting wildlife, tourism and shipping. However, despite the durability of plastic, and the exponential increase in its production, monitoring data show limited evidence of concomitant increasing concentrations in marine habitats. There appears to be a considerable proportion of the manufactured plastic that is unaccounted for in surveys tracking the fate of environmental plastics. Even the discovery of widespread accumulation of microscopic fragments (microplastics) in oceanic gyres and shallow water sediments is unable to explain the missing fraction. Here, we show that deep-sea sediments are a likely sink for microplastics. Microplastic, in the form of fibres, was up to four orders of magnitude more abundant (per unit volume) in deep-sea sediments from the Atlantic Ocean, Mediterranean Sea and Indian Ocean than in contaminated sea-surface waters. Our results show evidence for a large and hitherto unknown repository of microplastics. The dominance of microfibres points to a previously underreported and unsampled plastic fraction. Given the vastness of the deep sea and the prevalence of microplastics at all sites we investigated, the deep-sea floor appears to provide an answer to the question-where is all the plastic?

  19. Potential biomass in deep-sea hydrothermal vent ecosystem

    NASA Astrophysics Data System (ADS)

    Nakamura, K.; Takai, K.

    2012-12-01

    Since the first discovery of black smoker vents hosting chemosynthetic macrofaunal communities (Spiess et al., 1980), submarine hydrothermal systems and associated biota have attracted interest of many researchers (e.g., Humphris et al., 1995; Van Dover, 2000; Wilcock et al., 2004). In the past couple of decades, particular attention has been paid to chemolithoautotrophic microorganisms that sustain the hydrothermal vent-endemic animal communities as the primary producer. This type of microorganisms obtains energy from inorganic substances (e.g., sulfur, hydrogen, and methane) derived from hydrothermal vent fluids, and is often considered as an important modern analogue to the early ecosystems of the Earth as well as the extraterrestrial life in other planets and moons (e.g., Jannasch and Mottl, 1985; Nealson et al., 2005; Takai et al., 2006). Even today, however, the size of this type of chemosynthetic deep-sea hydrothermal vent ecosystem is largely unknown. Here, we present geophysical and geochemical constraints on potential biomass in the deep-sea hydrothermal vent ecosystem. The estimation of the potential biomass in the deep-sea hydrothermal vent ecosystem is based on hydrothermal fluid flux calculated from heat flux (Elderfield and Schltz, 1996), maximum chemical energy available from metabolic reactions during mixing between hydrothermal vent fluids and seawater (McCollom, 2007), and maintenance energy requirements of the chemolithoautotrophic microorganisms (Hoehler, 2004). The result shows that the most of metabolic energy sustaining the deep-sea hydrothermal vent ecosystem is produced by oxidation reaction of reduced sulfur, although some parts of the energy are derived from hydrogenotrophic and methanotrophic reactions. The overall total of the potential biomass in deep-sea hydrothermal vent ecosystem is calculated to be much smaller than that in terrestrial ecosystems including terrestrial plants. The big difference in biomass between the

  20. Structure, functioning, and cumulative stressors of Mediterranean deep-sea ecosystems

    NASA Astrophysics Data System (ADS)

    Tecchio, Samuele; Coll, Marta; Sardà, Francisco

    2015-06-01

    Environmental stressors, such as climate fluctuations, and anthropogenic stressors, such as fishing, are of major concern for the management of deep-sea ecosystems. Deep-water habitats are limited by primary productivity and are mainly dependent on the vertical input of organic matter from the surface. Global change over the latest decades is imparting variations in primary productivity levels across oceans, and thus it has an impact on the amount of organic matter landing on the deep seafloor. In addition, anthropogenic impacts are now reaching the deep ocean. The Mediterranean Sea, the largest enclosed basin on the planet, is not an exception. However, ecosystem-level studies of response to varying food input and anthropogenic stressors on deep-sea ecosystems are still scant. We present here a comparative ecological network analysis of three food webs of the deep Mediterranean Sea, with contrasting trophic structure. After modelling the flows of these food webs with the Ecopath with Ecosim approach, we compared indicators of network structure and functioning. We then developed temporal dynamic simulations varying the organic matter input to evaluate its potential effect. Results show that, following the west-to-east gradient in the Mediterranean Sea of marine snow input, organic matter recycling increases, net production decreases to negative values and trophic organisation is overall reduced. The levels of food-web activity followed the gradient of organic matter availability at the seafloor, confirming that deep-water ecosystems directly depend on marine snow and are therefore influenced by variations of energy input, such as climate-driven changes. In addition, simulations of varying marine snow arrival at the seafloor, combined with the hypothesis of a possible fishery expansion on the lower continental slope in the western basin, evidence that the trawling fishery may pose an impact which could be an order of magnitude stronger than a climate

  1. Spatial and temporal patterns of genetic variation in the widespread antitropical deep-sea coral Paragorgia arborea.

    PubMed

    Herrera, S; Shank, T M; Sánchez, J A

    2012-12-01

    Numerous deep-sea species have apparent widespread and discontinuous distributions. Many of these are important foundation species, structuring hard-bottom benthic ecosystems. Theoretically, differences in the genetic composition of their populations vary geographically and with depth. Previous studies have examined the genetic diversity of some of these taxa in a regional context, suggesting that genetic differentiation does not occur at scales of discrete features such as seamounts or canyons, but at larger scales (e.g. ocean basins). However, to date, few studies have evaluated such diversity throughout the known distribution of a putative deep-sea species. We utilized sequences from seven mitochondrial gene regions and nuclear genetic variants of the deep-sea coral Paragorgia arborea in a phylogeographic context to examine the global patterns of genetic variation and their possible correlation with the spatial variables of geographic position and depth. We also examined the compatibility of this morphospecies with the genealogical-phylospecies concept by examining specimens collected worldwide. We show that the morphospecies P. arborea can be defined as a genealogical-phylospecies, in contrast to the hypothesis that P. arborea represents a cryptic species complex. Genetic variation is correlated with geographic location at the basin-scale level, but not with depth. Additionally, we present a phylogeographic hypothesis in which P. arborea originates from the North Pacific, followed by colonization of the Southern Hemisphere prior to migration to the North Atlantic. This hypothesis is consistent with the latest ocean circulation model for the Miocene.

  2. Deep-sea diversity patterns are shaped by energy availability.

    PubMed

    Woolley, Skipton N C; Tittensor, Derek P; Dunstan, Piers K; Guillera-Arroita, Gurutzeta; Lahoz-Monfort, José J; Wintle, Brendan A; Worm, Boris; O'Hara, Timothy D

    2016-05-19

    The deep ocean is the largest and least-explored ecosystem on Earth, and a uniquely energy-poor environment. The distribution, drivers and origins of deep-sea biodiversity remain unknown at global scales. Here we analyse a database of more than 165,000 distribution records of Ophiuroidea (brittle stars), a dominant component of sea-floor fauna, and find patterns of biodiversity unlike known terrestrial or coastal marine realms. Both patterns and environmental predictors of deep-sea (2,000-6,500 m) species richness fundamentally differ from those found in coastal (0-20 m), continental shelf (20-200 m), and upper-slope (200-2,000 m) waters. Continental shelf to upper-slope richness consistently peaks in tropical Indo-west Pacific and Caribbean (0-30°) latitudes, and is well explained by variations in water temperature. In contrast, deep-sea species show maximum richness at higher latitudes (30-50°), concentrated in areas of high carbon export flux and regions close to continental margins. We reconcile this structuring of oceanic biodiversity using a species-energy framework, with kinetic energy predicting shallow-water richness, while chemical energy (export productivity) and proximity to slope habitats drive deep-sea diversity. Our findings provide a global baseline for conservation efforts across the sea floor, and demonstrate that deep-sea ecosystems show a biodiversity pattern consistent with ecological theory, despite being different from other planetary-scale habitats.

  3. Deep-sea diversity patterns are shaped by energy availability

    NASA Astrophysics Data System (ADS)

    Woolley, Skipton N. C.; Tittensor, Derek P.; Dunstan, Piers K.; Guillera-Arroita, Gurutzeta; Lahoz-Monfort, José J.; Wintle, Brendan A.; Worm, Boris; O'Hara, Timothy D.

    2016-05-01

    The deep ocean is the largest and least-explored ecosystem on Earth, and a uniquely energy-poor environment. The distribution, drivers and origins of deep-sea biodiversity remain unknown at global scales. Here we analyse a database of more than 165,000 distribution records of Ophiuroidea (brittle stars), a dominant component of sea-floor fauna, and find patterns of biodiversity unlike known terrestrial or coastal marine realms. Both patterns and environmental predictors of deep-sea (2,000-6,500 m) species richness fundamentally differ from those found in coastal (0-20 m), continental shelf (20-200 m), and upper-slope (200-2,000 m) waters. Continental shelf to upper-slope richness consistently peaks in tropical Indo-west Pacific and Caribbean (0-30°) latitudes, and is well explained by variations in water temperature. In contrast, deep-sea species show maximum richness at higher latitudes (30-50°), concentrated in areas of high carbon export flux and regions close to continental margins. We reconcile this structuring of oceanic biodiversity using a species-energy framework, with kinetic energy predicting shallow-water richness, while chemical energy (export productivity) and proximity to slope habitats drive deep-sea diversity. Our findings provide a global baseline for conservation efforts across the sea floor, and demonstrate that deep-sea ecosystems show a biodiversity pattern consistent with ecological theory, despite being different from other planetary-scale habitats.

  4. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 46 Shipping 7 2014-10-01 2014-10-01 false Deep-sea sounding apparatus. 167.40-20 Section 167.40-20... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic...

  5. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 46 Shipping 7 2012-10-01 2012-10-01 false Deep-sea sounding apparatus. 167.40-20 Section 167.40-20... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic...

  6. 46 CFR 167.40-20 - Deep-sea sounding apparatus.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 46 Shipping 7 2013-10-01 2013-10-01 false Deep-sea sounding apparatus. 167.40-20 Section 167.40-20... SHIPS Certain Equipment Requirements § 167.40-20 Deep-sea sounding apparatus. Nautical school ships shall be equipped with an efficient or electronic deep-sea sounding apparatus. The electronic...

  7. 77 FR 35850 - Safety Zone; F/V Deep Sea, Penn Cove, WA

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-15

    ... SECURITY Coast Guard 33 CFR Part 165 RIN 1625-AA00 Safety Zone; F/V Deep Sea, Penn Cove, WA AGENCY: Coast... the Fishing Vessel (F/V) Deep Sea, located in Penn Cove, WA. This action is necessary to ensure the... materials associated with the sunken F/V Deep Sea. B. Basis and Purpose On the evening of May 13, 2012,...

  8. Pelagic communities of the South West Indian Ocean seamounts: R/V Dr Fridtjof Nansen Cruise 2009-410

    NASA Astrophysics Data System (ADS)

    Rogers, A. D.; Alvheim, O.; Bemanaja, E.; Benivary, D.; Boersch-Supan, P.; Bornman, T. G.; Cedras, R.; Du Plessis, N.; Gotheil, S.; Høines, A.; Kemp, K.; Kristiansen, J.; Letessier, T.; Mangar, V.; Mazungula, N.; Mørk, T.; Pinet, P.; Pollard, R.; Read, J.; Sonnekus, T.

    2017-02-01

    The seamounts of the southern Indian Ocean remain some of the most poorly studied globally and yet have been subject to deep-sea fishing for decades and may face new exploitation through mining of seabed massive sulphides in the future. As an attempt to redress the knowledge deficit on deep-sea benthic and pelagic communities associated mainly with the seamounts of the South West Indian Ridge two cruises were undertaken to explore the pelagic and benthic ecology in 2009 and 2011 respectively. In this volume are presented studies on pelagic ecosystems around six seamounts, five on the South West Indian Ridge, including Atlantis Bank, Sapmer Seamount, Middle of What Seamount, Melville Bank and Coral Seamount and one un-named seamount on the Madagascar Ridge. In this paper, existing knowledge on the seamounts of the southwestern Indian Ocean is presented to provide context for the studies presented in this volume. An account of the overall aims, approaches and methods used primarily on the 2009 cruise are presented including metadata associated with sampling and some of the limitations of the study. Sampling during this cruise included physical oceanographic measurements, multibeam bathymetry, biological acoustics, and net sampling of phytoplankton, macrozooplankton and micronekton/nekton. The studies that follow reveal new data on the physical oceanography of this dynamic region of the oceans, and the important influence of water masses on the pelagic ecology associated with the seamounts of the South West Indian Ridge. New information on the pelagic fauna of the region fills an important biogeographic gap for the mid- to high-latitudes of the oceans of the southern hemisphere.

  9. Plastic microfibre ingestion by deep-sea organisms

    NASA Astrophysics Data System (ADS)

    Taylor, M. L.; Gwinnett, C.; Robinson, L. F.; Woodall, L. C.

    2016-09-01

    Plastic waste is a distinctive indicator of the world-wide impact of anthropogenic activities. Both macro- and micro-plastics are found in the ocean, but as yet little is known about their ultimate fate and their impact on marine ecosystems. In this study we present the first evidence that microplastics are already becoming integrated into deep-water organisms. By examining organisms that live on the deep-sea floor we show that plastic microfibres are ingested and internalised by members of at least three major phyla with different feeding mechanisms. These results demonstrate that, despite its remote location, the deep sea and its fragile habitats are already being exposed to human waste to the extent that diverse organisms are ingesting microplastics.

  10. Plastic microfibre ingestion by deep-sea organisms

    PubMed Central

    Taylor, M. L.; Gwinnett, C.; Robinson, L. F.; Woodall, L. C.

    2016-01-01

    Plastic waste is a distinctive indicator of the world-wide impact of anthropogenic activities. Both macro- and micro-plastics are found in the ocean, but as yet little is known about their ultimate fate and their impact on marine ecosystems. In this study we present the first evidence that microplastics are already becoming integrated into deep-water organisms. By examining organisms that live on the deep-sea floor we show that plastic microfibres are ingested and internalised by members of at least three major phyla with different feeding mechanisms. These results demonstrate that, despite its remote location, the deep sea and its fragile habitats are already being exposed to human waste to the extent that diverse organisms are ingesting microplastics. PMID:27687574

  11. The deep-sea hub of the ANTARES neutrino telescope

    NASA Astrophysics Data System (ADS)

    Anghinolfi, M.; Calzas, A.; Dinkespiler, B.; Cuneo, S.; Favard, S.; Hallewell, G.; Jaquet, M.; Musumeci, M.; Papaleo, R.; Raia, G.; Valdy, P.; Vernin, P.

    2006-11-01

    The ANTARES neutrino telescope, currently under construction at 2500 m depth off the French Mediterranean coast, will contain 12 detection lines, powered and read out through a deep-sea junction box (JB) hub. Electrical energy from the shore station is distributed through a transformer with multiple secondary windings and a plugboard with 16 deep sea-mateable electro-optic connectors. Connections are made to the JB outputs using manned or remotely operated submersible vehicles. The triply redundant power management and slow control system is based on two identical AC-powered systems, communicating with the shore through 160 Mb/s fibre G-links and a third battery-powered system using a slower link. We describe the power and slow control systems of the underwater hub.

  12. In Brief: Deep-sea observatory gets undersea cable

    NASA Astrophysics Data System (ADS)

    Zielinski, Sarah

    2007-04-01

    More than 50 kilometers of cable have been buried about a meter beneath the seafloor of Monterey Bay, Calif., to provide power and carry data for the first U.S. deep-sea cabled observatory. When finished later this year, the Monterey Accelerated Research System (MARS) observatory will provide scientists with constant access to any instrumentation, such as seismographs or oceanographic monitoring stations, plugged into its science node. Later this fall, a trawl-resistant frame will be installed at the end of the cable and provide a home for a computer network hub and electrical substation to which instrumentation can be attached. MARS will support oceanographic research within Monterey Bay and provide a testing ground for technology that can be used in future deep-sea observatories. MARS (http://www.mbari.org/mars/) is a multiinstitutional effort led by the Monterey Bay Aquarium Research Institute and funded by the U.S. National Science Foundation.

  13. Antarctic Marine Biodiversity and Deep-Sea Hydrothermal Vents

    PubMed Central

    Chown, Steven L.

    2012-01-01

    The diversity of many marine benthic groups is unlike that of most other taxa. Rather than declining from the tropics to the poles, much of the benthos shows high diversity in the Southern Ocean. Moreover, many species are unique to the Antarctic region. Recent work has shown that this is also true of the communities of Antarctic deep-sea hydrothermal vents. Vent ecosystems have been documented from many sites across the globe, associated with the thermally and chemically variable habitats found around these, typically high temperature, streams that are rich in reduced compounds and polymetallic sulphides. The animal communities of the East Scotia Ridge vent ecosystems are very different to those elsewhere, though the microbiota, which form the basis of vent food webs, show less differentiation. Much of the biological significance of deep-sea hydrothermal vents lies in their biodiversity, the diverse biochemistry of their bacteria, the remarkable symbioses among many of the marine animals and these bacteria, and the prospects that investigations of these systems hold for understanding the conditions that may have led to the first appearance of life. The discovery of diverse and unusual Antarctic hydrothermal vent ecosystems provides opportunities for new understanding in these fields. Moreover, the Antarctic vents south of 60°S benefit from automatic conservation under the Convention on the Conservation of Antarctic Marine Living Resources and the Antarctic Treaty. Other deep-sea hydrothermal vents located in international waters are not protected and may be threatened by growing interests in deep-sea mining. PMID:22235192

  14. Development and Evaluation of Deep-Sea Swimsuit Materials.

    DTIC Science & Technology

    1973-06-01

    great sea depths for long periods of time . Two chemically distinct, flexible, syntactic foams--a Unit-developed, polyurethane, hollow-glass-microsphere...applications in deep-sea environments down to 1000 FSW. Tests showed that both materials were essentially incompressible to depths of 1000 FSW (less than 3...verification of sample thermal-conductivity data. Suit conductivity tests performed on an instrumented copper manikin substantially confirmed the

  15. Controls on the distribution of deep-sea sediments

    NASA Astrophysics Data System (ADS)

    Dutkiewicz, A.; O'Callaghan, S.; Müller, R. D.

    2016-08-01

    Deep-sea sediments represent the largest geological deposit on Earth and provide a record of our planet's response to conditions at the sea surface from where the bulk of material originates. We use a machine learning method to analyze how the distribution of 14,400 deep-sea sediment sample lithologies is connected to bathymetry and surface oceanographic parameters. Our probabilistic Gaussian process classifier shows that the geographic occurrence of five major lithologies in the world's ocean can be predicted using just three parameters. Sea-surface salinity and temperature provide a major control for the growth and composition of plankton and specific ranges are also associated with the influx of non-aerosol terrigenous material into the ocean, while bathymetry is an important parameter for discriminating the occurrence of calcareous sediment, clay and coarse lithogenous sediment from each other. We find that calcareous and siliceous oozes are not linked to high surface productivity. Diatom and radiolarian oozes are associated with low salinities at the surface but with discrete ranges of temperatures, reflecting the diversity of planktonic species in different climatic zones. Biosiliceous sediments cannot be used to infer paleodepth, but are good indicators of paleotemperature and paleosalinity. Our analysis provides a new framework for constraining paleosurface ocean environments from the geological record of deep-sea sediments. It shows that small shifts in salinity and temperature significantly affect the lithology of seafloor sediment. As deep-sea sediments represent the largest carbon sink on Earth these shifts need to be considered in the context of global ocean warming.

  16. Russian deep-sea investigations of Antarctic fauna

    NASA Astrophysics Data System (ADS)

    Malyutina, Marina

    2004-07-01

    A review of the Russian deep-sea investigation of Antarctic fauna beginning from the first scientific collection of Soviet whaling fleet expeditions 1946-1952 is presented. The paper deals with the following expeditions, their main tasks and results. These expeditions include three cruises of research vessel (R.V.) Ob in the Indian sector of the Antarctic and in the Southern Pacific (1955-1958); 11 cruises of the R.V. Akademik Kurchatov in the southern Atlantic (November-December 1971); 16 cruises of the R.V. Dmitriy Mendeleev in the Australia-New Zealand area and adjacent water of the Antarctic (December 1975-March 1976); 43 cruises of the R.V. Akademik Kurchatov in the southern Atlantic (October 1985-February 1986); and 43 cruises of the R.V. Dmitriy Mendeleev in the Atlantic sector of the South Ocean (January-May 1989). A list of the main publications on the benthic taxa collected during these expeditions with data of their distribution is presented. The results of Russian explorations of the Antarctic fauna are presented as theoretical conclusions in the following topics: (1) Vertical zonation in the distribution of the Antarctic deep-sea fauna; (2) Biogeographic division of the abyssal and hadal zones; (3) Origin of the Antarctic deep-sea fauna; (4) Distributional pathways of the Antarctic abyssal fauna through the World Ocean.

  17. Deep-sea smokers: windows to a subsurface biosphere?

    PubMed

    Deming, J W; Baross, J A

    1993-07-01

    Since the discovery of hyperthermophilic microbial activity in hydrothermal fluids recovered from "smoker" vents on the East Pacific Rise, the widely accepted upper temperature limit for life (based on pure culture data) has risen from below the boiling point of water at atmospheric pressure to approximately 115 degrees C. Many microbiologists seem willing to speculate that the maximum may be closer to 150 degrees C. We have postulated not only higher temperatures than these (under deep-sea hydrostatic pressures), but also the existence of a biosphere subsurface to accessible seafloor vents. New geochemical information from the Endeavour Segment of the Juan de Fuca Ridge indicative of subsurface organic material caused us to re-examine both the literature on hyperthermophilic microorganisms cultured from deep-sea smoker environments and recent results of microbial sampling efforts at actively discharging smokers on the Endeavour Segment. Here we offer the case for a subsurface biosphere based on an interdisciplinary view of microbial and geochemical analyses of Endeavour smoker fluids, a case in keeping with rapidly evolving geophysical understanding of organic stability under deep-sea hydrothermal conditions.

  18. Abrupt climate change and collapse of deep-sea ecosystems

    USGS Publications Warehouse

    Yasuhara, Moriaki; Cronin, T. M.; Demenocal, P.B.; Okahashi, H.; Linsley, B.K.

    2008-01-01

    We investigated the deep-sea fossil record of benthic ostracodes during periods of rapid climate and oceanographic change over the past 20,000 years in a core from intermediate depth in the northwestern Atlantic. Results show that deep-sea benthic community "collapses" occur with faunal turnover of up to 50% during major climatically driven oceanographic changes. Species diversity as measured by the Shannon-Wiener index falls from 3 to as low as 1.6 during these events. Major disruptions in the benthic communities commenced with Heinrich Event 1, the Inter-Aller??d Cold Period (IACP: 13.1 ka), the Younger Dryas (YD: 12.9-11.5 ka), and several Holocene Bond events when changes in deep-water circulation occurred. The largest collapse is associated with the YD/IACP and is characterized by an abrupt two-step decrease in both the upper North Atlantic Deep Water assemblage and species diversity at 13.1 ka and at 12.2 ka. The ostracode fauna at this site did not fully recover until ???8 ka, with the establishment of Labrador Sea Water ventilation. Ecologically opportunistic slope species prospered during this community collapse. Other abrupt community collapses during the past 20 ka generally correspond to millennial climate events. These results indicate that deep-sea ecosystems are not immune to the effects of rapid climate changes occurring over centuries or less. ?? 2008 by The National Academy of Sciences of the USA.

  19. Abrupt climate change and collapse of deep-sea ecosystems.

    PubMed

    Yasuhara, Moriaki; Cronin, Thomas M; Demenocal, Peter B; Okahashi, Hisayo; Linsley, Braddock K

    2008-02-05

    We investigated the deep-sea fossil record of benthic ostracodes during periods of rapid climate and oceanographic change over the past 20,000 years in a core from intermediate depth in the northwestern Atlantic. Results show that deep-sea benthic community "collapses" occur with faunal turnover of up to 50% during major climatically driven oceanographic changes. Species diversity as measured by the Shannon-Wiener index falls from 3 to as low as 1.6 during these events. Major disruptions in the benthic communities commenced with Heinrich Event 1, the Inter-Allerød Cold Period (IACP: 13.1 ka), the Younger Dryas (YD: 12.9-11.5 ka), and several Holocene Bond events when changes in deep-water circulation occurred. The largest collapse is associated with the YD/IACP and is characterized by an abrupt two-step decrease in both the upper North Atlantic Deep Water assemblage and species diversity at 13.1 ka and at 12.2 ka. The ostracode fauna at this site did not fully recover until approximately 8 ka, with the establishment of Labrador Sea Water ventilation. Ecologically opportunistic slope species prospered during this community collapse. Other abrupt community collapses during the past 20 ka generally correspond to millennial climate events. These results indicate that deep-sea ecosystems are not immune to the effects of rapid climate changes occurring over centuries or less.

  20. Global deep-sea extinctions during the Pleistocene ice ages

    NASA Astrophysics Data System (ADS)

    Hayward, Bruce W.

    2001-07-01

    The dark, near-freezing environment of the deep oceans is regarded as one of the most stable habitats on Earth, and this stability is generally reflected in the slow turnover rates (extinctions and appearances) of the organisms that live there. By far the best fossil record of deep-sea organisms is provided by the shells of benthic foraminifera (Protista). A little-known global extinction of deep-sea benthic foraminifera occurred during the Pleistocene ice ages. In the southwest Pacific, it caused the disappearance of at least two families, 15 genera, and 48 species (˜15% 25% of the fauna) of dominantly uniserial, elongate foraminifera with distinctive apertural modifications. These forms progressively died back and became extinct during glacial periods in the late Pliocene to middle Pleistocene (ca. 2.5 0.6 Ma); most extinctions occurred between 1.0 and 0.6 Ma, at the time of the middle Pleistocene climatic revolution. This first high-resolution study of this extinction event indicates that it was far more significant for deep-sea diversity loss than previously reported (10 species). The middle Pleistocene extinction was the most dramatic last phase of a worldwide decline in the abundance of these elongate forms, a phase that began during cooling near the Eocene-Oligocene boundary and continued during the middle Miocene. Clearly these taxa declined when the world cooled, but the reason is yet to be resolved.

  1. Late Eocene impact events recorded in deep-sea sediments

    NASA Technical Reports Server (NTRS)

    Glass, B. P.

    1988-01-01

    Raup and Sepkoski proposed that mass extinctions have occurred every 26 Myr during the last 250 Myr. In order to explain this 26 Myr periodicity, it was proposed that the mass extinctions were caused by periodic increases in cometary impacts. One method to test this hypothesis is to determine if there were periodic increases in impact events (based on crater ages) that correlate with mass extinctions. A way to test the hypothesis that mass extinctions were caused by periodic increases in impact cratering is to look for evidence of impact events in deep-sea deposits. This method allows direct observation of the temporal relationship between impact events and extinctions as recorded in the sedimentary record. There is evidence in the deep-sea record for two (possibly three) impact events in the late Eocene. The younger event, represented by the North American microtektite layer, is not associated with an Ir anomaly. The older event, defined by the cpx spherule layer, is associated with an Ir anomaly. However, neither of the two impact events recorded in late Eocene deposits appears to be associated with an unusual number of extinctions. Thus there is little evidence in the deep-sea record for an impact-related mass extinction in the late Eocene.

  2. How Deep-Sea Wood Falls Sustain Chemosynthetic Life

    PubMed Central

    Bienhold, Christina; Pop Ristova, Petra; Wenzhöfer, Frank; Dittmar, Thorsten; Boetius, Antje

    2013-01-01

    Large organic food falls to the deep sea – such as whale carcasses and wood logs – are known to serve as stepping stones for the dispersal of highly adapted chemosynthetic organisms inhabiting hot vents and cold seeps. Here we investigated the biogeochemical and microbiological processes leading to the development of sulfidic niches by deploying wood colonization experiments at a depth of 1690 m in the Eastern Mediterranean for one year. Wood-boring bivalves of the genus Xylophaga played a key role in the degradation of the wood logs, facilitating the development of anoxic zones and anaerobic microbial processes such as sulfate reduction. Fauna and bacteria associated with the wood included types reported from other deep-sea habitats including chemosynthetic ecosystems, confirming the potential role of large organic food falls as biodiversity hot spots and stepping stones for vent and seep communities. Specific bacterial communities developed on and around the wood falls within one year and were distinct from freshly submerged wood and background sediments. These included sulfate-reducing and cellulolytic bacterial taxa, which are likely to play an important role in the utilization of wood by chemosynthetic life and other deep-sea animals. PMID:23301092

  3. Seqestration of dissolved organic carbon in the deep sea

    SciTech Connect

    Daniel J. Repeta

    2006-03-01

    There are 600 GT of dissolved organic carbon (DOC) sequestered in seawater. The marine inventory of DOC is set by its concentration in the deep sea, which is nearly constant at 35+2µM C, irrespective of sample location or depth. Isotopic measurements show deep sea DOC to be depleted in radiocarbon, with an apparent radiocarbon age of between 4000ybp (Atlantic) and 6000ybp (Pacific). From the radiocarbon data, we can infer that deep sea DOC is inert and does not cycle on less than millennial time scales. However, high precision DOC measurements show deep sea concentrations are variable at the + 1-2µM DOC level, suggesting a fraction of deep sea DOC, equivalent to 15-30Gt C, is cycling on short time scales, acting as a sink for new, atmospheric carbon. This project is designed to identify and quantify the biological and physical processes that sequester DOM in the deep sea by making compound specific radiocarbon measurements on sugars and proteins extracted from deep sea DOC. Our Hawaii surface seawater sample has a DIC Δ14C value of 72 + 7 ‰ and shows the influence of bomb radiocarbon on surface water DIC values. HMWDOC Δ14C is 10 ‰, significantly depleted in radiocarbon relative to DIC. Purification of HMWDOC by reverse phase HPLC yields seven neutral sugars with radiocarbon values of 47 – 67‰. Assuming the radiocarbon determinations of individual sugars in HMWDOC serve as replicates, then the average Δ14C for neutral sugars in HMWDOC is 57 + 6 ‰(1 SD, n=11), only slightly depleted in 14C relative to DIC. There has been a sharp decrease in radiocarbon values for DIC in the North Pacific Ocean over the past few decades. If neutral sugars cycle more slowly than DIC, we would expect them to have correspondingly higher radiocarbon values. Previous studies have modeled upper ocean DOC as a two component mixture of newly synthesized DOC with a radiocarbon value equal to DIC, and an old component with a radiocarbon value equal to deep sea DO14C. In order to

  4. Deep Sea Benthic Foraminifera: Love Cold, Fear Warm

    NASA Astrophysics Data System (ADS)

    Thomas, E.

    2007-12-01

    The fossil record provides understanding of possible linkages between long-term environmental changes and evolution of assemblages and morphological species of deep-sea benthic foraminifera, of which the phylogeny is still little known. Deep-sea benthic foraminifera have long morphological species lives and do not commonly suffer massive extinctions: they live in the largest habitat on earth, species have large geographic ranges or are cosmopolitan, and they use motile propagules to rapidly re-populate regions where populations have been destroyed. Extinction occurs only when rapid and severe environmental change affects such a large part of the deep ocean that no refugia exist, even for common species. Deep-sea benthic foraminifera reacted to global cooling (in the earliest Oligocene, middle Miocene and middle Pleistocene) not by extinction, but by a gradual turnover of species. The most extensive turnover occurred in the late Eocene through earliest Oligocene, when some presently important ecological niches were first filled. In contrast, deep-sea benthic foraminifera suffered severe extinction (30-50% of species, including common, cosmopolitan, long-lived species) during the rapid global warming of the Paleocene-Eocene Thermal Maximum (PETM), a time of high CO2 levels and potential ocean acidification. The extinction was followed by slow recovery of faunas, but diversity never returned to pre-extinction levels. The PETM and later, less severe short-term periods of global warming (hyperthermals ETM1 and ETM2) were characterized by low diversity faunas dominated by small, thin-walled individuals. No significant net extinction occurred during the later hyperthermals. Such faunas might reflect dissolution, low oxygen conditions, or blooming of opportunistic species after environmental disturbance. Most commonly cited causes of the PETM extinction are: 1. low oxygen concentrations, 2. acidification of the oceans, 3. increase or decrease in oceanic productivity and

  5. Taxonomic research on deep-sea macrofauna in the South China Sea using the Chinese deep-sea submersible Jiaolong.

    PubMed

    Li, Xinzheng

    2017-01-05

    This paper reviews the taxonomic and biodiversity studies of the deep-sea invertebrates in the South China Sea based on the samples collected by the Chinese manned deep-sea submersible Jiaolong. To date, six new species were described, including the sponges Lophophysema eversa Gong, Li & Qiu, 2014, Saccocalyx microhexactin Gong, Li & Qiu, 2015, and Semperella jiaolongae Gong, Li & Qiu, 2015 as well as the crustaceans Uroptychus jiaolongae Dong & Li, 2015, Uroptychus spinulosus Dong & Li, 2015 and Globospongicola jiaolongi Jiang, Kou & Li, 2015, and some newly recorded species from the South China Sea were reported. The Bathymodiolus platifrons-Shinkaia crosnieri deep-sea cold seep community was reported (Li, 2015), as was the mitochondrial genome of the glass sponge Lophophysema eversa Gong, Li & Qiu, 2014 (Zhang et al., 2015). The population structures of two dominant species, the shrimp Shinkaia crosnieri and the mussel Bathymodiolus platifrons, from the cold seep Bathymodiolus platifrons-Shinkaia crosnieri community in the South China Sea and the hydrothermal vents in the Okinawa Trough, were compared using molecular analysis. The systematic position of the shrimp genus Globospongicola was discussed based on 16S rRNA gene sequences. This article is protected by copyright. All rights reserved.

  6. Ecology and Fisheries: Dark Carbon on Your Dinner Plate.

    PubMed

    Petersen, Jillian M

    2016-12-19

    Chemosynthetic primary production by symbiotic microbes powers entire ecosystems in the remote deep sea. New research shows that in shallow waters chemosynthetic symbioses can contribute substantially to a vital economic resource - lobster fisheries in the Caribbean Sea.

  7. Exploitation of deep-sea resources: the urgent need to understand the role of high pressure in the toxicity of chemical pollutants to deep-sea organisms.

    PubMed

    Mestre, Nélia C; Calado, Ricardo; Soares, Amadeu M V M

    2014-02-01

    The advent of industrial activities in the deep sea will inevitably expose deep-sea organisms to potentially toxic compounds. Although international regulations require environmental risk assessment prior to exploitation activities, toxicity tests remain focused on shallow-water model species. Moreover, current tests overlook potential synergies that may arise from the interaction of chemicals with natural stressors, such as the high pressures prevailing in the deep sea. As pressure affects chemical reactions and the physiology of marine organisms, it will certainly affect the toxicity of pollutants arising from the exploitation of deep-sea resources. We emphasize the need for environmental risk assessments based on information generated from ecotoxicological trials that mimic, as close as possible, the deep-sea environment, with emphasis to a key environmental factor - high hydrostatic pressure.

  8. First glimpse into Lower Jurassic deep-sea biodiversity: in situ diversification and resilience against extinction.

    PubMed

    Thuy, Ben; Kiel, Steffen; Dulai, Alfréd; Gale, Andy S; Kroh, Andreas; Lord, Alan R; Numberger-Thuy, Lea D; Stöhr, Sabine; Wisshak, Max

    2014-07-07

    Owing to the assumed lack of deep-sea macrofossils older than the Late Cretaceous, very little is known about the geological history of deep-sea communities, and most inference-based hypotheses argue for repeated recolonizations of the deep sea from shelf habitats following major palaeoceanographic perturbations. We present a fossil deep-sea assemblage of echinoderms, gastropods, brachiopods and ostracods, from the Early Jurassic of the Glasenbach Gorge, Austria, which includes the oldest known representatives of a number of extant deep-sea groups, and thus implies that in situ diversification, in contrast to immigration from shelf habitats, played a much greater role in shaping modern deep-sea biodiversity than previously thought. A comparison with coeval shelf assemblages reveals that, at least in some of the analysed groups, significantly more extant families/superfamilies have endured in the deep sea since the Early Jurassic than in the shelf seas, which suggests that deep-sea biota are more resilient against extinction than shallow-water ones. In addition, a number of extant deep-sea families/superfamilies found in the Glasenbach assemblage lack post-Jurassic shelf occurrences, implying that if there was a complete extinction of the deep-sea fauna followed by replacement from the shelf, it must have happened before the Late Jurassic.

  9. Deep-sea benthic footprint of the deepwater horizon blowout.

    PubMed

    Montagna, Paul A; Baguley, Jeffrey G; Cooksey, Cynthia; Hartwell, Ian; Hyde, Larry J; Hyland, Jeffrey L; Kalke, Richard D; Kracker, Laura M; Reuscher, Michael; Rhodes, Adelaide C E

    2013-01-01

    The Deepwater Horizon (DWH) accident in the northern Gulf of Mexico occurred on April 20, 2010 at a water depth of 1525 meters, and a deep-sea plume was detected within one month. Oil contacted and persisted in parts of the bottom of the deep-sea in the Gulf of Mexico. As part of the response to the accident, monitoring cruises were deployed in fall 2010 to measure potential impacts on the two main soft-bottom benthic invertebrate groups: macrofauna and meiofauna. Sediment was collected using a multicorer so that samples for chemical, physical and biological analyses could be taken simultaneously and analyzed using multivariate methods. The footprint of the oil spill was identified by creating a new variable with principal components analysis where the first factor was indicative of the oil spill impacts and this new variable mapped in a geographic information system to identify the area of the oil spill footprint. The most severe relative reduction of faunal abundance and diversity extended to 3 km from the wellhead in all directions covering an area about 24 km(2). Moderate impacts were observed up to 17 km towards the southwest and 8.5 km towards the northeast of the wellhead, covering an area 148 km(2). Benthic effects were correlated to total petroleum hydrocarbon, polycyclic aromatic hydrocarbons and barium concentrations, and distance to the wellhead; but not distance to hydrocarbon seeps. Thus, benthic effects are more likely due to the oil spill, and not natural hydrocarbon seepage. Recovery rates in the deep sea are likely to be slow, on the order of decades or longer.

  10. Radiocarbon Based Ages and Growth Rates: Hawaiian Deep Sea Corals

    SciTech Connect

    Roark, E B; Guilderson, T P; Dunbar, R B; Ingram, B L

    2006-01-13

    The radial growth rates and ages of three different groups of Hawaiian deep-sea 'corals' were determined using radiocarbon measurements. Specimens of Corallium secundum, Gerardia sp., and Leiopathes glaberrima, were collected from 450 {+-} 40 m at the Makapuu deep-sea coral bed using a submersible (PISCES V). Specimens of Antipathes dichotoma were collected at 50 m off Lahaina, Maui. The primary source of carbon to the calcitic C. secundum skeleton is in situ dissolved inorganic carbon (DIC). Using bomb {sup 14}C time markers we calculate radial growth rates of {approx} 170 {micro}m y{sup -1} and ages of 68-75 years on specimens as tall as 28 cm of C. secundum. Gerardia sp., A. dichotoma, and L. glaberrima have proteinaceous skeletons and labile particulate organic carbon (POC) is their primary source of architectural carbon. Using {sup 14}C we calculate a radial growth rate of 15 {micro}m y{sup -1} and an age of 807 {+-} 30 years for a live collected Gerardia sp., showing that these organisms are extremely long lived. Inner and outer {sup 14}C measurements on four sub-fossil Gerardia spp. samples produce similar growth rate estimates (range 14-45 {micro}m y{sup -1}) and ages (range 450-2742 years) as observed for the live collected sample. Similarly, with a growth rate of < 10 {micro}m y{sup -1} and an age of {approx}2377 years, L. glaberrima at the Makapuu coral bed, is also extremely long lived. In contrast, the shallow-collected A. dichotoma samples yield growth rates ranging from 130 to 1,140 {micro}m y{sup -1}. These results show that Hawaiian deep-sea corals grow more slowly and are older than previously thought.

  11. Reduced enzymatic antioxidative defense in deep-sea fish.

    PubMed

    Janssens, B J; Childress, J J; Baguet, F; Rees, J F

    2000-12-01

    Oxygen, while being an obligate fuel for aerobic life, has been shown to be toxic through its deleterious reactive species, which can cause oxidative stress and lead ultimately to cell and organism death. In marine organisms, reactive oxygen species (ROS), such as the superoxide anion and hydrogen peroxide, are generated within respiring cells and tissues and also by photochemical processes in sea water. Considering both the reduced metabolic rate of nektonic organisms thriving in the deep sea and the physico-chemical conditions of this dark, poorly oxygenated environment, the meso- and bathypelagic waters of the oceans might be considered as refuges against oxidative dangers. This hypothesis prompted us to investigate the activities of the three essential enzymes (superoxide dismutase, SOD; catalase, CAT; glutathione peroxidase, GPX) constitutive of the antioxidative arsenal of cells in the tissues of 16 species of meso- and bathypelagic fishes occurring between the surface and a depth of 1300 m. While enzymatic activities were detected in all tissues from all species, the levels of SOD and GPX decreased in parallel with the exponential reduction in the metabolic activity as estimated by citrate synthase activity. In contrast, CAT was affected neither by the metabolic activity nor by the depth of occurrence of the fishes. High levels of metabolic and antioxidative enzymes were detected in the light organs of bioluminescent species. The adjustment of the activity of SOD and GPX to the decreased metabolic activity associated with deep-sea living suggests that these antioxidative defense mechanisms are used primarily against metabolically produced ROS, whereas the maintenance of CAT activity throughout all depths could be indicative of another role. The possible reasons for the occurrence of such a reduced antioxidative arsenal in deep-sea species are discussed.

  12. Deep-Sea Benthic Footprint of the Deepwater Horizon Blowout

    PubMed Central

    Montagna, Paul A.; Baguley, Jeffrey G.; Cooksey, Cynthia; Hartwell, Ian; Hyde, Larry J.; Hyland, Jeffrey L.; Kalke, Richard D.; Kracker, Laura M.; Reuscher, Michael; Rhodes, Adelaide C. E.

    2013-01-01

    The Deepwater Horizon (DWH) accident in the northern Gulf of Mexico occurred on April 20, 2010 at a water depth of 1525 meters, and a deep-sea plume was detected within one month. Oil contacted and persisted in parts of the bottom of the deep-sea in the Gulf of Mexico. As part of the response to the accident, monitoring cruises were deployed in fall 2010 to measure potential impacts on the two main soft-bottom benthic invertebrate groups: macrofauna and meiofauna. Sediment was collected using a multicorer so that samples for chemical, physical and biological analyses could be taken simultaneously and analyzed using multivariate methods. The footprint of the oil spill was identified by creating a new variable with principal components analysis where the first factor was indicative of the oil spill impacts and this new variable mapped in a geographic information system to identify the area of the oil spill footprint. The most severe relative reduction of faunal abundance and diversity extended to 3 km from the wellhead in all directions covering an area about 24 km2. Moderate impacts were observed up to 17 km towards the southwest and 8.5 km towards the northeast of the wellhead, covering an area 148 km2. Benthic effects were correlated to total petroleum hydrocarbon, polycyclic aromatic hydrocarbons and barium concentrations, and distance to the wellhead; but not distance to hydrocarbon seeps. Thus, benthic effects are more likely due to the oil spill, and not natural hydrocarbon seepage. Recovery rates in the deep sea are likely to be slow, on the order of decades or longer. PMID:23950956

  13. Deep sea AUV navigation using multiple acoustic beacons

    NASA Astrophysics Data System (ADS)

    Ji, Da-xiong; Song, Wei; Zhao, Hong-yu; Liu, Jian

    2016-04-01

    Navigation is a critical requirement for the operation of Autonomous Underwater Vehicles (AUVs). To estimate the vehicle position, we present an algorithm using an extended Kalman filter (EKF) to integrate dead-reckoning position with acoustic ranges from multiple beacons pre-deployed in the operating environment. Owing to high latency, variable sound speed multipath transmissions and unreliability in acoustic measurements, outlier recognition techniques are proposed as well. The navigation algorithm has been tested by the recorded data of deep sea AUV during field operations in a variety of environments. Our results show the improved performance over prior techniques based on position computation.

  14. Space Suit Technologies Protect Deep-Sea Divers

    NASA Technical Reports Server (NTRS)

    2008-01-01

    Working on NASA missions allows engineers and scientists to hone their skills. Creating devices for the high-stress rigors of space travel pushes designers to their limits, and the results often far exceed the original concepts. The technologies developed for the extreme environment of space are often applicable here on Earth. Some of these NASA technologies, for example, have been applied to the breathing apparatuses worn by firefighters, the fire-resistant suits worn by racecar crews, and, most recently, the deep-sea gear worn by U.S. Navy divers.

  15. Meteoroid ablation spheres from deep-sea sediments

    NASA Technical Reports Server (NTRS)

    Blanchard, M. B.; Brownlee, D. E.; Bunch, T. E.; Hodge, P. W.; Kyte, F. T.

    1980-01-01

    The paper deals with an examination of spheres that are magnetically extracted from mid-Pacific abyssal clays that are up to half a million years old. The spheres are divided into three groups using their dominant mineralogy - namely, iron, glassy, and silicate. Most spheres were formed from particles that completely melted as they separated from their parent meteoroids during the ablation process. It is concluded that the mineralogy and composition of the deep-sea spheres are identical in many respects to the meteorite fusion crusts, laboratory-created ablation debris, and the ablated interplanetary dust particles in the stratospheric collection.

  16. Paleoceanographic implications of Miocene deep-sea hiatuses.

    USGS Publications Warehouse

    Keller, G.; Barron, J.A.

    1983-01-01

    Miocene paleoceanographic evolution exhibits major changes resulting from the opening and closing of passages, the subsequent changes in oceanic circulation, and development of major Antarctic glaciation. The consequences and timing of these events can be observed in variations in the distribution of deep-sea hiatuses, sedimentation patterns, and biogeographic distribution of planktic organisms. The main aspects of the present oceanic circulation system and sediment distribution pattern were established by 13.5 to 12.5 Ma (hiatus NH 3), coincident with the establishment of a major East Antarctic ice cap. -from Authors

  17. Deep-Sea Mining: Integrating Geology, Oceanography, and Engineering

    NASA Astrophysics Data System (ADS)

    Meyer, F. Michael; Halbach, Peter E.; Martens, Peer N.; Hein, James R.; Scott, Steve

    2008-09-01

    Shaping the Future: Deep-Sea Minerals and Mining Congress; Aachen, Germany, 9-13 March 2008; A strong increase in the global demand for metallic raw materials, coupled with rising market prices, has heightened interest in marine seabed mineral deposits and the feasibility of their extraction for many marine scientists, engineers, and mining companies. This interest focuses not only on base and precious metals but also on strategically important elements needed for high-technology applications, such as cobalt, nickel, molybdenum, titanium, gallium, selenium, telurium, indium, and the rare earth elements.

  18. Migrations and growth of deep-sea lobsters, Homarus americanus.

    PubMed

    Cooper, R A; Uzmann, J R

    1971-01-22

    In distinct contrast to the restricted movements of coastal stocks of lobsters (Homarus americanus), those inhabiting the outer continental shelf undertake extensive seasonal migrations. Of 5710 tagged lobsters released on the outer continental shelf off New England from April 1968 to June 1969, 400 had been recaptured by April 1970. The distribution of the recoveries demonstrated shoalward migration in spring and summer and a return to the edge of the shelf in fall and winter. Deep-sea lobsters have a faster rate of growth than coastal lobsters; growth increments at molting and the frequency of molting are greater.

  19. Igneous rocks of Arctic Ocean deep sea ridges: new data on petrology, geochemistry and geochronology

    NASA Astrophysics Data System (ADS)

    Petrov, Oleg; Morozov, Andrey; Shokalsky, Sergey; Sobolev, Nikolay; Kashubin, Sergey; Shevchenko, Sergey; Sergeev, Sergey; Belyatsky, Boris; Shatov, Vitaly; Petrov, Eugeny

    2015-04-01

    The aggregate results of studies of igneous rocks, collected from the central part of the Arctic Ocean during scientific marine expeditions «Arctic-2000, 2005, 2007 and 2012» are presented and discussed in the frame of modern understanding of High Polar Arctic tectonic constraint. Petrological, geochemical and isotope-geochronological studies of more than 500 samples have shown that the sedimentary rocks are of dominated population among the rock fragments dredged from deep-sea bottom, and represented by metamorphosed dolomite and quartz sandstone, limestone, sometimes with the Devonian - Permian fauna. Igneous rocks are 10-15% only (Archean and Paleoproterozoic gneissouse granites and gabbro, Neoproterozoic dolerite) and metamorphic rocks (green shales, metabasites, gneisses). Apparently, these rocks are part of the acoustic basement underlying the Late Mesozoic - Cenozoic layered loose sediments. In addition to the dredged fragments of the ancient mafic rocks, some samples were taken as a core during deep-water drilling in the northern and southern slopes of the Mendeleev Ridge and represented by trachybasalts, marking the border of Late-Cenozoic deposit cover and acoustic basement and quite similar in composition to those of Early-Late Cretaceous basalts form northward of the Chukchi Plateau seamounts, Alpha Ridge, Franz Josef Land, De Long islands and other parts of the large igneous province of the High Arctic (HALIP). Video-filming of Mendeleev Ridge escarps proofs the existing of rock outcrops and supports local origin of most of the rock fragments found in the sampling areas. Thus the continental type of the earth's crust of the Central Arctic Ridges basement is based on all obtained results of our study of sea-bottom excavated rock material.

  20. Stable isotopic composition of deep sea gorgonian corals (Primnoa spp.): a new archive of surface processes.

    SciTech Connect

    Sherwood, O A; Heikoop, J M; Scott, D B; Risk, M J; Guilderson, T P; McKinney, R A

    2005-02-03

    The deep-sea gorgonian coral Primnoa spp. lives in the Atlantic and Pacific Oceans at depths of 65-3200 m. This coral has an arborescent growth form with a skeletal axis composed of annual rings made from calcite and gorgonin. It has a lifespan of at least several hundred years. It has been suggested that isotopic profiles from the gorgonin fraction of the skeleton could be used to reconstruct long-term, annual-scale variations in surface productivity. We tested assumptions about the trophic level, intra-colony isotopic reproducibility, and preservation of isotopic signatures in a suite of modern and fossil specimens. Measurements of gorgonin {Delta}{sup 14}C and {delta}{sup 15}N indicate that Primnoa spp. feed mainly on zooplankton and/or sinking particulate organic matter (POM{sub SINK}), and not on suspended POM (POM{sub SUSP}) or dissolved organic carbon (DOC). Gorgonin {delta}{sup 13}C and {delta}{sup 15}N in specimens from NE Pacific shelf waters, NW Atlantic slope waters, the Sea of Japan, and a South Pacific (Southern Ocean sector) seamount were strongly correlated with Levitus 1994 surface apparent oxygen utilization (AOU; the best available measure of surface productivity), demonstrating coupling between skeletal isotopic ratios and biophysical processes in surface water. Time-series isotopic profiles from different sections along the same colony were identical for {delta}{sup 13}C, while {delta}{sup 15}N profiles became more dissimilar with increasing separation along the colony axis. Similarity in C:N, {delta}{sup 13}C and {delta}{sup 15}N between modern and fossil specimens suggest that isotopic signatures are preserved over millennial timescales. Finally, the utility of this new archive was demonstrated by reconstruction of 20th century bomb radiocarbon.

