Using Entropy Maximization to Understand the Determinants of Structural Dynamics beyond Native Contact Topology

PubMed Central

Lezon, Timothy R.; Bahar, Ivet

2010-01-01

Comparison of elastic network model predictions with experimental data has provided important insights on the dominant role of the network of inter-residue contacts in defining the global dynamics of proteins. Most of these studies have focused on interpreting the mean-square fluctuations of residues, or deriving the most collective, or softest, modes of motions that are known to be insensitive to structural and energetic details. However, with increasing structural data, we are in a position to perform a more critical assessment of the structure-dynamics relations in proteins, and gain a deeper understanding of the major determinants of not only the mean-square fluctuations and lowest frequency modes, but the covariance or the cross-correlations between residue fluctuations and the shapes of higher modes. A systematic study of a large set of NMR-determined proteins is analyzed using a novel method based on entropy maximization to demonstrate that the next level of refinement in the elastic network model description of proteins ought to take into consideration properties such as contact order (or sequential separation between contacting residues) and the secondary structure types of the interacting residues, whereas the types of amino acids do not play a critical role. Most importantly, an optimal description of observed cross-correlations requires the inclusion of destabilizing, as opposed to exclusively stabilizing, interactions, stipulating the functional significance of local frustration in imparting native-like dynamics. This study provides us with a deeper understanding of the structural basis of experimentally observed behavior, and opens the way to the development of more accurate models for exploring protein dynamics. PMID:20585542

Using entropy maximization to understand the determinants of structural dynamics beyond native contact topology.

PubMed

Lezon, Timothy R; Bahar, Ivet

2010-06-17

Comparison of elastic network model predictions with experimental data has provided important insights on the dominant role of the network of inter-residue contacts in defining the global dynamics of proteins. Most of these studies have focused on interpreting the mean-square fluctuations of residues, or deriving the most collective, or softest, modes of motions that are known to be insensitive to structural and energetic details. However, with increasing structural data, we are in a position to perform a more critical assessment of the structure-dynamics relations in proteins, and gain a deeper understanding of the major determinants of not only the mean-square fluctuations and lowest frequency modes, but the covariance or the cross-correlations between residue fluctuations and the shapes of higher modes. A systematic study of a large set of NMR-determined proteins is analyzed using a novel method based on entropy maximization to demonstrate that the next level of refinement in the elastic network model description of proteins ought to take into consideration properties such as contact order (or sequential separation between contacting residues) and the secondary structure types of the interacting residues, whereas the types of amino acids do not play a critical role. Most importantly, an optimal description of observed cross-correlations requires the inclusion of destabilizing, as opposed to exclusively stabilizing, interactions, stipulating the functional significance of local frustration in imparting native-like dynamics. This study provides us with a deeper understanding of the structural basis of experimentally observed behavior, and opens the way to the development of more accurate models for exploring protein dynamics.

Rapid and Accurate Idea Transfer: Presenting Ideas with Concept Maps

DTIC Science & Technology

2008-07-30

AndolanerAncholik Itihas (Regional Histor of the State Language Movement), Dhaka: Bangla Academy. Muhith. A.M.A. (1978) Bangladesh. Emergence qf a Nation, Dhaka...The incidental learning paradigm presumes that information processed at deeper (i.e., more conceptually connected) levels will result in superior...consideration dovetails with Kinchen and Cabot’s (2007) results showing that Concept Maps enable deeper levels of information processing over PowerPoint

The Influence of Inherited Topography and/or Tectonics on Paleo-channel Systems and Incised Valleys Offshore of South Carolina

NASA Astrophysics Data System (ADS)

Long, A. M.; Hill, J. C.

2016-12-01

The Quaternary paleo-channel and incised valley systems of the Southeastern United States have been well documented onshore; however, few studies have focused on the positions and fill histories of these systems on the continental shelf. The effects of inherited topography can be studied through the integration of seismo-acoustic and core data. Existing offshore datasets have been used to document underlying structural and stratigraphic fabrics deeper than the Quaternary in the sedimentary record. By integrating these results with the published tectonic setting and onshore interpretations, some of the controls on paleo-channel/incised valley positions can be inferred. Preliminary results suggest the stress caused by the uplift along the Cape Fear Arch has been accommodated by shallow folding and reactivation of deeper structures in the South Carolina offshore province. The resultant topography may have dictated both the position and geometry of the fluvial incisions across the shelf. This in turn influences the accommodation space available to be filled in as sea level fluctuates. The depositional facies within the paleo-channel and incised valley range from single, uninterrupted fill to complex and repeated scour and fill with at least four different episodes of erosion and deposition. The observations and interpretations proposed here are the first steps in unraveling the complex interplay between sea level, climate, and tectonic changes on the morphology and stratigraphy of incised valleys and paleo-channels observed offshore of South Carolina.

Using SysML for MBSE analysis of the LSST system

NASA Astrophysics Data System (ADS)

Claver, Charles F.; Dubois-Felsmann, Gregory; Delgado, Francisco; Hascall, Pat; Marshall, Stuart; Nordby, Martin; Schalk, Terry; Schumacher, German; Sebag, Jacques

2010-07-01

The Large Synoptic Survey Telescope is a complex hardware - software system of systems, making up a highly automated observatory in the form of an 8.4m wide-field telescope, a 3.2 billion pixel camera, and a peta-scale data processing and archiving system. As a project, the LSST is using model based systems engineering (MBSE) methodology for developing the overall system architecture coded with the Systems Modeling Language (SysML). With SysML we use a recursive process to establish three-fold relationships between requirements, logical & physical structural component definitions, and overall behavior (activities and sequences) at successively deeper levels of abstraction and detail. Using this process we have analyzed and refined the LSST system design, ensuring the consistency and completeness of the full set of requirements and their match to associated system structure and behavior. As the recursion process proceeds to deeper levels we derive more detailed requirements and specifications, and ensure their traceability. We also expose, define, and specify critical system interfaces, physical and information flows, and clarify the logic and control flows governing system behavior. The resulting integrated model database is used to generate documentation and specifications and will evolve to support activities from construction through final integration, test, and commissioning, serving as a living representation of the LSST as designed and built. We discuss the methodology and present several examples of its application to specific systems engineering challenges in the LSST design.

Effects of microrolling parameters on the microstructure and deformation behavior of pure copper

NASA Astrophysics Data System (ADS)

Jing, Yi; Zhang, Hong-mei; Wu, Hao; Li, Lian-jie; Jia, Hong-bin; Jiang, Zheng-yi

2018-01-01

Microrolling experiments and uniaxial tensile tests of pure copper under different annealing conditions were carried out in this paper. The effects of grain size and reduction on non-uniform deformation, edge cracking, and microstructure were studied. The experimental results showed that the side deformation became more non-uniform, resulting in substantial edge bulge, and the uneven spread increased with increasing grain size and reduction level. When the reduction level reached 80% and the grain size was 65 μm, slight edge cracks occurred. When the grain size was 200 μm, the edge cracks became wider and deeper. No edge cracks occurred when the grain size was 200 μm and the reduction level was less than 60%; edge cracks occurred when the reduction level was increased to 80%. As the reduction level increased, the grains were gradually elongated and appeared as a sheet-like structure along the rolling direction; a fine lamellar structure was obtained when the grain size was 20 μm and the reduction level was less than 60%.

How Deeper Learning and 21st Century Skills Influenced One Suburban District's Transition to 1:1 Student Technology

ERIC Educational Resources Information Center

Dillon, Paula A.

2017-01-01

The purpose of this study was to examine administrator, student, and teacher perceptions of organizational structures, systems, and supports implemented to aid technology integration, and the potential for that technology integration to achieve 21st century skill acquisition and deeper learning in a 1:1 environment. The Diffusion of Innovation…

Community structure and scale-free collections of Erdős-Rényi graphs.

PubMed

Seshadhri, C; Kolda, Tamara G; Pinar, Ali

2012-05-01

Community structure plays a significant role in the analysis of social networks and similar graphs, yet this structure is little understood and not well captured by most models. We formally define a community to be a subgraph that is internally highly connected and has no deeper substructure. We use tools of combinatorics to show that any such community must contain a dense Erdős-Rényi (ER) subgraph. Based on mathematical arguments, we hypothesize that any graph with a heavy-tailed degree distribution and community structure must contain a scale-free collection of dense ER subgraphs. These theoretical observations corroborate well with empirical evidence. From this, we propose the Block Two-Level Erdős-Rényi (BTER) model, and demonstrate that it accurately captures the observable properties of many real-world social networks.

On the emergence of the structure of physics

NASA Astrophysics Data System (ADS)

Majid, S.

2018-04-01

We consider Hilbert's problem of the axioms of physics at a qualitative or conceptual level. This is more pressing than ever as we seek to understand how both general relativity and quantum theory could emerge from some deeper theory of quantum gravity, and in this regard I have previously proposed a principle of self-duality or quantum Born reciprocity as a key structure. Here, I outline some of my recent work around the idea of quantum space-time as motivated by this non-standard philosophy, including a new toy model of gravity on a space-time consisting of four points forming a square. This article is part of the theme issue `Hilbert's sixth problem'.

Identifying influential factors of business process performance using dependency analysis

NASA Astrophysics Data System (ADS)

Wetzstein, Branimir; Leitner, Philipp; Rosenberg, Florian; Dustdar, Schahram; Leymann, Frank

2011-02-01

We present a comprehensive framework for identifying influential factors of business process performance. In particular, our approach combines monitoring of process events and Quality of Service (QoS) measurements with dependency analysis to effectively identify influential factors. The framework uses data mining techniques to construct tree structures to represent dependencies of a key performance indicator (KPI) on process and QoS metrics. These dependency trees allow business analysts to determine how process KPIs depend on lower-level process metrics and QoS characteristics of the IT infrastructure. The structure of the dependencies enables a drill-down analysis of single factors of influence to gain a deeper knowledge why certain KPI targets are not met.

On the emergence of the structure of physics.

PubMed

Majid, S

2018-04-28

We consider Hilbert's problem of the axioms of physics at a qualitative or conceptual level. This is more pressing than ever as we seek to understand how both general relativity and quantum theory could emerge from some deeper theory of quantum gravity, and in this regard I have previously proposed a principle of self-duality or quantum Born reciprocity as a key structure. Here, I outline some of my recent work around the idea of quantum space-time as motivated by this non-standard philosophy, including a new toy model of gravity on a space-time consisting of four points forming a square.This article is part of the theme issue 'Hilbert's sixth problem'. © 2018 The Author(s).

Student perceptions about learning anatomy

NASA Astrophysics Data System (ADS)

Notebaert, Andrew John

This research study was conducted to examine student perceptions about learning anatomy and to explore how these perceptions shape the learning experience. This study utilized a mixed-methods design in order to better understand how students approach learning anatomy. Two sets of data were collected at two time periods; one at the beginning and one at the end of the academic semester. Data consisted of results from a survey instrument that contained open-ended questions and a questionnaire and individual student interviews. The questionnaire scored students on a surface approach to learning (relying on rote memorization and knowing factual information) scale and a deep approach to learning (understanding concepts and deeper meaning behind the material) scale. Students were asked to volunteer from four different anatomy classes; two entry-level undergraduate courses from two different departments, an upper-level undergraduate course, and a graduate level course. Results indicate that students perceive that they will learn anatomy through memorization regardless of the level of class being taken. This is generally supported by the learning environment and thus students leave the classroom believing that anatomy is about memorizing structures and remembering anatomical terminology. When comparing this class experience to other academic classes, many students believed that anatomy was more reliant on memorization techniques for learning although many indicated that memorization is their primary learning method for most courses. Results from the questionnaire indicate that most students had decreases in both their deep approach and surface approach scores with the exception of students that had no previous anatomy experience. These students had an average increase in surface approach and so relied more on memorization and repetition for learning. The implication of these results is that the learning environment may actually amplify students' perceptions of the anatomy course at all levels and experiences of enrolled students. Instructors wanting to foster deeper approaches to learning may need to apply instructional techniques that both support deeper approaches to learning and strive to change students' perceptions away from believing that anatomy is strictly memorization and thus utilizing surface approaches to learning.

Impact of sea level rise on tide gate function.

PubMed

Walsh, Sean; Miskewitz, Robert

2013-01-01

Sea level rise resulting from climate change and land subsidence is expected to severely impact the duration and associated damage resulting from flooding events in tidal communities. These communities must continuously invest resources for the maintenance of existing structures and installation of new flood prevention infrastructure. Tide gates are a common flood prevention structure for low-lying communities in the tidal zone. Tide gates close during incoming tides to prevent inundation from downstream water propagating inland and open during outgoing tides to drain upland areas. Higher downstream mean sea level elevations reduce the effectiveness of tide gates by impacting the hydraulics of the system. This project developed a HEC-RAS and HEC-HMS model of an existing tide gate structure and its upland drainage area in the New Jersey Meadowlands to simulate the impact of rising mean sea level elevations on the tide gate's ability to prevent upstream flooding. Model predictions indicate that sea level rise will reduce the tide gate effectiveness resulting in longer lasting and deeper flood events. The results indicate that there is a critical point in the sea level elevation for this local area, beyond which flooding scenarios become dramatically worse and would have a significantly negative impact on the standard of living and ability to do business in one of the most densely populated areas of America.

Interdecadal changes in the community, population and individual levels of the fish fauna of an extensively modified estuary.

PubMed

Valesini, F J; Cottingham, A; Hallett, C S; Clarke, K R

2017-05-01

This study examined inter-period changes over two to three decades in the fish fauna of an urbanized estuary experiencing rapid population growth and a drying climate (Swan-Canning Estuary, Western Australia). Responses were compared at the fish community level (species composition; 1978-2009 in the shallows and 1993-2009 in deeper waters) and at the population and individual levels of an estuarine indicator species, black bream Acanthopagrus butcheri (biomass-abundance and per capita mass at age, respectively; 1993-2009). All three levels showed distinct shifts from earlier to later periods, but their patterns, sensitivity and breadth differed. Community composition changed markedly in the shallows of the lower-middle estuary between the late 1970s and all later periods and moderately between more disparate periods from 1995 to 2009. Several species trends could be linked to the increasing salinity of the estuary or declining dissolved oxygen levels in its middle-upper reaches. Community changes were, however, small or insignificant in the shallow and deeper waters of the upper estuary and deeper waters of the middle estuary, where environmental perturbations are often most pronounced. This may reflect the resilience of the limited suite of species that typify those reaches and thus their lack of sensitivity in reflecting longer-term change at the coarser level of mean abundance. One such species, the selected indicator, A. butcheri, did, however, show marked temporal changes at both the population and individual levels. Biomass decreased markedly in deeper waters while increasing in the shallows from earlier to later periods, presumably reflecting an onshore movement of fish, and per capita body mass in the 2+, 3+ and 4+ year classes fell steadily over time. Such changes probably indicate deteriorating habitat quality in the deeper waters. The study outcomes provide support for a multifaceted approach to the biomonitoring of estuaries using fishes and highlight the need for complementary monitoring of relevant stressors to better disentangle cause-effect pathways. © 2017 The Fisheries Society of the British Isles.

Neural correlates of post-conventional moral reasoning: a voxel-based morphometry study.

PubMed

Prehn, Kristin; Korczykowski, Marc; Rao, Hengyi; Fang, Zhuo; Detre, John A; Robertson, Diana C

2015-01-01

Going back to Kohlberg, moral development research affirms that people progress through different stages of moral reasoning as cognitive abilities mature. Individuals at a lower level of moral reasoning judge moral issues mainly based on self-interest (personal interests schema) or based on adherence to laws and rules (maintaining norms schema), whereas individuals at the post-conventional level judge moral issues based on deeper principles and shared ideals. However, the extent to which moral development is reflected in structural brain architecture remains unknown. To investigate this question, we used voxel-based morphometry and examined the brain structure in a sample of 67 Master of Business Administration (MBA) students. Subjects completed the Defining Issues Test (DIT-2) which measures moral development in terms of cognitive schema preference. Results demonstrate that subjects at the post-conventional level of moral reasoning were characterized by increased gray matter volume in the ventromedial prefrontal cortex and subgenual anterior cingulate cortex, compared with subjects at a lower level of moral reasoning. Our findings support an important role for both cognitive and emotional processes in moral reasoning and provide first evidence for individual differences in brain structure according to the stages of moral reasoning first proposed by Kohlberg decades ago.

Results and implications of new regional seismic lines in the Malay Basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leslie, W.; Ho, W.K.; Ghani, M.A.

1994-07-01

Regional seismic data, which was previously acquired between 1968 and 1971 by early operators in the Malay Basin, has limitations because the sophisticated modern-day acquisition and processing techniques were not available. These old data do not permit confident mapping below 3 s (TWT), equivalent to approximately 3000 m subsea, but aeromagnetic data indicate that the total sedimentary thickness exceeds 13,000 m. Hence, existing regional seismic data with a record length of 5 s (TWT) is neither adequate to map deeper play opportunities nor able to aid in understanding the geological history of the basin. New plays at deeper levels maymore » exist. (1) Geochemical modeling results now predict the top of the oil generation window at depths greater than previously thought. (2) Existing gas fields occur in the upper section in areas of thickest sedimentary fill but underlying targets have not been tested. (3) Past exploration has been focused on oil and not gas in deeper structures. Because of Malaysia's rapid development and its dedication to the protection of the environment, gas is becoming an increasingly important energy source. Hence, ample internal markets for additional gas discoveries are being created. A better understanding of the Malay Basin geological history will assist in locating these potential plays. To do this, Petronas acquired approximately 3000 line km of high-quality regional seismic data to further exploration efforts in this prospective region.« less

Contributions of historical and contemporary geographic and environmental factors to phylogeographic structure in a Tertiary relict species, Emmenopterys henryi (Rubiaceae)

PubMed Central

Zhang, Yong-Hua; Wang, Ian J.; Comes, Hans Peter; Peng, Hua; Qiu, Ying-Xiong

2016-01-01

Examining how historical and contemporary geographic and environmental factors contribute to genetic divergence at different evolutionary scales is a central yet largely unexplored question in ecology and evolution. Here, we examine this key question by investigating how environmental and geographic factors across different epochs have driven genetic divergence at deeper (phylogeographic) and shallower (landscape genetic) evolutionary scales in the Chinese Tertiary relict tree Emmenopterys henryi. We found that geography played a predominant role at all levels – phylogeographic clades are broadly geographically structured, the deepest levels of divergence are associated with major geological or pre-Quaternary climatic events, and isolation by distance (IBD) primarily explained population genetic structure. However, environmental factors are clearly also important – climatic fluctuations since the Last Interglacial (LIG) have likely contributed to phylogeographic structure, and the population genetic structure (in our AFLP dataset) was partly explained by isolation by environment (IBE), which may have resulted from natural selection in environments with divergent climates. Thus, historical and contemporary geography and historical and contemporary environments have all shaped patterns of genetic structure in E. henryi, and, in fact, changes in the landscape through time have also been critical factors. PMID:27137438

Contributions of historical and contemporary geographic and environmental factors to phylogeographic structure in a Tertiary relict species, Emmenopterys henryi (Rubiaceae).

PubMed

Zhang, Yong-Hua; Wang, Ian J; Comes, Hans Peter; Peng, Hua; Qiu, Ying-Xiong

2016-05-03

Examining how historical and contemporary geographic and environmental factors contribute to genetic divergence at different evolutionary scales is a central yet largely unexplored question in ecology and evolution. Here, we examine this key question by investigating how environmental and geographic factors across different epochs have driven genetic divergence at deeper (phylogeographic) and shallower (landscape genetic) evolutionary scales in the Chinese Tertiary relict tree Emmenopterys henryi. We found that geography played a predominant role at all levels - phylogeographic clades are broadly geographically structured, the deepest levels of divergence are associated with major geological or pre-Quaternary climatic events, and isolation by distance (IBD) primarily explained population genetic structure. However, environmental factors are clearly also important - climatic fluctuations since the Last Interglacial (LIG) have likely contributed to phylogeographic structure, and the population genetic structure (in our AFLP dataset) was partly explained by isolation by environment (IBE), which may have resulted from natural selection in environments with divergent climates. Thus, historical and contemporary geography and historical and contemporary environments have all shaped patterns of genetic structure in E. henryi, and, in fact, changes in the landscape through time have also been critical factors.

An investigation into the blood-flow characteristics of telangiectatic skin lesions in systemic sclerosis using dual-wavelength laser Doppler imaging.

PubMed

Murray, A K; Moore, T L; Griffiths, C E M; Herrick, A L

2009-07-01

Superficial telangiectases associated with systemic sclerosis may be more responsive to treatment than those deeper in the dermis. We investigated whether dual-wavelength laser Doppler imaging (LDI) is sufficiently sensitive to ascertain the distribution of blood flow within telangiectases and whether blood flow relates to telangiectatic diameter. The perfusion and diameter of 20 telangiectases were measured in superficial and deeper layers of the skin using dual-wavelength LDI. Of 20 telangiectases, 18 had higher blood flow in the red (representing deeper blood flow), rather than the green (representing superficial blood flow) wavelength images. Clinically apparent diameters correlated with those of the superficial (r = 0.61, P = 0.01), but not with the deeper blood flow images. Hence, the apparent size of telangiectases at the skin surface does not predict blood flow through the microvessel(s) at deeper levels, and thus clinically apparent size is unlikely to predict treatment response. Dual-wavelength LDI may help predict treatment response.

Coupled long-term summer warming and deeper snow alters species composition and stimulates gross primary productivity in tussock tundra.

PubMed

Leffler, A Joshua; Klein, Eric S; Oberbauer, Steven F; Welker, Jeffrey M

2016-05-01

Climate change is expected to increase summer temperature and winter precipitation throughout the Arctic. The long-term implications of these changes for plant species composition, plant function, and ecosystem processes are difficult to predict. We report on the influence of enhanced snow depth and warmer summer temperature following 20 years of an ITEX experimental manipulation at Toolik Lake, Alaska. Winter snow depth was increased using snow fences and warming was accomplished during summer using passive open-top chambers. One of the most important consequences of these experimental treatments was an increase in active layer depth and rate of thaw, which has led to deeper drainage and lower soil moisture content. Vegetation concomitantly shifted from a relatively wet system with high cover of the sedge Eriophorum vaginatum to a drier system, dominated by deciduous shrubs including Betula nana and Salix pulchra. At the individual plant level, we observed higher leaf nitrogen concentration associated with warmer temperatures and increased snow in S. pulchra and B. nana, but high leaf nitrogen concentration did not lead to higher rates of net photosynthesis. At the ecosystem level, we observed higher GPP and NEE in response to summer warming. Our results suggest that deeper snow has a cascading set of biophysical consequences that include a deeper active layer that leads to altered species composition, greater leaf nitrogen concentration, and higher ecosystem-level carbon uptake.

Structural architecture of the central Brooks Range foothills, Alaska

USGS Publications Warehouse

Moore, Thomas E.; Potter, Christopher J.; O'Sullivan, Paul B.

2002-01-01

Five structural levels underlie the Brooks Range foothills, from lowest to highest: (1) autochthon, at a depth of ~9 km; (2) Endicott Mountains allochthon (EMA), thickest under the northern Brooks Range (>15 km) and wedging out northward above the autochthon; (3) higher allochthons (HA), with a composite thickness of 1.5+ km, wedging out northward at or beyond the termination of EMA; (4) Aptian-Albian Fortress Mountain Formation (FM), deposited unconformably on deformed EMA and HA and thickening northward into a >7-km-thick succession of deformed turbidites (Torok Formation); (5) gently folded Albian-Cenomanian deltaic deposits (Nanushuk Group). The dominant faulting pattern in levels 2-3 is thin-skinned thrusting and thrust-related folds formed before deposition of Cretaceous strata. These structures are cut by younger steeply south-dipping reverse faults that truncate and juxtapose structural levels 1-4 and expose progressively deeper structural levels to the south. Structural levels 4-5 are juxtaposed along a north-dipping zone of south-vergent folds and thrusts. Stratigraphic and fission-track age data suggest a kinematic model wherein the foothills belt was formed first, by thrusting of HA and EMA as deformational wedges onto the regionally south-dipping authochon at 140-120Ma. After deposition of FM and Torok during mid-Cretaceous hinterland extension and uplift, a second episode of contractional deformation at 60 Ma shortened the older allochthonous deformational wedges (EMA, HA) and overlying strata on north-vergent reverse faults. To the north, where the allochthons wedge out, shortening caused duplexing in the Torok and development of a triangle zone south of the Tuktu escarpment.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Datta, Kaustuv; Neder, Reinhard B.; Chen, Jun

Revelation of unequivocal structural information at the atomic level for complex systems is uniquely important for deeper and generic understanding of the structure property connections and a key challenge in materials science. Here in this paper we report an experimental study of the local structure by applying total elastic scattering and Raman scattering analyses to an important non-relaxor ferroelectric solid solution exhibiting the so-called composition-induced morphotropic phase boundary (MPB), where concomitant enhancement of physical properties have been detected. The powerful combination of static and dynamic structural probes enabled us to derive direct correspondence between the atomic-level structural correlations and reportedmore » properties. The atomic pair distribution functions obtained from the neutron total scattering experiments were analysed through big-box atom-modelling implementing reverse Monte Carlo method, from which distributions of magnitudes and directions of off-centred cationic displacements were extracted. We found that an enhanced randomness of the displacement-directions for all ferroelectrically active cations combined with a strong dynamical coupling between the A- and B-site cations of the perovskite structure, can explain the abrupt amplification of piezoelectric response of the system near MPB. Finally, altogether this provides a more fundamental basis in inferring structure-property connections in similar systems including important implications in designing novel and bespoke materials.« less

Atomic-level structural correlations across the morphotropic phase boundary of a ferroelectric solid solution: xBiMg 1/2Ti 1/2O 3-(1$-$x)PbTiO 3

DOE PAGES

Datta, Kaustuv; Neder, Reinhard B.; Chen, Jun; ...

2017-03-28

Revelation of unequivocal structural information at the atomic level for complex systems is uniquely important for deeper and generic understanding of the structure property connections and a key challenge in materials science. Here in this paper we report an experimental study of the local structure by applying total elastic scattering and Raman scattering analyses to an important non-relaxor ferroelectric solid solution exhibiting the so-called composition-induced morphotropic phase boundary (MPB), where concomitant enhancement of physical properties have been detected. The powerful combination of static and dynamic structural probes enabled us to derive direct correspondence between the atomic-level structural correlations and reportedmore » properties. The atomic pair distribution functions obtained from the neutron total scattering experiments were analysed through big-box atom-modelling implementing reverse Monte Carlo method, from which distributions of magnitudes and directions of off-centred cationic displacements were extracted. We found that an enhanced randomness of the displacement-directions for all ferroelectrically active cations combined with a strong dynamical coupling between the A- and B-site cations of the perovskite structure, can explain the abrupt amplification of piezoelectric response of the system near MPB. Finally, altogether this provides a more fundamental basis in inferring structure-property connections in similar systems including important implications in designing novel and bespoke materials.« less

Paleozoic-involving thrust array in the central Sierras Interiores (South Pyrenean Zone, Central Pyrenees): regional implications

NASA Astrophysics Data System (ADS)

Rodriguez, L.; Cuevas, J.; Tubía, J. M.

2012-04-01

This work deals with the structural evolution of the Sierras Interiores between the Tena and Aragon valleys. The Sierras Interiores is a WNW-trending mountain range that bounds the South Pyrenean Zone to the north and that is characterized by a thrust-fold system with a strong lithological control that places preferably decollements in Triassic evaporites. In the studied area of the Sierras Interiores Cenomanian limestones cover discordantly the Paleozoic rocks of the Axial Zone because there is a stratigraphic lacuna developed from Triassic to Late Cretaceous times. A simple lithostratigraphy of the study area is made up of Late Cenomanian to Early Campanian limestones with grey colour and massive aspect in landscape (170 m, Lower calcareous section), Campanian to Maastrichtian brown coloured sandstones (400-600 m, Marboré sandstones) and, finally, Paleocene light-coloured massive limestones (130-230 m), that often generate the higher topographic levels of the Sierras Interiores due to their greater resistance to erosion. Above the sedimentary sequence of the Sierras Interiores, the Jaca Basin flysch succession crops out discordantly. Based on a detailed mapping of the studied area of the Sierras Interiores, together with well and structural data of the Jaca Basin (Lanaja, 1987; Rodríguez and Cuevas, 2008) we have constructed a 12 km long NS cross section, approximately parallel to the movement direction deduced for this region (Rodríguez et al., 2011). The main structure is a thrust array made up of at least four Paleozoic-involving thrusts (the deeper thrust system) of similar thickness in a probably piggyback sequence, some of which are blind thrusts that generate fold-propagation-folds in upper levels. The higher thrust of the thrust array crops out duplicating the lower calcareous section all over the Sierras Interiores. The emplacement of the deeper thrust system generated the tightness of previous structures: south directed piggyback duplexes (the upper thrust system) affecting the Marboré sandstones and the Paleocene limestones, deformed by angular south-vergent folds and their related axial plane foliation. The transect explained above clearly summarizes the alpine evolution of northern part of the Sierras Interiores. Moreover, well data available indicate the presence of two thrust soled in the lower calcareous section covering Triassic evaporites at 5 km depth and 8 km to the south of the Sierras Interiores. Because the Triassic evaporites constitute a main decollement level in the South Pyrenean Zone, the deeper thrust system is associated to the emplacement of the Gavarnie nappe. Lanaja, J.M., 1987, Contribución de la exploración petrolífera al conocimiento de la Geología de España, IGME, Madrid, 465 p. Rodríguez, L., Cuevas, J., 2008. Geogaceta 44, 51-54. Rodríguez, L., Cuevas, J., Tubia, J.M., 2011. Geophysical Research Abstracts 13, 2273.

Global dilemmas and the plausibility of whole-system change

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harman, W.W.

1995-05-01

Approaching the global dilemmas of our time with whole-system thinking implies that the much-talked-about problems of environmental degradation, deforestation, desertification, man-made climate change, chronic hunger and poverty, etc. are not so much problems as symptoms of a deeper-level condition that must be dealt with. This has to do with the basic incompatibility between widely proclaimed goals and underlying system assumptions. Pressures toward whole-system change are increasing in intensity. The critical issue is whether that change can be smooth and nondisruptive, or whether it will involve some disintegration of present structures. Constructive interventions are discussed. 1 tab.

Characterization of Scenedesmus obtusiusculus AT-UAM for high-energy molecules accumulation: deeper insight into biotechnological potential of strains of the same species.