  1. Morphological, molecular, and in situ behavioral observations of the rare deep-sea anglerfish Chaunacops coloratus (Garman, 1899), order Lophiiformes, in the eastern North Pacific

    NASA Astrophysics Data System (ADS)

    Lundsten, Lonny; Johnson, Shannon B.; Cailliet, Gregor M.; DeVogelaere, Andrew P.; Clague, David A.

    2012-10-01

    In situ observations and collections of Chaunacops coloratus (Garman, 1899) from seamounts in the eastern North Pacific Ocean lend new behavioral, morphological and molecular data to an under-sampled, deep-sea group of fishes in the order Lophiiformes. Seven observations were made at Davidson Seamount, 130 km southwest of Monterey, CA, and from the Taney Seamount chain, 290 km west of Moss Landing, CA, from depths ranging from 2313 to 3297 m. Specimens were collected at both locations. Morphometric and meristic analyses were performed to identify individuals to the species level. These observations of C. coloratus provide greater latitude and depth distributions in the eastern North Pacific Ocean than previously known. Detailed habitat information indicated the fish occurred near manganese-encrusted volcanic talus slopes, a highly rugose habitat. Video observations revealed possible ontogenetic color changes in which small fish were blue and large fish were red. Video recorded rapid, vertical swimming as an escape response and maneuvering, or walking, with pectoral and pelvic fins and esca deployment. Phylogenetic analyses used here verify what has been known since Garman first described C. coloratus in 1899, that Chaunax and Chaunacops are closely related; molecular tools complement previous knowledge and genetic information created has been submitted to GenBank for further use by the scientific community.

  2. Novel and diverse integron integrase genes and integron-like gene cassettes are prevalent in deep-sea hydrothermal vents.

    PubMed

    Elsaied, Hosam; Stokes, H W; Nakamura, Takamichi; Kitamura, Keiko; Fuse, Hiroyuki; Maruyama, Akihiko

    2007-09-01

    The lack of information about mobile DNA in deep-sea hydrothermal vents limits our understanding of the phylogenetic diversity of the mobile genome of bacteria in these environments. We used culture-independent techniques to explore the diversity of the integron/mobile gene cassette system in a variety of hydrothermal vent communities. Three samples, which included two different hydrothermal vent fluids and a mussel species that contained essentially monophyletic sulfur-oxidizing bacterial endosymbionts, were collected from Suiyo Seamount, Izu-Bonin, Japan, and Pika site, Mariana arc. First, using degenerate polymerase chain reaction (PCR) primers, we amplified integron integrase genes from metagenomic DNA from each sample. From vent fluids, we discovered 74 new integrase genes that were classified into 11 previously undescribed integron classes. One integrase gene was recorded in the mussel symbiont and was phylogenetically distant from those recovered from vent fluids. Second, using PCR primers targeting the gene cassette recombination site (59-be), we amplified and subsequently identified 60 diverse gene cassettes. In multicassette amplicons, a total of 13 59-be sites were identified. Most of these sites displayed features that were atypical of the features previously well conserved in this family. The Suiyo vent fluid was characterized by gene cassette open reading frames (ORFs) that had significant homologies with transferases, DNA-binding proteins and metal transporter proteins, while the majority of Pika vent fluid gene cassettes contained novel ORFs with no identifiable homologues in databases. The symbiont gene cassette ORFs were found to be matched with DNA repair proteins, methionine aminopeptidase, aminopeptidase N, O-sialoglycoprotein endopeptidase and glutamate synthase, which are proteins expected to play a role in animal/symbiont metabolism. The success of this study indicates that the integron/gene cassette system is common in deep-sea hydrothermal

  3. Global ocean conveyor lowers extinction risk in the deep sea

    USGS Publications Warehouse

    Henry, Lea-Anne; Frank, Norbert; Hebbeln, Dierk; Weinberg, Claudia; Robinson, Laura; van de Flierdt, Tina; Dahl, Mikael; Douarin, Melanie; Morrison, Cheryl; Correa, Matthias Lopez; Rogers, Alex D.; Ruckelshausen, Mario; Roberts, J. Murray

    2014-01-01

    General paradigms of species extinction risk are urgently needed as global habitat loss and rapid climate change threaten Earth with what could be its sixth mass extinction. Using the stony coral Lophelia pertusa as a model organism with the potential for wide larval dispersal, we investigated how the global ocean conveyor drove an unprecedented post-glacial range expansion in Earth׳s largest biome, the deep sea. We compiled a unique ocean-scale dataset of published radiocarbon and uranium-series dates of fossil corals, the sedimentary protactinium–thorium record of Atlantic meridional overturning circulation (AMOC) strength, authigenic neodymium and lead isotopic ratios of circulation pathways, and coral biogeography, and integrated new Bayesian estimates of historic gene flow. Our compilation shows how the export of Southern Ocean and Mediterranean waters after the Younger Dryas 11.6 kyr ago simultaneously triggered two dispersal events in the western and eastern Atlantic respectively. Each pathway injected larvae from refugia into ocean currents powered by a re-invigorated AMOC that led to the fastest postglacial range expansion ever recorded, covering 7500 km in under 400 years. In addition to its role in modulating global climate, our study illuminates how the ocean conveyor creates broad geographic ranges that lower extinction risk in the deep sea.

  4. Deep-sea Hexactinellida (Porifera) of the Weddell Sea

    NASA Astrophysics Data System (ADS)

    Janussen, Dorte; Tabachnick, Konstantin R.; Tendal, Ole S.

    2004-07-01

    New Hexactinellida from the deep Weddel Sea are described. This moderately diverse hexactinellid fauna includes 14 species belonging to 12 genera, of which five species and one subgenus are new to science: Periphragella antarctica n. sp., Holascus pseudostellatus n. sp., Caulophacus (Caulophacus) discohexactinus n. sp., C. ( Caulodiscus) brandti n. sp., C. ( Oxydiscus) weddelli n. sp., and C. ( Oxydiscus) n. subgen. So far, 20 hexactinellid species have been reported from the deep Weddell Sea, 15 are known from the northern part and 10 only from here, while 10 came from the southern area, and five of these only from there. However, this apparent high "endemism" of Antarctic hexactinellid sponges is most likely the result of severe undersampling of the deep-sea fauna. We find no reason to believe that a division between an oceanic and a more continental group of species exists. The current poor database indicates that a substantial part of the deep hexactinellid fauna of the Weddell Sea is shared with other deep-sea regions, but it does not indicate a special biogeographic relationship with any other ocean.

  5. Amphipods on a deep-sea hydrothermal treadmill

    NASA Astrophysics Data System (ADS)

    Kaartvedt, S.; Van Dover, C. L.; Mullineaux, L. S.; Wiebe, P. H.; Bollens, S. M.

    1994-01-01

    Conspicuous swarms of a pardaliscid amphipod were observed at about 2520 and 2580 m depth in the East Pacific Rise vent field during dives with the submersible Alvin. Swarms occurred in association with mussels, clams and tubeworms, and were located above, and immediately downstream of cracks with emanating hydrothermal water. Numerical density sometimes exceeded 1000 individuals 1 -1, which is 3 orders of magnitude greater than any previous report on pelagic crustaceans from the deep sea. The amphipods, however, were not obligatory swarmers, and thin-layered shoals and scattered individuals were observed. Orientation of individuals was often polarized as they headed into the venting flow, swimming vigorously at 5-10 cm s -1 to maintain their position in the current. Retention within the preferred habitat requires an average swimming speed corresponding to the average current speed, suggesting a sustained swimming of > 10 body lengths s -1. These observations contrast with the general concept of low swimming activity in deep-sea crustaceans.

  6. Symbioses of methanotrophs and deep-sea mussels (Mytilidae: Bathymodiolinae).

    PubMed

    DeChaine, Eric G; Cavanaugh, Colleen M

    2006-01-01

    The symbioses between invertebrates and chemosynthetic bacteria allow both host and symbiont to colonize and thrive in otherwise inhospitable deep-sea habitats. Given the global distribution of the bathymodioline symbioses, this association is an excellent model for evaluating co-speciation and evolution of symbioses. Thus far, the methanotroph and chemoautotroph endosymbionts of mussels are tightly clustered within two independent clades of gamma Proteobacteria, respectively. Further physiological and genomic studies will elucidate the ecological and evolutionary roles that these bacterial clades play in the symbiosis and chemosynthetic community. Due to the overall abundance of the methanotrophic symbioses at hydrothermal vents and hydrocarbon seeps, they likely play a significant, but as of yet unquantified, role in the biogeochemical cycling of methane. With this in mind, the search for methanotrophic symbioses should not be restricted to these known deep-sea habitats, but rather should be expanded to include methane-rich coastal marine and freshwater environments inhabited by methanotrophs and bivalves. Our current understanding of the bathymodioline symbioses provides a strong foundation for future explorations into the origin, ecology, and evolution of methanotroph symbioses, which are now becoming possible through a combination of classical and advanced molecular techniques.

  7. Deep sea mega-geomorphology: Progress and problems

    NASA Technical Reports Server (NTRS)

    Bryan, W. B.

    1985-01-01

    Historically, marine geologists have always worked with mega-scale morphology. This is a consequence both of the scale of the ocean basins and of the low resolution of the observational remote sensing tools available until very recently. In fact, studies of deep sea morphology have suffered from a serious gap in observational scale. Traditional wide-beam echo sounding gave images on a scale of miles, while deep sea photography has been limited to scales of a few tens of meters. Recent development of modern narrow-beam echo sounding coupled with computer-controlled swath mapping systems, and development of high-resolution deep-towed side-scan sonar, are rapidly filling in the scale gap. These technologies also can resolve morphologic detail on a scale of a few meters or less. As has also been true in planetary imaging projects, the ability to observe phenomena over a range of scales has proved very effective in both defining processes and in placing them in proper context.

  8. Rhone deep-sea fan: morphostructure and growth pattern

    SciTech Connect

    Droz, L.; Bellaiche, G.

    1985-03-01

    A detailed bathymetric survey of the Rhone deep-sea fan and its feeder canyon using Sea-Beam, reveals morphologic features such as very tight meanders of the canyon and channel courses, cutoff meanders, and downslope narrowing of the inner channel floor. Striking similarities exist between these deep-sea features and some continental landforms, especially in alluvial plain areas or desert environments. Sea-Beam also reveals evidence of huge slump scars affecting the slope and fan. The superficial structure of the Rhone Fan results from the stacking of numerous lenticular acoustic units displaying specific seismic characters in which the authors recognized channel and levee facies. Except in the upper fan area, these units have not been constant; they have generally migrated, owing to shifting of the channel throughout fan evolution. Construction of the fan probably began as early as the early Pliocene and continued to the close of the Wurmian (late Wisconsinian). The fan's growth pattern could be associated with climatic fluctuations. The principal sedimentary mechanism responsible for the growth of the fan appears to be turbidity currents, but mass gravity flows have also been an important factor in building the fan by occasionally blocking the main channel and forcing it to migrate.

  9. Activity rhythms in the deep-sea: a chronobiological approach.

    PubMed

    Aguzzi, Jacopo; Company, Joan Batista; Costa, Corrado; Menesatti, Paolo; Garcia, Jose Antonio; Bahamon, Nixon; Puig, Pere; Sarda, Francesc

    2011-01-01

    Ocean waters deeper than 200 m cover 70% of the Earth's surface. Light intensity gets progressively weaker with increasing depth and internal tides or inertial currents may be the only remaining zeitgebers regulating biorhythms in deep-sea decapods. Benthopelagic coupling, exemplified by vertically moving shrimps within the water column, may also act as a source of indirect synchronisation to the day-night cycle for species living in permanently dark areas. At the same time, seasonal rhythms in growth and reproduction may be an exogenous response to spring-summer changes in upper layer productivity (via phytoplankton) or, alternatively, may be provoked by the synchronisation mediated by an endogenous controlling mechanism (via melatonin). In our review, we will focus on the behavioural rhythms of crustacean decapods inhabiting depths where the sun light is absent. Potential scenarios for future research on deep-sea decapod behaviour are suggested by new in situ observation technologies. Permanent video observatories are, to date, one of the most important tools for marine chronobiology in terms of species recognition and animals' movement tracking.

  10. Global ocean conveyor lowers extinction risk in the deep sea

    NASA Astrophysics Data System (ADS)

    Henry, Lea-Anne; Frank, Norbert; Hebbeln, Dierk; Wienberg, Claudia; Robinson, Laura; van de Flierdt, Tina; Dahl, Mikael; Douarin, Mélanie; Morrison, Cheryl L.; López Correa, Matthias; Rogers, Alex D.; Ruckelshausen, Mario; Roberts, J. Murray

    2014-06-01

    General paradigms of species extinction risk are urgently needed as global habitat loss and rapid climate change threaten Earth with what could be its sixth mass extinction. Using the stony coral Lophelia pertusa as a model organism with the potential for wide larval dispersal, we investigated how the global ocean conveyor drove an unprecedented post-glacial range expansion in Earth's largest biome, the deep sea. We compiled a unique ocean-scale dataset of published radiocarbon and uranium-series dates of fossil corals, the sedimentary protactinium-thorium record of Atlantic meridional overturning circulation (AMOC) strength, authigenic neodymium and lead isotopic ratios of circulation pathways, and coral biogeography, and integrated new Bayesian estimates of historic gene flow. Our compilation shows how the export of Southern Ocean and Mediterranean waters after the Younger Dryas 11.6 kyr ago simultaneously triggered two dispersal events in the western and eastern Atlantic respectively. Each pathway injected larvae from refugia into ocean currents powered by a re-invigorated AMOC that led to the fastest postglacial range expansion ever recorded, covering 7500 km in under 400 years. In addition to its role in modulating global climate, our study illuminates how the ocean conveyor creates broad geographic ranges that lower extinction risk in the deep sea.

  11. Enhanced bioaccumulation of mercury in deep-sea fauna from the Bay of Biscay (north-east Atlantic) in relation to trophic positions identified by analysis of carbon and nitrogen stable isotopes

    NASA Astrophysics Data System (ADS)

    Chouvelon, T.; Spitz, J.; Caurant, F.; Mèndez-Fernandez, P.; Autier, J.; Lassus-Débat, A.; Chappuis, A.; Bustamante, P.

    The Bay of Biscay (north-east Atlantic) is an open marine ecosystem of particular concern in current European environmental policies. Indeed, it supports both a high biological diversity and numerous anthropogenic activities such as important fisheries. For the first time, stable isotope analyses (SIA) of carbon and nitrogen and analysis of total mercury (T-Hg) concentrations in the muscle (edible flesh) were performed on adult stages of a wide range of species (i.e., 120 species) from various taxa and various habitats of this ecosystem. Concentrations of this non-essential metal, toxic to all living organisms, ranged from 39 to 5074 ng g-1 dry weight. Calculations of species' trophic positions (TPs) through SIA revealed a limited effect of TP in explaining Hg bioaccumulation by high trophic level consumers in particular. On the contrary, our results suggest an important role of habitat and/or feeding zone, which strongly influence muscle Hg bioaccumulation. Deep-sea fish species effectively presented the highest Hg concentrations. Possible interactions between biological factors (e.g., age of deep-sea organisms) and bioavailability of the metal in the deep-sea environment are discussed to explain such enhanced bioaccumulation of Hg by deep-sea fauna in the Bay of Biscay. This study also highlights a potential risk for human health when deep-sea fish are consumed frequently.

  12. Demersal fish assemblages on seamounts and other rugged features in the northeastern Caribbean

    USGS Publications Warehouse

    Quattrini, Andrea M.; Demopoulos, Amanda W. J.; Singer, Randal; Roa-Varon, Adela; Chaytor, Jason D.

    2017-01-01

    Recent investigations of demersal fish communities in deep (>50 m) rugged habitats have considerably increased our knowledge of the factors that influence the assemblage structure of fishes across mesophotic to deep-sea depths. Although habitat types influence deepwater fish distribution, whether different rugged seafloor features provide functionally equivalent habitat for fishes is poorly understood. In the northeastern Caribbean, numerous rugged seafloor features (e.g., seamounts, banks, canyons) punctuate insular margins, and thus create a remarkable setting in which to examine demersal fish communities across various seafloor features. Also in this region, several water masses are vertically layered in the water column, creating strong stratification layers corresponding to specific abiotic conditions. In this study, we examined differences among fish assemblages across seafloor features (e.g., seamount, canyon, bank/ridge) and water masses at depths ranging from 98 to 4060 m in the northeastern Caribbean. We conducted 26 ROV dives across 18 sites, yielding 156 species; 42% of which had not been previously recorded from particular depths or localities in the region. While fewer species were observed at seamounts than at other habitats in the NE Caribbean, assemblage structure was similar among habitat features. Thus, similar to seamount studies in other regions, seamounts in the Anegada Passage do not harbor distinct communities from other rugged, topographic features. Species assemblages, however, differed among depths, with zonation generally corresponding to water mass boundaries in the region. High species turnover occurred at depths <1200 m, and is driven by changes in water mass characteristics including temperature (4.8-24.4 ºC) and dissolved oxygen (2.2-9.5 mg per l). Our study demonstrates the importance of water masses in shaping community structure of benthic fauna, while considerably adding to the knowledge of mesophotic and deep-sea fish

  13. Automated Video Quality Assessment for Deep-Sea Video

    NASA Astrophysics Data System (ADS)

    Pirenne, B.; Hoeberechts, M.; Kalmbach, A.; Sadhu, T.; Branzan Albu, A.; Glotin, H.; Jeffries, M. A.; Bui, A. O. V.

    2015-12-01

    Video provides a rich source of data for geophysical analysis, often supplying detailed information about the environment when other instruments may not. This is especially true of deep-sea environments, where direct visual observations cannot be made. As computer vision techniques improve and volumes of video data increase, automated video analysis is emerging as a practical alternative to labor-intensive manual analysis. Automated techniques can be much more sensitive to video quality than their manual counterparts, so performing quality assessment before doing full analysis is critical to producing valid results.Ocean Networks Canada (ONC), an initiative of the University of Victoria, operates cabled ocean observatories that supply continuous power and Internet connectivity to a broad suite of subsea instruments from the coast to the deep sea, including video and still cameras. This network of ocean observatories has produced almost 20,000 hours of video (about 38 hours are recorded each day) and an additional 8,000 hours of logs from remotely operated vehicle (ROV) dives. We begin by surveying some ways in which deep-sea video poses challenges for automated analysis, including: 1. Non-uniform lighting: Single, directional, light sources produce uneven luminance distributions and shadows; remotely operated lighting equipment are also susceptible to technical failures. 2. Particulate noise: Turbidity and marine snow are often present in underwater video; particles in the water column can have sharper focus and higher contrast than the objects of interest due to their proximity to the light source and can also influence the camera's autofocus and auto white-balance routines. 3. Color distortion (low contrast): The rate of absorption of light in water varies by wavelength, and is higher overall than in air, altering apparent colors and lowering the contrast of objects at a distance.We also describe measures under development at ONC for detecting and mitigating

  14. Observed deep energetic eddies by seamount wake.

    PubMed

    Chen, Gengxin; Wang, Dongxiao; Dong, Changming; Zu, Tingting; Xue, Huijie; Shu, Yeqiang; Chu, Xiaoqing; Qi, Yiquan; Chen, Hui

    2015-11-30

    Despite numerous surface eddies are observed in the ocean, deep eddies (a type of eddies which have no footprints at the sea surface) are much less reported in the literature due to the scarcity of their observation. In this letter, from recently collected current and temperature data by mooring arrays, a deep energetic and baroclinic eddy is detected in the northwestern South China Sea (SCS) with its intensity, size, polarity and structure being characterized. It remarkably deepens isotherm at deep layers by the amplitude of ~120 m and induces a maximal velocity amplitude about 0.18 m/s, which is far larger than the median velocity (0.02 m/s). The deep eddy is generated in a wake when a steering flow in the upper layer passes a seamount, induced by a surface cyclonic eddy. More observations suggest that the deep eddy should not be an episode in the area. Deep eddies significantly increase the velocity intensity and enhance the mixing in the deep ocean, also have potential implication for deep-sea sediments transport.

  15. Observed deep energetic eddies by seamount wake

    NASA Astrophysics Data System (ADS)

    Chen, Gengxin; Wang, Dongxiao; Dong, Changming; Zu, Tingting; Xue, Huijie; Shu, Yeqiang; Chu, Xiaoqing; Qi, Yiquan; Chen, Hui

    2015-11-01

    Despite numerous surface eddies are observed in the ocean, deep eddies (a type of eddies which have no footprints at the sea surface) are much less reported in the literature due to the scarcity of their observation. In this letter, from recently collected current and temperature data by mooring arrays, a deep energetic and baroclinic eddy is detected in the northwestern South China Sea (SCS) with its intensity, size, polarity and structure being characterized. It remarkably deepens isotherm at deep layers by the amplitude of ~120 m and induces a maximal velocity amplitude about 0.18 m/s, which is far larger than the median velocity (0.02 m/s). The deep eddy is generated in a wake when a steering flow in the upper layer passes a seamount, induced by a surface cyclonic eddy. More observations suggest that the deep eddy should not be an episode in the area. Deep eddies significantly increase the velocity intensity and enhance the mixing in the deep ocean, also have potential implication for deep-sea sediments transport.

  16. Observed deep energetic eddies by seamount wake

    PubMed Central

    Chen, Gengxin; Wang, Dongxiao; Dong, Changming; Zu, Tingting; Xue, Huijie; Shu, Yeqiang; Chu, Xiaoqing; Qi, Yiquan; Chen, Hui

    2015-01-01

    Despite numerous surface eddies are observed in the ocean, deep eddies (a type of eddies which have no footprints at the sea surface) are much less reported in the literature due to the scarcity of their observation. In this letter, from recently collected current and temperature data by mooring arrays, a deep energetic and baroclinic eddy is detected in the northwestern South China Sea (SCS) with its intensity, size, polarity and structure being characterized. It remarkably deepens isotherm at deep layers by the amplitude of ~120 m and induces a maximal velocity amplitude about 0.18 m/s, which is far larger than the median velocity (0.02 m/s). The deep eddy is generated in a wake when a steering flow in the upper layer passes a seamount, induced by a surface cyclonic eddy. More observations suggest that the deep eddy should not be an episode in the area. Deep eddies significantly increase the velocity intensity and enhance the mixing in the deep ocean, also have potential implication for deep-sea sediments transport. PMID:26617343

  17. Deep-sea foraging behavior: its bathymetric potential in the fossil record.

    PubMed

    Kitchell, J A; Kitchell, J F; Clark, D L; Dangeard, L

    1978-06-16

    Spiral and meander foraging traces in the deep sea are not distributed in proportion to assumed food availability. Data collected by means of deep-sea photography failed to reveal a bathymetric gradient in behavioral complexity or sensitivity. The foraging paradigm developed by numerous trace fossil studies does not adequately predict the modern environment.

  18. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 47 Telecommunication 2 2010-10-01 2010-10-01 false Submarine and deep sea cable expense. 32.6424 Section 32.6424 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) COMMON CARRIER SERVICES... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine...

  19. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 47 Telecommunication 2 2014-10-01 2014-10-01 false Submarine and deep sea cable expense. 32.6424 Section 32.6424 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) COMMON CARRIER SERVICES... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine...

  20. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 47 Telecommunication 2 2012-10-01 2012-10-01 false Submarine and deep sea cable expense. 32.6424 Section 32.6424 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) COMMON CARRIER SERVICES... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine...

  1. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 47 Telecommunication 2 2011-10-01 2011-10-01 false Submarine and deep sea cable expense. 32.6424 Section 32.6424 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) COMMON CARRIER SERVICES... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine...

  2. 47 CFR 32.6424 - Submarine and deep sea cable expense.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 47 Telecommunication 2 2013-10-01 2013-10-01 false Submarine and deep sea cable expense. 32.6424 Section 32.6424 Telecommunication FEDERAL COMMUNICATIONS COMMISSION (CONTINUED) COMMON CARRIER SERVICES... Submarine and deep sea cable expense. (a) This account shall include expenses associated with submarine...

  3. Potential Health Benefits of Deep Sea Water: A Review

    PubMed Central

    Jaafar, A. B.; Mahdzir, A.; Musa, M. N.

    2016-01-01

    Deep sea water (DSW) commonly refers to a body of seawater that is pumped up from a depth of over 200 m. It is usually associated with the following characteristics: low temperature, high purity, and being rich with nutrients, namely, beneficial elements, which include magnesium, calcium, potassium, chromium, selenium, zinc, and vanadium. Less photosynthesis of plant planktons, consumption of nutrients, and organic decomposition have caused lots of nutrients to remain there. Due to this, DSW has potential to become a good source for health. Research has proven that DSW can help overcome health problems especially related to lifestyle-associated diseases such as cardiovascular disease, diabetes, obesity, cancer, and skin problems. This paper reviews the potential health benefits of DSW by referring to the findings from previous researches. PMID:28105060

  4. Power, fresh water, and food from cold, deep sea water.

    PubMed

    Othmer, D F; Roels, O A

    1973-10-12

    Many times more solar heat energy accumulates in the vast volume of warm tropic seas than that produced by all of our power plants. The looming energy crisis causes a renewal of interest in utilizing this stored solar heat to give, in addition to electric power, vast quantities of fresh water. Warm surface water, when evaporated, generates steam, to power a turbine, then fresh water when the steam is condensed by the cold water. A great increase in revenues over that from power and fresh water is shown by a substantial mariculture pilot plant. Deep sea water contains large quantities of nutrients. These feed algae which feed shellfish, ultimately shrimps and lobsters, in shallow ponds. Wastes grow seaweed of value; and combined revenues from desalination, power generation, and mariculture will give substantial profit.

  5. Catalysis of carbon monoxide methanation by deep sea manganate minerals

    NASA Technical Reports Server (NTRS)

    Cabrera, A. L.; Maple, M. B.; Arrhenius, G.

    1990-01-01

    The catalytic activity of deep sea manganese nodule minerals for the methanation of carbon monoxide was measured with a microcatalytic technique between 200 and 460 degrees C. The manganate minerals were activated at 248 degrees C by immersion into a stream of hydrogen in which pulses of carbon monoxide were injected. Activation energies for the methanation reaction and hydrogen desorption from the manganate minerals were obtained and compared with those of pure nickel. Similar energy values indicate that the activity of the nodule materials for the reaction appears to be related to the amount of reducible transition metals present in the samples (ca. 11 wt.-%). Since the activity of the nodule minerals per gram is comparable to that of pure nickel, most of the transition metal ions located between manganese oxide layers appear to be exposed and available to catalyze the reaction.

  6. Alchemy or Science? Compromising Archaeology in the Deep Sea

    NASA Astrophysics Data System (ADS)

    Adams, Jonathan

    2007-06-01

    In the torrid debate between archaeology and treasure hunting, compromise is often suggested as the pragmatic solution, especially for archaeology carried out either in deep water or beyond the constraints that commonly regulate such activities in territorial seas. Both the wisdom and the need for such compromise have even been advocated by some archaeologists, particularly in forums such as the internet and conferences. This paper argues that such a compromise is impossible, not in order to fuel confrontation but simply because of the nature of any academic discipline. We can define what archaeology is in terms of its aims, theories, methods and ethics, so combining it with an activity founded on opposing principles must transform it into something else. The way forward for archaeology in the deep sea does not lie in a contradictory realignment of archaeology’s goals but in collaborative research designed to mesh with emerging national and regional research and management plans.

  7. Microbiology to 10,500 meters in the deep sea.

    PubMed

    Yayanos, A A

    1995-01-01

    Microorganisms in the deep sea live at high pressures, low and high temperatures, and in darkness. These parameters and their food supply govern their lives. The study of these creatures gives us an opportunity to see how life processes work at some of the highest temperatures and pressures of the biosphere. Cultured bacterial isolates can grow to over 100 MPa at 2 degrees C and to over 40 MPa at over 100 degrees C. These cultures comprise the foundation for the study of the molecular biology and biotechnology of these isolates. The PTk diagram shows how temperature and pressure affect the growth rate of a bacterium and helps in the search for relationships among bacteria from habitats differing in temperature and pressure.

  8. Potential Health Benefits of Deep Sea Water: A Review.

    PubMed

    Mohd Nani, Samihah Zura; Majid, F A A; Jaafar, A B; Mahdzir, A; Musa, M N

    2016-01-01

    Deep sea water (DSW) commonly refers to a body of seawater that is pumped up from a depth of over 200 m. It is usually associated with the following characteristics: low temperature, high purity, and being rich with nutrients, namely, beneficial elements, which include magnesium, calcium, potassium, chromium, selenium, zinc, and vanadium. Less photosynthesis of plant planktons, consumption of nutrients, and organic decomposition have caused lots of nutrients to remain there. Due to this, DSW has potential to become a good source for health. Research has proven that DSW can help overcome health problems especially related to lifestyle-associated diseases such as cardiovascular disease, diabetes, obesity, cancer, and skin problems. This paper reviews the potential health benefits of DSW by referring to the findings from previous researches.

  9. Deep-sea seabed habitats: Do they support distinct mega-epifaunal communities that have different vulnerabilities to anthropogenic disturbance?

    NASA Astrophysics Data System (ADS)

    Bowden, David A.; Rowden, Ashley A.; Leduc, Daniel; Beaumont, Jennifer; Clark, Malcolm R.

    2016-01-01

    Growing economic interest in seabed resources in the deep-sea highlights the need for information about the spatial distribution and vulnerability to disturbance of benthic habitats and fauna. Categorisation of seabed habitats for management is often based on topographic features such as canyons and seamounts that can be distinguished using regional bathymetry ('mega-habitats'). This is practical but because such habitats are contiguous with others, there is potential for overlap in the communities associated with them. Because concepts of habitat and community vulnerability are based on the traits of individual taxa, the nature and extent of differences between communities have implications for strategies to manage the environmental effects of resource use. Using towed video camera transects, we surveyed mega-epifaunal communities of three topographically-defined habitats (canyon, seamount or knoll, and continental slope) and two physico-chemically defined meso-scale habitats (cold seep and hydrothermal vent) in two regions off New Zealand to assess whether each supports a distinct type of community. Cold seep and hydrothermal vent communities were strongly distinct from those in other habitats. Across the other habitats, however, distinctions between communities were often weak and were not consistent between regions. Dissimilarities among communities across all habitats were stronger and the density of filter-feeding taxa was higher in the Bay of Plenty than on the Hikurangi Margin, whereas densities of predatory and scavenging taxa were higher on the Hikurangi Margin. Substratum diversity at small spatial scales (<1 km) and trawl history were significantly correlated with community composition in both regions. We conclude that, (1) a lack of consistent distinction between communities raises questions about the general utility of topographically-defined mega-habitats in environmental management, (2) fine-scale survey of individual features is necessary to

  10. Global diversity and biogeography of deep-sea pelagic prokaryotes.

    PubMed

    Salazar, Guillem; Cornejo-Castillo, Francisco M; Benítez-Barrios, Verónica; Fraile-Nuez, Eugenio; Álvarez-Salgado, X Antón; Duarte, Carlos M; Gasol, Josep M; Acinas, Silvia G

    2016-03-01

    The deep-sea is the largest biome of the biosphere, and contains more than half of the whole ocean's microbes. Uncovering their general patterns of diversity and community structure at a global scale remains a great challenge, as only fragmentary information of deep-sea microbial diversity exists based on regional-scale studies. Here we report the first globally comprehensive survey of the prokaryotic communities inhabiting the bathypelagic ocean using high-throughput sequencing of the 16S rRNA gene. This work identifies the dominant prokaryotes in the pelagic deep ocean and reveals that 50% of the operational taxonomic units (OTUs) belong to previously unknown prokaryotic taxa, most of which are rare and appear in just a few samples. We show that whereas the local richness of communities is comparable to that observed in previous regional studies, the global pool of prokaryotic taxa detected is modest (~3600 OTUs), as a high proportion of OTUs are shared among samples. The water masses appear to act as clear drivers of the geographical distribution of both particle-attached and free-living prokaryotes. In addition, we show that the deep-oceanic basins in which the bathypelagic realm is divided contain different particle-attached (but not free-living) microbial communities. The combination of the aging of the water masses and a lack of complete dispersal are identified as the main drivers for this biogeographical pattern. All together, we identify the potential of the deep ocean as a reservoir of still unknown biological diversity with a higher degree of spatial complexity than hitherto considered.

  11. Activity syndromes and metabolism in giant deep-sea isopods

    NASA Astrophysics Data System (ADS)

    Wilson, Alexander D. M.; Szekeres, Petra; Violich, Mackellar; Gutowsky, Lee F. G.; Eliason, Erika J.; Cooke, Steven J.

    2017-03-01

    Despite growing interest, the behavioural ecology of deep-sea organisms is largely unknown. Much of this scarcity in knowledge can be attributed to deepwater animals being secretive or comparatively 'rare', as well as technical difficulties associated with accessing such remote habitats. Here we tested whether two species of giant marine isopod (Bathynomus giganteus, Booralana tricarinata) captured from 653 to 875 m in the Caribbean Sea near Eleuthera, The Bahamas, exhibited an activity behavioural syndrome across two environmental contexts (presence/absence of food stimulus) and further whether this syndrome carried over consistently between sexes. We also measured routine metabolic rate and oxygen consumption in response to a food stimulus in B. giganteus to assess whether these variables are related to individual differences in personality. We found that both species show an activity syndrome across environmental contexts, but the underlying mechanistic basis of this syndrome, particularly in B. giganteus, is unclear. Contrary to our initial predictions, neither B. giganteus nor B. tricarinata showed any differences between mean expression of behavioural traits between sexes. Both sexes of B. tricarinata showed strong evidence of an activity syndrome underlying movement and foraging ecology, whereas only male B. giganteus showed evidence of an activity syndrome. Generally, individuals that were more active and bolder, in a standard open arena test were also more active when a food stimulus was present. Interestingly, individual differences in metabolism were not related to individual differences in behaviour based on present data. Our study provides the first measurements of behavioural syndromes and metabolism in giant deep-sea isopods.

  12. Global diversity and biogeography of deep-sea pelagic prokaryotes

    PubMed Central

    Salazar, Guillem; Cornejo-Castillo, Francisco M; Benítez-Barrios, Verónica; Fraile-Nuez, Eugenio; Álvarez-Salgado, X Antón; Duarte, Carlos M; Gasol, Josep M; Acinas, Silvia G

    2016-01-01

    The deep-sea is the largest biome of the biosphere, and contains more than half of the whole ocean's microbes. Uncovering their general patterns of diversity and community structure at a global scale remains a great challenge, as only fragmentary information of deep-sea microbial diversity exists based on regional-scale studies. Here we report the first globally comprehensive survey of the prokaryotic communities inhabiting the bathypelagic ocean using high-throughput sequencing of the 16S rRNA gene. This work identifies the dominant prokaryotes in the pelagic deep ocean and reveals that 50% of the operational taxonomic units (OTUs) belong to previously unknown prokaryotic taxa, most of which are rare and appear in just a few samples. We show that whereas the local richness of communities is comparable to that observed in previous regional studies, the global pool of prokaryotic taxa detected is modest (~3600 OTUs), as a high proportion of OTUs are shared among samples. The water masses appear to act as clear drivers of the geographical distribution of both particle-attached and free-living prokaryotes. In addition, we show that the deep-oceanic basins in which the bathypelagic realm is divided contain different particle-attached (but not free-living) microbial communities. The combination of the aging of the water masses and a lack of complete dispersal are identified as the main drivers for this biogeographical pattern. All together, we identify the potential of the deep ocean as a reservoir of still unknown biological diversity with a higher degree of spatial complexity than hitherto considered. PMID:26251871

  13. First biological measurements of deep-sea corals from the Red Sea.

    PubMed

    Roder, C; Berumen, M L; Bouwmeester, J; Papathanassiou, E; Al-Suwailem, A; Voolstra, C R

    2013-10-03

    It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with 'deep-sea' and 'cold-water' corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key adaptations to prevailing environmental conditions. We investigated four sites and encountered six species of which at least two appear to be undescribed. One species is previously reported from the Red Sea but occurs in deep cold waters outside the Red Sea raising interesting questions about presumed environmental constraints for other deep-sea corals. Our findings suggest that the present understanding of deep-sea coral persistence and resilience needs to be revisited.

  14. Beta-diversity on deep-sea wood falls reflects gradients in energy availability.

    PubMed

    McClain, Craig; Barry, James

    2014-01-01

    Wood falls on the deep-sea floor represent a significant source of energy into the food-limited deep sea. Unique communities of primarily wood- and sulfide-obligate species form on these wood falls. However, little is known regarding patterns and drivers of variation in the composition of wood fall communities through space and time, and thus, how wood falls contribute to deep-sea biodiversity. Eighteen Acacia logs varying in size were placed and retrieved after five years at a 3200 m site in the Pacific Ocean. We found that the taxonomic composition and structure of deep-sea wood fall communities varied considerably and equated with considerable differences in energy usage and availability. Our findings suggest that natural variability in wood falls may contribute significantly to deep-sea diversity.

  15. Temporal latitudinal-gradient dynamics and tropical instability of deep-sea species diversity

    USGS Publications Warehouse

    Yasuhara, Moriaki; Hunt, G.; Cronin, T. M.; Okahashi, H.

    2009-01-01

    A benthic microfaunal record from the equatorial Atlantic Ocean over the past four glacial-interglacial cycles was investigated to understand temporal dynamics of deep-sea latitudinal species diversity gradients (LSDGs). The results demonstrate unexpected instability and high amplitude fluctuations of species diversity in the tropical deep ocean that are correlated with orbital-scale oscillations in global climate: Species diversity is low during glacial and high during interglacial periods. This implies that climate severely influences deep-sea diversity, even at tropical latitudes, and that deep-sea LSDGs, while generally present for the last 36 million years, were weakened or absent during glacial periods. Temporally dynamic LSDGs and unstable tropical diversity require reconsideration of current ecological hypotheses about the generation and maintenance of biodiversity as they apply to the deep sea, and underscore the potential vulnerability and conservation importance of tropical deep-sea ecosystems.

  16. [Taxonomic composition and zoogeographical aspects of deep sea fishes (90-540m) from the Gulf of California, Mexico].

    PubMed

    López-Martínez, Juana; Acevedo-Cervantes, Alejandro; Herrera-Valdivia, Eloisa; Rodríguez-Romero, Jesús; Palacios-Salgado, Deivis S

    2012-03-01

    The Gulf of California has a high variety of ecosystems that allow different services and the fishery resources play a prominent role in its ecology, evolution and economics. Fish coastal species have been previously reported for most coastal areas, especially those species that are subject to fishing, however, little is known on the species from deep sea zones, due to sampling difficulties. We studied the deep sea fishes collected with trawl nets during three research surveys in the Gulf of California, Mexico in 2004-2005. We provide a systematic checklist and some notes on biogeographical aspects. For this, 74 fishing hauls were done, and a total of 9 898 fishes were captured, belonging to two classes, 15 orders, 35 families, 53 genera and 70 species. The best represented families in number of species were: Paralichthyidae (eight), Serranidae (six), and Scorpaenidae and Triglidae with five species each one. The typical families from deep waters were: Ophidiidae, Moridae, Lophiidae, Scorpaenidae, Triglidae, Paralichthydae, Pleuronectidae and Cynoglossidae. Size range varied from 13cm for the Splinose searobin (Bellator xenisma) to 234cm in the Pacific Cutlassfish (Trichiurus nitens). The biogeographical affinity showed that species with affinity to the East Tropical Pacific (ETP) dominated, followed by species from San Diego-Panamic, San Diego-Panamic-Peruvian-Chilean and Oregonian-Cortes provinces, respectively. A biogeographic overlap was found in the fauna, which reflects the Gulf of California's geographical position, with distribution limits of species from temperate, tropical and warm-temperature transition affinities, divisions that characterize the Gulf of California. Taxonomic status of fish with a focus on composition, location, characterization and zoogeography are fundamental to any subject of biodiversity and fisheries management actions.

  17. Molecular phylogenetic and chemical analyses of the microbial mats in deep-sea cold seep sediments at the northeastern Japan Sea.

    PubMed

    Arakawa, Shizuka; Sato, Takako; Sato, Rumi; Zhang, Jing; Gamo, Toshitaka; Tsunogai, Urumu; Hirota, Akinari; Yoshida, Yasuhiko; Usami, Ron; Inagaki, Fumio; Kato, Chiaki

    2006-08-01

    Microbial communities inhabiting deep-sea cold seep sediments at the northeastern Japan Sea were characterized by molecular phylogenetic and chemical analyses. White patchy microbial mats were observed along the fault offshore the Hokkaido Island and sediment samples were collected from two stations at the southern foot of the Shiribeshi seamount (M1 site at a depth of 2,961 m on the active fault) and off the Motta Cape site (M2 site at a depth of 3,064 m off the active fault). The phylogenetic and terminal-restriction fragment polymorphism analyses of PCR-amplified 16S rRNA genes revealed that microbial community structures were different between two sampling stations. The members of ANME-2 archaea and diverse bacterial components including sulfate reducers within Deltaproteobacteria were detected from M1 site, indicating the occurrence of biologically mediated anaerobic oxidation of methane, while microbial community at M2 site was predominantly composed of members of Marine Crenarchaeota group I, sulfate reducers of Deltaproteobacteria, and sulfur oxidizers of Epsilonproteobacteria. Chemical analyses of seawater above microbial mats suggested that concentrations of sulfate and methane at M1 site were largely decreased relative to those at M2 site and carbon isotopic composition of methane at M1 site shifted heavier ((13)C-enriched), the results of which are consistent with molecular analyses. These results suggest that the mat microbial communities in deep-sea cold seep sediments at the northeastern Japan Sea are significantly responsible for sulfur and carbon circulations and the geological activity associated with plate movements serves unique microbial habitats in deep-sea environments.

  18. Telopathes magna gen. nov., spec. nov. (Cnidaria: Anthozoa: Antipatharia: Schizopathidae) from deep waters off Atlantic Canada and the first molecular phylogeny of the deep-sea family Schizopathidae.

    PubMed

    Macisaac, K G; Best, M; Brugler, M R; Kenchington, E L R; Anstey, L J; Jordan, T

    2013-01-01

    A new genus and species of deep-sea antipatharian, Telopathes magna gen. nov., spec. nov., is described from the western North Atlantic off the coast of Canada. Five additional paratypes, consisting ofjuvenile to adult forms, are reported from the New England and Corner Rise Seamounts (NW Atlantic). Preliminary sequencing of a subsection of the nuclear ribosomal cistron confirmed the phylogenetic affinity of T. magna to the order Antipatharia, and in particular the family Schizopathidae. Subsequent sequencing of three mitochondrial DNA segments from nine of the 11 currently-recognized genera within the Schizopathidae revealed a well-supported phylogenetic relationship between T. magna and Stauropathes. This is the first study to use molecular techniques to elucidate the evolutionary relationships of the Schizopathidae, a family of black corals almost exclusively found in the deep sea (depths > 200 m). Telopathes is distinguished from other genera within the family Schizopathidae by its largely pinnulated stalk, sparse branching pattern to the second degree that is not restricted to a single plane, two anterolateral rows of long, simple primary pinnules, arranged alternately to sub-opposite, and colony with an adhesive base. This record of T. magna brings the total number of nominal species of Antipatharia reported to occur off eastern Canada to 12 and represents the third new genus added to the Schizopathidae since a critical review of the family by Dennis Opresko in 2002.

  19. Cloning and characterization of a new cold-active lipase from a deep-sea sediment metagenome.

    PubMed

    Jeon, Jeong Ho; Kim, Jun-Tae; Kim, Yun Jae; Kim, Hyung-Kwoun; Lee, Hyun Sook; Kang, Sung Gyun; Kim, Sang-Jin; Lee, Jung-Hyun

    2009-01-01

    To search for new cold-active lipases, a metagenomic library was constructed using cold-sea sediment samples at Edison Seamount and was screened for lipolytic activities by plating on a tricaprylin medium. Subsequently, a fosmid clone was selected, and the whole sequence of 36 kb insert of the fosmid clone was determined by shotgun sequencing. The sequence analysis revealed the presence of 25 open reading frames (ORF), and ORF20 (EML1) showed similarities to lipases. Phylogenetic analysis of EML1 suggested that the protein belonged to a new family of esterase/lipase together with LipG. The EML1 gene was expressed in Escherichia coli, and purified by metal-chelating chromatography. The optimum activity of the purified EML1 (rEML1) occurred at pH 8.0 and 25 degrees C, respectively, and rEML1 displayed more than 50% activity at 5 degrees C. The activation energy for the hydrolysis of olive oil was determined to be 3.28 kcal/mol, indicating that EML1 is a cold-active lipase. rEML1 preferentially hydrolyzed triacylglycerols acyl-group chains with long chain lengths of > or = 8 carbon atoms and displayed hydrolyzing activities toward various natural oil substrates. rEML1 was resistant to various detergents such as Triton X-100 and Tween 80. This study represents an example which developed a new cold-active lipase from a deep-sea sediment metagenome.

  20. Coupled RNA-SIP and metatranscriptomics of active chemolithoautotrophic communities at a deep-sea hydrothermal vent

    PubMed Central

    Fortunato, Caroline S; Huber, Julie A

    2016-01-01

    The chemolithoautotrophic microbial community of the rocky subseafloor potentially provides a large amount of organic carbon to the deep ocean, yet our understanding of the activity and metabolic complexity of subseafloor organisms remains poorly described. A combination of metagenomic, metatranscriptomic, and RNA stable isotope probing (RNA-SIP) analyses were used to identify the metabolic potential, expression patterns, and active autotrophic bacteria and archaea and their pathways present in low-temperature hydrothermal fluids from Axial Seamount, an active submarine volcano. Metagenomic and metatranscriptomic results showed the presence of genes and transcripts for sulfur, hydrogen, and ammonium oxidation, oxygen respiration, denitrification, and methanogenesis, as well as multiple carbon fixation pathways. In RNA-SIP experiments across a range of temperatures under reducing conditions, the enriched 13C fractions showed differences in taxonomic and functional diversity. At 30 °C and 55 °C, Epsilonproteobacteria were dominant, oxidizing hydrogen and primarily reducing nitrate. Methanogenic archaea were also present at 55 °C, and were the only autotrophs present at 80 °C. Correspondingly, the predominant CO2 fixation pathways changed from the reductive tricarboxylic acid (rTCA) cycle to the reductive acetyl-CoA pathway with increasing temperature. By coupling RNA-SIP with meta-omics, this study demonstrates the presence and activity of distinct chemolithoautotrophic communities across a thermal gradient of a deep-sea hydrothermal vent. PMID:26872039

  1. Coupled RNA-SIP and metatranscriptomics of active chemolithoautotrophic communities at a deep-sea hydrothermal vent.

    PubMed

    Fortunato, Caroline S; Huber, Julie A

    2016-08-01

    The chemolithoautotrophic microbial community of the rocky subseafloor potentially provides a large amount of organic carbon to the deep ocean, yet our understanding of the activity and metabolic complexity of subseafloor organisms remains poorly described. A combination of metagenomic, metatranscriptomic, and RNA stable isotope probing (RNA-SIP) analyses were used to identify the metabolic potential, expression patterns, and active autotrophic bacteria and archaea and their pathways present in low-temperature hydrothermal fluids from Axial Seamount, an active submarine volcano. Metagenomic and metatranscriptomic results showed the presence of genes and transcripts for sulfur, hydrogen, and ammonium oxidation, oxygen respiration, denitrification, and methanogenesis, as well as multiple carbon fixation pathways. In RNA-SIP experiments across a range of temperatures under reducing conditions, the enriched (13)C fractions showed differences in taxonomic and functional diversity. At 30 °C and 55 °C, Epsilonproteobacteria were dominant, oxidizing hydrogen and primarily reducing nitrate. Methanogenic archaea were also present at 55 °C, and were the only autotrophs present at 80 °C. Correspondingly, the predominant CO2 fixation pathways changed from the reductive tricarboxylic acid (rTCA) cycle to the reductive acetyl-CoA pathway with increasing temperature. By coupling RNA-SIP with meta-omics, this study demonstrates the presence and activity of distinct chemolithoautotrophic communities across a thermal gradient of a deep-sea hydrothermal vent.

  2. Linking microbial ultrastructure and physiology to iron depositional processes in deep sea hydrothermal environments

    NASA Astrophysics Data System (ADS)

    Chan, C. S.; Fleming, E. J.; Emerson, D.; Edwards, K. J.

    2008-12-01

    Clara S. Chan, Emily Fleming, David Emerson, Katrina J. Edwards Iron microbial mats have been discovered in a variety of deep-sea hydrothermal environments and are increasingly being recognized as more seafloor is explored. The predominant structures found in many of these mats are iron oxyhydroxide-rich filaments. One of the most common structures is a helical stalk bearing a resemblance to the twisted stalk of the terrestrial iron-oxidizing microbe, Gallionella ferruginea. While Gallionella has not been detected in, or isolated from, these mats microaerophilic iron-oxidizing, a stalk- forming bacterium, Mariprofundus ferrooxydans (PV-1 and related strains) has been isolated from mats at the Loihi seamount in Hawaii (Emerson et al. 2007, PLoS One 2(8): e667). Fossilized aggregates of iron filaments have been observed in the rock record (e.g. Little et al. 2004, Geomicrobiol. J. 21:415), and may represent ancient versions of these microbial mats. If this is shown to be true, such filaments would represent one of the few microfossil morphologies that can be linked to a specific microbial metabolism. We have used a combination of test tube culturing, microslide culturing, time lapse microscopy, and electron microscopy to study Mariprofundus stalk morphology and genesis and link these details to physiological responses to environmental chemistry. The goals include determining specific attributes of stalk morphology that can be used to determine the biogenicity of putative iron microfossils, and interpret the conditions of the depositional environment. Light microscopic observation of microslide cultures over the course of several days allowed for determination of bacterial response to developing oxygen and Fe(II) gradients. Once gradients have been established, given an abundant supply of oxygen, cells congregate in a band perpendicular to the gradient and stalks are formed, growing in the direction of increasing oxygen (and decreasing Fe) concentration. This

  3. Microbial Evolution at High Pressure: Deep Sea and Laboratory Studies

    NASA Astrophysics Data System (ADS)

    Bartlett, D. H.

    2011-12-01

    Elevated hydrostatic pressures are present in deep-sea and deep-Earth environments where this physical parameter has influenced the evolution and characteristics of life. Piezophilic (high-pressure-adapted) microbes have been isolated from diverse deep-sea settings, and would appear likely to occur in deep-subsurface habitats as well. In order to discern the factors enabling life at high pressure my research group has explored these adaptations at various levels, most recently including molecular analyses of deep-sea trench communities, and through the selective evolution of the model microbe Escherichia coli in the laboratory to progressively higher pressures. Much of the field work has focused on the microbes present in the deeper portions of the Puerto Rico Trench (PRT)and in the Peru-Chile Trench (PCT), from 6-8.5 km below the sea surface (~60-85 megapascals pressure). Culture-independent phylogenetic data on the Bacteria and Archaea present on particles or free-living, along with data on the microeukarya present was complemented with genomic analyses and the isolation and characterization of microbes in culture. Metagenomic analyses of the PRT revealed increased genome sizes and an overrepresentation at depth of sulfatases for the breakdown of sulfated polysaccharides and specific categories of transporters, including those associated with the transport of diverse cations or carboxylate ions, or associated with heavy metal resistance. Single-cell genomic studies revealed several linneages which recruited to the PRT metagenome far better than existing marine microbial genome sequences. analyses. Novel high pressure culture approaches have yielded new piezophiles including species preferring very low nutrient levels, those living off of hydrocarbons, and those adapted to various electron donor/electron acceptor combinations. In order to more specifically focus on functions enabling life at increased pressure selective evolution experiments were performed with

  4. Quantifying the direct use value of Condor seamount

    NASA Astrophysics Data System (ADS)

    Ressurreição, Adriana; Giacomello, Eva

    2013-12-01

    Seamounts often satisfy numerous uses and interests. Multiple uses can generate multiple benefits but also conflicts and impacts, calling, therefore, for integrated and sustainable management. To assist in developing comprehensive management strategies, policymakers recognise the need to include measures of socioeconomic analysis alongside ecological data so that practical compromises can be made. This study assessed the direct output impact (DOI) of the relevant marine activities operating at Condor seamount (Azores, central northeast Atlantic) as proxies of the direct use values provided by the resource system. Results demonstrated that Condor seamount supported a wide range of uses yielding distinct economic outputs. Demersal fisheries, scientific research and shark diving were the top-three activities generating the highest revenues, while tuna fisheries, whale watching and scuba-diving had marginal economic significance. Results also indicated that the economic importance of non-extractive uses of Condor is considerable, highlighting the importance of these uses as alternative income-generating opportunities for local communities. It is hoped that quantifying the direct use values provided by Condor seamount will contribute to the decision making process towards its long-term conservation and sustainable use.

  5. Mechanism of Deep-Sea Fish α-Actin Pressure Tolerance Investigated by Molecular Dynamics Simulations

    PubMed Central

    Wakai, Nobuhiko; Takemura, Kazuhiro; Morita, Takami; Kitao, Akio

    2014-01-01

    The pressure tolerance of monomeric α-actin proteins from the deep-sea fish Coryphaenoides armatus and C. yaquinae was compared to that of non-deep-sea fish C. acrolepis, carp, and rabbit/human/chicken actins using molecular dynamics simulations at 0.1 and 60 MPa. The amino acid sequences of actins are highly conserved across a variety of species. The actins from C. armatus and C. yaquinae have the specific substitutions Q137K/V54A and Q137K/L67P, respectively, relative to C. acrolepis, and are pressure tolerant to depths of at least 6000 m. At high pressure, we observed significant changes in the salt bridge patterns in deep-sea fish actins, and these changes are expected to stabilize ATP binding and subdomain arrangement. Salt bridges between ATP and K137, formed in deep-sea fish actins, are expected to stabilize ATP binding even at high pressure. At high pressure, deep-sea fish actins also formed a greater total number of salt bridges than non-deep-sea fish actins owing to the formation of inter-helix/strand and inter-subdomain salt bridges. Free energy analysis suggests that deep-sea fish actins are stabilized to a greater degree by the conformational energy decrease associated with pressure effect. PMID:24465747

  6. Mechanism of deep-sea fish α-actin pressure tolerance investigated by molecular dynamics simulations.

    PubMed

    Wakai, Nobuhiko; Takemura, Kazuhiro; Morita, Takami; Kitao, Akio

    2014-01-01

    The pressure tolerance of monomeric α-actin proteins from the deep-sea fish Coryphaenoides armatus and C. yaquinae was compared to that of non-deep-sea fish C. acrolepis, carp, and rabbit/human/chicken actins using molecular dynamics simulations at 0.1 and 60 MPa. The amino acid sequences of actins are highly conserved across a variety of species. The actins from C. armatus and C. yaquinae have the specific substitutions Q137K/V54A and Q137K/L67P, respectively, relative to C. acrolepis, and are pressure tolerant to depths of at least 6000 m. At high pressure, we observed significant changes in the salt bridge patterns in deep-sea fish actins, and these changes are expected to stabilize ATP binding and subdomain arrangement. Salt bridges between ATP and K137, formed in deep-sea fish actins, are expected to stabilize ATP binding even at high pressure. At high pressure, deep-sea fish actins also formed a greater total number of salt bridges than non-deep-sea fish actins owing to the formation of inter-helix/strand and inter-subdomain salt bridges. Free energy analysis suggests that deep-sea fish actins are stabilized to a greater degree by the conformational energy decrease associated with pressure effect.

  7. Adaptation to deep-sea methane seeps from Cretaceous shallow-water black shale environments?

    NASA Astrophysics Data System (ADS)

    Kiel, Steffen; Wiese, Frank; Titus, Alan

    2013-04-01

    Sulfide-enriched environments in shallow water were considered as sites where animals acquire pre-adaptations enabling them to colonize deep-sea hydrothermal vents and seeps or where they survived extinction events in their deep-sea habitats. Here we present upper Cenomanian (early Late Cretaceous) shallow-water seep communities from the Tropic Shale in the Western Interior Seaway, USA, that lived during a time of extremely warm deep-water temperatures, which supposedly facilitates adaptations to the deep sea, and time-equivalent with a period of widespread oceanic and photic zone anoxia (OAE 2) that supposedly extinguished deep-water vent and seep faunas. Contrary to the expectation, the taxa inhabiting the Tropic Shale seeps were not found at any coeval or younger deep-water seep or vent deposit. This suggests that (i) pre-adaptations for living at deep-sea vents and seeps do not evolve at shallow-water methane seeps, and probably also not in sulfide-rich shallow-water environments in general; (ii) a low temperature gradient from shallow to deep water does not facilitate onshore-offshore adaptations to deep-sea vents and seeps; and (iii) shallow-water seeps did not act as refuges for deep-sea vent and seep animals. We hypothesize that the vast majority of adaptations to successfully colonize deep-sea vents and seeps are acquired below the photic zone.

  8. Deep-sea water improves cardiovascular hemodynamics in Kurosawa and Kusanagi-Hypercholesterolemic (KHC) rabbits.

    PubMed

    Katsuda, Shin-Ichiro; Yasukawa, Takeshi; Nakagawa, Koji; Miyake, Masao; Yamasaki, Masao; Katahira, Kiyoaki; Mohri, Motohiko; Shimizu, Tsuyoshi; Hazama, Akihiro

    2008-01-01

    Deep-sea water is rich in minerals, e.g., Mg, Ca, and K which have been considered to be associated with prevention of cardiovascular disease. We investigated the effect of deep-sea water on cardiovascular hemodynamics in Kurosawa and Kusanagi-Hypercholesterolemic (KHC) rabbits. Deep-sea water was pumped in the offing of Cape Muroto in Japan and the mineral constituents were refined to a degree of hardness of 1,000. Twenty four 4-month-old KHC rabbits were given refined deep-sea water (n=12) and tap water (n=12) for 6 months. Pressure and flow waves at the ascending aorta were recorded under pentobarbital anesthesia. Systolic, diastolic, pulse and mean arterial pressures and total peripheral resistance were significantly lower in the deep-sea water group than in the control group. There were no significant differences in changes in serum lipid levels, plasma renin and angiotensin converting enzyme activities and electrolyte levels except for Mg(2+) after the feeding of the water between the two groups. A slight increase in serum Mg(2+) level in the deep-sea water group may not account for the inhibition of mild hypertension. From our results, we conclude that deep-sea water could improve cardiovascular hemodynamics, even though the factors which affect the blood pressure are still unknown.

  9. Marine culturable yeasts in deep-sea hydrothermal vents: species richness and association with fauna.

    PubMed

    Burgaud, Gaëtan; Arzur, Danielle; Durand, Lucile; Cambon-Bonavita, Marie-Anne; Barbier, Georges

    2010-07-01

    Investigations of the diversity of culturable yeasts at deep-sea hydrothermal sites have suggested possible interactions with endemic fauna. Samples were collected during various oceanographic cruises at the Mid-Atlantic Ridge, South Pacific Basins and East Pacific Rise. Cultures of 32 isolates, mostly associated with animals, were collected. Phylogenetic analyses of 26S rRNA gene sequences revealed that the yeasts belonged to Ascomycota and Basidiomycota phyla, with the identification of several genera: Rhodotorula, Rhodosporidium, Candida, Debaryomyces and Cryptococcus. Those genera are usually isolated from deep-sea environments. To our knowledge, this is the first report of yeasts associated with deep-sea hydrothermal animals.

  10. An abyssal mobilome: viruses, plasmids and vesicles from deep-sea hydrothermal vents.

    PubMed

    Lossouarn, Julien; Dupont, Samuel; Gorlas, Aurore; Mercier, Coraline; Bienvenu, Nadege; Marguet, Evelyne; Forterre, Patrick; Geslin, Claire

    2015-12-01

    Mobile genetic elements (MGEs) such as viruses, plasmids, vesicles, gene transfer agents (GTAs), transposons and transpovirions, which collectively represent the mobilome, interact with cellular organisms from all three domains of life, including those thriving in the most extreme environments. While efforts have been made to better understand deep-sea vent microbial ecology, our knowledge of the mobilome associated with prokaryotes inhabiting deep-sea hydrothermal vents remains limited. Here we focus on the abyssal mobilome by reviewing accumulating data on viruses, plasmids and vesicles associated with thermophilic and hyperthermophilic Bacteria and Archaea present in deep-sea hydrothermal vents.

  11. Fluidal deep-sea volcanic ash as an indicator of explosive volcanism (Invited)

    NASA Astrophysics Data System (ADS)

    Clague, D. A.; Portner, R. A.; Paduan, J. B.; Dreyer, B. M.

    2013-12-01

    Fluidal glassy lava fragments are now known to be abundant at sites of submarine eruptions including the mid-ocean ridge system, near-ridge seamount chains, mid-plate volcanoes and the submarine rifts of ocean islands, deep-sea (4200m) alkalic lava fields, back-arc spreading centers, and arc volcanoes. Fluidal fragments at these diverse settings have compositions including basanite, tholeiite, boninite, andesite, dacite, and rhyolite. Fragments include straight, bent, curved, and coiled Pele's hair; flat, curved, twisted, folded, bent, or keeled ribbons; and flat, curved, or intensely folded limu o Pele. Most of these morphologies attach to blocky glass fragments. The fluidal fragments from different settings and depths are strikingly similar in morphology with variable vesicularity and particle thickness. They have been sampled flat and steep, rocky to sediment-covered substrates. Two different mechanisms are proposed to explain their origin: magmatic-volatile fragmentation during eruption and sea floor lava-water interactions. Volatiles in the melts and ambient water are present in all submarine volcanic settings, making it difficult to separate their role in forming the fragments. Submarine bubble-burst (strombolian) activity has been observed in situ at an active vent at -1200m on West Mata Volcano. However, lava-water interaction at elevated pressure has not been observed to make such fluidal fragments except in laboratory simulations. Lava-water interaction models suggest that pore water in sediment trapped beneath advancing lava flows migrates into the overlying flow where it expands to steam, and the expanding steam bubble escapes explosively through the flow top to form the fluidal fragments. This is different from the hollow (water-filled) pillars that form in inflating flows as trapped water escapes. Pillars grow upwards at contacts between flow lobes, thus the water exiting through pillars never enters (or exits) the molten lava flow interior. Another

  12. Carbon dioxide sequestration in deep-sea basalt.

    PubMed

    Goldberg, David S; Takahashi, Taro; Slagle, Angela L

    2008-07-22

    Developing a method for secure sequestration of anthropogenic carbon dioxide in geological formations is one of our most pressing global scientific problems. Injection into deep-sea basalt formations provides unique and significant advantages over other potential geological storage options, including (i) vast reservoir capacities sufficient to accommodate centuries-long U.S. production of fossil fuel CO2 at locations within pipeline distances to populated areas and CO2 sources along the U.S. west coast; (ii) sufficiently closed water-rock circulation pathways for the chemical reaction of CO2 with basalt to produce stable and nontoxic (Ca(2+), Mg(2+), Fe(2+))CO(3) infilling minerals, and (iii) significant risk reduction for post-injection leakage by geological, gravitational, and hydrate-trapping mechanisms. CO2 sequestration in established sediment-covered basalt aquifers on the Juan de Fuca plate offer promising locations to securely accommodate more than a century of future U.S. emissions, warranting energized scientific research, technological assessment, and economic evaluation to establish a viable pilot injection program in the future.

  13. Pressure response in deep-sea piezophilic bacteria.

    PubMed

    Kato, C; Qureshi, M H

    1999-08-01

    Several piezophilic bacteria have been isolated from deep-sea environments under high hydrostatic pressure. Taxonomic studies of the isolates showed that the piezophilic bacteria are not widely distributed in terms of taxonomic positions, and all were assigned to particular branches of the Proteobacteria gamma-subgroup. A pressure-regulated operon from piezophilic bacteria of the genus Shewanella, S. benthica and S. violacea, was cloned and sequenced, and downstream of this operon another pressure regulated operon, cydD-C, was found. The cydD gene was found to be essential for the bacterial growth under high-pressure conditions, and the product of this gene was found to play a role in their respiratory system. Results obtained later indicated that the respiratory system in piezophilic bacteria may be important for survival in a high-pressure environment, and more studies focusing on other components of the respiratory chain have been conducted. These studies suggested that piezophilic bacteria are capable of changing their respiratory system in response to pressure conditions, and a proposed respiratory chain model has been suggested in this regard.

  14. Deep sea hydrothermal plumes and their interaction with oscillatory flows

    NASA Astrophysics Data System (ADS)

    Xu, Guangyu; di Iorio, Daniela

    2012-09-01

    The acoustic scintillation method is applied to the investigation and monitoring of a vigorous hydrothermal plume from Dante within the Main Endeavour vent field (MEF) in the Endeavour Ridge segment. A 40 day time series of the plume's vertical velocity and temperature fluctuations provides a unique opportunity to study deep sea plume dynamics in a tidally varying horizontal cross flow. An integral plume model that takes into account ambient stratification and horizontal cross flows is established from the conservation equations of mass, momentum and density deficit. Using a linear additive entrainment velocity in the model (E = αUm + βU⊥) that is a function of both the plume relative axial velocity (Um) and the relative ambient flow perpendicular to the plume (U⊥) gives consistent results to the experimental data, suggesting entrainment coefficients α = 0.1 and β = 0.6. Also from the integral model, the plume height in a horizontal cross flow (Ua) is shown to scale as 1.8B1/3Ua-1/3N-2/3 for 0.01 ≤ Ua ≤ 0.1 m/s where B is the initial buoyancy transport and N is the ambient stratification, both of which are assumed constant.

  15. Cellulomonas marina sp. nov., isolated from deep-sea water.

    PubMed

    Zhang, Limin; Xi, Lijun; Qiu, Danheng; Song, Lei; Dai, Xin; Ruan, Jisheng; Huang, Ying

    2013-08-01

    A bacterial strain FXJ8.089(T) was isolated from deep-sea water collected from the southwest Indian Ocean (49° 39' E 37° 47' S) at a depth of 2800 m, and its taxonomic position was investigated by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain FXJ8.089(T) belonged to the genus Cellulomonas and had the highest similarities with Cellulomonas oligotrophica (96.9 %) and Cellulomonas aerilata (96.6 %). It contained MK-9(H4) as the predominant menaquinone. The polar lipids were diphosphatidylglycerol and phosphatidylinositol mannosides. The cell-wall peptidoglycan type was A4β with an interpeptide bridge L-Orn-D-Glu. The cell-wall sugars were glucose, mannose and ribose. The DNA G+C content was 70.3 mol%. The strain also showed a number of physiological and biochemical characteristics that were distinct from the closely related species. Based on phenotypic and genotypic data, strain FXJ8.089(T) (= CGMCC 4.6945(T) = DSM 24960(T)) represents a novel species of the genus Cellulomonas, for which the name Cellulomonas marina sp. nov. is proposed.

  16. Factors controlling ebro deep-sea fan growth, Mediterranean Sea

    SciTech Connect

    Nelson, C.H.; Maldonado, A.; Alonso, B.; Palanques, A.; Ryan, W.B.F.; Kastens, K.; O'Connel, S.

    1985-01-01

    Tectonic, sediment-source and sea-level factors control depositional patterns of the Ebro deep-sea fan system. In unstable, steep continental slope terrain, mass movement of material results in wide gullied canyons and formation of non-channelized debris aprons. These fan channels develop low sinuosity and generally traverse the continental rise without feeding into depositional lobes because of steep gradients (1:50 to 1:100) and sediment draining into the subsiding Valencia Valley graben. An abundance of sediment input points from mass failure and many river-fed canyons contributes to a depositional pattern of side-by-side debris aprons and separate channel-levee complexes. When a large sediment supply feeds a channel for a relatively long period 1) fan valley sinuosity increases: 2) channel walls are modified through undercutting, slumping, and crevasse splays: 3) channel bifurcation occurs: 4) incipient depositional lobe formation begins. Lowering of sea levels in Late Pleistocene time permitted the access of coarse river sediment to slope valleys and promoted deposition of numerous turbidites and active growth of the fan. During the Holocene, when sea levels have been high, a regime of hemipelagic sedimentation, mass movement, and debris apron sedimentation has dominated.

  17. Dining in the Deep: The Feeding Ecology of Deep-Sea Fishes.

    PubMed

    Drazen, Jeffrey C; Sutton, Tracey T

    2017-01-03

    Deep-sea fishes inhabit ∼75% of the biosphere and are a critical part of deep-sea food webs. Diet analysis and more recent trophic biomarker approaches, such as stable isotopes and fatty-acid profiles, have enabled the description of feeding guilds and an increased recognition of the vertical connectivity in food webs in a whole-water-column sense, including benthic-pelagic coupling. Ecosystem modeling requires data on feeding rates; the available estimates indicate that deep-sea fishes have lower per-individual feeding rates than coastal and epipelagic fishes, but the overall predation impact may be high. A limited number of studies have measured the vertical flux of carbon by mesopelagic fishes, which appears to be substantial. Anthropogenic activities are altering deep-sea ecosystems and their services, which are mediated by trophic interactions. We also summarize outstanding data gaps.

  18. Dining in the Deep: The Feeding Ecology of Deep-Sea Fishes

    NASA Astrophysics Data System (ADS)

    Drazen, Jeffrey C.; Sutton, Tracey T.

    2017-01-01

    Deep-sea fishes inhabit ˜75% of the biosphere and are a critical part of deep-sea food webs. Diet analysis and more recent trophic biomarker approaches, such as stable isotopes and fatty-acid profiles, have enabled the description of feeding guilds and an increased recognition of the vertical connectivity in food webs in a whole-water-column sense, including benthic-pelagic coupling. Ecosystem modeling requires data on feeding rates; the available estimates indicate that deep-sea fishes have lower per-individual feeding rates than coastal and epipelagic fishes, but the overall predation impact may be high. A limited number of studies have measured the vertical flux of carbon by mesopelagic fishes, which appears to be substantial. Anthropogenic activities are altering deep-sea ecosystems and their services, which are mediated by trophic interactions. We also summarize outstanding data gaps.

  19. A Brief Review of Bioactive Metabolites Derived from Deep-Sea Fungi

    PubMed Central

    Wang, Yan-Ting; Xue, Ya-Rong; Liu, Chang-Hong

    2015-01-01

    Deep-sea fungi, the fungi that inhabit the sea and the sediment at depths of over 1000 m below the surface, have become an important source of industrial, agricultural, and nutraceutical compounds based on their diversities in both structure and function. Since the first study of deep-sea fungi in the Atlantic Ocean at a depth of 4450 m was conducted approximately 50 years ago, hundreds of isolates of deep-sea fungi have been reported based on culture-dependent methods. To date more than 180 bioactive secondary metabolites derived from deep-sea fungi have been documented in the literature. These include compounds with anticancer, antimicrobial, antifungal, antiprotozoal, and antiviral activities. In this review, we summarize the structures and bioactivities of these metabolites to provide help for novel drug development. PMID:26213949

  20. A Brief Review of Bioactive Metabolites Derived from Deep-Sea Fungi.

    PubMed

    Wang, Yan-Ting; Xue, Ya-Rong; Liu, Chang-Hong

    2015-07-23

    Deep-sea fungi, the fungi that inhabit the sea and the sediment at depths of over 1000 m below the surface, have become an important source of industrial, agricultural, and nutraceutical compounds based on their diversities in both structure and function. Since the first study of deep-sea fungi in the Atlantic Ocean at a depth of 4450 m was conducted approximately 50 years ago, hundreds of isolates of deep-sea fungi have been reported based on culture-dependent methods. To date more than 180 bioactive secondary metabolites derived from deep-sea fungi have been documented in the literature. These include compounds with anticancer, antimicrobial, antifungal, antiprotozoal, and antiviral activities. In this review, we summarize the structures and bioactivities of these metabolites to provide help for novel drug development.

  1. Natural Products from Deep-Sea-Derived Fungi ̶ a New Source of Novel Bioactive Compounds?

    PubMed

    Daletos, Georgios; Ebrahim, Weaam; Ancheeva, Elena; El-Neketi, Mona; Proksch, Peter

    2017-03-14

    Over the last two decades, deep-sea-derived fungi are considered to be a new source of pharmacologically active secondary metabolites for drug discovery mainly based on the underlying assumption that the uniqueness of the deep sea will give rise to equally unprecedented natural products. Indeed, up to now over 200 new metabolites have been identified from deep-sea fungi, which is in support of the statement made above. This review will summarize the new and/or bioactive compounds reported from deep-sea-derived fungi in the last six years (2010 - present) and will critically evaluate whether the data published so far really support the notion that these fungi are a promising source of new bioactive chemical entities.

  2. Biosurfactant-producing yeast isolated from Calyptogena soyoae (deep-sea cold-seep clam) in the deep sea.

    PubMed

    Konishi, Masaaki; Fukuoka, Tokuma; Nagahama, Takahiko; Morita, Tomotake; Imura, Tomohiro; Kitamoto, Dai; Hatada, Yuji

    2010-08-01

    We describe a detailed structure determination of biosurfactant produced by Pseudozyma hubeiensis SY62, which was newly isolated from Calyptogena soyoae (deep-sea cold-seep clam, Shirouri-gai) at 1156 m in Sagami bay. P. hubeiensis SY62 was taxonomically slightly different from the P. hubeiensis type strain, which produces biosurfactants. Glycolipid production by the strain was also slightly different from those of previously reported strains. BS productivity was estimated to be around 30 g/l from the weight of the crude extract. At least five different spots of glycolipid biosurfactants (BSs) were detected by TLC. Results of nuclear magnetic resonance spectroscopies indicated the major product, namely MEL-C (4-O-[4'-O-acetyl-2',3'-di-O-alka(e)noil-beta-d-mannopyranosyl]-d-erythritol), as a promising BS. By further structural determination, the major fatty acids of MEL-C were estimated to be saturated C(6), C(10), and C(12) acids, which were shorter than those of previously reported MEL-C. Furthermore, (1)H-NMR spectra implied the presence of C(2) acids as acyl groups. According to surface tension determination, the novel MEL-C showed larger critical micelle concentration (1.1x10(-5) M) than conventional MEL-C which bound C(10) and C(12) acids (9.1x10(-6) M). From these results, shorter fatty acids would confer hydrophilicity onto the novel MEL-C.

  3. Enhanced seamount location database for the western and central Pacific Ocean: Screening and cross-checking of 20 existing datasets

    NASA Astrophysics Data System (ADS)

    Allain, Valérie; Kerandel, Julie-Anne; Andréfouët, Serge; Magron, Franck; Clark, Malcolm; Kirby, David S.; Muller-Karger, Frank E.

    2008-08-01

    Seamounts are habitats of considerable interest in terms of conservation and biodiversity, and in terms of fisheries for bentho-pelagic and pelagic species. Twenty previously compiled datasets including seamount/underwater feature lists, bathymetric maps and emerged feature maps from different sources (ship-derived and satellite altimetry-derived) at different spatial scales (from individual cruise to worldwide satellite data) were gathered in order to compile an enhanced list of underwater features for parts of the western and central Pacific Ocean (WCPO). The KL04 dataset [Kitchingman, A., and Lai, S., 2004. Inferences on potential seamount locations from mid-resolution bathymetric data. Fisheries Centre Research Reports 12 (5), 7-12], listing seamount positions and depths as calculated from satellite altimetry-derived bathymetry, provided the baseline data for this study as it covered the entire region of interest and included summit depth information. All KL04 potential seamounts were cross-checked with other datasets to remove any atolls and islands that had been incorrectly classified as seamounts, to add seamounts undetected by KL04, to update the overall database (geolocation, depth, elevation, and name) and to compile a 12-class typology of the different types of underwater features. Of the 4626 potential seamounts identified in KL04, 719 were multiple identifications of the same large underwater features and 373 (10%) were actually emerged banks, atolls and islands, leaving 3534 actual underwater features. Conversely, 487 underwater features were documented in other datasets but not registered by KL04. The screening of all the potential WCPO seamounts produced a final list of 4021 underwater features with agreed upon position and information. This enhanced list should have many applications in oceanography, biodiversity conservation and studies of the influence of seamounts on pelagic ecosystems and fisheries.

  4. Deep-sea macrourid fishes scavenge on plant material: Evidence from in situ observations

    NASA Astrophysics Data System (ADS)

    Jeffreys, Rachel M.; Lavaleye, Marc S. S.; Bergman, Magda J. N.; Duineveld, Gerard C. A.; Witbaard, Rob; Linley, Thom

    2010-04-01

    Deep-sea benthic communities primarily rely on an allochthonous food source. This may be in the form of phytodetritus or as food falls e.g. sinking carcasses of nekton or debris of marine macrophyte algae. Deep-sea macrourids are the most abundant demersal fish in the deep ocean. Macrourids are generally considered to be the apex predators/scavengers in deep-sea communities. Baited camera experiments and stable isotope analyses have demonstrated that animal carrion derived from the surface waters is an important component in the diets of macrourids; some macrourid stomachs also contained vegetable/plant material e.g. onion peels, oranges, algae. The latter observations led us to the question: is plant material an attractive food source for deep-sea scavenging fish? We simulated a plant food fall using in situ benthic lander systems equipped with a baited time-lapse camera. Abyssal macrourids and cusk-eels were attracted to the bait, both feeding vigorously on the bait, and the majority of the bait was consumed in <30 h. These observations indicate (1) plant material can produce an odour plume similar to that of animal carrion and attracts deep-sea fish, and (2) deep-sea fish readily eat plant material. This represents to our knowledge the first in situ documentation of deep-sea fish ingesting plant material and highlights the variability in the scavenging nature of deep-sea fishes. This may have implications for food webs in areas where macrophyte/seagrass detritus is abundant at the seafloor e.g. canyon systems and continental shelves close to seagrass meadows (Bahamas and Mediterranean).

  5. Widespread Miocene deep-sea hiatuses: coincidence with periods of global cooling.

    USGS Publications Warehouse

    Barron, J.A.; Keller, G.

    1982-01-01

    High-resolution biostratigraphic analyses of Miocene deep-sea cores reveal eight intervals of widespread hiatuses in the world ocean. In complete sections these hiatuses correspond to intervals of cool faunal and floral assemblages, rapid enrichment of delta 18O, and sea-level regressions. These factors suggest that Miocene deep-sea hiatuses result from an increased intensity of circulation and corrosiveness of bottom currents during periods of increased polar refrigeration.-Authors

  6. Genomic and population genetic analysis of deep-sea vent chemoautotrophs

    NASA Astrophysics Data System (ADS)

    Nakagawa, S.; Shimamura, S.; Takaki, Y.; Mino, S.; Makita, H.; Sawabe, T.; Takai, K.

    2012-12-01

    Deep-sea vents are the light-independent, highly productive ecosystems driven primarily by chemoautotrophs. Most of the invertebrates thrive there through their relationship with symbiotic chemoautotrophs. Chemoautotrophs are microorganisms that are able to fix inorganic carbon using a chemical energy obtained through the oxidation of reduced compounds. Following the discovery of deep-sea vent ecosystems in 1977, there has been an increasing knowledge that deep-sea vent chemoautotrophs display remarkable physiological and phylogenetic diversity. Recent microbiological studies have led to an emerging view that the majority of deep-sea vent chemoautotrophs have the ability to derive energy from multiple redox couples other than the conventional sulfur-oxygen couple. Genomic, metagenomic and postgenomic studies have considerably accelerated the comprehensive understanding of molecular mechanisms of deep-sea vent chemoautotrophy, even in unculturable endosymbionts of vent fauna. For example, genomic analysis suggested that there were previously unrecognized evolutionary links between deep-sea vent chemoautotrophs and important human/animal pathogens. However, relatively little is known about the genome of horizontally transmitted endosymbionts. In this study, we sequenced whole genomes of the probably horizontally transmitted endosymbionts of two different gastropod species from a deep-sea hydrothermal field, as an effort to address questions about 1) the genome evolution of horizontally transmitted, facultative endosymbionts, 2) their genomic variability, and 3) genetic differences among symbionts of various deep-sea vent invertebrates. Both endosymbiont genomes display features consistent with ongoing genome reduction such as large proportions of pseudogenes and transposable elements. The genomes encode multiple functions for chemoautotrophic respirations, probably reflecting their adaptation to their niches with continuous changes in environmental conditions. When

  7. Reconnaissance dating: a new radiocarbon method applied to assessing the temporal distribution of Southern Ocean deep-sea corals

    USGS Publications Warehouse

    Burke, Andrea; Robinson, Laura F.; McNichol, Ann P.; Jenkins, William J.; Scanlon, Kathryn M.; Gerlach, Dana S.

    2010-01-01

    We have developed a rapid 'reconnaissance' method of preparing graphite for 14C/12C analysis. Carbonate (~15 mg) is combusted using an elemental analyzer and the resulting CO2 is converted to graphite using a sealed tube zinc reduction method. Over 85% (n=45 replicates on twenty-one individual corals) of reconnaissance ages measured on corals ranging in age from 500 to 33,000 radiocarbon years (Ryr) are within two standard deviations of ages generated using standard hydrolysis methods on the same corals, and all reconnaissance ages are within 300 Ryr of the standard hydrolysis ages. Replicate measurements on three individual aragonitic corals yielded ages of 1076±35 Ryr (standard deviation; n=5), 10,739±47 Ryr (n=8), and 40,146±3500 Ryr (n=9). No systematic biases were found using different cleaning methods or variable sample sizes. Analysis of 13C/12C was made concurrently with the 14C/12C measurement to correct for natural fractionation and for fractionation during sample processing and analysis. This technique provides a new, rapid method for making accurate, percent-level 14C/12C analyses that may be used to establish the rates and chronology of earth system processes where survey-type modes of age estimation are desirable. For example, applications may include creation of sediment core-top maps, preliminary age models for sediment cores, and growth rate studies of marine organisms such as corals or mollusks. We applied the reconnaissance method to more than 100 solitary deep-sea corals collected in the Drake Passage in the Southern Ocean to investigate their temporal and spatial distribution. The corals used in this study are part of a larger sample set, and the subset that was dated was chosen based on species as opposed to preservation state, so as to exclude obvious temporal biases. Similar to studies in other regions, the distribution of deep-sea corals is not constant through time across the Drake Passage. Most of the corals from the Burdwood Bank

  8. Reconnaissance dating: A new radiocarbon method applied to assessing the temporal distribution of Southern Ocean deep-sea corals

    NASA Astrophysics Data System (ADS)

    Burke, Andrea; Robinson, Laura F.; McNichol, Ann P.; Jenkins, William J.; Scanlon, Kathryn M.; Gerlach, Dana S.

    2010-11-01

    We have developed a rapid 'reconnaissance' method of preparing graphite for 14C/ 12C analysis. Carbonate (˜15 mg) is combusted using an elemental analyzer and the resulting CO 2 is converted to graphite using a sealed tube zinc reduction method. Over 85% ( n=45 replicates on twenty-one individual corals) of reconnaissance ages measured on corals ranging in age from 500 to 33,000 radiocarbon years (Ryr) are within two standard deviations of ages generated using standard hydrolysis methods on the same corals, and all reconnaissance ages are within 300 Ryr of the standard hydrolysis ages. Replicate measurements on three individual aragonitic corals yielded ages of 1076±35 Ryr (standard deviation; n=5), 10,739±47 Ryr ( n=8), and 40,146±3500 Ryr ( n=9). No systematic biases were found using different cleaning methods or variable sample sizes. Analysis of 13C/ 12C was made concurrently with the 14C/ 12C measurement to correct for natural fractionation and for fractionation during sample processing and analysis. This technique provides a new, rapid method for making accurate, percent-level 14C/ 12C analyses that may be used to establish the rates and chronology of earth system processes where survey-type modes of age estimation are desirable. For example, applications may include creation of sediment core-top maps, preliminary age models for sediment cores, and growth rate studies of marine organisms such as corals or mollusks. We applied the reconnaissance method to more than 100 solitary deep-sea corals collected in the Drake Passage in the Southern Ocean to investigate their temporal and spatial distribution. The corals used in this study are part of a larger sample set, and the subset that was dated was chosen based on species as opposed to preservation state, so as to exclude obvious temporal biases. Similar to studies in other regions, the distribution of deep-sea corals is not constant through time across the Drake Passage. Most of the corals from the Burdwood

  9. Nitratireductor indicus sp. nov., isolated from deep-sea water.

    PubMed

    Lai, Qiliang; Yu, Zhiwei; Yuan, Jun; Sun, Fengqin; Shao, Zongze

    2011-02-01

    A taxonomic study was carried out on a novel bacterial strain, designated C115(T), isolated from a crude-oil-degrading consortium, enriched from deep-sea water of the Indian Ocean. Cells were Gram-negative short rods, mobile by means of a monopolar flagellum. Growth was observed at salinities of 0-7 % and at 10-43 °C. It was unable to degrade Tween 80 or gelatin. 16S rRNA gene sequence analysis showed that strain C115(T) was related most closely to Nitratireductor aquibiodomus NL21(T) (96.5 % similarity), Nitratireductor kimnyeongensis KY 101(T) (96.4 %) and Nitratireductor basaltis J3(T) (96.2 %). The predominant fatty acids were summed feature 8 (C(18 : 1)ω7c and/or C(18 : 1)ω6c, 81.8 %) and C(18 : 0) (7.0 %). The G+C content of the chromosomal DNA of strain C115(T) was 59 mol%. Based on its morphology, physiology and fatty acid composition together with 16S rRNA gene sequence comparisons, the novel strain most appropriately belongs to the genus Nitratireductor, but can be distinguished readily from recognized species of the genus. Strain C115(T) is therefore considered to represent a novel species of the genus Nitratireductor, for which the name Nitratireductor indicus sp. nov. is proposed. The type strain is C115(T) (=RC92-7(T) =CCTCC AB 209298(T) =LMG 25540(T) =MCCC 1A01260(T)).

  10. Parvibaculum indicum sp. nov., isolated from deep-sea water.

    PubMed

    Lai, Qiliang; Wang, Liping; Liu, Yuhui; Yuan, Jun; Sun, Fengqin; Shao, Zongze

    2011-02-01

    A taxonomic study was carried out on strain P31(T), which was isolated from a polycyclic aromatic hydrocarbon (PAH)-degrading consortium enriched with deep-sea water of the Indian Ocean. The isolate was Gram-reaction-negative, rod-shaped, motile by means of a polar flagellum and incapable of reducing nitrate to nitrite. Growth was observed at 0.5-8 % NaCl and at 10-41 °C. Strain P31(T) was unable to degrade Tween 80 or gelatin. The major respiratory quinone was ubiquinone 11 (Q-11). The dominant fatty acids were C(18 : 1)ω7c (39.79 %), 11-methyl C(18 : 1)ω7c (17.84 %), C(19 : 0) cyclo ω8c (12.05 %) and C(18 : 0) (6.09 %). The G+C content of the chromosomal DNA was 62.1 mol%. A phylogenetic tree based on 16S rRNA gene sequence analysis showed that strain P31(T) and Parvibaculum lavamentivorans DS-1(T) formed a distinct lineage in the family Phyllobacteriaceae; these two strains showed 95.7 % sequence similarity, while similarities between P31(T) and other members of the genus Parvibaculum were below 93 %. Based on the genotypic and phenotypic data, strain P31(T) represents a novel species of the genus Parvibaculum, for which the name Parvibaculum indicum sp. nov. is proposed. The type strain is P31(T) (=CCTCC AB 208230(T) =LMG 24712(T) =MCCC 1A01132(T)).

  11. Citreicella marina sp. nov., isolated from deep-sea sediment.

    PubMed

    Lai, Qiliang; Fu, Yuanyuan; Wang, Jianning; Chen, Shuangxi; Zhong, Huanzi; Sun, Fengqin; Shao, Zongze

    2011-04-01

    A taxonomic study was carried out on a novel strain, designated CK-I3-6(T), which was isolated from deep-sea sediment of the south-west Indian Ocean Ridge. Cells were Gram-reaction-negative, oxidase- and catalase-positive, rod-shaped and non-motile. Growth was observed at 4-38 °C and in 1-12 % (w/v) NaCl. Cells were able to degrade gelatin and oxidize thiosulfate but did not reduce nitrate. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain CK-I3-6(T) belonged to the genus Citreicella with a sequence similarity of 97.3 % to Citreicella thiooxidans CHLG 1(T), while similarities with other taxa were <95.7 %. DNA-DNA hybridization showed that strain CK-I3-6(T) and C. thiooxidans CHLG 1(T) showed a low DNA-DNA relatedness (48±3 %). The principal fatty acids were C(16 : 0) (7.8 %), C(18 : 1)ω7c (66.6 %), summed feature 3 (C(16 : 1)ω6c and/or C(16 : 1)ω7c; 6.3 %) and C(19 : 0)ω8c cyclo (10.0 %). The chromosomal DNA G+C content was 67.5 mol%. On the basis of the combined genotypic and phenotypic data, strain CK-I3-6(T) represents a novel species of the genus Citreicella, for which the name Citreicella marina sp. nov. is proposed. The type strain is CK-I3-6(T) ( = CCTCC AB 209064(T)  = LMG 25230(T)  = MCCC 1A03060(T)).

  12. Optimization of DNA Extraction from Deep-sea Basalt

    NASA Astrophysics Data System (ADS)

    Wang, H.; Edwards, K. J.

    2007-12-01

    Studies on the microorganisms that inhabit deep-sea basalt can provide information on this dark ecosystem, which will contribution to our understanding of mass transformation and energy flow in the deep ocean. However, molecular methods for use with metal- and clay-rich rock materials such as basalt have not been suitably developed at present, yet are critically required in order to be able to fully evaluate the basalt biotope. For example, inefficient DNA extraction might lead to loss of information about important components of this community, and misinterpretation about the total community diversity and function. In order to investigate the effects of sample pretreated method, particle size, different DNA extraction methods and cell density on extracted DNA yields, two basalt samples were collected from the East Pacific Rise 9° N during research cruise AT11- 20 in Nov 2004. Basalt samples were crushed to different particle size, washed with ddH2O and 100% ethanol respectively, and autoclaved. Marinobacter aquaeolei cultures with different cell densities were inoculated into differently treated basalt samples. Pure culture and basalt samples without inoculation were used as positive and negative control to evaluate the extracting efficiency. FastDNA spin for soil kit, GeneClean for ancient DNA kit and UltraCleanTM soil DNA Kit are used for DNA extraction. Results showed that DNA yields increased with culture density. FastDNA spin for soil kit gave the highest DNA yields, which is almost 10 times more than that of UltraCleanTM soil DNA Kit. Ethanol washing and ddH2O washing did not make big difference to DNA yields. Mineral composition and surface areas might also affect DNA yields.

  13. Evidence for Permo-Triassic colonization of the deep sea by isopods.

    PubMed

    Lins, Luana S F; Ho, Simon Y W; Wilson, George D F; Lo, Nathan

    2012-12-23

    The deep sea is one of the largest ecosystems on Earth and is home to a highly diverse fauna, with polychaetes, molluscs and peracarid crustaceans as dominant groups. A number of studies have proposed that this fauna did not survive the anoxic events that occurred during the Mesozoic Era. Accordingly, the modern fauna is thought to be relatively young, perhaps having colonized the deep sea after the Eocene/Oligocene boundary. To test this hypothesis, we performed phylogenetic analyses of nuclear ribosomal 18S and 28S and mitochondrial cytochrome oxidase I and 16S sequences from isopod crustaceans. Using a molecular clock calibrated with multiple isopod fossils, we estimated the timing of deep-sea colonization events by isopods. Our results show that some groups have an ancient origin in the deep sea, with the earliest estimated dates spanning 232-314 Myr ago. Therefore, anoxic events at the Permian-Triassic boundary and during the Mesozoic did not cause the extinction of all the deep-sea fauna; some species may have gone extinct while others survived and proliferated. The monophyly of the 'munnopsid radiation' within the isopods suggests that the ancestors of this group evolved in the deep sea and did not move to shallow-water refugia during anoxic events.

  14. Species-energy relationship in the deep sea: A test using the Quaternary fossil record

    USGS Publications Warehouse

    Hunt, G.; Cronin, T. M.; Roy, K.

    2005-01-01

    Little is known about the processes regulating species richness in deep-sea communities. Here we take advantage of natural experiments involving climate change to test whether predictions of the species-energy hypothesis hold in the deep sea. In addition, we test for the relationship between temperature and species richness predicted by a recent model based on biochemical kinetics of metabolism. Using the deep-sea fossil record of benthic foraminifera and statistical meta-analyses of temperature-richness and productivity-richness relationships in 10 deep-sea cores, we show that temperature but not productivity is a significant predictor of species richness over the past c. 130 000 years. Our results not only show that the temperature-richness relationship in the deep-sea is remarkably similar to that found in terrestrial and shallow marine habitats, but also that species richness tracks temperature change over geological time, at least on scales of c. 100 000 years. Thus, predicting biotic response to global climate change in the deep sea would require better understanding of how temperature regulates the occurrences and geographical ranges of species. ??2005 Blackwell Publishing Ltd/CNRS.

  15. Virus decomposition provides an important contribution to benthic deep-sea ecosystem functioning.

    PubMed

    Dell'Anno, Antonio; Corinaldesi, Cinzia; Danovaro, Roberto

    2015-04-21

    Viruses are key biological agents of prokaryotic mortality in the world oceans, particularly in deep-sea ecosystems where nearly all of the prokaryotic C production is transformed into organic detritus. However, the extent to which the decomposition of viral particles (i.e., organic material of viral origin) influences the functioning of benthic deep-sea ecosystems remains completely unknown. Here, using various independent approaches, we show that in deep-sea sediments an important fraction of viruses, once they are released by cell lysis, undergo fast decomposition. Virus decomposition rates in deep-sea sediments are high even at abyssal depths and are controlled primarily by the extracellular enzymatic activities that hydrolyze the proteins of the viral capsids. We estimate that on a global scale the decomposition of benthic viruses releases ∼37-50 megatons of C per year and thus represents an important source of labile organic compounds in deep-sea ecosystems. Organic material released from decomposed viruses is equivalent to 3 ± 1%, 6 ± 2%, and 12 ± 3% of the input of photosynthetically produced C, N, and P supplied through particles sinking to bathyal/abyssal sediments. Our data indicate that the decomposition of viruses provides an important, previously ignored contribution to deep-sea ecosystem functioning and has an important role in nutrient cycling within the largest ecosystem of the biosphere.

  16. Molluskan species richness and endemism on New Caledonian seamounts: Are they enhanced compared to adjacent slopes?

    NASA Astrophysics Data System (ADS)

    Castelin, Magalie; Puillandre, Nicolas; Lozouet, Pierre; Sysoev, Alexander; de Forges, Bertrand Richer; Samadi, Sarah

    2011-06-01

    Seamounts were often considered as 'hotspots of diversity' and 'centers of endemism', but recently this opinion has been challenged. After 25 years of exploration and the work of numerous taxonomists, the Norfolk Ridge (Southwest Pacific) is probably one of the best-studied seamount chains worldwide. However, even in this intensively explored area, the richness and the geographic patterns of diversity are still poorly characterized. Among the benthic organisms, the post-mortem remains of mollusks can supplement live records to comprehensively document geographical distributions. Moreover, the accretionary growth of mollusk shells informs us about the life span of the pelagic larva. To compare diversity and level of endemism between the Norfolk Ridge seamounts and the continental slopes of New Caledonia we used species occurrence data drawn from (i) the taxonomic literature on mollusks and (ii) a raw dataset of mainly undescribed deep-sea species of the hyperdiverse Turridae. Patterns of endemism and species richness were analyzed through quantitative indices of endemism and species richness estimator metrics. To date, 403 gastropods and bivalves species have been recorded on the Norfolk Ridge seamounts. Of these, at least 38 species (˜10%) are potentially endemic to the seamounts and nearly all of 38 species have protoconchs indicating lecithotrophic larval development. Overall, our results suggest that estimates of species richness and endemism, when sampling effort is taken into account, were not significantly different between slopes and seamounts. By including in our analyses 347 undescribed morphospecies from the Norfolk Ridge, our results also demonstrate the influence of taxonomic bias on our estimates of species richness and endemism.

  17. The ecology of xenophyophores (Protista) on eastern Pacific seamounts

    NASA Astrophysics Data System (ADS)

    Levin, Lisa A.; Thomas, Cynthia L.

    1988-12-01

    Large, agglutinating protozoans of the class Xenophyophorea are the dominant epifaunal organisms on soft and hard substrates of many bathyal seamounts in the eastern Pacific Ocean off Mexico. Observations made with the submersible Alvin and remotely towed camera sleds on 17 seamounts at 31°, 20°, 13° and 10°N revealed more than ten distinct xenophyophore test morphologies. Most of these appear to represent previously undescribed species. Reticulate forms are numerically dominant at 20°, 13° and 10°N. Xenophyophore abundances increase with decreasing latitude, being rare at 30°N, present at densities of 0.1-1.0 m -2 at 20° and 13°N and often exceeding 1.0 m -2 at 10°N, occasionally reaching 10-18 m -2. Highest concentrations are observed on caldera floors near the base of steep caldera walls, at depths between 1700 and 2500 m. Most individuals select sand-size pelagic foraminiferan tests (63-500 μm) and exclude pebble, silt and clay-size particles for test construction. Xenophyophore on seamounts modify the structure of metazoan communities and may play a role in maintenance of infaunal diversity. Twenty-seven xenophyophore tests were found to provide habitat for 16 major macrofaunal taxa (152 individuals) and three meiofaunal taxa (333 individuals). The presence of xenophyophores also enhances the abundance of isopods, tanaids, ophiuroids, nematodes and harpacticoid copepods dwelling in sediments surrounding the tests. Mobile megafauna are attracted to sediment beneath and adjacent to xenophyophores. We suggest that xenophyophores, which are abundant on many topographic features in deep water (e.g. guyots, trenches, canyons and continental slopes), are a functionally important component of deep-sea benthic communities and require further autecological and synecological investigation.

  18. The Eratosthenes Seamount - Eastern Mediterranean

    NASA Astrophysics Data System (ADS)

    Ehrhardt, A.; Schnabel, M.; Damm, V.

    2012-04-01

    The Eratosthenes Seamount forms a prominent landmark in the Eastern Mediterranean. It is located south of Cyprus with the Levantine Basin on its eastern side, the Herodotus Basin on its western side and the Nile Cone south of the seamount. The Eratosthenes Seamount rises up to 750 m below sea surface and is about 1200 m higher than the surrounding seafloor of the Levantine Basin and the Nile Cone sediments. The Eratosthenes Seamount is considered as a continental fragment of the former African-Nubian Plate that was rifted to its present position relative to Africa during the formation of the Tethyan Ocean. In 2010 a detailed geophysical survey was carried out in the area of the Eratosthenes Seamount by the Federal Institute for Geosciences and Natural Resources of Germany including multichannel seismic (MCS), refraction seismics, magnetic, gravity and magnetotelluric data acquisition. First results show a highly deformed seamount, with a plateau-like top that is impacted by west-east trending graben formation. The slopes of the seamount are eroded showing deep incised ripple patterns and recent submarine landslides. The Eratosthenes Seamount produces also a prominent magnetic and gravity anomaly, both supporting its uniqueness in the area of the Eastern Mediterranean. Velocity information by refraction seismic modeling, as well as the models of the magnetic and gravity data show evidence for a volcanic core of the seamount with carbonate layers on top of the volcanic core. The slopes of the seamount terminate against a conspicuous rim-like escarpment that forms in addition the northern and western termination of the Messinian Evaporites in the study area. The MCS and refraction seismic data show a very deep Levantine Basin with maximum acoustic basement depths of 12 to 14 km very close to the slope of the Eratosthenes Seamount. The deepest sediments resolved by the MCS data are of Lower Cretaceous to Jurassic age. The refraction seismic model shows a 14 km thick

  19. [Microbial diversity of deep-sea extremophiles--Piezophiles, Hyperthermophiles, and subsurface microorganisms].