PubMed

Toledo-Cervantes, Alma; Garduño Solórzano, Gloria; Campos, Jorge E; Martínez-García, Martha; Morales, Marcia

2018-03-01

Scenedesmus obtusiusculus AT-UAM, isolated from Cuatro Ciénegas wetlands in Mexico was taxonomically, molecularly and biochemically compared to S. obtusiusculus CCAP 276/25 (Culture Collection of Algae and Protozoa, Scotland, UK). Analysis of Internal Transcribed Spacer 2 (ITS2) secondary structures confirmed that the mexican strain belongs to S. obtusiusculus with one change in the ITS2 nucleotide sequence. However, both strains exhibited different biochemical and fatty acid profiles and therefore biotechnological potential, emphasizing the need for deeper studies among strains of the same species. Furthermore, the biochemical variations of S. obtusiusculus AT-UAM under nitrogen starvation and different levels of irradiance were evaluated. The maximum lipid production (1730 mg L -1 ) was obtained at 613 μmol m -2  s -1 while the highest carbohydrate content (49%) was achieved at 896 μmol m -2  s -1 . Additionally, this strain was capable of storing lipids (∼52%) and carbohydrates (∼40%) under outdoor condition depending on the light availability in the cultivation broth.

Condition Monitoring of Urban Infrastructure : Effects of Ground Movement on Adjacent Structures

DOT National Transportation Integrated Search

2012-09-26

Economic considerations drive the more effective use of space in urban areas, promoting the construction of taller buildings with deeper basement structures. The crowded nature of urban environments imposes strict restrictions to the tolerable perfor...

Neural Correlates of Post-Conventional Moral Reasoning: A Voxel-Based Morphometry Study

PubMed Central

Prehn, Kristin; Korczykowski, Marc; Rao, Hengyi; Fang, Zhuo; Detre, John A.; Robertson, Diana C.

2015-01-01

Going back to Kohlberg, moral development research affirms that people progress through different stages of moral reasoning as cognitive abilities mature. Individuals at a lower level of moral reasoning judge moral issues mainly based on self-interest (personal interests schema) or based on adherence to laws and rules (maintaining norms schema), whereas individuals at the post-conventional level judge moral issues based on deeper principles and shared ideals. However, the extent to which moral development is reflected in structural brain architecture remains unknown. To investigate this question, we used voxel-based morphometry and examined the brain structure in a sample of 67 Master of Business Administration (MBA) students. Subjects completed the Defining Issues Test (DIT-2) which measures moral development in terms of cognitive schema preference. Results demonstrate that subjects at the post-conventional level of moral reasoning were characterized by increased gray matter volume in the ventromedial prefrontal cortex and subgenual anterior cingulate cortex, compared with subjects at a lower level of moral reasoning. Our findings support an important role for both cognitive and emotional processes in moral reasoning and provide first evidence for individual differences in brain structure according to the stages of moral reasoning first proposed by Kohlberg decades ago. PMID:26039547

Water temperature effects from simulated changes to dam operations and structures in the Middle and South Santiam Rivers, Oregon

USGS Publications Warehouse

Buccola, Norman L.

2017-05-31

Green Peter and Foster Dams on the Middle and South Santiam Rivers, Oregon, have altered the annual downstream water temperature profile (cycle). Operation of the dams has resulted in cooler summer releases and warmer autumn releases relative to pre-dam conditions, and that alteration can hinder recovery of various life stages of threatened spring-run Chinook salmon (Oncorhyncus tshawytscha) and winter steelhead (O. mykiss). Lake level management and the use of multiple outlets from varying depths at the dams can enable the maintenance of a temperature regime more closely resembling that in which the fish evolved by releasing warm surface water during summer and cooler, deeper water in the autumn. At Green Peter and Foster Dams, the outlet configuration is such that temperature control is often limited by hydropower production at the dams. Previously calibrated CE-QUAL-W2 water temperature models of Green Peter and Foster Lakes were used to simulate the downstream thermal effects from hypothetical structures and modified operations at the dams. Scenarios with no minimum power production requirements allowed some releases through shallower and deeper outlets (summer and autumn) to achieve better temperature control throughout the year and less year-to-year variability in autumn release temperatures. Scenarios including a hypothetical outlet floating 1 meter below the lake surface resulted in greater ability to release warm water during summer compared to existing structures. Later in Autumn (October 15–December 31), a limited amount of temperature control was realized downstream from Foster Dam by scenarios limited to operational changes with existing structures, resulting in 15-day averages within 1.0 degree Celsius of current operations.

A complete, multi-level conformational clustering of antibody complementarity-determining regions

PubMed Central

Nikoloudis, Dimitris; Pitts, Jim E.

2014-01-01

Classification of antibody complementarity-determining region (CDR) conformations is an important step that drives antibody modelling and engineering, prediction from sequence, directed mutagenesis and induced-fit studies, and allows inferences on sequence-to-structure relations. Most of the previous work performed conformational clustering on a reduced set of structures or after application of various structure pre-filtering criteria. In this study, it was judged that a clustering of every available CDR conformation would produce a complete and redundant repertoire, increase the number of sequence examples and allow better decisions on structure validity in the future. In order to cope with the potential increase in data noise, a first-level statistical clustering was performed using structure superposition Root-Mean-Square Deviation (RMSD) as a distance-criterion, coupled with second- and third-level clustering that employed Ramachandran regions for a deeper qualitative classification. The classification of a total of 12,712 CDR conformations is thus presented, along with rich annotation and cluster descriptions, and the results are compared to previous major studies. The present repertoire has procured an improved image of our current CDR Knowledge-Base, with a novel nesting of conformational sensitivity and specificity that can serve as a systematic framework for improved prediction from sequence as well as a number of future studies that would aid in knowledge-based antibody engineering such as humanisation. PMID:25071986

Information Theory Applied to Animal Communication Systems and Its Possible Application to SETI

NASA Astrophysics Data System (ADS)

Hanser, Sean F.; Doyle, Laurance R.; McCowan, Brenda; Jenkins, Jon M.

2004-06-01

Information theory, as first introduced by Claude Shannon (Shannon &Weaver 1949) quantitatively evaluates the organizational complexity of communication systems. At the same time George Zipf was examining linguistic structure in a way that was mathematically similar to the components of the Shannon first-order entropy (Zipf 1949). Both Shannon's and Zipf's mathematical procedures have been applied to animal communication and recently have been providing insightful results. The Zipf plot is a useful tool for a first estimate of the characterization of a communication system's complexity (which can later be examined for complex structure at deeper levels using Shannon entropic analysis). In this paper we shall discuss some of the applications and pitfalls of using the Zipf distribution as a preliminary evaluator of the communication complexity of a signaling system.

Interactions between cumulus convection and its environment as revealed by the MC3E sounding array

DOE PAGES

Xie, Shaocheng; Zhang, Yunyan; Giangrande, Scott E.; ...

2014-10-27

This study attempts to understand interactions between midlatitude convective systems and their environments through a heat and moisture budget analysis using the sounding data collected from the Midlatitude Continental Convective Clouds Experiment (MC3E) in central Oklahoma. Distinct large-scale structures and diabatic heating and drying profiles are presented for cases of weaker and elevated thunderstorms as well as intense squall line and supercell thunderstorm events during the campaign. The elevated cell events were nocturnal convective systems occurring in an environment having low convective available potential energy (CAPE) and a very dry boundary layer. In contrast, deeper convective events happened during themore » morning into early afternoon within an environment associated with large CAPE and a near-saturated boundary layer. As the systems reached maturity, the diagnosed diabatic heating in the latter deep convective cases was much stronger and of greater vertical extent than the former. Both groups showed considerable diabatic cooling in the lower troposphere, associated with the evaporation of precipitation and low-level clouds. The horizontal advection of moisture also played a dominant role in moistening the lower troposphere, particularly for the deeper convective events, wherein the near surface southeasterly flow allows persistent low-level moisture return from the Gulf of Mexico to support convection. The moisture convergence often was present before these systems develop, suggesting a strong correlation between the large-scale moisture convergence and convection. As a result, sensitivity tests indicated that the uncertainty in the surface precipitation and the size of analysis domain mainly affected the magnitude of these analyzed fields rather than their vertical structures.« less

Normal and reversed supramolecular chirality of insulin fibrils probed by vibrational circular dichroism at the protofilament level of fibril structure.

PubMed

Kurouski, Dmitry; Dukor, Rina K; Lu, Xuefang; Nafie, Laurence A; Lednev, Igor K

2012-08-08

Fibrils are β-sheet-rich aggregates that are generally composed of several protofibrils and may adopt variable morphologies, such as twisted ribbons or flat-like sheets. This polymorphism is observed for many different amyloid associated proteins and polypeptides. In a previous study we proposed the existence of another level of amyloid polymorphism, namely, that associated with fibril supramolecular chirality. Two chiral polymorphs of insulin, which can be controllably grown by means of small pH variations, exhibit opposite signs of vibrational circular dichroism (VCD) spectra. Herein, using atomic force microscopy (AFM) and scanning electron microscopy (SEM), we demonstrate that indeed VCD supramolecular chirality is correlated not only by the apparent fibril handedness but also by the sense of supramolecular chirality from a deeper level of chiral organization at the protofilament level of fibril structure. Our microscopic examination indicates that normal VCD fibrils have a left-handed twist, whereas reversed VCD fibrils are flat-like aggregates with no obvious helical twist as imaged by atomic force microscopy or scanning electron microscopy. A scheme is proposed consistent with observed data that features a dynamic equilibrium controlled by pH at the protofilament level between left- and right-twist fibril structures with distinctly different aggregation pathways for left- and right-twisted protofilaments. Copyright © 2012 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Occupied and unoccupied electronic structures of an L-cysteine film studied by core-absorption and resonant photoelectron spectroscopies

NASA Astrophysics Data System (ADS)

Kamada, M.; Hideshima, T.; Azuma, J.; Yamamoto, I.; Imamura, M.; Takahashi, K.

2016-04-01

Unoccupied and occupied electronic structures of an L-cysteine film have been studied by absorption and resonant photoelectron spectroscopies. Core absorptions at S-L, C-K, N-K, and O-K levels indicate that the lower unoccupied states are predominantly composed of oxygen-2p, carbon-2p, and sulfur-4s+3d orbitals, while higher unoccupied states may be attributed dominantly to nitrogen-np (n ≥ 3), oxygen-np (n ≥ 3), and sulfur-ns+md (n ≥ 4, m ≥ 3) orbitals. Resonant photoelectron spectra at S-L23 and O-K levels indicate that the highest occupied state is originated from sulfur-3sp orbitals, while oxygen-2sp orbitals contribute to the deeper valence states. The delocalization lifetimes of the oxygen-1s and sulfur-2p excited states are estimated from a core-hole clock method to be about 9 ± 1 and 125 ± 25 fs, respectively.

Thermal structure and heat balance of the outer planets

NASA Technical Reports Server (NTRS)

Conrath, B. J.; Hanel, R. A.; Samuelson, R. E.

1989-01-01

Current knowledge of the thermal structure and energy balance of the outer planets is summarized. The Voyager spacecraft experiments have provided extensive new information on the atmospheric temperatures and energetics of Jupiter, Saturn and Uranus. All three planets show remarkably small global-scale horizontal thermal contrast, indicating efficient redistribution of heat within the atmospheres or interiors. Horizontal temperature gradients on the scale of the zonal jets indicate that the winds decay with height in the upper troposphere. This suggests that the winds are driven at deeper levels and are subjected to frictional damping of unknown origin at higher levels. Both Jupiter and Saturn have internal power sources equal to about 70 percent of the absorbed solar power. This result is consistent with the view that significant helium differentiation has occurred on Saturn. Uranus has an internal power no greater than 13 percent of the absorbed solar power, while earth-based observations suggest Neptune has an internal power in excess of 100 percent of the absorbed solar power.

Occupied and unoccupied electronic structures of an L-cysteine film studied by core-absorption and resonant photoelectron spectroscopies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kamada, M., E-mail: kamada@cc.saga-u.ac.jp; Hideshima, T.; Azuma, J.

2016-04-15

Unoccupied and occupied electronic structures of an L-cysteine film have been studied by absorption and resonant photoelectron spectroscopies. Core absorptions at S-L, C-K, N-K, and O-K levels indicate that the lower unoccupied states are predominantly composed of oxygen-2p, carbon-2p, and sulfur-4s+3d orbitals, while higher unoccupied states may be attributed dominantly to nitrogen-np (n ≥ 3), oxygen-np (n ≥ 3), and sulfur-ns+md (n ≥ 4,  m ≥ 3) orbitals. Resonant photoelectron spectra at S-L{sub 23} and O-K levels indicate that the highest occupied state is originated from sulfur-3sp orbitals, while oxygen-2sp orbitals contribute to the deeper valence states. The delocalization lifetimesmore » of the oxygen-1s and sulfur-2p excited states are estimated from a core-hole clock method to be about 9 ± 1 and 125 ± 25 fs, respectively.« less

Is quantum theory a form of statistical mechanics?

NASA Astrophysics Data System (ADS)

Adler, S. L.

2007-05-01

We give a review of the basic themes of my recent book: Adler S L 2004 Quantum Theory as an Emergent Phenomenon (Cambridge: Cambridge University Press). We first give motivations for considering the possibility that quantum mechanics is not exact, but is instead an accurate asymptotic approximation to a deeper level theory. For this deeper level, we propose a non-commutative generalization of classical mechanics, that we call "trace dynamics", and we give a brief survey of how it works, considering for simplicity only the bosonic case. We then discuss the statistical mechanics of trace dynamics and give our argument that with suitable approximations, the Ward identities for trace dynamics imply that ensemble averages in the canonical ensemble correspond to Wightman functions in quantum field theory. Thus, quantum theory emerges as the statistical thermodynamics of trace dynamics. Finally, we argue that Brownian motion corrections to this thermodynamics lead to stochastic corrections to the Schrödinger equation, of the type that have been much studied in the "continuous spontaneous localization" model of objective state vector reduction. In appendices to the talk, we give details of the existence of a conserved operator in trace dynamics that encodes the structure of the canonical algebra, of the derivation of the Ward identities, and of the proof that the stochastically-modified Schrödinger equation leads to state vector reduction with Born rule probabilities.

Classical, Quantum and Superquantum Correlations

NASA Astrophysics Data System (ADS)

Ghirardi, Giancarlo; Romano, Raffaele

2012-04-01

A deeper understanding of the origin of quantum correlations is expected to allow a better comprehension of the physical principles underlying quantum mechanics. In this work, we reconsider the possibility of devising "crypto-nonlocal theories", using a terminology firstly introduced by Leggett. We generalize and simplify the investigations on this subject which can be found in the literature. At their deeper level, such theories allow nonlocal correlations which can overcome the quantum limit.

Classical, Quantum and Superquantum Correlations

NASA Astrophysics Data System (ADS)

Ghirardi, Giancarlo; Romano, Raffaele

2013-01-01

A deeper understanding of the origin of quantum correlations is expected to allow a better comprehension of the physical principles underlying quantum mechanics. In this work, we reconsider the possibility of devising "crypto-nonlocal theories", using a terminology firstly introduced by Leggett. We generalize and simplify the investigations on this subject which can be found in the literature. At their deeper level, such theories allow nonlocal correlations which can overcome the quantum limit.

Let's Get Real: Deeper Learning and the Power of the Workplace. Deeper Learning Research Series. Executive Summary

ERIC Educational Resources Information Center

Hoffman, Nancy

2015-01-01

In the United States, we tend to assume that young people should become educated and then go to work, as though the two were entirely separate stages of life. This dichotomy blinds us to the fact that work itself can be a powerful means of education. Indeed, the workplace is where many young people become most engaged in learning high-level skills…

Thickness and Lower Limit Seismogenic Layer within the Crust beneath Japanese Islands on the Japan Sea Side

NASA Astrophysics Data System (ADS)

Matsubara, M.; Sato, H.

2015-12-01

1. Introduction I investigate the depth of the seismogenic layer in order to estimate the lower limit of the seismogenic fault plane since this depth is related to the size of the earthquake caused by the active fault. I have indexes D10 and D90 as the upper and lower limits of the seismogenic layer defined as the depth above which 10 % and 90 % of the whole crustal earthquakes occurred from the surface, respectively. The difference between the D10 and D90 is the thickness of the seismogenic layer. 2. Data and method The NIED Hi-net has a catalog of hypocenters determined with one-dimensional　velocity (1D) structure (Ukawa et al., 1984) and I estimated the D10 and D90 with this catalog at first. I construct the system to relocate the hypocenters from 2001 to 2013 with magnitude greater than 1.5 on the Japan Sea side shallower than 50 km depth with the three-dimensional velocity (3D) structure (Matsubara and Obara, 2011) obtained by seismic tomography. I estimate the D10 and D90 from the hypocenter catalog with 3D structure. 3. Result Many earthquakes shallower than 5 km with 1D structure are relocated to deeper with 3D structure and the earthquakes deeper than 15 km are relocated to about 5 km shallower. With 3D structure D10 deepens and D90 shallows from 1D structure. D90 beneath the northern Honshu is deeper than the other area and D90 beneath the Japan Sea is much deeper than the inland area. The thickness of the seismogenic layer beneath the Japan Sea is also thick from 8-16 km. D90 on the Japan Sea side of the southwestern Japan on the west side of the Itoigawa Shizuoka Tectonic Line is very shallow as 11-16 km and the thickness of the seismogenic layer is also thin as 2-7 km. 4. Discussion Omuralieva et al. (2012) relocated the JMA unified hypocenters with 3D structure and estimated shallower D90 than that from the JMA catalog. Very deep D90 beneath the northern Hokkaido and northern Honshu is consistent with our result. 5. Conclusion Using 3D velocity structure D10 deepens, D90 shallows, and the thickness of the seismogenic layer becomes thinner. The thickness of the seismogenic layer is thick beneath the northern Honshu, however, that is very thin beneath southwestern Japan on the Japan Sea side.

Analytical Models of Exoplanetary Atmospheres. V. Non-gray Thermal Structure with Coherent Scattering

NASA Astrophysics Data System (ADS)

Mohandas, Gopakumar; Pessah, Martin E.; Heng, Kevin

2018-05-01

We apply the picket fence treatment to model the effects brought about by spectral lines on the thermal structure of irradiated atmospheres. The lines may be due to pure absorption processes, pure coherent scattering processes, or some combination of absorption and scattering. If the lines arise as a pure absorption process, the surface layers of the atmosphere are cooler, whereas this surface cooling is completely absent if the lines are due to pure coherent isotropic scattering. The lines also lead to a warming of the deeper atmosphere. The warming of the deeper layers is, however, independent of the nature of line formation. Accounting for coherent isotropic scattering in the shortwave and longwave continuum results in anti-greenhouse cooling and greenhouse warming on an atmosphere-wide scale. The effects of coherent isotropic scattering in the line and continuum operate in tandem to determine the resulting thermal structure of the irradiated atmosphere.

Well network installation and hydrogeologic data collection, Assateague Island National Seashore, Worcester County, Maryland, 2010

USGS Publications Warehouse

Banks, William S.L.; Masterson, John P.; Johnson, Carole D.

2012-01-01

The U.S. Geological Survey, as part of its Climate and Land Use Change Research and Development Program, is conducting a multi-year investigation to assess potential impacts on the natural resources of Assateague Island National Seashore, Maryland that may result from changes in the hydrologic system in response to projected sea-level rise. As part of this effort, 26 monitoring wells were installed in pairs along five east-west trending transects. Each of the five transects has between two and four pairs of wells, consisting of a shallow well and a deeper well. The shallow well typically was installed several feet below the water table—usually in freshwater about 10 feet below land surface (ft bls)—to measure water-level changes in the shallow groundwater system. The deeper well was installed below the anticipated depth to the freshwater-saltwater interface—usually in saltwater about 45 to 55 ft bls—for the purpose of borehole geophysical logging to characterize local differences in lithology and salinity and to monitor tidal influences on groundwater. Four of the 13 shallow wells and 5 of the 13 deeper wells were instrumented with water-level recorders that collected water-level data at 15-minute intervals from August 12 through September 28, 2010. Data collected from these instrumented wells were compared with tide data collected north of Assateague Island at the Ocean City Inlet tide gage, and precipitation data collected by National Park Service staff on Assateague Island. These data indicate that precipitation events coupled with changes in ambient sea level had the largest effect on groundwater levels in all monitoring wells near the Atlantic Ocean and Chincoteague and Sinepuxent Bays, whereas precipitation events alone had the greatest impact on shallow groundwater levels near the center of the island. Daily and bi-monthly tidal cycles appeared to have minimal influence on groundwater levels throughout the island and the water-level changes that were observed appeared to vary among well sites, indicating that changes in lithology and salinity also may affect the response of water levels in the shallow and deeper groundwater systems throughout the island. Borehole geophysical logs were collected at each of the 13 deeper wells along the 5 transects. Electromagnetic induction logs were collected to identify changes in lithology; determine the approximate location of the freshwater-saltwater interface; and characterize the distribution of fresh and brackish water in the shallow aquifer, and the geometry of the fresh groundwater lens beneath the island. Natural gamma logs were collected to provide information on the geologic framework of the island including the presence and thickness of finer-grained deposits found in the subsurface throughout the island during previous investigations. Results of this investigation show the need for collection of continuous water-level data in both the shallow and deeper parts of the flow system and electromagnetic induction and natural gamma geophysical logging data to better understand the response of this groundwater system to changes in precipitation and tidal forcing. Hydrologic data collected as part of this investigation will serve as the foundation for the development of numerical flow models to assess the potential effects of climate change on the coastal groundwater system of Assateague Island.

Functional response of an adapted subtidal macrobenthic community to an oil spill: macrobenthic structure and bioturbation activity over time throughout an 18-month field experiment.

PubMed

Gilbert, Franck; Stora, Georges; Cuny, Philippe

2015-10-01

An experimental oil spill was carried out in order to assess in situ responses of a macrobenthic community of shallow subtidal sediments historically exposed to petroleum contamination. Both structural and functional (bioturbation activity) parameters of the community, subjected or not to a pulse acute contamination (25,000 ppm), were studied for 18 months. No difference in the community structure was detected between contaminated and control sediments, from 6 to 18 months of experimentation. Vertical distributions of organisms, however, were affected by the presence of oil contamination leading to a deeper burial of some polychaete species. In the same time, changes in sediment-reworking activity and more especially a deeper particle burying in sediments subjected to acute oil contamination were shown. These results highlight the need to complete the analysis of community structure by assessing functional aspects, such as bioturbation activity, a process integrating various aspects of benthic behaviour (e.g. feeding, locomotion, burrow building) in order to estimate real (structural and functional) and long-term effects of oil contamination on benthic communities.

Ore mineralogy and textural zonation in the world-class epithermal Waihi Vein System, Hauraki Goldfield

USGS Publications Warehouse

Mauk, Jeffrey L.; Skinner, Erin G; Fyfe, Sarah J; Menzies, Andrew H; Lowers, Heather A.; Koenig, Alan E.

2016-01-01

The Waihi district in the Hauraki Goldfield of New Zealand contains adularia-sericite epithermal gold-silver veins that have produced more than 7.7 Moz gold. The outermost veins of the district (Martha, Favona, Moonlight, and Cowshed) contain abundant colloform, cherty, and black quartz fill textures, with minor crustiform and massive quartz. The central veins (Amaranth, Trio, and Union) contain predominantly massive and crustiform textures, and these veins are also commonly coarser grained than outermost veins. Pyrite, sphalerite, galena, chalcopyrite, electrum, and acanthite occur in both outermost and central veins; base metal sulfide minerals typically increase in abundance in deeper samples. Antimony-, arsenic-, and selenium-bearing minerals are most abundant in the Favona and Moonlight veins, whereas base metal sulfide minerals are more abundant in the central veins at Correnso. Throughout the Waihi vein system, electrum is by far the most widespread, abundant, and significant gold-bearing mineral, but LA-ICP-MS analyses show that arsenian pyrite also contains some gold. Mineralogical and textural data are consistent with the central veins forming at a deeper structural level, or from hydrothermal fluids with different chemistry, or both.

Compound maar crater and co-eruptive scoria cone in the Lunar Crater Volcanic Field (Nevada, USA)

NASA Astrophysics Data System (ADS)

Amin, Jamal; Valentine, Greg A.

2017-06-01

Bea's Crater (Lunar Crater Volcanic Field, Nevada, USA) consists of two coalesced maar craters with diameters of 440 m and 1050 m, combined with a co-eruptive scoria cone that straddles the northeast rim of the larger crater. The two craters and the cone form an alignment that parallels many local and regional structures such as normal faults, and is interpreted to represent the orientation of the feeder dyke near the surface. The maar formed among a dense cluster of scoria cones; the cone-cluster topography resulted in crater rim that has a variable elevation. These older cones are composed of variably welded agglomerate and scoria with differing competence that subsequently affected the shape of Bea's Crater. Tephra ring deposits associated with phreatomagmatic maar-forming eruptions are rich in basaltic lithics derived from < 250 m depth, with variable contents of deeper-seated ignimbrite lithic clasts, consistent with ejection from relatively shallow explosions although a diatreme might extend to deeper levels beneath the maar. Interbedding of deposits on the northeastern cone and in the tephra ring record variations in the magmatic volatile driven and phreatomagmatic eruption styles in both space and time along a feeder dike.

[Effects of water storage in deeper soil layers on the root growth, root distribution and economic yield of cotton in arid area with drip irrigation under mulch].

PubMed

Luo, Hong-Hai; Zhang, Hong-Zhi; Zhang, Ya-Li; Zhang, Wang-Feng

2012-02-01

Taking cotton cultivar Xinluzao 13 as test material, a soil column culture expenment was conducted to study the effects of water storage in deeper (> 60 cm) soil layer on the root growth and its relations with the aboveground growth of the cultivar in arid area with drip irrigation under mulch. Two levels of water storage in 60-120 cm soil layer were installed, i. e., well-watered and no watering, and for each, the moisture content in 0-40 cm soil layer during growth period was controlled at two levels, i.e., 70% and 55% of field capacity. It was observed that the total root mass density of the cultivar and its root length density and root activity in 40-120 cm soil layer had significant positive correlations with the aboveground dry mass. When the moisture content in 0-40 cm soil layer during growth season was controlled at 70% of field capacity, the total root mass density under well-watered and no watering had less difference, but the root length density and root activity in 40-120 cm soil layer under well-watered condition increased, which enhanced the water consumption in deeper soil layer, increased the aboveground dry mass, and finally, led to an increased economic yield and higher water use efficiency. When the moisture content in 0-40 cm soil layer during growth season was controlled at 55% of field capacity and the deeper soil layer was well-watered, the root/shoot ratio and root length density in 40-120 cm soil layer and the root activity in 80-120 cm soil layer were higher, the water consumption in deeper soil layer increased, but it was still failed to adequately compensate for the negative effects of water deficit during growth season on the impaired growth of roots and aboveground parts, leading to a significant decrease in the economic yield, as compared with that at 70% of field capacity. Overall, sufficient water storage in deeper soil layer and a sustained soil moisture level of 65% -75% of field capacity during growth period could promote the downward growth of cotton roots, which was essential for achieving water-saving and high-yielding cultivation of cotton with drip irrigation under mulch.

Extraneous Perceptual Information Interferes with Children's Acquisition of Mathematical Knowledge

ERIC Educational Resources Information Center

Kaminski, Jennifer A.; Sloutsky, Vladimir M.

2013-01-01

Educational material often includes engaging perceptual information. However, this perceptual information is often extraneous and may compete with the deeper to-be-learned structure, consequently hindering either the learning of relevant structure or its transfer to new situations. This hypothesis was tested in 4 experiments in which 6- to…

Temporal dynamics of fish communities on an exposed shoreline in Hawaii

USGS Publications Warehouse

Friedlander, A.M.; Parrish, J.D.

1998-01-01

Environmental conditions on higher latitude coral reefs can be extremely variable, and may structure fish communities in ways not previously observed in the more stable, low latitude locations where communities have usually been studied. Temporal changes in fish community structure were examined in an intensive two-year study of the reef fishes of Hanalei Bay, Kauai, Hawaii. Hanalei Bay is directly exposed to winter swells with high surf, as well as frequent heavy winter rainfall and high river discharge. Twenty-two transects (25 x 5 m) were established in a wide variety of habitats and censused monthly (N = 1052 censuses). Over 121 000 sightings of individuals from 150 species were made during the study. Seasonal patterns in number of species, number of individuals, species diversity, and evenness were observed, with winter values usually lowest. Values of these ensemble variables tended to be higher at deeper sites and at sites with greater habitat complexity. Surf height and degree of wave exposure were negatively correlated with several measures of community organization. Groups of fishes with different levels of spatial mobility tended to occupy depths consistent with their various abilities to respond to events of heavy weather. The rank abundance of fish taxa tended to be more stable seasonally at sites with less exposure to high wave energy. These seasonal effects may suggest some type of short-range movement from more exposed and monotypic habitats to locations that are deeper or otherwise provide refuge from seasonally heavy seas.

Relative Packing Groups in Template-Based Structure Prediction: Cooperative Effects of True Positive Constraints

PubMed Central

Day, Ryan; Qu, Xiaotao; Swanson, Rosemarie; Bohannan, Zach; Bliss, Robert

2011-01-01

Abstract Most current template-based structure prediction methods concentrate on finding the correct backbone conformation and then packing sidechains within that backbone. Our packing-based method derives distance constraints from conserved relative packing groups (RPGs). In our refinement approach, the RPGs provide a level of resolution that restrains global topology while allowing conformational sampling. In this study, we test our template-based structure prediction method using 51 prediction units from CASP7 experiments. RPG-based constraints are able to substantially improve approximately two-thirds of starting templates. Upon deeper investigation, we find that true positive spatial constraints, especially those non-local in sequence, derived from the RPGs were important to building nearer native models. Surprisingly, the fraction of incorrect or false positive constraints does not strongly influence the quality of the final candidate. This result indicates that our RPG-based true positive constraints sample the self-consistent, cooperative interactions of the native structure. The lack of such reinforcing cooperativity explains the weaker effect of false positive constraints. Generally, these findings are encouraging indications that RPGs will improve template-based structure prediction. PMID:21210729

Acclimatization of symbiotic corals to mesophotic light environments through wavelength transformation by fluorescent protein pigments

PubMed Central

D'Angelo, Cecilia; Sharon, Yoni; Tchernov, Dan; Wiedenmann, Joerg

2017-01-01

The depth distribution of reef-building corals exposes their photosynthetic symbionts of the genus Symbiodinium to extreme gradients in the intensity and spectral quality of the ambient light environment. Characterizing the mechanisms used by the coral holobiont to respond to the low intensity and reduced spectral composition of the light environment in deeper reefs (greater than 20 m) is fundamental to our understanding of the functioning and structure of reefs across depth gradients. Here, we demonstrate that host pigments, specifically photoconvertible red fluorescent proteins (pcRFPs), can promote coral adaptation/acclimatization to deeper-water light environments by transforming the prevalent blue light into orange-red light, which can penetrate deeper within zooxanthellae-containing tissues; this facilitates a more homogeneous distribution of photons across symbiont communities. The ecological importance of pcRFPs in deeper reefs is supported by the increasing proportion of red fluorescent corals with depth (measured down to 45 m) and increased survival of colour morphs with strong expression of pcRFPs in long-term light manipulation experiments. In addition to screening by host pigments from high light intensities in shallow water, the spectral transformation observed in deeper-water corals highlights the importance of GFP-like protein expression as an ecological mechanism to support the functioning of the coral–Symbiodinium association across steep environmental gradients. PMID:28679724

Acclimatization of symbiotic corals to mesophotic light environments through wavelength transformation by fluorescent protein pigments.