    PubMed

    Kato, C; Takai, K

    2000-12-01

    Knowledge of our Planet's biosphere has increased tremendously during the last 10 to 20 years. In the field of Microbiology in particular, scientists have discovered novel "extremophiles", microorganisms capable of living in extreme environments such as highly acidic or alkaline conditions, at high salt concentration, with no oxygen, extreme temperatures (as low as -20 degrees C and as high as 300 degrees C), at high concentrations of heavy metals and in high pressure environments such as the deep-sea. It is apparent that microorganisms can exist in any extreme environment of the Earth, yet already scientists have started to look for life on other planets; the so-called "Exobiology" project. But as yet we have little knowledge of the deep-sea and subsurface biosphere of our own planet. We believe that we should elucidate the Biodiversity of Earth more thoroughly before exploring life on other planets, and these attempts would provide deeper insight into clarifying the existence of extraterrestrial life. We focused on two deep-sea extremophiles in this article; one is "Piezophiles", and another is "Hyperthermophiles". Piezophiles are typical microorganisms adapted to high-pressure and cold temperature environments, and located in deep-sea bottom. Otherwise, hyperthermophiles are living in high temperature environment, and located at around the hydrothermal vent systems in deep-sea. They are not typical deep-sea microorganisms, but they can grow well at high-pressure condition, just like piezophiles. Deming and Baross mentioned that most of the hyperthermophilic archaea isolated from deep-sea hydrothermal vents are able to grow under conditions of high temperature and pressure, and in most cases their optimal pressure for growth was greater than the environmental pressure they were isolated from. It is possible that originally their native environment may have been deeper than the sea floor and that there had to be a deeper biosphere. This implication suggests that

  20. Hydrothermal mixing: Fuel for life in the deep-sea

    NASA Astrophysics Data System (ADS)

    Hentscher, M.; Bach, W.; Amend, J.; McCollom, T.

    2009-04-01

    Deep-sea hydrothermal vent systems show a wide range of fluid compositions and temperatures. They reach from highly alkaline and reducing, like the Lost City hydrothermal field, to acidic and reducing conditions, (e. g., the Logatchev hydrothermal field) to acidic and oxidizing conditions (e. g., island arc hosted systems). These apparently hostile vent systems are generally accompanied by high microbial activity forming the base of a food-web that often includes higher organisms like mussels, snails, or shrimp. The primary production is boosted by mixing of chemically reduced hydrothermal vent fluids with ambient seawater, which generates redox disequilibria that serve as energy source for chemolithoautotrophic microbial life. We used geochemical reaction path models to compute the affinities of catabolic (energy-harvesting) and anabolic (biosynthesis) reactions along trajectories of batch mixing between vent fluids and 2 °C seawater. Geochemical data of endmember hydrothermal fluids from 12 different vent fields (Lost City, Rainbow, Logatchev, TAG, EPR 21 °N, Manus Basin, Mariana Arc, etc.) were included in this reconnaissance study of the variability in metabolic energetics in global submarine vent systems. The results show a distinction between ultramafic-hosted and basalt-hosted hydrothermal systems. The highest energy yield for chemolithotrophic catabolism in ultramafic-hosted hydrothermal systems is reached at low temperature and under slightly aerobic to aerobic conditions. The dominant reactions, for example at Rainbow or Lost City, are the oxidation of H2, Fe2+ and methane. At temperatures >60 °C, anaerobic metabolic reactions, e. g., sulphate reduction and methanogenesis, become more profitable. In contrast, basalt-hosted systems, such as TAG and 21 °N EPR uniformly indicate H2S oxidation to be the catabolically dominant reaction over the entire microbial-relevant temperature range. Affinities were calculated for the formation of individual cellular

  1. Paleomagnetic study of antarctic deep-sea cores.

    PubMed

    Opdyke, N D; Glass, B; Hays, J D; Foster, J

    1966-10-21

    detritus, approximately 2.5 million years ago. One can also calculate rates of sedi mentation, which vary in the cores studied from 1.1 to about 8.0 millimeters per 1000 years. Sedimentation rates for the Indian Ocean cores are higher than for the Bellingshausen Sea cores. The near coincidence of faunal changes and reversals in the cores suggests but does not prove a causal relation. We conclude from this study that paleomagnetic stratigraphy is a unique method for correlating and dating deep sea cores, and that future work with such cores may provide a complete or nearly complete record of the history of the earth's magnetic field beyond 4 million years.

  2. Global distribution of seamounts from Seasat profiles

    NASA Technical Reports Server (NTRS)

    Craig, Claire H.; Sandwell, David T.

    1988-01-01

    A new measurement techique based on a model of a Gaussian seamount loading a thin elastic lithosphere was developed to analyze seamounts that, until then, were not surveyed or seamounts with poor bathymetric coverage. The model predicts that the seamount diameter is equal to the peak-to-trough distance along the vertical deflection profile and that the flexural diameter of a seamount is related to the age of the lithosphere when the seamount formed. This model also suggests that these two measurements are relatively insensitive to the cross-track location from the seamount. These model predictions were confirmed using Seasat altimeter profiles crossing 14 surveyed seamounts in the Pacific. The analysis of the seamount distribution indicated considerable variations in population density and type across the oceans. Most notable among them are the absence of seamounts in the Atlantic, variations in population density across large fracture zones in the Pacific, and the prevalence of small signatures in the Indian Ocean.

  3. Temporal patterns in the acoustic signals of beaked whales at Cross Seamount.

    PubMed

    Johnston, D W; McDonald, M; Polovina, J; Domokos, R; Wiggins, S; Hildebrand, J

    2008-04-23

    Seamounts may influence the distribution of marine mammals through a combination of increased ocean mixing, enhanced local productivity and greater prey availability. To study the effects of seamounts on the presence and acoustic behaviour of cetaceans, we deployed a high-frequency acoustic recording package on the summit of Cross Seamount during April through October 2005. The most frequently detected cetacean vocalizations were echolocation sounds similar to those produced by ziphiid and mesoplodont beaked whales together with buzz-type signals consistent with prey-capture attempts. Beaked whale signals occurred almost entirely at night throughout the six-month deployment. Measurements of prey presence with a Simrad EK-60 fisheries acoustics echo sounder indicate that Cross Seamount may enhance local productivity in near-surface waters. Concentrations of micronekton were aggregated over the seamount in near-surface waters at night, and dense concentrations of nekton were detected across the surface of the summit. Our results suggest that seamounts may provide enhanced foraging opportunities for beaked whales during the night through a combination of increased productivity, vertical migrations by micronekton and local retention of prey. Furthermore, the summit of the seamount may act as a barrier against which whales concentrate prey.

  4. Seasonal changes in fish assemblage structure at a shallow seamount in the Gulf of California.

    PubMed

    Jorgensen, Salvador J; Klimley, A Peter; Muhlia-Melo, Arturo; Morgan, Steven G

    2016-01-01

    Seamounts have generally been identified as locations that can promote elevated productivity, biomass and predator biodiversity. These properties attract seamount-associated fisheries where elevated harvests can be obtained relative to surrounding areas. There exists large variation in the geological and oceanographic environment among the thousands of locations that fall within the broad definition of seamount. Global seamount surveys have revealed that not all seamounts are hotspots of biodiversity, and there remains a strong need to understand the mechanisms that underlie variation in species richness observed. We examined the process of fish species assembly at El Bajo Espiritu Santo (EBES) seamount in the Gulf of California over a five-year study period. To effectively quantify the relative abundance of fast-moving and schooling fishes in a 'blue water' habitat, we developed a simplified underwater visual census (UVC) methodology and analysis framework suitable for this setting and applicable to future studies in similar environments. We found correlations between seasonally changing community structure and variability in oceanographic conditions. Individual species responses to thermal habitat at EBES revealed three distinct assemblages, a 'fall assemblage' tracking warmer overall temperature, a 'spring assemblage' correlated with cooler temperature, and a 'year-round assemblage' with no significant response to temperature. Species richness was greatest in spring, when cool and warm water masses stratified the water column and a greater number of species from all three assemblages co-occurred. We discuss our findings in the context of potential mechanisms that could account for predator biodiversity at shallow seamounts.

  5. Characterization of Dissolved Organic Matter from Deep-sea Floor Hydrothermal Vents in South Mariana Backarc Spreading Center

    NASA Astrophysics Data System (ADS)

    Kitajima, F.; Yamanaka, T.

    2004-12-01

    In South Mariana Backarc Spreading Center, a few active hydrothermal fields are located. We investigated a characterization of dissolved organic matter (DOM) from hydrothermal vents in this area, in order to clarify the biosphere beneath deep-sea floor. Hot water sample was collected from a drilled hole (APM01 located in Fryer site, 12o 55.22fN, 143o 37.16fE, depth 2850m) during the ROPOS/TN167A cruise in March 2004. The hole had been drilled during Hakurei-Maru 2 cruise in January 2004. Another hot water sample was collected from a natural black smoker located in Pika site (12o 55.15fN, 143o 36.96fE, depth 2773m) during YK03-09 cruise. In this investigation, we developed a standalone filtration system in order to collect and enrich dissolved organic matter of quite low concentration. This system was designed to be put near hydrothermal vents for at least 24h. This system has an ODS disk (EmporeTM High Performance Extraction Disk C18 90mmφ) with a pre-filter (Whatman GMF 1 μ)m filter paper) to adsorb dilute organics. We collected DOM from the APM01 casing pipe for about 30h (Tmax = 25-30 o C, the estimated volume of filtrated water is max. 300L) using this filtration system. Adsorbed organics were eluted with methanol for 12h twice and toluene once using soxhlet extractor. Recovered amounts of methanol eluents are 72.8mg for APM01, and 89.7mg for the black smoker. Prior to GCMS analysis, we carried out high resolution 1 H-NMR measurement (400MHz), together with the DOM samples collected from the Suiyo Seamount in July-August 2001 and August 2002. Most of the samples show signals in the region of 3-4 ppm, and the samples from the vents of relatively low temperatures (APM01 and AP04: the natural vent at the Suiyo Seamount, temperature 8-48o C ) show signals also in the region of 0.8-1.6 ppm.

  6. Heterogeneity and lithotype distribution in ancient deep-sea canyons: Point Lobos deep-sea canyon as a reservoir analogue

    NASA Astrophysics Data System (ADS)

    Cronin, Bryan T.; Kidd, Robert B.

    1998-01-01

    An evolution and history of filling is proposed for an exceptionally exposed ancient deep-sea canyon on a Paleocene oblique-slip tectonic margin which, on a number of scales, reveals, successive phases of canyon activity. The quantitative methods adopted for this study make it of direct use to modellers as an example of reservoir heterogeneity in an ancient canyon fill, where facies distribution from boreholes can be scaled up to reconstruct the reservoir, using the methods outlined in this paper. The Point Lobos submarine canyon, near Carmel in California, provides a complete cross-section of an ancient canyon, with a fill which displays a whole range of channel morphologies, and laterally extensive coverage of the internal architecture of associated conglomerate packages and related debris flows. This paper presents quantitative documentation of the canyon-fill sediments and canyon-wide fill packages, on scales which vary from bed-to-bed analysis, reflecting processes in operation during individual events, to canyon-wide analysis, reflecting the overall evolution of the canyon. The northern and southern canyon margins are both exposed, and the Paleocene fill onlaps the subvertical canyon wall. The canyon was incised into Cretaceous granodiorite. The fill comprises five thick sequences which correspond to five successive phases of sediment deposition within the canyon. Each sequence typically consists of resedimented conglomerates that are stacked and channelised, with a vertical architecture which resembles that of subaerial braided stream deposits. These are overlain by channelised turbidite sandstones, interbedded with intraformational conglomerates and mud-chip breccias. These in turn are overlain by mudstones and shales, which are commonly slumped and disturbed. Published classification schemes that show the range of deep-water facies were found insufficient to describe the Point Lobos canyon fill. Methods were developed for recording the lithologic

  7. Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea

    PubMed Central

    Sapir, Amir; Dillman, Adler R.; Connon, Stephanie A.; Grupe, Benjamin M.; Ingels, Jeroen; Mundo-Ocampo, Manuel; Levin, Lisa A.; Baldwin, James G.; Orphan, Victoria J.; Sternberg, Paul W.

    2013-01-01

    The deep sea is Earth's largest habitat but little is known about the nature of deep-sea parasitism. In contrast to a few characterized cases of bacterial and protistan parasites, the existence and biological significance of deep-sea parasitic fungi is yet to be understood. Here we report the discovery of a fungus-related parasitic microsporidium, Nematocenator marisprofundi n. gen. n. sp. that infects benthic nematodes at methane seeps on the Pacific Ocean floor. This infection is species-specific and has been temporally and spatially stable over 2 years of sampling, indicating an ecologically consistent host-parasite interaction. A high distribution of spores in the reproductive tracts of infected males and females and their absence from host nematodes' intestines suggests a sexual transmission strategy in contrast to the fecal-oral transmission of most microsporidia. N. marisprofundi targets the host's body wall muscles causing cell lysis, and in severe infection even muscle filament degradation. Phylogenetic analyses placed N. marisprofundi in a novel and basal clade not closely related to any described microsporidia clade, suggesting either that microsporidia-nematode parasitism occurred early in microsporidia evolution or that host specialization occurred late in an ancient deep-sea microsporidian lineage. Our findings reveal that methane seeps support complex ecosystems involving interkingdom interactions between bacteria, nematodes, and parasitic fungi and that microsporidia parasitism exists also in the deep-sea biosphere. PMID:24575084

  8. Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea.

    PubMed

    Sapir, Amir; Dillman, Adler R; Connon, Stephanie A; Grupe, Benjamin M; Ingels, Jeroen; Mundo-Ocampo, Manuel; Levin, Lisa A; Baldwin, James G; Orphan, Victoria J; Sternberg, Paul W

    2014-01-01

    The deep sea is Earth's largest habitat but little is known about the nature of deep-sea parasitism. In contrast to a few characterized cases of bacterial and protistan parasites, the existence and biological significance of deep-sea parasitic fungi is yet to be understood. Here we report the discovery of a fungus-related parasitic microsporidium, Nematocenator marisprofundi n. gen. n. sp. that infects benthic nematodes at methane seeps on the Pacific Ocean floor. This infection is species-specific and has been temporally and spatially stable over 2 years of sampling, indicating an ecologically consistent host-parasite interaction. A high distribution of spores in the reproductive tracts of infected males and females and their absence from host nematodes' intestines suggests a sexual transmission strategy in contrast to the fecal-oral transmission of most microsporidia. N. marisprofundi targets the host's body wall muscles causing cell lysis, and in severe infection even muscle filament degradation. Phylogenetic analyses placed N. marisprofundi in a novel and basal clade not closely related to any described microsporidia clade, suggesting either that microsporidia-nematode parasitism occurred early in microsporidia evolution or that host specialization occurred late in an ancient deep-sea microsporidian lineage. Our findings reveal that methane seeps support complex ecosystems involving interkingdom interactions between bacteria, nematodes, and parasitic fungi and that microsporidia parasitism exists also in the deep-sea biosphere.

  9. Genetic diversity of archaea in deep-sea hydrothermal vent environments.

    PubMed

    Takai, K; Horikoshi, K

    1999-08-01

    Molecular phylogenetic analysis of naturally occurring archaeal communities in deep-sea hydrothermal vent environments was carried out by PCR-mediated small subunit rRNA gene (SSU rDNA) sequencing. As determined through partial sequencing of rDNA clones amplified with archaea-specific primers, the archaeal populations in deep-sea hydrothermal vent environments showed a great genetic diversity, and most members of these populations appeared to be uncultivated and unidentified organisms. In the phylogenetic analysis, a number of rDNA sequences obtained from deep-sea hydrothermal vents were placed in deep lineages of the crenarchaeotic phylum prior to the divergence of cultivated thermophilic members of the crenarchaeota or between thermophilic members of the euryarchaeota and members of the methanogen-halophile clade. Whole cell in situ hybridization analysis suggested that some microorganisms of novel phylotypes predicted by molecular phylogenetic analysis were likely present in deep-sea hydrothermal vent environments. These findings expand our view of the genetic diversity of archaea in deep-sea hydrothermal vent environments and of the phylogenetic organization of archaea.

  10. Distinctive Microbial Community Structure in Highly Stratified Deep-Sea Brine Water Columns

    PubMed Central

    Bougouffa, S.; Yang, J. K.; Lee, O. O.; Wang, Y.; Batang, Z.; Al-Suwailem, A.

    2013-01-01

    Atlantis II and Discovery are two hydrothermal and hypersaline deep-sea pools in the Red Sea rift that are characterized by strong thermohalo-stratification and temperatures steadily peaking near the bottom. We conducted comprehensive vertical profiling of the microbial populations in both pools and highlighted the influential environmental factors. Pyrosequencing of the 16S rRNA genes revealed shifts in community structures vis-à-vis depth. High diversity and low abundance were features of the deepest convective layers despite the low cell density. Surprisingly, the brine interfaces had significantly higher cell counts than the overlying deep-sea water, yet they were lowest in diversity. Vertical stratification of the bacterial populations was apparent as we moved from the Alphaproteobacteria-dominated deep sea to the Planctomycetaceae- or Deferribacteres-dominated interfaces to the Gammaproteobacteria-dominated brine layers. Archaeal marine group I was dominant in the deep-sea water and interfaces, while several euryarchaeotic groups increased in the brine. Across sites, microbial phylotypes and abundances varied substantially in the brine interface of Discovery compared with Atlantis II, despite the near-identical populations in the overlying deep-sea waters. The lowest convective layers harbored interestingly similar microbial communities, even though temperature and heavy metal concentrations were very different. Multivariate analysis indicated that temperature and salinity were the major influences shaping the communities. The harsh conditions and the low-abundance phylotypes could explain the observed correlation in the brine pools. PMID:23542623

  11. Effects of hydrostatic pressure on yeasts isolated from deep-sea hydrothermal vents.

    PubMed

    Burgaud, Gaëtan; Hué, Nguyen Thi Minh; Arzur, Danielle; Coton, Monika; Perrier-Cornet, Jean-Marie; Jebbar, Mohamed; Barbier, Georges

    2015-11-01

    Hydrostatic pressure plays a significant role in the distribution of life in the biosphere. Knowledge of deep-sea piezotolerant and (hyper)piezophilic bacteria and archaea diversity has been well documented, along with their specific adaptations to cope with high hydrostatic pressure (HHP). Recent investigations of deep-sea microbial community compositions have shown unexpected micro-eukaryotic communities, mainly dominated by fungi. Molecular methods such as next-generation sequencing have been used for SSU rRNA gene sequencing to reveal fungal taxa. Currently, a difficult but fascinating challenge for marine mycologists is to create deep-sea marine fungus culture collections and assess their ability to cope with pressure. Indeed, although there is no universal genetic marker for piezoresistance, physiological analyses provide concrete relevant data for estimating their adaptations and understanding the role of fungal communities in the abyss. The present study investigated morphological and physiological responses of fungi to HHP using a collection of deep-sea yeasts as a model. The aim was to determine whether deep-sea yeasts were able to tolerate different HHP and if they were metabolically active. Here we report an unexpected taxonomic-based dichotomic response to pressure with piezosensitve ascomycetes and piezotolerant basidiomycetes, and distinct morphological switches triggered by pressure for certain strains.

  12. Deep-sea hydrothermal vents: potential hot spots for natural products discovery?

    PubMed

    Thornburg, Christopher C; Zabriskie, T Mark; McPhail, Kerry L

    2010-03-26

    Deep-sea hydrothermal vents are among the most extreme and dynamic environments on Earth. However, islands of highly dense and biologically diverse communities exist in the immediate vicinity of hydrothermal vent flows, in stark contrast to the surrounding bare seafloor. These communities comprise organisms with distinct metabolisms based on chemosynthesis and growth rates comparable to those from shallow water tropical environments, which have been rich sources of biologically active natural products. The geological setting and geochemical nature of deep-sea vents that impact the biogeography of vent organisms, chemosynthesis, and the known biological and metabolic diversity of Eukarya, Bacteria, and Archaea, including the handful of natural products isolated to date from deep-sea vent organisms, are considered here in an assessment of deep-sea hydrothermal vents as potential hot spots for natural products investigations. Of critical importance too are the logistics of collecting deep vent organisms, opportunities for re-collection considering the stability and longevity of vent sites, and the ability to culture natural product-producing deep vent organisms in the laboratory. New cost-effective technologies in deep-sea research and more advanced molecular techniques aimed at screening a more inclusive genetic assembly are poised to accelerate natural product discoveries from these microbial diversity hot spots.

  13. Latitudinal gradients of species richness in the deep-sea benthos of the North Atlantic.

    PubMed

    Rex, M A; Stuart, C T; Coyne, G

    2000-04-11

    Latitudinal species diversity gradients (LSDGs) in the Northern Hemisphere are the most well established biogeographic patterns on Earth. Despite long-standing interest in LSDGs as a central problem in ecology, their explanation remains uncertain. In terrestrial as well as coastal and pelagic marine ecosystems, these poleward declines in diversity typically have been represented and interpreted in terms of species richness, the number of coexisting species. Newly discovered LSDGs in the bathyal (500-4,000 m) benthos of the North Atlantic may help to resolve the underlying causes of these large-scale trends because the deep sea is such a physically distinct environment. However, a major problem in comparing surface and deep-sea LSDGs is that the latter have been measured differently, by using species diversity indices that are affected by both species richness and the evenness of relative abundance. Here, we demonstrate that deep-sea isopods, gastropods, and bivalves in the North Atlantic do exhibit poleward decreases in species richness, just as those found in other environments. A comprehensive systematic revision of the largest deep-sea gastropod family (Turridae) has provided a unique database on geographic distributions that is directly comparable to those used to document LSDGs in surface biotas. This taxon also shows a poleward decline in the number of species. Seasonal organic enrichment from sinking phytodetritus is the most plausible ecological explanation for deep-sea LSDGs and is the environmental factor most consistently associated with depressed diversity in a variety of bathyal habitats.

  14. Global pulses of organic carbon burial in deep-sea sediments during glacial maxima

    PubMed Central

    Cartapanis, Olivier; Bianchi, Daniele; Jaccard, Samuel L.; Galbraith, Eric D.

    2016-01-01

    The burial of organic carbon in marine sediments removes carbon dioxide from the ocean–atmosphere pool, provides energy to the deep biosphere, and on geological timescales drives the oxygenation of the atmosphere. Here we quantify natural variations in the burial of organic carbon in deep-sea sediments over the last glacial cycle. Using a new data compilation of hundreds of sediment cores, we show that the accumulation rate of organic carbon in the deep sea was consistently higher (50%) during glacial maxima than during interglacials. The spatial pattern and temporal progression of the changes suggest that enhanced nutrient supply to parts of the surface ocean contributed to the glacial burial pulses, with likely additional contributions from more efficient transfer of organic matter to the deep sea and better preservation of organic matter due to reduced oxygen exposure. These results demonstrate a pronounced climate sensitivity for this global carbon cycle sink. PMID:26923945

  15. Archaeal diversity and community development in deep-sea hydrothermal vents.

    PubMed

    Takai, Ken; Nakamura, Kentaro

    2011-06-01

    Over the past 35 years, researchers have explored deep-sea hydrothermal vent environments around the globe and studied a number of archaea, their unique metabolic and physiological properties, and their vast phylogenetic diversity. Although the pace of discovery of new archaeal taxa, phylotypes and phenotypes in deep-sea hydrothermal vents has slowed recently, bioinformatics and interdisciplinary geochemistry-microbiology approaches are providing new information on the diversity and community composition of archaea living in deep-sea vents. Recent investigations have revealed that archaea could have originated and dispersed from ancestral communities endemic to hydrothermal vents into other biomes on Earth, and the community structure and productivity of chemolithotrophic archaea are controlled primarily by variations in the geochemical composition of hydrothermal fluids.

  16. Macroecological drivers of archaea and bacteria in benthic deep-sea ecosystems.

    PubMed

    Danovaro, Roberto; Molari, Massimiliano; Corinaldesi, Cinzia; Dell'Anno, Antonio

    2016-04-01

    Bacteria and archaea dominate the biomass of benthic deep-sea ecosystems at all latitudes, playing a crucial role in global biogeochemical cycles, but their macroscale patterns and macroecological drivers are still largely unknown. We show the results of the most extensive field study conducted so far to investigate patterns and drivers of the distribution and structure of benthic prokaryote assemblages from 228 samples collected at latitudes comprising 34°N to 79°N, and from ca. 400- to 5570-m depth. We provide evidence that, in deep-sea ecosystems, benthic bacterial and archaeal abundances significantly increase from middle to high latitudes, with patterns more pronounced for archaea, and particularly for Marine Group I Thaumarchaeota. Our results also reveal that different microbial components show varying sensitivities to changes in temperature conditions and food supply. We conclude that climate change will primarily affect deep-sea benthic archaea, with important consequences on global biogeochemical cycles, particularly at high latitudes.

  17. Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

    SciTech Connect

    Lu, Z.; Deng, Y.; Nostrand, J.D. Van; He, Z.; Voordeckers, J.; Zhou, A.; Lee, Y.-J.; Mason, O.U.; Dubinsky, E.; Chavarria, K.; Tom, L.; Fortney, J.; Lamendella, R.; Jansson, J.K.; D?haeseleer, P.; Hazen, T.C.; Zhou, J.

    2011-06-15

    The Deepwater Horizon oil spill in the Gulf of Mexico is the deepest and largest offshore spill in U.S. history and its impacts on marine ecosystems are largely unknown. Here, we showed that the microbial community functional composition and structure were dramatically altered in a deep-sea oil plume resulting from the spill. A variety of metabolic genes involved in both aerobic and anaerobic hydrocarbon degradation were highly enriched in the plume compared to outside the plume, indicating a great potential for intrinsic bioremediation or natural attenuation in the deep-sea. Various other microbial functional genes relevant to carbon, nitrogen, phosphorus, sulfur and iron cycling, metal resistance, and bacteriophage replication were also enriched in the plume. Together, these results suggest that the indigenous marine microbial communities could play a significant role in biodegradation of oil spills in deep-sea environments.

  18. Spatial distribution of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems.

    PubMed

    Takai, Ken; Oida, Hanako; Suzuki, Yohey; Hirayama, Hisako; Nakagawa, Satoshi; Nunoura, Takuro; Inagaki, Fumio; Nealson, Kenneth H; Horikoshi, Koki

    2004-04-01

    Distribution profiles of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems were mapped with culture-independent molecular techniques. Planktonic samples were obtained from the waters surrounding two geographically and geologically distinct hydrothermal systems, and the abundance of marine crenarchaeota group I was examined by 16S ribosomal DNA clone analysis, quantitative PCR, and whole-cell fluorescence in situ hybridization. A much higher proportion of marine crenarchaeota group I within the microbial community was detected in deep-sea hydrothermal environments than in normal deep and surface seawaters. The highest proportion was always obtained from the ambient seawater adjacent to hydrothermal emissions and chimneys but not from the hydrothermal plumes. These profiles were markedly different from the profiles of epsilon-Proteobacteria, which are abundant in the low temperatures of deep-sea hydrothermal environments.

  19. Taxonomic revision of deep-sea Ostracoda from the Arctic Ocean

    USGS Publications Warehouse

    Yasuhara, Moriaki; Stepanova, Anna; Okahashi, Hisayo; Cronin, Thomas M.; Brouwers, Elisabeth M.

    2015-01-01

    Taxonomic revision of deep-sea Ostracoda from the Arctic Ocean was conducted to reduce taxonomic uncertainty that will improve our understanding of species ecology, biogeography and relationship to faunas from other deep-sea regions. Fifteen genera and 40 species were examined and (re-)illustrated with high-resolution scanning electron microscopy images, covering most of known deep-sea species in the central Arctic Ocean. Seven new species are described: Bythoceratina lomonosovensis n. sp., Cytheropteron parahamatum n. sp., Cytheropteron lanceae n. sp.,Cytheropteron irizukii n. sp., Pedicythere arctica n. sp., Cluthiawhatleyi n. sp., Krithe hunti n. sp. This study provides a robust taxonomic baseline for application to paleoceanographical reconstruction and biodiversity analyses in this climatically sensitive region.

  20. The first records of deep-sea fauna - a correction and discussion

    NASA Astrophysics Data System (ADS)

    Etter, W.; Hess, H.

    2015-06-01

    The soundings in deep waters of Baffin Bay, together with the recovery of a basket star by John Ross in 1818, was a milestone in the history of deep-sea research. Although the alleged water depths of up to 1950 m were by far not reached, these were nevertheless the first soundings in deep bathyal (to perhaps uppermost abyssal) depths. Furthermore, the recovery of a benthic animal proved that animal life existed at great depths. Yet this was not the first published record of deep-sea fauna as it is often portrayed. This merit goes to accidental catches of the stalked crinoid Cenocrinus asterius that were recovered with fishing lines from upper bathyal environments near Antillean islands. In addition, the description of several deep-sea fishes considerably predated the John Ross episode.

  1. Reviews and syntheses: the first records of deep-sea fauna - a correction and discussion

    NASA Astrophysics Data System (ADS)

    Etter, W.; Hess, H.

    2015-11-01

    The soundings in deep waters of Baffin Bay, together with the recovery of a basket star by John Ross in 1818, was a milestone in the history of deep-sea research. Although the alleged water depths of up to 1950 m were by far not reached, these were nevertheless the first soundings in deep bathyal (to perhaps uppermost abyssal) depths. Furthermore, the recovery of a benthic animal proved that animal life existed at great depths. Yet this was not the first published record of deep-sea fauna as it is often portrayed. This merit goes to accidental catches of the stalked crinoid Cenocrinus asterius that were recovered with fishing lines from upper bathyal environments near Antillean islands. In addition, the description of several deep-sea fishes considerably predated the John Ross episode.

  2. Ecological impacts of large-scale disposal of mining waste in the deep sea

    PubMed Central

    Hughes, David J.; Shimmield, Tracy M.; Black, Kenneth D.; Howe, John A.

    2015-01-01

    Deep-Sea Tailings Placement (DSTP) from terrestrial mines is one of several large-scale industrial activities now taking place in the deep sea. The scale and persistence of its impacts on seabed biota are unknown. We sampled around the Lihir and Misima island mines in Papua New Guinea to measure the impacts of ongoing DSTP and assess the state of benthic infaunal communities after its conclusion. At Lihir, where DSTP has operated continuously since 1996, abundance of sediment infauna was substantially reduced across the sampled depth range (800–2020 m), accompanied by changes in higher-taxon community structure, in comparison with unimpacted reference stations. At Misima, where DSTP took place for 15 years, ending in 2004, effects on community composition persisted 3.5 years after its conclusion. Active tailings deposition has severe impacts on deep-sea infaunal communities and these impacts are detectable at a coarse level of taxonomic resolution. PMID:25939397

  3. Lunar rhythms in the deep sea: evidence from the reproductive periodicity of several marine invertebrates.

    PubMed

    Mercier, Annie; Sun, Zhao; Baillon, Sandrine; Hamel, Jean-François

    2011-02-01

    While lunar rhythms are commonly documented in plants and animals living in terrestrial and shallow-water environments, deep-sea organisms have essentially been overlooked in that respect. This report describes evidence of lunar periodicity in the reproduction of 6 deep-sea species belonging to 2 phyla. Occurrences of gamete release in free spawners and larval release in brooders exhibited significant peaks around the new and full moons, respectively. The exact nature of this lunar period (endogenous or exogenous rhythm) and its adaptive significance in the deep sea remain elusive. Current knowledge suggests that proxies of moon phases at depth may include fluxes in particulate matter deposition, cyclic currents, and moonlight for species living in the disphotic zone.

  4. Predicted Deep-Sea Coral Habitat Suitability for the U.S. West Coast

    PubMed Central

    Guinotte, John M.; Davies, Andrew J.

    2014-01-01

    Regional scale habitat suitability models provide finer scale resolution and more focused predictions of where organisms may occur. Previous modelling approaches have focused primarily on local and/or global scales, while regional scale models have been relatively few. In this study, regional scale predictive habitat models are presented for deep-sea corals for the U.S. West Coast (California, Oregon and Washington). Model results are intended to aid in future research or mapping efforts and to assess potential coral habitat suitability both within and outside existing bottom trawl closures (i.e. Essential Fish Habitat (EFH)) and identify suitable habitat within U.S. National Marine Sanctuaries (NMS). Deep-sea coral habitat suitability was modelled at 500 m×500 m spatial resolution using a range of physical, chemical and environmental variables known or thought to influence the distribution of deep-sea corals. Using a spatial partitioning cross-validation approach, maximum entropy models identified slope, temperature, salinity and depth as important predictors for most deep-sea coral taxa. Large areas of highly suitable deep-sea coral habitat were predicted both within and outside of existing bottom trawl closures and NMS boundaries. Predicted habitat suitability over regional scales are not currently able to identify coral areas with pin point accuracy and probably overpredict actual coral distribution due to model limitations and unincorporated variables (i.e. data on distribution of hard substrate) that are known to limit their distribution. Predicted habitat results should be used in conjunction with multibeam bathymetry, geological mapping and other tools to guide future research efforts to areas with the highest probability of harboring deep-sea corals. Field validation of predicted habitat is needed to quantify model accuracy, particularly in areas that have not been sampled. PMID:24759613

  5. Impact of Deepwater Horizon spill on food supply to deep-sea benthos communities

    NASA Astrophysics Data System (ADS)

    Prouty, N. G.; Campbell, P. L.; Mienis, F.; Duineveld, G.; Demopoulos, A. W. J.; Ross, S. W.; Brooke, S.

    2016-02-01

    Deep-sea ecosystems encompass unique and often fragile communities that are sensitive to a variety of anthropogenic and natural impacts. After the 2010 Deepwater Horizon (DWH) oil spill, sampling efforts documented the acute impact of the spill on some deep-sea coral colonies. To investigate the impact of the DWH spill on quality and quantity of biomass delivered to the deep-sea, a suite of geochemical tracers (e.g., stable and radio-isotopes, lipid biomarkers, and compound-specific isotopes) was measured from monthly sediment trap samples deployed near a high-density deep-coral site in the Viosca Knoll area of the north-central Gulf of Mexico prior to (Oct-2008 to Sept-2009) and after the spill (Oct-10 to Sept-11). Marine (e.g., autochthonous) sources of organic matter (OM) dominated the sediment traps in both years, however after the spill, there was a pronounced reduction in marine-sourced OM, including a reduction in marine-sourced sterols and n-alkanes and a concomitant decrease in sediment trap organic carbon and pigment flux. Results from this study indicate a reduction in primary production and carbon export to the deep-sea in 2010-2011, at least 6-18 months after the spill started. Whereas satellite observations indicate an initial increase in phytoplankton biomass, results from this sediment trap study define a reduction in primary production and carbon export to the deep-sea community. In addition, a dilution from a low-14C carbon source (e.g., petro-carbon) was detected in the sediment trap samples after the spill, in conjunction with a change in the petrogenic composition. The data presented here fills a critical gap in our knowledge of biogeochemical processes and sub-acute impacts to the deep-sea that ensued after the 2010 DWH spill.

  6. Unexpected Positive Buoyancy in Deep Sea Sharks, Hexanchus griseus, and a Echinorhinus cookei.

    PubMed

    Nakamura, Itsumi; Meyer, Carl G; Sato, Katsufumi

    2015-01-01

    We do not expect non air-breathing aquatic animals to exhibit positive buoyancy. Sharks, for example, rely on oil-filled livers instead of gas-filled swim bladders to increase their buoyancy, but are nonetheless ubiquitously regarded as either negatively or neutrally buoyant. Deep-sea sharks have particularly large, oil-filled livers, and are believed to be neutrally buoyant in their natural habitat, but this has never been confirmed. To empirically determine the buoyancy status of two species of deep-sea sharks (bluntnose sixgill sharks, Hexanchus griseus, and a prickly shark, Echinorhinus cookei) in their natural habitat, we used accelerometer-magnetometer data loggers to measure their swimming performance. Both species of deep-sea sharks showed similar diel vertical migrations: they swam at depths of 200-300 m at night and deeper than 500 m during the day. Ambient water temperature was around 15°C at 200-300 m but below 7°C at depths greater than 500 m. During vertical movements, all deep-sea sharks showed higher swimming efforts during descent than ascent to maintain a given swimming speed, and were able to glide uphill for extended periods (several minutes), indicating that these deep-sea sharks are in fact positively buoyant in their natural habitats. This positive buoyancy may adaptive for stealthy hunting (i.e. upward gliding to surprise prey from underneath) or may facilitate evening upward migrations when muscle temperatures are coolest, and swimming most sluggish, after spending the day in deep, cold water. Positive buoyancy could potentially be widespread in fish conducting daily vertical migration in deep-sea habitats.

  7. A Dataset of Deep-Sea Fishes Surveyed by Research Vessels in the Waters around Taiwan.

    PubMed

    Shao, Kwang-Tsao; Lin, Jack; Yeh, Hsin-Ming; Lee, Mao-Yin; Chen, Lee-Sea; Lin, Hen-Wei

    2014-01-01

    The study of deep-sea fish fauna is hampered by a lack of data due to the difficulty and high cost incurred in its surveys and collections. Taiwan is situated along the edge of the Eurasia fig, at the junction of three Large Marine Ecosystems or Ecoregions of the East China Sea, South China Sea and the Philippines. As nearly two-thirds of its surrounding marine ecosystems are deep-sea environments, Taiwan is expected to hold a rich diversity of deep-sea fish. However, in the past, no research vessels were employed to collect fish data on site. Only specimens, caught by bottom trawl fishing in the waters hundreds of meters deep and missing precise locality information, were collected from Dasi and Donggang fishing harbors. Began in 2001, with the support of National Science Council, research vessels were made available to take on the task of systematically collecting deep-sea fish specimens and occurrence records in the waters surrounding Taiwan. By the end of 2006, a total of 3,653 specimens, belonging to 26 orders, 88 families, 198 genera and 366 species, were collected in addition to data such as sampling site geographical coordinates and water depth, and fish body length and weight. The information, all accessible from the "Database of Taiwan's Deep-Sea Fauna and Its Distribution (http://deepsea.biodiv.tw/)" as part of the "Fish Database of Taiwan," can benefit the study of temporal and spatial changes in distribution and abundance of fish fauna in the context of global deep-sea biodiversity.

  8. A Dataset of Deep-Sea Fishes Surveyed by Research Vessels in the Waters around Taiwan

    PubMed Central

    Shao, Kwang-Tsao; Lin, Jack; Yeh, Hsin-Ming; Lee, Mao-Yin; Chen, Lee-Sea; Lin, Hen-Wei

    2014-01-01

    Abstract The study of deep-sea fish fauna is hampered by a lack of data due to the difficulty and high cost incurred in its surveys and collections. Taiwan is situated along the edge of the Eurasia fig, at the junction of three Large Marine Ecosystems or Ecoregions of the East China Sea, South China Sea and the Philippines. As nearly two-thirds of its surrounding marine ecosystems are deep-sea environments, Taiwan is expected to hold a rich diversity of deep-sea fish. However, in the past, no research vessels were employed to collect fish data on site. Only specimens, caught by bottom trawl fishing in the waters hundreds of meters deep and missing precise locality information, were collected from Dasi and Donggang fishing harbors. Began in 2001, with the support of National Science Council, research vessels were made available to take on the task of systematically collecting deep-sea fish specimens and occurrence records in the waters surrounding Taiwan. By the end of 2006, a total of 3,653 specimens, belonging to 26 orders, 88 families, 198 genera and 366 species, were collected in addition to data such as sampling site geographical coordinates and water depth, and fish body length and weight. The information, all accessible from the “Database of Taiwan’s Deep-Sea Fauna and Its Distribution (http://deepsea.biodiv.tw/)” as part of the “Fish Database of Taiwan,” can benefit the study of temporal and spatial changes in distribution and abundance of fish fauna in the context of global deep-sea biodiversity. PMID:25610339

  9. Cosmopolitanism and Biogeography of the Genus Manganonema (Nematoda: Monhysterida) in the Deep Sea.

    PubMed

    Zeppilli, Daniela; Vanreusel, Ann; Danovaro, Roberto

    2011-09-05

    Spatial patterns of species diversity provide information about the mechanisms that regulate biodiversity and are important for setting conservation priorities. Present knowledge of the biogeography of meiofauna in the deep sea is scarce. This investigation focuses on the distribution of the deep-sea nematode genus Manganonema, which is typically extremely rare in deep-sea sediment samples. Forty-four specimens of eight different species of this genus were recorded from different Atlantic and Mediterranean regions. Four out of the eight species encountered are new to science. We report here that this genus is widespread both in the Atlantic and in the Mediterranean Sea. These new findings together with literature information indicate that Manganonema is a cosmopolitan genus, inhabiting a variety of deep-sea habitats and oceans. Manganonema shows the highest diversity at water depths >4,000 m. Our data, therefore, indicate that this is preferentially an abyssal genus that is able, at the same time, to colonize specific habitats at depths shallower than 1,000 m. The analysis of the distribution of the genus Manganonema indicates the presence of large differences in dispersal strategies among different species, ranging from locally endemic to cosmopolitan. Lacking meroplanktonic larvae and having limited dispersal ability due to their small size, it has been hypothesized that nematodes have limited dispersal potential. However, the investigated deep-sea nematodes were present across different oceans covering macro-scale distances. Among the possible explanations (hydrological conditions, geographical and geological pathways, long-term processes, specific historical events), their apparent preference of colonizing highly hydrodynamic systems, could suggest that these infaunal organisms are transported by means of deep-sea benthic storms and turbidity currents over long distances.

  10. Impact of Deepwater Horizon Spill on food supply to deep-sea benthos communities

    USGS Publications Warehouse

    Prouty, Nancy G.; Swarzenski, Pamela; Mienis, Furu; Duineveld, Gerald; Demopoulos, Amanda; Ross, Steve W.; Brooke, Sandra

    2016-01-01

    Deep-sea ecosystems encompass unique and often fragile communities that are sensitive to a variety of anthropogenic and natural impacts. After the 2010 Deepwater Horizon (DWH) oil spill, sampling efforts documented the acute impact of the spill on some deep-sea coral colonies. To investigate the impact of the DWH spill on quality and quantity of biomass delivered to the deep-sea, a suite of geochemical tracers (e.g., stable and radio-isotopes, lipid biomarkers, and compound specific isotopes) was measured from monthly sediment trap samples deployed near a high-density deep-coral site in the Viosca Knoll area of the north-central Gulf of Mexico prior to (Oct-2008 to Sept-2009) and after the spill (Oct-10 to Sept-11). Marine (e.g., autochthonous) sources of organic matter dominated the sediment traps in both years, however after the spill, there was a pronounced reduction in marinesourced OM, including a reduction in marine-sourced sterols and n-alkanes and a concomitant decrease in sediment trap organic carbon and pigment flux. Results from this study indicate a reduction in primary production and carbon export to the deep-sea in 2010-2011, at least 6-18 months after the spill started. Whereas satellite observations indicate an initial increase in phytoplankton biomass, results from this sediment trap study define a reduction in primary production and carbon export to the deep-sea community. In addition, a dilution from a low-14C carbon source (e.g., petrocarbon) was detected in the sediment trap samples after the spill, in conjunction with a change in the petrogenic composition. The data presented here fills a critical gap in our knowledge of biogeochemical processes and sub-acute impacts to the deep-sea that ensued after the 2010 DWH spill.

  11. Unexpected Positive Buoyancy in Deep Sea Sharks, Hexanchus griseus, and a Echinorhinus cookei

    PubMed Central

    Nakamura, Itsumi; Meyer, Carl G.; Sato, Katsufumi

    2015-01-01

    We do not expect non air-breathing aquatic animals to exhibit positive buoyancy. Sharks, for example, rely on oil-filled livers instead of gas-filled swim bladders to increase their buoyancy, but are nonetheless ubiquitously regarded as either negatively or neutrally buoyant. Deep-sea sharks have particularly large, oil-filled livers, and are believed to be neutrally buoyant in their natural habitat, but this has never been confirmed. To empirically determine the buoyancy status of two species of deep-sea sharks (bluntnose sixgill sharks, Hexanchus griseus, and a prickly shark, Echinorhinus cookei) in their natural habitat, we used accelerometer-magnetometer data loggers to measure their swimming performance. Both species of deep-sea sharks showed similar diel vertical migrations: they swam at depths of 200–300 m at night and deeper than 500 m during the day. Ambient water temperature was around 15°C at 200–300 m but below 7°C at depths greater than 500 m. During vertical movements, all deep-sea sharks showed higher swimming efforts during descent than ascent to maintain a given swimming speed, and were able to glide uphill for extended periods (several minutes), indicating that these deep-sea sharks are in fact positively buoyant in their natural habitats. This positive buoyancy may adaptive for stealthy hunting (i.e. upward gliding to surprise prey from underneath) or may facilitate evening upward migrations when muscle temperatures are coolest, and swimming most sluggish, after spending the day in deep, cold water. Positive buoyancy could potentially be widespread in fish conducting daily vertical migration in deep-sea habitats. PMID:26061525

  12. Predicted deep-sea coral habitat suitability for the U.S. West coast.

    PubMed

    Guinotte, John M; Davies, Andrew J

    2014-01-01

    Regional scale habitat suitability models provide finer scale resolution and more focused predictions of where organisms may occur. Previous modelling approaches have focused primarily on local and/or global scales, while regional scale models have been relatively few. In this study, regional scale predictive habitat models are presented for deep-sea corals for the U.S. West Coast (California, Oregon and Washington). Model results are intended to aid in future research or mapping efforts and to assess potential coral habitat suitability both within and outside existing bottom trawl closures (i.e. Essential Fish Habitat (EFH)) and identify suitable habitat within U.S. National Marine Sanctuaries (NMS). Deep-sea coral habitat suitability was modelled at 500 m×500 m spatial resolution using a range of physical, chemical and environmental variables known or thought to influence the distribution of deep-sea corals. Using a spatial partitioning cross-validation approach, maximum entropy models identified slope, temperature, salinity and depth as important predictors for most deep-sea coral taxa. Large areas of highly suitable deep-sea coral habitat were predicted both within and outside of existing bottom trawl closures and NMS boundaries. Predicted habitat suitability over regional scales are not currently able to identify coral areas with pin point accuracy and probably overpredict actual coral distribution due to model limitations and unincorporated variables (i.e. data on distribution of hard substrate) that are known to limit their distribution. Predicted habitat results should be used in conjunction with multibeam bathymetry, geological mapping and other tools to guide future research efforts to areas with the highest probability of harboring deep-sea corals. Field validation of predicted habitat is needed to quantify model accuracy, particularly in areas that have not been sampled.

  13. Small-Scale Heterogeneity in Deep-Sea Nematode Communities around Biogenic Structures

    PubMed Central

    Hasemann, Christiane; Soltwedel, Thomas

    2011-01-01

    The unexpected high species richness of deep-sea sediments gives rise to the questions, which processes produce and maintain diversity in the deep sea, and at what spatial scales do these processes operate? The idea of a small-scale habitat structure at the deep-sea floor provides the background for this study. At small scales biogenic structures create a heterogeneous environment that influences the structure of the surrounding communities and the dynamics of the meiobenthic populations. As an example for biogenic structures, small deep-sea sponges (Tentorium semisuberites Schmidt 1870) and their sedimentary environment were investigated for small-scale distribution patterns of benthic deep-sea nematodes. Sampling was carried out with the remotely operated vehicle Victor 6000 at the Arctic deep-sea observatory HAUSGARTEN. In order to investigate nematode community patterns sediment cores around three small sponges and corresponding control cores were analysed. A total of approx. 5800 nematodes were identified. The comparison of the nematode communities from sponge and control samples indicated an influence of the biogenic structure “sponge” on diversity patterns and habitat heterogeneity. The increased number of nematode species and functional groups found in the sediments around the sponges suggest that on a small scale the sponge acts as a gradient and creates a more divers habitat structure. The nematode community from the sponge sediments shows a greater taxonomic variance and species richness together with lower relative abundances of the species compared to those from control sediments. Obviously, the more homogeneous habitat conditions of the control sediments offer less micro-habitats than the sediments around the sponges. This seems to reduce the number of functional groups and species coexisting in the control sediments. PMID:22216193

  14. Introduction to Seamount Special Section

    NASA Astrophysics Data System (ADS)

    Watts, A. B.

    1984-12-01

    This special section is the outcome of a symposium held at the Lamont-Doherty Geological Observatory November 17-19, 1982, on the origin and evolution of seamounts. The topic for the symposium arose from the realization that although there is now a wealth of new ideas on the geology, geophysics, and geochemistry of the ocean floor, the study of seamounts has been relatively neglected despite their great importance to plate tectonics. One of the most interesting features of the ocean floor is the large number of small volcanoes or seamounts. Usually, these features are circular in plan view and have a sharp summit. There has been extensive debate in the literature about the significance of the different morphological types of seamounts. A traditional view has been that flattopped seamounts (e.g., guyots) formed as a result of subaerial erosion when the volcanoes were above sea level. Seamounts covered by fringing reefs or sediments (e.g., atolls), on the other hand, are believed to have formed when the original volcanic foundation subsided below sea level.

  15. NOAA's efforts to map extent, health and condition of deep sea corals and sponges and their habitat on the banks and island slopes of Southern California

    NASA Astrophysics Data System (ADS)

    Etnoyer, P. J.; Salgado, E.; Stierhoff, K.; Wickes, L.; Nehasil, S.; Kracker, L.; Lauermann, A.; Rosen, D.; Caldow, C.

    2015-12-01

    Southern California's deep-sea corals are diverse and abundant, but subject to multiple stressors, including corallivory, ocean acidification, and commercial bottom fishing. NOAA has surveyed these habitats using a remotely operated vehicle (ROV) since 2003. The ROV was equipped with high-resolution cameras to document deep-water groundfish and their habitat in a series of research expeditions from 2003 - 2011. Recent surveys 2011-2015 focused on in-situ measures of aragonite saturation and habitat mapping in notable habitats identified in previous years. Surveys mapped abundance and diversity of fishes and corals, as well as commercial fisheries landings and frequency of fishing gear. A novel priority setting algorithm was developed to identify hotspots of diversity and fishing intensity, and to determine where future conservation efforts may be warranted. High density coral aggregations identified in these analyses were also used to guide recent multibeam mapping efforts. The maps suggest a large extent of unexplored and unprotected hard-bottom habitat in the mesophotic zone and deep-sea reaches of Channel Islands National Marine Sanctuary.