PubMed

Smith, Edward G; D'Angelo, Cecilia; Sharon, Yoni; Tchernov, Dan; Wiedenmann, Joerg

2017-07-12

The depth distribution of reef-building corals exposes their photosynthetic symbionts of the genus Symbiodinium to extreme gradients in the intensity and spectral quality of the ambient light environment. Characterizing the mechanisms used by the coral holobiont to respond to the low intensity and reduced spectral composition of the light environment in deeper reefs (greater than 20 m) is fundamental to our understanding of the functioning and structure of reefs across depth gradients. Here, we demonstrate that host pigments, specifically photoconvertible red fluorescent proteins (pcRFPs), can promote coral adaptation/acclimatization to deeper-water light environments by transforming the prevalent blue light into orange-red light, which can penetrate deeper within zooxanthellae-containing tissues; this facilitates a more homogeneous distribution of photons across symbiont communities. The ecological importance of pcRFPs in deeper reefs is supported by the increasing proportion of red fluorescent corals with depth (measured down to 45 m) and increased survival of colour morphs with strong expression of pcRFPs in long-term light manipulation experiments. In addition to screening by host pigments from high light intensities in shallow water, the spectral transformation observed in deeper-water corals highlights the importance of GFP-like protein expression as an ecological mechanism to support the functioning of the coral- Symbiodinium association across steep environmental gradients. © 2017 The Authors.

Phylogenetic composition of host plant communities drives plant-herbivore food web structure.

PubMed

Volf, Martin; Pyszko, Petr; Abe, Tomokazu; Libra, Martin; Kotásková, Nela; Šigut, Martin; Kumar, Rajesh; Kaman, Ondřej; Butterill, Philip T; Šipoš, Jan; Abe, Haruka; Fukushima, Hiroaki; Drozd, Pavel; Kamata, Naoto; Murakami, Masashi; Novotny, Vojtech

2017-05-01

Insects tend to feed on related hosts. The phylogenetic composition of host plant communities thus plays a prominent role in determining insect specialization, food web structure, and diversity. Previous studies showed a high preference of insect herbivores for congeneric and confamilial hosts suggesting that some levels of host plant relationships may play more prominent role that others. We aim to quantify the effects of host phylogeny on the structure of quantitative plant-herbivore food webs. Further, we identify specific patterns in three insect guilds with different life histories and discuss the role of host plant phylogeny in maintaining their diversity. We studied herbivore assemblages in three temperate forests in Japan and the Czech Republic. Sampling from a canopy crane, a cherry picker and felled trees allowed a complete census of plant-herbivore interactions within three 0·1 ha plots for leaf chewing larvae, miners, and gallers. We analyzed the effects of host phylogeny by comparing the observed food webs with randomized models of host selection. Larval leaf chewers exhibited high generality at all three sites, whereas gallers and miners were almost exclusively monophagous. Leaf chewer generality dropped rapidly when older host lineages (5-80 myr) were collated into a single lineage but only decreased slightly when the most closely related congeneric hosts were collated. This shows that leaf chewer generality has been maintained by feeding on confamilial hosts while only a few herbivores were shared between more distant plant lineages and, surprisingly, between some congeneric hosts. In contrast, miner and galler generality was maintained mainly by the terminal nodes of the host phylogeny and dropped immediately after collating congeneric hosts into single lineages. We show that not all levels of host plant phylogeny are equal in their effect on structuring plant-herbivore food webs. In the case of generalist guilds, it is the phylogeny of deeper plant lineages that drives the food web structure whereas the terminal relationships play minor roles. In contrast, the specialization and abundance of monophagous guilds are affected mainly by the terminal parts of the plant phylogeny and do not generally reflect deeper host phylogeny. © 2017 The Authors. Journal of Animal Ecology © 2017 British Ecological Society.

Control of syntectonic erosion and sedimentation on kinematic evolution of a multidecollement fold and thrust zone: Analogue modeling of folding in the southern subandean of Bolivia

NASA Astrophysics Data System (ADS)

Darnault, Romain; Callot, Jean-Paul; Ballard, Jean-François; Fraisse, Guillaume; Mengus, Jean-Marie; Ringenbach, Jean-Claude

2016-08-01

Several analogue modeling studies have been conducted during the past fifteen years with the aim to discuss the effects of sedimentation and erosion on Foreland Fold and Thrust Belt, among which a few have analyzed these processes at kilometric scale (Malavieille et al., 1993; Nalpas et al., 1999; Barrier et al., 2002; Pichot and Nalpas, 2009). The influence of syn-deformation sedimentation and erosion on the structural evolution of FFTB has been clearly demonstrated. Here, we propose to go further in this approach by the study of a more complex system with a double decollement level. The natural study case is the Bolivian sub-Andean thrust and fold belt, which present all the required criteria, such as the double decollement level. A set of analogue models performed under a CT-scan have been used to test the influence of several parameters on a fold and thrust belt system, among which: (i) the spatial variation of the sediment input, (ii) the spatial variation of the erosion rate, (iii) the relative distribution of sedimentation between foreland and hinterland. These experiments led to the following observations: 1. The upper decollement level acts as a decoupling level in case of increased sedimentation rate: it results in the verticalization of the shallower part (above the upper decollement level), while the deeper parts are not impacted. 2. Similarly, the increase of the erosion rate involves the uplift of the deeper part (below the upper decollement level), whereas the shallower parts are not impacted. 3. A high sedimentation rate in the foreland involves a fault and fold vergence reversal, followed by a back-thrusting of the shallower part. 4. A high sedimentation rate in the hinterland favours thrust development toward the foreland in the shallower parts.

Tertiary extension and mineral deposits, southwestern U.S.

USGS Publications Warehouse

Rehrig, William A.; Hardy, James.J.

1996-01-01

Starting in Las Vegas, we will traverse through many of the geometric elements and complexities of hanging wall deformation above the regional detachment systems of the Colorado River extensional terrane. We will study the interaction of normal faults as arranged in regional, crustal-scale mega-domains and the bounding structures that separate these tilt domains. As we progress through the classic Eldorado Mountains-Hoover Dam region, where many of the ideas of listric normal faulting were first popularized, we will see both the real rocks and the historic rationale for their deformation. By examining the listric versus domino models for normal faulting, we will utilize different geometric techniques for determining the depth to the detachment structures and percent extension. Continuing further south toward southernmost Nevada, we will cross the accommodation zone that separates the Lake Mead and Whipple dip domains and further descend to deeper structural levels to examine lower levels of the major normal faults and their tilting of upper-crustal blocks and associated offset along the regional detachment faults. Fluid flow within the shattered fault zones and its relationship to the 3-D geometries of the fault surfaces will be studied both along the faults and within the hydrothermally altered and mineralized wallrocks.

Interfacial chemical and electronic structure of cobalt deposition on 2,7-dioctyl[1]benzothieno[3,2-b]benzothiophene (C8-BTBT)

NASA Astrophysics Data System (ADS)

Zhu, Menglong; Lyu, Lu; Niu, Dongmei; Zhang, Hong; Zhang, Yuhe; Liu, Peng; Gao, Yongli

2017-04-01

Interfacial chemical and electronic structure of Co deposition on 2,7-dioctyl[1]benzothieno[3,2-b]benzothiophene(C8-BTBT) was investigated by ultraviolet photoemission spectroscopy (UPS) and X-ray photoemission spectroscopy (XPS). Chemical reaction of cobalt with C8-BTBT at the interface is confirmed by a new component of S 2s peak which is electron-rich compared to the original one of C8-BTBT molecules. Intensity evolution of the core level in XPS indicates that the adsorption of Co atoms is mainly at the surface without deeper diffusion into C8-BTBT layer. Initial deposition of Co atoms downward shifts the core levels of C8-BTBT by electron transfer from isolated Co atoms or clusters to the C8-BTBT. Further deposition of Co upward shifts the core levels of C8-BTBT because of the neutralization of the thicker metal Co film. Our investigation suggests an inert buffer layer inserted to protect organic layer from reaction or decomposition and to lower the carrier barriers for both the electron and hole to improve the performance of Co/C8-BTBT-based OFETs.

Using the Tools and Resources of the RCSB Protein Data Bank.

PubMed

Costanzo, Luigi Di; Ghosh, Sutapa; Zardecki, Christine; Burley, Stephen K

2016-09-07

The Protein Data Bank (PDB) archive is the worldwide repository of experimentally determined three-dimensional structures of large biological molecules found in all three kingdoms of life. Atomic-level structures of these proteins, nucleic acids, and complex assemblies thereof are central to research and education in molecular, cellular, and organismal biology, biochemistry, biophysics, materials science, bioengineering, ecology, and medicine. Several types of information are associated with each PDB archival entry, including atomic coordinates, primary experimental data, polymer sequence(s), and summary metadata. The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) serves as the U.S. data center for the PDB, distributing archival data and supporting both simple and complex queries that return results. These data can be freely downloaded, analyzed, and visualized using RCSB PDB tools and resources to gain a deeper understanding of fundamental biological processes, molecular evolution, human health and disease, and drug discovery. © 2016 by John Wiley & Sons, Inc. Copyright © 2016 John Wiley & Sons, Inc.

Hydrothermal-electrochemical growth of heterogeneous ZnO: Co films

NASA Astrophysics Data System (ADS)

Yilmaz, Ceren; Unal, Ugur

2017-10-01

This study demonstrates the preparation of heterogeneous ZnO: Co nanostructures via hydrothermal-electrochemical deposition at 130 °C and -1.1 V (vs Ag/AgCl (satd)) in dimethyl sulfoxide (DMSO)-H2O mixture. Under the stated conditions, ZnO: Co nanostructures grow preferentially along (002) direction. Strength of directional growth progressively increases with the increasing concentration of Co(II) in the deposition bath. Films are composed of hexagonal Wurtzite ZnO, metallic cobalt, and mixed cobalt oxide on the surface and cobalt(II) oxide in deeper levels. Increasing the Co(II) concentration in the deposition bath results in different morphological features as well as phase separation. Platelets, sponge-like structures, cobalt-rich spheres, microislands of cobalt-rich spheres which are interconnected by ZnO network can be synthesized by adjusting [Co(II)]: [Zn(II)] ratio. Growth mechanisms giving rise to these particular structures, surface morphology, crystal structure, phase purity, chemical binding characteristics, and optical properties of the deposits are discussed in detail.

Numerical Study on the Improvement of Oil Return Structure in Aero-Engine Bearing Chambers

NASA Astrophysics Data System (ADS)

Jingyu, Zhao; Yaguo, Lyv; Zhenxia, Liu; Guozhe, Ren

2018-03-01

Numerical study has been carried out to improve the unreasonable oil film accumulation and oil return effect of the bearing chamber. Ramp sump and eccentricity sump offtake structures are designed and improved, and oil-gas two-phase flow calculation model based on CLSVOF (coupled level set and volume of fluid) method is proposed. Based on the grid-independent analysis and verifying the rationality of numerical data, oil-gas movement mechanism and oil return characteristics for different scavenge offtakes are calculated and analyzed. Results show that both the ramp sump and eccentricity sump offtake structures have favorable effects on improving the local oil distribution such as recirculation and stripping, etc. at low rotation speeds and alleviating the rapid decline of scavenge efficiency at high rotation speeds. Meanwhile, the air shear force is the main reason for the rapid decline of scavenge efficiency, while the design of oil return sump makes for the oil discharge from the scavenge offtake, and the deeper the sump depth is, the better.

Normal morphogenesis of epithelial tissues and progression of epithelial tumors

PubMed Central

Wang, Chun-Chao; Jamal, Leen; Janes, Kevin A.

2011-01-01

Epithelial cells organize into various tissue architectures that largely maintain their structure throughout the life of an organism. For decades, the morphogenesis of epithelial tissues has fascinated scientists at the interface of cell, developmental, and molecular biology. Systems biology offers ways to combine knowledge from these disciplines by building integrative models that are quantitative and predictive. Can such models be useful for gaining a deeper understanding of epithelial morphogenesis? Here, we take inventory of some recurring themes in epithelial morphogenesis that systems approaches could strive to capture. Predictive understanding of morphogenesis at the systems level would prove especially valuable for diseases such as cancer, where epithelial tissue architecture is profoundly disrupted. PMID:21898857

Bacterial diversity in the oxygen minimum zone of the eastern tropical South Pacific.

PubMed

Stevens, Heike; Ulloa, Osvaldo

2008-05-01

The structure and diversity of bacterial communities associated with the oxygen minimum zone (OMZ) of the eastern tropical South Pacific was studied through phylogenetic analysis. Clone libraries of 16S rRNA gene fragments were constructed using environmental DNA collected from the OMZ (60 m and 200 m), the sea surface (10 m), and the deep oxycline (450 m). At the class level, the majority of sequences affiliated to the gamma- (53.7%) and alpha-Proteobacteria (19.7%), and to the Bacteroidetes (11.2%). A vertical partitioning of the bacterial communities was observed, with main differences between the suboxic OMZ and the more oxygenated surface and deep oxycline waters. At the surface, the microbial community was predominantly characterized by SAR86, Loktanella and unclassified Flavobacteriaceae, whereas the deeper layer was dominated by Sulfitobacter and unclassified Alteromonadaceae. In the OMZ, major constituents affiliated to the marine SAR11 clade and to thiotrophic gamma-symbionts (25% of all sequences), a group not commonly found in pelagic waters. Sequences affiliating to the phylum Chloroflexi, to the AGG47 and SAR202 clades, to the delta-Proteobacteria, to the Acidobacteria, and to the 'anammox group' of the Planctomycetes were found exclusively in the OMZ. The bacterial richness in the OMZ was higher than in the oxic surface and deeper oxycline, as revealed by rarefaction analysis and the Chao1 richness estimator (surface: 45 +/- 8, deeper oxycline: 76 +/- 26; OMZ (60 m): 97 +/- 33, OMZ (200 m): 109 +/- 31). OMZ bacterial diversity indices (Fisher's: approximately 30 +/- 5, Shannon's: approximately 3.31, inverse Simpson's: approximately 20) were similar to those found in other pelagic marine environments. Thus, our results indicate a distinct and diverse bacterial community within the OMZ, with presumably novel and yet uncultivated bacterial lineages.

Complete protein-protein association kinetics in atomic detail revealed by molecular dynamics simulations and Markov modelling

NASA Astrophysics Data System (ADS)

Plattner, Nuria; Doerr, Stefan; de Fabritiis, Gianni; Noé, Frank

2017-10-01

Protein-protein association is fundamental to many life processes. However, a microscopic model describing the structures and kinetics during association and dissociation is lacking on account of the long lifetimes of associated states, which have prevented efficient sampling by direct molecular dynamics (MD) simulations. Here we demonstrate protein-protein association and dissociation in atomistic resolution for the ribonuclease barnase and its inhibitor barstar by combining adaptive high-throughput MD simulations and hidden Markov modelling. The model reveals experimentally consistent intermediate structures, energetics and kinetics on timescales from microseconds to hours. A variety of flexibly attached intermediates and misbound states funnel down to a transition state and a native basin consisting of the loosely bound near-native state and the tightly bound crystallographic state. These results offer a deeper level of insight into macromolecular recognition and our approach opens the door for understanding and manipulating a wide range of macromolecular association processes.

Interaction of tachykinins with phospholipid membranes: A neutron diffraction study

NASA Astrophysics Data System (ADS)

Darkes, Malcolm J. M.; Davies, Sarah M. A.; Bradshaw, Jeremy P.

Tachykinins are a group of peptides which bind to G-protein-coupled receptors. Receptor affinity appears to depend on different secondary structures of tachykinin which share the same hydrophobic carboxy-terminal sequence, FXGLM. Receptor activation is thought to be due to the carboxy-terminal submerging into the bilayer and the amino-terminal binding on the surface. Binding of tachykinins to phospholipid bilayers may take place both on the aqueous membrane surface and in the hydrophobic region. The two-state equilibrium appears to depend on the surface charge of the membrane. Deuterating substance P and neurokinin A at their carboxy-terminals, our results show two populations of label for each peptide. One is very close to the water-hydrocarbon interface, the other some 13 Å deeper. We report that the bilayer location of the two tachykinins is remarkably similar, thereby inferring that receptor specifity must be controlled by finer levels of structure.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Kun; Bannister, Mark E.; Meyer, Fred W.

Here, in a magnetic fusion energy (MFE) device, the plasma-facing materials (PFMs) will be subjected to tremendous fluxes of ions, heat, and neutrons. The response of PFMs to the fusion environment is still not well defined. Tungsten metal is the present candidate of choice for PFM applications such as the divertor in ITER. However, tungsten's microstructure will evolve in service, possibly to include recrystallization. How tungsten's response to plasma exposure evolves with changes in microstructure is presently unknown. In this work, we have exposed hot-worked and recrystallized tungsten to an 80 eV helium ion beam at a temperature of 900more » °C to fluences of 2 × 10 23 or 20 × 10 23 He/m 2. This resulted in a faceted surface structure at the lower fluence or short but well-developed nanofuzz structure at the higher fluence. There was little difference in the hot-rolled or recrystallized material's near-surface (≤50 nm) bubbles at either fluence. At higher fluence and deeper depth, the bubble populations of the hot-rolled and recrystallized were different, the recrystallized being larger and deeper. This may explain previous high-fluence results showing pronounced differences in recrystallized material. The deeper penetration in recrystallized material also implies that grain boundaries are traps, rather than high-diffusivity paths.« less

Crystallographic and optical properties and band diagrams of CuGaS2 and CuGa5S8 phases in Cu-poor Cu2S-Ga2S3 pseudo-binary system

NASA Astrophysics Data System (ADS)

Maeda, Tsuyoshi; Yu, Ying; Chen, Qing; Ueda, Kenta; Wada, Takahiro

2017-04-01

We synthesized Cu-poor Cu-Ga-S samples such, as CuGaS2 and CuGa5S8 with the composition of (1 - x)Cu2S-(x)Ga2S3 with 0.5 ≤ x ≤ 1.0, by a mechanochemical process and sequential heating. The crystal structure changes from tetragonal chalcopyrite-type CuGaS2 (0.5 ≤ x ≤ 0.55) to tetragonal stannite-type CuGa5S8 (x = 0.8). For samples with 0.60 ≤ x ≤ 0.75, the diffraction peaks were identified to be those of a mixed phase of the chalcopyrite- and stannite-type structures. The band-gap energies of Cu-poor Cu-Ga-S samples increase in a stepwise manner with increasing x. The band-gap energy of CuGa5S8 (x = 0.8) with the tetragonal stannite-type structure is approximately 2.66 eV, which is wider than that of chalcopyrite-type CuGaS2 (2.45 eV). The energy levels of valence band maxima (VBMs) were estimated from the ionization energies measured by photoemission yield spectroscopy (PYS). The energy levels of the VBM and conduction band minimum (CBM) of the Cu-poor Cu-Ga-S samples decrease significantly with increasing x (decreasing Cu/Ga ratio). The energy level of the VBM of CuGaS2 (-5.8 eV) is considerably deeper than those of CuInSe2 (-5.2 eV) and CuInS2 (-5.5 eV). The VBM of stannite-type CuGa5S8 with x = 0.8 (-6.4 eV) is much deeper than that of chalcopyrite-type CuGaS2 (-5.8 eV) and stannite-type CuIn3Se5 (-5.6 eV). In order to understand the band structures of chalcopyrite-type CuGaS2 and stannite-type CuGa5S8, we performed first-principles calculations using the Heyd-Scuseria-Ernzerhof (HSE06), nonlocal screened hybrid density functional method. The theoretical band-gap energy of stannite-type CuGa5S8 (2.2 eV) is wider than that of chalcopyrite-type CuGaS2 (2.0 eV). Both the theoretical and experimental band gaps of stannite-type CuGa5S8 are about 0.2 eV wider than those of chalcopyrite-type CuGaS2.

Depth-Related Changes in Community Structure of Culturable Mineral Weathering Bacteria and in Weathering Patterns Caused by Them along Two Contrasting Soil Profiles

PubMed Central

Huang, Jing; Xi, Jun; Huang, Zhi; Wang, Qi; Zhang, Zhen-Dong

2014-01-01

Bacteria play important roles in mineral weathering and soil formation. However, few reports of mineral weathering bacteria inhabiting subsurfaces of soil profiles have been published, raising the question of whether the subsurface weathering bacteria are fundamentally distinct from those in surface communities. To address this question, we isolated and characterized mineral weathering bacteria from two contrasting soil profiles with respect to their role in the weathering pattern evolution, their place in the community structure, and their depth-related changes in these two soil profiles. The effectiveness and pattern of bacterial mineral weathering were different in the two profiles and among the horizons within the respective profiles. The abundance of highly effective mineral weathering bacteria in the Changshu profile was significantly greater in the deepest horizon than in the upper horizons, whereas in the Yanting profile it was significantly greater in the upper horizons than in the deeper horizons. Most of the mineral weathering bacteria from the upper horizons of the Changshu profile and from the deeper horizons of the Yanting profile significantly acidified the culture media in the mineral weathering process. The proportion of siderophore-producing bacteria in the Changshu profile was similar in all horizons except in the Bg2 horizon, whereas the proportion of siderophore-producing bacteria in the Yanting profile was higher in the upper horizons than in the deeper horizons. Both profiles existed in different highly depth-specific culturable mineral weathering community structures. The depth-related changes in culturable weathering communities were primarily attributable to minor bacterial groups rather than to a change in the major population structure. PMID:24077700

Community structures and activity of denitrifying microbes in a forested catchment in central Japan: survey using nitrite reductase genes

NASA Astrophysics Data System (ADS)

Ohte, N.; Aoki, M.; Katsuyama, C.; Suwa, Y.; Tange, T.

2012-12-01

To elucidate the mechanisms of denitrification processes in the forested catchment, microbial ecological approaches have been applied in an experimental watershed that has previously investigated its hydrological processes. The study catchment is located in the Chiba prefecture in central Japan under the temperate Asian monsoon climate. Potential activities of denitrification of soil samples were measured by incubation experiments under anoxic condition associated with Na15NO3 addition. Existence and variety of microbes having nitrite reductase genes were investigated by PCR amplification, cloning and sequencings of nirK and nirS fragments after DNA extraction. Contrary to our early expectation that the potential denitrification activity was higher at deeper soil horizon with consistent groundwater residence than that in the surface soil, denitrification potential was higher in shallower soil horizons than deeper soils. This suggested that the deficiency of NO3- as a respiratory substrate for denitrifier occurred in deeper soils especially in the summer. However, high denitrification activity and presence of microbes having nirK and nirS in surface soils usually under aerobic condition was explainable by the fact that the majority of denitrifying bacteria have been recognized as a facultative anaerobic bacterium. This also suggests the possibility of that denitrification occurs even in the surface soils if the wet condition is provided by rainwater during and after a storm event. Community structures of microbes having nirK were different between near surface and deeper soil horizons, and ones having nirS was different between saturated zone (under groundwater table) and unsaturated soil horizons. These imply that microbial communities with nisK are sensitive to the concentration of soil organic matters and ones with nirS is sensitive to soil moisture contents.

Impact of absorption in the top layer of a two layer sample on spectroscopic spectral domain interferometry of the bottom layer

NASA Astrophysics Data System (ADS)

Fleischhauer, F.; Feuchter, T.; Leick, L.; Rajendram, R.; Podoleanu, A.

2018-03-01

Spectroscopic spectral domain interferometry and spectroscopic optical coherence tomography combine depth information with spectrally-resolved localised absorption data. These additional data can improve diagnostics by giving access to functional information of the investigated sample. One possible application is measuring oxygenation levels at the retina for earlier detection of several eye diseases. Here measurements with different hollow glass tube phantoms are shown to measure the impact of a superficial absorbing layer on the precision of reconstructed attenuation spectra of a deeper layer. Measurements show that a superficial absorber has no impact on the reconstructed absorption spectrum of the deeper absorber. Even when diluting the concentration of the deeper absorber so far that an incorrect absorption maximum is obtained, still no influence of the superficially placed absorber is identified.

Retinotomy using an erbium:YAG laser on human autopsy eyes

NASA Astrophysics Data System (ADS)

Ellsworth, Lansing G.; Kramer, Theresa R.; Noecker, Robert J.; Snyder, Robert W.; Yarborough, J. Michael

1994-06-01

Mid-IR lasers that operate near the absorption peak of water have a short penetration depth in ocular tissues. Ablation of tissue can be accomplished with minimal coagulative damage to underlying structures. We used an erbium:YAG laser equipped with a contact probe to create retinotomy sites in the human retina of eye bank eyes. An erbium:YAG laser (2.94 micrometers ) equipped with an infrared transmitting glass fiber and a sapphire tip (400 micrometers ) was used to directly ablate the surface of the retina. We administered both single and multiple pulses to the macula and peripheral retina using energy levels from 4 to 16 mJ per pulse. The retinas were then examined histopathologically to evaluate the extent of ablation and coagulative damage. Single pulses at low energy levels were noted to cause ablative damage to the nerve fiber layer and ganglion cell layer without a notable coagulative effect. The mean ablation depth at lower energy levels was less than the mean ablation depth at higher energy levels. Extensive laser application produced disruption of the retinal pigment epithelium, choroid and sclera. the erbium:YAG laser equipped with a contact probe is an effective means of creating retinotomies in human autopsy eyes. When used in the single pulse mode at lower energy levels, the erbium:YAG laser appears capable of removing superficial retinal layers without damaging deeper structures.

Galileo Probe Doppler Residuals as the Wave-Dynamical Signature of Weakly Stable, Downward-Increasing Stratification in Jupiter's Deep Wind Layer

NASA Technical Reports Server (NTRS)

Allison, Michael; Atkinson, David H.; Hansen, James E. (Technical Monitor)

2001-01-01

Doppler radio tracking of the Galileo probe-to-orbiter relay, previously analyzed for its in situ measure of Jupiter's zonal wind at the equatorial entry site, also shows a record of significant residual fluctuations apparently indicative of varying vertical motions. Regular oscillations over pressure depth in the residual Doppler measurements of roughly 1-8 Hz (increasing upward), as filtered over a 134 sec window, are most plausibly interpreted as gravity waves, and imply a weak, but downward increasing static stability within the 5 - 20 bar region of Jupiter's atmosphere. A matched extension to deeper levels of an independent inertial stability constraint from the measured vertical wind shear at 1 - 4 bars is roughly consistent with a static stability of approximately 0.5 K/km near the 20 bar level, as independently detected by the probe Atmospheric Structure Instrument.

Electronic and spin structure of the wide-band-gap topological insulator: Nearly stoichiometric Bi2Te2S

NASA Astrophysics Data System (ADS)

Annese, E.; Okuda, T.; Schwier, E. F.; Iwasawa, H.; Shimada, K.; Natamane, M.; Taniguchi, M.; Rusinov, I. P.; Eremeev, S. V.; Kokh, K. A.; Golyashov, V. A.; Tereshchenko, O. E.; Chulkov, E. V.; Kimura, A.

2018-05-01

We have grown the phase-homogeneous ternary compound with composition Bi2Te1.85S1.15 very close to the stoichiometric Bi2Te2S . The measurements performed with spin- and angle-resolved photoelectron spectroscopy as well as density functional theory and G W calculations revealed a wide-band-gap three-dimensional topological insulator phase. The surface electronic spectrum is characterized by the topological surface state (TSS) with Dirac point located above the valence band and Fermi level lying in the band gap. TSS band dispersion and constant energy contour manifest a weak warping effect near the Fermi level along with in-plane and out-of-plane spin polarization along the Γ ¯-K ¯ line. We identified four additional states at deeper binding energies with high in-plane spin polarization.

Linking megathrust earthquakes to brittle deformation in a fossil accretionary complex

PubMed Central

Dielforder, Armin; Vollstaedt, Hauke; Vennemann, Torsten; Berger, Alfons; Herwegh, Marco

2015-01-01

Seismological data from recent subduction earthquakes suggest that megathrust earthquakes induce transient stress changes in the upper plate that shift accretionary wedges into an unstable state. These stress changes have, however, never been linked to geological structures preserved in fossil accretionary complexes. The importance of coseismically induced wedge failure has therefore remained largely elusive. Here we show that brittle faulting and vein formation in the palaeo-accretionary complex of the European Alps record stress changes generated by subduction-related earthquakes. Early veins formed at shallow levels by bedding-parallel shear during coseismic compression of the outer wedge. In contrast, subsequent vein formation occurred by normal faulting and extensional fracturing at deeper levels in response to coseismic extension of the inner wedge. Our study demonstrates how mineral veins can be used to reveal the dynamics of outer and inner wedges, which respond in opposite ways to megathrust earthquakes by compressional and extensional faulting, respectively. PMID:26105966

Vertical cloud structure of Uranus from UKIRT/UIST observations and changes seen during Northern Spring Equinox in 2007

NASA Astrophysics Data System (ADS)

Irwin, P. G. J.; Teanby, N. A.; Davis, G. R.

2008-09-01

Uranus has a very high obliquity of 98 degrees and a very small amount of residual internal heat left over from its formation. Hence, the circulation of its atmosphere is strongly affected by seasonal changes in solar irradiation. Uranus reached its northern spring equinox in December 2007 and at the planet's last equinox in 1965 there were indications of a substantial change in the planet's appearance. Ground-based instrumentation has improved dramatically since 1965 and thus there has been great international interest in monitoring the cloud structure of Uranus through this equinox period to monitor any rapid variations that may occur this time. New near-infrared spectra of Uranus were observed in August/September 2006 and in June 2007 using the UIST instrument on the United Kingdom Infrared Telescope (UKIRT). Spectra (in Long Slit mode) were recorded between 1 and 2.5 microns with the slit aligned with the planet's central meridian to determine any north-south variations of Uranus' cloud structure. In addition, context images were also recorded to note the position of discrete mid-latitude clouds to ensure that these were not confused with any general latitudinal variation (Fig. 1). We here present retrievals of the latitudinal variation of Uranus' vertical cloud structure from these data using an optimal estimation retrieval model, NEMESIS[1], together with new methane absorption coefficients[2] and a Matrix Operator multiple scattering model. Apart from some small storms at both southern and northern mid-latitudes, some reaching the 200 mbar pressure level, indicating vigorous convection, we find that the data are generally best fitted either with two cloud layers, one at ~2 - 3 bars and a second deeper cloud layer at ~8 bars, or alternatively by a single extended cloud spanning this pressure range (Fig. 2.). In the bright band at 45ºS we find that the opacity in the 2 -3 bar region is increased, while that deeper levels decreased slightly[3]. Comparing observations between the two years we find that the clouds in the 2 - 3 bar region cleared slightly in the southern hemisphere and thickened in the northern hemisphere. New UKIRT/UIST observations, scheduled for July 2008, should confirm these changes.

Abundance of Corals on Offshore Oil and Gas Platforms in the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Kolian, Stephan R.; Sammarco, Paul W.; Porter, Scott A.

2017-08-01

Scleractinian, octocoral, and antipatharian corals have colonized many of the offshore oil and gas platforms in the northern Gulf of Mexico. We surveyed 25 offshore oil and gas platforms for these cnidarians. Few to no corals were detected on inshore, shallow-water structures at <25 m depth; however, the abundance of corals increased, ranging from 14 to 194/m2, on platforms in waters deeper ≥25 m. The most common coral encountered were Tubastraea coccinea (Scleractinia) and Telesto spp. (Octocorallia). The data suggest that the offshore platforms located in waters of >25-30 m in the study area are often colonized by these corals. We recommend that structures located in deeper waters should be surveyed for coral and, if the populations are substantial, consider alternate uses for the retired platforms, and leaving them in place, when feasible.

Abundance of Corals on Offshore Oil and Gas Platforms in the Gulf of Mexico.

PubMed

Kolian, Stephan R; Sammarco, Paul W; Porter, Scott A

2017-08-01

Scleractinian, octocoral, and antipatharian corals have colonized many of the offshore oil and gas platforms in the northern Gulf of Mexico. We surveyed 25 offshore oil and gas platforms for these cnidarians. Few to no corals were detected on inshore, shallow-water structures at <25 m depth; however, the abundance of corals increased, ranging from 14 to 194/m 2 , on platforms in waters deeper ≥25 m. The most common coral encountered were Tubastraea coccinea (Scleractinia) and Telesto spp. (Octocorallia). The data suggest that the offshore platforms located in waters of >25-30 m in the study area are often colonized by these corals. We recommend that structures located in deeper waters should be surveyed for coral and, if the populations are substantial, consider alternate uses for the retired platforms, and leaving them in place, when feasible.

Structural and petrographic constraints on the stratigraphy of the Lapataia Formation, with implications for the tectonic evolution of the Fuegian Andes

NASA Astrophysics Data System (ADS)

Cao, Sebastián J.; Torres Carbonell, Pablo J.; Dimieri, Luis V.

2018-07-01

The structure of the Fuegian Andes central belt is characterized by a first phase of peak metamorphism and ductile deformation, followed by a brittle-ductile thrusting phase including juxtaposition of different (first phase) structural levels; both related to the closure and inversion of the Late Jurassic-Early Cretaceous Rocas Verdes basin. The second phase involved thrust sheets of pre-Jurassic basement, as well as Upper Jurassic and Lower Cretaceous units from the volcanic-sedimentary fill of the basin. Rock exposures in the Parque Nacional Tierra del Fuego reveal a diversity of metamorphic mineral assemblages, dynamic recrystallization grades and associated structures, evidencing a variety of protoliths and positions in the crust during their orogenic evolution. Among the units present in this sector, the Lapataia Formation portrays the higher metamorphic grade reported in the Argentine side of the Fuegian Andes, and since no precise radiometric ages have been established to date, its stratigraphic position remains a matter of debate: the discussion being whether it belongs to the pre-Jurassic basement, or the Upper Jurassic volcanic/volcaniclastic initial fill of the Rocas Verdes basin. The mapping and petrographic/microstructural study of the Lapataia Formation and those of undoubtedly Mesozoic age, allow to characterize the former as a group of rocks with great lithological affinity with the Upper Jurassic metamorphic rocks found elsewhere in the central belt of the Fuegian Andes. The main differences in metamorphic grade are indebted to its deformation at deeper crustal levels, but during the same stages than the Mesozoic rocks. Accordingly, we interpret the regional structure to be associated with the stacking of thrust sheets from different structural levels through the emplacement of a duplex system during the growth of the Fuegian Andes.

How many histological levels should be examined from tissue blocks originating in cone biopsy and large loop excision of the transformation zone specimens of cervix?

PubMed Central

Heatley, M

2001-01-01

Aims—To establish the value of examining additional histological levels in cone biopsy and large loop excision of the transformation zone (LLETZ) specimens of cervix. Methods—Three deeper levels were examined from 200 consecutive cone biopsy and LLETZ specimens reported by a single pathologist. Results—Examination of the first deeper level resulted in cervical intraepithelial neoplasia (CIN) being identified for the first time in five cases and in CIN1 being upgraded in five more. Invasive cancer was discovered in two cases that had shown high grade CIN initially. Conclusion—Examination of a single further level appears to be sufficient in those patients in whom a specimen is compromised because epithelium including the squamocolumnar junction is missing, or if there is a discrepancy between the histological findings and the preceding colposcopic or cytological history. If invasive disease is suspected on the basis of the cytological, colposcopic, or histological features, one or preferably two further levels should be examined. Key Words: cervix uteri • quality control • diagnosis PMID:11477125

P- and S- wave velocity structure in and around the Itoigawa-Shizuoka Tectonic Line (ISTL) fault system revealed by dense seismic array observations

NASA Astrophysics Data System (ADS)

Panayotopoulos, Y.; Hirata, N.; Sato, H.; Iwasaki, T.; Kato, A.; Imanishi, K.; Kuwahara, Y.; Cho, I.

2008-12-01

The ISTL is a major tectonic structure that divides the Japanese Island arc into northeast and southwest parts. It was formed as a normal fault in the early Miocene and represents the southwestern boundary of the northern Fossa Mangna rift basin to the north, and the boundary between the Japanese arc accretionary prism units and the Izu-Bonin arc crust to the south. Previous studies have provided the sallow structure of the different ISTL fault segments, but the detailed crustal structure along the ISTL is yet to be revealed. The online permanent seismic station network in the area is not sufficient to accurately locate the earthquakes occurring in the area and also not dense enough to provide a detailed structure of the earth's crust. Over the past 3 years we have installed temporary seismic stations along the STL. We have deployed 60 stations in the southern, 58 stations in the central and 60 stations in the northern ISTL regions. We have combined the data retrieved from the temporary stations with the data available from the online permanent stations in the ISTL area and manually re-picked 63,275 P- and 68,847 S- wave arrival times from 1,945 events from the 5th August 2003 to 31st December 2006. The Double Difference tomography method (Zhang and Thurber, 2003) was used in order to accurately relocate the hypocenters and obtain a 3D P- and S- wave velocity (Vp and Vs) structure beneath the ISTL fault system. The relocated hypocenters in the southern ISTL coincide with the deeper extension of the active faults in the area. The relocated hypocenters are deeper than those reported by the Japan Meteorological Agency (JMA) in the northern ISTL and shallower at the central and southern parts. The average depth of the hypocenters is shallower in the northern ISTL (3 - 8 km) and gets progressively deeper towards the central (8-15 km) and southern (15-25 km) ISTL. The tomographic analysis has provided a detailed Vp and Vs image of the crust in the area below the ISTL. The 3D velocity model that we have acquired of the crustal structure in the area is in accordance with the geological boundaries. The northern tomograms fit accurately with the deeper extension of the Matsumoto basin and the central uplift zone geological units. In the central ISTL, the Yatsugatake volcano magmatic conduit was imaged. In the southern ISTL, we imaged the downwards continuation of the low grade metamorphic rocks that constitute the Chichibu-Shimanto belts of the southwest acrretionary prism of the Japanese arc, and of the igneous rocks that form the Izu-Bonin arc crust.

Snapshot recordings provide a first description of the acoustic signatures of deeper habitats adjacent to coral reefs of Moorea.

PubMed

Bertucci, Frédéric; Parmentier, Eric; Berthe, Cécile; Besson, Marc; Hawkins, Anthony D; Aubin, Thierry; Lecchini, David

2017-01-01

Acoustic recording has been recognized as a valuable tool for non-intrusive monitoring of the marine environment, complementing traditional visual surveys. Acoustic surveys conducted on coral ecosystems have so far been restricted to barrier reefs and to shallow depths (10-30 m). Since they may provide refuge for coral reef organisms, the monitoring of outer reef slopes and describing of the soundscapes of deeper environment could provide insights into the characteristics of different biotopes of coral ecosystems. In this study, the acoustic features of four different habitats, with different topographies and substrates, located at different depths from 10 to 100 m, were recorded during day-time on the outer reef slope of the north Coast of Moorea Island (French Polynesia). Barrier reefs appeared to be the noisiest habitats whereas the average sound levels at other habitats decreased with their distance from the reef and with increasing depth. However, sound levels were higher than expected by propagation models, supporting that these habitats possess their own sound sources. While reef sounds are known to attract marine larvae, sounds from deeper habitats may then also have a non-negligible attractive potential, coming into play before the reef itself.

Anesthesia Practice and Clinical Trends in Interventional Radiology: A European Survey

DOE Office of Scientific and Technical Information (OSTI.GOV)

Haslam, Philip J.; Yap, Bernard; Mueller, Peter R.

Purpose: To determine current European practice in interventional radiology regarding nursing care, anesthesia, and clinical care trends.Methods: A survey was sent to 977 European interventional radiologists to assess the use of sedoanalgesia, nursing care, monitoring equipment, pre- and postprocedural care, and clinical trends in interventional radiology. Patterns of sedoanalgesia were recorded for both vascular and visceral interventional procedures. Responders rated their preferred level of sedoanalgesia for each procedure as follows: (a) awake/alert, (b) drowsy/arousable, (c) asleep/arousable, (d) deep sedation, and (e) general anesthesia. Sedoanalgesic drugs and patient care trends were also recorded. A comparison was performed with data derived frommore » a similar survey of interventional practice in the United States.Results: Two hundred and forty-three of 977 radiologists responded (25%). The total number of procedures analyzed was 210,194. The majority (56%) of diagnostic and therapeutic vascular procedures were performed at the awake/alert level of sedation, 32% were performed at the drowsy/arousable level, and 12% at deeper levels of sedation. The majority of visceral interventional procedures were performed at the drowsy/arousable level of sedation (41%), 29% were performed at deeper levels of sedation, and 30% at the awake/alert level. In general, more sedoanalgesia is used in the United States. Eighty-three percent of respondents reported the use of a full-time radiology nurse, 67% used routine blood pressure/pulse oximetry monitoring, and 46% reported the presence of a dedicated recovery area. Forty-nine percent reported daily patient rounds, 30% had inpatient hospital beds, and 51% had day case beds.Conclusion: This survey shows clear differences in the use of sedation for vascular and visceral interventional procedures. Many, often complex, procedures are performed at the awake/alert level of sedation in Europe, whereas deeper levels of sedation are used in the United States. Trends toward making interventional radiology a clinical specialty are evident, with 51% of respondents having day case beds, and 30% having inpatient beds.« less

Molecular Mechanisms and Modeling of Skin Irritation from JP-8

DTIC Science & Technology

2006-03-01

levels of performance than shallow levels of processing ( Craik & Lockhart , 1972). Deeper levels of processing focus on the meaning of...of group processes for decision- making. New York: John Wiley & Sons. Craik , F.I.M., & Lockhart , R.S. (1972). Levels of processing : A framework for...has been demonstrated to result in differential levels of memory performance ( Craik & Lockhart , 1972). If the objective is to store

The underlying structure of skin wrinkles: a hyperspectral approach to crows feet

NASA Astrophysics Data System (ADS)

Puccetti, G.

2017-02-01

Skin wrinkles are visually perceived by consumers but they are also known to possess an underlying structure not apparent at the surface of the skin. This underlying structure can be brought out by polarized hyperspectral imaging. Wrinkle patterns of eye crow's feet are used as example to show a deeper existing pattern and their characterization versus age on a group of volunteers. The skin inhomogeneity changes within each layer of the skin and can be observed in the shorter wavelength region of the spectrum, about 450nm to 500nm which are well suited to image skin surface inhomogeneities within the central and deep epidermis. Imaging in the 550nm range can serve as a larger scale topology reference because of its deeper penetration into the upper dermis. This serves to bring out the underlying wrinkle pattern as imprinted by collagen anisotropies around deep folds but unapparent to the eye yet. The approach has potential applications in evaluating the internal skin patterns non visible to the eye by mapping their spectral dispersion. This method has thus potentials to evaluate the extent of subsurface structures such as acne and other scars and thereby the efficacy of treatments.

Practice Report / Bericht aus der Praxis: Peer teaching: From method to philosophy.

PubMed

Ten Cate, Olle

2017-11-01

Peer teaching or peer-assisted learning is a popular topic in the medical education literature. While not one method of education, a categorization is possible according to (a) the developmental distance between learner and peer teacher, (b) the scale or group size of learners in peer teaching arrangements and (c) the extent of formality or structure of the arrangement. That yields many different forms of peer teaching. Viewing peer teaching as a multifaceted method shows several benefits. On a deeper level however peer teaching may be viewed as a philosophy of medical education that has historical roots but aligns well with current thinking of teaching and learning across the continuum of medical education. Copyright © 2017. Published by Elsevier GmbH.

Cytoplasmic vacuolization in cell death and survival

PubMed Central

Komissarov, Alexey A.; Rafieva, Lola M.; Kostrov, Sergey V.

2016-01-01

Cytoplasmic vacuolization (also called cytoplasmic vacuolation) is a well-known morphological phenomenon observed in mammalian cells after exposure to bacterial or viral pathogens as well as to various natural and artificial low-molecular-weight compounds. Vacuolization often accompanies cell death; however, its role in cell death processes remains unclear. This can be attributed to studying vacuolization at the level of morphology for many years. At the same time, new data on the molecular mechanisms of the vacuole formation and structure have become available. In addition, numerous examples of the association between vacuolization and previously unknown cell death types have been reported. Here, we review these data to make a deeper insight into the role of cytoplasmic vacuolization in cell death and survival. PMID:27331412

A favorable course of palliative sedation: searching for indicators using caregivers' perspectives.

PubMed

Brinkkemper, Tijn; Rietjens, Judith A C; Deliens, Luc; Ribbe, Miel W; Swart, Siebe J; Loer, Stephan A; Zuurmond, Wouter W A; Perez, Roberto S G M

2015-03-01

Comparing characteristics of a favorable sedation course during palliative sedation to a less favorable course based on the reports Dutch physicians and nurses. Cases identified as having a favorable sedation course less often concerned a male patient (P = .019 nurses' cases), reached the intended sedation depth significantly quicker (P < .05 both nurses and physicians' cases), reached a deeper level of sedation (P = .015 physicians' cases), and had a shorter total duration of sedation compared (P < .001 physicians' cases) to patients with a less favorable sedation course. A favorable course during palliative sedation seems more probable when health care professionals report on a (relatively) shorter time to reach the required depth of sedation and when a deeper level of sedation can be obtained. © The Author(s) 2013.

Estimation of Deeper Structure at the Soultz Hot Dry Rock Field by Means of Reflection Method Using 3C AE as Wave Source

NASA Astrophysics Data System (ADS)

Soma, N.; Niitsuma, H.; Baria, R.

1997-12-01

We investigate the deep subsurface structure below the artificial reservoir at the Soultz Hot Dry Rock (HDR) site in France by a reflection method which uses acoustic emission (AE) as a wave source. In this method, we can detect reflected waves by examining the linearity of a three-dimensional hodogram. Additionally for imaging a deep subsurface structure, we employ a three-dimensional inversion with a restriction of wave polarization angles and with a compensation for a heterogeneous source distribution.¶We analyzed 101 AE wave forms observed at the Soultz site during the hydraulic testing in 1993. Some deep reflectors were revealed by this method. The bottom of the artificial reservoir that is presumed from all of the AE locations in 1993 was delineated at the depth of about 3900 m as a reflector. Other deeper reflectors were detected below the reservoir, which would not have been detected using conventional methods. Furthermore these reflectors agreed with the results of the tri-axial drill-bit VSP (Asanuma et al., 1996).

Movement sense determination in sheared rocks

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simpson, C.

1985-01-01

Deformation within fault zones produces sheared rocks that range from cataclasites at high structural level, to mylonites and mylonitic gneiss at deeper levels. These rocks are easily recognized and mapped in the field and the strike and dip of the fault zone established. However, present-day geometry of the fault zone does not necessarily indicate relative motion - a zone dipping at 15/sup 0/ could represent a listric normal, thrust, oblique-slip or tilted strike-slip fault. Where offset stratigraphic or lithological markers are absent, the movement sense may be determined from meso- and micro-structural features within the sheared rocks. Of prime importancemore » is the orientation of mineral elongation or stretching lineations which record the finite X direction of strain in the rock; this direction approaches the bulk movement direction with increase in strain. At mesoscopic scale the most reliable shear sense indicators are shear bands and associated features. Use of fold vergence requires caution. On a micro-structural scale, shear bands, mica fish, microfolds, rotated grains, asymmetrical augen structure and fiber growth patterns all give reliable results. Thin sections should be cut parallel to lineation and perpendicular to foliation in order to view maximum rotational component. Asymmetry of crystallographic fabric patterns gives consistent results in zones of relatively simple movement history. For high confidence shear sense determination, all structural elements should be internally consistent. If inconsistency occurs this may indicate a complex, multidirectional movement history for the fault zone.« less

Electrical characterization and comparison of CIGS solar cells made with different structures and fabrication techniques

DOE PAGES

Garris, Rebekah L.; Johnston, Steven; Li, Jian V.; ...

2017-08-31

In a previous study, we reported on Cu(In,Ga)Se2-based (CIGS) solar cell samples collected from different research laboratories and industrial companies with the purpose of understanding the range of CIGS materials that can lead to high-quality and high-efficiency solar panels. Here, we report on electrical measurements of those same samples. Electron-beam induced current and time-resolved photoluminescence (TRPL) gave insights about the collection probability and the lifetime of carriers generated in each absorber. Capacitance and drive-level capacitance profiling revealed nonuniformity in carrier-density profiles. Admittance spectroscopy revealed small activation energies (= 0.03 eV) indicative of the inversion strength, larger activation energies (> 0.1more » eV) reflective of thermal activation of absorber conductivity and a deeper defect level. Deep-level transient spectroscopy (DLTS) probed deep hole-trapping defects and showed that all samples in this study had a majority-carrier defect with activation energy between 0.3 eV and 0.9 eV. Optical-DLTS revealed deep electron-trapping defects in several of the CIGS samples. This work focused on revealing similarities and differences between high-quality CIGS solar cells made with various structures and fabrication techniques.« less

Electrical characterization and comparison of CIGS solar cells made with different structures and fabrication techniques

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garris, Rebekah L.; Johnston, Steven; Li, Jian V.

In a previous study, we reported on Cu(In,Ga)Se2-based (CIGS) solar cell samples collected from different research laboratories and industrial companies with the purpose of understanding the range of CIGS materials that can lead to high-quality and high-efficiency solar panels. Here, we report on electrical measurements of those same samples. Electron-beam induced current and time-resolved photoluminescence (TRPL) gave insights about the collection probability and the lifetime of carriers generated in each absorber. Capacitance and drive-level capacitance profiling revealed nonuniformity in carrier-density profiles. Admittance spectroscopy revealed small activation energies (= 0.03 eV) indicative of the inversion strength, larger activation energies (> 0.1more » eV) reflective of thermal activation of absorber conductivity and a deeper defect level. Deep-level transient spectroscopy (DLTS) probed deep hole-trapping defects and showed that all samples in this study had a majority-carrier defect with activation energy between 0.3 eV and 0.9 eV. Optical-DLTS revealed deep electron-trapping defects in several of the CIGS samples. This work focused on revealing similarities and differences between high-quality CIGS solar cells made with various structures and fabrication techniques.« less

Structural and functional correlates of hypnotic depth and suggestibility.

PubMed

McGeown, William Jonathan; Mazzoni, Giuliana; Vannucci, Manila; Venneri, Annalena

2015-02-28

This study explores whether self-reported depth of hypnosis and hypnotic suggestibility are associated with individual differences in neuroanatomy and/or levels of functional connectivity. Twenty-nine people varying in suggestibility were recruited and underwent structural, and after a hypnotic induction, functional magnetic resonance imaging at rest. We used voxel-based morphometry to assess the correlation of grey matter (GM) and white matter (WM) against the independent variables: depth of hypnosis, level of relaxation and hypnotic suggestibility. Functional networks identified with independent components analysis were regressed with the independent variables. Hypnotic depth ratings were positively correlated with GM volume in the frontal cortex and the anterior cingulate cortex (ACC). Hypnotic suggestibility was positively correlated with GM volume in the left temporal-occipital cortex. Relaxation ratings did not correlate significantly with GM volume and none of the independent variables correlated with regional WM volume measures. Self-reported deeper levels of hypnosis were associated with less connectivity within the anterior default mode network. Taken together, the results suggest that the greater GM volume in the medial frontal cortex and ACC, and lower connectivity in the DMN during hypnosis facilitate experiences of greater hypnotic depth. The patterns of results suggest that hypnotic depth and hypnotic suggestibility should not be considered synonyms. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Effect of starting microstructure on helium plasma-materials interaction in tungsten

DOE PAGES

Wang, Kun; Bannister, Mark E.; Meyer, Fred W.; ...

2016-11-24

Here, in a magnetic fusion energy (MFE) device, the plasma-facing materials (PFMs) will be subjected to tremendous fluxes of ions, heat, and neutrons. The response of PFMs to the fusion environment is still not well defined. Tungsten metal is the present candidate of choice for PFM applications such as the divertor in ITER. However, tungsten's microstructure will evolve in service, possibly to include recrystallization. How tungsten's response to plasma exposure evolves with changes in microstructure is presently unknown. In this work, we have exposed hot-worked and recrystallized tungsten to an 80 eV helium ion beam at a temperature of 900more » °C to fluences of 2 × 10 23 or 20 × 10 23 He/m 2. This resulted in a faceted surface structure at the lower fluence or short but well-developed nanofuzz structure at the higher fluence. There was little difference in the hot-rolled or recrystallized material's near-surface (≤50 nm) bubbles at either fluence. At higher fluence and deeper depth, the bubble populations of the hot-rolled and recrystallized were different, the recrystallized being larger and deeper. This may explain previous high-fluence results showing pronounced differences in recrystallized material. The deeper penetration in recrystallized material also implies that grain boundaries are traps, rather than high-diffusivity paths.« less

Preliminary results of fluid dynamic model calculation of convective motion induced by solar heating at the Venus cloud top level.

NASA Astrophysics Data System (ADS)

Lee, Yeon Joo; Imamura, Takeshi; Maejima, Yasumitsu; Sugiyama, Ko-ichiro

The thick cloud layer of Venus reflects solar radiation effectively, resulting in a Bond albedo of 76% (Moroz et al., 1985). Most of the incoming solar flux is absorbed in the upper cloud layer at 60-70 km altitude. An unknown UV absorber is a major sink of the solar energy at the cloud top level. It produces about 40-60% of the total solar heating near the cloud tops, depending on its vertical structure (Crisp et al., 1986; Lee et al., in preparation). UV images of Venus show a clear difference in morphology between laminar flow shaped clouds on the morning side and convective-like cells on the afternoon side of the planet in the equatorial region (Titov et al., 2012). This difference is probably related to strong solar heating at the cloud tops at the sub-solar point, rather than the influence from deeper level convection in the low and middle cloud layers (Imamura et al., 2014). Also, small difference in cloud top structures may trigger horizontal convection at this altitude, because various cloud top structures can significantly alter the solar heating and thermal cooling rates at the cloud tops (Lee et al., in preparation). Performing radiative forcing calculations for various cloud top structures using a radiative transfer model (SHDOM), we investigate the effect of solar heating at the cloud tops on atmospheric dynamics. We use CReSS (Cloud Resolving Storm Simulator), and consider the altitude range from 35 km to 90 km, covering a full cloud deck.

Glider Surveys of Philippine Archipelago Seas

DTIC Science & Technology

2011-08-03

opening of the system of’ deeper straits connecting the SCS and Sulu Sea. The Sulu glider also completed a track across the Panay Gulf’ mouth -between...Observe diurnal isopycnal displacements and strain. • Examine the spatial structure of the sea’s response to Mindoro’s wind jets. • Contribute...than 1000 m. mean and -variable structure near a large reef, a sea’s response to wind jets and wakes, across-strait structure at the archipelago’s

Understanding Demonstration-based Training: A Definition, Conceptual Framework, and Some Initial Guidelines

DTIC Science & Technology

2009-11-01

promoting learning by inducing deeper levels of transfer appropriate processing in the observer ( Craik & Lockhart , 1972; Bransford et al., 1977). We...Vicarious learning from dialogue and discourse. Instructional science, 27, 431-458. Craik , F., & Lockhart , R. (1972). Levels of processing : A...attention, retention and production processes are driven by levels of motivation. Higher levels of motivation will lead to more focused attention

Thermal stability and unfolding pathways of hyperthermophilic and mesophilic periplasmic binding proteins studied by molecular dynamics simulation.

PubMed

Chen, Lin; Li, Xue; Wang, Ruige; Fang, Fengqin; Yang, Wanli; Kan, Wei

2016-07-01

The ribose binding protein (RBP), a sugar-binding periplasmic protein, is involved in the transport and signaling processes in both prokaryotes and eukaryotes. Although several cellular and structural studies have been reported, a description of the thermostability of RBP at the molecular level remains elusive. Focused on the hyperthermophilic Thermoytoga maritima RBP (tmRBP) and mesophilic Escherichia coli homolog (ecRBP), we applied molecular dynamics simulations at four different temperatures (300, 380, 450, and 500 K) to obtain a deeper insight into the structural features responsible for the reduced thermostability of the ecRBP. The simulations results indicate that there are distinct structural differences in the unfolding pathway between the two homologs and the ecRBP unfolds faster than the hyperthermophilic homologs at certain temperatures in accordance with the lower thermal stability found experimentally. Essential dynamics analysis uncovers that the essential subspaces of ecRBP and tmRBP are non-overlapping and these two proteins show different directions of motion within the simulations trajectories. Such an understanding is required for designing efficient proteins with characteristics for a particular application.

Cat-Eyed Saturn

NASA Image and Video Library

2006-04-13

Bright, high altitude clouds, like those imaged here, often appear more filamentary or streak-like than clouds imaged at slightly deeper levels in Saturn atmosphere. This view also shows one of the many cat eye vortices.

Seismic Data Reveal Lake-Level Changes in Lake Issyk-Kul, Kyrgyzstan

NASA Astrophysics Data System (ADS)

Gebhardt, C.; Spiess, V.; Keil, H.; Sauermilch, I.; Oberhänsli, H.; Abdrakhmatov, K.; De Batist, M. A.; Naudts, L.; De Mol, L.

2013-12-01

Lake Issyk-Kul is located in an intramontane basin of the Tien Shan, Kyrgyzstan, Central Asia, at 1607 m above sea level. It has formed in a tectonically active region with W-E striking major thrust zones both N and S of the lake. The lake is elongated with 180 km in W-E and 60 km in S-N direction and a water depth of roughly 670 m at its central plain. With a surface area of 6232 km2 and a total water colume of around 1736 km3, Lake Issyk-Kul is the second largest lake in the higher altitudes (De Batist et al., 2002). Two large delta areas have formed at the E and W end. Steep slopes at both the N and S shore separate rather narrow, shallow shelf areas from the central deeper plain. First seismic data of lake Issyk-Kul were acquired in 1982 by the Moscow University with a total of 31 profiles across the lake. In 1997 and 2001, a second and third seismic survey of the lake were carried out by the group of Marc De Batist (Ghent, Belgium) in cooperation with the Royal Museum of Central Africa (Tervuren, Belgium) and the SBRAS (Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia) using a sparker system with a single-channel streamer. These surveys were recently completed by a fourth expedition carried out by the University of Bremen in April 2013. During this expedition, 33 additional profiles were acquired with an airgun and a multi-channel streamer. The sparker surveys mostly cover the delta and shelf areas in high detail, while the airgun survey covers the deeper parts of the lake with penetration beyond the first multiple. Bathymetry data reveal that at the delta areas, the shelf is divided into two parts. The shallower comprises the part down to 110 m water depth with an average inclination of 0.5°, while the deeper part reaches from 110 m to 300 m water depth with an average slope inclination of 1°. Incised paleo-river channels of up to 2-3 km width and 50 m depth are visible both on the eastern and western shelf, but are limited to the shallower part of the deltas. They lie in the prolongation of modern river mouths at the eastern part of the lake, while at the western lake, they connect to former in- and outlets of the Chu River that is currently bypassing the lake (De Mol, 2006). A series of morphological terraces interpreted as ancient shorelines characterize the deeper part of the shelf. Together with lake-level terraces that are outcroping along the lake shores, the delta areas document up to 400 m of lake-level change. Deeper-penetrating multi-channel airgun profiles reveal that the sediments are mostly well-layered at least down to the multiple, and large-scale debris flows were detected only in some spots. The dipping of the layers increases with depth and reveals a halfgraben structure filled with lacustrine sediments. References: De Batist, M., et al., 2002. Bathymetry and sedimentary environments of Lake Issyk-Kul, Kyrgyz Republic (Central Asia): a large, high-altitude, tectonic lake. In: J. Klerkx and B. Imanackunov (Editors), Lake Issyk-Kul: Its Natural Environment. NATO Science Series, Series IV: Earth and Environmental Sciences. Kluwer Academic Publishers, Dordrecht, pp. 101-123. De Mol, L., 2006. Reconstructie van meerspiegelschommelingen in het Issyk-Kul Meer (Kirgizië) op basis van de geomorfologische en seismostratigrafische analyse van rivierdelta's. M.Sc. Thesis, University of Gent, Gent, 144 pp.

Ionic micelles and aromatic additives: a closer look at the molecular packing parameter.

PubMed

Lutz-Bueno, Viviane; Isabettini, Stéphane; Walker, Franziska; Kuster, Simon; Liebi, Marianne; Fischer, Peter

2017-08-16

Wormlike micellar aggregates formed from the mixture of ionic surfactants with aromatic additives result in solutions with impressive viscoelastic properties. These properties are of high interest for numerous industrial applications and are often used as model systems for soft matter physics. However, robust and simple models for tailoring the viscoelastic response of the solution based on the molecular structure of the employed additive are required to fully exploit the potential of these systems. We address this shortcoming with a modified packing parameter based model, considering the additive-surfactant pair. The role of charge neutralization on anisotropic micellar growth was investigated with derivatives of sodium salicylate. The impact of the additives on the morphology of the micellar aggregates is explained from the molecular level to the macroscopic viscoelasticity. Changes in the micelle's volume, headgroup area and additive structure are explored to redefine the packing parameter. Uncharged additives penetrated deeper into the hydrophobic region of the micelle, whilst charged additives remained trapped in the polar region, as revealed by a combination of 1 H-NMR, SAXS and rheological measurements. A deeper penetration of the additives densified the hydrophobic core of the micelle and induced anisotropic growth by increasing the effective volume of the additive-surfactant pair. This phenomenon largely influenced the viscosity of the solutions. Partially penetrating additives reduced the electrostatic repulsions between surfactant headgroups and neighboring micelles. The resulting increased network density governed the elasticity of the solutions. Considering a packing parameter composed of the additive-surfactant pair proved to be a facile means of engineering the viscoelastic response of surfactant solutions. The self-assembly of the wormlike micellar aggregates could be tailored to desired morphologies resulting in a specific and predictable rheological response.