  16. Another bipolar deep-sea anemone: new species of Iosactis (Actiniaria, Endomyaria) from Antarctica

    NASA Astrophysics Data System (ADS)

    Rodríguez, Estefanía

    2012-06-01

    A new species of deep-sea burrowing sea anemone is described and illustrated from Antarctica. Iosactis antarctica sp. nov. is characterised by easily deciduous tentacles with sphincters in the base, smooth column, endodermal marginal sphincter, same mesenteries proximally and distally, 24 perfect mesenteries regularly arranged, diffuse retractor musculature and basilar muscles well developed. Iosactis antarctica sp. nov. is the second species of the deep-sea abyssal genus Iosactis; it differs from I. vagabunda in internal anatomy, cnidae and geographic distribution. The description of I. antarctica sp. nov. provides the opportunity to revaluate the morphology of the proximal end of this genus.

  17. Size distribution of interplanetary iron and stony particles related with deep-sea spherules

    NASA Technical Reports Server (NTRS)

    Matsuzaki, H.; Yamakoshi, K.

    1993-01-01

    To study origin and evolution of the interplanetary dust, it is very important to investigate the size distribution. Here the changes of the size distributions of meteoroid particles due to the ablative effects during atmospheric entry were investigated by numerical computer simulation. Using the results, the pre-atmospheric size distributions of the interplanetary dust particles could be estimated from that of ablated spherules taken from deep-sea sediments. We are now analyzing deep-sea spherules from some aspects and examining if we could get any information about the interplanetary dust.

  18. Thermodynamic and functional characteristics of deep-sea enzymes revealed by pressure effects.

    PubMed

    Ohmae, Eiji; Miyashita, Yurina; Kato, Chiaki

    2013-09-01

    Hydrostatic pressure analysis is an ideal approach for studying protein dynamics and hydration. The development of full ocean depth submersibles and high pressure biological techniques allows us to investigate enzymes from deep-sea organisms at the molecular level. The aim of this review was to overview the thermodynamic and functional characteristics of deep-sea enzymes as revealed by pressure axis analysis after giving a brief introduction to the thermodynamic principles underlying the effects of pressure on the structural stability and function of enzymes.

  19. Demersal Fish Assemblages on Seamounts and Other Rugged Features in Deep Waters of the Greater and Lesser Antilles

    NASA Astrophysics Data System (ADS)

    Chaytor, J. D.; Quattrini, A.; Demopoulos, A. W.

    2015-12-01

    Caribbean fish communities in shallow waters have been well studied along the Greater and Lesser Antilles for decades; however, the deep (>200 m) assemblages remain poorly known due to the technical challenges associated with focused surveys at these greater depths. The numerous geological features (e.g., seamounts, island ridges, banks) that punctuate the insular margins increase habitat heterogeneity, which may lead to enhanced diversity of the deep demersal fish community in the region. Recent (2013-2014) expeditions in the area using the E/V Nautilus and the ROV Hercules surveyed fish communities during 17 dives across different seafloor features at depths ranging from 64 to 2944 m. These surveys enabled us to investigate whether demersal fish assemblages differed among these seafloor features and/or in response to other environmental factors. Preliminary analyses suggested that assemblage differences are influenced by depth, dissolved oxygen, and differences in benthic microhabitat (i.e., soft substrate, rock outcrop, slope angle). Notably, both abundance and diversity of fishes was low at depths >700 m on seamounts in the Anegada Passage. This pattern is likely due to limited food supply in the region. ROV surveys further elucidated the biogeography of numerous species, as several range and depth extensions were documented. For instance, the morid Lepidion sp., previously known only from the eastern Atlantic and the western North Atlantic, was documented on Norrôit Seamount. A new species, Polylepion sp. A, known only from Curacao, was documented on Conrad Seamount. Also, many common, mesophotic reef species were observed deeper than previously known, including the butterflyfishes Chaetodon sedentarius and Prognathodes aculeatus. This study further supports the importance of environmental conditions influencing local-scale distribution of deep-sea fishes, while demonstrating how little is still known about the biogeography of numerous deep-sea and mesophotic

  20. Diffusive transfer of oxygen from seamount basaltic crust into overlying sediments: An example from the Clarion-Clipperton Fracture Zone

    NASA Astrophysics Data System (ADS)

    Mewes, K.; Mogollón, J. M.; Picard, A.; Rühlemann, C.; Eisenhauer, A.; Kuhn, T.; Ziebis, W.; Kasten, S.

    2016-01-01

    The Clarion-Clipperton Fracture Zone (CCFZ) in the Pacific Ocean is characterized by organic carbon-starved sediments and meter-scale oxygen penetration into the sediment. Furthermore, numerous seamounts occur throughout its deep-sea plain, which may serve as conduits for low-temperature hydrothermal seawater circulation through the oceanic crust. Recent studies in deep-sea environments of the Pacific and Atlantic Oceans have suggested and presented evidence of dissolved constituent exchange between the seawater flowing in the basaltic crust and the pore water of the overlying sediments. Through high-resolution pore-water oxygen and nutrient measurements, we examined fluxes and geochemical interactions between the seamount basaltic basement and pore waters of the overlying sediments at three sites located on a radial transect from the foot of Teddy Bare, a small seamount in the CCFZ. At three sites, located 1000, 700 and 400 m away from the foot of the seamount, we found that oxygen concentrations initially decrease with sediment depth but start to increase at depths of 3 and 7 m toward the basaltic basement. Nitrate (NO3-) concentrations mirror the oxygen concentration profiles, as they increase with sediment depth but decrease towards the basement. These profiles suggest an upward diffusion of oxygen from seawater circulating within the seamount crust into the overlying basal sediments and a downward diffusion of NO32- from sediment pore water into the basaltic crust. At one site, we determined that the 87Sr/86Sr ratios of the bottom water and of the deep sediment near the basaltic crust are similar, further supporting diffusive exchange between basaltic crust fluids and sediment pore water. Transport-reaction modeling performed at two of the study sites revealed that (1) the diffusive flux of oxygen from the basaltic basement outpaces the oxygen consumption through organic matter oxidation and nitrification in the basal sediments and (2) the nutrient exchange

  1. 76 FR 39369 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fishery; Amendment 3

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-07-06

    ... proposed measure to remove the prohibition on landing more than one standard tote of female red crabs... effectively enforce these regulations. 8. Remove Prohibition on Landing Female Red Crab The Council has also... (45.4 kg)) of female red crab, conditional on a scientific recommendation from the SSC. The...

  2. 75 FR 35435 - Fisheries of the Northeastern United States; Atlantic Deep-Sea Red Crab Fisheries; 2010 Atlantic...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-06-22

    ... catch (TAC) and a fleet-wide days-at-sea (DAS) allocation. However, the implementing regulations for the... rulemaking is to adjust the target TAC and corresponding fleet DAS allocation equivalent to the revised... crab emergency action implemented by NMFS (74 FR 9770, March 6, 2009), i.e., a target TAC of...

  3. Resolving Seamounts in Satellite Altimetry

    NASA Astrophysics Data System (ADS)

    Marks, K. M.; Smith, W. H.

    2006-12-01

    We have examined three factors influencing the use of satellite altimeter data to map seamounts and guyots in the deep ocean: (1) the resolution of seamount and guyot gravity anomalies by altimetry; (2) the non-linearity of the relationship between gravity and bathymetry; and (3) the homogeneity of the mass density within the seamount or guyot. When altimeter data are used to model the marine gravity anomaly field the result may have limited resolution due to noise levels in the altimeter data, track spacing of the satellite profiles, inclination angles of the orbits, and filters used to combine and interpolate the data (Sandwell and Smith, JGR, 1997). We compared the peak-to-trough amplitude of gravity anomalies in Sandwell and Smith`'s version 15.1 field to peak-to-trough amplitudes measured by gravimeters on board ships. The satellite gravity field amplitudes match ship measurements well over seamounts and guyots having volumes exceeding ~2000 km3. Over smaller volume seamounts, where the anomalies have most of their power at quite short wavelengths, the satellite field under-estimates the anomaly amplitude. If less filtering could be done, or a new mission with a lower noise level were flown, more of the anomalies associated with small seamounts might be resolved. Smith and Sandwell (Science, 1997) predicted seafloor topography from altimetric gravity assuming that the density of seafloor topography is nearly constant over ~100 km distances, and that the relationship between gravity and topography may be approximated by a liner filter over those distances. In fact, the true theoretical relationship is non-linear (Parker, Geophys. J. R. astr. Soc, 1972); it can be expressed as an N-th order expansion, with the N=1 term representing a linear filter and the N>1 terms accounting for higher-order corrections. We find that N=2 is a sufficient approximation at both seamounts and guyots. Constant density models of large volume guyots do not fit the observed gravity

  4. Geochemistry of hydrothermal plume in the Suiyo Seamount Caldera.

    NASA Astrophysics Data System (ADS)

    Shitashima, K.; Maeda, Y.

    2002-12-01

    Chemical compounds of the hot basalt origin are discharged into the deep ocean via hydrothermal plume by the deep-sea hydrothermal activity. The hydrothermal plume is widely diffused to the ocean by mixing with ambient seawater. Chemical reactions and interactions with microorganisms in the diffusion process of the hydrothermal plume are important to comprehend the oceanic geochemical cycles. Recently, it has been clarified that the variation of hydrothermal activity is greatly controlled in the tidal current. Not only geochemical observation but also physical observation, such as water current measurement, are necessary for the understanding of the deep-sea hydrothermal systems including the behavior of hydrothermal plume. In order to observe the diffusion process of hydrothermal plumes, sampling and chemical mapping of the hydrothermal plume and measurement of water current were carried out at the Suiyo Seamount Caldera during research cruises under the ?Archaean Park? project funded by MEXT. The three-dimensional acoustic current meters were moored at the height of 13m and 125m above the bottom in the Suiyo Seamount Caldera. At the 13m height, average water current speed and current direction were 10.46 cm/second and 228.1 degrees, respectively, and maximum water current speed was over 40.46 cm/second. On the other hand, average water current speed and current direction at the 125m height were 3.87 cm/second and 57.8 degrees, respectively. The strong water current of the southwest direction in 24 hours periods existed near bottom of the caldera. In addition, downward current and water temperature depreciation were observed, when there was the strong current in 24 hours periods. These results suggest that the low-temperature ocean water around the Suiyo Seamount flows toward the bottom of caldera periodically. The mini CTDT-RMS mounted twelve 1.2L Niskin bottles and the in-situ pH sensor were installed on the ROV or manned submersible. The hydrothermal plume

  5. Some observations on the biology of two rarely seen deep-sea chimaerids, Chimaera carophila and Hydrolagus homonycteris.

    PubMed

    Finucci, B; Stevens, D W; Jones, E G; Dunn, M R

    2017-03-07

    Chimaera carophila (n = 45) and Hydrolagus homonycteris (n = 11), two deep-sea chimaerids rarely caught in the waters off New Zealand, were collected from research trawl catches and commercial fishery catches around New Zealand at depths between 400 and 1300 m, between 2014 and 2016. Additional preserved specimens of both species (n = 58) from museum collections were analysed for size, sex and maturity. External assessment of male claspers and a combination of internal assessments of female gonad mass and oviducal gland width, were used to determine maturity. For both species, length at first maturity was 0·70-0·82 of their maximum observed chimaera length (LC ), with females maturing at a larger size. Length at maturity for C. carophila (LC range: 28·7-103·9 cm) was estimated at 72·5 cm LC for males (n = 163) and 82·5 LC for females (n = 58). In H. homonycteris, length at maturity (length range: 78·6-99·8 cm LC ) was estimated at 79·1 cm LC for males (n = 51) and 80·1 cm LC for females (n = 17). Ovarian fecundity was up to 31 for C. carophila and sperm storage was confirmed in the oviducal gland of this species. Both species preyed on benthic invertebrates. Some C. carophila and H. homonycteris inhabit depths beyond most current fisheries, but both species appear to be relatively rare and have reproductive parameters characteristic of low productivity, which may make these species vulnerable to population decline if mortality was to increase in the future.

  6. Exploring fungal diversity in deep-sea sediments from Okinawa Trough using high-throughput Illumina sequencing

    NASA Astrophysics Data System (ADS)

    Zhang, Xiao-Yong; Wang, Guang-Hua; Xu, Xin-Ya; Nong, Xu-Hua; Wang, Jie; Amin, Muhammad; Qi, Shu-Hua

    2016-10-01

    The present study investigated the fungal diversity in four different deep-sea sediments from Okinawa Trough using high-throughput Illumina sequencing of the nuclear ribosomal internal transcribed spacer-1 (ITS1). A total of 40,297 fungal ITS1 sequences clustered into 420 operational taxonomic units (OTUs) with 97% sequence similarity and 170 taxa were recovered from these sediments. Most ITS1 sequences (78%) belonged to the phylum Ascomycota, followed by Basidiomycota (17.3%), Zygomycota (1.5%) and Chytridiomycota (0.8%), and a small proportion (2.4%) belonged to unassigned fungal phyla. Compared with previous studies on fungal diversity of sediments from deep-sea environments by culture-dependent approach and clone library analysis, the present result suggested that Illumina sequencing had been dramatically accelerating the discovery of fungal community of deep-sea sediments. Furthermore, our results revealed that Sordariomycetes was the most diverse and abundant fungal class in this study, challenging the traditional view that the diversity of Sordariomycetes phylotypes was low in the deep-sea environments. In addition, more than 12 taxa accounted for 21.5% sequences were found to be rarely reported as deep-sea fungi, suggesting the deep-sea sediments from Okinawa Trough harbored a plethora of different fungal communities compared with other deep-sea environments. To our knowledge, this study is the first exploration of the fungal diversity in deep-sea sediments from Okinawa Trough using high-throughput Illumina sequencing.

  7. Genome Sequence of the Deep-Sea Denitrifier Pseudomonas sp. Strain MT-1, Isolated from the Mariana Trench.

    PubMed

    Fujinami, Shun; Oikawa, Yuji; Araki, Takuma; Shinmura, Yui; Midorikawa, Ryota; Ishizaka, Hikari; Kato, Chiaki; Horikoshi, Koki; Ito, Masahiro; Tamegai, Hideyuki

    2014-12-18

    Pseudomonas sp. strain MT-1 was the first deep-sea denitrifier isolated and characterized from mud recovered from a depth of 11,000 m in the Mariana Trench. We report here the genome sequence of this bacterium, which contributes to our understanding of denitrification and bioenergetics in the deep sea.

  8. From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria

    PubMed Central

    Pérez-Rodríguez, Ileana; Bolognini, Marie; Ricci, Jessica; Bini, Elisabetta; Vetriani, Costantino

    2015-01-01

    Chemosynthetic Epsilonproteobacteria from deep-sea hydrothermal vents colonize substrates exposed to steep thermal and redox gradients. In many bacteria, substrate attachment, biofilm formation, expression of virulence genes and host colonization are partly controlled via a cell density-dependent mechanism involving signal molecules, known as quorum sensing. Within the Epsilonproteobacteria, quorum sensing has been investigated only in human pathogens that use the luxS/autoinducer-2 (AI-2) mechanism to control the expression of some of these functions. In this study we showed that luxS is conserved in Epsilonproteobacteria and that pathogenic and mesophilic members of this class inherited this gene from a thermophilic ancestor. Furthermore, we provide evidence that the luxS gene is expressed—and a quorum-sensing signal is produced—during growth of Sulfurovum lithotrophicum and Caminibacter mediatlanticus, two Epsilonproteobacteria from deep-sea hydrothermal vents. Finally, we detected luxS transcripts in Epsilonproteobacteria-dominated biofilm communities collected from deep-sea hydrothermal vents. Taken together, our findings indicate that the epsiloproteobacterial lineage of the LuxS enzyme originated in high-temperature geothermal environments and that, in vent Epsilonproteobacteria, luxS expression is linked to the production of AI-2 signals, which are likely produced in situ at deep-sea vents. We conclude that the luxS gene is part of the ancestral epsilonproteobacterial genome and represents an evolutionary link that connects thermophiles to human pathogens. PMID:25397946

  9. Ancient DNA complements microfossil record in deep-sea subsurface sediments.

    PubMed

    Lejzerowicz, Franck; Esling, Philippe; Majewski, Wojciech; Szczuciński, Witold; Decelle, Johan; Obadia, Cyril; Arbizu, Pedro Martinez; Pawlowski, Jan

    2013-08-23

    Deep-sea subsurface sediments are the most important archives of marine biodiversity. Until now, these archives were studied mainly using the microfossil record, disregarding large amounts of DNA accumulated on the deep-sea floor. Accessing ancient DNA (aDNA) molecules preserved down-core would offer unique insights into the history of marine biodiversity, including both fossilized and non-fossilized taxa. Here, we recover aDNA of eukaryotic origin across four cores collected at abyssal depths in the South Atlantic, in up to 32.5 thousand-year-old sediment layers. Our study focuses on Foraminifera and Radiolaria, two major groups of marine microfossils also comprising diverse non-fossilized taxa. We describe their assemblages in down-core sediment layers applying both micropalaeontological and environmental DNA sequencing approaches. Short fragments of the foraminiferal and radiolarian small subunit rRNA gene recovered from sedimentary DNA extracts provide evidence that eukaryotic aDNA is preserved in deep-sea sediments encompassing the last glacial maximum. Most aDNA were assigned to non-fossilized taxa that also dominate in molecular studies of modern environments. Our study reveals the potential of aDNA to better document the evolution of past marine ecosystems and opens new horizons for the development of deep-sea palaeogenomics.

  10. Disturbance of deep-sea environments induced by the M9.0 Tohoku Earthquake

    PubMed Central

    Kawagucci, Shinsuke; Yoshida, Yukari T.; Noguchi, Takuroh; Honda, Makio C.; Uchida, Hiroshi; Ishibashi, Hidenori; Nakagawa, Fumiko; Tsunogai, Urumu; Okamura, Kei; Takaki, Yoshihiro; Nunoura, Takuro; Miyazaki, Junichi; Hirai, Miho; Lin, Weiren; Kitazato, Hiroshi; Takai, Ken

    2012-01-01

    The impacts of the M9.0 Tohoku Earthquake on deep-sea environment were investigated 36 and 98 days after the event. The light transmission anomaly in the deep-sea water after 36 days became atypically greater (∼35%) and more extensive (thickness ∼1500 m) near the trench axis owing to the turbulent diffusion of fresh seafloor sediment, coordinated with potential seafloor displacement. In addition to the chemical influx associated with sediment diffusion, an influx of 13C-enriched methane from the deep sub-seafloor reservoirs was estimated. This isotopically unusual methane influx was possibly triggered by the earthquake and its aftershocks that subsequently induced changes in the sub-seafloor hydrogeologic structures. The whole prokaryotic biomass and the development of specific phylotypes in the deep-sea microbial communities could rise and fall at 36 and 98 days, respectively, after the event. We may capture the snap shots of post-earthquake disturbance in deep-sea chemistry and microbial community responses. PMID:22355782

  11. Temporal dynamics of deep-sea latitudinal species diversity gradient based on paleoceanographic/micropaleontologic data

    NASA Astrophysics Data System (ADS)

    Yasuhara, M.; Hunt, G.; Okahashi, H.

    2009-12-01

    Macroecology investigates large-scale ecological phenomena, such as regional-global trends in ecosystem properties and biodiversity, and is used to better understand recent human-induced ecosystem degradation. Paleoceanography investigates physical/chemical parameters, biogeochemical cycles, ocean circulation, and ocean-atmosphere interaction, but rarely includes ecosystem-scale biological processes. Here we adopt a macroecological approach to paleoceanography and present sediment core records of the temporal dynamics of deep-sea species diversity gradients using ostracodes from the equatorial Atlantic Ocean for the past four glacial-interglacial cycles. Results show unexpected instability and high amplitude fluctuations in species diversity in the tropical deep ocean. The results imply that the modern deep-sea latitudinal species diversity gradient is unexpectedly dynamic over short time intervals and collapsed during glacial periods. Unstable tropical diversity requires reconsideration of current ecological hypotheses about the generation and maintenance of biodiversity as they apply to the deep sea, and underscores the potential vulnerability and conservation importance of tropical deep-sea ecosystems.

  12. Impacts on the deep-sea ecosystem by a severe coastal storm.

    PubMed

    Sanchez-Vidal, Anna; Canals, Miquel; Calafat, Antoni M; Lastras, Galderic; Pedrosa-Pàmies, Rut; Menéndez, Melisa; Medina, Raúl; Company, Joan B; Hereu, Bernat; Romero, Javier; Alcoverro, Teresa

    2012-01-01

    Major coastal storms, associated with strong winds, high waves and intensified currents, and occasionally with heavy rains and flash floods, are mostly known because of the serious damage they can cause along the shoreline and the threats they pose to navigation. However, there is a profound lack of knowledge on the deep-sea impacts of severe coastal storms. Concurrent measurements of key parameters along the coast and in the deep-sea are extremely rare. Here we present a unique data set showing how one of the most extreme coastal storms of the last decades lashing the Western Mediterranean Sea rapidly impacted the deep-sea ecosystem. The storm peaked the 26(th) of December 2008 leading to the remobilization of a shallow-water reservoir of marine organic carbon associated with fine particles and resulting in its redistribution across the deep basin. The storm also initiated the movement of large amounts of coarse shelf sediment, which abraded and buried benthic communities. Our findings demonstrate, first, that severe coastal storms are highly efficient in transporting organic carbon from shallow water to deep water, thus contributing to its sequestration and, second, that natural, intermittent atmospheric drivers sensitive to global climate change have the potential to tremendously impact the largest and least known ecosystem on Earth, the deep-sea ecosystem.

  13. Southern Ocean deep-sea biodiversity—From patterns to processes

    NASA Astrophysics Data System (ADS)

    Brandt, Angelika; Ebbe, Brigitte

    2009-09-01

    The Southern Ocean is characterized by a narrow and deep shelf, an almost isothermal water column and a large area of deep sea surrounding Antarctica. However, knowledge of the deep-sea faunal composition, particularly in the Southern Ocean, is still scarce in comparison with shelf and upper slope environment. For that reason a deep-sea project was devoted to investigate this little-known area of the Southern Ocean. ANDEEP (ANtarctic benthic DEEP-sea biodiversity: colonisation history and recent community patterns) took place in 2002-2005 and provided first insights into the biodiversity and biogeography of Southern Ocean benthic animals from meio- to megafauna. The results with the very general patterns are outlined here. Based on the knowledge on biodiversity patterns gained through ANDEEP, a follow-up project, ANDEEP-SYSTCO (SYSTem COupling), was established in the international polar year in order to investigate the processes driving the biodiversity pattern observed. This expedition took place in 2007/2008 and only preliminary data can be presented at this stage given that the material was available for only a couple of months since the return of R.V. Polarstern. Some key results identified after the SYSTCO expedition are presented.

  14. Microbial diversity and adaptation to high hydrostatic pressure in deep-sea hydrothermal vents prokaryotes.

    PubMed

    Jebbar, Mohamed; Franzetti, Bruno; Girard, Eric; Oger, Philippe

    2015-07-01

    Prokaryotes inhabiting in the deep sea vent ecosystem will thus experience harsh conditions of temperature, pH, salinity or high hydrostatic pressure (HHP) stress. Among the fifty-two piezophilic and piezotolerant prokaryotes isolated so far from different deep-sea environments, only fifteen (four Bacteria and eleven Archaea) that are true hyper/thermophiles and piezophiles have been isolated from deep-sea hydrothermal vents; these belong mainly to the Thermococcales order. Different strategies are used by microorganisms to thrive in deep-sea hydrothermal vents in which "extreme" physico-chemical conditions prevail and where non-adapted organisms cannot live, or even survive. HHP is known to impact the structure of several cellular components and functions, such as membrane fluidity, protein activity and structure. Physically the impact of pressure resembles a lowering of temperature, since it reinforces the structure of certain molecules, such as membrane lipids, and an increase in temperature, since it will also destabilize other structures, such as proteins. However, universal molecular signatures of HHP adaptation are not yet known and are still to be deciphered.

  15. Characterization of Bacterial Communities in Deep-Sea Hydrothermal Vents from Three Oceanic Regions.

    PubMed

    He, Tianliang; Zhang, Xiaobo

    2016-04-01

    Deep-sea hydrothermal vents are considered to be one of the most spectacular ecosystems on Earth. Microorganisms form the basis of the food chain in vents controlling the vent communities. However, the diversity of bacterial communities in deep-sea hydrothermal vents from different oceans remains largely unknown. In this study, the pyrosequencing of 16S rRNA gene was used to characterize the bacterial communities of the venting sulfide, seawater, and tubeworm trophosome from East Pacific Rise, South Atlantic Ridge, and Southwest Indian Ridge, respectively. A total of 23,767 operational taxonomic units (OTUs) were assigned into 42 different phyla. Although Proteobacteria, Actinobacteria, and Bacteroidetes were the predominant phyla in all vents, differences of bacterial diversity were observed among different vents from three oceanic regions. The sulfides of East Pacific Rise possessed the most diverse bacterial communities. The bacterial diversities of venting seawater were much lower than those of vent sulfides. The symbiotic bacteria of tubeworm Ridgeia piscesae were included in the bacterial community of vent sulfides, suggesting their significant ecological functions as the primary producers in the deep-sea hydrothermal vent ecosystems. Therefore, our study presented a comprehensive view of bacterial communities in deep-sea hydrothermal vents from different oceans.

  16. Biogeography of Persephonella in deep-sea hydrothermal vents of the Western Pacific.

    PubMed

    Mino, Sayaka; Makita, Hiroko; Toki, Tomohiro; Miyazaki, Junichi; Kato, Shingo; Watanabe, Hiromi; Imachi, Hiroyuki; Watsuji, Tomo-O; Nunoura, Takuro; Kojima, Shigeaki; Sawabe, Tomoo; Takai, Ken; Nakagawa, Satoshi

    2013-01-01

    Deep-sea hydrothermal vent fields are areas on the seafloor with high biological productivity fueled by microbial chemosynthesis. Members of the Aquificales genus Persephonella are obligately chemosynthetic bacteria, and appear to be key players in carbon, sulfur, and nitrogen cycles in high temperature habitats at deep-sea vents. Although this group of bacteria has cosmopolitan distribution in deep-sea hydrothermal ecosystem around the world, little is known about their population structure such as intraspecific genomic diversity, distribution pattern, and phenotypic diversity. We developed the multi-locus sequence analysis (MLSA) scheme for their genomic characterization. Sequence variation was determined in five housekeeping genes and one functional gene of 36 Persephonella hydrogeniphila strains originated from the Okinawa Trough and the South Mariana Trough (SNT). Although the strains share >98.7% similarities in 16S rRNA gene sequences, MLSA revealed 35 different sequence types (ST), indicating their extensive genomic diversity. A phylogenetic tree inferred from all concatenated gene sequences revealed the clustering of isolates according to the geographic origin. In addition, the phenotypic clustering pattern inferred from whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF/MS) analysis can be correlated to their MLSA clustering pattern. This study represents the first MLSA combined with phenotypic analysis indicative of allopatric speciation of deep-sea hydrothermal vent bacteria.

  17. Trophic dynamics of deep-sea megabenthos are mediated by surface productivity.

    PubMed

    Tecchio, Samuele; van Oevelen, Dick; Soetaert, Karline; Navarro, Joan; Ramírez-Llodra, Eva

    2013-01-01

    Most deep-sea benthic ecosystems are food limited and, in the majority of cases, are driven by the organic matter falling from the surface or advected downslope. Species may adapt to this scarceness by applying a wide variety of responses, such as feeding specialisation, niche width variation, and reduction in metabolic rates. The Mediterranean Sea hosts a gradient of food availability at the deep seafloor over its wide longitudinal transect. In the Mediterranean, broad regional studies on trophic habits are almost absent, and the response of deep-sea benthos to different trophic conditions is still speculative. Here, we show that both primary and secondary production processes taking place at surface layers are key drivers of deep-sea food web structuring. By employing an innovative statistical tool, we interpreted bulk-tissue δ(13)C and δ(15)N isotope ratios in benthic megafauna, and associated surface and mesopelagic components from the 3 basins of the Mediterranean Sea at 3 different depths (1200, 2000, and 3000 m). The trophic niche width and the amplitude of primary carbon sources were positively correlated with both primary and secondary surface production indicators. Moreover, mesopelagic organic matter utilization processes showed an intermediate position between surface and deep benthic components. These results shed light on the understanding of deep-sea ecosystems functioning and, at the same time, they demand further investigation.

  18. Deep-sea environment and biodiversity of the West African Equatorial margin

    NASA Astrophysics Data System (ADS)

    Sibuet, Myriam; Vangriesheim, Annick

    2009-12-01

    The long-term BIOZAIRE multidisciplinary deep-sea environmental program on the West Equatorial African margin organized in partnership between Ifremer and TOTAL aimed at characterizing the benthic community structure in relation with physical and chemical processes in a region of oil and gas interest. The morphology of the deep Congo submarine channel and the sedimentological structures of the deep-sea fan were established during the geological ZAIANGO project and helped to select study sites ranging from 350 to 4800 m water depth inside or near the channel and away from its influence. Ifremer conducted eight deep-sea cruises on board research vessels between 2000 and 2005. Standardized methods of sampling together with new technologies such as the ROV Victor 6000 and its associated instrumentation were used to investigate this poorly known continental margin. In addition to the study of sedimentary environments more or less influenced by turbidity events, the discovery of one of the largest cold seeps near the Congo channel and deep coral reefs extends our knowledge of the different habitats of this margin. This paper presents the background, objectives and major results of the BIOZAIRE Program. It highlights the work achieved in the 16 papers in this special issue. This synthesis paper describes the knowledge acquired at a regional and local scale of the Equatorial East Atlantic margin, and tackles new interdisciplinary questions to be answered in the various domains of physics, chemistry, taxonomy and ecology to better understand the deep-sea environment in the Gulf of Guinea.

  19. Deep-sea food web analysis using cross-reacting antisera

    NASA Astrophysics Data System (ADS)

    Feller, Robert J.; Zagursky, Gregory; Day, Elizabeth A.

    1985-04-01

    The high incidence of unrecognizable prey in the stomachs of deep-sea predators prompted the application of serological methods for identification of trophic connections. Antisera to whole-organism extracts of estuarine taxa cross-reacted with antigenic protein extracts of mid-water and deep-sea taxa along phylogenetically correct lines, indicating their potential as tools for gut contents immunoassay. Stomach, intestine, and rectum contents of grenadiers ( Coryphaenoides armatus) trapped at 2500 m in the North Atlantic were analyzed visually and with 32 antisera representing taxa from 10 common deep-sea phyla. While visual analysis only revealed the presence of fluids, parasites, crustacean exoskeletons, and gastropod opercula, the immunoassay indicated the presence of antigenic proteins from holothurian, anemone, gastropod, decapod, and foraminiferan prey in the same samples. This qualitative serological identification of prey at non-specific taxonomic levels provides evidence that benthic predation may be important within deep-sea communities. The immunoassay technique, although not a panacea for elucidating food web dynamics in remote environments, may be useful when other methods fail to identify trophic pathways.

  20. Diverse deep-sea fungi from the South China Sea and their antimicrobial activity.

    PubMed

    Zhang, Xiao-Yong; Zhang, Yun; Xu, Xin-Ya; Qi, Shu-Hua

    2013-11-01

    We investigated the diversity of fungal communities in nine different deep-sea sediment samples of the South China Sea by culture-dependent methods followed by analysis of fungal internal transcribed spacer (ITS) sequences. Although 14 out of 27 identified species were reported in a previous study, 13 species were isolated from sediments of deep-sea environments for the first report. Moreover, these ITS sequences of six isolates shared 84-92 % similarity with their closest matches in GenBank, which suggested that they might be novel phylotypes of genera Ajellomyces, Podosordaria, Torula, and Xylaria. The antimicrobial activities of these fungal isolates were explored using a double-layer technique. A relatively high proportion (56 %) of fungal isolates exhibited antimicrobial activity against at least one pathogenic bacterium or fungus among four marine pathogenic microbes (Micrococcus luteus, Pseudoaltermonas piscida, Aspergerillus versicolor, and A. sydowii). Out of these antimicrobial fungi, the genera Arthrinium, Aspergillus, and Penicillium exhibited antibacterial and antifungal activities, while genus Aureobasidium displayed only antibacterial activity, and genera Acremonium, Cladosporium, Geomyces, and Phaeosphaeriopsis displayed only antifungal activity. To our knowledge, this is the first report to investigate the diversity and antimicrobial activity of culturable deep-sea-derived fungi in the South China Sea. These results suggest that diverse deep-sea fungi from the South China Sea are a potential source for antibiotics' discovery and further increase the pool of fungi available for natural bioactive product screening.

  1. Ichnology of pelagic carbonate in New Zealand and Denmark: Shelf Sea or Deep Sea

    SciTech Connect

    Ekdale, A.A. )

    1990-05-01

    Today, pelagic carbonate ooze is an exclusive feature of deep-sea environments 1 km or more in depth. In contrast, the extensive epicratonic seas that characterized the Late Cretaceous and early Tertiary received great thicknesses of pelagic carbonate sediment in environments only a few hundred meters deep. Distinguishing between deep-sea and shelf-sea carbonate is not an easy task, but ichnologic investigation helps. Biogenic sedimentary structures, ichnofacies, and ichnofabrics in Cretaceous-Tertiary epicratonic pelagic deposits display many similarities to those in deep-sea sediment. Ichnologic features in shelf-sea chalk and limestone in both New Zealand and northern Europe reveal some interesting paleobathymetric trends. These trends include a general decrease in crustacean traces (Thalassinoides, etc.) and bioerosion traces (Trypanites, etc.) with increasing water depth, accompanied by a concomitant increase in worm burrows (Zoophycos, etc.). Maastrichtian-Oligocene pelaic limestone in New Zealand and Maastrichtian-Paleocene chalk in Denmark neither of which represent a truly deep-sea setting, exhibit similar ichnofacies and ichnofabrics. Some notable differences exist because the New Zealand platform was less extensive and more tectonically active than the northern European shelf. Pelagic strata in New Zealand are associated with shallow-water quartzose sandstone beneath and fossiliferous calcarenite above, as well as deep-water bedded chert within, the pelagic carbonate sequence. In New Zealand strata Zoophycos-rich facies dominate Thalassinoides-rich facies, and bored hardgrounds are uncommon; in Danish chalk sequences the opposite is true in both cases.

  2. Biogeography of Persephonella in deep-sea hydrothermal vents of the Western Pacific

    PubMed Central

    Mino, Sayaka; Makita, Hiroko; Toki, Tomohiro; Miyazaki, Junichi; Kato, Shingo; Watanabe, Hiromi; Imachi, Hiroyuki; Watsuji, Tomo-o; Nunoura, Takuro; Kojima, Shigeaki; Sawabe, Tomoo; Takai, Ken; Nakagawa, Satoshi

    2013-01-01

    Deep-sea hydrothermal vent fields are areas on the seafloor with high biological productivity fueled by microbial chemosynthesis. Members of the Aquificales genus Persephonella are obligately chemosynthetic bacteria, and appear to be key players in carbon, sulfur, and nitrogen cycles in high temperature habitats at deep-sea vents. Although this group of bacteria has cosmopolitan distribution in deep-sea hydrothermal ecosystem around the world, little is known about their population structure such as intraspecific genomic diversity, distribution pattern, and phenotypic diversity. We developed the multi-locus sequence analysis (MLSA) scheme for their genomic characterization. Sequence variation was determined in five housekeeping genes and one functional gene of 36 Persephonella hydrogeniphila strains originated from the Okinawa Trough and the South Mariana Trough (SNT). Although the strains share >98.7% similarities in 16S rRNA gene sequences, MLSA revealed 35 different sequence types (ST), indicating their extensive genomic diversity. A phylogenetic tree inferred from all concatenated gene sequences revealed the clustering of isolates according to the geographic origin. In addition, the phenotypic clustering pattern inferred from whole-cell matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF/MS) analysis can be correlated to their MLSA clustering pattern. This study represents the first MLSA combined with phenotypic analysis indicative of allopatric speciation of deep-sea hydrothermal vent bacteria. PMID:23630523

  3. High fungal diversity and abundance recovered in the deep-sea sediments of the Pacific Ocean.

    PubMed

    Xu, Wei; Pang, Ka-Lai; Luo, Zhu-Hua

    2014-11-01

    Knowledge about the presence and ecological significance of bacteria and archaea in the deep-sea environments has been well recognized, but the eukaryotic microorganisms, such as fungi, have rarely been reported. The present study investigated the composition and abundance of fungal community in the deep-sea sediments of the Pacific Ocean. In this study, a total of 1,947 internal transcribed spacer (ITS) regions of fungal rRNA gene clones were recovered from five sediment samples at the Pacific Ocean (water depths ranging from 5,017 to 6,986 m) using three different PCR primer sets. There were 16, 17, and 15 different operational taxonomic units (OTUs) identified from fungal-universal, Ascomycota-, and Basidiomycota-specific clone libraries, respectively. Majority of the recovered sequences belonged to diverse phylotypes of Ascomycota (25 phylotypes) and Basidiomycota (18 phylotypes). The multiple primer approach totally recovered 27 phylotypes which showed low similarities (≤97 %) with available fungal sequences in the GenBank, suggesting possible new fungal taxa occurring in the deep-sea environments or belonging to taxa not represented in the GenBank. Our results also recovered high fungal LSU rRNA gene copy numbers (3.52 × 10(6) to 5.23 × 10(7)copies/g wet sediment) from the Pacific Ocean sediment samples, suggesting that the fungi might be involved in important ecological functions in the deep-sea environments.

  4. A Deep Sea Docking Station for ODYSSEY Class Autonomous Underwater Vehicles

    DTIC Science & Technology

    2007-11-02

    autonomous midwater missions. The Station is integrated into the main tension member of a deep sea mooring system. A large subsea flotation sphere supports...radio frequency communications. Primary subsystems of the Docking Station described in this report include a dock controller with multi- sensor support

  5. Telepresence-Enabled Remote Fieldwork: Undergraduate Research in the Deep Sea

    ERIC Educational Resources Information Center

    Stephens, A. Lynn; Pallant, Amy; McIntyre, Cynthia

    2016-01-01

    Deep-sea research is rarely available to undergraduate students. However, as telepresence technology becomes more available, doors may open for more undergraduates to pursue research that includes remote fieldwork. This descriptive case study is an initial investigation into whether such technology might provide a feasible opportunity for…

  6. From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria.

    PubMed

    Pérez-Rodríguez, Ileana; Bolognini, Marie; Ricci, Jessica; Bini, Elisabetta; Vetriani, Costantino

    2015-05-01

    Chemosynthetic Epsilonproteobacteria from deep-sea hydrothermal vents colonize substrates exposed to steep thermal and redox gradients. In many bacteria, substrate attachment, biofilm formation, expression of virulence genes and host colonization are partly controlled via a cell density-dependent mechanism involving signal molecules, known as quorum sensing. Within the Epsilonproteobacteria, quorum sensing has been investigated only in human pathogens that use the luxS/autoinducer-2 (AI-2) mechanism to control the expression of some of these functions. In this study we showed that luxS is conserved in Epsilonproteobacteria and that pathogenic and mesophilic members of this class inherited this gene from a thermophilic ancestor. Furthermore, we provide evidence that the luxS gene is expressed--and a quorum-sensing signal is produced--during growth of Sulfurovum lithotrophicum and Caminibacter mediatlanticus, two Epsilonproteobacteria from deep-sea hydrothermal vents. Finally, we detected luxS transcripts in Epsilonproteobacteria-dominated biofilm communities collected from deep-sea hydrothermal vents. Taken together, our findings indicate that the epsiloproteobacterial lineage of the LuxS enzyme originated in high-temperature geothermal environments and that, in vent Epsilonproteobacteria, luxS expression is linked to the production of AI-2 signals, which are likely produced in situ at deep-sea vents. We conclude that the luxS gene is part of the ancestral epsilonproteobacterial genome and represents an evolutionary link that connects thermophiles to human pathogens.

  7. Impacts on the Deep-Sea Ecosystem by a Severe Coastal Storm

    PubMed Central

    Sanchez-Vidal, Anna; Canals, Miquel; Calafat, Antoni M.; Lastras, Galderic; Pedrosa-Pàmies, Rut; Menéndez, Melisa; Medina, Raúl; Company, Joan B.; Hereu, Bernat; Romero, Javier; Alcoverro, Teresa

    2012-01-01

    Major coastal storms, associated with strong winds, high waves and intensified currents, and occasionally with heavy rains and flash floods, are mostly known because of the serious damage they can cause along the shoreline and the threats they pose to navigation. However, there is a profound lack of knowledge on the deep-sea impacts of severe coastal storms. Concurrent measurements of key parameters along the coast and in the deep-sea are extremely rare. Here we present a unique data set showing how one of the most extreme coastal storms of the last decades lashing the Western Mediterranean Sea rapidly impacted the deep-sea ecosystem. The storm peaked the 26th of December 2008 leading to the remobilization of a shallow-water reservoir of marine organic carbon associated with fine particles and resulting in its redistribution across the deep basin. The storm also initiated the movement of large amounts of coarse shelf sediment, which abraded and buried benthic communities. Our findings demonstrate, first, that severe coastal storms are highly efficient in transporting organic carbon from shallow water to deep water, thus contributing to its sequestration and, second, that natural, intermittent atmospheric drivers sensitive to global climate change have the potential to tremendously impact the largest and least known ecosystem on Earth, the deep-sea ecosystem. PMID:22295084

  8. First biological measurements of deep-sea corals from the Red Sea

    PubMed Central

    Roder, C.; Berumen, M. L.; Bouwmeester, J.; Papathanassiou, E.; Al-Suwailem, A.; Voolstra, C. R.

    2013-01-01

    It is usually assumed that metabolic constraints restrict deep-sea corals to cold-water habitats, with ‘deep-sea’ and ‘cold-water’ corals often used as synonymous. Here we report on the first measurements of biological characters of deep-sea corals from the central Red Sea, where they occur at temperatures exceeding 20°C in highly oligotrophic and oxygen-limited waters. Low respiration rates, low calcification rates, and minimized tissue cover indicate that a reduced metabolism is one of the key adaptations to prevailing environmental conditions. We investigated four sites and encountered six species of which at least two appear to be undescribed. One species is previously reported from the Red Sea but occurs in deep cold waters outside the Red Sea raising interesting questions about presumed environmental constraints for other deep-sea corals. Our findings suggest that the present understanding of deep-sea coral persistence and resilience needs to be revisited. PMID:24091830

  9. Deep-Sea Origin and In-Situ Diversification of Chrysogorgiid Octocorals

    PubMed Central

    Pante, Eric; France, Scott C.; Couloux, Arnaud; Cruaud, Corinne; McFadden, Catherine S.; Samadi, Sarah; Watling, Les

    2012-01-01

    The diversity, ubiquity and prevalence in deep waters of the octocoral family Chrysogorgiidae Verrill, 1883 make it noteworthy as a model system to study radiation and diversification in the deep sea. Here we provide the first comprehensive phylogenetic analysis of the Chrysogorgiidae, and compare phylogeny and depth distribution. Phylogenetic relationships among 10 of 14 currently-described Chrysogorgiidae genera were inferred based on mitochondrial (mtMutS, cox1) and nuclear (18S) markers. Bathymetric distribution was estimated from multiple sources, including museum records, a literature review, and our own sampling records (985 stations, 2345 specimens). Genetic analyses suggest that the Chrysogorgiidae as currently described is a polyphyletic family. Shallow-water genera, and two of eight deep-water genera, appear more closely related to other octocoral families than to the remainder of the monophyletic, deep-water chrysogorgiid genera. Monophyletic chrysogorgiids are composed of strictly (Iridogorgia Verrill, 1883, Metallogorgia Versluys, 1902, Radicipes Stearns, 1883, Pseudochrysogorgia Pante & France, 2010) and predominantly (Chrysogorgia Duchassaing & Michelotti, 1864) deep-sea genera that diversified in situ. This group is sister to gold corals (Primnoidae Milne Edwards, 1857) and deep-sea bamboo corals (Keratoisidinae Gray, 1870), whose diversity also peaks in the deep sea. Nine species of Chrysogorgia that were described from depths shallower than 200 m, and mtMutS haplotypes sequenced from specimens sampled as shallow as 101 m, suggest a shallow-water emergence of some Chrysogorgia species. PMID:22723855

  10. Assessing benthic oxygen fluxes in oligotrophic deep sea sediments (HAUSGARTEN observatory)

    NASA Astrophysics Data System (ADS)

    Donis, Daphne; McGinnis, Daniel F.; Holtappels, Moritz; Felden, Janine; Wenzhoefer, Frank

    2016-05-01

    Benthic oxygen fluxes, an established proxy for total organic carbon mineralization, were investigated in oligotrophic deep sea sediments. We used three different in situ technologies to estimate the benthic oxygen fluxes at an Arctic deep sea site (2500 m depth, HAUSGARTEN observatory) with limiting conditions of low oxygen gradients and fluxes, low turbulence and low particle content in the benthic boundary layer. The resolved eddy covariance turbulent oxygen flux (-0.9±0.2 (SD) mmol O2 m-2 d-1) compared well with simultaneous dissolved oxygen flux measurements carried out with a microprofiler (-1.02±0.3 (SD) mmol O2 m-2 d-1) and total oxygen uptake obtained by benthic chamber incubations (-1.1±0.1 (SD) mmol O2 m-2 d-1). The agreement between these different techniques revealed that microbial-mediated oxygen consumption was dominant at this site. The average benthic flux equals a carbon mineralization rate of 4.3 g C m-2 yr-1, which exceeds the annual sedimentation of particulate organic matter measured by sediment traps. The present study represents a detailed comparison of different in situ technologies for benthic flux measurements at different spatial scales in oligotrophic deep sea sediments. The use of eddy covariance, so far rarely used for deep sea investigations, is presented in detail.

  11. A synthesis of genetic connectivity in deep-sea fauna and implications for marine reserve design.

    PubMed

    Baco, Amy R; Etter, Ron J; Ribeiro, Pedro A; von der Heyden, Sophie; Beerli, Peter; Kinlan, Brian P

    2016-07-01

    With anthropogenic impacts rapidly advancing into deeper waters, there is growing interest in establishing deep-sea marine protected areas (MPAs) or reserves. Reserve design depends on estimates of connectivity and scales of dispersal for the taxa of interest. Deep-sea taxa are hypothesized to disperse greater distances than shallow-water taxa, which implies that reserves would need to be larger in size and networks could be more widely spaced; however, this paradigm has not been tested. We compiled population genetic studies of deep-sea fauna and estimated dispersal distances for 51 studies using a method based on isolation-by-distance slopes. Estimates of dispersal distance ranged from 0.24 km to 2028 km with a geometric mean of 33.2 km and differed in relation to taxonomic and life-history factors as well as several study parameters. Dispersal distances were generally greater for fishes than invertebrates with the Mollusca being the least dispersive sampled phylum. Species that are pelagic as adults were more dispersive than those with sessile or sedentary lifestyles. Benthic species from soft-substrate habitats were generally less dispersive than species from hard substrate, demersal or pelagic habitats. As expected, species with pelagic and/or feeding (planktotrophic) larvae were more dispersive than other larval types. Many of these comparisons were confounded by taxonomic or other life-history differences (e.g. fishes being more dispersive than invertebrates) making any simple interpretation difficult. Our results provide the first rough estimate of the range of dispersal distances in the deep sea and allow comparisons to shallow-water assemblages. Overall, dispersal distances were greater for deeper taxa, although the differences were not large (0.3-0.6 orders of magnitude between means), and imbalanced sampling of shallow and deep taxa complicates any simple interpretation. Our analyses suggest the scales of dispersal and connectivity for reserve design

  12. Age of Kōko Seamount, Emperor Seamount chain

    USGS Publications Warehouse

    Clague, David A.; Dalrymple, G. Brent

    1973-01-01

    KAr ages obtained by the conventional isotope-dilution and the 40Ar/39Ar techniques on two sanidine trachytes, four basalts, and a phonolite dredged from the top of Ko¯ko Seamount, 300 km north of the Hawaiian-Emperor bend, show that the seamount is 46.4 ± 1.1 my old. These data indicate that the volcanoes in the Hawaiian-Emperor chain continue to increase in age to the west and north beyond Midway Atoll, as predicted by the melting-spot hypothesis for the origin of the chain, and that the rate of volcanic migration along the chain was nonlinear between the time of formation of the island of Hawaii and Ko¯ko Seamount.

  13. Larval Transport Modeling of Deep-Sea Invertebrates Can Aid the Search for Undiscovered Populations

    PubMed Central

    Yearsley, Jon M.; Sigwart, Julia D.

    2011-01-01

    Background Many deep-sea benthic animals occur in patchy distributions separated by thousands of kilometres, yet because deep-sea habitats are remote, little is known about their larval dispersal. Our novel method simulates dispersal by combining data from the Argo array of autonomous oceanographic probes, deep-sea ecological surveys, and comparative invertebrate physiology. The predicted particle tracks allow quantitative, testable predictions about the dispersal of benthic invertebrate larvae in the south-west Pacific. Principal Findings In a test case presented here, using non-feeding, non-swimming (lecithotrophic trochophore) larvae of polyplacophoran molluscs (chitons), we show that the likely dispersal pathways in a single generation are significantly shorter than the distances between the three known population centres in our study region. The large-scale density of chiton populations throughout our study region is potentially much greater than present survey data suggest, with intermediate ‘stepping stone’ populations yet to be discovered. Conclusions/Significance We present a new method that is broadly applicable to studies of the dispersal of deep-sea organisms. This test case demonstrates the power and potential applications of our new method, in generating quantitative, testable hypotheses at multiple levels to solve the mismatch between observed and expected distributions: probabilistic predictions of locations of intermediate populations, potential alternative dispersal mechanisms, and expected population genetic structure. The global Argo data have never previously been used to address benthic biology, and our method can be applied to any non-swimming larvae of the deep-sea, giving information upon dispersal corridors and population densities in habitats that remain intrinsically difficult to assess. PMID:21857992

  14. Evolutionary and biogeographical patterns of barnacles from deep-sea hydrothermal vents.

    PubMed

    Herrera, Santiago; Watanabe, Hiromi; Shank, Timothy M

    2015-02-01

    The characterization of evolutionary and biogeographical patterns is of fundamental importance to identify factors driving biodiversity. Due to their widespread but discontinuous distribution, deep-sea hydrothermal vent barnacles represent an excellent model for testing biogeographical hypotheses regarding the origin, dispersal and diversity of modern vent fauna. Here, we characterize the global genetic diversity of vent barnacles to infer their time of radiation, place of origin, mode of dispersal and diversification. Our approach was to target a suite of multiple loci in samples representing seven of the eight described genera. We also performed restriction-site associated DNA sequencing on individuals from each species. Phylogenetic inferences and topology hypothesis tests indicate that vent barnacles have colonized deep-sea hydrothermal vents at least twice in history. Consistent with preliminary estimates, we find a likely radiation of barnacles in vent ecosystems during the Cenozoic. Our analyses suggest that the western Pacific was the place of origin of the major vent barnacle lineage, followed by circumglobal colonization eastwards through the Southern Hemisphere during the Neogene. The inferred time of radiation rejects the classic hypotheses of antiquity of vent taxa. The timing and the mode of origin, radiation and dispersal are consistent with recent inferences made for other deep-sea taxa, including nonvent species, and are correlated with the occurrence of major geological events and mass extinctions. Thus, we suggest that the geological processes and dispersal mechanisms discussed here can explain the current distribution patterns of many other marine taxa and have played an important role shaping deep-sea faunal diversity. These results also constitute the critical baseline data with which to assess potential effects of anthropogenic disturbances on deep-sea ecosystems.