Structure and stress state of Hawaiian island basalts penetrated by the Hawaii Scientific Drilling Project deep core hole

USGS Publications Warehouse

Morin, R.H.; Wilkens, R.H.

2005-01-01

As part of the Hawaii Scientific Drilling Project (HSDP), an exploratory hole was drilled in 1993 to a depth of 1056 meters below sea level (mbsl) and a deeper hole was drilled to 3098 mbsl in 1999. A set of geophysical well logs was obtained in the deeper hole that provides fundamental information regarding the structure and the state of stress that exist within a volcanic shield. The acoustic televiewer generates digital, magnetically oriented images of the borehole wall, and inspection of this log yields a continuous record of fracture orientation with depth and also with age to 540 ka. The data depict a clockwise rotation in fracture strike through the surficial Mauna Loa basalts that settles to a constant heading in the underlying Mauna Kea rocks. This behavior reflects the depositional slope directions of lavas and the locations of volcanic sources relative to the drill site. The deviation log delineates the trajectory of the well bore in three-dimensional space. This path closely follows changes in fracture orientation with depth as the drill bit is generally prodded perpendicular to fracture strike during the drilling process. Stress-induced breakouts observed in the televiewer log identify the orientations ot the maximum and minimum horizontal principal stresses to be north-south and east-west, respectively. This stress state is attributed to the combination of a sharp break in onshore-offshore slope that reduces stress east-west and the emergence of Kilauea that increases stress north-south. Breakouts are extensive and appear over approximately 30% of the open hole. Copyright 2005 by the American Geophysical Union.

Pilot study on probe-based confocal laser endomicroscopy for colorectal neoplasms: an initial experience in Japan.

PubMed

Abe, Seiichiro; Saito, Yutaka; Oono, Yasuhiro; Tanaka, Yusaku; Sakamoto, Taku; Yamada, Masayoshi; Nakajima, Takeshi; Matsuda, Takahisa; Ikematsu, Hiroaki; Yano, Tomonori; Sekine, Shigeki; Kojima, Motohiro; Yamagishi, Hidetsugu; Kato, Hiroyuki

2018-04-26

The aim of this pilot study is to investigate the diagnostic yield of probe-based confocal laser endomicroscopy (pCLE) in the evaluation of depth of invasion in colorectal lesions. Patients with colorectal lesions eligible for either endoscopic treatment or surgery were enrolled in the study. Tumor's depth of invasion was classified as mucosal or slight submucosal (M-SM1) and deep submucosal invasion or deeper (SM2 or deeper). White light endoscopy (WLE), magnifying narrow band imaging (M-NBI), and magnifying chromoendoscopy (M-CE) were used to assess colorectal lesions, and pCLE was used to identify tumor's features related to SM2 or deeper. The diagnostic classification of depth of invasion was obtained by correlating pCLE findings with histology results (on-site diagnosis). All colorectal lesions were stratified by a second endoscopist who was blinded to any clinical and histological information with the use of WLE, M-NBI, M-CE, and pCLE (off-line review). A total of 22 colorectal lesions were analyzed: seven were adenoma, ten intramucosal cancer, and five SM2 or deeper cancer. With respect to pCLE findings, loss of crypt structure was seen in all SM2 or deeper cancers and only in one M-SM1 lesion. Sensitivity, specificity, and accuracy of WLE, M-NBI, and M-CE in off-line review were 60/94/86, 60/94/86, and 80/94/91%, respectively. Sensitivity/specificity/accuracy of pCLE in off-line review were 80/94/91%, respectively. The inter-observer agreement of pCLE between on-site diagnosis and off-line review was 0.64 (95%CI 0.27-1.0). pCLE may represent a useful tool to evaluate the depth of invasion in colorectal lesions.

Sub-cellular force microscopy in single normal and cancer cells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Babahosseini, H.; Carmichael, B.; Strobl, J.S.

2015-08-07

This work investigates the biomechanical properties of sub-cellular structures of breast cells using atomic force microscopy (AFM). The cells are modeled as a triple-layered structure where the Generalized Maxwell model is applied to experimental data from AFM stress-relaxation tests to extract the elastic modulus, the apparent viscosity, and the relaxation time of sub-cellular structures. The triple-layered modeling results allow for determination and comparison of the biomechanical properties of the three major sub-cellular structures between normal and cancerous cells: the up plasma membrane/actin cortex, the mid cytoplasm/nucleus, and the low nuclear/integrin sub-domains. The results reveal that the sub-domains become stiffer andmore » significantly more viscous with depth, regardless of cell type. In addition, there is a decreasing trend in the average elastic modulus and apparent viscosity of the all corresponding sub-cellular structures from normal to cancerous cells, which becomes most remarkable in the deeper sub-domain. The presented modeling in this work constitutes a unique AFM-based experimental framework to study the biomechanics of sub-cellular structures. - Highlights: • The cells are modeled as a triple-layered structure using Generalized Maxwell model. • The sub-domains include membrane/cortex, cytoplasm/nucleus, and nuclear/integrin. • Biomechanics of corresponding sub-domains are compared among normal and cancer cells. • Viscoelasticity of sub-domains show a decreasing trend from normal to cancer cells. • The decreasing trend becomes most significant in the deeper sub-domain.« less

Evolution of Structure in Nuclei: Meditation by Sub-Shell Modifications and Relation to Binding Energies

NASA Astrophysics Data System (ADS)

Casten, R. F.; Cakirli, R. B.

2009-03-01

Understanding the development of configuration mixing, coherence, collectivity, and deformation in nuclei is one of the crucial challenges in nuclear structure physics, and one which has become all the more important with the advent of next generation facilities for the study of exotic nuclei. We will discuss recent work on phase/shape transitional behavior in nuclei, and the role of changes in sub-shell structure in mediating such transitional regions. We will also discuss a newly found, much deeper, link between nuclear structure and nuclear binding energies.

Application and possible mechanisms of combining LLLT (low level laser therapy), infrared hyperthermia and ionizing radiation in the treatment of cancer

NASA Astrophysics Data System (ADS)

Abraham, Edward H.; Woo, Van H.; Harlin-Jones, Cheryl; Heselich, Anja; Frohns, Florian

2014-02-01

Benefit of concomitant infrared hyperthermia and low level laser therapy and ionizing radiation is evaluated in this study. The purpose/objectives: presentation with locally advanced bulky superficial tumors is clinically challenging. To enhance the efficacy of chemotherapy and IMRT (intensity-modulated radiation therapy) and/or electron beam therapy we have developed an inexpensive and clinically effective infrared hyperthermia approach that combines black-body infrared radiation with halogen spectrum radiation and discrete wave length infrared clinical lasers LLLT. The goal is to produce a composite spectrum extending from the far infrared to near infrared and portions of the visible spectrum with discrete penetrating wavelengths generated by the clinical infrared lasers with frequencies of 810 nm and/or 830 nm. The composite spectrum from these sources is applied before and after radiation therapy. We monitor the surface and in some cases deeper temperatures with thermal probes, but use an array of surface probes as the limiting safe thermal constraint in patient treatment while at the same time maximizing infrared entry to deeper tissue layers. Fever-grade infrared hyperthermia is produced in the first centimeters while non-thermal infrared effects act at deeper tissue layers. The combination of these effects with ionizing radiation leads to improved tumor control in many cancers.

Snapshot recordings provide a first description of the acoustic signatures of deeper habitats adjacent to coral reefs of Moorea

PubMed Central

Parmentier, Eric; Berthe, Cécile; Besson, Marc; Hawkins, Anthony D.; Aubin, Thierry; Lecchini, David

2017-01-01

Acoustic recording has been recognized as a valuable tool for non-intrusive monitoring of the marine environment, complementing traditional visual surveys. Acoustic surveys conducted on coral ecosystems have so far been restricted to barrier reefs and to shallow depths (10–30 m). Since they may provide refuge for coral reef organisms, the monitoring of outer reef slopes and describing of the soundscapes of deeper environment could provide insights into the characteristics of different biotopes of coral ecosystems. In this study, the acoustic features of four different habitats, with different topographies and substrates, located at different depths from 10 to 100 m, were recorded during day-time on the outer reef slope of the north Coast of Moorea Island (French Polynesia). Barrier reefs appeared to be the noisiest habitats whereas the average sound levels at other habitats decreased with their distance from the reef and with increasing depth. However, sound levels were higher than expected by propagation models, supporting that these habitats possess their own sound sources. While reef sounds are known to attract marine larvae, sounds from deeper habitats may then also have a non-negligible attractive potential, coming into play before the reef itself. PMID:29158970

[Multimorbidity and primary care: Emergence of new forms of network organization].

PubMed

Lamothe, Lise; Sylvain, Chantal; Sit, Vanessa

2015-01-01

This study was designed to analyse the adaptive strategies used by primary care professionals to provide more adapted and continuous services to patients with more than one chronic disease. A qualitative case study was conducted in a primary care structure (GMF in Québec). Data were derived from two sources: semi-structured interviews and documents. Based on our thematic analysis of data, we illustrate the adaptive processes at play. Our analysis identified the challenges raised by the increased prevalence of patients with more than one chronic disease and how they influence adaptive strategic initiatives from professionals at the following levels: (1) the patients themselves, (2) the professional-patient relationship, (3) the relationships between professionals of the GMF (4) the relationships between the GMF and other healthcare organizations. The description of these phenomena illustrates the dynamic emergence ofa network form of organization. This phenomenon leads to transformation of the core of the healthcare production system. A deeper understanding of its emergence, impacts and management is necessary.

In situ studies of oxide nucleation, growth, and transformation using slow electrons

NASA Astrophysics Data System (ADS)

Flege, Jan Ingo; Grinter, David C.

2018-05-01

Surface processes such as metal oxidation and metal oxide growth invariably influence the physical and chemical properties of materials and determine their interaction with their surroundings and hence their functionality in many technical applications. On a fundamental level, these processes are found to be governed by a complex interplay of thermodynamic variables and kinetic constraints, resulting in a rich variety of material-specific phenomena. In this review article, we discuss recent results and insights on transition metal oxidation and rare-earth oxide growth acquired by low-energy electron microscopy and related techniques. We demonstrate that the use of in situ surface sensitive methods is a prerequisite to gaining a deeper understanding of the underlying concepts and the mechanisms responsible for the emerging oxide structure and morphology. Furthermore, examples will be provided on how structural and chemical modifications of the oxide films and nanostructures can be followed in real-time and analyzed in terms of local reactivity and cooperative effects relevant for heterogeneous model catalysis.

Seasonal variation of assemblage and feeding guild structure of fish species in a boreal tidal basin

NASA Astrophysics Data System (ADS)

Kellnreitner, Florian; Pockberger, Moritz; Asmus, Harald

2012-08-01

Species composition, abundance, feeding relationships and guild structure of the fish assemblage in the Sylt-Rømø bight, a tidal basin in the northern Wadden Sea, were investigated to show seasonal differences and the importance of functional groups in this area. The tidal flats and in shallow subtidal areas were sampled using a beach seine and a bottom trawl net was used for deeper subtidal areas and tidal gullies. Species richness of fish was highest in summer where 26 species were caught, while the lowest richness was recorded in winter (17 species). Clear differences in species richness and abundance were found between shallow areas and deeper parts of the bight. Clupea harengus and Ammodytes tobianus were the most abundant species in deeper areas, while Pomatoschistus microps and Pomatoschistus minutus dominated shallower waters. Gut contents of 27 fish species were identified and the guild structure analyzed by UPGMA clustering of niche overlaps. Calanoid copepods (19.9%), Crangon crangon (18.2%) and mysid shrimps (8.4%) were the most abundant prey items of all fish species combined. Seven feeding guilds were present in the fall and winter, and eight and six in spring and summer, respectively. Fish feeding on calanoid copepods and C. crangon were present year round, whereas the occurrence of other guilds varied between seasons. Species composition of prey changed through seasons and, for some fish species, even the feeding mode itself varied with season. Most noticeable, 11 fish species changed guilds between seasons. We found a convergence in summer towards abundant prey items, whereas in winter diet overlap was lower. This is the first investigation of guild structure of almost all fish species present in a Wadden Sea area, and shows that consideration of seasonal differences is essential when determining feeding relationships of fish in temperate areas.

Moving and Being Moved: Implications for Practice.

ERIC Educational Resources Information Center

Kretchmar, R. Scott

2000-01-01

Uses philosophical writings, a novel about baseball, and a nonfiction work on rowing to analyze levels of meaning in physical activity, showing why three popular methods for enhancing meaning have not succeeded and may have moved some students away from deeper levels of meaning. The paper suggests that using hints taken from the three books could…

Understanding Atomic Structure: Is There a More Direct and Compelling Connection between Atomic Line Spectra and the Quantization of an Atom's Energy?

ERIC Educational Resources Information Center

Rittenhouse, Robert C.

2015-01-01

The "atoms first" philosophy, adopted by a growing number of General Chemistry textbook authors, places greater emphasis on atomic structure as a key to a deeper understanding of the field of chemistry. A pivotal concept needed to understand the behavior of atoms is the restriction of an atom's energy to specific allowed values. However,…

The Further Evolution of Cooperation

NASA Astrophysics Data System (ADS)

Axelrod, Robert; Dion, Douglas

1988-12-01

Axelrod's model of the evolution of cooperation was based on the iterated Prisoner's Dilemma. Empirical work following this approach has helped establish the prevalence of cooperation based on reciprocity. Theoretical work has led to a deeper understanding of the role of other factors in the evolution of cooperation: the number of players, the range of possible choices, variation in the payoff structure, noise, the shadow of the future, population dynamics, and population structure.

Climate-induced changes in lake ecosystem structure inferred from coupled neo- and paleoecological approaches

USGS Publications Warehouse

Saros, Jasmine E.; Stone, Jeffery R.; Pederson, Gregory T.; Slemmons, Krista; Spanbauer, Trisha; Schliep, Anna; Cahl, Douglas; Williamson, Craig E.; Engstrom, Daniel R.

2015-01-01

Over the 20th century, surface water temperatures have increased in many lake ecosystems around the world, but long-term trends in the vertical thermal structure of lakes remain unclear, despite the strong control that thermal stratification exerts on the biological response of lakes to climate change. Here we used both neo- and paleoecological approaches to develop a fossil-based inference model for lake mixing depths and thereby refine understanding of lake thermal structure change. We focused on three common planktonic diatom taxa, the distributions of which previous research suggests might be affected by mixing depth. Comparative lake surveys and growth rate experiments revealed that these species respond to lake thermal structure when nitrogen is sufficient, with species optima ranging from shallower to deeper mixing depths. The diatom-based mixing depth model was applied to sedimentary diatom profiles extending back to 1750 AD in two lakes with moderate nitrate concentrations but differing climate settings. Thermal reconstructions were consistent with expected changes, with shallower mixing depths inferred for an alpine lake where treeline has advanced, and deeper mixing depths inferred for a boreal lake where wind strength has increased. The inference model developed here provides a new tool to expand and refine understanding of climate-induced changes in lake ecosystems.

The use of positrons to survey alteration layers on synthetic nuclear waste glasses

NASA Astrophysics Data System (ADS)

Reiser, Joelle T.; Parruzot, Benjamin; Weber, Marc H.; Ryan, Joseph V.; McCloy, John S.; Wall, Nathalie A.

2017-07-01

In order to safeguard society and the environment, understanding radioactive waste glass alteration mechanisms in interactions with solutions and near-field materials, such as Fe, is essential to nuclear waste repository performance assessments. Alteration products are formed at the surface of glasses after reaction with solution. In this study, glass altered in the presence of Fe0 in aqueous solution formed two alteration layers: one embedded with Fe closer to the surface and one without Fe found deeper in the sample. Both layers were found to be thinner than the alteration layer found in glass altered in aqueous solution only. For the first time, Doppler Broadening Positron Annihilation Spectroscopy (DB-PAS) is used to non-destructively characterize the pore structures of glass altered in the presence of Fe0. Advantages and disadvantages of DB-PAS compared to other techniques used to analyze pore structures for altered glass samples are discussed. Ultimately, DB-PAS has shown to be an excellent choice for pore structure characterization for glasses with multiple alteration layers. Monte Carlo modeling predicted positron trajectories through the layers, and helped explain DB-PAS data, which showed that the deeper alteration layer without Fe had a similar composition and pore structure to layers on glass altered in water only.

The use of positrons to survey alteration layers on synthetic nuclear waste glasses

DOE PAGES

Reiser, Joelle T.; Parruzot, Benjamin; Weber, Marc H.; ...

2017-07-01

Here, in order to safeguard society and the environment, understanding radioactive waste glass alteration mechanisms in interactions with solutions and near-field materials, such as Fe, is essential to nuclear waste repository performance assessments. Alteration products are formed at the surface of glasses after reaction with solution. In this study, glass altered in the presence of Fe 0 in aqueous solution formed two alteration layers: one embedded with Fe closer to the surface and one without Fe found deeper in the sample. Both layers were found to be thinner than the alteration layer found in glass altered in aqueous solution only.more » For the first time, Doppler Broadening Positron Annihilation Spectroscopy (DB-PAS) is used to non-destructively characterize the pore structures of glass altered in the presence of Fe 0. Advantages and disadvantages of DB-PAS compared to other techniques used to analyze pore structures for altered glass samples are discussed. Ultimately, DB-PAS has shown to be an excellent choice for pore structure characterization for glasses with multiple alteration layers. Monte Carlo modeling predicted positron trajectories through the layers, and helped explain DB-PAS data, which showed that the deeper alteration layer without Fe had a similar composition and pore structure to layers on glass altered in water only.« less

The use of positrons to survey alteration layers on synthetic nuclear waste glasses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reiser, Joelle T.; Parruzot, Benjamin; Weber, Marc H.

Here, in order to safeguard society and the environment, understanding radioactive waste glass alteration mechanisms in interactions with solutions and near-field materials, such as Fe, is essential to nuclear waste repository performance assessments. Alteration products are formed at the surface of glasses after reaction with solution. In this study, glass altered in the presence of Fe 0 in aqueous solution formed two alteration layers: one embedded with Fe closer to the surface and one without Fe found deeper in the sample. Both layers were found to be thinner than the alteration layer found in glass altered in aqueous solution only.more » For the first time, Doppler Broadening Positron Annihilation Spectroscopy (DB-PAS) is used to non-destructively characterize the pore structures of glass altered in the presence of Fe 0. Advantages and disadvantages of DB-PAS compared to other techniques used to analyze pore structures for altered glass samples are discussed. Ultimately, DB-PAS has shown to be an excellent choice for pore structure characterization for glasses with multiple alteration layers. Monte Carlo modeling predicted positron trajectories through the layers, and helped explain DB-PAS data, which showed that the deeper alteration layer without Fe had a similar composition and pore structure to layers on glass altered in water only.« less

A case study of middle size floating airports for shallower and deeper waters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yoshida, Koichiro; Suzuki, Hideyuki; Nishigaki, Makoto

1996-12-31

Demands for large and middle size airports are expanding in Japan with continuous increase of air transportation. However these demands will not be satisfied without effective ocean space utilization. Most of the wide and shallower waters suitable for reclamation have already been reclaimed. Furthermore those shallower waters are generally close to the residential area, and noise and environmental problems will be caused if they were used for airports. Deeper waters, which are relatively distant from the shore, are suitable for airport but reclamation of these waters are extremely difficult. This paper presents a structural planning of an open sea typemore » middle size floating airport to promote local economy and also improve transportation infrastructure of isolated islands. The airports of this plan are a semisubmersible type floating structure with a relatively thin deck, a number of slender columns and large size lower hulls. The floating structure is moored by inclined tension legs to restrain the motion. The diameter of the leg becomes much larger compared with the legs of existing tension leg platforms. Parameters related to the configuration of the floating structure and the mooring system are determined by comparing analyses results with the proper design criteria. Several kinds of static and dynamic computer programs are used in the planning. The proposed structural plan and the mooring system are considered as a typical floating airport appropriate for the open sea.« less

2-(2-Hydroxyphenyl)imidazole-based four-coordinate organoboron compounds with efficient deep blue photoluminescence and electroluminescence.

PubMed

Zhang, Zhenyu; Zhang, Zuolun; Zhang, Hongyu; Wang, Yue

2017-12-19

Two new four-coordinate organoboron compounds with 2-(2-hydroxyphenyl)imidazole derivatives as the chelating ligands have been synthesized. They possess high thermal stability and are able to form an amorphous glass state. Crystallographic analyses indicate that the differences in ligand structure cause the change of ππ stacking character. The CH 2 Cl 2 solutions and thin films of these compounds display bright blue emission, and these compounds have appropriate HOMO and LUMO energy levels for carrier injection in OLEDs. By utilizing the good thermal and luminescent properties, as well as the proper frontier orbital energy levels, bright non-doped OLEDs with a simple structure have been realized. Notably, these simple devices show deep blue electroluminescence with the Commission Internationale de l'Éclairage (CIE) coordinate of ca. (0.16, 0.08), which is close to the CIE coordinate of (0.14, 0.08) for standard blue defined by the National Television System Committee. In addition, one of the devices exhibits good performance, showing brightness, current efficiency, power efficiency and external quantum efficiency up to 2692 cd m -2 , 2.50 cd A -1 , 1.81 lm W -1 and 3.63%, respectively. This study not only provides good deep-blue emitting OLED materials that are rarely achieved by using four-coordinate organoboron compounds, but also allows a deeper understanding of the structure-property relationship of 2-(2-hydroxyphenyl)imidazole-based boron complexes, which benefits the further structural design of this type of material.

The effects of habitat on coral bleaching responses in Kenya.

PubMed

Grimsditch, Gabriel; Mwaura, Jelvas M; Kilonzo, Joseph; Amiyo, Nassir

2010-06-01

This study examines the bleaching responses of scleractinian corals at four sites in Kenya (Kanamai, Vipingo, Mombasa and Nyali) representing two distinct lagoon habitats (relatively shallow and relatively deep). Bleaching incidence was monitored for the whole coral community, while zooxanthellae densities and chlorophyll levels were monitored for target species (Pocillopora damicornis, Porites lutea, and Porites cylindrica) during a non-bleaching year (2006) and a year of mild-bleaching (2007). Differences in bleaching responses between habitats were observed, with shallower sites Kanamai and Vipingo exhibiting lower bleaching incidence than deeper sites Nyali and Mombasa. These shallower lagoons display more fluctuating thermal and light environments than the deeper sites, suggesting that corals in the shallower lagoons have acclimatized and/or adapted to the fluctuating environmental conditions they endure on a daily basis and have become more resistant to bleaching stress. In deeper sites that did exhibit higher bleaching (Mombasa and Nyali), it was found that coral recovery occurred more quickly in the protected area than in the non-protected area.

Single pulse two-photon fluorescence lifetime imaging (SP-FLIM) with MHz pixel rate and an all fiber based setup

NASA Astrophysics Data System (ADS)

Eibl, Matthias; Karpf, Sebastian; Hakert, Hubertus; Weng, Daniel; Pfeiffer, Tom; Kolb, Jan Philip; Huber, Robert

2017-07-01

Newly developed microscopy methods have the goal to give researches in bio-molecular science a better understanding of processes ongoing on a cellular level. Especially two-photon excited fluorescence (TPEF) microscopy is a readily applied and widespread modality. Compared to one photon fluorescence imaging, it is possible to image not only the surface but also deeper lying structures. Together with fluorescence lifetime imaging (FLIM), which provides information on the chemical composition of a specimen, deeper insights on a molecular level can be gained. However, the need for elaborate light sources for TPEF and speed limitations for FLIM hinder an even wider application. In this contribution, we present a way to overcome this limitations by combining a robust and inexpensive fiber laser for nonlinear excitation with a fast analog digitization method for rapid FLIM imaging. The applied sub nanosecond pulsed laser source is perfectly suited for fiber delivery as typically limiting non-linear effects like self-phase or cross-phase modulation (SPM, XPM) are negligible. Furthermore, compared to the typically applied femtosecond pulses, our longer pulses produce much more fluorescence photons per single shot. In this paper, we show that this higher number of fluorescence photons per pulse combined with a high analog bandwidth detection makes it possible to not only use a single pulse per pixel for TPEF imaging but also to resolve the exponential time decay for FLIM. To evaluate our system, we acquired FLIM images of a dye solution with single exponential behavior to assess the accuracy of our lifetime determination and also FLIM images of a plant stem at a pixel rate of 1 MHz to show the speed performance of our single pulse two-photon FLIM (SP-FLIM) system.

Effect of Energy Alignment, Electron Mobility, and Film Morphology of Perylene Diimide Based Polymers as Electron Transport Layer on the Performance of Perovskite Solar Cells.

PubMed

Guo, Qiang; Xu, Yingxue; Xiao, Bo; Zhang, Bing; Zhou, Erjun; Wang, Fuzhi; Bai, Yiming; Hayat, Tasawar; Alsaedi, Ahmed; Tan, Zhan'ao

2017-03-29

For organic-inorganic perovskite solar cells (PerSCs), the electron transport layer (ETL) plays a crucial role in efficient electron extraction and transport for high performance PerSCs. Fullerene and its derivatives are commonly used as ETL for p-i-n structured PerSCs. However, these spherical small molecules are easy to aggregate with high annealing temperature and thus induce morphology stability problems. N-type conjugated polymers are promising candidates to overcome these problems due to the tunable energy levels, controllable aggregation behaviors, and good film formation abilities. Herein, a series of perylene diimide (PDI) based polymers (PX-PDIs), which contain different copolymeried units (X), including vinylene (V), thiophene (T), selenophene (Se), dibenzosilole (DBS), and cyclopentadithiophene (CPDT), are introduced as ETL for p-i-n structured PerSCs. The effect of energy alignment, electron mobility, and film morphology of these ETLs on the photovoltaic performance of the PerSCs are fully investigated. Among the PX-PDIs, PV-PDI demonstrates the deeper LUMO energy level, the highly delocalized LUMO electron density, and a better planar structure, making it the best electron transport material for PerSCs. The planar heterojunction PerSC with PV-PDI as ETL achieves a power conversion efficiency (PCE) of 10.14%, among the best values for non-fullerene based PerSCs.

Hydrogeology of shallow basin-fill deposits in areas of Salt Lake Valley, Salt Lake County, Utah

USGS Publications Warehouse

Thiros, Susan A.

2003-01-01

A study of recently developed residential/commercial areas of Salt Lake Valley, Utah, was done from 1999 to 2001 in areas in which shallow ground water has the potential to move to a deeper aquifer that is used for public supply. Thirty monitoring wells were drilled and sampled in 1999 as part of the study. The ground water was either under unconfined or confined conditions, depending on depth to water and the presence or absence of fine-grained deposits. The wells were completed in the shallowest water-bearing zone capable of supplying water. Monitoring-well depths range from 23 to 154 feet. Lithologic, geophysical, hydraulic-conductivity, transmissivity, water-level, and water-temperature data were obtained for or collected from the wells.Silt and clay layers noted on lithologic logs correlate with increases in electrical conductivity and natural gamma radiation shown on many of the electromagnetic-induction and natural gamma logs. Relatively large increases in electrical conductivity, determined from the electromagnetic-induction logs, with no major changes in natural gamma radiation are likely caused by increased dissolved-solids content in the ground water. Some intervals with high electrical conductivity correspond to areas in which water was present during drilling.Unconfined conditions were present at 7 of 20 monitoring wells on the west side and at 2 of 10 wells on the east side of Salt Lake Valley. Fine-grained deposits confine the ground water. Anthropogenic compounds were detected in water sampled from most of the wells, indicating a connection with the land surface. Data were collected from 20 of the monitoring wells to estimate the hydraulic conductivity and transmissivity of the shallow ground-water system. Hydraulic-conductivity values of the shallow aquifer ranged from 30 to 540 feet per day. Transmissivity values of the shallow aquifer ranged from 3 to 1,070 feet squared per day. There is a close linear relation between transmissivity determined from slug-test analysis and transmissivity estimated from specific capacity.Water-level fluctuations were measured in the 30 monitoring wells from 1999 to July 2001. Generally, water-level changes measured in wells on the west side of the valley followed a seasonal trend and wells on the east side showed less fluctuation or a gradual decline during the 2-year period. This may indicate that a larger percentage of recharge to the shallow ground-water system on the west side is from somewhat consistent seasonal sources, such as canals and unconsumed irrigation water, as compared to sources on the east side. Water levels measured in monitoring wells completed in the shallow ground-water system near large-capacity public-supply wells varied in response to ground-water withdrawals from the deeper confined aquifer. Water temperature was monitored in 23 wells. Generally, little or no change in water temperature was measured in monitoring wells with a depth to water greater than about 40 feet. The shallower the water level in the well, the greater the water-temperature change measured during the study.Comparison of water levels measured in the monitoring wells and deeper wells in the same area indicate a downward gradient on the east side of the valley. Water levels in the shallow and deeper aquifers in the secondary recharge area on the west side of the valley were similar to those on the east side. Water levels measured in the monitoring wells and nearby wells completed in the deeper aquifer indicate that the vertical gradient can change with time and stresses on the system.

The use of XAFS to determine the nature of interaction of iron and molybdenum metal salts within PS-b-P2VP micelles.

PubMed

Riskin, Alexander; Beale, Andrew M; Boyen, Hans-Gerhard; Vantomme, André; Hardy, An; Van Bael, Marlies K

2013-02-07

The poly(styrene)-block-poly(2-vinylpyridine) (PS-b-P2VP) micelle route is a well established method for the preparation of bimetallic nanoparticles used for the catalysis of carbon nanotubes and other applications like ultrahigh density storage devices, yet to date no information is available concerning the internal structure of the P2VP-metal salt complex. For the first time, XAFS measurements were performed on micelles loaded with either iron(III) chloride or molybdenum(V) chloride and a combination of both. Analysis of the data revealed that iron is tetrahedrally coordinated within the core, whereas molybdenum is octahedrally coordinated in the pure loaded micelles and trigonally coordinated in the mixed micelles. For the bimetallic samples, analysis of the Fe and Mo K-edge data revealed the existence of an interaction between iron and molybdenum. This approach to obtain detailed structural information during the preparation of these catalyst samples will allow for a deeper understanding of the effects of structure on the function of catalysts used for CNT growth i.e. to explain differences in yield as well as potentially providing a deeper understanding of the CNT growth mechanism itself.

Structural mapping of Chikotra River basin in the Deccan Volcanic Province of Maharashtra, India from ground magnetic data

NASA Astrophysics Data System (ADS)

Anand, S. P.; Erram, Vinit C.; Patil, J. D.; Pawar, N. J.; Gupta, Gautam; Suryavanshi, R. A.

2016-03-01

Ground magnetic data collected over Chikotra River in the peripheral region of Deccan Volcanic Province (DVP) of Maharashtra located in Kolhapur district was analysed to throw light on the structural pattern and distribution of magnetic sources within the basin. In order to isolate the magnetic anomalies showing varying trend and amplitude, several transformation operations including wavelength filtering, and upward continuation has been carried out on the reduced to pole anomaly map. Qualitative interpretation of these products help identify the distribution of magnetic sources, viz., the Deccan basalts, dolerite intrusives and older greenstone and schist belts in the subsurface. Present study suggests that the Chikotra basin is composed of three structural units; a NE-SW unit superposed on deeper NW-SE unit with randomly distributed trap flows on the surface. One of the major outcome of the present study is the delineation of almost 900-m thick Proterozoic Kaladgi sediments below the Deccan trap flows. The NE-SW magnetic sources may probably represent intrusives into the Kaladgi sediments, while the deeper NW-SE trends are interpreted as the northward extension of the Dharwars, underneath the Deccan lava flows, that forms the basement for the deposition of Kaladgi sediments.

Evidence of Deeper Learning Outcomes: Findings from the Study of Deeper Learning

ERIC Educational Resources Information Center

Taylor, James

2014-01-01

The "Study of Deeper Learning: Opportunities and Outcomes", funded by the William and Flora Hewlett Foundation, is a "proof-of-concept" study to determine whether students attending high schools with a mature and at least moderately well-implemented approach to promoting deeper learning experience greater deeper learning…

Universally Designed Text on the Web: Towards Readability Criteria Based on Anti-Patterns.

PubMed

Eika, Evelyn

2016-01-01

The readability of web texts affects accessibility. The Web Content Accessibility guidelines (WCAG) state that the recommended reading level should match that of someone who has completed basic schooling. However, WCAG does not give advice on what constitutes an appropriate reading level. Web authors need tools to help composing WCAG compliant texts, and specific criteria are needed. Classic readability metrics are generally based on lengths of words and sentences and have been criticized for being over-simplistic. Automatic measures and classifications of texts' reading levels employing more advanced constructs remain an unresolved problem. If such measures were feasible, what should these be? This work examines three language constructs not captured by current readability indices but believed to significantly affect actual readability, namely, relative clauses, garden path sentences, and left-branching structures. The goal is to see whether quantifications of these stylistic features reflect readability and how they correspond to common readability measures. Manual assessments of a set of authentic web texts for such uses were conducted. The results reveal that texts related to narratives such as children's stories, which are given the highest readability value, do not contain these constructs. The structures in question occur more frequently in expository texts that aim at educating or disseminating information such as strategy and journal articles. The results suggest that language anti-patterns hold potential for establishing a set of deeper readability criteria.

Polymers and Cross-Linking: A CORE Experiment to Help Students Think on the Submicroscopic Level

ERIC Educational Resources Information Center

Bruce, Mitchell R. M.; Bruce, Alice E.; Avargil, Shirly; Amar, Francois G.; Wemyss, Thomas M.; Flood, Virginia J.

2016-01-01

The Polymers and Cross-Linking experiment is presented via a new three phase learning cycle: CORE (Chemical Observations, Representations, Experimentation), which is designed to model productive chemical inquiry and to promote a deeper understanding about the chemistry operating at the submicroscopic level. The experiment is built on two familiar…

A Theoretical Analysis of Learning with Graphics--Implications for Computer Graphics Design.

ERIC Educational Resources Information Center

ChanLin, Lih-Juan

This paper reviews the literature pertinent to learning with graphics. The dual coding theory provides explanation about how graphics are stored and precessed in semantic memory. The level of processing theory suggests how graphics can be employed in learning to encourage deeper processing. In addition to dual coding theory and level of processing…

Organizational and Relational Factors in Professional Learning Communities

ERIC Educational Resources Information Center

Gray, Julie; Mitchell, Roxanne; Tarter, C. John

2014-01-01

The roles of organizational and relational factors in regard to professional learning communities (PLCs) have been investigated by many, yet none have considered enabling school structures, trust, and collective efficacy as variables. We take a deeper look at the formal or organizational aspects of the school represented by enabling school…

Novel into Film: An Experimental Course.

ERIC Educational Resources Information Center

Admussen, Richard L.; And Others

1978-01-01

A course studying narrative works from eight major French novelists, and the film adaptions of these works are described. Course discussions are directed toward a deeper understanding of the novel and a comparison of the structures, techniques, and limits of the two genres. Journal availability: Literature/Film Quarterly, Salisbury State College,…

Providing Opportunities for Deeper Learning. Findings from the Study of Deeper Learning Opportunities and Outcomes: Report 2

ERIC Educational Resources Information Center

Bitter, Catherine; Taylor, James; Zeiser, Kristina L.; Rickles, Jordan

2014-01-01

The "Study of Deeper Learning: Opportunities and Outcomes"--funded by the William and Flora Hewlett Foundation--aimed to determine whether students attending high schools with a mature and at least moderately well implemented approach to promoting deeper learning actually experienced greater deeper learning opportunities and outcomes…

Evidence of Deeper Learning Outcomes. Findings from the Study of Deeper Learning Opportunities and Outcomes: Report 3

ERIC Educational Resources Information Center

Zeiser, Kristina L.; Taylor, James; Rickles, Jordan; Garet, Michael S.; Segeritz, Michael

2014-01-01

The "Study of Deeper Learning: Opportunities and Outcomes"--funded by the William and Flora Hewlett Foundation--aimed to determine whether students attending high schools with a mature and at least moderately well implemented approach to promoting deeper learning actually experienced greater deeper learning opportunities and outcomes…

Microhabitat use, home range, and movements of the alligator snapping turtle, Macrochelys temminckii, in Oklahoma

USGS Publications Warehouse

Riedle, J.D.; Shipman, P.A.; Fox, S. F.; Leslie, David M.

2006-01-01

Little is known about the ecology of the alligator snapping turtle, Macrochelys temminckii, particularly dentography and behavior. To learn more about the species in Oklahoma, we conducted a telemetry project on 2 small streams at Sequoyah National Wildlife Refuge, an 8,417.5-ha refuge located in east-central Oklahoma. Between June 1999 and August 2000, we fitted 19 M. temminckii with ultrasonic telemetry tags and studied turtle movements and microhahitat use. Turtles were checked 2 to 3 times weekly in summer and sporadically in winter. Several microhabitat variables were measured at each turtle location and a random location to help quantify microhabitat use vs. availability. We recorded 147 turtle locations. Turtles were always associated with submerged cover with a high percentage of overhead canopy cover. Turtles used deeper depths in late summer (but not deeper depths than random locations) and deeper depths in mid-winter (and deeper depths than random locations) than in early summer. They used shallower depths than random locations in early summer. This seasonal shift in depth use might be thermoregulatory, although evidence for this is indirect. The mean linear home range for all turtles was 777.8 m. Females had larger home ranges than males, and juveniles had larger home ranges than adults, although the latter was not statistically significant. Macrochelys temminckii used submerged structures as a core site, and stayed at each core site for an average of 12.3 d.

Fine-scale genetic population structure in a mobile marine mammal: inshore bottlenose dolphins in Moreton Bay, Australia.

PubMed

Ansmann, Ina C; Parra, Guido J; Lanyon, Janet M; Seddon, Jennifer M

2012-09-01

Highly mobile marine species in areas with no obvious geographic barriers are expected to show low levels of genetic differentiation. However, small-scale variation in habitat may lead to resource polymorphisms and drive local differentiation by adaptive divergence. Using nuclear microsatellite genotyping at 20 loci, and mitochondrial control region sequencing, we investigated fine-scale population structuring of inshore bottlenose dolphins (Tursiops aduncus) inhabiting a range of habitats in and around Moreton Bay, Australia. Bayesian structure analysis identified two genetic clusters within Moreton Bay, with evidence of admixture between them (F(ST) = 0.05, P = 0.001). There was only weak isolation by distance but one cluster of dolphins was more likely to be found in shallow southern areas and the other in the deeper waters of the central northern bay. In further analysis removing admixed individuals, southern dolphins appeared genetically restricted with lower levels of variation (AR = 3.252, π = 0.003) and high mean relatedness (r = 0.239) between individuals. In contrast, northern dolphins were more diverse (AR = 4.850, π = 0.009) and were mixing with a group of dolphins outside the bay (microsatellite-based STRUCTURE analysis), which appears to have historically been distinct from the bay dolphins (mtDNA Φ(ST) = 0.272, P < 0.001). This study demonstrates the ability of genetic techniques to expose fine-scale patterns of population structure and explore their origins and mechanisms. A complex variety of inter-related factors including local habitat variation, differential resource use, social behaviour and learning, and anthropogenic disturbances are likely to have played a role in driving fine-scale population structure among bottlenose dolphins in Moreton Bay. © 2012 Blackwell Publishing Ltd.

Evaluation of a Spatial Data Management System for Basic Skills Education

DTIC Science & Technology

1986-03-01

levels (see Craik & Lockhart , 1972). These methods include verbal and imaginal elaboration (Weinstein, 1978; Weinstein et al., 1979), and a variety of...strategies at a more specific level . I . Information processing strategies are methods to aid acquisition, retention, or retrieval of information. These...methods generally are designed to force students to process information at deeper, semantic or imaginal, levels of processing , rather than at shallower

Complex band structure and electronic transmission eigenchannels

NASA Astrophysics Data System (ADS)

Jensen, Anders; Strange, Mikkel; Smidstrup, Søren; Stokbro, Kurt; Solomon, Gemma C.; Reuter, Matthew G.

2017-12-01

It is natural to characterize materials in transport junctions by their conductance length dependence, β. Theoretical estimations of β are made employing two primary theories: complex band structure and density functional theory (DFT) Landauer transport. It has previously been shown that the β value derived from total Landauer transmission can be related to the β value from the smallest |ki| complex band; however, it is an open question whether there is a deeper relationship between the two. Here we probe the details of the relationship between transmission and complex band structure, in this case individual eigenchannel transmissions and different complex bands. We present calculations of decay constants for the two most conductive states as determined by complex band structure and standard DFT Landauer transport calculations for one semi-conductor and two molecular junctions. The molecular junctions show that both the length dependence of the total transmission and the individual transmission eigenvalues can be, almost always, found through the complex band structure. The complex band structure of the semi-conducting material, however, does not predict the length dependence of the total transmission but only of the individual channels, at some k-points, due to multiple channels contributing to transmission. We also observe instances of vertical bands, some of which are the smallest |ki| complex bands, that do not contribute to transport. By understanding the deeper relationship between complex bands and individual transmission eigenchannels, we can make a general statement about when the previously accepted wisdom linking transmission and complex band structure will fail, namely, when multiple channels contribute significantly to the transmission.

Civic Education and Deeper Learning. Deeper Learning Research Series

ERIC Educational Resources Information Center

Levine, Peter; Kawashima-Ginsberg, Kei

2015-01-01

This report proposes that the turn toward deeper learning in education reform should go hand in hand with a renewed emphasis on high-quality civics education. Not only does deeper learning have great potential to promote civic outcomes and strengthen our democracy but, at the same time, civic education exemplifies deeper learning, in that it…

Peppytides: Interactive Models of Polypeptide Chains

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zuckermann, Ron; Chakraborty, Promita; Derisi, Joe

2014-01-21

Peppytides are scaled, 3D-printed models of polypeptide chains that can be folded into accurate protein structures. Designed and created by Berkeley Lab Researcher, Promita Chakraborty, and Berkeley Lab Senior Scientist, Dr. Ron Zuckermann, Peppytides are accurate physical models of polypeptide chains that anyone can interact with and fold intro various protein structures - proving to be a great educational tool, resulting in a deeper understanding of these fascinating structures and how they function. Build your own Peppytide model and learn about how nature's machines fold into their intricate architectures!

Peppytides: Interactive Models of Polypeptide Chains

ScienceCinema

Zuckermann, Ron; Chakraborty, Promita; Derisi, Joe

2018-06-08

Peppytides are scaled, 3D-printed models of polypeptide chains that can be folded into accurate protein structures. Designed and created by Berkeley Lab Researcher, Promita Chakraborty, and Berkeley Lab Senior Scientist, Dr. Ron Zuckermann, Peppytides are accurate physical models of polypeptide chains that anyone can interact with and fold intro various protein structures - proving to be a great educational tool, resulting in a deeper understanding of these fascinating structures and how they function. Build your own Peppytide model and learn about how nature's machines fold into their intricate architectures!

DSSR-enhanced visualization of nucleic acid structures in Jmol

PubMed Central

Hanson, Robert M.

2017-01-01

Abstract Sophisticated and interactive visualizations are essential for making sense of the intricate 3D structures of macromolecules. For proteins, secondary structural components are routinely featured in molecular graphics visualizations. However, the field of RNA structural bioinformatics is still lagging behind; for example, current molecular graphics tools lack built-in support even for base pairs, double helices, or hairpin loops. DSSR (Dissecting the Spatial Structure of RNA) is an integrated and automated command-line tool for the analysis and annotation of RNA tertiary structures. It calculates a comprehensive and unique set of features for characterizing RNA, as well as DNA structures. Jmol is a widely used, open-source Java viewer for 3D structures, with a powerful scripting language. JSmol, its reincarnation based on native JavaScript, has a predominant position in the post Java-applet era for web-based visualization of molecular structures. The DSSR-Jmol integration presented here makes salient features of DSSR readily accessible, either via the Java-based Jmol application itself, or its HTML5-based equivalent, JSmol. The DSSR web service accepts 3D coordinate files (in mmCIF or PDB format) initiated from a Jmol or JSmol session and returns DSSR-derived structural features in JSON format. This seamless combination of DSSR and Jmol/JSmol brings the molecular graphics of 3D RNA structures to a similar level as that for proteins, and enables a much deeper analysis of structural characteristics. It fills a gap in RNA structural bioinformatics, and is freely accessible (via the Jmol application or the JSmol-based website http://jmol.x3dna.org). PMID:28472503

The connectivity structure, giant strong component and centrality of metabolic networks.

PubMed

Ma, Hong-Wu; Zeng, An-Ping

2003-07-22

Structural and functional analysis of genome-based large-scale metabolic networks is important for understanding the design principles and regulation of the metabolism at a system level. The metabolic network is conventionally considered to be highly integrated and very complex. A rational reduction of the metabolic network to its core structure and a deeper understanding of its functional modules are important. In this work, we show that the metabolites in a metabolic network are far from fully connected. A connectivity structure consisting of four major subsets of metabolites and reactions, i.e. a fully connected sub-network, a substrate subset, a product subset and an isolated subset is found to exist in metabolic networks of 65 fully sequenced organisms. The largest fully connected part of a metabolic network, called 'the giant strong component (GSC)', represents the most complicated part and the core of the network and has the feature of scale-free networks. The average path length of the whole network is primarily determined by that of the GSC. For most of the organisms, GSC normally contains less than one-third of the nodes of the network. This connectivity structure is very similar to the 'bow-tie' structure of World Wide Web. Our results indicate that the bow-tie structure may be common for large-scale directed networks. More importantly, the uncovered structure feature makes a structural and functional analysis of large-scale metabolic network more amenable. As shown in this work, comparing the closeness centrality of the nodes in the GSC can identify the most central metabolites of a metabolic network. To quantitatively characterize the overall connection structure of the GSC we introduced the term 'overall closeness centralization index (OCCI)'. OCCI correlates well with the average path length of the GSC and is a useful parameter for a system-level comparison of metabolic networks of different organisms. http://genome.gbf.de/bioinformatics/

Vacancy-impurity centers in diamond: prospects for synthesis and applications

NASA Astrophysics Data System (ADS)

Ekimov, E. A.; Kondrin, M. V.

2017-06-01

The bright luminescence of impurity-vacancy complexes, combined with high chemical and radiation resistance, makes diamond an attractive platform for the production of single-photon emitters and luminescent biomarkers for applications in nanoelectronics and medicine. Two representatives of this kind of defects in diamond, silicon-vacancy (SiV) and germanium-vacancy (GeV) centers, are discussed in this review; their similarities and differences are demonstrated in terms of the more thoroughly studied nitrogen-vacancy (NV) complexes. The recent discovery of GeV luminescent centers opens a unique opportunity for the controlled synthesis of single-photon emitters in nanodiamonds. We demonstrate prospects for the high-pressure high-temperature (HPHT) technique to create single-photon emitters, not only as an auxiliary to chemical vapor deposition (CVD) and ion-implantation methods but also as a primary synthesis tool for producing color centers in nanodiamonds. Besides practical applications, comparative studies of these two complexes, which belong to the same structural class of defects, have a fundamental importance for deeper understanding of shelving levels, the electronic structure, and optical properties of these centers. In conclusion, we discuss several open problems regarding the structure, charge state, and practical application of these centers, which still require a solution.

Observation of ion acceleration and heating during collisionless magnetic reconnection in a laboratory plasma.

PubMed

Yoo, Jongsoo; Yamada, Masaaki; Ji, Hantao; Myers, Clayton E

2013-05-24

The ion dynamics in a collisionless magnetic reconnection layer are studied in a laboratory plasma. The measured in-plane plasma potential profile, which is established by electrons accelerated around the electron diffusion region, shows a saddle-shaped structure that is wider and deeper towards the outflow direction. This potential structure ballistically accelerates ions near the separatrices toward the outflow direction. Ions are heated as they travel into the high-pressure downstream region.

Cognitive Effects of Bilingualism: Digging Deeper for the Contributions of Language Dominance, Linguistic Knowledge, Socio-Economic Status and Cognitive Abilities

ERIC Educational Resources Information Center

Mueller Gathercole, Virginia C.; Thomas, Enlli Mon; Jones, Leah; Guasch, Nestor Vinas; Young, Nia; Hughes, Emma K.

2010-01-01

This study explores the extent to which a bilingual advantage can be observed for executive function tasks in children of varying levels of language dominance, and examines the contributions of general cognitive knowledge, linguistic abilities, language use and socio-economic level to performance. Welsh-English bilingual and English monolingual…

Geophysical exploration on the subsurface geology of La Garrotxa monogenetic volcanic field (NE Iberian Peninsula)

NASA Astrophysics Data System (ADS)

Bolós, Xavier; Barde-Cabusson, Stéphanie; Pedrazzi, Dario; Martí, Joan; Casas, Albert; Lovera, Raúl; Nadal-Sala, Daniel

2014-11-01

We applied self-potential (SP) and electrical resistivity tomography (ERT) to the exploration of the uppermost part of the substrate geology and shallow structure of La Garrotxa monogenetic volcanic field, part of the European Neogene-Quaternary volcanic province. The aim of the study was to improve knowledge of the shallowest part of the feeding system of these monogenetic volcanoes and of its relationship with the subsurface geology. This study complements previous geophysical studies carried out at a less detailed scale and aimed at identifying deeper structures, and together will constitute the basis to establish volcanic susceptibility in La Garrotxa. SP study complemented previous smaller-scale studies and targeted key areas where ERT could be conducted. The main new results include the generation of resistivity models identifying dykes and faults associated with several monogenetic cones. The combined results confirm that shallow tectonics controlling the distribution of the foci of eruptive activity in this volcanic zone mainly correspond to NNW-SSE and accessorily by NNE-SSW Neogene extensional fissures and faults and concretely show the associated magmatic intrusions. These structures coincide with the deeper ones identified in previous studies, and show that previous Alpine tectonic structures played no apparent role in controlling the loci of this volcanism. Moreover, the results obtained show that the changes in eruption dynamics occurring at different vents located at relatively short distances in this volcanic area are controlled by shallow stratigraphical, structural and hydrogeological differences underneath these monogenetic volcanoes.

Investigation of aquifer-system compaction in the Hueco basin, El Paso, Texas, USA

USGS Publications Warehouse

Heywood, Charles

1995-01-01

The Pleistocene geologic history of the Rio Grande valley in the Hueco basin included a cycle of sediment erosion and re-aggradation, resulting in unconformable stratification of sediment of contrasting compressibility and stress history. Since the 1950s large groundwater withdrawals have resulted in significant water-level declines and associated land subsidence. Knowledge of the magnitude and variation of specific storage is needed for developing predictive models of subsidence and groundwater flow simulations. Analyses of piezometric and extensometric data in the form of stress-strain diagrams from a 16 month period yield in situ measurements of aquifer-system compressibility across two discrete aquifer intervals. The linear elastic behaviour of the deeper interval indicates over-consolidation of basin deposits, probably resulting from deeper burial depth before the middle Pleistocene. By contrast, the shallow aquifer system displays an inelastic component, suggesting pre-consolidation stress not significantly greater than current effective stress levels for a sequence of late Pleistocene clay. Harmonic analyses of the piezometric response to earth tides in two water-level piezometers provide an independent estimate of specific storage of aquifer sands.

The Essence of Using Collaborative Technology for Virtual Team Members: A Study Using Interpretative Phenomenology

ERIC Educational Resources Information Center

Houck, Christiana L.

2013-01-01

This interpretative phenomenological study used semi-structured interviews of 10 participants to gain a deeper understanding of the experience for virtual team members using collaborative technology. The participants were knowledge workers from global software companies working on cross-functional project teams at a distance. There were no…

Digging Deeper Using Neuroimaging Tools Reveals Important Clues to Early-Onset Schizophrenia

ERIC Educational Resources Information Center

Kumra, Sanjiv

2008-01-01

The article describes the use of structural neuroimaging to understand the psychopathology of childhood-onset schizophrenia. Results showed an increase in lateral volumes, reduced total and regional volumes of gray matter in the cortex and increased basal ganglia volumes as in adult-onset schizophrenia in comparison with healthy subjects.

Biodiversity in intertidal rock pools: informing engineering criteria for artificial habitat enhancement in the built environment.

PubMed

Firth, Louise B; Schofield, Meredith; White, Freya J; Skov, Martin W; Hawkins, Stephen J

2014-12-01

Coastal defence structures are proliferating to counter rising and stormier seas. With increasing concern about the ecological value of built environments, efforts are being made to create novel habitat to increase biodiversity. Rock pools are infrequent on artificial structures. We compared biodiversity patterns between rock pools and emergent rock and assessed the role of pool depth and substratum incline in determining patterns of biodiversity. Rock pools were more taxon rich than emergent substrata. Patterns varied with depth and incline with algal groups being more positively associated with shallow than deeper habitats. Substratum incline had little influence on colonising epibiota, with the exception of canopy algae in deeper habitats where vertical surfaces supported greater taxon richness than horizontal surfaces. The creation of artificial rock pools in built environments will have a positive effect on biodiversity. Building pools of varying depths and inclines and shore heights will provide a range of habitats, increase environmental heterogeneity, therefore creating more possible ecological niches, promoting local biodiversity. Copyright © 2014 Elsevier Ltd. All rights reserved.

A Computational Approach From Gene to Structure Analysis of the Human ABCA4 Transporter Involved in Genetic Retinal Diseases.

PubMed

Trezza, Alfonso; Bernini, Andrea; Langella, Andrea; Ascher, David B; Pires, Douglas E V; Sodi, Andrea; Passerini, Ilaria; Pelo, Elisabetta; Rizzo, Stanislao; Niccolai, Neri; Spiga, Ottavia

2017-10-01

The aim of this article is to report the investigation of the structural features of ABCA4, a protein associated with a genetic retinal disease. A new database collecting knowledge of ABCA4 structure may facilitate predictions about the possible functional consequences of gene mutations observed in clinical practice. In order to correlate structural and functional effects of the observed mutations, the structure of mouse P-glycoprotein was used as a template for homology modeling. The obtained structural information and genetic data are the basis of our relational database (ABCA4Database). Sequence variability among all ABCA4-deposited entries was calculated and reported as Shannon entropy score at the residue level. The three-dimensional model of ABCA4 structure was used to locate the spatial distribution of the observed variable regions. Our predictions from structural in silico tools were able to accurately link the functional effects of mutations to phenotype. The development of the ABCA4Database gathers all the available genetic and structural information, yielding a global view of the molecular basis of some retinal diseases. ABCA4 modeled structure provides a molecular basis on which to analyze protein sequence mutations related to genetic retinal disease in order to predict the risk of retinal disease across all possible ABCA4 mutations. Additionally, our ABCA4 predicted structure is a good starting point for the creation of a new data analysis model, appropriate for precision medicine, in order to develop a deeper knowledge network of the disease and to improve the management of patients.

Deep Structure of the Earth and Concentration of Metals in the Lithosphere: A Geodynamic Approach

NASA Technical Reports Server (NTRS)

Taylor, Patrick T.; Kutina, J.; Pei, R.

2004-01-01

A discussion of and introduction to satellite-altitude geopotential fields studies and their interpretation with emphasis on results from metalliferous regions will be given. The magnetic and gravimetric measurements from satellite altitudes show heterogeneity in deeper parts of the lithosphere. These patterns of magnetic anomalies do not only reveal the largest iron ore deposits such as Kiruna, Sweden and Kursk, Russia, but also linear features indicating structural discontinuities. Changes of magnetic amplitude of these patterns are caused by intersecting transverse fractures localizing magmatism and concentration of metals. The role of trans-regional mantle-rooted structural discontinuities in the concentration of metals will be discussed and a new type of mineral prognosis map will be presented. Deep-rooted structural discontinuities, defined by combination of geological and geophysical criteria, with spacing of several hundred kilometers, reveal a quite uniform pattern in the deeper parts of the lithosphere. As these structures provide favorable pathways for the ascent of heat, magmas and ore-forming fluids, their recognition is of crucial importance and can be used in the compilation of a new type of mineral prognosis map. Examples are shown from the United States, Canada, China, Burma, South America, Europe and Australia. The European example includes a pattern of east west trending structural discontinuities or belts and their junction with the NW-trending Tornqvist-Teisseyre Line. The Upper Silesian-Cracovian Zn-Pb district occurs along one of the latitudinal belts. Leslaw Teper of the University of Silesia has been invited to show the fractures in crystalline basement beneath the sediments hosting the Zn-Pb ores.

Vertical stratification of subsurface microbial community composition across geological formations at the Hanford Site.

PubMed

Lin, Xueju; Kennedy, David; Fredrickson, Jim; Bjornstad, Bruce; Konopka, Allan

2012-02-01

Microbial diversity in subsurface sediments at the Hanford Site 300 Area near Richland, Washington state (USA) was investigated by analysing 21 samples recovered from depths of 9-52 m. Approximately 8000 near full-length 16S rRNA gene sequences were analysed across geological strata that include a natural redox transition zone. These strata included the oxic coarse-grained Hanford formation, fine-grained oxic and anoxic Ringold Formation sediments, and the weathered basalt group. We detected 1233 and 120 unique bacterial and archaeal OTUs (operational taxonomic units at the 97% identity level) respectively. Microbial community structure and richness varied substantially across the different geological strata. Bacterial OTU richness (Chao1 estimator) was highest (> 700) in the upper Hanford formation, and declined to about 120 at the bottom of the Hanford formation. Just above the Ringold oxic-anoxic interface, richness was about 325 and declined to less than 50 in the deeper reduced zones. The deeper Ringold strata were characterized by a preponderance (c. 90%) of Proteobacteria. The bacterial community in the oxic sediments contained not only members of nine well-recognized phyla but also an unusually high proportion of three candidate divisions (GAL15, NC10 and SPAM). Additionally, 13 novel phylogenetic orders were identified within the Deltaproteobacteria, a clade rich in microbes that carry out redox transformations of metals that are important contaminants on the Hanford Site. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

Patients´ Variations of Reflection About and Understanding of Long-Term Illness- Impact of Illness Perception on Trust in Oneself or Others

PubMed Central

Nunstedt, Håkan; Rudolfsson, Gudrun; Alsen, Pia; Pennbrant, Sandra

2017-01-01

Background: Patients' understanding of their illness is of great importance for recovery. Lacking understanding of the illness is linked with the patients' level of reflection about and interest in understanding their illness. Objective: To describe patients’ variations of reflection about and understanding of their illness and how this understanding affects their trust in themselves or others. Method: The study is based on the “Illness perception” model. Latent content analysis was used for the data analysis. Individual, semi-structured, open-ended and face-to-face interviews were conducted with patients (n=11) suffering from a long-term illness diagnosed at least six months prior to the interview. Data collection took place in the three primary healthcare centres treating the participants. Results: The results show variations in the degree of reflection about illness. Patients search for deeper understanding of the illness for causal explanations, compare different perspectives for preventing complication of their illness, trust healthcare providers, and develop own strategies to manage life. Conclusion: Whereas some patients search for deeper understanding of their illness, other patients are less reflective and feel they can manage the illness without further understanding. Patients' understanding of their illness is related to their degree of trust in themselves or others. Patients whose illness poses an existential threat are more likely to reflect more about their illness and what treatment methods are available. PMID:28567169

27 years of benthic and coral community dynamics on turbid, highly urbanised reefs off Singapore.

PubMed

Guest, J R; Tun, K; Low, J; Vergés, A; Marzinelli, E M; Campbell, A H; Bauman, A G; Feary, D A; Chou, L M; Steinberg, P D

2016-11-08

Coral cover on reefs is declining globally due to coastal development, overfishing and climate change. Reefs isolated from direct human influence can recover from natural acute disturbances, but little is known about long term recovery of reefs experiencing chronic human disturbances. Here we investigate responses to acute bleaching disturbances on turbid reefs off Singapore, at two depths over a period of 27 years. Coral cover declined and there were marked changes in coral and benthic community structure during the first decade of monitoring at both depths. At shallower reef crest sites (3-4 m), benthic community structure recovered towards pre-disturbance states within a decade. In contrast, there was a net decline in coral cover and continuing shifts in community structure at deeper reef slope sites (6-7 m). There was no evidence of phase shifts to macroalgal dominance but coral habitats at deeper sites were replaced by unstable substrata such as fine sediments and rubble. The persistence of coral dominance at chronically disturbed shallow sites is likely due to an abundance of coral taxa which are tolerant to environmental stress. In addition, high turbidity may interact antagonistically with other disturbances to reduce the impact of thermal stress and limit macroalgal growth rates.

Electrically Conductive Plumes Rising From the Mantle Transition Zone in the Andean Back-Arc of Argentina from 30 to 40° South

NASA Astrophysics Data System (ADS)

Booker, J. R.; Burd, A. I.; Mackie, R.