  15. Palaeocene-Eocene evolution of a specific group of extinct deep-sea benthic foraminifera.

    NASA Astrophysics Data System (ADS)

    van Kerckhoven, L.; Hayward, B. W.

    2009-04-01

    To increase the understanding of global evolution and extinction drivers in the deep sea, we study the enigmatic extinction of a distinctive group of cosmopolitan deep-sea benthic foraminifera during the late Pliocene-Middle Pleistocene "Last Global Extinction" (LGE) (3 - 0.12 Ma). The LGE was coeval with the pulsed expansion of the northern hemisphere ice cap, rendering deep-sea conditions colder and more oxygenated during increasingly severe glacials. The so-called "Extinction Group", comprising nearly 100 species (c. 25% of deep-sea foraminiferal diversity at that time), all shared a similar morphology of elongate, cylindrical and uniserial tests with small, specialised apertures. To elucidate the factors driving their evolution and ultimate extinction, we extend the studies back in time. During the Cenozoic, the deep-sea benthic foraminiferal community was stirred up by three more intervals of increased turnover (late Palaeocene-early Eocene, Late Eocene-earliest Oligocene and middle Miocene) all of which seem to have coincided with intervals of major climatic change. In a first stage of the research, we performed a low-resolution study of ODP Sites 689 and 1211 to obtain a record of the occurrence and abundance of the "Extinction Group" species throughout the Cenozoic. In a second phase, here presented, the research focuses on a high-resolution study of the "Extinction Group" species in ODP Sites 689 and 690 (Southern Ocean) through the Palaeocene-Eocene warm event, during which 30 to 50 % of benthic foraminiferal species went extinct. Focus on the Palaeocene-Eocene warm period, and investigation of whether this warm event had any impact on the "Extinction Group" species, indicates whether only the cold related events caused the loss of "Extinction Group" taxa and helps us to understand the extent to which the LGE was stress-related or temperature-related.

  16. The transfer of river load to deep-sea fans: A quantitative approach

    SciTech Connect

    Wetzel, A. )

    1993-10-01

    Submarine fans and turbidite systems are major petroleum reservoirs in many sedimentary basins worldwide. The size of a river-fed deep-sea fan is controlled mainly by the amount of sediment available from a terrestrial source, whereas sea level fluctuations only trigger mass transfer to the deep sea. The deposition rate and fan length correlate for most fans formed on abyssal plains. Fan size is independent of depositional environment (lake or sea), time span, or geological period, which may be characterized by different amplitudes and frequencies of sea level fluctuations. In climatically stable regions such as the tropics about 25 [+-] 10% of the suspended river load reaching the river mouth is transported to the deep sea over the long term. The type of river mouth affects the amount of material transported to the deep sea; estuaries with deeply incised canyons may transfer 6-8 times more material than fluvial-dominated and lobate deltas, provided the suspended river load is equal in both cases. For most river-fed deep-sea fans, a well-defined geometry develops on unconfined abyssal plains. The width/length ratio is about 0.2 at the base of the slope, and reaches a maximum of 0.5 farther downward. This is in good agreement with flume experiments. The volume of such fans resting on a planar base is roughly 0.35 [times] area [times] maximum thickness. The quantitative relationships of fans with respect to geometry, deposition rate, and river suspended discharge may provide some basic for basin modeling and calculation of the sediment budget of erosional-depositional systems.

  17. Tephrostratigraphy study for the last 18,000 14C years in a deep-sea sediment sequence for the South Adriatic

    NASA Astrophysics Data System (ADS)

    Siani, Giuseppe; Sulpizio, Roberto; Paterne, Martine; Sbrana, Alessandro

    2004-12-01

    A detailed tephrostratigraphy supported by accelerator mass spectrometry (AMS) 14C dating and isotopic and geochemical analyses has been carried out for a deep-sea core collected from the Southern Adriatic Sea, which spans the last 18 14C kyr. Fourteen ash layers have been recognized in the marine core and the origin was determined by comparing their age and geochemistry with tephra detected in terrestrial deposits. The geochemical signatures of marine ash layers indicate a prevailing Campanian and subordinate Etnean and Eolian provenances. Collectively, they are attributed to sources in the Phlegraean Fields (LAM-Lagno Amendolare; LN1/LN2-GM1; C-2/NYT-Neapolitan Yellow Tuff; C-1-Agnano Pomici Principali; AMS/PF-Agnano Monte Spina; AST-Astroni), Somma-Vesuvius (L9-Pomici di Base; L8-Greenish), Mount Etna (Et1-Y1-Biancavilla Ignimbrite), Lipari (E-1-Gabellotto-Fiumebianco) and Palinuro seamount (Pal 1). Some of these eruptions have been detected for the first time in marine cores (Astroni, LAM, L9, L8), and three were detected and dated by marine tephra (LN1, LN2, and Pal 1) providing new more precise stratigraphic markers for the last 18 kyr in the South Adriatic marine record.

  18. Discoveries and Conservation Efforts of Extensive Deep-Sea Coral Habitat off the Southeastern U.S.

    NASA Astrophysics Data System (ADS)

    Reed, J. K.; Messing, C. G.; Walker, B. K.; Farrington, S.; Brooke, S.; Correa, T.; Brouwer, M.

    2012-12-01

    Fishery Management Council (SAFMC), which led to the designation of some of these areas as HAPCs or marine protected areas, restricting bottom trawling, longlines and traps that could be destructive to the fragile coral and sponge habitat. In 2010, NOAA established five deep-water Coral HAPCs encompassing a total area of 62,714 km2 from North Carolina to south Florida; an estimated 69% of the total area of the CHAPCs is off Florida. However, we estimate that ~6,554 km2 (29.7%) of DSCE habitat remains unprotected and outside the boundaries of the CHAPCs in U.S. waters off Florida. Many activities may impact DCSEs, including bottom trawling, energy production, and even global warming. Cuba has recently opened its north slope for deep-sea oil/gas drilling, which could have serious impacts upon both deep and shallow water reefs and coastal areas of the U.S. upstream of these drilling sites. Baseline data is critical to understanding the effects of these anthropogenic activities son DSCEs. High-resolution sonar surveys combined with visual ground-truthing to create deep-water benthic habitat maps are necessary to further define the extent of DSCEs in order to protect and conserve these critical habitats.

  19. Organic biomarkers in deep-sea regions affected by bottom trawling: pigments, fatty acids, amino acids and carbohydrates in surface sediments from the La Fonera (Palamós) Canyon, NW Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Sañé, E.; Martín, J.; Puig, P.; Palanques, A.

    2013-12-01

    Deep-sea ecosystems are in general adapted to a limited variability of physical conditions, resulting in high vulnerability and slow recovery rates from anthropogenic perturbations such as bottom trawling. Commercial trawling is the most recurrent and pervasive of human impacts on the deep-sea floor, but studies on its consequences on the biogeochemistry of deep-sea sediments are still scarce. Pigments, fatty acids, amino acids and carbohydrates were analysed in sediments from the flanks of the La Fonera (Palamós) submarine canyon (NW Mediterranean Sea), where a commercial bottom trawling fishery has been active for more than 70 yr. More specifically, we investigated how trawling-induced sediment reworking affects the quality of sedimentary organic matter which reaches the seafloor and accumulates in the sediment column, which is fundamental for the development of benthic communities. Sediment samples were collected during two oceanographic cruises in spring and autumn 2011. The sampled sites included trawl fishing grounds as well as pristine (control) areas. We report that bottom trawling in the flanks of the La Fonera Canyon has caused an alteration of the quality of the organic matter accumulated in the upper 5 cm of the seafloor. The use of a wide pool of biochemical tracers characterized by different reactivity to degradation allowed for us to discriminate the long-term effects of trawl-induced sediment reworking from the natural variability caused by the seasonal cycle of production and sinking of biogenic particles. Differences between untrawled and trawled areas were evidenced by labile amino acids, while differences between spring and autumn samples were detected only by the more labile indicators chlorophyll a and monounsaturated fatty acids. These results suggest that changes in the biochemical composition of the sedimentary organic matter caused by bottom trawling can be more relevant than those associated with natural seasonality and pose serious

  20. Organic biomarkers in deep-sea regions affected by bottom trawling: pigments, fatty acids, amino acids and carbohydrates in surface sediments from the La Fonera (Palamós) Canyon, NW Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Sañé, E.; Martín, J.; Puig, P.; Palanques, A.

    2012-12-01

    Deep-sea ecosystems are in general adapted to a limited variability of physical conditions, resulting in high vulnerability and slow recovery rates from anthropogenic perturbations such as bottom trawling. Commercial trawling is the most recurrent and pervasive of human impacts on the deep-sea floor, but studies on its consequences on the biogeochemistry of deep-sea sediments are still scarce. Pigments, fatty acids, amino acids and carbohydrates were analyzed in sediments from the flanks of the La Fonera (Palamós) submarine canyon (NW Mediterranean Sea), where a commercial bottom trawling fishery has been active for more than 70 yr. More specifically, we investigated how trawling-induced sediment reworking affects the quality of sedimentary organic matter which reaches the seafloor and accumulates in the sediment column, which is fundamental for the development of benthic communities. Sediment samples were collected during two oceanographic cruises in spring and autumn 2011. The sampled sites included trawl fishing grounds as well as pristine (control) areas. We report that bottom trawling in the flanks of the La Fonera Canyon has caused an alteration of the quality of the organic matter accumulated in the upper 5 cm of the seafloor. The use of a wide pool of biochemical tracers characterized by different reactivity to degradation allowed us to discriminate the long-term effects of trawled-induced sediment reworking from the natural variability caused by the seasonal cycle of production and sinking of biogenic particles. Differences between untrawled and trawled areas were evidenced by labile amino acids, while differences between spring and autumn samples were detected only by the more labile indicators chlorophyll a and mono-unsaturated fatty acids. These results suggest that changes in the biochemical composition of the sedimentary organic matter caused by bottom trawling can be more relevant than those associated with natural seasonality and pose serious

  1. Utility of deep sea CO2 release experiments in understanding the biology of a high-CO2 ocean: Effects of hypercapnia on deep sea meiofauna

    NASA Astrophysics Data System (ADS)

    Barry, James P.; Buck, Kurt R.; Lovera, Chris; Kuhnz, Linda; Whaling, Patrick J.

    2005-09-01

    Oceanic CO2 levels are expected to rise during the next 2 centuries to levels not seen for 10-150 million years by the uptake of atmospheric CO2 in surface waters or potentially through the disposal of waste CO2 in the deep sea. Changes in ocean chemistry caused by CO2 influx may have broad impacts on ocean ecosystems. Physiological processes animals use to cope with CO2-related stress are known, but the range of sensitivities and effects of changes in ocean chemistry on most ocean life remain unclear. We evaluate the effectiveness of various designs for in situ CO2 release experiments in producing stable perturbations in seawater chemistry over experimental seafloor plots, as is desirable for evaluating the CO2 sensitivities of deep sea animals. We also discuss results from a subset of these experiments on the impacts of hypercapnia on deep sea meiofauna, in the context of experimental designs. Five experiments off central California show that pH perturbations were greatest for experiments using "point source" CO2 pools surrounded by experimental plots. CO2 enclosure experiments with experimental plots positioned within a circular arrangement of CO2 pools had more moderate pH variation. The concentration of dissolution plumes from CO2 pools were related to the speed and turbulence of near-bottom currents, which influence CO2 dissolution and advection. Survival of meiofauna (nematodes, amoebae, euglenoid flagellates) was low after episodic severe hypercapnia but lower and variable where pH changes ranged from 0 to 0.2 pH units below normal.

  2. Deep-sea macroplankton distribution (at 400 to 2300 m) in the northwestern Mediterranean in relation to environmental factors

    NASA Astrophysics Data System (ADS)

    Cartes, J. E.; Fanelli, E.; López-Pérez, C.; Lebrato, M.

    2013-03-01

    Changes in the composition and biomass distribution of deep-living zooplankton over wide gradients of depth (400-2300 m) and longitude (~ 180 km) have been analyzed in the Balearic Basin (western Mediterranean), seeking the environmental variables responsible for these changes. Zooplankton tends to aggregate at different levels of the water column (forming Deep Scattering Layers, DSL) and in the Benthic Boundary Layer (BBL). Macrozooplankton biomass and composition were analyzed along a transect performed in July 2010 in midwater (between ~ 350 and 450 m) and near the bottom (at ~ 5-200 mab), over soundings of 450-2263 m, including the top of Valencia Seamount (at ~ 40° 25' N-02° 42' E, 1076 m). Zooplankton changed significantly in composition at the mesoscale (~ 180 km) in both the DSL and the BBL. Siphonophores and calanoid copepods were the most dominant deep zooplankton taxa, calanoids reaching higher abundance in the BBL (1761-5177 individuals/1000 m3) than in the DSL (1568-1743 individuals/1000 m3). There was a significant increase in near-bottom zooplankton biomass over the middle slope, at 1000-1300 m, linked to an increase in scyphozoans and siphonophores (Lensia spp. and Abylopsis tetragona) with peaks of 1.5-2.0 gWW/1000 m3. The peak of near-bottom zooplankton at 1000-1300 m coincided with the lowest temperatures (13.08 °C) and maximum O2 concentration (4.40 ml/l) near the bottom and below 1000 m with higher records in near-bottom turbidity. Gelatinous zooplankton are the main prey in the diet of the demersal fish Alepocephalus rostratus in the western Mediterranean, fish responsible for the peak of megafauna biomass reported at around 1200-1400 m in the deep Mediterranean and at similar depths in other oceanic areas (e.g. the NW Atlantic). We suggest that deep-sea environmental conditions can govern peaks of near-bottom zooplankton, as well as influence the structure of the demersal fish community.

  3. Development of a genetic system for the deep-sea psychrophilic bacterium Pseudoalteromonas sp. SM9913

    PubMed Central

    2014-01-01

    Background Pseudoalteromonas species are a group of marine gammaproteobacteria frequently found in deep-sea sediments, which may play important roles in deep-sea sediment ecosystem. Although genome sequence analysis of Pseudoalteromonas has revealed some specific features associated with adaptation to the extreme deep-sea environment, it is still difficult to study how Pseudoalteromonas adapt to the deep-sea environment due to the lack of a genetic manipulation system. The aim of this study is to develop a genetic system in the deep-sea sedimentary bacterium Pseudoalteromonas sp. SM9913, making it possible to perform gene mutation by homologous recombination. Results The sensitivity of Pseudoalteromonas sp. SM9913 to antibiotic was investigated and the erythromycin resistance gene was chosen as the selective marker. A shuttle vector pOriT-4Em was constructed and transferred into Pseudoalteromonas sp. SM9913 through intergeneric conjugation with an efficiency of 1.8 × 10-3, which is high enough to perform the gene knockout assay. A suicide vector pMT was constructed using pOriT-4Em as the bone vector and sacB gene as the counterselective marker. The epsT gene encoding the UDP-glucose lipid carrier transferase was selected as the target gene for inactivation by in-frame deletion. The epsT was in-frame deleted using a two-step integration–segregation strategy after transferring the suicide vector pMT into Pseudoalteromonas sp. SM9913. The ΔepsT mutant showed approximately 73% decrease in the yield of exopolysaccharides, indicating that epsT is an important gene involved in the EPS production of SM9913. Conclusions A conjugal transfer system was constructed in Pseudoalteromonas sp. SM9913 with a wide temperature range for selection and a high transfer efficiency, which will lay the foundation of genetic manipulation in this strain. The epsT gene of SM9913 was successfully deleted with no selective marker left in the chromosome of the host, which thus make it

  4. Deep-sea pennatulaceans (sea pens) - recent discoveries, morphological adaptations, and responses to benthic oceanographic parameters

    NASA Astrophysics Data System (ADS)

    Williams, G. C.

    2015-12-01

    Pennatulaceans are sessile, benthic marine organisms that are bathymetrically wide-ranging, from the intertidal to approximately 6300 m in depth, and are conspicuous constituents of deep-sea environments. The vast majority of species are adapted for anchoring in soft sediments by the cylindrical peduncle - a muscular hydrostatic skeleton. However, in the past decade a few species ("Rockpens") have been discovered and described that can attach to hard substratum such as exposed rocky outcrops at depths between 669 and 1969 m, by a plunger-like adaptation of the base of the peduncle. Of the thirty-six known genera, eleven (or 30%) have been recorded from depths greater than 1000 m. The pennatulacean depth record holders are an unidentified species of Umbellula from 6260 m in the Peru-Chile Trench and a recently-discovered and described genus and species, Porcupinella profunda, from 5300 m the Porcupine Abyssal Plain of the northeastern Atlantic. A morphologically-differentiated type of polyp (acrozooid) have recently been discovered and described in two genera of shallow-water coral reef sea pens. Acrozooids apparently represent asexual buds and presumably can detach from the adult to start clonal colonies through asexual budding. Acrozooids are to be expected in deep-sea pennatulaceans, but so far have not been observed below 24 m in depth. Morphological responses at depths greater than 1000 m in deep-sea pennatulaceas include: fewer polyps, larger polyps, elongated stalks, and clustering of polyps along the rachis. Responses to deep-ocean physical parameters and anthropogenic changes that could affect the abundance and distribution of deep-sea pennatulaceans include changes in bottom current flow and food availability, changes in seawater temperature and pH, habitat destruction by fish trawling, and sunken refuse pollution. No evidence of the effects of ocean acidification or other effects of anthropogenic climate change in sea pens of the deep-sea has been

  5. Sensitivity of the deep-sea amphipod Eurythenes gryllus to chemically dispersed oil.

    PubMed

    Olsen, Gro Harlaug; Coquillé, Nathalie; Le Floch, Stephane; Geraudie, Perrine; Dussauze, Matthieu; Lemaire, Philippe; Camus, Lionel

    2016-04-01

    In the context of an oil spill accident and the following oil spill response, much attention is given to the use of dispersants. Dispersants are used to disperse an oil slick from the sea surface into the water column generating a cloud of dispersed oil droplets. The main consequence is an increasing of the sea water-oil interface which induces an increase of the oil biodegradation. Hence, the use of dispersants can be effective in preventing oiling of sensitive coastal environments. Also, in case of an oil blowout from the seabed, subsea injection of dispersants may offer some benefits compared to containment and recovery of the oil or in situ burning operation at the sea surface. However, biological effects of dispersed oil are poorly understood for deep-sea species. Most effects studies on dispersed oil and also other oil-related compounds have been focusing on more shallow water species. This is the first approach to assess the sensitivity of a macro-benthic deep-sea organism to dispersed oil. This paper describes a toxicity test which was performed on the macro-benthic deep-sea amphipod (Eurythenes gryllus) to determine the concentration causing lethality to 50% of test individuals (LC50) after an exposure to dispersed Brut Arabian Light (BAL) oil. The LC50 (24 h) was 101 and 24 mg L(-1) after 72 h and 12 mg L(-1) at 96 h. Based on EPA scale of toxicity categories to aquatic organisms, an LC50 (96 h) of 12 mg L(-1) indicates that the dispersed oil was slightly to moderately toxic to E. gryllus. As an attempt to compare our results to others, a literature study was performed. Due to limited amount of data available for dispersed oil and amphipods, information on other crustacean species and other oil-related compounds was also collected. Only one study on dispersed oil and amphipods was found, the LC50 value in this study was similar to the LC50 value of E. gryllus in our study. Since toxicity data are important input to risk assessment and net environmental

  6. Pre to Post-Bomb Seawater 14C History in the Gulf of Alaska Inferred From a Deep Sea Coral: Isididae sp.

    NASA Astrophysics Data System (ADS)

    Roark, B.; Guilderson, T. P.; Fallon, S.; Dunbar, R. B.; McCulloch, M.

    2006-12-01

    Deep-sea corals are an important archive of intermediate and deep-water variability, and provide the means to explore decadal to century-scale ocean dynamics in regions and time periods heretofore unexplored. We present a reconstruction of pre to post-bomb surface and interior water Δ14C based on analysis of deep-sea Isididae (bamboo) corals collected live at ~700 meters in June 2002 at Warwick Seamount, Gulf of Alaska. Concurrent isotope analyses of polyp/tissue and outermost portion of the hard horny proteinaceous gorgonin nodes compared with in situ dissolved inorganic carbon indicates that the gorgonin portion is derived exclusively from recently fixed/exported particulate organic carbon and thus a record of the surface water 14C/12C history. This is in contrast to the carbonate internode portion which is primarily derived from in situ dissolved inorganic carbon, and thus a record of the in situ 14C/12C. Radiocarbon analysis of gorgonin nodal sections captures the surface water D14C evolution. Pre-bomb values are -105‰ reaching a maximum of 100‰ before decreasing to collection values of 20‰. We anticipate that the post-bomb maximum will be in the early 1970s consistent with other mid to high latitude records and that the pre/post bomb transition initiates near 1956. If we utilize the gorgonin pre/post bomb transition as a tie-point and assume a linear growth rate the Isididae used in this study are 75- 125 years old. Carbonate Δ14C shows a 25‰ increase from -215 to -190‰ reflecting the penetration of bomb-14C in the sub-polar North Pacific. To place the carbonate time-series on a fixed timescale we determined the minor element chemistry and tested the inter-species reproducibility. The distribution of Sr is quite homogenous whereas Mg is not with higher Mg concentrations associated with centers of calcification. Age estimates using what appear to be annual Sr/Ca cycles, which we hypothesize are related to biomineralization cycles associated with a

  7. 76 FR 81844 - Fisheries of the Northeastern United States; Removal of Standardized Bycatch Reporting...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-12-29

    ... provisions were located. In addition, the final rule implementing Amendment 11 to the Atlantic Sea Scallop... multispecies, monkfish; summer flounder; scup; black sea bass; bluefish; Atlantic herring; spiny dogfish; deep-sea red crab; and tilefish fisheries. This action also makes changes to the regulations...

  8. Spontaneous and Widespread Electricity Generation in Natural Deep-Sea Hydrothermal Fields.

    PubMed

    Yamamoto, Masahiro; Nakamura, Ryuhei; Kasaya, Takafumi; Kumagai, Hidenori; Suzuki, Katsuhiko; Takai, Ken

    2017-04-05

    Deep-sea hydrothermal vents discharge abundant reductive energy into oxidative seawater. Herein, we demonstrated that in situ measurements of redox potentials on the surfaces of active hydrothermal mineral deposits were more negative than the surrounding seawater potential, driving electrical current generation. We also demonstrated that negative potentials in the surface of minerals were widespread in the hydrothermal fields, regardless of the proximity to hydrothermal fluid discharges. Lab experiments verified that the negative potential of the mineral surface was induced by a distant electron transfer from the hydrothermal fluid through the metallic and catalytic properties of minerals. These results indicate that electric current is spontaneously and widely generated in natural mineral deposits in deep-sea hydrothermal fields. Our discovery provides important insights into the microbial communities that are supported by extracellular electron transfer and the prebiotic chemical and metabolic evolution of the ocean hydrothermal systems.

  9. Diversification of acorn worms (Hemichordata, Enteropneusta) revealed in the deep sea.

    PubMed

    Osborn, Karen J; Kuhnz, Linda A; Priede, Imants G; Urata, Makoto; Gebruk, Andrey V; Holland, Nicholas D

    2012-04-22

    Enteropneusts (phylum Hemichordata), although studied extensively because of their close relationship to chordates, have long been considered shallow-water, burrowing animals. The present paper more than doubles the number of enteropneust species recorded in the deep sea based on high-resolution imaging and sampling with remotely operated vehicles. We provide direct evidence that some enteropneusts are highly mobile-using changes in posture and currents to drift between feeding sites-and are prominent members of deep, epibenthic communities. In addition, we provide ecological information for each species. We also show that despite their great morphological diversity, most deep-living enteropneusts form a single clade (the rediagnosed family Torquaratoridae) on the basis of rDNA sequences and morphology of the proboscis skeleton and stomochord. The phylogenetic position of the torquaratorids indicates that the group, after evolving from near-shore ancestors, radiated extensively in the deep sea.

  10. Mercury in recent and century-old deep-sea fish. [Antimora rostrata

    SciTech Connect

    Barber, R.T.; Whaling, P.J.; Cohen, D.M.

    1984-01-01

    To determine if mercury discharges to the environment in the last century have increased the mercury content of marine fish, a sample of 21 specimens of one deep-sea fish species collected in the 1880s was compared with a sample of 66 specimens of the same species collected in the 1970s. The specimens of Antimore rostrata were collected from between 2000 and 3000 m in the western North Atlantic Ocean. In both recent and old fish mercury increased as a function of length, but comparison of the two concentration vs. length relationships shows that there has not been an increase in mercury concentration in deep-sea fish in the last century. This result supports the idea that the relatively high concentrations of mercury found in marine fish that inhabit the surface and deep waters of the open ocean result from natural processes, not 20th century industrial pollution.

  11. Diterpenoid compounds and other lipids in deep-sea sediments and their geochemical significance

    NASA Technical Reports Server (NTRS)

    Simoneit, B. R. T.

    1977-01-01

    Cyclic diterpenoid compounds have been found by various investigators in the geosphere (e.g., fossil resins, coals, soil, shale, and deep-sea sediments). These compounds occur in significant amounts only in higher plants and are therefore potential markers of terrigenous plant lipids. Diterpenoids with the abietane skeleton (mainly dehydroabietic acid) have been identified in the lipids of sediment samples from the northeast Pacific Ocean, Black Sea, and North Atlantic Ocean. The presence of these resin-derived compounds was correlated with the terrigenous clay components and with the presence of pollen. The presence of polycyclic diterpenoids was also correlated with the distribution patterns and inferred sources of other sediment lipid constituents. Potamic transport, followed by turbidite redistribution, is the probable input mechanism of these resin-derived compounds to the deep-sea sediments. These diterpenoids appear to be excellent biological markers of resinous higher plants.

  12. A checklist of the deep sea fishes of the Levant Sea, Mediterranean Sea.

    PubMed

    Goren, Menachem; Galil, Bella S

    2015-08-04

    We list sixty five fish species collected at depths greater than 500 m in the Levant Basin, including 10 depth records. The Levantine bathyal ichthyofauna is characterized by its eurybathy, with an upper bathymetric boundary that permitted penetration of the shallow Gibraltar and Siculo-Tunisian sills, and a much lower bathymetric boundary than recorded for conspecifics elsewhere. The opportunistic and resilient ichthyofauna re-colonized recently the deep-sea following the last anoxic event (~ 6 kyr), forming assemblages notably distinct from those in the western Mediterranean. The exploration and production of deep seabed hydrocarbons have raised the specter of severe direct impacts to the deep habitats. There is an urgent need for documenting the full extent of deep-sea biodiversity, and for providing information for the development of competent and pragmatic management plans and effective conservation policies.

  13. The bathymetric distribution of the digenean parasites of deep-sea fishes.

    PubMed

    Bray, Rodney A

    2004-06-01

    The bathymetric range of 149 digenean species recorded deeper than 200 m, the approximate depth of the continental shelf/slope break, are presented in graphical form. It is found that only representatives of the four families Lepocreadiidae, Fellodistomidae, Derogenidae and Hemiuridae reach to abyssal regions (>4000 m). Three other families, the Lecithasteridae, Zoogonidae and Opecoelidae, have truly deep-water forms reaching deeper than 3000 m. Bathymetric data are available for the Acanthocolpidae, Accacoeliidae, Bucephalidae, Cryptogonimidae, Faustulidae, Gorgoderidae, Monorchiidae and Sanguinicolidae showing that they reach deeper than 200 m. No bathymetric data are available for the members of the Bivesiculidae and Hirudinellidae which are reported from deep-sea hosts. These results indicate that only seventeen out of the 150 or so digenean families are reported in the deep sea.

  14. New Prionospio and Aurospio Species from the Deep Sea (Annelida: Polychaeta).

    PubMed

    Paterson, Gordon L J; Neal, Lenka; Altamira, Iris; Soto, Eulogio H; Smith, Craig R; Menot, Lenaick; Billett, David S M; Cunha, Marina R; Marchais-Laguionie, Claire; Glover, Adrian G

    2016-03-14

    The number of records of the genus Prionospio Malmgren, 1867, from the deep sea (>2000 m) are relatively few and do not reflect the actual occurrence of species nor their potential ecological importance. In this paper we describe five new species of this genus (Prionospio amarsupiata sp. nov., P. vallensis sp. nov., P. branchilucida sp. nov., P. hermesia sp. nov. and P. kaplani sp. nov.) all of which are abundant members of the deep-sea community. We also describe two new species of the genus Aurospio Maciolek, 1981 (Aurospio abranchiata sp. nov. and A. tribranchiata sp. nov.) again common elements of the abyssal fauna. Two of the new species have characters which question the generic distinctiveness of Prionospio and Aurospio. The problems in differentiating these two genera are discussed.

  15. Surface-generated mesoscale eddies transport deep-sea products from hydrothermal vents.

    PubMed

    Adams, Diane K; McGillicuddy, Dennis J; Zamudio, Luis; Thurnherr, Andreas M; Liang, Xinfeng; Rouxel, Olivier; German, Christopher R; Mullineaux, Lauren S

    2011-04-29

    Atmospheric forcing, which is known to have a strong influence on surface ocean dynamics and production, is typically not considered in studies of the deep sea. Our observations and models demonstrate an unexpected influence of surface-generated mesoscale eddies in the transport of hydrothermal vent efflux and of vent larvae away from the northern East Pacific Rise. Transport by these deep-reaching eddies provides a mechanism for spreading the hydrothermal chemical and heat flux into the deep-ocean interior and for dispersing propagules hundreds of kilometers between isolated and ephemeral communities. Because the eddies interacting with the East Pacific Rise are formed seasonally and are sensitive to phenomena such as El Niño, they have the potential to introduce seasonal to interannual atmospheric variations into the deep sea.

  16. Microbial iron uptake as a mechanism for dispersing iron from deep-sea hydrothermal vents.

    PubMed

    Li, Meng; Toner, Brandy M; Baker, Brett J; Breier, John A; Sheik, Cody S; Dick, Gregory J

    2014-01-01

    Deep-sea hydrothermal vents are a significant source of oceanic iron. Although hydrothermal iron rapidly precipitates as inorganic minerals on mixing with seawater, it can be stabilized by organic matter and dispersed more widely than previously recognized. The nature and source of this organic matter is unknown. Here we show that microbial genes involved in cellular iron uptake are highly expressed in the Guaymas Basin deep-sea hydrothermal plume. The nature of these microbial iron transporters, taken together with the low concentration of dissolved iron and abundance of particulate iron in the plume, indicates that iron minerals are the target for this microbial scavenging and uptake. Our findings indicate that cellular iron uptake is a major process in plume microbial communities and suggest new mechanisms for generating Fe-C complexes. This 'microbial iron pump' could represent an important mode of converting hydrothermal iron into bioavailable forms that can be dispersed throughout the oceans.

  17. Simply actuated closure for a pressure vessel - Design for use to trap deep-sea animals

    NASA Technical Reports Server (NTRS)

    Yayanos, A. A.

    1977-01-01

    A pressure vessel is described that can be closed by a single translational motion within 1 sec. The vessel is a key component of a trap for small marine animals and operates automatically on the sea floor. As the vessel descends to the sea floor, it is subjected both internally and externally to the high pressures of the deep sea. The mechanism for closing the pressure vessel on the sea floor is activated by the timed release of the ballast which was used to sink the trap. As it rises to the sea surface, the internal pressure of the vessel remains near the value present on the sea floor. The pressure vessel has been used in simulated ocean deployments and in the deep ocean (9500 m) with a 75%-85% retention of the deep-sea pressure. Nearly 100% retention of pressure can be achieved by using an accumulator filled with a gas.

  18. First discovery of the organic materials in deep-sea iron cosmic spherule

    NASA Technical Reports Server (NTRS)

    Hanchang, Peng; Peicang, XU

    1993-01-01

    The dust impact mass analyzer (PUMA) carried by the spacecraft Vega 1, Vega 2 and Giotto has provided the first direct measurements of the physical and chemical properties of cometary dust. The results indicate that most of the cometary dust particles are rich in light elements such as H, C, N, and O, suggesting the validity of models that describe the cometary dust as including organic material. Up to now, there were none found with the organic material from the deep-sea cosmic spherules. We have determined this from the deep-sea iron cosmic spherules collected from the North Pacific. An iron cosmic spherule (382 microns in diameter) was determined by the Laser Raman Microprobe.

  19. Estimation of the Iron Loss in Deep-Sea Permanent Magnet Motors considering Seawater Compressive Stress

    PubMed Central

    Wei, Yanyu; Zou, Jibin; Li, Jianjun; Qi, Wenjuan; Li, Yong

    2014-01-01

    Deep-sea permanent magnet motor equipped with fluid compensated pressure-tolerant system is compressed by the high pressure fluid both outside and inside. The induced stress distribution in stator core is significantly different from that in land type motor. Its effect on the magnetic properties of stator core is important for deep-sea motor designers but seldom reported. In this paper, the stress distribution in stator core, regarding the seawater compressive stress, is calculated by 2D finite element method (FEM). The effect of compressive stress on magnetic properties of electrical steel sheet, that is, permeability, BH curves, and BW curves, is also measured. Then, based on the measured magnetic properties and calculated stress distribution, the stator iron loss is estimated by stress-electromagnetics-coupling FEM. At last the estimation is verified by experiment. Both the calculated and measured results show that stator iron loss increases obviously with the seawater compressive stress. PMID:25177717

  20. The giant deep-sea octopus Haliphron atlanticus forages on gelatinous fauna

    PubMed Central

    Hoving, H.J.T.; Haddock, S.H.D.

    2017-01-01

    Feeding strategies and predator-prey interactions of many deep-sea pelagic organisms are still unknown. This is also true for pelagic cephalopods, some of which are very abundant in oceanic ecosystems and which are known for their elaborate behaviors and central role in many foodwebs. We report on the first observations of the giant deep-sea octopus Haliphron atlanticus with prey. Using remotely operated vehicles, we saw these giant octopods holding medusae in their arms. One of the medusae could be identified as Phacellophora camtschatica (the egg-yolk jelly). Stomach content analysis confirmed predation on cnidarians and gelatinous organisms. The relationship between medusae and H. atlanticus is discussed, also in comparison with other species of the Argonautoidea, all of which have close relationships with gelatinous zooplankton. PMID:28344325

  1. Deep-Sea Field Studies of the Biological Consequences of Direct Ocean CO2 Sequestration

    NASA Astrophysics Data System (ADS)

    Barry, J. P.; Seibel, B. A.; Lovera, C.

    2001-12-01

    While the notion of carbon sequestration by direct ocean disposal of CO2 in the deep ocean holds promise for mitigating atmospheric greenhouse warming, the consequences of this approach for deep-sea ecosystems are understood poorly, but are potentially large. Several factors suggest that deep-sea fauna may be more sensitive to deep-sea CO2 releases than related groups inhabiting the upper ocean. The evolution of deep-sea species in the relatively invariant environment of the deep ocean has likely led to the intolerance of many species to perturbations in seawater chemistry associated with direct CO2 injection (e.g. pH reduction) that may be more tolerable to shallow-living groups. Food limitation and reduced metabolic rates typical in deep-sea ecosystems may also limit the ability of many organisms to tolerate changes in pH (i.e. pH compensation) or CO2 (e.g. metabolic depression). We recently performed field experiments at depths from 3000 to 3600 m to evaluate the biological responses of representative deep-sea organisms to changes in seawater chemistry caused by carbon dioxide sequestration. Several small pools (ca. 15 l) of liquid CO2 were deployed on the seafloor from the ROV Tiburon operated by the Monterey Bay Aquarium Research Institute, using a novel CO2 release system. Rates of survival and aspects of the physiological condition of various elements of the seafloor faunal community were compared between sites near (<1 m) and distant (control sites >30 m away) from CO2 pools. Tidally oscillating currents swept a plume of CO2-rich water away from the pools as the liquid CO2 dissolved, resulting in periodic reductions of pH around the pools to 6.0 to 7.0 units within 1 m. Rates of survival for two common megafaunal echinoderms (echinoid 1 and holothurian 1) held in cages adjacent to CO2 pools were very low compared were compared to control sites. Decalcification of urchin spines and skeletal elements was evident for animals near CO2 pools. The abundances of

  2. Estimation of the iron loss in deep-sea permanent magnet motors considering seawater compressive stress.

    PubMed

    Xu, Yongxiang; Wei, Yanyu; Zou, Jibin; Li, Jianjun; Qi, Wenjuan; Li, Yong

    2014-01-01

    Deep-sea permanent magnet motor equipped with fluid compensated pressure-tolerant system is compressed by the high pressure fluid both outside and inside. The induced stress distribution in stator core is significantly different from that in land type motor. Its effect on the magnetic properties of stator core is important for deep-sea motor designers but seldom reported. In this paper, the stress distribution in stator core, regarding the seawater compressive stress, is calculated by 2D finite element method (FEM). The effect of compressive stress on magnetic properties of electrical steel sheet, that is, permeability, BH curves, and BW curves, is also measured. Then, based on the measured magnetic properties and calculated stress distribution, the stator iron loss is estimated by stress-electromagnetics-coupling FEM. At last the estimation is verified by experiment. Both the calculated and measured results show that stator iron loss increases obviously with the seawater compressive stress.

  3. The giant deep-sea octopus Haliphron atlanticus forages on gelatinous fauna.

    PubMed

    Hoving, H J T; Haddock, S H D

    2017-03-27

    Feeding strategies and predator-prey interactions of many deep-sea pelagic organisms are still unknown. This is also true for pelagic cephalopods, some of which are very abundant in oceanic ecosystems and which are known for their elaborate behaviors and central role in many foodwebs. We report on the first observations of the giant deep-sea octopus Haliphron atlanticus with prey. Using remotely operated vehicles, we saw these giant octopods holding medusae in their arms. One of the medusae could be identified as Phacellophora camtschatica (the egg-yolk jelly). Stomach content analysis confirmed predation on cnidarians and gelatinous organisms. The relationship between medusae and H. atlanticus is discussed, also in comparison with other species of the Argonautoidea, all of which have close relationships with gelatinous zooplankton.

  4. New ultrasensitive pickup device for deep-sea robots: underwater super-HARP color TV camera

    NASA Astrophysics Data System (ADS)

    Maruyama, Hirotaka; Tanioka, Kenkichi; Uchida, Tetsuo

    1994-11-01

    An ultra-sensitive underwater super-HARP color TV camera has been developed. The characteristics -- spectral response, lag, etc. -- of the super-HARP tube had to be designed for use underwater because the propagation of light in water is very different from that in air, and also depends on the light's wavelength. The tubes have new electrostatic focusing and magnetic deflection functions and are arranged in parallel to miniaturize the camera. A deep sea robot (DOLPHIN 3K) was fitted with this camera and used for the first sea test in Sagami Bay, Japan. The underwater visual information was clear enough to promise significant improvements in both deep sea surveying and safety. It was thus confirmed that the Super- HARP camera is very effective for underwater use.

  5. Diversity of the benthic macrofauna off northern Namibia from the shelf to the deep sea

    NASA Astrophysics Data System (ADS)

    Eisenbarth, Simone; Zettler, Michael L.

    2016-03-01

    In late summer 2011, shortly after an upwelling event, 17 stations ranging from 30 to 2513 m water depth have been sampled at 20° south in the northern part of the Benguela Current Large Marine Ecosystem (BCLME) for the investigation of the benthic macrofauna. Sediments of this area are dominated by silt. At the time of sampling, oxygen conditions on the shelf were poor (between 0.42 and 0.68 ml l- 1) but not hypoxic. Below 400 m, however, concentrations rose steadily up to 5.28 ml l- 1. Macrozoobenthic communities along this depth gradient are described, revealing among others the community structure for the continental margin area and the deep sea off northern Namibia for the first time. Cluster analysis revealed 5 different communities along the depth gradient with three shelf communities, one continental margin community and one deep-sea community. All in all, 314 different taxa were found with polychaetes being the most abundant group. Diversity index (Shannon) was lowest for the shallow water community with 2.21 and highest for the deep-sea community with 4.79, showing a clear trend with increasing water depth. Species richness, however, reached its maximum with 187 taxa along the continental margin between 400 and 1300 m water depth. Dominant species for each community are named with the two Cumacea, Iphinoeafricana and Upselaspis caparti, being characteristic for the shallow water community. On the shelf, we found surprisingly high biomass values (23-123 g m- 2), mainly caused by polychaetes, the bivalve Sinupharus galatheae and the gastropod Nassarius vinctus. In terms of composition, the remaining communities were dominated by polychaetes with members of the Paraonidae dominating along the continental margin where we also found surprisingly high abundances of the bivalves Pecten sp. and Dosinia sp. Spionid polychaetes and some representatives of the genus Paraonis were the most common organisms for the deep-sea community.

  6. Thermal Inactivation of a Deep-Sea Barophilic Bacterium, Isolate CNPT-3

    PubMed Central

    Yayanos, A. Aristides; Dietz, Allan S.

    1982-01-01

    The barophilic deep-sea bacterium, isolate CNPT-3, was inactivated by exposures to temperatures between 10 and 32°C at atmospheric pressure. Inactivation in samples from warmed cell suspensions was measured as the loss of colonyforming ability (CFA) at 10°C and 587 bars. At atmospheric pressure, there was a slow loss of CFA even at 10°C. The loss of CFA was rapid above 20°C and only slightly affected by high pressures. The first-order rate constants for thermal inactivation fit the Arrhenius equation with an activation energy of 43 kcal (ca. 179.9 kJ)/mol. Light microscopy and scanning transmission electron microscopy revealed morphological changes due to warming of the cells. The changes ensued the loss of CFA. The results supported the hypothesis from an earlier work that indigenous (autochthonous) deep-sea bacteria from cold deep seas are both barophilic and psychrophilic. If ultimately sustained, these characteristics may be useful in designing experiments to assess the relative importance of the autochthonous and allochthonous bacteria in the deep sea. The data were used to evaluate how barophilic bacteria may have been missed in many investigations because of warming of the cells during sample retrieval from the sea or during cultivation in the laboratory. The evaluation revealed the need for temperature and pressure data during retrieval of samples and cultivation in the laboratory. Most deep-ocean microbiology may be possible with thermally insulated equipment for retrieval from the sea and with high-pressure vessels for laboratory incubations. Images PMID:16346041

  7. Deep-sea bioluminescence blooms after dense water formation at the ocean surface.

    PubMed

    Tamburini, Christian; Canals, Miquel; Durrieu de Madron, Xavier; Houpert, Loïc; Lefèvre, Dominique; Martini, Séverine; D'Ortenzio, Fabrizio; Robert, Anne; Testor, Pierre; Aguilar, Juan Antonio; Samarai, Imen Al; Albert, Arnaud; André, Michel; Anghinolfi, Marco; Anton, Gisela; Anvar, Shebli; Ardid, Miguel; Jesus, Ana Carolina Assis; Astraatmadja, Tri L; Aubert, Jean-Jacques; Baret, Bruny; Basa, Stéphane; Bertin, Vincent; Biagi, Simone; Bigi, Armando; Bigongiari, Ciro; Bogazzi, Claudio; Bou-Cabo, Manuel; Bouhou, Boutayeb; Bouwhuis, Mieke C; Brunner, Jurgen; Busto, José; Camarena, Francisco; Capone, Antonio; Cârloganu, Christina; Carminati, Giada; Carr, John; Cecchini, Stefano; Charif, Ziad; Charvis, Philippe; Chiarusi, Tommaso; Circella, Marco; Coniglione, Rosa; Costantini, Heide; Coyle, Paschal; Curtil, Christian; Decowski, Patrick; Dekeyser, Ivan; Deschamps, Anne; Donzaud, Corinne; Dornic, Damien; Dorosti, Hasankiadeh Q; Drouhin, Doriane; Eberl, Thomas; Emanuele, Umberto; Ernenwein, Jean-Pierre; Escoffier, Stéphanie; Fermani, Paolo; Ferri, Marcelino; Flaminio, Vincenzo; Folger, Florian; Fritsch, Ulf; Fuda, Jean-Luc; Galatà, Salvatore; Gay, Pascal; Giacomelli, Giorgio; Giordano, Valentina; Gómez-González, Juan-Pablo; Graf, Kay; Guillard, Goulven; Halladjian, Garadeb; Hallewell, Gregory; van Haren, Hans; Hartman, Joris; Heijboer, Aart J; Hello, Yann; Hernández-Rey, Juan Jose; Herold, Bjoern; Hößl, Jurgen; Hsu, Ching-Cheng; de Jong, Marteen; Kadler, Matthias; Kalekin, Oleg; Kappes, Alexander; Katz, Uli; Kavatsyuk, Oksana; Kooijman, Paul; Kopper, Claudio; Kouchner, Antoine; Kreykenbohm, Ingo; Kulikovskiy, Vladimir; Lahmann, Robert; Lamare, Patrick; Larosa, Giuseppina; Lattuada, Dario; Lim, Gordon; Presti, Domenico Lo; Loehner, Herbert; Loucatos, Sotiris; Mangano, Salvatore; Marcelin, Michel; Margiotta, Annarita; Martinez-Mora, Juan Antonio; Meli, Athina; Montaruli, Teresa; Moscoso, Luciano; Motz, Holger; Neff, Max; Nezri, Emma Nuel; Palioselitis, Dimitris; Păvălaş, Gabriela E; Payet, Kevin; Payre, Patrice; Petrovic, Jelena; Piattelli, Paolo; Picot-Clemente, Nicolas; Popa, Vlad; Pradier, Thierry; Presani, Eleonora; Racca, Chantal; Reed, Corey; Riccobene, Giorgio; Richardt, Carsten; Richter, Roland; Rivière, Colas; Roensch, Kathrin; Rostovtsev, Andrei; Ruiz-Rivas, Joaquin; Rujoiu, Marius; Russo, Valerio G; Salesa, Francisco; Sánchez-Losa, Augustin; Sapienza, Piera; Schöck, Friederike; Schuller, Jean-Pierre; Schussler, Fabian; Shanidze, Rezo; Simeone, Francesco; Spies, Andreas; Spurio, Maurizio; Steijger, Jos J M; Stolarczyk, Thierry; Taiuti, Mauro G F; Toscano, Simona; Vallage, Bertrand; Van Elewyck, Véronique; Vannoni, Giulia; Vecchi, Manuela; Vernin, Pascal; Wijnker, Guus; Wilms, Jorn; de Wolf, Els; Yepes, Harold; Zaborov, Dmitry; De Dios Zornoza, Juan; Zúñiga, Juan

    2013-01-01

    The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in the properties of deep waters. Such changes are triggered by the winter cooling and evaporation experienced by the upper ocean layer in the Gulf of Lion that leads to the formation and subsequent sinking of dense water through a process known as "open-sea convection". It episodically renews the deep water of the study area and conveys fresh organic matter that fuels the deep ecosystems. Luminous bacteria most likely are the main contributors to the observed deep-sea bioluminescence blooms. Our observations demonstrate a consistent and rapid connection between deep open-sea convection and bathypelagic biological activity, as expressed by bioluminescence. In a setting where dense water formation events are likely to decline under global warming scenarios enhancing ocean stratification, in situ observatories become essential as environmental sentinels for the monitoring and understanding of deep-sea ecosystem shifts.

  8. Deep-Sea Bioluminescence Blooms after Dense Water Formation at the Ocean Surface

    PubMed Central

    Tamburini, Christian; Canals, Miquel; Durrieu de Madron, Xavier; Houpert, Loïc; Lefèvre, Dominique; Martini, Séverine; D'Ortenzio, Fabrizio; Robert, Anne; Testor, Pierre; Aguilar, Juan Antonio; Samarai, Imen Al; Albert, Arnaud; André, Michel; Anghinolfi, Marco; Anton, Gisela; Anvar, Shebli; Ardid, Miguel; Jesus, Ana Carolina Assis; Astraatmadja, Tri L.; Aubert, Jean-Jacques; Baret, Bruny; Basa, Stéphane; Bertin, Vincent; Biagi, Simone; Bigi, Armando; Bigongiari, Ciro; Bogazzi, Claudio; Bou-Cabo, Manuel; Bouhou, Boutayeb; Bouwhuis, Mieke C.; Brunner, Jurgen; Busto, José; Camarena, Francisco; Capone, Antonio; Cârloganu, Christina; Carminati, Giada; Carr, John; Cecchini, Stefano; Charif, Ziad; Charvis, Philippe; Chiarusi, Tommaso; Circella, Marco; Coniglione, Rosa; Costantini, Heide; Coyle, Paschal; Curtil, Christian; Decowski, Patrick; Dekeyser, Ivan; Deschamps, Anne; Donzaud, Corinne; Dornic, Damien; Dorosti, Hasankiadeh Q.; Drouhin, Doriane; Eberl, Thomas; Emanuele, Umberto; Ernenwein, Jean-Pierre; Escoffier, Stéphanie; Fermani, Paolo; Ferri, Marcelino; Flaminio, Vincenzo; Folger, Florian; Fritsch, Ulf; Fuda, Jean-Luc; Galatà, Salvatore; Gay, Pascal; Giacomelli, Giorgio; Giordano, Valentina; Gómez-González, Juan-Pablo; Graf, Kay; Guillard, Goulven; Halladjian, Garadeb; Hallewell, Gregory; van Haren, Hans; Hartman, Joris; Heijboer, Aart J.; Hello, Yann; Hernández-Rey, Juan Jose; Herold, Bjoern; Hößl, Jurgen; Hsu, Ching-Cheng; de Jong, Marteen; Kadler, Matthias; Kalekin, Oleg; Kappes, Alexander; Katz, Uli; Kavatsyuk, Oksana; Kooijman, Paul; Kopper, Claudio; Kouchner, Antoine; Kreykenbohm, Ingo; Kulikovskiy, Vladimir; Lahmann, Robert; Lamare, Patrick; Larosa, Giuseppina; Lattuada, Dario; Lim, Gordon; Presti, Domenico Lo; Loehner, Herbert; Loucatos, Sotiris; Mangano, Salvatore; Marcelin, Michel; Margiotta, Annarita; Martinez-Mora, Juan Antonio; Meli, Athina; Montaruli, Teresa; Motz, Holger; Neff, Max; Nezri, Emma nuel; Palioselitis, Dimitris; Păvălaş, Gabriela E.; Payet, Kevin; Payre, Patrice; Petrovic, Jelena; Piattelli, Paolo; Picot-Clemente, Nicolas; Popa, Vlad; Pradier, Thierry; Presani, Eleonora; Racca, Chantal; Reed, Corey; Riccobene, Giorgio; Richardt, Carsten; Richter, Roland; Rivière, Colas; Roensch, Kathrin; Rostovtsev, Andrei; Ruiz-Rivas, Joaquin; Rujoiu, Marius; Russo, Valerio G.; Salesa, Francisco; Sánchez-Losa, Augustin; Sapienza, Piera; Schöck, Friederike; Schuller, Jean-Pierre; Schussler, Fabian; Shanidze, Rezo; Simeone, Francesco; Spies, Andreas; Spurio, Maurizio; Steijger, Jos J. M.; Stolarczyk, Thierry; Taiuti, Mauro G. F.; Toscano, Simona; Vallage, Bertrand; Van Elewyck, Véronique; Vannoni, Giulia; Vecchi, Manuela; Vernin, Pascal; Wijnker, Guus; Wilms, Jorn; de Wolf, Els; Yepes, Harold; Zaborov, Dmitry; De Dios Zornoza, Juan; Zúñiga, Juan

    2013-01-01

    The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in the properties of deep waters. Such changes are triggered by the winter cooling and evaporation experienced by the upper ocean layer in the Gulf of Lion that leads to the formation and subsequent sinking of dense water through a process known as “open-sea convection”. It episodically renews the deep water of the study area and conveys fresh organic matter that fuels the deep ecosystems. Luminous bacteria most likely are the main contributors to the observed deep-sea bioluminescence blooms. Our observations demonstrate a consistent and rapid connection between deep open-sea convection and bathypelagic biological activity, as expressed by bioluminescence. In a setting where dense water formation events are likely to decline under global warming scenarios enhancing ocean stratification, in situ observatories become essential as environmental sentinels for the monitoring and understanding of deep-sea ecosystem shifts. PMID:23874425

  9. Population structure of deep-sea chemolithoautotrophs: identification of phenotypic and genotypic correlations

    NASA Astrophysics Data System (ADS)

    Mino, S.; Nakagawa, S.; Sawabe, T.; Miyazaki, J.; Makita, H.; Nunoura, T.; Yamamoto, M.; Takai, K.

    2012-12-01

    Deep-sea hydrothermal fields are areas on the seafloor of high biological productivity fueled primarily by microbial chemosynthesis. Chemolithoautotrophic Epsilonproteobacteria and Persephonella with an ability to utilize inorganic substrates such as elemental sulfur and hydrogen are important members in wide range of temperature conditions in deep-sea hydrothermal vents. However, little is known about their population genetic structure such as intraspecific genetic diversity, distribution pattern, and phenotypic characteristics. Previously, using genetic approach based on multi-locus sequence analysis (MLSA), we clarified that Epsilonproteobacteria Group A, B, F, and Persephonella populations were geographically separated, and Epsilonproteobacteria appeared to diverge by mutation rather than recombination. Contrary to genetic evidence for allopatric segregation in deep-sea chemoautotrophs, however, phenotypic evidence has never been found. In addition, analyzing such a phenotypic characteristic may lead to a better understanding of the interactions microbes have with their environment. In this study, we present a metabolomic approach based on matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) to reveal phenotypic biogeographical discrimination. We demonstrated the whole-cell MALDI-TOF MS method on Epsilonproteobacteria and Persephonella populations. These chemoautotrophic strains used in this study were isolated from chimney structures, vent fluids, and hydrothermal sediments. These hydrothermal samples were collected from geographically separated hydrothermal areas of the South Mariana Trough, Okinawa Trough and Central Indian Ridge. Based on mass peaks (signal/noise >10) within the m/z range of 2000-14000, phenotypic analysis was carried out by cluster analysis. The result of phenotypic analysis was compared with the genotypic clusters. The whole-cell MALDI-TOF MS revealed that Persephonella population was identified to

  10. Trophic ecology of deep-sea Asteroidea (Echinodermata) from eastern Canada

    NASA Astrophysics Data System (ADS)

    Gale, Katie S. P.; Hamel, Jean-François; Mercier, Annie

    2013-10-01

    Asteroids (sea stars) can be important predators in benthic communities and are often present in ecologically important and vulnerable deep-sea coral and sponge habitats. However, explicit studies on the trophic ecology of deep-sea asteroids are rare. We investigated the diets of seven species of deep-sea asteroid from the bathyal zone of Newfoundland and Labrador, eastern Canada. A multifaceted approach including live animal observations, stomach content analysis, and stable isotope analysis revealed the asteroids to be either top predators of megafauna or secondary consumers (mud ingesters, infaunal predators, and suspension feeders). The stable isotope signatures of Ceramaster granularis, Hippasteria phrygiana, and Mediaster bairdi are characteristic of high-level predators, having δ15N values 4.4‰ (more than one trophic level) above Ctenodiscus crispatus, Leptychaster arcticus, Novodinia americana, and Zoroaster fulgens. We present strong evidence that corals and sponges are common food items for two of the predatory species, C. granularis and H. phrygiana. During laboratory feeding trials, live H. phrygiana fed on several species of soft coral and C. granularis fed on sponges. Stomach content analysis of wild-caught individuals revealed sclerites from sea pens (e.g. Pennatula sp.) in the stomachs of both asteroid species; H. phrygiana also contained sclerites from at least two other species of octocoral and siliceous sponge spicules were present in the stomachs of C. granularis. The stomach contents of the secondary consumers contained a range of invertebrate material. Leptychaster arcticus and Ctenodiscus crispatus feed infaunally on bulk sediment and molluscs, Zoroaster fulgens is a generalist infaunal predator, and the brisingid Novodinia americana is a specialist suspension feeder on benthopelagic crustaceans. This study provides a foundation for understanding the ecological roles of bathyal asteroids, and suggests that some species may have the

  11. Search for microaustralites in deep-sea sediments less than 20,000 years old

    NASA Technical Reports Server (NTRS)

    Glass, B. P.; Wu, Jiquan

    1992-01-01

    Several authors have proposed that australites fell less than 20,000 years ago. We searched for microtektites in the tops of 46 deep-sea cores and were unable to find evidence for a microtektite layer less than 20,000 years old. Either the australite fall was not accompanied by microtektites, or the strewnfield did not extend into the area searched, or the australites fell about 0.77 Ma ago as indicated by their radiometric ages.

  12. Measurement of cosmic ray produced Mn-53 in deep sea metallic spherules

    NASA Technical Reports Server (NTRS)

    Nishiizumi, K.; Brownlee, D. E.

    1980-01-01

    Cosmic ray originated Mn-53 nuclides were measured in deep sea metallic spherules by neutron activation analysis. The spherules may be fused micrometeoroids or ablation droplets from larger objects; the low activities of Mn-53 may indicate its evaporation loss resulting from the heating in the earth's atmosphere or short exposure age. The Mn-53 nuclide is now being measured in chondritic spherules, and Be-10 and Cl-36 concentrations are determined in individual spherules using ion counting methods.

  13. Deep-Sea Trench Microbiology Down to 10.9 Kilometers Below the Surface

    NASA Astrophysics Data System (ADS)

    Bartlett, D. H.

    2012-12-01

    Deep-sea trenches, extending to more than 10.9 km below the sea surface, are among the most remote and infrequently sampled habitats. As a result a global perspective of microbial diversity and adaptation is lacking in these extreme settings. I will present the results of studies of deep-sea trench microbes collected in the Puerto Rico Trench (PRT), Tonga Trench, New Britain Trench and Mariana Trench. The samples collected include sediment, seawater and animals in baited traps. The analyses to be described include microbial community activity and viability measurements as a function of hydrostatic pressure, microbial culturing at high pressure under various physiological conditions, phylogenetics and metagenome and single-cell genome characterizations. Most of the results to date stem from samples recovered from the PRT. The deep-sea PRT Trench microbes have more in common at the species level with other deep-sea microbial communities previously characterized in the Pacific Ocean and the Mediterranean Sea than with the microbial populations above them in shallow waters. They also harbor larger genomes with more genes assigned to signal transduction, transcription, replication, recombination and repair and inorganic ion transport. The overrepresented transporters in the PRT metagenome include di- and tri-carboxylate transporters that correspond to the prevailing catabolic processes such as butanoate, glyoxylate and dicarboxylate metabolism. A surprisingly high abundance of sulfatases for the degradation of sulfated polysaccharides were also present in the PRT. But, perhaps the most dramatic adaptational feature of the PRT microbes is heavy metal resistance, as reflected in the high numbers of metal efflux systems present. Single-cell genomics approaches have proven particularly useful for placing PRT metagenomic data into context.

  14. Climatic forcing of Quaternary deep-sea benthic communities in the North Pacific Ocean

    USGS Publications Warehouse

    Yasuhara, Moriaki; Hunt, G.; Cronin, T. M.; Hokanishi, N.; Kawahata, H.; Tsujimoto, Akira; Ishitake, M.

    2012-01-01

    There is growing evidence that changes in deep-sea benthic ecosystems are modulated by climate changes, but most evidence to date comes from the North Atlantic Ocean. Here we analyze new ostracod and published foraminiferal records for the last 250,000 years on Shatsky Rise in the North Pacific Ocean. Using linear models, we evaluate statistically the ability of environmental drivers (temperature, productivity, and seasonality of productivity) to predict changes in faunal diversity, abundance, and composition. These microfossil data show glacial-interglacial shifts in overall abundances and species diversities that are low during glacial intervals and high during interglacials. These patterns replicate those previously documented in the North Atlantic Ocean, suggesting that the climatic forcing of the deep-sea ecosystem is widespread, and possibly global in nature. However, these results also reveal differences with prior studies that probably reflect the isolated nature of Shatsky Rise as a remote oceanic plateau. Ostracod assemblages on Shatsky Rise are highly endemic but of low diversity, consistent with the limited dispersal potential of these animals. Benthic foraminifera, by contrast, have much greater dispersal ability and their assemblages at Shatsky Rise show diversities typical for deep-sea faunas in other regions. Statistical analyses also reveal ostracod-foraminferal differences in relationships between environmental drivers and biotic change. Rarefied diversity is best explained as a hump-shaped function of surface productivity in ostracods, but as having a weak and positive relationship with temperature in foraminifera. Abundance shows a positive relationship with both productivity and seasonality of productivity in foraminifera, and a hump-shaped relationship with productivity in ostracods. Finally, species composition in ostracods is influenced by both temperature and productivity, but only a temperature effect is evident in foraminifera. Though

  15. The geomicrobiology of iron in deep-sea hydrothermal plumes (Invited)

    NASA Astrophysics Data System (ADS)

    Dick, G.; Li, M.; Toner, B. M.; Cron-Kamermans, B.; Baker, B. J.; Breier, J. A.; Sheik, C. S.

    2013-12-01

    Deep-sea hydrothermal vents are a significant source of iron and manganese to the oceans. Microorganisms in deep-sea hydrothermal plumes can influence the form and oceanic fate of vent-derived iron and manganese in several ways, including catalyzing the formation of iron and manganese oxides as well as binding and stabilizing iron with microbially-produced organic carbon. Although the potential role of organic ligands in dispersal of iron from vents is now well established, the nature and source of this organic matter is unknown. Here we present metagenomic, metatranscriptomic, and geochemical insights into the geomicrobiology of iron in deep-sea hydrothermal plumes of the Guaymas Basin (Gulf of California) and Mid-Cayman Rise (Caribbean). In the Guaymas Basin, genes involved in cellular iron uptake pathways, especially those involving siderophores, are among the most highly expressed genes in the plume microbial community. The nature of these microbial iron transporters, taken together with the low concentration of dissolved iron and abundance of particulate iron (mainly maghemite, lepidocrocite, and hematite) in the plume, indicates that iron minerals are the target for this microbial scavenging and uptake. All major Guaymas plume populations, including widespread methanotrophs, lithotrophs, and a particle-associated heterotroph, participate in iron uptake. At the Mid-Cayman Rise, an abundant plume population of Methylophaga has a cluster of genes involved in siderophore production and uptake that are expressed in the plume. These genes are not present in the genomes of other closely-related Methylophaga. Our findings indicate that the mobilization and cellular uptake of iron is a major process in deep-sea hydrothermal plume microbial communities and suggest new mechanisms for generating Fe-C complexes. This 'microbial iron pump' could represent an important yet previously overlooked mode of converting hydrothermal iron into bioavailable forms that can be

  16. Draft Genome Sequence of Pseudomonas pachastrellae Strain CCUG 46540T, a Deep-Sea Bacterium

    PubMed Central

    2017-01-01

    ABSTRACT Pseudomonas pachastrellae strain CCUG 46540T (KMM 330T) was isolated from a deep-sea sponge specimen collected in the Philippine Sea at a depth of 750 m. The draft genome has an estimated size of 4.0 Mb, exhibits a G+C content of 61.2 mol%, and is predicted to encode 3,592 proteins, including pathways for the degradation of aromatic compounds. PMID:28385850

  17. Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments.

    PubMed

    Hoffmann, Katy; Hassenrück, Christiane; Salman-Carvalho, Verena; Holtappels, Moritz; Bienhold, Christina

    2017-01-01

    Benthic deep-sea communities are largely dependent on particle flux from surface waters. In the Arctic Ocean, environmental changes occur more rapidly than in other ocean regions, and have major effects on the export of organic matter to the deep sea. Because bacteria constitute the majority of deep-sea benthic biomass and influence global element cycles, it is important to better understand how changes in organic matter input will affect bacterial communities at the Arctic seafloor. In a multidisciplinary ex situ experiment, benthic bacterial deep-sea communities from the Long-Term Ecological Research Observatory HAUSGARTEN were supplemented with different types of habitat-related detritus (chitin, Arctic algae) and incubated for 23 days under in situ conditions. Chitin addition caused strong changes in community activity, while community structure remained similar to unfed control incubations. In contrast, the addition of phytodetritus resulted in strong changes in community composition, accompanied by increased community activity, indicating the need for adaptation in these treatments. High-throughput sequencing of the 16S rRNA gene and 16S rRNA revealed distinct taxonomic groups of potentially fast-growing, opportunistic bacteria in the different detritus treatments. Compared to the unfed control, Colwelliaceae, Psychromonadaceae, and Oceanospirillaceae increased in relative abundance in the chitin treatment, whereas Flavobacteriaceae, Marinilabiaceae, and Pseudoalteromonadaceae increased in the phytodetritus treatments. Hence, these groups may constitute indicator taxa for the different organic matter sources at this study site. In summary, differences in community structure and in the uptake and remineralization of carbon in the different treatments suggest an effect of organic matter quality on bacterial diversity as well as on carbon turnover at the seafloor, an important feedback mechanism to be considered in future climate change scenarios.

  18. Nd isotopes in deep-sea corals in the North-eastern Atlantic

    NASA Astrophysics Data System (ADS)

    Copard, Kevin; Colin, Christophe; Douville, Eric; Freiwald, Andre; Gudmundsson, Gudmundur; De Mol, Ben; Frank, Norbert

    2010-09-01

    Neodymium (Nd) concentrations and isotopic signatures of living and fossil deep-sea coral species Lophelia pertusa, Desmophyllum dianthus and Madrepora oculata from the northeast Atlantic Ocean have been investigated in order to test the ability of deep-sea corals to reconstruct the seawater Nd isotopic signature and past changes of ocean circulation in the eastern North Atlantic. Small quantities of Nd—less than 45 ng/g—are incorporated into the aragonite skeleton of living deep-sea corals that dwell at upper intermediate depths throughout the Northeast Atlantic. Rigorous cleaning techniques are needed in order to avoid Nd contamination from manganese-oxide and iron hydroxide coatings. Moreover, Nd isotopic compositions have been measured using thermal ionization mass spectrometry (TIMS) by Nd-oxide method. Our data indicate that the isotopic signatures of modern corals are similar to those of adjacent water masses, implying that deep-sea corals can serve as an archive of the seawater Nd isotopic compositions in the past. The first results from few fully-cleaned fossils corals collected within the Porcupine Seabight and the southwest Rockall Bank reveal significantly higher ɛNd for corals dated between 150 ± 40 and 3060 ± 90 yrs than those of the living corals located in similar areas. This suggests rapid hydrological variations along the eastern margin of the North Atlantic Ocean at intermediate water depth with higher contribution of the Mediterranean Overflow Waters (MOW) or other temperate Atlantic mid-depth water masses (ENACW or NAC) in the past.

  19. Response of Bacterial Communities to Different Detritus Compositions in Arctic Deep-Sea Sediments

    PubMed Central

    Hoffmann, Katy; Hassenrück, Christiane; Salman-Carvalho, Verena; Holtappels, Moritz; Bienhold, Christina

    2017-01-01

    Benthic deep-sea communities are largely dependent on particle flux from surface waters. In the Arctic Ocean, environmental changes occur more rapidly than in other ocean regions, and have major effects on the export of organic matter to the deep sea. Because bacteria constitute the majority of deep-sea benthic biomass and influence global element cycles, it is important to better understand how changes in organic matter input will affect bacterial communities at the Arctic seafloor. In a multidisciplinary ex situ experiment, benthic bacterial deep-sea communities from the Long-Term Ecological Research Observatory HAUSGARTEN were supplemented with different types of habitat-related detritus (chitin, Arctic algae) and incubated for 23 days under in situ conditions. Chitin addition caused strong changes in community activity, while community structure remained similar to unfed control incubations. In contrast, the addition of phytodetritus resulted in strong changes in community composition, accompanied by increased community activity, indicating the need for adaptation in these treatments. High-throughput sequencing of the 16S rRNA gene and 16S rRNA revealed distinct taxonomic groups of potentially fast-growing, opportunistic bacteria in the different detritus treatments. Compared to the unfed control, Colwelliaceae, Psychromonadaceae, and Oceanospirillaceae increased in relative abundance in the chitin treatment, whereas Flavobacteriaceae, Marinilabiaceae, and Pseudoalteromonadaceae increased in the phytodetritus treatments. Hence, these groups may constitute indicator taxa for the different organic matter sources at this study site. In summary, differences in community structure and in the uptake and remineralization of carbon in the different treatments suggest an effect of organic matter quality on bacterial diversity as well as on carbon turnover at the seafloor, an important feedback mechanism to be considered in future climate change scenarios. PMID:28286496

  20. Dispersal, environmental niches and oceanic-scale turnover in deep-sea bivalves.

    PubMed

    McClain, Craig R; Stegen, James C; Hurlbert, Allen H

    2012-05-22

    Patterns of beta-diversity or distance decay at oceanic scales are completely unknown for deep-sea communities. Even when appropriate data exist, methodological problems have made it difficult to discern the relative roles of environmental filtering and dispersal limitation for generating faunal turnover patterns. Here, we combine a spatially extensive dataset on deep-sea bivalves with a model incorporating ecological dynamics and shared evolutionary history to quantify the effects of environmental filtering and dispersal limitation. Both the model and empirical data are used to relate functional, taxonomic and phylogenetic similarity between communities to environmental and spatial distances separating them for 270 sites across the Atlantic Ocean. This study represents the first ocean-wide analysis examining distance decay as a function of a broad suite of explanatory variables. We find that both strong environmental filtering and dispersal limitation drive turnover in taxonomic, functional and phylogenetic composition in deep-sea bivalves, explaining 26 per cent, 34 per cent and 9 per cent of the variation, respectively. This contrasts with previous suggestions that dispersal is not limiting in broad-scale biogeographic and biodiversity patterning in marine systems. However, rates of decay in similarity with environmental distance were eightfold to 44-fold steeper than with spatial distance. Energy availability is the most influential environmental variable evaluated, accounting for 3.9 per cent, 9.4 per cent and 22.3 per cent of the variation in functional, phylogenetic and taxonomic similarity, respectively. Comparing empirical patterns with process-based theoretical predictions provided quantitative estimates of dispersal limitation and niche breadth, indicating that 95 per cent of deep-sea bivalve propagules will be able to persist in environments that deviate from their optimum by up to 2.1 g m(-2) yr(-1) and typically disperse 749 km from their natal site.

  1. How can we identify and communicate the ecological value of deep-sea ecosystem services?

    PubMed

    Jobstvogt, Niels; Townsend, Michael; Witte, Ursula; Hanley, Nick

    2014-01-01

    Submarine canyons are considered biodiversity hotspots which have been identified for their important roles in connecting the deep sea with shallower waters. To date, a huge gap exists between the high importance that scientists associate with deep-sea ecosystem services and the communication of this knowledge to decision makers and to the wider public, who remain largely ignorant of the importance of these services. The connectivity and complexity of marine ecosystems makes knowledge transfer very challenging, and new communication tools are necessary to increase understanding of ecological values beyond the science community. We show how the Ecosystem Principles Approach, a method that explains the importance of ocean processes via easily understandable ecological principles, might overcome this challenge for deep-sea ecosystem services. Scientists were asked to help develop a list of clear and concise ecosystem principles for the functioning of submarine canyons through a Delphi process to facilitate future transfers of ecological knowledge. These ecosystem principles describe ecosystem processes, link such processes to ecosystem services, and provide spatial and temporal information on the connectivity between deep and shallow waters. They also elucidate unique characteristics of submarine canyons. Our Ecosystem Principles Approach was successful in integrating ecological information into the ecosystem services assessment process. It therefore has a high potential to be the next step towards a wider implementation of ecological values in marine planning. We believe that successful communication of ecological knowledge is the key to a wider public support for ocean conservation, and that this endeavour has to be driven by scientists in their own interest as major deep-sea stakeholders.

  2. Dispersal Patterns of Pleistocene Sands on the North Atlantic Deep-Sea Floor.

    PubMed

    Hubert, J F

    1962-05-04

    Glauconitic, quartzose sands previously modified on the continental shelf from feldspathic glacial detritus were transported through submarine canyons onto the Hudson deep-sea fan, the Hatteras abyssal plain, and the western and central Sohm abyssal plain. These feldspar-poor, quartzose sands contrast with highly feldspathic sands derived directly from a glacial source and probably transported through the Newfoundland abyssal gap onto the eastern and southern Sohm abyssal plain.

  3. How Can We Identify and Communicate the Ecological Value of Deep-Sea Ecosystem Services?

    PubMed Central

    Jobstvogt, Niels; Townsend, Michael; Witte, Ursula; Hanley, Nick

    2014-01-01

    Submarine canyons are considered biodiversity hotspots which have been identified for their important roles in connecting the deep sea with shallower waters. To date, a huge gap exists between the high importance that scientists associate with deep-sea ecosystem services and the communication of this knowledge to decision makers and to the wider public, who remain largely ignorant of the importance of these services. The connectivity and complexity of marine ecosystems makes knowledge transfer very challenging, and new communication tools are necessary to increase understanding of ecological values beyond the science community. We show how the Ecosystem Principles Approach, a method that explains the importance of ocean processes via easily understandable ecological principles, might overcome this challenge for deep-sea ecosystem services. Scientists were asked to help develop a list of clear and concise ecosystem principles for the functioning of submarine canyons through a Delphi process to facilitate future transfers of ecological knowledge. These ecosystem principles describe ecosystem processes, link such processes to ecosystem services, and provide spatial and temporal information on the connectivity between deep and shallow waters. They also elucidate unique characteristics of submarine canyons. Our Ecosystem Principles Approach was successful in integrating ecological information into the ecosystem services assessment process. It therefore has a high potential to be the next step towards a wider implementation of ecological values in marine planning. We believe that successful communication of ecological knowledge is the key to a wider public support for ocean conservation, and that this endeavour has to be driven by scientists in their own interest as major deep-sea stakeholders. PMID:25055119

  4. Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria

    PubMed Central

    Mills, Dominic C.; Jervis, Adrian J.; Abouelhadid, Sherif; Yates, Laura E.; Cuccui, Jon; Linton, Dennis; Wren, Brendan W.

    2016-01-01

    Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria. More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems. Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus. We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed they were able to functionally complement the C. jejuni OTase, CjPglB . The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities. Additionally a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesised by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end. This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes. PMID:26610891

  5. Biochemical Function and Ecological Significance of Novel Bacterial Lipids in Deep-Sea Procaryotes

    PubMed Central

    DeLong, Edward F.; Yayanos, A. Aristides

    1986-01-01

    The fatty acid composition of the membrane lipids in 11 deep-sea bacterial isolates was determined. The fatty acids observed were typical of marine vibrios except for the presence of large amounts of long-chain polyunsaturated fatty acids (PUFAs). These long-chain PUFAs were previously thought to be absent in procaryotes, with the notable exception of a single marine Flexibacter sp. In three barophilic strains tested at 2°C, there was a general increase in the relative amount of PUFAs as pressure was increased from a low growth pressure towards the optimal growth pressure. In Vibrio marinus MP-1, a psychrophilic strain, PUFAs were found to increase as a function of decreasing temperature at constant atmospheric pressure. These results suggest the involvement of PUFAs in the maintenance of optimal membrane fluidity and function over environmentally relevant temperatures and pressures. Furthermore, since these lipids are essential nutrients for higher taxa and are found in large amounts in the lipids of deep-sea vertebrates and invertebrates, an important, specific role for deep-sea bacteria in abyssal food webs is implicated. PMID:16347037

  6. 'Lophenteropneust' hypothesis refuted by collection and photos of new deep-sea hemichordates.

    PubMed

    Holland, Nicholas D; Clague, David A; Gordon, Dennis P; Gebruk, Andrey; Pawson, David L; Vecchione, Michael

    2005-03-17

    The deep ocean is home to a group of broad-collared hemichordates--the so-called 'lophenteropneusts'--that have been photographed gliding on the sea floor but have not previously been collected. It has been claimed that these worms have collar tentacles and blend morphological features of the two main hemichordate body plans, namely the tentacle-less enteropneusts and the tentacle-bearing pterobranchs. Consequently, lophenteropneusts have been invoked as missing links to suggest that the former evolved into the latter. The most significant aspect of the lophenteropneust hypothesis is its prediction that the fundamental body plan within a basal phylum of deuterostomes was enteropneust-like. The assumption of such an ancestral state influences ideas about the evolution of the vertebrates from the invertebrates. Here we report on the first collected specimen of a broad-collared, deep-sea enteropneust and describe it as a new family, genus and species. The collar, although disproportionately broad, lacks tentacles. In addition, we find no evidence of tentacles in the available deep-sea photographs (published and unpublished) of broad-collared enteropneusts, including those formerly designated as lophenteropneusts. Thus, the lophenteropneust hypothesis was based on misinterpretation of deep-sea photographs of low quality and should no longer be used to support the idea that the enteropneust body plan is basal within the phylum Hemichordata.

  7. Molecular phylogeny of hemichordata, with updated status of deep-sea enteropneusts.

    PubMed

    Cannon, Johanna T; Rychel, Amanda L; Eccleston, Heather; Halanych, Kenneth M; Swalla, Billie J

    2009-07-01

    Hemichordates have occupied a central role in hypotheses of deuterostome and early chordate evolution. However, surprisingly little is understood about evolution within hemichordates, including hemichordate ancestral characters that may relate to other deuterostome taxa. Previous phylogenetic studies suggested that enteropneust worms are either monophyletic (based on 28S rDNA) or paraphyletic (based on 18S rDNA). Here, we expand the number of hemichordate taxa used in phylogenetic analyses for 18S rDNA data and employ more quickly evolving mitochondrial gene sequences. Novel data from an undescribed deep-sea enteropneust species similar to Torquarator bullocki and a Gulf Stream tornaria larva suggest that these taxa are closely allied to or possibly within Ptychoderidae. Saxipendium coronatum, another deep-sea species commonly called the spaghetti worm, is shown to be a member of Harrimaniidae. Recognition of these deep-sea lineages as distinct families calls into question features used in hemichordate taxonomy. In the new analyses, enteropneusts fall into two distinct monophyletic clades, with the colonial pterobranchs sister to Harrimaniidae, similar to earlier published 18S results. These results indicate that colonial pterobranchs may have evolved from a solitary acorn worm-like hemichordate ancestor. If true, pterobranchs would be unlikely to represent the deuterostome ancestral form as has been suggested by many traditional theories of deuterostome evolution.

  8. Macroecological drivers of archaea and bacteria in benthic deep-sea ecosystems

    PubMed Central

    Danovaro, Roberto; Molari, Massimiliano; Corinaldesi, Cinzia; Dell’Anno, Antonio

    2016-01-01

    Bacteria and archaea dominate the biomass of benthic deep-sea ecosystems at all latitudes, playing a crucial role in global biogeochemical cycles, but their macroscale patterns and macroecological drivers are still largely unknown. We show the results of the most extensive field study conducted so far to investigate patterns and drivers of the distribution and structure of benthic prokaryote assemblages from 228 samples collected at latitudes comprising 34°N to 79°N, and from ca. 400- to 5570-m depth. We provide evidence that, in deep-sea ecosystems, benthic bacterial and archaeal abundances significantly increase from middle to high latitudes, with patterns more pronounced for archaea, and particularly for Marine Group I Thaumarchaeota. Our results also reveal that different microbial components show varying sensitivities to changes in temperature conditions and food supply. We conclude that climate change will primarily affect deep-sea benthic archaea, with important consequences on global biogeochemical cycles, particularly at high latitudes. PMID:27386507

  9. Is the deep-sea crab Chaceon affinis able to induce a thermal stress response?

    PubMed

    Mestre, Nélia C; Cottin, Delphine; Bettencourt, Raul; Colaço, Ana; Correia, Sérgio P C; Shillito, Bruce; Thatje, Sven; Ravaux, Juliette

    2015-03-01

    Fluctuations in the stress level of an organism are expressed in behavioural and molecular changes that can affect its ecology and survival. Our knowledge of thermal adaptations in deep-sea organisms is very limited, and this study investigates the critical thermal maximum (CTmax) and the heat-shock response (HSR) in the deep-sea crab Chaceon affinis commonly found in waters of the North East Atlantic. A mild but significant HSR in C. affinis was noted and one of the lowest CTmax known amongst Crustacea was revealed (27.5 °C at 0.1 MPa; 28.5 °C at 10 MPa). The thermal sensitivity of this species appears to be reduced at in situ pressure (10 MPa), given the slightly higher CTmax and the significant 3-fold induction of stress genes hsp70 form 1 and hsp70 form 2. Although C. affinis deep-sea habitat is characterized by overall low temperature this species appears to have retained its ability to induce a HSR. This capability may be linked with C. affinis' occasional exploitation of warmer and thermally instable hydrothermal vent fields, where it has been found foraging for food.

  10. Endemicity of the cosmopolitan mesophilic chemolithoautotroph Sulfurimonas at deep-sea hydrothermal vents.

    PubMed

    Mino, Sayaka; Nakagawa, Satoshi; Makita, Hiroko; Toki, Tomohiro; Miyazaki, Junichi; Sievert, Stefan M; Polz, Martin F; Inagaki, Fumio; Godfroy, Anne; Kato, Shingo; Watanabe, Hiromi; Nunoura, Takuro; Nakamura, Koichi; Imachi, Hiroyuki; Watsuji, Tomo-O; Kojima, Shigeaki; Takai, Ken; Sawabe, Tomoo

    2017-04-01

    Rich animal and microbial communities have been found at deep-sea hydrothermal vents. Although the biogeography of vent macrofauna is well understood, the corresponding knowledge about vent microbial biogeography is lacking. Here, we apply the multilocus sequence analysis (MLSA) to assess the genetic variation of 109 Sulfurimonas strains with ⩾98% 16S rRNA gene sequence similarity, which were isolated from four different geographical regions (Okinawa Trough (OT), Mariana Volcanic Arc and Trough (MVAT), Central Indian Ridge (CIR) and Mid-Atlantic Ridge (MAR)). Sequence typing based on 11 protein-coding genes revealed high genetic variation, including some allele types that are widespread within regions, resulting in 102 nucleotide sequence types (STs). This genetic variation was predominantly due to mutation rather than recombination. Phylogenetic analysis of the 11 concatenated genes showed a clear geographical isolation corresponding to the hydrothermal regions they originated from, suggesting limited dispersal. Genetic differentiation among Sulfurimonas populations was primarily influenced by geographical distance rather than gas composition of vent fluid or habitat, although in situ environmental conditions of each microhabitat could not be examined. Nevertheless, Sulfurimonas may possess a higher dispersal capability compared with deep-sea hydrothermal vent thermophiles. This is the first report on MLSA of deep-sea hydrothermal vent Epsilonproteobacteria, which is indicative of allopatric speciation.

  11. A novel fluorescent protein from the deep-sea anemone Cribrinopsis japonica (Anthozoa: Actiniaria)

    PubMed Central

    Tsutsui, Kenta; Shimada, Eriko; Ogawa, Tomohisa; Tsuruwaka, Yusuke

    2016-01-01

    A fluorescent protein was identified and cloned from the deep-sea anemone Cribrinopsis japonica. Bioluminescence and fluorescence expression were examined by direct observations of live specimens and RNA-Seq analysis. Both approaches revealed a novel green fluorescent protein in the tentacles of the anemone, but bioluminescence was not observed. Behavioural observations revealed that a blue light excited the fluorescence in the tentacles, and initiated a behavioural response whereby the fluorescent tentacles became fully exposed to the blue light. The excitation and emission peaks of C. japonica’s fluorescent protein were at 500 and 510 nm, respectively, which were greener than those reported in homologs. Furthermore, this protein was highly tolerant of increased temperatures and repeated freeze–thaw treatments. The current study presents an example of fluorescence in a deep-sea cnidarian, demonstrating that fluorescent proteins could have important roles, regardless of the presence or absence of strong sunlight. It also demonstrates that this deep-sea fluorescent protein has unique characteristics, including high stability, perhaps as an adaptation to the extreme environment. PMID:27002644

  12. Molecular phylogeny in mytilids supports the wooden steps to deep-sea vents hypothesis.

    PubMed

    Samadi, Sarah; Quéméré, Erwan; Lorion, Julien; Tillier, Annie; von Cosel, Rudo; Lopez, Philippe; Cruaud, Corinne; Couloux, Arnaud; Boisselier-Dubayle, Marie-Catherine

    2007-05-01

    Molecular data were used to study the diversity of mytilids associated with sunken-woods sampled in the Solomon Islands and discuss the 'wooden steps to deep-sea vent' hypothesis proposed by Distel et al. First, COI data used in a barcoding approach confirm the presence of four distinct species. Analyses of the 18S rDNA and COI dataset then confirmed that these sunken-wood mytilids belonged to a monophyletic group including all species from deep-sea reducing environments. Finally, we analyzed the relationships within this monophyletic group that include the Bathymodiolinae using a COI dataset and a combined analysis of mitochondrial COI and ND4 genes and nuclear rDNA 18S and 28S. Our study supported the 'wooden steps to deep-sea vent' hypothesis: one of the sunken-wood species had a basal position within the Bathymodiolionae, and all described vent and seep mussels included in our analyses were derived taxa within Bathymodiolinae.

  13. Bacterial community diversity of the deep-sea octocoral Paramuricea placomus

    USGS Publications Warehouse

    Kellogg, Christina A.; Ross, Steve W.; Brooke, Sandra D.

    2016-01-01

    Compared to tropical corals, much less is known about deep-sea coral biology and ecology. Although the microbial communities of some deep-sea corals have been described, this is the first study to characterize the bacterial community associated with the deep-sea octocoral, Paramuricea placomus. Samples from five colonies of P. placomus were collected from Baltimore Canyon (379–382 m depth) in the Atlantic Ocean off the east coast of the United States of America. DNA was extracted from the coral samples and 16S rRNA gene amplicons were pyrosequenced using V4-V5 primers. Three samples sequenced deeply (>4,000 sequences each) and were further analyzed. The dominant microbial phylum was Proteobacteria, but other major phyla included Firmicutes and Planctomycetes. A conserved community of bacterial taxa held in common across the three P. placomuscolonies was identified, comprising 68–90% of the total bacterial community depending on the coral individual. The bacterial community of P. placomusdoes not appear to include the genus Endozoicomonas, which has been found previously to be the dominant bacterial associate in several temperate and tropical gorgonians. Inferred functionality suggests the possibility of nitrogen cycling by the core bacterial community.

  14. Bathymetric limits of chondrichthyans in the deep sea: A re-evaluation

    NASA Astrophysics Data System (ADS)

    Musick, J. A.; Cotton, C. F.

    2015-05-01

    Chondrichthyans are largely absent in abyssal (>3000 m) habitats in most regions of the world ocean and are uncommon below 2000 m. The deeper-living chondrichthyans include certain rajids, squaliforms and holocephalans. Several hypotheses have been erected to explain the absence of chondrichthyans from the abyss. These are mostly based on energetics: deep-sea food webs are impoverished due to their distance from primary production, and chondrichthyans, occupying the highest trophic levels, cannot be supported due to entropy among trophic levels. We examined this hypothesis by comparing trophic levels, calculated from dietary data, of deep-sea chondrichthyans with those of deep-sea teleosts. Chondrichthyans were mostly above trophic level 4, whereas all the teleosts examined were below that level. Both small and medium squaloids, as well as sharks and skates of large size, feed on fishes, cephalopods and scavenged prey, and thus occupy the highest trophic levels in bathydemersal fish communities. In addition, whereas teleosts and chondrichthyans both store lipids in their livers to support long periods of fasting, chondrichthyans must devote much of their liver lipids to maintain neutral buoyancy. Consequently teleosts with swim bladders are better adapted to survive in the abyss where food sources are sparse and unpredictable. The potential prey field for both chondrichthyans and teleosts declines in biomass and diversity with depth, but teleosts have more flexibility in their feeding mechanisms and food habits, and occupy abyssal trophic guilds for which chondrichthyans are ill adapted.

  15. Gulf of Mexico Deep-Sea Coral Ecosystem Studies, 2008-2011

    USGS Publications Warehouse

    Kellogg, Christina A.

    2009-01-01

    Most people are familiar with tropical coral reefs, located in warm, well-illuminated, shallow waters. However, corals also exist hundreds and even thousands of meters below the ocean surface, where it is cold and completely dark. These deep-sea corals, also known as cold-water corals, have become a topic of interest due to conservation concerns over the impacts of trawling, exploration for oil and gas, and climate change. Although the existence of these corals has been known since the 1800s, our understanding of their distribution, ecology, and biology is limited due to the technical difficulties of conducting deep-sea research. DISCOVRE (DIversity, Systematics, and COnnectivity of Vulnerable Reef Ecosystems) is a new U.S. Geological Survey (USGS) program focused on deep-water coral ecosystems in the Gulf of Mexico. This integrated, multidisciplinary, international effort investigates a variety of topics related to unique and fragile deep-sea coral ecosystems from the microscopic level to the ecosystem level, including components of microbiology, population genetics, paleoecology, food webs, taxonomy, community ecology, physical oceanography, and mapping.

  16. Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti.

    PubMed

    Tavormina, Patricia L; Kellermann, Matthias Y; Antony, Chakkiath Paul; Tocheva, Elitza I; Dalleska, Nathan F; Jensen, Ashley J; Valentine, David L; Hinrichs, Kai-Uwe; Jensen, Grant J; Dubilier, Nicole; Orphan, Victoria J

    2017-01-01

    In the deep ocean, the conversion of methane into derived carbon and energy drives the establishment of diverse faunal communities. Yet specific biological mechanisms underlying the introduction of methane-derived carbon into the food web remain poorly described, due to a lack of cultured representative deep-sea methanotrophic prokaryotes. Here, the response of the deep-sea aerobic methanotroph Methyloprofundus sedimenti to methane starvation and recovery was characterized. By combining lipid analysis, RNA analysis, and electron cryotomography, it was shown that M. sedimenti undergoes discrete cellular shifts in response to methane starvation, including changes in headgroup-specific fatty acid saturation levels, and reductions in cytoplasmic storage granules. Methane starvation is associated with a significant increase in the abundance of gene transcripts pertinent to methane oxidation. Methane reintroduction to starved cells stimulates a rapid, transient extracellular accumulation of methanol, revealing a way in which methane-derived carbon may be routed to community members. This study provides new understanding of methanotrophic responses to methane starvation and recovery, and lays the initial groundwork to develop Methyloprofundus as a model chemosynthesizing bacterium from the deep sea.

  17. Functional analysis of N-linking oligosaccharyl transferase enzymes encoded by deep-sea vent proteobacteria.

    PubMed

    Mills, Dominic C; Jervis, Adrian J; Abouelhadid, Sherif; Yates, Laura E; Cuccui, Jon; Linton, Dennis; Wren, Brendan W

    2016-04-01

    Bacterial N-linking oligosaccharyl transferases (OTase enzymes) transfer lipid-linked glycans to selected proteins in the periplasm and were first described in the intestinal pathogen Campylobacter jejuni, a member of the ε-proteobacteria-subdivision of bacteria. More recently, orthologues from other ε-proteobacterial Campylobacter and Helicobacter species and a δ-proteobacterium, Desulfovibrio desulfuricans, have been described, suggesting that these two subdivisions of bacteria may be a source of further N-linked protein glycosylation systems. Whole-genome sequencing of both ε- and δ-proteobacteria from deep-sea vent habitats, a rich source of species from these subdivisions, revealed putative ORFs encoding OTase enzymes and associated adjacent glycosyltransferases similar to the C. jejuni N-linked glycosylation locus. We expressed putative OTase ORFs from the deep-sea vent species Nitratiruptor tergarcus, Sulfurovum lithotrophicum and Deferribacter desulfuricans in Escherichia coli and showed that they were able to functionally complement the C. jejuni OTase, CjPglB. The enzymes were shown to possess relaxed glycan specificity, transferring diverse glycan structures and demonstrated different glycosylation sequon specificities. Additionally, a permissive D. desulfuricans acceptor protein was identified, and we provide evidence that the N-linked glycan synthesized by N. tergarcus and S. lithotrophicum contains an acetylated sugar at the reducing end. This work demonstrates that deep-sea vent bacteria encode functional N-glycosylation machineries and are a potential source of biotechnologically important OTase enzymes.

  18. The Specific and Exclusive Microbiome of the Deep-Sea Bone-Eating Snail, Rubyspira osteovora.

    PubMed

    Aronson, H S; Zellmer, A J; Goffredi, S K

    2016-12-15

    Rubyspira osteovora is an unusual deep-sea snail from Monterey Canyon, CA. This group has only been found on decomposing whales and is thought to use bone as a novel source of nutrition. This study characterized the gut microbiome of R. osteovora, compared to the surrounding environment, as well as to other deep-sea snails with more typical diets. Analysis of 16S rRNA gene sequences revealed that R. osteovora digestive tissues hosted a much lower bacterial diversity (average Shannon index of 1.9; n = 12), compared to environmental samples (average Shannon index of 4.4; n = 2) and were dominated by two bacterial genera: Mycoplasma and Psychromonas (comprising up to 56% and 42% average total recovered sequences, respectively). These two bacteria, along with Psychrilyobacter sp. (∼16% average recovered sequences), accounted for between 43-92% of the total recovered sequences in individual snail digestive systems, with other OTUs present at much lower proportions. The relative abundance of these three groups remained similar over six years of sampling (collection date was not shown to be a significant predictor of community structure), suggesting a long-term association. Further, these bacterial genera were either not present (Mycoplasma and Psychromonas), or at very low abundance (< 0.04% for Psychrilyobacter), in environmental samples and other deep-sea gastropods, supporting the uniqueness of the R. osteovora gut microbiome.

  19. Genomic characterization of symbiotic mycoplasmas from the stomach of deep-sea isopod bathynomus sp.

    PubMed

    Wang, Yong; Huang, Jiao-Mei; Wang, Shao-Lu; Gao, Zhao-Ming; Zhang, Ai-Qun; Danchin, Antoine; He, Li-Sheng

    2016-09-01

    Deep-sea isopod scavengers such as Bathynomus sp. are able to live in nutrient-poor environments, which is likely attributable to the presence of symbiotic microbes in their stomach. In this study we recovered two draft genomes of mycoplasmas, Bg1 and Bg2, from the metagenomes of the stomach contents and stomach sac of a Bathynomus sp. sample from the South China Sea (depth of 898 m). Phylogenetic trees revealed a considerable genetic distance to other mycoplasma species for Bg1 and Bg2. Compared with terrestrial symbiotic mycoplasmas, the Bg1 and Bg2 genomes were enriched with genes encoding phosphoenolpyruvate-dependent phosphotransferase systems (PTSs) and sodium-driven symporters responsible for the uptake of sugars, amino acids and other carbohydrates. The genome of mycoplasma Bg1 contained sialic acid lyase and transporter genes, potentially enabling the bacteria to attach to the stomach sac and obtain organic carbons from various cell walls. Both of the mycoplasma genomes contained multiple copies of genes related to proteolysis and oligosaccharide degradation, which may help the host survive in low-nutrient conditions. The discovery of the different types of mycoplasma bacteria in the stomach of this deep-sea isopod affords insights into symbiotic model of deep-sea animals and genomic plasticity of mycoplasma bacteria.

  20. Hydroxylated PAHs in bile of deep-sea fish. Relationship with xenobiotic metabolizing enzymes

    SciTech Connect

    Escartin, E.; Porte, C.

    1999-08-15

    Polycyclic aromatic hydrocarbon (PAH) pollution in deep-sea environments has been assessed by measuring bile PAH metabolites in deep-sea fish. Five species from the NW Mediterranean were selected for the study: Coryphaenoides guentheri, Lepidion lepidion, Mora moro, Bathypterois mediterraneus, and Alepocephalus rostratus. Bile crude samples were directly analyzed by HPLC-fluorescence at the excitation/emission wavelengths of benzo[a]pyrene. Differences among sampling sites were recorded, which suggests that coastal discharges of contaminants may reach these remote areas. Subsequently, a number of bile samples were hydrolyzed and analyzed by gas chromatography--mass spectrometry (GC-MS) for the determination of individual PAHs. 1-Pyrenol and 2-phenylphenol were among the most abundant compounds detected. The results obtained confirm the long-range transport of PAHs to deep-sea environments, subsequent exposure of fish inhabiting those remote areas, and its ability to metabolize and excrete them through the bile. The data also describe hepatic enzymes (cytochrome P450 and glutathione S-transferases) that appear to be as catalytically efficient as those in shallow water species.

  1. Antifouling potentials of eight deep-sea-derived fungi from the South China Sea.

    PubMed

    Zhang, Xiao-Yong; Xu, Xin-Ya; Peng, Jiang; Ma, Chun-Feng; Nong, Xu-Hua; Bao, Jie; Zhang, Guang-Zhao; Qi, Shu-Hua

    2014-04-01

    Marine-derived microbial secondary metabolites are promising potential sources of nontoxic antifouling agents. The search for environmentally friendly and low-toxic antifouling components guided us to investigate the antifouling potentials of eight novel fungal isolates from deep-sea sediments of the South China Sea. Sixteen crude ethyl acetate extracts of the eight fungal isolates showed distinct antibacterial activity against three marine bacteria (Loktanella hongkongensis UST950701-009, Micrococcus luteus UST950701-006 and Pseudoalteromonas piscida UST010620-005), or significant antilarval activity against larval settlement of bryozoan Bugula neritina. Furthermore, the extract of Aspergillus westerdijkiae DFFSCS013 displayed strong antifouling activity in a field trial lasting 4 months. By further bioassay-guided isolation, five antifouling alkaloids including brevianamide F, circumdatin F and L, notoamide C, and 5-chlorosclerotiamide were isolated from the extract of A. westerdijkiae DFFSCS013. This is the first report about the antifouling potentials of metabolites of the deep-sea-derived fungi from the South China Sea, and the first stage towards the development of non- or low-toxic antifouling agents from deep-sea-derived fungi.

  2. Evidence of a Putative Deep Sea Specific Microbiome in Marine Sponges

    PubMed Central

    Kennedy, Jonathan; Flemer, Burkhardt; Jackson, Stephen A.; Morrissey, John P.; O'Gara, Ferghal; Dobson, Alan D. W.

    2014-01-01

    The microbiota of four individual deep water sponges, Lissodendoryx diversichela, Poecillastra compressa, Inflatella pellicula, and Stelletta normani, together with surrounding seawater were analysed by pyrosequencing of a region of the 16S rRNA gene common to Bacteria and Archaea. Due to sampling constraints at depths below 700 m duplicate samples were not collected. The microbial communities of L. diversichela, P. compressa and I. pellicula were typical of low microbial abundance (LMA) sponges while S. normani had a community more typical of high microbial abundance (HMA) sponges. Analysis of the deep sea sponge microbiota revealed that the three LMA-like sponges shared a set of abundant OTUs that were distinct from those associated with sponges from shallow waters. Comparison of the pyrosequencing data with that from shallow water sponges revealed that the microbial communities of all sponges analysed have similar archaeal populations but that the bacterial populations of the deep sea sponges were distinct. Further analysis of the common and abundant OTUs from the three LMA-like sponges placed them within the groups of ammonia oxidising Archaea (Thaumarchaeota) and sulphur oxidising γ-Proteobacteria (Chromatiales). Reads from these two groups made up over 70% of all 16S rRNA genes detected from the three LMA-like sponge samples, providing evidence of a putative common microbial assemblage associated with deep sea LMA sponges. PMID:24670421

  3. Evidence of a putative deep sea specific microbiome in marine sponges.

    PubMed

    Kennedy, Jonathan; Flemer, Burkhardt; Jackson, Stephen A; Morrissey, John P; O'Gara, Fergal; O'Gara, Ferghal; Dobson, Alan D W

    2014-01-01

    The microbiota of four individual deep water sponges, Lissodendoryx diversichela, Poecillastra compressa, Inflatella pellicula, and Stelletta normani, together with surrounding seawater were analysed by pyrosequencing of a region of the 16S rRNA gene common to Bacteria and Archaea. Due to sampling constraints at depths below 700 m duplicate samples were not collected. The microbial communities of L. diversichela, P. compressa and I. pellicula were typical of low microbial abundance (LMA) sponges while S. normani had a community more typical of high microbial abundance (HMA) sponges. Analysis of the deep sea sponge microbiota revealed that the three LMA-like sponges shared a set of abundant OTUs that were distinct from those associated with sponges from shallow waters. Comparison of the pyrosequencing data with that from shallow water sponges revealed that the microbial communities of all sponges analysed have similar archaeal populations but that the bacterial populations of the deep sea sponges were distinct. Further analysis of the common and abundant OTUs from the three LMA-like sponges placed them within the groups of ammonia oxidising Archaea (Thaumarchaeota) and sulphur oxidising γ-Proteobacteria (Chromatiales). Reads from these two groups made up over 70% of all 16S rRNA genes detected from the three LMA-like sponge samples, providing evidence of a putative common microbial assemblage associated with deep sea LMA sponges.