2011-12-01

Three-dimensional interpretation of a large number of magnetotelluric sites in the Andean back arc of Argentina reveals at least two near-vertical conductive structures that extend from near the top of the mantle transition zone to the base of the lithosphere. Both are of limited horizontal extent. One is near the eastern-most extent of the Nazca flat-slab. It penetrates the most reasonable down-dip extension of the seismogenic subducted slab and suggests that the slab may not extend much deeper than about 200 km. The other is south of the flat-slab region and just east of the large Payun-Matru basaltic volcanic province. It arises roughly where the subducted slab would meet the transition zone if the slab extends linearly down from where it is seismogenic. It is tempting to conclude that both structures are partially molten plumes arising from the transition zone or deeper. The flat-slab plume has not penetrated the compressive lithosphere of the Sierras Pampeanas. The Payunia plume would logically seem connected to the geologically recent OIB-like volcanism near Payun Matru, but the shallow mantle structure beneath the area of most recent activity seems better explained by a connection to the Andean volcanism to the west.

27 years of benthic and coral community dynamics on turbid, highly urbanised reefs off Singapore

PubMed Central

Guest, J. R.; Tun, K.; Low, J.; Vergés, A.; Marzinelli, E. M.; Campbell, A. H.; Bauman, A. G.; Feary, D. A.; Chou, L. M.; Steinberg, P. D.

2016-01-01

Coral cover on reefs is declining globally due to coastal development, overfishing and climate change. Reefs isolated from direct human influence can recover from natural acute disturbances, but little is known about long term recovery of reefs experiencing chronic human disturbances. Here we investigate responses to acute bleaching disturbances on turbid reefs off Singapore, at two depths over a period of 27 years. Coral cover declined and there were marked changes in coral and benthic community structure during the first decade of monitoring at both depths. At shallower reef crest sites (3–4 m), benthic community structure recovered towards pre-disturbance states within a decade. In contrast, there was a net decline in coral cover and continuing shifts in community structure at deeper reef slope sites (6–7 m). There was no evidence of phase shifts to macroalgal dominance but coral habitats at deeper sites were replaced by unstable substrata such as fine sediments and rubble. The persistence of coral dominance at chronically disturbed shallow sites is likely due to an abundance of coral taxa which are tolerant to environmental stress. In addition, high turbidity may interact antagonistically with other disturbances to reduce the impact of thermal stress and limit macroalgal growth rates. PMID:27824083

Fractal structure enables temporal prediction in music.

PubMed

Rankin, Summer K; Fink, Philip W; Large, Edward W

2014-10-01

1/f serial correlations and statistical self-similarity (fractal structure) have been measured in various dimensions of musical compositions. Musical performances also display 1/f properties in expressive tempo fluctuations, and listeners predict tempo changes when synchronizing. Here the authors show that the 1/f structure is sufficient for listeners to predict the onset times of upcoming musical events. These results reveal what information listeners use to anticipate events in complex, non-isochronous acoustic rhythms, and this will entail innovative models of temporal synchronization. This finding could improve therapies for Parkinson's and related disorders and inform deeper understanding of how endogenous neural rhythms anticipate events in complex, temporally structured communication signals.

Micro-Macro Analysis of Complex Networks

PubMed Central

Marchiori, Massimo; Possamai, Lino

2015-01-01

Complex systems have attracted considerable interest because of their wide range of applications, and are often studied via a “classic” approach: study a specific system, find a complex network behind it, and analyze the corresponding properties. This simple methodology has produced a great deal of interesting results, but relies on an often implicit underlying assumption: the level of detail on which the system is observed. However, in many situations, physical or abstract, the level of detail can be one out of many, and might also depend on intrinsic limitations in viewing the data with a different level of abstraction or precision. So, a fundamental question arises: do properties of a network depend on its level of observability, or are they invariant? If there is a dependence, then an apparently correct network modeling could in fact just be a bad approximation of the true behavior of a complex system. In order to answer this question, we propose a novel micro-macro analysis of complex systems that quantitatively describes how the structure of complex networks varies as a function of the detail level. To this extent, we have developed a new telescopic algorithm that abstracts from the local properties of a system and reconstructs the original structure according to a fuzziness level. This way we can study what happens when passing from a fine level of detail (“micro”) to a different scale level (“macro”), and analyze the corresponding behavior in this transition, obtaining a deeper spectrum analysis. The obtained results show that many important properties are not universally invariant with respect to the level of detail, but instead strongly depend on the specific level on which a network is observed. Therefore, caution should be taken in every situation where a complex network is considered, if its context allows for different levels of observability. PMID:25635812

Lanthanide complexes with aromatic o-phosphorylated ligands: synthesis, structure elucidation and photophysical properties.

PubMed

Shuvaev, Sergey; Utochnikova, Valentina; Marciniak, Łukasz; Freidzon, Alexandra; Sinev, Ilya; Van Deun, Rik; Freire, Ricardo O; Zubavichus, Yan; Grünert, Wolfgang; Kuzmina, Natalia

2014-02-28

Lanthanide complexes LnL3 (Ln = Sm, Eu, Tb, Dy, Tm, Yb, Lu) with aromatic o-phosphorylated ligands (HL(1) and HL(2)) have been synthesized and identified. Their molecular structure was proposed on the basis of a new complex approach, including DFT calculations, Sparkle/PM3 modelling, EXAFS spectroscopy and luminescent probing. The photophysical properties of all of the complexes were investigated in detail to obtain a deeper insight into the energy transfer processes.

Vibrational spectroscopic study of dehydroacetic acid and its cinnamoyl pyrone derivatives

NASA Astrophysics Data System (ADS)

Billes, Ferenc; Elečková, Lenka; Mikosch, Hans; Andruch, Vasil

2015-07-01

The infrared and Raman spectra of dehydroacetic acid and some of its derivatives were measured. The assignments of the vibrational bands were based on quantum chemical calculations and normal coordinate analysis. The optimized structures, atomic net charges and dipole moments of the investigated molecules were also results of our quantum chemical calculations. The analysis of the last properties made possible a deeper insight into the structure and substituent effect on the investigated molecules. One of them is presented in the graphical abstract.

Improving Photovoltaic Performance of a Fused-Ring Azepinedione Copolymer via a D-A-A Design.

PubMed

Zhang, Honghong; Li, Ting; Xiao, Zuo; Lei, Zhongli; Ding, Liming

2018-04-01

Two conjugated copolymer donors, PTTABDT and PBTTABDT, based on a fused-ring azepinedione acceptor unit, 5-(2-octyldodecyl)-4H-thieno[2',3':4,5]thieno[3,2-c]thieno[2',3':4,5]thieno[2,3-e]azepine-4,6(5H)-dione (TTA), are prepared. PTTABDT possesses a conventional donor-acceptor (D-A) structure with one TTA in the repeat unit, while PBTTABDT has a D-A-A structure with two TTAs in the repeat unit. Compared with PTTABDT, PBTTABDT shows a deeper highest occupied molecular orbital (HOMO) level, a narrower bandgap, and a higher hole mobility, and exhibits better performance in bulk heterojunction solar cells. Power conversion efficiencies of 6.18% and 7.81% are achieved from PTTABDT:PC 71 BM and PBTTABDT:PC 71 BM solar cells, respectively. The higher performance of PBTTABDT:PC 71 BM solar cells results from the enhanced open-circuit voltage (V oc ) and short-circuit current density (  J sc ). © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Magnetic

NASA Astrophysics Data System (ADS)

Aboud, Essam; El-Masry, Nabil; Qaddah, Atef; Alqahtani, Faisal; Moufti, Mohammed R. H.

2015-06-01

The Rahat volcanic field represents one of the widely distributed Cenozoic volcanic fields across the western regions of the Arabian Peninsula. Its human significance stems from the fact that its northern fringes, where the historical eruption of 1256 A.D. took place, are very close to the holy city of Al-Madinah Al-Monawarah. In the present work, we analyzed aeromagnetic data from the northern part of Rahat volcanic field as well as carried out a ground gravity survey. A joint interpretation and inversion of gravity and magnetic data were used to estimate the thickness of the lava flows, delineate the subsurface structures of the study area, and estimate the depth to basement using various geophysical methods, such as Tilt Derivative, Euler Deconvolution and 2D modeling inversion. Results indicated that the thickness of the lava flows in the study area ranges between 100 m (above Sea Level) at the eastern and western boundaries of Rahat Volcanic field and getting deeper at the middle as 300-500 m. It also showed that, major structural trend is in the NW direction (Red Sea trend) with some minor trends in EW direction.

Landscape-scale changes in forest canopy structure across a partially logged tropical peat swamp

NASA Astrophysics Data System (ADS)

Wedeux, B. M. M.; Coomes, D. A.

2015-07-01

Forest canopy structure is strongly influenced by environmental factors and disturbance, and in turn influences key ecosystem processes including productivity, evapotranspiration and habitat availability. In tropical forests increasingly modified by human activities, the interplaying effects of environmental factors and disturbance legacies on forest canopy structure across landscapes are practically unexplored. We used high-fidelity airborne laser scanning (ALS) data to measure the canopy of old-growth and selectively logged peat swamp forest across a peat dome in Central Kalimantan, Indonesia, and quantified how canopy structure metrics varied with peat depth and under logging. Several million canopy gaps in different height cross-sections of the canopy were measured in 100 plots of 1 km2 spanning the peat dome, allowing us to describe canopy structure with seven metrics. Old-growth forest became shorter and had simpler vertical canopy profiles on deeper peat, consistently with previous work linking deep peat to stunted tree growth. Gap Size Frequency Distributions (GSFDs) indicated fewer and smaller canopy gaps on the deeper peat (i.e. the scaling exponent of pareto functions increased from 1.76 to 3.76 with peat depth). Areas subjected to concessionary logging until 2000, and informal logging since then, had the same canopy top height as old-growth forest, indicating the persistence of some large trees, but mean canopy height was significantly reduced; the total area of canopy gaps increased and the GSFD scaling exponent was reduced. Logging effects were most evident on the deepest peat, where nutrient depletion and waterlogged conditions restrain tree growth and recovery. A tight relationship exists between canopy structure and the peat deph gradient within the old-growth tropical peat swamp. This relationship breaks down after selective logging, with canopy structural recovery being modulated by environmental conditions.

The effects of femtosecond laser-textured Ti-6Al-4V on wettability and cell response.

PubMed

Raimbault, Ophélie; Benayoun, Stephane; Anselme, Karine; Mauclair, Cyril; Bourgade, Tatiana; Kietzig, Anne-Marie; Girard-Lauriault, Pierre-Luc; Valette, Stephane; Donnet, Christophe

2016-12-01

To study the biological activity effects of femtosecond laser-induced structures on cell behavior, TA6V samples were micro-textured with focused femtosecond laser pulses generating grooves of various dimensions on the micrometer scale (width: 25-75μm; depth: 1-10μm). LIPSS (Laser Induced Periodic Surface Structures) were also generated during the laser irradiation, providing a supplementary structure (sinusoidal form) of hundreds of nanometers at the bottom of the grooves oriented perpendicular (⊥ LIPPS) or parallel (// LIPPS) to the direction of these grooves. C3H10 T1/2 murine mesenchymal stem cells were cultivated on the textured biomaterials. To have a preliminary idea of the spreading of biological media on the substrate, prior to cell culture, contact angle measurement were performed. This showed that the post-irradiation hydrophilicity of the samples can decrease with time according to its storage environment. The multiscale structuration either induced a collaborative or a competitive influence of the LIPSS and grooves on the cells. It has been shown that cells individually and collectively were most sensitive to microscale grooves which were narrower than 25μm and deeper than 5μm with ⊥ LIPPS. In some cases, cells were individually sensitive to the LIPSS but the cell layer organization did not exhibit significant differences in comparison to a non-textured surface. These results showed that cells are more sensitive to the nanoscale structures (LIPSS), unless the microstructures's size is close to the cell size and deeper than 5μm. There, the cells are sensitive to the microscale structures and go on spreading following these structures. Copyright © 2016 Elsevier B.V. All rights reserved.

Experimental evidence of trap level modulation in silicon nitride thin films by hydrogen annealing

NASA Astrophysics Data System (ADS)

Seki, Harumi; Kamimuta, Yuuichi; Mitani, Yuichiro

2018-06-01

The energy level of electron traps in silicon nitride (SiN x ) thin films was investigated by discharging current transient spectroscopy (DCTS). Results indicate that the trap level of the SiN x thin films becomes deeper with decreasing composition (N/Si) and shallower after hydrogen annealing. The dependence of the trap level on the SiN x composition and the modulation of the trap level by hydrogen annealing are possibly related to the change in the number of Si–H bonds in the SiN x thin films.

Cultural Understanding: French, Level One. Selected Cultural Concepts Which May Be Developed in French Level I.

ERIC Educational Resources Information Center

Walpole, Earl L.

This manual was prepared to instruct the language teacher on concepts of French culture to be taught in a beginning French class to students of any age. The cultural concepts are cross-referenced and intended to be used with five of the most widely used French texts. Certain deeper cultural concepts are meant to be used for longer unit…

Addressing Structural and Environmental Factors for Adolescent Sexual and Reproductive Health in Low- and Middle-Income Countries

PubMed Central

Mmari, Kristin

2015-01-01

A deeper understanding of how structure and environment shape the sexual and reproductive health vulnerabilities of youths across a range of outcomes has implications for the development of successful policies and programs. We have discussed some of the key structural and environmental factors that influence the sexual and reproductive health of adolescents, particularly in low- and middle-income countries, and the importance of engaging adolescents in identifying solutions. We have highlighted 2 case studies that describe structural or environmental approaches to improving adolescent sexual and reproductive health and made recommendations to more systematically incorporate attention to structure and environment to improve global adolescent health. PMID:26270290

Addressing Structural and Environmental Factors for Adolescent Sexual and Reproductive Health in Low- and Middle-Income Countries.

PubMed

Sommer, Marni; Mmari, Kristin

2015-10-01

A deeper understanding of how structure and environment shape the sexual and reproductive health vulnerabilities of youths across a range of outcomes has implications for the development of successful policies and programs. We have discussed some of the key structural and environmental factors that influence the sexual and reproductive health of adolescents, particularly in low- and middle-income countries, and the importance of engaging adolescents in identifying solutions. We have highlighted 2 case studies that describe structural or environmental approaches to improving adolescent sexual and reproductive health and made recommendations to more systematically incorporate attention to structure and environment to improve global adolescent health.

Atmospheric Structure and Diurnal Variations at Low Altitudes in the Martian Tropics

NASA Astrophysics Data System (ADS)

Hinson, David P.; Spiga, A.; Lewis, S.; Tellmann, S.; Pätzold, M.; Asmar, S.; Häusler, B.

2013-10-01

We are using radio occultation measurements from Mars Express, Mars Reconnaissance Orbiter, and Mars Global Surveyor to characterize the diurnal cycle in the lowest scale height above the surface. We focus on northern spring and summer, using observations from 4 Martian years at local times of 4-5 and 15-17 h. We supplement the observations with results obtained from large-eddy simulations and through data assimilation by the UK spectral version of the LMD Mars Global Circulation Model. We previously investigated the depth of the daytime convective boundary layer (CBL) and its variations with surface elevation and surface properties. We are now examining unusual aspects of the temperature structure observed at night. Most important, predawn profiles in the Tharsis region contain an unexpected layer of neutral static stability at pressures of 200-300 Pa with a depth of 4-5 km. The mixed layer is bounded above by a midlevel temperature inversion and below by another strong inversion adjacent to the surface. The narrow temperature minimum at the base of the midlevel inversion suggests the presence of a water ice cloud layer, with the further implication that radiative cooling at cloud level can induce convective activity at lower altitudes. Conversely, nighttime profiles in Amazonis show no sign of a midlevel inversion or a detached mixed layer. These regional variations in the nighttime temperature structure appear to arise in part from large-scale variations in topography, which have several notable effects. First, the CBL is much deeper in the Tharsis region than in Amazonis, owing to a roughly 6-km difference in surface elevation. Second, large-eddy simulations show that daytime convection is not only deeper above Tharsis but also considerably more intense than it is in Amazonis. Finally, the daytime surface temperatures are comparable in the two regions, so that Tharsis acts as an elevated heat source throughout the CBL. These topographic effects are expected to enhance the vertical mixing of water vapor above elevated terrain, which might lead to the formation and regional confinement of nighttime clouds.

Crystal structure of Au25(SePh)18 nanoclusters and insights into their electronic, optical and catalytic properties

NASA Astrophysics Data System (ADS)

Song, Yongbo; Zhong, Juan; Yang, Sha; Wang, Shuxin; Cao, Tiantian; Zhang, Jun; Li, Peng; Hu, Daqiao; Pei, Yong; Zhu, Manzhou

2014-10-01

The crystal structure of selenolate-capped Au25(SePh)18- nanoclusters has been unambiguously determined for the first time, and provides a solid basis for a deeper understanding of the structure-property relationships. The selenolate-capped Au25 cluster shows noticeable differences from the previously reported Au25(SCH2CH2Ph)18- counterpart, albeit both share the icosahedral Au13 core and semi-ring Au2(SeR)3 or Au2(SR)3 motifs. Distinct differences in the electronic structure and optical, catalytic and electrochemical properties are revealed by the coupling experiments with density functional theory (TD-DFT) calculations. Overall, the successful determination of the Au25(SePh)18- structure removes any ambiguity about its structure, and comparison with the thiolated Au25 counterpart helps us to further understand how the ligands affect the properties of the nanocluster.The crystal structure of selenolate-capped Au25(SePh)18- nanoclusters has been unambiguously determined for the first time, and provides a solid basis for a deeper understanding of the structure-property relationships. The selenolate-capped Au25 cluster shows noticeable differences from the previously reported Au25(SCH2CH2Ph)18- counterpart, albeit both share the icosahedral Au13 core and semi-ring Au2(SeR)3 or Au2(SR)3 motifs. Distinct differences in the electronic structure and optical, catalytic and electrochemical properties are revealed by the coupling experiments with density functional theory (TD-DFT) calculations. Overall, the successful determination of the Au25(SePh)18- structure removes any ambiguity about its structure, and comparison with the thiolated Au25 counterpart helps us to further understand how the ligands affect the properties of the nanocluster. Electronic supplementary information (ESI) available. See DOI: 10.1039/c4nr04631e

Using Journals to Enhance Learning in Business Classes

ERIC Educational Resources Information Center

Hocking, Deborah E.

2010-01-01

This study investigates the process of using journals that incorporated holistic approaches (cognitive, affective, spiritual, multiple intelligences, and inclusive education) to infuse passion, engage students in deeper reflection, and foster higher level personal skills reflected in the American Institute of Certified Public Accountants' (AICPA)…

Solubility from the Femtoscale to the Macroscale

ERIC Educational Resources Information Center

Pollock, David W.; Truong, Giovanna T.; Bonjour, Jessica L.; Frost, John A.

2018-01-01

Solubility is frequently introduced at the high school and introductory college levels through the symbolic domain using net ionic equations and solubility product constants. Students may become proficient with spectator ion cancellation and skilled with algorithmic mathematical applications of solubility without obtaining a deeper understanding…

A Model of Students' Combinatorial Thinking

ERIC Educational Resources Information Center

Lockwood, Elise

2013-01-01

Combinatorial topics have become increasingly prevalent in K-12 and undergraduate curricula, yet research on combinatorics education indicates that students face difficulties when solving counting problems. The research community has not yet addressed students' ways of thinking at a level that facilitates deeper understanding of how students…

Unexpected hydrologic perturbation in an abandoned underground coal mine: Response to surface reclamation?

USGS Publications Warehouse

Harper, D.; Olyphant, G.A.; Hartke, E.J.

1990-01-01

A reclamation project at the abandoned Blackhawk Mine site near Terre Haute, Indiana, lasted about four months and involved the burial of coarse mine refuse in shallow (less than 9 m) pits excavated into loess and till in an area of about 16 ha. An abandoned flooded underground coal mine underlies the reclamation site at a depth of about 38 m; the total area underlain by the mine is about 10 km2. The potentiometric levels associated with the mine indicate a significant (2.7 m) and prolonged perturbation of the deeper confined groundwater system; 14 months after completing reclamation, the levels began to rise linearly (at an average rate of 0.85 cm/d) for 11 months, then fell exponentially for 25 months, and are now nearly stable. Prominent subsidence features exist near the reclamation site. Subsidence-related fractures were observed in cores from the site, and such fractures may have provided a connection between the shallower and deeper groundwater systems. ?? 1990 Springer-Verlag New York Inc.

Providing Opportunities for Deeper Learning: Findings from the Study of Deeper Learning

ERIC Educational Resources Information Center

Bitter, Catherine; O'Day, Jennifer

2014-01-01

The "Study of Deeper Learning: Opportunities and Outcomes," funded by the William and Flora Hewlett Foundation, is a "proof-of-concept" study to determine whether students attending high schools with a mature and at least moderately well-implemented approach to promoting "deeper learning" experience greater deeper…

Suggestions to Gain Deeper Understanding of Magnetic Fields in Astrophysics Classrooms

NASA Astrophysics Data System (ADS)

Woolsey, Lauren N.

2016-01-01

I present two tools that could be used in an undergraduate or graduate classroom to aid in developing intuition of magnetic fields, how they are measured, and how they affect large scale phenomena like the solar wind. The first tool is a Mathematica widget I developed that simulates observations of magnetic field in the Interstellar Medium (ISM) using the weak Zeeman effect. Woolsey (2015, JAESE) discusses the relevant background information about what structures in the ISM produce a strong enough effect and which molecules are used to make the measurement and why. This widget could be used in an entry level astronomy course as a way to show how astronomers actually make certain types of measurements and allow students to practice inquiry-based learning to understand how different aspects of the ISM environment strengthen or weaken the observed signal. The second tool is a Python model of the solar wind, The Efficient Modified Parker Equation Solving Tool (TEMPEST), that is publicly available on GitHub (https://github.com/lnwoolsey/tempest). I discuss possible short-term projects or investigations that could be done using the programs in the TEMPEST library that are suitable for upper-level undergraduates or in graduate level coursework (Woolsey, 2015, JRAEO).

Cognitive Maps and the Structure of Observed Learning Outcome Assessment of Physiotherapy Students' Ethical Reasoning Knowledge

ERIC Educational Resources Information Center

Jones, Mark; van Kessel, Gisela; Swisher, Laura; Beckstead, Jason; Edwards, Ian

2014-01-01

Assessment of student learning in complex areas is challenging, particularly when there is interest in students' deeper understanding and connectivity of concepts. Assessment of ethics learning has been limited by lack of consensus regarding what is effective and an overfocus on quantification at the expense of clinical or ethical relevance.…

Tangible Models and Haptic Representations Aid Learning of Molecular Biology Concepts

ERIC Educational Resources Information Center

Johannes, Kristen; Powers, Jacklyn; Couper, Lisa; Silberglitt, Matt; Davenport, Jodi

2016-01-01

Can novel 3D models help students develop a deeper understanding of core concepts in molecular biology? We adapted 3D molecular models, developed by scientists, for use in high school science classrooms. The models accurately represent the structural and functional properties of complex DNA and Virus molecules, and provide visual and haptic…

Global governance approaches to addressing illegal logging: uptake and lessons learnt

Treesearch

B. Cashore; K. McGinley; S. Leipold; P.O. Cerutti; G. Bueno; S. et al. Carodenuto

2016-01-01

This report presents the results of the fifth global scientific assessment undertaken by the GFEP initiative. The report set out to gain deeper understanding of the meaning of illegal logging and related timber trade, its scale, drivers and consequences. It provides a structured synthesis of available scientific and expert knowledge on illegal logging and associated...

Cut-it-out technique for ocular fish-hook injury.

PubMed

Ahmad, Syed Shoeb; Seng, Chiang Wai; Ghani, Shuaibah Abdul; Lee, Jane F

2013-10-01

An 11-year-old boy was involved in an injury with a fish-hook to his eye. The hook had impaled itself to the cornea and deeper structures. There was associated corneal edema and hyphema, making visualization difficult. In this case, we performed the unusual "cut-it-out" technique to remove the hook from the eye.

The Peace Corps and Higher Education: Finally the Envisioned Partnership?

ERIC Educational Resources Information Center

Quigley, Kevin F. F.

2013-01-01

A number of structural and contextual changes underway suggests that now that the Peace Corps has begun its second half-century, it may be the opportune time for a broader and deeper strategic partnership with higher education along the lines that the Peace Corps founders' envisioned. That partnership would involve higher education playing an…

Exploring Children's Thinking with and about Numbers from a Resources-Based Approach

ERIC Educational Resources Information Center

Scheuer, Nora; Santamaria, Flavia Irene; Echenique, Mónica Haydée

2017-01-01

The aim of this study is to achieve a deeper understanding of the repertoire of cognitive resources children can display in the process of learning numbers. Forty-two children attending Age 4 Kindergarten Class or Year-One in Argentina were individually interviewed, based on a semi-structured script requiring them to represent definite and…

Echelon approach to areas of concern in synoptic regional monitoring

USGS Publications Warehouse

Myers, Wayne; Patil, Ganapati P.; Joly, Kyle

1997-01-01

Echelons provide an objective approach to prospecting for areas of potential concern in synoptic regional monitoring of a surface variable. Echelons can be regarded informally as stacked hill forms. The strategy is to identify regions of the surface which are elevated relative to surroundings (Relative ELEVATIONS or RELEVATIONS). These are areas which would continue to expand as islands with receding (virtual) floodwaters. Levels where islands would merge are critical elevations which delimit echelons in the vertical dimension. Families of echelons consist of surface sectors constituting separate islands for deeper waters that merge as water level declines. Pits which would hold water are disregarded in such a progression, but a complementary analysis of pits is obtained using the surface as a virtual mould to cast a counter-surface (bathymetric analysis). An echelon tree is a family tree of echelons with peaks as terminals and the lowest level as root. An echelon tree thus provides a dendrogram representation of surface topology which enables graph theoretic analysis and comparison of surface structures. Echelon top view maps show echelon cover sectors on the base plane. An echelon table summarizes characteristics of echelons as instances or cases of hill form surface structure. Determination of echelons requires only ordinal strength for the surface variable, and is thus appropriate for environmental indices as well as measurements. Since echelons are inherent in a surface rather than perceptual, they provide a basis for computer-intelligent understanding of surfaces. Echelons are given for broad-scale mammalian species richness in Pennsylvania.

Slices of Jupiter's Great Red Spot

NASA Image and Video Library

2017-12-11

This figure shows data from the six channels of the microwave radiometer (MWR) instrument onboard NASA's Juno spacecraft. The data were collected in the mission's sixth science orbit (referred to as "perijove 7"), during which the spacecraft passed over Jupiter's Great Red Spot. The top layer in the figure is a visible light image from the mission's JunoCam instrument, provided for context. The MWR instrument enables Juno to see deeper into Jupiter than any previous spacecraft or Earth-based observations. Each MWR channel peers progressively deeper below the visible cloud tops. Channel 1 is sensitive to longer microwave wavelengths; each of the other channels is sensitive to progressively shorter wavelengths. The large-scale structure of the Great Red Spot is visible in the data as deep into Jupiter as MWR can observe. https://photojournal.jpl.nasa.gov/catalog/PIA22177

DSSR-enhanced visualization of nucleic acid structures in Jmol.

PubMed

Hanson, Robert M; Lu, Xiang-Jun

2017-07-03

Sophisticated and interactive visualizations are essential for making sense of the intricate 3D structures of macromolecules. For proteins, secondary structural components are routinely featured in molecular graphics visualizations. However, the field of RNA structural bioinformatics is still lagging behind; for example, current molecular graphics tools lack built-in support even for base pairs, double helices, or hairpin loops. DSSR (Dissecting the Spatial Structure of RNA) is an integrated and automated command-line tool for the analysis and annotation of RNA tertiary structures. It calculates a comprehensive and unique set of features for characterizing RNA, as well as DNA structures. Jmol is a widely used, open-source Java viewer for 3D structures, with a powerful scripting language. JSmol, its reincarnation based on native JavaScript, has a predominant position in the post Java-applet era for web-based visualization of molecular structures. The DSSR-Jmol integration presented here makes salient features of DSSR readily accessible, either via the Java-based Jmol application itself, or its HTML5-based equivalent, JSmol. The DSSR web service accepts 3D coordinate files (in mmCIF or PDB format) initiated from a Jmol or JSmol session and returns DSSR-derived structural features in JSON format. This seamless combination of DSSR and Jmol/JSmol brings the molecular graphics of 3D RNA structures to a similar level as that for proteins, and enables a much deeper analysis of structural characteristics. It fills a gap in RNA structural bioinformatics, and is freely accessible (via the Jmol application or the JSmol-based website http://jmol.x3dna.org). © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research.

What can we learn about impact mechanics from large craters on Venus?

NASA Technical Reports Server (NTRS)

Mckinnon, William B.; Alexopoulos, J. S.

1992-01-01

More than 50 unequivocal peak-ring craters and multiringed impact basins have been identified on Venus from Earth-based Arecibo, Venera 15/16, and Magellan radar images. These ringed craters are relatively pristine, and so serve as an important new dataset that will further understanding of the structural and rheological properties of the venusian surface and of impact mechanics in general. They are also the most direct analogues for craters formed on the Earth in Phanerozoic time. Finite-element simulations of basin collapse and ring formation were undertaken in collaboration with V. J. Hillgren (University of Arizona). These calculations used an axisymmetric version of the viscoelastic finite element code TECTON, modeled structures on the scale of Klenova or Meitner, and demonstrated two major points. First, viscous flow and ring formation are possible on the timescale of crater collapse for the sizes of multiringed basins seen on Venus and heat flows appropriate to the plant. Second, an elastic lithosphere overlying a Newtonian viscous asthenosphere results mainly in uplift beneath the crater. Inward asthenospheric flow mainly occurs at deeper levels. Lithospheric response is dominantly vertical and flexural. Tensional stress maxima occur and ring formation by normal faulting is predicted in some cases, but these predicted rings occur too far out to explain observed ring spacings on Venus (or on the Moon). Overall, these estimates and models suggest that multiringed basin formation is indeed possible at the scales observed on Venus. Furthermore, due to the strong inverse dependence of solid-state viscosity on stress, the absence of Cordilleran-style ring faulting in craters smaller than Meitner or Klenova makes sense. The apparent increase in viscosity of shock-fluidized rock with crater diameter, greater interior temperatures accessed by larger, deeper craters, and decreased non-Newtonian viscosity associated with larger craters may conspire to make the transition with diameter from peak-ring crater to Orientale-type multiringed basin rather abrupt.

Feasibility of imaging evoked activity throughout the rat brain using electrical impedance tomography.