  4. Bacterial community diversity of the deep-sea octocoral Paramuricea placomus

    PubMed Central

    Ross, Steve W.; Brooke, Sandra D.

    2016-01-01

    Compared to tropical corals, much less is known about deep-sea coral biology and ecology. Although the microbial communities of some deep-sea corals have been described, this is the first study to characterize the bacterial community associated with the deep-sea octocoral, Paramuricea placomus. Samples from five colonies of P. placomus were collected from Baltimore Canyon (379–382 m depth) in the Atlantic Ocean off the east coast of the United States of America. DNA was extracted from the coral samples and 16S rRNA gene amplicons were pyrosequenced using V4-V5 primers. Three samples sequenced deeply (>4,000 sequences each) and were further analyzed. The dominant microbial phylum was Proteobacteria, but other major phyla included Firmicutes and Planctomycetes. A conserved community of bacterial taxa held in common across the three P. placomus colonies was identified, comprising 68–90% of the total bacterial community depending on the coral individual. The bacterial community of P. placomus does not appear to include the genus Endozoicomonas, which has been found previously to be the dominant bacterial associate in several temperate and tropical gorgonians. Inferred functionality suggests the possibility of nitrogen cycling by the core bacterial community. PMID:27703865

  5. Deep-sea hydrothermal vent bacteria related to human pathogenic Vibrio species

    PubMed Central

    Hasan, Nur A.; Grim, Christopher J.; Lipp, Erin K.; Rivera, Irma N. G.; Chun, Jongsik; Haley, Bradd J.; Taviani, Elisa; Choi, Seon Young; Hoq, Mozammel; Munk, A. Christine; Brettin, Thomas S.; Bruce, David; Challacombe, Jean F.; Detter, J. Chris; Han, Cliff S.; Eisen, Jonathan A.; Huq, Anwar; Colwell, Rita R.

    2015-01-01

    Vibrio species are both ubiquitous and abundant in marine coastal waters, estuaries, ocean sediment, and aquaculture settings worldwide. We report here the isolation, characterization, and genome sequence of a novel Vibrio species, Vibrio antiquarius, isolated from a mesophilic bacterial community associated with hydrothermal vents located along the East Pacific Rise, near the southwest coast of Mexico. Genomic and phenotypic analysis revealed V. antiquarius is closely related to pathogenic Vibrio species, namely Vibrio alginolyticus, Vibrio parahaemolyticus, Vibrio harveyi, and Vibrio vulnificus, but sufficiently divergent to warrant a separate species status. The V. antiquarius genome encodes genes and operons with ecological functions relevant to the environment conditions of the deep sea and also harbors factors known to be involved in human disease caused by freshwater, coastal, and brackish water vibrios. The presence of virulence factors in this deep-sea Vibrio species suggests a far more fundamental role of these factors for their bacterial host. Comparative genomics revealed a variety of genomic events that may have provided an important driving force in V. antiquarius evolution, facilitating response to environmental conditions of the deep sea. PMID:25964331

  6. [Deep-sea research ground for the study of living matter properties in extreme conditions].

    PubMed

    Polikarpov, G G

    2011-01-01

    The Black Sea hollow bottom is a promising research ground in the field of deep-sea radiochemoecology and exobiology. It has turned out to be at the intersection of the earth and cosmic scientific interests such as deep-sea marine radiochemoecology from the perspective of the study of extreme biogeocenological properties of the Earth biosphere and exobiology from the standpoint of the study of life phenomena (living matter) outside the Earth biosphere, i.e. on other planets and during hypothetical transfer of spores in the outer space. The potential of this ground is substantiated with the data published by the author and co-workers on accumulation of 90Sr, 137Cs and Pu isotopes with silts of bathyal pelo-contour, on the quality of deep-sea hydrogen sulphide waters (after their contact with air) for vital functions of planktonic and benthic aerobes, as well as the species composition of marine, freshwater and terrestrial plants grown from the spores collected from the bottom sediments of the Black Sea bathyal. Discussion was based on V.I. Vernadsky's ideas about the living matter and biosphere, which allowed conclusions about the biospheric and outer space role of the described phenomena.

  7. The detection of magnetotactic bacteria in deep sea sediments from the east Pacific Manganese Nodule Province.

    PubMed

    Dong, Yi; Li, Jinhua; Zhang, Wuchang; Zhang, Wenyan; Zhao, Yuan; Xiao, Tian; Wu, Long-Fei; Pan, Hongmiao

    2016-04-01

    Magnetotactic bacteria (MTB) are distributed ubiquitously in sediments from coastal environments to the deep sea. The Pacific Manganese Nodule Province contains numerous polymetallic nodules mainly composed of manganese, iron, cobalt, copper and nickel. In the present study we used Illumina MiSeq sequencing technology to assess the communities of putative MTB in deep sea surface sediments at nine stations in the east Pacific Manganese Nodule Province. A total of 402 sequence reads from MTB were classified into six operational taxonomic units (OTUs). Among these, OTU113 and OTU759 were affiliated with the genus Magnetospira, OTU2224 and OTU2794 were affiliated with the genus Magnetococcus and Magnetovibrio, respectively, OTU3017 had no known genus affiliation, and OTU2556 was most similar to Candidatus Magnetananas. Interestingly, OTU759 was widely distributed, occurring at all study sites. Magnetism measurements revealed that all sediments were dominated by low coercivity, non-interacting single domain magnetic minerals. Transmission electron microscopy confirmed that the magnetic minerals were magnetosomes. Our data suggest that diverse putative MTB are widely distributed in deep sea surface sediments from the east Pacific Manganese Nodule Province.

  8. Impact of Bottom Trawling on Deep-Sea Sediment Properties along the Flanks of a Submarine Canyon

    PubMed Central

    Martín, Jacobo; Puig, Pere; Masqué, Pere; Palanques, Albert; Sánchez-Gómez, Anabel

    2014-01-01

    The offshore displacement of commercial bottom trawling has raised concerns about the impact of this destructive fishing practice on the deep seafloor, which is in general characterized by lower resilience than shallow water regions. This study focuses on the flanks of La Fonera (or Palamós) submarine canyon in the Northwestern Mediterranean, where an intensive bottom trawl fishery has been active during several decades in the 400–800 m depth range. To explore the degree of alteration of surface sediments (0–50 cm depth) caused by this industrial activity, fishing grounds and control (untrawled) sites were sampled along the canyon flanks with an interface multicorer. Sediment cores were analyzed to obtain vertical profiles of sediment grain-size, dry bulk density, organic carbon content and concentration of the radionuclide 210Pb. At control sites, surface sediments presented sedimentological characteristics typical of slope depositional systems, including a topmost unit of unconsolidated and bioturbated material overlying sediments progressively compacted with depth, with consistently high 210Pb inventories and exponential decaying profiles of 210Pb concentrations. Sediment accumulation rates at these untrawled sites ranged from 0.3 to 1.0 cm y−1. Sediment properties at most trawled sites departed from control sites and the sampled cores were characterized by denser sediments with lower 210Pb surface concentrations and inventories that indicate widespread erosion of recent sediments caused by trawling gears. Other alterations of the physical sediment properties, including thorough mixing or grain-size sorting, as well as organic carbon impoverishment, were also visible at trawled sites. This work contributes to the growing realization of the capacity of bottom trawling to alter the physical properties of surface sediments and affect the seafloor integrity over large spatial scales of the deep-sea. PMID:25111298

  9. Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Neamphius huxleyi indicated by metagenomics

    PubMed Central

    Li, Zhi-Yong; Wang, Yue-Zhu; He, Li-Ming; Zheng, Hua-Jun

    2014-01-01

    The whole metabolism of a sponge holobiont and the respective contributions of prokaryotic and eukaryotic symbionts and their associations with the sponge host remain largely unclear. Meanwhile, compared with shallow water sponges, deep-sea sponges are rarely understood. Here we report the metagenomic exploration of deep-sea sponge Neamphius huxleyi at the whole community level. Metagenomic data showed phylogenetically diverse prokaryotes and eukaryotes in Neamphius huxleyi. MEGAN and gene enrichment analyses indicated different metabolic potentials of prokaryotic symbionts from eukaryotic symbionts, especially in nitrogen and carbon metabolisms, and their molecular interactions with the sponge host. These results supported the hypothesis that prokaryotic and eukaryotic symbionts have different ecological roles and relationships with sponge host. Moreover, vigorous denitrification, and CO2 fixation by chemoautotrophic prokaryotes were suggested for this deep-sea sponge. The study provided novel insights into the respective potentials of prokaryotic and eukaryotic symbionts and their associations with deep-sea sponge Neamphius huxleyi. PMID:24463735

  10. Metabolic profiles of prokaryotic and eukaryotic communities in deep-sea sponge Neamphius huxleyi [corrected]. indicated by metagenomics.

    PubMed

    Li, Zhi-Yong; Wang, Yue-Zhu; He, Li-Ming; Zheng, Hua-Jun

    2014-01-27

    The whole metabolism of a sponge holobiont and the respective contributions of prokaryotic and eukaryotic symbionts and their associations with the sponge host remain largely unclear. Meanwhile, compared with shallow water sponges, deep-sea sponges are rarely understood. Here we report the metagenomic exploration of deep-sea sponge Neamphius huxleyi [corrected] . at the whole community level. Metagenomic data showed phylogenetically diverse prokaryotes and eukaryotes in Neamphius huxleyi [corrected]. MEGAN and gene enrichment analyses indicated different metabolic potentials of prokaryotic symbionts from eukaryotic symbionts, especially in nitrogen and carbon metabolisms, and their molecular interactions with the sponge host. These results supported the hypothesis that prokaryotic and eukaryotic symbionts have different ecological roles and relationships with sponge host. Moreover, vigorous denitrification, and CO2 fixation by chemoautotrophic prokaryotes were suggested for this deep-sea sponge. The study provided novel insights into the respective potentials of prokaryotic and eukaryotic symbionts and their associations with deep-sea sponge Neamphius huxleyi [corrected].

  11. Seasonal changes in fish assemblage structure at a shallow seamount in the Gulf of California

    PubMed Central

    Klimley, A. Peter; Muhlia-Melo, Arturo; Morgan, Steven G.

    2016-01-01

    Seamounts have generally been identified as locations that can promote elevated productivity, biomass and predator biodiversity. These properties attract seamount-associated fisheries where elevated harvests can be obtained relative to surrounding areas. There exists large variation in the geological and oceanographic environment among the thousands of locations that fall within the broad definition of seamount. Global seamount surveys have revealed that not all seamounts are hotspots of biodiversity, and there remains a strong need to understand the mechanisms that underlie variation in species richness observed. We examined the process of fish species assembly at El Bajo Espiritu Santo (EBES) seamount in the Gulf of California over a five-year study period. To effectively quantify the relative abundance of fast-moving and schooling fishes in a ‘blue water’ habitat, we developed a simplified underwater visual census (UVC) methodology and analysis framework suitable for this setting and applicable to future studies in similar environments. We found correlations between seasonally changing community structure and variability in oceanographic conditions. Individual species responses to thermal habitat at EBES revealed three distinct assemblages, a ‘fall assemblage’ tracking warmer overall temperature, a ‘spring assemblage’ correlated with cooler temperature, and a ‘year-round assemblage’ with no significant response to temperature. Species richness was greatest in spring, when cool and warm water masses stratified the water column and a greater number of species from all three assemblages co-occurred. We discuss our findings in the context of potential mechanisms that could account for predator biodiversity at shallow seamounts. PMID:27651985

  12. Draft Genome Sequence of Deep-Sea Alteromonas sp. Strain V450 Isolated from the Marine Sponge Leiodermatium sp.

    PubMed Central

    Barrett, Nolan H.; McCarthy, Peter J.

    2017-01-01

    ABSTRACT The proteobacterium Alteromonas sp. strain V450 was isolated from the Atlantic deep-sea sponge Leiodermatium sp. Here, we report the draft genome sequence of this strain, with a genome size of approx. 4.39 Mb and a G+C content of 44.01%. The results will aid deep-sea microbial ecology, evolution, and sponge-microbe association studies. PMID:28153886

  13. Reproduction of deep-sea reef-building corals from the southwestern Atlantic

    NASA Astrophysics Data System (ADS)

    Pires, D. O.; Silva, J. C.; Bastos, N. D.

    2014-01-01

    The logistics of research on deep-sea organisms imposes restrictions on studies that require repetitive long-term collections. Studies on the reproduction of deep-water corals have commonly been made without appropriate temporal series. This study included Madrepora oculata, Solenosmilia variabilis, Lophelia pertusa, and Enallopsammia rostrata, which are among the primary deep-sea reef building corals off Brazil. Samples were collected during 13 consecutive months by the Campos Basin Deep-Sea Corals Assessment Project (R&D Center of the Brazilian Energy Company, Petrobras) in Campos Basin (CB) off Rio de Janeiro State through a remotely-operated-vehicle at approximately 600 m depth. Of every monthly sampling campaign, an average of four to five colonies of all four species were investigated histologically. Colonies of both sexes were observed, indicating that all four species are gonochoric. For now, this appears to be the predominant reproductive pattern observed in corals in the area, as well as in deep-sea corals in general, where 80% of coral species are gonochoric. Although considered functionally gonochoric, M. oculata and L. pertusa presented a few colonies with different hermaphroditism patterns. E. rostrata and M. oculata presented continuous reproduction. Although fertile year-round, S. variabilis presents a reproductive peak between April and September (Autumn-Spring) in contrast with the seasonal reproduction recorded in the southwestern Pacific. L. pertusa had a seasonal reproductive peak, confirming previous observations of periodic reproduction in this species in the northeastern Atlantic. The possible spawning season of L. pertusa from CB concentrates between May and July (high frequency of mature gametes), while spawning occurs between January and March in the North Atlantic and between September and November in the Gulf of Mexico. Our results suggest that the studied species are broadcast spawners because no embryos or larvae were observed in any

  14. The snails' tale at deep-sea habitats in the Gulf of Cadiz (NE Atlantic)

    NASA Astrophysics Data System (ADS)

    Génio, L.; Warén, A.; Matos, F. L.; Cunha, M. R.

    2013-02-01

    Bridging the Atlantic and Mediterranean continental margins, the South Iberian region has recently been the focus for geological and biological investigations. The Gulf of Cadiz (GoC) encompasses a great variety of deep-sea habitats that harbour highly diverse biological communities. In this study, we describe the taxa composition of gastropod assemblages from deep-sea habitats in the GoC and analyse the species distributional patterns in relation to their dispersal capabilities and substrate availability. Distinct gastropod assemblages were found at mud volcanoes, carbonate and coral sites, and organic-falls. Overall, the GoC comprises a high diversity of gastropods that include 65 taxa representing 32 families, 48 genera and 30 named species. The highest number of taxa was found at the highly heterogeneous carbonate province in the middle slope (500-1500 m depth), and higher abundance of individuals was observed in Captain Arutyunov mud volcano, one of the most active sites found in the GoC. Faunal similarities were found with Mediterreanean cold-seeps (species- and genus-level) and other chemosynthetic environments in the Atlantic and Pacific Oceans (genus-level). Colonization experiments with organic substrata (wood and alfalfa grass) yielded high abundances of gastropod species. These organic inputs allowed the recruitment of local species but also of wood specialist taxa that were not known to occur in the GoC. Our results suggest that distribution of gastropod assemblages may be primarily determined by the occurrence of suitable habitats probably due to effect of the substrate type on feeding strategies and that larval development is not a limiting factor for colonization of the deep sea. However, the predominance of non-planktotrophy, and especially lecithotrophy, suggests that the trade-off between a more limited dispersal capability and the higher potential for self-recruitment may be favoured by the gastropod species inhabiting reducing environments and

  15. The snails' tale in deep-sea habitats in the Gulf of Cadiz (NE Atlantic)

    NASA Astrophysics Data System (ADS)

    Génio, L.; Warén, A.; Matos, F. L.; Cunha, M. R.

    2013-07-01

    Bridging the Atlantic and Mediterranean continental margins, the South Iberian region has recently been the focus for geological and biological investigations. In this region, the Gulf of Cadiz (GoC) encompasses a great variety of deep-sea habitats that harbour highly diverse biological communities. In this study, we describe the composition of gastropod assemblages obtained from in situ colonization experiments and benthic sampling of deep-sea habitats in the GoC. Gastropod distributional patterns, such as bathymetric ranges, bathymetric turnover, affinity to substrate types and abundance-occupancy relationships, are analysed and interpreted in relation to their inferred dispersal capabilities and substrate availability. Overall, the GoC comprises a high diversity of gastropods (65 species), and distinct assemblages were found in typical sedimentary environments at mud volcanoes and in association with carbonate and coral samples or organic substrata. The number of taxa peaked at the Carbonate Province in the middle slope (600-1200 m depth), a highly heterogeneous area with numerous mud volcanoes, carbonate mounds and corals. Darwin (1100 m) and Captain Arutyunov (1300 m) mud volcanoes harboured the most species-rich and abundant gastropod assemblages, respectively. Colonization experiments with organic substrata (wood and alfalfa grass) also yielded diverse and abundant gastropod assemblages. These organic inputs allowed the recruitment of local species but mainly of wood specialist taxa that were not previously known from the GoC. Our results suggest that the distribution of gastropod assemblages may be primarily determined by the occurrence of suitable habitats, probably due to the effect of the substrate type on the structural complexity of the habitat and availability and diversity of adequate food sources. The type of larval development is apparently not a limiting factor for colonization of deep-sea habitats. However, the predominance of non

  16. Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments

    PubMed Central

    Heidelberg, John F.

    2016-01-01

    ABSTRACT The South Pacific Gyre (SPG) possesses the lowest rates of sedimentation, surface chlorophyll concentration, and primary productivity in the global oceans. As a direct result, deep-sea sediments are thin and contain small amounts of labile organic carbon. It was recently shown that the entire SPG sediment column is oxygenated and may be representative of up to a third of the global marine environment. To understand the microbial processes that contribute to the removal of the labile organic matter at the water-sediment interface, a sediment sample was collected and subjected to metagenomic sequencing and analyses. Analysis of nine partially reconstructed environmental genomes, which represent approximately one-third of the microbial community, revealed that the members of the SPG surface sediment microbial community are phylogenetically distinct from surface/upper-ocean organisms. These genomes represent a wide distribution of novel organisms, including deep-branching Alphaproteobacteria, two novel organisms within the Proteobacteria, and new members of the Nitrospirae, Nitrospinae, and candidate phylum NC10. These genomes contain evidence for microbially mediated metal (iron/manganese) oxidation and carbon fixation linked to nitrification. Additionally, despite hypothesized energy limitation, members of the SPG microbial community had motility and chemotaxis genes and possessed mechanisms for the degradation of high-molecular-weight organic matter. This study contributes to our understanding of the metabolic potential of microorganisms in deep-sea oligotrophic sediments and their impact on local carbon geochemistry. IMPORTANCE This research provides insight into the microbial metabolic potential of organisms inhabiting oxygenated deep-sea marine sediments. Current estimates suggest that these environments account for up to a third of the global marine sediment habitat. Nine novel deep-sea microbial genomes were reconstructed from a metagenomic data set

  17. Microbial community development in deep-sea hydrothermal vents in the Earth and the Enceladus (Invited)

    NASA Astrophysics Data System (ADS)

    Takai, K.; Shibuya, T.; Sekine, Y.; Russell, M. J.

    2013-12-01

    Over the past 35 years, researchers have explored seafloor deep-sea hydrothermal vent environments around the globe and studied a number of microbial ecosystems. Bioinformatics and interdisciplinary geochemistry-microbiology approaches have provided new ideas on the diversity and community composition of microbial life living in deep-sea vents. In particular, recent investigations have revealed that the community structure and productivity of chemolithotrophic microbial communities in the deep-sea hydrothermal environments are controlled primarily by variations in the geochemical composition of hydrothermal fluids. This was originally predicted by a thermodynamic calculation of energy yield potential of various chemolithotrophic metabolisms in a simulated hydrothermal mixing zone. The prediction has been finally justified by the relatively quantitative geomicrobiological characterizations in various deep-sea hydrothermal vent environments all over the world. Thus, there should be a possible principle that the thermodynamic estimation of chemolithotrophic energy yield potentials could predict the realistic chemolithotrophic living community in any of the deep-sea hydrothermal vent environments in this planet. In 2005, a spacecraft Cassini discovered a water vapour jet plume from the sole pole area of the Saturnian moon Enceladus. The chemical composition analyses of Cassini's mass spectrometer strongly suggested that the Enceladus could host certain extent of extraterrestrial ocean beneath the surface ice sheet and possible ocean-rock hydrothermal systems. In addition, a recent research has suggests that there is silica nanoparticles in Saturn's E-ring derived from the Enceladus plume. An experimental study simulating the reaction between chondritic material and alkaline seawater reveals that the formation of silica nanoparticles requires hydrothermal reaction at high temperatures. Based on these findings, we attempt to built a model of possible hydrothermal fluid

  18. Biodiversity of the Deep-Sea Benthic Fauna in the Sangihe-Talaud Region, Indonesia: Observations from the INDEX-SATAL 2010 Expedition

    NASA Astrophysics Data System (ADS)

    Herrera, S.; Munro, C.; Nganro, N.; Tunnicliffe, V.; Wirasantosa, S.; Sibert, E.; Hammond, S. R.; Bors, E.; Butterfield, D.; Holden, J. F.; Baker, E. T.; Sherrin, J.; Makarim, S.; Troa, R.; Shank, T. M.

    2010-12-01

    The benthic ecosystems found in the deep-sea promontories of Sangihe Talaud region were explored, between June and August 2010, using the ROV Little Hercules aboard the NOAA ship Okeanos Explorer. The Sangihe-Talaud region is part of the Coral Triangle (CT) an area known for harboring the most biodiverse shallow-water coral reefs in the world. Notwithstanding the significant research efforts that have been undertaken to catalog and protect the biodiversity of the CT prior this expedition, virtually nothing was known about the life inhabiting the deep sea. The high-resolution imagery obtained from the 27 ROV dives revealed remarkably high abundances and diversity of animal species, many of which appear to be novel. On hard bottom substrates, cold-water corals were the dominant sessile macrofauna, in terms of biomass, followed by glass sponges (Hexactinellida) and sea lilies (Crinoidea). The coral taxa observed in this area represent six large orders of cnidarians: antipatharians (black corals), scleractinians (stony corals), zoanthideans (gold corals), alcyonaceans (octocorals), pennatulaceans (sea pens), and anthoathecates (hydrocorals). Most sessile species, independently of their size class or taxonomic affiliation, harbor a wide variety of associated fauna. Brittle stars (Ophiuroidea), squat lobsters (Galatheoidea), shrimp (Caridea), amphipods (Amphipoda), anemones (Actinaria), zanthideans, barnacles (Cirripedia), hydroids (Hydrozoa) and worms (Polychaeta) are the animal groups most commonly found forming these associations. In contrast, soft bottom habitats were dominated by stalked sponges, sea pens, sea cucumbers (Holothuroidea) and brittle stars. Other conspicuous fauna include fish, hermit crabs (Paguridae), urchins (Echinoidea) and octopuses (Cephalopoda). The abundance of habitats generated by the high number of geological and biological features and depth ranges present in the deep coral triangle (e.g., ridges, seamounts, island margins, plains, and rock

  19. Sea-level and deep-sea-temperature variability over the past 5.3 million years.

    PubMed

    Rohling, E J; Foster, G L; Grant, K M; Marino, G; Roberts, A P; Tamisiea, M E; Williams, F

    2014-04-24

    Ice volume (and hence sea level) and deep-sea temperature are key measures of global climate change. Sea level has been documented using several independent methods over the past 0.5 million years (Myr). Older periods, however, lack such independent validation; all existing records are related to deep-sea oxygen isotope (δ(18)O) data that are influenced by processes unrelated to sea level. For deep-sea temperature, only one continuous high-resolution (Mg/Ca-based) record exists, with related sea-level estimates, spanning the past 1.5 Myr. Here we present a novel sea-level reconstruction, with associated estimates of deep-sea temperature, which independently validates the previous 0-1.5 Myr reconstruction and extends it back to 5.3 Myr ago. We find that deep-sea temperature and sea level generally decreased through time, but distinctly out of synchrony, which is remarkable given the importance of ice-albedo feedbacks on the radiative forcing of climate. In particular, we observe a large temporal offset during the onset of Plio-Pleistocene ice ages, between a marked cooling step at 2.73 Myr ago and the first major glaciation at 2.15 Myr ago. Last, we tentatively infer that ice sheets may have grown largest during glacials with more modest reductions in deep-sea temperature.

  20. Carbonate "clumped" isotope signatures in aragonitic scleractinian and calcitic gorgonian deep-sea corals

    NASA Astrophysics Data System (ADS)

    Kimball, Justine; Eagle, Robert; Dunbar, Robert

    2016-12-01

    Deep-sea corals are a potentially valuable archive of the temperature and ocean chemistry of intermediate and deep waters. Living in near-constant temperature, salinity, and pH and having amongst the slowest calcification rates observed in carbonate-precipitating biological organisms, deep-sea corals can provide valuable constraints on processes driving mineral equilibrium and disequilibrium isotope signatures. Here we report new data to further develop "clumped" isotopes as a paleothermometer in deep-sea corals as well as to investigate mineral-specific, taxon-specific, and growth-rate-related effects. Carbonate clumped isotope thermometry is based on measurements of the abundance of the doubly substituted isotopologue 13C18O16O2 in carbonate minerals, analyzed in CO2 gas liberated on phosphoric acid digestion of carbonates and reported as Δ47 values. We analyzed Δ47 in live-collected aragonitic scleractinian (Enallopsammia sp.) and high-Mg calcitic gorgonian (Isididae and Coralliidae) deep-sea corals and compared results to published data for other aragonitic scleractinian taxa. Measured Δ47 values were compared to in situ temperatures, and the relationship between Δ47 and temperature was determined for each group to investigate taxon-specific effects. We find that aragonitic scleractinian deep-sea corals exhibit higher values than high-Mg calcitic gorgonian corals and the two groups of coral produce statistically different relationships between Δ47-temperature calibrations. These data are significant in the interpretation of all carbonate clumped isotope calibration data as they show that distinct Δ47-temperature calibrations can be observed in different materials recovered from the same environment and analyzed using the same instrumentation, phosphoric acid composition, digestion temperature and technique, CO2 gas purification apparatus, and data handling. There are three possible explanations for the origin of these different calibrations. The offset

  1. The mortality and morbidity of deep sea fishermen sailing from Grimsby in one year1

    PubMed Central

    Moore, S. R. W.

    1969-01-01

    Moore, S. R. W. (1969).Brit. J. industr. Med.,26, 25-46. The mortality and morbidity of deep sea fishermen sailing from Grimsby in one year. The injuries, illnesses, and deaths of Grimsby deep sea fishermen in the year 1963 have been studied using the trawler log-book as the basic source of information. Additional information has been obtained from other sources. The numbers of man-days sailed by Grimsby deep sea fishermen, by age and rating in 1963, have been ascertained. From these, incapacity rates for the measurement of morbidity due to injury and illness, and the mortality rate, have been calculated. There were 14 deaths, six due to accidental causes and eight to natural causes, giving a mortality rate of 5·7 per 1,000 for Grimsby deep sea fishermen in 1963. In a year when there was no foundering or loss of Grimsby trawlers, the fatal accident rate of Grimsby trawlermen was more than twice that of fishermen of the United Kingdom, four times the rate for miners, and 40 times that for the manufacturing industries. The most common injuries were, in order of incidence, contusions of varying degrees of severity, infected lesions, sprains and strains, lacerations, and fractures. More than half (56·3%) of the trawlermen were incapacitated by their injuries. The highest rates of incapacity were caused by fractures, contusions, and infected lesions. The upper limb, especially the hands and fingers, was most often affected, resulting most commonly in infected lesions. Third hands, mates, deck hands, deck trimmers, and deck learners had the highest incapacity rates due to injury. Third hands are especially at risk to injury. Most injuries and two deaths caused by casualties to boats occurred in fires aboard trawlers. The most common illnesses suffered by trawlermen were gastrointestinal, respiratory, and skin diseases. Illness caused incapacity in 68·8% of the trawlermen affected. The greatest incapacity was due to gastrointestinal, cardiac, psychiatric, and

  2. Carbonate “clumped” isotope signatures in aragonitic scleractinian and calcitic gorgonian deep-sea corals

    DOE PAGES

    Kimball, Justine; Eagle, Robert; Dunbar, Robert

    2016-12-12

    Deep-sea corals are a potentially valuable archive of the temperature and ocean chemistry of intermediate and deep waters. Living in near-constant temperature, salinity, and pH and having amongst the slowest calcification rates observed in carbonate-precipitating biological organisms, deep-sea corals can provide valuable constraints on processes driving mineral equilibrium and disequilibrium isotope signatures. Here we report new data to further develop “clumped” isotopes as a paleothermometer in deep-sea corals as well as to investigate mineral-specific, taxon-specific, and growth-rate-related effects. Carbonate clumped isotope thermometry is based on measurements of the abundance of the doubly substituted isotopologue 13C18O16O2 in carbonate minerals, analyzed inmore » CO2 gas liberated on phosphoric acid digestion of carbonates and reported as Δ47 values. We analyzed Δ47 in live-collected aragonitic scleractinian (Enallopsammia sp.) and high-Mg calcitic gorgonian (Isididae and Coralliidae) deep-sea corals and compared results to published data for other aragonitic scleractinian taxa. Measured Δ47 values were compared to in situ temperatures, and the relationship between Δ47 and temperature was determined for each group to investigate taxon-specific effects. We find that aragonitic scleractinian deep-sea corals exhibit higher values than high-Mg calcitic gorgonian corals and the two groups of coral produce statistically different relationships between Δ47–temperature calibrations. These data are significant in the interpretation of all carbonate clumped isotope calibration data as they show that distinct Δ47–temperature calibrations can be observed in different materials recovered from the same environment and analyzed using the same instrumentation, phosphoric acid composition, digestion temperature and technique, CO2 gas purification apparatus, and data handling. There are three possible explanations for the origin of these different

  3. Carbonate "clumped" isotope signatures in aragonitic scleractinian and calcitic gorgonian deep-sea corals

    NASA Astrophysics Data System (ADS)

    Kimball, J.; Tripati, R. E.; Dunbar, R.

    2015-12-01

    Deep-sea corals are a potentially valuable archive of the temperature and ocean chemistry of intermediate and deep waters. Living in near constant temperature, salinity and pH, and having amongst the slowest calcification rates observed in carbonate-precipitating biological organisms, deep-sea corals can provide valuable constraints on processes driving mineral equilibrium and disequilibrium isotope signatures. Here we report new data to further develop "clumped" isotopes as a paleothermometer in deep-sea corals as well as to investigate mineral-specific, taxon-specific, and growth-rate related effects. Carbonate clumped isotope thermometry is based on measurements of the abundance of the doubly-substituted isotopologue 13C18O16O2 in carbonate minerals, analyzed in CO2 gas liberated on phosphoric acid digestion of carbonates and reported as Δ47 values. We analyzed Δ47 in live-collected aragonitic scleractinian (Enallopsammia sp.) and calcitic gorgonian (Isididae and Coralliidae) deep-sea corals, and compared results to published data for other aragonitic scleractinian taxa. Measured Δ47 values were compared to in situ temperatures and the relationship between Δ47 and temperature was determined for each group to investigate taxon-specific effects. We find that aragonitic scleractinian deep-sea corals exhibit higher values than calcitic gorgonian corals and the two groups of coral produce statistically different relationship between Δ47-temperature calibrations. These data are significant in the interpretation of all carbonate "clumped" isotope calibration data as they show that distinct Δ47-temperature calibrations can be observed in different materials recovered from the same environment and analyzed using the same instrumentation, phosphoric acid composition, digestion temperature and technique, CO2 gas purification apparatus, and data handling. There are three possible explanations for the origin of these different calibrations. The offset between the

  4. Oceanographic aspects of the Emperor Seamounts region

    SciTech Connect

    Roden, G.I.; Taft, B.A.; Ebbesmeyer, C.C.

    1982-11-20

    Effects of the Emperor Seamount Chain on the thermohaline structure and baroclinic flow are investigated on the basis of historical hydrographic data. The amplitudes of dynamic height perturbations are 3 to 5 times larger west than east of the chain. The intensity of the thermal fronts is stronger west than east of the seamounts; near the crest of the southern seamounts, strong east-west thermohaline fronts and a strong northward baroclinic flow are observed. The Kuroshio Extension west of the seamount chain is a well-defined meandering current, the axis of which generally lies between 33/sup 0/ and 36/sup 0/N. The available data indicate that the Kuroshio Extension turns northward and then flows eastward through the gaps of the seamount chain. East of the seamounts, the Kuroshio Extension widens threefold and appears to be poorly defined.

  5. Evidence for age and evolution of Corner seamounts and Great Meteor seamount chain from multibeam bathymetry

    NASA Technical Reports Server (NTRS)

    Tucholke, Brian E.; Smoot, N. Christian

    1990-01-01

    The morphology of the Corner and Cruiser seamounts is discussed and the apparent age of seamount geomorphic features that are thought to have formed at sea level is derived. High-resolution, multibeam bathymetry of the seamounts shows geomorphic features such as guyots and terraces. The pattern of volcanism is consistent with the sequential formation of the New England, Corner, and Great Meteor chain seamounts above the New England hotspot. However, Late Cretaceous and Cenozoic absolute motion of the African plate over the hotspot differs significantly from predictions of the existing models. The derived age pattern of volcanism indicates formation of the Corner seamounts at ca. 80 Ma to 76 Ma.

  6. Evidence for age and evolution of Corner seamounts and Great Meteor seamount chain from multibeam bathymetry

    NASA Astrophysics Data System (ADS)

    Tucholke, Brian E.; Smoot, N. Christian

    1990-10-01

    The morphology of the Corner and Cruiser seamounts is discussed and the apparent age of seamount geomorphic features that are thought to have formed at sea level is derived. High-resolution, multibeam bathymetry of the seamounts shows geomorphic features such as guyots and terraces. The pattern of volcanism is consistent with the sequential formation of the New England, Corner, and Great Meteor chain seamounts above the New England hotspot. However, Late Cretaceous and Cenozoic absolute motion of the African plate over the hotspot differs significantly from predictions of the existing models. The derived age pattern of volcanism indicates formation of the Corner seamounts at ca. 80 Ma to 76 Ma.

  7. Subaqueous non-vesicular to poorly-vesicular shards: hydroclastic fragmentation on seamounts and summit calderas

    NASA Astrophysics Data System (ADS)

    Mueller, W. U.; Dingwell, D. B.; Downey, W. S.; Mastin, L. G.

    2008-12-01

    Recognizing pyroclastic deposits that originate directly from magmatic and phreatomagmatic explosions in a subaqueous setting is based upon sedimentary structures, such as massive, stratified, and graded beds as well as (pyro)clast size. Ideally such deposits form ordered fining-and thinning-upward sequences. Pumice, scoria, glass shards, euhedral and broken crystals, and lithic fragments are constituents that support an explosive heritage. Recent deep-sea ROV and submersible dives have retrieved non-vesicular to vesicle- poor, mm-scale, mafic shards in 5-15 cm-thick massive and/or graded (stratified) deposits, for which a subaqueous explosive origin has been inferred. These sheet hyaloclastites with variable shard shapes were first documented on Seamount 6 as deep-sea Limu O Pele at water depths > 1000 m. We identified in Seamount 6 samples equant to blocky shards with angular to subrounded terminations, but also subordinate hair-like and contorted glassy filaments, warped shards and irregular shards. Shards display internal laminations (flow-banding?) and have local perlitic fractures. Bubble wall shards derived from scoria burst were rare. In combination with all the above and a poor shard vesicularity (< 2%), a magmatic explosive origin seems improbable. Such small-volume deposits have been reported from seamounts and summit calderas associated with subaqueous drainage tubes and ponded magma in depths > 1000 m. We envision that hydrostatic pressure commensurate with water depth played a significant role. The deposits can be readily explained by a hydroclastic process whereby fragmentation occurred at the milli-second (Limu) to second scale (hyaloclastite). Hence, hyperquenched glass shards or thread-like glass filaments need not require magmatic explosivity. Constant surface interaction between aphyric, low-viscosity, high temperature, magma-lava at depth with seawater causes fragmentation (granulation) that can generate such delicate shards. The transfer of

  8. Borders of life: lessons from Microbiology of deep-sea hydrothermal vents

    NASA Astrophysics Data System (ADS)

    Prieur, D.

    Thirty years ago, the deep-sea was known as a low density biotope due to coldness, darkness and famine-like conditions. The discovery of deep-sea hydrothermal vents in the Eastern Pacific in 1977 and the associated black smokers in 1979 considerably changed our views about life on Earth. For the first time, an ecosystem almost independent (at least for tens of years) of solar nergy was discovered. Besides the spectacular and unexpected communities of invertebrates based on symbiotic associations with chemo-litho-autotrophic bacteria, prokaryotic communities associated with high temperature black smokers fascinated microbiologists of extreme environments. Within mineral structures where temperature gradients may fluctuate from ambient seawater temperatures (2°C) up to 350°C, thermophilic (optimal growth above 60°C) and hyperthermophilic (optimal growth above 80°C) microorganisms thrived under very severe conditions due to elevated hydrostatic pressure, toxic compounds or strong ionizing radiations. These organisms belong to both domains of Bacteria and Archaea and live aerobically but mostly anaerobically, using a variety of inorganic and organic carbon sources, and a variety of electron donnors and acceptors as well. The most thermophilic organism known on Earth was isolated from a mid-Atlantic-Ridge hydrotermal vent: Pyrolobus fumarii grows optimally at 110°c and its upper temperature limit for life is 113°C. Such an organism survived to autoclaving conditions currently used for sterilization procedures. Many other hyperthermophilic organisms were isolated and described, including fermenters, sulphate and sulphur reducers, hydrogen oxidizers, nitrate reducers, methanogens, etc. Although most of anaerobes are killed when exposed to oxygen, several deep-sea hyperthermophiles appeared to survive to both oxygen and starvation exposures, indicating that they probably can colonize rather distant environments Because of elevated hydrostatic pressure that exists at

  9. Ultra-deep sequencing of foraminiferal microbarcodes unveils hidden richness of early monothalamous lineages in deep-sea sediments.

    PubMed

    Lecroq, Béatrice; Lejzerowicz, Franck; Bachar, Dipankar; Christen, Richard; Esling, Philippe; Baerlocher, Loïc; Østerås, Magne; Farinelli, Laurent; Pawlowski, Jan

    2011-08-09

    Deep-sea floors represent one of the largest and most complex ecosystems on Earth but remain essentially unexplored. The vastness and remoteness of this ecosystem make deep-sea sampling difficult, hampering traditional taxonomic observations and diversity assessment. This problem is particularly true in the case of the deep-sea meiofauna, which largely comprises small-sized, fragile, and difficult-to-identify metazoans and protists. Here, we introduce an ultra-deep sequencing-based metagenetic approach to examine the richness of benthic foraminifera, a principal component of deep-sea meiofauna. We used Illumina sequencing technology to assess foraminiferal richness in 31 unsieved deep-sea sediment samples from five distinct oceanic regions. We sequenced an extremely short fragment (36 bases) of the small subunit ribosomal DNA hypervariable region 37f, which has been shown to accurately distinguish foraminiferal species. In total, we obtained 495,978 unique sequences that were grouped into 1,643 operational taxonomic units, of which about half (841) could be reliably assigned to foraminifera. The vast majority of the operational taxonomic units (nearly 90%) were either assigned to early (ancient) lineages of soft-walled, single-chambered (monothalamous) foraminifera or remained undetermined and yet possibly belong to unknown early lineages. Contrasting with the classical view of multichambered taxa dominating foraminiferal assemblages, our work reflects an unexpected diversity of monothalamous lineages that are as yet unknown using conventional micropaleontological observations. Although we can only speculate about their morphology, the immense richness of deep-sea phylotypes revealed by this study suggests that ultra-deep sequencing can improve understanding of deep-sea benthic diversity considered until now as unknowable based on a traditional taxonomic approach.

  10. Comparative genomics reveals a deep-sea sediment-adapted life style of Pseudoalteromonas sp. SM9913

    PubMed Central

    Qin, Qi-Long; Li, Yang; Zhang, Yan-Jiao; Zhou, Zhe-Min; Zhang, Wei-Xin; Chen, Xiu-Lan; Zhang, Xi-Ying; Zhou, Bai-Cheng; Wang, Lei; Zhang, Yu-Zhong

    2011-01-01

    Deep-sea sediment is one of the most important microbial-driven ecosystems, yet it is not well characterized. Genome sequence analyses of deep-sea sedimentary bacteria would shed light on the understanding of this ecosystem. In this study, the complete genome of deep-sea sedimentary bacterium Pseudoalteromonas sp. SM9913 (SM9913) is described and compared with that of the closely related Antarctic surface sea-water ecotype Pseudoalteromonas haloplanktis TAC125 (TAC125). SM9913 has fewer dioxygenase genes than TAC125, indicating a possible sensitivity to reactive oxygen species. Accordingly, experimental results showed that SM9913 was less tolerant of H2O2 than TAC125. SM9913 has gene clusters related to both polar and lateral flagella biosynthesis. Lateral flagella, which are usually present in deep-sea bacteria and absent in the related surface bacteria, are important for the survival of SM9913 in deep-sea environments. With these two flagellar systems, SM9913 can swim in sea water and swarm on the sediment particle surface, favoring the acquisition of nutrients from particulate organic matter and reflecting the particle-associated alternative lifestyle of SM9913 in the deep sea. A total of 12 genomic islands were identified in the genome of SM9913 that may confer specific features unique to SM9913 and absent from TAC125, such as drug and heavy metal resistance. Many signal transduction genes and a glycogen production operon were also present in the SM9913 genome, which may help SM9913 respond to food pulses and store carbon and energy in a deep-sea environment. PMID:20703316

  11. Distribution, abundance, and diversity patterns of the thermoacidophilic "deep-sea hydrothermal vent euryarchaeota 2".

    PubMed

    Flores, Gilberto E; Wagner, Isaac D; Liu, Yitai; Reysenbach, Anna-Louise

    2012-01-01

    Cultivation-independent studies have shown that taxa belonging to the "deep-sea hydrothermal vent euryarchaeota 2" (DHVE2) lineage are widespread at deep-sea hydrothermal vents. While this lineage appears to be a common and important member of the microbial community at vent environments, relatively little is known about their overall distribution and phylogenetic diversity. In this study, we examined the distribution, relative abundance, co-occurrence patterns, and phylogenetic diversity of cultivable thermoacidophilic DHVE2 in deposits from globally distributed vent fields. Results of quantitative polymerase chain reaction assays with primers specific for the DHVE2 and Archaea demonstrate the ubiquity of the DHVE2 at deep-sea vents and suggest that they are significant members of the archaeal communities of established vent deposit communities. Local similarity analysis of pyrosequencing data revealed that the distribution of the DHVE2 was positively correlated with 10 other Euryarchaeota phylotypes and negatively correlated with mostly Crenarchaeota phylotypes. Targeted cultivation efforts resulted in the isolation of 12 axenic strains from six different vent fields, expanding the cultivable diversity of this lineage to vents along the East Pacific Rise and Mid-Atlantic Ridge. Eleven of these isolates shared greater than 97% 16S rRNA gene sequence similarity with one another and the only described isolate of the DHVE2, Aciduliprofundum boonei T469(T). Sequencing and phylogenetic analysis of five protein-coding loci, atpA, EF-2, radA, rpoB, and secY, revealed clustering of isolates according to geographic region of isolation. Overall, this study increases our understanding of the distribution, abundance, and phylogenetic diversity of the DHVE2.

  12. Deep-sea ostracode species diversity: Response to late Quaternary climate change

    USGS Publications Warehouse

    Cronin, T. M.; DeMartino, D.M.; Dwyer, G.S.; Rodriguez-Lazaro, J.

    1999-01-01

    Late Quaternary ostracode assemblages from the North Atlantic Ocean were studied to establish the effect of climatic changes of the past 210,000 yr (marine oxygen isotope stages 7-1) on deep-sea benthic biodiversity and faunal composition. Two-hundred and twenty five samples from the Chain 82-24 Core 4PC (41??43'N, 32??51'W, 3427 m water depth) on the western Mid-Atlantic Ridge revealed high amplitude fluctuations in ostracode abundance and diversity coincident with orbital and suborbital scale climate oscillations measured by several paleoceanographic proxy records. During the past 210,000 yr, ostracode biodiversity as measured by species number (S) and the Shannon-Weaver index, H(S), oscillated from H(S) = 0.4 during glacial periods (marine isotope stages 6, 5d, 5b, 4, and 2) to H(S) = 1.1 during interglacial and interstadial periods (stages 7, 5e, 5c, 5a, 3 and 1). A total of 23 diversity peaks could be recognized. Eleven of these signify major periods of high diversity [H(S) > 0.8, S = 10-21] occurring every 15-20 ka. Twelve were minor peaks which may represent millennial-scale diversity oscillations. The composition of ostracode assemblages varies with Krithe-dominated assemblages characterizing glacial intervals, and Argilloecia-Cytheropteron characterizing deglacials, and trachyleberid genera (Poseidonamicus, Echinocythereis, Henryhowella, Oxycythereis) abundant during interglacials. Diversity and faunal composition changes can be matched to independent deep-sea paleoceanographic tracers such as benthic foraminiferal carbon isotopes, Krithe trace elements (Mg/Ca ratios), and to North Atlantic region climate records such as Greenland ice cores. When interpreted in light of ostracode species' ecology, these faunal and diversity patterns provide evidence that deep-sea benthic ecosystems experience significant reorganization in response to climate changes over orbital to millennial timescales.

  13. Community transcriptomic assembly reveals microbes that contribute to deep-sea carbon and nitrogen cycling.

    PubMed

    Baker, Brett J; Sheik, Cody S; Taylor, Chris A; Jain, Sunit; Bhasi, Ashwini; Cavalcoli, James D; Dick, Gregory J

    2013-10-01

    The deep ocean is an important component of global biogeochemical cycles because it contains one of the largest pools of reactive carbon and nitrogen on earth. However, the microbial communities that drive deep-sea geochemistry are vastly unexplored. Metatranscriptomics offers new windows into these communities, but it has been hampered by reliance on genome databases for interpretation. We reconstructed the transcriptomes of microbial populations from Guaymas Basin, in the deep Gulf of California, through shotgun sequencing and de novo assembly of total community RNA. Many of the resulting messenger RNA (mRNA) contiguous sequences contain multiple genes, reflecting co-transcription of operons, including those from dominant members. Also prevalent were transcripts with only limited representation (2.8 times coverage) in a corresponding metagenome, including a considerable portion (1.2 Mb total assembled mRNA sequence) with similarity (96%) to a marine heterotroph, Alteromonas macleodii. This Alteromonas and euryarchaeal marine group II populations displayed abundant transcripts from amino-acid transporters, suggesting recycling of organic carbon and nitrogen from amino acids. Also among the most abundant mRNAs were catalytic subunits of the nitrite oxidoreductase complex and electron transfer components involved in nitrite oxidation. These and other novel genes are related to novel Nitrospirae and have limited representation in accompanying metagenomic data. High throughput sequencing of 16S ribosomal RNA (rRNA) genes and rRNA read counts confirmed that Nitrospirae are minor yet widespread members of deep-sea communities. These results implicate a novel bacterial group in deep-sea nitrite oxidation, the second step of nitrification. This study highlights metatranscriptomic assembly as a valuable approach to study microbial communities.

  14. Deep-sea coral record of human impact on watershed quality in the Mississippi River Basin

    NASA Astrophysics Data System (ADS)

    Prouty, Nancy G.; Roark, E. Brendan; Koenig, Alan E.; Demopoulos, Amanda W. J.; Batista, Fabian C.; Kocar, Benjamin D.; Selby, David; McCarthy, Matthew D.; Mienis, Furu

    2014-01-01

    One of the greatest drivers of historical nutrient and sediment transport into the Gulf of Mexico is the unprecedented scale and intensity of land use change in the Mississippi River Basin. These landscape changes are linked to enhanced fluxes of carbon and nitrogen pollution from the Mississippi River, and persistent eutrophication and hypoxia in the northern Gulf of Mexico. Increased terrestrial runoff is one hypothesis for recent enrichment in bulk nitrogen isotope (δ15N) values, a tracer for nutrient source, observed in a Gulf of Mexico deep-sea coral record. However, unambiguously linking anthropogenic land use change to whole scale shifts in downstream Gulf of Mexico biogeochemical cycles is difficult. Here we present a novel approach, coupling a new tracer of agro-industrialization to a multiproxy record of nutrient loading in long-lived deep-sea corals collected in the Gulf of Mexico. We found that coral bulk δ15N values are enriched over the last 150-200 years relative to the last millennia, and compound-specific amino acid δ15N data indicate a strong increase in baseline δ15N of nitrate as the primary cause. Coral rhenium (Re) values are also strongly elevated during this period, suggesting that 34% of Re is of anthropogenic origin, consistent with Re enrichment in major world rivers. However, there are no pre-anthropogenic measurements of Re to confirm this observation. For the first time, an unprecedented record of natural and anthropogenic Re variability is documented through coral Re records. Taken together, these novel proxies link upstream changes in water quality to impacts on the deep-sea coral ecosystem.

  15. Sediment Microbial Diversity of Three Deep-Sea Hydrothermal Vents Southwest of the Azores.

    PubMed

    Cerqueira, Teresa; Pinho, Diogo; Froufe, Hugo; Santos, Ricardo S; Bettencourt, Raul; Egas, Conceição

    2017-01-31

    Menez Gwen, Lucky Strike and Rainbow are the three most visited and well-known deep-sea hydrothermal vent fields in the Azores region, located in the Mid-Atlantic Ridge. Their distinct geological and ecological features allow them to support a diversity of vent communities, which are largely dependent on Bacteria and Archaea capable of anaerobic or microaerophilic metabolism. These communities play important ecological roles throug