PubMed

Faulkner, Mayo; Hannan, Sana; Aristovich, Kirill; Avery, James; Holder, David

2018-05-10

Electrical Impedance Tomography (EIT) is an emerging technique which has been used to image evoked activity during whisker displacement in the cortex of an anaesthetised rat with a spatiotemporal resolution of 200 μm and 2 ms. The aim of this work was to extend EIT to image not only from the cortex but also from deeper structures active in somatosensory processing, specifically the ventral posterolateral (VPL) nucleus of the thalamus. The direct response in the cortex and VPL following 2 Hz forepaw stimulation were quantified using a 57-channel epicortical electrode array and a 16-channel depth electrode. Impedance changes of -0.16 ± 0.08% at 12.9 ± 1.4 ms and -0.41 ± 0.14% at 8.8±1.9 ms were recorded from the cortex and VPL respectively. For imaging purposes, two 57-channel epicortical electrode arrays were used with one placed on each hemisphere of the rat brain. Despite using parameters optimised toward measuring thalamic activity and undertaking extensive averaging, reconstructed activity was constrained to the cortical somatosensory forepaw region and no significant activity at a depth greater than 1.6 mm below the surface of the cortex could be reconstructed. An evaluation of the depth sensitivity of EIT was investigated in simulations using estimates of the conductivity change and noise levels derived from experiments. These indicate that EIT imaging with epicortical electrodes is limited to activity occurring 2.5 mm below the surface of the cortex. This depth includes the hippocampus and so EIT has the potential to image activity, such as epilepsy, originating from this structure. To image deeper activity, however, alternative methods such as the additional implementation of depth electrodes will be required to gain the necessary depth resolution. Copyright © 2018 The Authors. Published by Elsevier Inc. All rights reserved.

Understanding healthcare practices in superdiverse neighbourhoods and developing the concept of welfare bricolage: Protocol of a cross-national mixed-methods study.

PubMed

Phillimore, Jenny; Bradby, Hannah; Knecht, Michi; Padilla, Beatriz; Brand, Tilman; Cheung, Sin Yi; Pemberton, Simon; Zeeb, Hajo

2015-06-28

Diversity in Europe has both increased and become more complex posing challenges to both national and local welfare state regimes. Evidence indicates specific barriers for migrant, faith and minority ethnic groups when accessing healthcare. However, previous studies of health in diverse cities in European countries have mainly adopted an ethno-national focus. Taking into account the new complexity of diversity within cities, a deeper and multi-faceted understanding of everyday health practices in superdiverse contexts is needed to support appropriate healthcare provision. This protocol describes a mixed method study investigating how residents in superdiverse neighbourhoods access healthcare. The study will include participant observation and qualitative interviewing as well as a standardised health survey and will be carried out in eight superdiverse neighbourhoods - with varying deprivations levels and trajectories of change - in four European countries (Germany, Portugal, Sweden and UK). In each neighbourhood, trained polylingual community researchers together with university researchers will map formal and informal provision and infrastructures supportive to health and healthcare. In-depth interviews with residents and healthcare providers in each country will investigate local health-supportive practices. Thematic analysis will be used to identify different types of help-seeking behaviours and support structures across neighbourhoods and countries. Using categories identified from analyses of interview material, a health survey will be set up investigating determinants of access to healthcare. Complex models, such as structural equation modelling, will be applied to analyse commonalities and differences between population groups, neighbourhoods and countries. This study offers the potential to contribute to a deeper understanding of how residents in superdiverse neighbourhoods deal with health and healthcare in everyday practices. The findings will inform governmental authorities, formal and informal healthcare providers how to further refine health services and how to achieve equitable access in diverse population groups.

Habitat Specialization in Tropical Continental Shelf Demersal Fish Assemblages

PubMed Central

Fitzpatrick, Ben M.; Harvey, Euan S.; Heyward, Andrew J.; Twiggs, Emily J.; Colquhoun, Jamie

2012-01-01

The implications of shallow water impacts such as fishing and climate change on fish assemblages are generally considered in isolation from the distribution and abundance of these fish assemblages in adjacent deeper waters. We investigate the abundance and length of demersal fish assemblages across a section of tropical continental shelf at Ningaloo Reef, Western Australia, to identify fish and fish habitat relationships across steep gradients in depth and in different benthic habitat types. The assemblage composition of demersal fish were assessed from baited remote underwater stereo-video samples (n = 304) collected from 16 depth and habitat combinations. Samples were collected across a depth range poorly represented in the literature from the fringing reef lagoon (1–10 m depth), down the fore reef slope to the reef base (10–30 m depth) then across the adjacent continental shelf (30–110 m depth). Multivariate analyses showed that there were distinctive fish assemblages and different sized fish were associated with each habitat/depth category. Species richness, MaxN and diversity declined with depth, while average length and trophic level increased. The assemblage structure, diversity, size and trophic structure of demersal fishes changes from shallow inshore habitats to deeper water habitats. More habitat specialists (unique species per habitat/depth category) were associated with the reef slope and reef base than other habitats, but offshore sponge-dominated habitats and inshore coral-dominated reef also supported unique species. This suggests that marine protected areas in shallow coral-dominated reef habitats may not adequately protect those species whose depth distribution extends beyond shallow habitats, or other significant elements of demersal fish biodiversity. The ontogenetic habitat partitioning which is characteristic of many species, suggests that to maintain entire species life histories it is necessary to protect corridors of connected habitats through which fish can migrate. PMID:22761852

On the recovery of the local group motion from galaxy redshift surveys

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nusser, Adi; Davis, Marc; Branchini, Enzo, E-mail: adi@physics.technion.ac.il, E-mail: mdavis@berkeley.edu, E-mail: branchin@fis.uniroma3.it

2014-06-20

There is an ∼150 km s{sup –1} discrepancy between the measured motion of the Local Group (LG) of galaxies with respect to the cosmic microwave background and the linear theory prediction based on the gravitational force field of the large-scale structure in full-sky redshift surveys. We perform a variety of tests which show that the LG motion cannot be recovered to better than 150-200 km s{sup –1} in amplitude and within ≈10° in direction. The tests rely on catalogs of mock galaxies identified in the Millennium simulation using semi-analytic galaxy formation models. We compare these results to the K{sub s}more » = 11.75 Two-Mass Galaxy Redshift Survey, which provides the deepest and most complete all-sky spatial distribution of galaxies with spectroscopic redshifts available thus far. In our analysis, we use a new concise relation for deriving the LG motion and bulk flow from the true distribution of galaxies in redshift space. Our results show that the main source of uncertainty is the small effective depth of surveys like the Two-Mass Redshift Survey (2MRS), which prevents a proper sampling of the large-scale structure beyond ∼100 h {sup –1} Mpc. Deeper redshift surveys are needed to reach the 'convergence scale' of ≈250 h {sup –1} Mpc in a ΛCDM universe. Deeper surveys would also mitigate the impact of the 'Kaiser rocket' which, in a survey like 2MRS, remains a significant source of uncertainty. Thanks to the quiet and moderate density environment of the LG, purely dynamical uncertainties of the linear predictions are subdominant at the level of ∼90 km s{sup –1}. Finally, we show that deviations from linear galaxy biasing and shot noise errors provide a minor contribution to the total error budget.« less

Radioisotope tracer approach for understanding the impacts of global change-induced pedoturbation on soil C dynamics

NASA Astrophysics Data System (ADS)

Gonzalez-Meler, M. A.; Sturchio, N. C.; Sanchez-de Leon, Y.; Blanc-Betes, E.; Taneva, L.; Poghosyan, A.; Norby, R. J.; Filley, T. R.; Guilderson, T. P.; Welker, J. M.

2010-12-01

Biogeochemical carbon-cycle feedbacks to climate are apparent but uncertain, primarily because of gaps in mechanistic understanding on the ecosystem processes that drive carbon cycling and storage in terrestrial ecosystems, particularly in soils. Recent findings are increasingly recognizing the interaction between soil biota and the soil physical environment. Soil carbon turnover is partly determined by burial of organic matter and its physical and chemical protection. These factors are potentially affected by changes in climate (freezing-thawing or wet-drying cycles) or ecosystem structure including biological invasions. A major impediment to understanding dynamics of soil C in terrestrial systems is our inability to measure soil physical processes such as soil mixing rates or turnover of soil structures, including aggregates. Here we present a multiple radioisotope tracer approach (naturally occurring and man-made) to measure soil mixing rates in response to global change. We will present evidence of soil mixing rate changes in a temperate forest exposed to increased levels of atmospheric CO2 and in a tundra ecosystem exposed to increased thermal insulation. In both cases, radioisotope tracers proved to be an effective way to measure effects of global change on pedoturbation. Results also provided insights into the specific mechanisms involved in the responses. Elevated CO2 resulted in deeper soil mixing cells (increased by about 5cm on average) when compared to control soils as a consequence of changes in biota (increased root growth, higher earthworm density). In the tundra, soil warming induced higher rates of cryoturbation, resulting in what appears to be a net uplift of organic matter to the surface thereby exposing deeper C to decomposers. In both cases, global change factors affected the vertical distribution of C and changed the amount of bulk soil actively involved in soil processes. As a consequence, comparisons of C budgets to a given soil depth in response to global change factors may be misleading if they do not account for the depth change in the soil mixing cells.

Understanding of anesthesia machine function is enhanced with a transparent reality simulation.

PubMed

Fischler, Ira S; Kaschub, Cynthia E; Lizdas, David E; Lampotang, Samsun

2008-01-01

Photorealistic simulations may provide efficient transfer of certain skills to the real system, but by being opaque may fail to encourage deeper learning of the structure and function of the system. Schematic simulations that are more abstract, with less visual fidelity but make system structure and function transparent, may enhance deeper learning and optimize retention and transfer of learning. We compared learning effectiveness of these 2 modes of externalizing the output of a common simulation engine (the Virtual Anesthesia Machine, VAM) that models machine function and dynamics and responds in real time to user interventions such as changes in gas flow or ventilation. Undergraduate students (n = 39) and medical students (n = 35) were given a single, 1-hour guided learning session with either a Transparent or an Opaque version of the VAM simulation. The following day, the learners' knowledge of machine components, function, and dynamics was tested. The Transparent-VAM groups scored higher than the Opaque-VAM groups on a set of multiple-choice questions concerning conceptual knowledge about anesthesia machines (P = 0.009), provided better and more complete explanations of component function (P = 0.003), and were more accurate in remembering and inferring cause-and-effect dynamics of the machine and relations among components (P = 0.003). Although the medical students outperformed undergraduates on all measures, a similar pattern of benefits for the Transparent VAM was observed for these 2 groups. Schematic simulations that transparently allow learners to visualize, and explore, underlying system dynamics and relations among components may provide a more effective mental model for certain systems. This may lead to a deeper understanding of how the system works, and therefore, we believe, how to detect and respond to potentially adverse situations.

A predictive biophysical model of translational coupling to coordinate and control protein expression in bacterial operons

PubMed Central

Tian, Tian; Salis, Howard M.

2015-01-01

Natural and engineered genetic systems require the coordinated expression of proteins. In bacteria, translational coupling provides a genetically encoded mechanism to control expression level ratios within multi-cistronic operons. We have developed a sequence-to-function biophysical model of translational coupling to predict expression level ratios in natural operons and to design synthetic operons with desired expression level ratios. To quantitatively measure ribosome re-initiation rates, we designed and characterized 22 bi-cistronic operon variants with systematically modified intergenic distances and upstream translation rates. We then derived a thermodynamic free energy model to calculate de novo initiation rates as a result of ribosome-assisted unfolding of intergenic RNA structures. The complete biophysical model has only five free parameters, but was able to accurately predict downstream translation rates for 120 synthetic bi-cistronic and tri-cistronic operons with rationally designed intergenic regions and systematically increased upstream translation rates. The biophysical model also accurately predicted the translation rates of the nine protein atp operon, compared to ribosome profiling measurements. Altogether, the biophysical model quantitatively predicts how translational coupling controls protein expression levels in synthetic and natural bacterial operons, providing a deeper understanding of an important post-transcriptional regulatory mechanism and offering the ability to rationally engineer operons with desired behaviors. PMID:26117546

Ullmann-like reactions for the synthesis of complex two-dimensional materials

NASA Astrophysics Data System (ADS)

Quardokus, Rebecca C.; Tewary, V. K.; DelRio, Frank W.

2016-11-01

Engineering two-dimensional materials through surface-confined synthetic techniques is a promising avenue for designing new materials with tailored properties. Developing and understanding reaction mechanisms for surface-confined synthesis of two-dimensional materials requires atomic-level characterization and chemical analysis. Beggan et al (2015 Nanotechnology 26 365602) used scanning tunneling microscopy and x-ray photoelectron spectroscopy to elucidate the formation mechanism of surface-confined Ullmann-like coupling of thiophene substituted porphyrins on Ag(111). Upon surface deposition, bromine is dissociated and the porphyrins couple with surface adatoms to create linear strands and hexagonally packed molecules. Annealing the sample results in covalently-bonded networks of thienylporphyrin derivatives. A deeper understanding of surface-confined Ullmann-like coupling has the potential to lead to precision-engineered nano-structures through synthetic techniques. Contribution of the National Institute of Standards and Technology, not subject to copyright in the United States of America.

Influence of in doping in GaN barriers on luminescence properties of InGaN/GaN multiple quantum well LEDs

NASA Astrophysics Data System (ADS)

Wang, Xiaowei; Yang, Jing; Zhao, Degang; Jiang, Desheng; Liu, Zongshun; Liu, Wei; Liang, Feng; Liu, Shuangtao; Xing, Yao; Wang, Wenjie; Li, Mo

2018-02-01

Room-temperature photoluminescence (RT PL) spectra of InGaN/GaN multiple quantum well (MQW) structures grown by metalorganic chemical vapor deposition (MOCVD) was investigated. It is found that with increasing In content in GaN barriers, the FWHM and emission intensity decreases, and the emission wavelength is first red shift and then blue shift. The shrinkage of FWHM and emission wavelength blue shift can be attributed to the reduction of piezoelectric field, and the lower height of potential barrier will make carrier confinement weaker and ground state level lower, which resulting in emission intensity decreasing and wavelength red shift. In addition, doping the barrier with In will induce more inhomogeneous and deeper localized states in InGaN QWs, which also contribute to a red shift of PL emission wavelength.

Invariance property of wave scattering through disordered media

PubMed Central

Pierrat, Romain; Ambichl, Philipp; Gigan, Sylvain; Haber, Alexander; Carminati, Rémi; Rotter, Stefan

2014-01-01

A fundamental insight in the theory of diffusive random walks is that the mean length of trajectories traversing a finite open system is independent of the details of the diffusion process. Instead, the mean trajectory length depends only on the system's boundary geometry and is thus unaffected by the value of the mean free path. Here we show that this result is rooted on a much deeper level than that of a random walk, which allows us to extend the reach of this universal invariance property beyond the diffusion approximation. Specifically, we demonstrate that an equivalent invariance relation also holds for the scattering of waves in resonant structures as well as in ballistic, chaotic or in Anderson localized systems. Our work unifies a number of specific observations made in quite diverse fields of science ranging from the movement of ants to nuclear scattering theory. Potential experimental realizations using light fields in disordered media are discussed. PMID:25425671

Shear wave velocity variation across the Taupo Volcanic Zone, New Zealand, from receiver function inversion

USGS Publications Warehouse

Bannister, S.; Bryan, C.J.; Bibby, H.M.

2004-01-01

The Taupo Volcanic Zone (TVZ), New Zealand is a region characterized by very high magma eruption rates and extremely high heat flow, which is manifest in high-temperature geothermal waters. The shear wave velocity structure across the region is inferred using non-linear inversion of receiver functions, which were derived from teleseismic earthquake data. Results from the non-linear inversion, and from forward synthetic modelling, indicate low S velocities at ???6- 16 km depth near the Rotorua and Reporoa calderas. We infer these low-velocity layers to represent the presence of high-level bodies of partial melt associated with the volcanism. Receiver functions at other stations are complicated by reverberations associated with near-surface sedimentary layers. The receiver function data also indicate that the Moho lies between 25 and 30 km, deeper than the 15 ?? 2 km depth previously inferred for the crust-mantle boundary beneath the TVZ. ?? 2004 RAS.

The Evolutionary Ecology of Plant Disease: A Phylogenetic Perspective.

PubMed

Gilbert, Gregory S; Parker, Ingrid M

2016-08-04

An explicit phylogenetic perspective provides useful tools for phytopathology and plant disease ecology because the traits of both plants and microbes are shaped by their evolutionary histories. We present brief primers on phylogenetic signal and the analytical tools of phylogenetic ecology. We review the literature and find abundant evidence of phylogenetic signal in pathogens and plants for most traits involved in disease interactions. Plant nonhost resistance mechanisms and pathogen housekeeping functions are conserved at deeper phylogenetic levels, whereas molecular traits associated with rapid coevolutionary dynamics are more labile at branch tips. Horizontal gene transfer disrupts the phylogenetic signal for some microbial traits. Emergent traits, such as host range and disease severity, show clear phylogenetic signals. Therefore pathogen spread and disease impact are influenced by the phylogenetic structure of host assemblages. Phylogenetically rare species escape disease pressure. Phylogenetic tools could be used to develop predictive tools for phytosanitary risk analysis and reduce disease pressure in multispecies cropping systems.

Depositional environment of the Onverwacht sedimentary rocks Barberton greenstone belt, South Africa

NASA Astrophysics Data System (ADS)

Paris, I. A.

The Onverwacht Group is the basal part of the ca 3.5 Ga succession forming the Barberton greenstone belt. It comprises a volcanic pile overlain by a thin layer of volcaniclastic sediments which, due to silicification, are extremely well preserved. There has been a controversy as to how and in what environment these sediments were formed, different sets of data being presented to reach opposite conclusions. The Onverwacht Group has been extensively repeated tectonically and here for the first time, sediments from different structural levels are studied together. Three separate facies have been recognised, a distal and proximal turbidite facies and a subaerial facies. Deposition of Onverwacht Group sedimentary rocks occurred in an oceanic basin characterised by the presence of emergent volcanic islands. After eruption, material was deposited both subaerially and in a shallow submarine environment on the volcanic slopes and, as a result of pyroclastic flow, in the deeper parts of the basin.

Visualising reacting single atoms under controlled conditions: Advances in atomic resolution in situ Environmental (Scanning) Transmission Electron Microscopy (E(S)TEM)

NASA Astrophysics Data System (ADS)

Boyes, Edward D.; Gai, Pratibha L.

2014-02-01

Advances in atomic resolution Environmental (Scanning) Transmission Electron Microscopy (E(S)TEM) for probing gas-solid catalyst reactions in situ at the atomic level under controlled reaction conditions of gas environment and temperature are described. The recent development of the ESTEM extends the capability of the ETEM by providing the direct visualisation of single atoms and the atomic structure of selected solid state heterogeneous catalysts in their working states in real-time. Atomic resolution E(S)TEM provides a deeper understanding of the dynamic atomic processes at the surface of solids and their mechanisms of operation. The benefits of atomic resolution-E(S)TEM to science and technology include new knowledge leading to improved technological processes with substantial economic benefits, improved healthcare, reductions in energy needs and the management of environmental waste generation. xml:lang="fr"

Psychometrics: An Introduction

ERIC Educational Resources Information Center

Furr, Mike; Bacharach, Verne R.

2007-01-01

The authors center their presentation of material around a conceptual understanding of psychometric issues, such as validity and reliability, and on purpose rather than procedure, the "why" rather than the "how to." Their goal is to introduce psychometric principles at a level that is deeper and more focused than found in introductory…

Authentic Education: Visualising Education in a Deeper Perspective

ERIC Educational Resources Information Center

Watagodakumbura, Chandana

2013-01-01

Authentic education is presented in this paper from a multidisciplinary perspective; it is viewed and discussed mainly from the perspectives of psychology, pedagogy, neuroscience and machine learning. It addresses the individual psychological and neurological differences and guide individuals to reach higher levels of human developments.…

Teacher Self-Knowledge: The Deeper Learning

ERIC Educational Resources Information Center

McIntosh, Peggy

2015-01-01

The National Seeking Educational Equity and Diversity (SEED) Project on Inclusive Curriculum is the nation's largest peer-led leadership development project. It engages public and private school teachers, college faculty, parents, and community leaders from all subject areas, grade levels, and geographic locations to create gender fair,…

The Full Spectrum of Community Support

ERIC Educational Resources Information Center

Pawlowski, Brett; Meeder, Hans K.

2012-01-01

Career and technical education (CTE) programs generally attract a deeper level of involvement with the business community, given their shared interest in workforce preparedness. There are significant opportunities to increase the depth and scope of business and community engagement, which can lead to more resources, better operations and improved…

Understanding Summary Statistics and Graphical Techniques to Compare Michael Jordan versus LeBron James

ERIC Educational Resources Information Center

Williams, Immanuel James; Williams, Kelley Kim

2016-01-01

Understanding summary statistics and graphical techniques are building blocks to comprehending concepts beyond basic statistics. It's known that motivated students perform better in school. Using examples that students find engaging allows them to understand the concepts at a deeper level.

Perceptions of prominent neighborhood individuals regarding neighborhood factors and intimate partner violence.

PubMed

Yonas, Michael; Akers, Aletha Y; Burke, Jessica G; Chang, Judy C; Thomas, Alicia L; Thomas, Aletha L; O'Campo, Patricia

2011-04-01

Research addressing the impact of neighborhood factors on intimate partner violence (IPV) often lacks discussion of how and why such factors impact IPV. In order to address this gap, 16 prominent neighborhood individuals (PNI) from 4 low-income urban neighborhoods were asked to share through in-depth interviews their insights and perceptions of IPV as an issue in their neighborhoods, and the relationship between social and structural neighborhood-level factors and IPV. PNIs most often associated IPV with only physical violence. Several did not feel IPV was a significant issue in their neighborhood, confirming a lack of awareness and underreporting of IPV. However, other PNIs were able to speak of the relationship between IPV and neighborhood factors, including lack of opportunities for employment, vacant housing, trash management, lack of community awareness, and social capacity to act to address IPV. Results provide unique insights regarding the mechanisms linking neighborhood factors to IPV outcomes. These results contribute to a deeper understanding of contextual influences upon IPV, the development of tailored quantitative research and to the design of local multi-level public health IPV intervention and prevention efforts.

Contribution to the Study of Regional Magnetization of Satellite Magnetic Measurement: Magsat, Orsted, and Champ (with Gravity Field)

NASA Technical Reports Server (NTRS)

Taylor, Patrick T.

2004-01-01

A discussion of and introduction to satellite-altitude geopotential field studies and their interpretation with emphasis on results from metalliferous regions will be given. The magnetic and gravimetric measurements from satellite altitudes show heterogeneity in deeper parts of the lithosphere. These patterns of magnetic anomalies do not only reveal the largest iron ore deposits such as Kiruna, Sweden, Kursk, Russia, and Banugi, Central African Republic but also linear features indicating structural discontinuities. Changes of magnetic amplitude of these patterns are caused by intersecting transverse fractures localizing magmatism and concentration of metals. In addition satellite altitude data are related to variations in crustal thickness and heat flow. Deep-rooted structural discontinuities, defined by combination of geological and geophysical criteria, with spacing of several hundred kilometers, reveal a quite uniform pattern in the deeper parts of the lithosphere. As these structures provide favorable pathways for the ascent of heat, magmas and ore-forming fluids, their recognition is of crucial importance and can be used in the compilation of a new type of mineral prognosis map. An example from Europe includes a pattern of east west trending structural discontinuities or belts and their junction with the NW-trending Tornqvist-Teisseyre Line. The Upper Silesian-Cracovian Zn-Pb district occurs along one of the latitudinal belts. Leslaw Teper of the University of Silesia has been invited to show the fractures in crystalline basement beneath the sediments hosting the Zn-Pb ores.

Bloom's taxonomy of cognitive learning objectives.

PubMed

Adams, Nancy E

2015-07-01

Information professionals who train or instruct others can use Bloom's taxonomy to write learning objectives that describe the skills and abilities that they desire their learners to master and demonstrate. Bloom's taxonomy differentiates between cognitive skill levels and calls attention to learning objectives that require higher levels of cognitive skills and, therefore, lead to deeper learning and transfer of knowledge and skills to a greater variety of tasks and contexts.

Vulnerability of the Superficial Zone of Immature Articular Cartilage to Compressive Injury

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rolauffs, R.; Muehleman, C; Li, J

The zonal composition and functioning of adult articular cartilage causes depth-dependent responses to compressive injury. In immature cartilage, shear and compressive moduli as well as collagen and sulfated glycosaminoglycan (sGAG) content also vary with depth. However, there is little understanding of the depth-dependent damage caused by injury. Since injury to immature knee joints most often causes articular cartilage lesions, this study was undertaken to characterize the zonal dependence of biomechanical, biochemical, and matrix-associated changes caused by compressive injury. Disks from the superficial and deeper zones of bovine calves were biomechanically characterized. Injury to the disks was achieved by applying amore » final strain of 50% compression at 100%/second, followed by biomechanical recharacterization. Tissue compaction upon injury as well as sGAG density, sGAG loss, and biosynthesis were measured. Collagen fiber orientation and matrix damage were assessed using histology, diffraction-enhanced x-ray imaging, and texture analysis. Injured superficial zone disks showed surface disruption, tissue compaction by 20.3 {+-} 4.3% (mean {+-} SEM), and immediate biomechanical impairment that was revealed by a mean {+-} SEM decrease in dynamic stiffness to 7.1 {+-} 3.3% of the value before injury and equilibrium moduli that were below the level of detection. Tissue areas that appeared intact on histology showed clear textural alterations. Injured deeper zone disks showed collagen crimping but remained undamaged and biomechanically intact. Superficial zone disks did not lose sGAG immediately after injury, but lost 17.8 {+-} 1.4% of sGAG after 48 hours; deeper zone disks lost only 2.8 {+-} 0.3% of sGAG content. Biomechanical impairment was associated primarily with structural damage. The soft superficial zone of immature cartilage is vulnerable to compressive injury, causing superficial matrix disruption, extensive compaction, and textural alteration, which results in immediate loss of biomechanical function. In conjunction with delayed superficial sGAG loss, these changes may predispose the articular surface to further softening and tissue damage, thus increasing the risk of development of secondary osteoarthritis.« less

Vertical stratification of microbial communities in the Red Sea revealed by 16S rDNA pyrosequencing.

PubMed

Qian, Pei-Yuan; Wang, Yong; Lee, On On; Lau, Stanley C K; Yang, Jiangke; Lafi, Feras F; Al-Suwailem, Abdulaziz; Wong, Tim Y H

2011-03-01

The ecosystems of the Red Sea are among the least-explored microbial habitats in the marine environment. In this study, we investigated the microbial communities in the water column overlying the Atlantis II Deep and Discovery Deep in the Red Sea. Taxonomic classification of pyrosequencing reads of the 16S rRNA gene amplicons showed vertical stratification of microbial diversity from the surface water to 1500 m below the surface. Significant differences in both bacterial and archaeal diversity were observed in the upper (20 [corrected] and 50 m) and deeper layers (200 and 1500 m). There were no obvious differences in community structure at the same depth for the two sampling stations. The bacterial community in the upper layer was dominated by Cyanobacteria whereas the deeper layer harbored a large proportion of Proteobacteria. Among Archaea, Euryarchaeota, especially Halobacteriales, were dominant in the upper layer but diminished drastically in the deeper layer where Desulfurococcales belonging to Crenarchaeota became the dominant group. The results of our study indicate that the microbial communities sampled in this study are different from those identified in water column in other parts of the world. The depth-wise compositional variation in the microbial communities is attributable to their adaptations to the various environments in the Red Sea.

Levels of Processing and the Cue-Dependent Nature of Recollection

ERIC Educational Resources Information Center

Mulligan, Neil W.; Picklesimer, Milton

2012-01-01

Dual-process models differentiate between two bases of memory, recollection and familiarity. It is routinely claimed that deeper, semantic encoding enhances recollection relative to shallow, non-semantic encoding, and that recollection is largely a product of semantic, elaborative rehearsal. The present experiments show that this is not always the…

An Emergentist Model for Writing in Mathematics.

ERIC Educational Resources Information Center

Hoh, Pau-San; Kirtland, Joe

In spite of the widespread implementation of Writing Across the Curriculum (WAC), there remains little concrete evidence of the writing-thinking connection. This paper proposes a new research method that tracks students' performance and production at a deeper level of specificity than that in previous investigations of this relationship, e.g., in…

Distance-Mentored Undergraduate Research

ERIC Educational Resources Information Center

Albuja, Analia; Greenlaw, Steven A.

2014-01-01

One strength of liberal arts and sciences colleges is their emphasis on so-called "high-impact practices" (HIPs), which are known to be associated with student success. These practices include first-year seminars, learning communities, and study abroad, among others. What all of these HIPs share is a deeper level of engagement and active…

Collaborative Science Activities and the Social Construction of Understanding of Physical Science Concepts by Pre-service Teachers in Fiji.

ERIC Educational Resources Information Center

Taylor, Neil; Lucas, Keith B.; Watters, James J.

1999-01-01

Finds that collaborative group work among pre-service elementary teachers stimulated increased levels of discussion and fostered deeper conceptual understanding than did traditional instructional methods. Discusses implications for science education in Fiji and similar places. (Contains 37 references.) (Author/WRM)

Blackstone Valley Prep Mayoral Academy: BVP High School

ERIC Educational Resources Information Center

EDUCAUSE, 2015

2015-01-01

This Rhode Island charter high school serves an intentionally diverse population of students from two urban and two suburban communities. The blended learning model is tailored by grade level and emphasizes differentiation, deeper learning in a community, and assessment. The two-page grantee profiles from Next Generation Learning Challenges (NGLC)…

Teaching Using New Technologies and Students Resilience

ERIC Educational Resources Information Center

Onofrei, Smaranda Gabriela

2015-01-01

Under the conditions of a digital age, new technologies undergo various interpretations, approaches and usages. Education reaches new dimensions at all its levels, by adopting new technologies in order to deeper support modern possibilities of learning that define the new generations: a high degree of digital capabilities, the capacity to…

The Lobster Tale: An Exercise in Critical Thinking

ERIC Educational Resources Information Center

Stepanovich, Paul L.

2009-01-01

Professors in management and business are encouraged to incorporate critical thinking as an objective in their courses. "The Lobster Tale" provides an opportunity to engage students in various levels of critical thinking, ranging from a relatively superficial reading to an examination of the deeper, often hidden issues. Using the foundations of…

Growth in Turkish Positive Basic Sciences, 1933-1966.

ERIC Educational Resources Information Center

Ozinonu, A. Kemal

This study collected data on the measurable qualities of Turkish science in terms of high level scientific manpower, scientific productivity, and scientific fertility from 1933 to 1966 and analyzed the data collected with the goal of providing a deeper understanding of the nature of Turkish science. Scientific personnel, including Turkish…

The Prayer-Poem and Jung's Use of Active-Imagination.

ERIC Educational Resources Information Center

Molton, Warren L.

1996-01-01

Develops the concept of the prayer-poem as a method for spiritual search. Relates the process of the prayer-poem to Carl Jung's use of "active imagination" as a way of pushing the poetic image to a deeper level of meaning and usefulness: a window into the psyche (soul). (SR)

Focus on Learning: Reflective Learners & Feedback

ERIC Educational Resources Information Center

Bard, Rose

2014-01-01

Reflecting simply put is the act of thinking about something while seeking a deeper level of understanding. Reflective practice is applying this thinking systematically by making questions, collecting data, and analysing it in order, not to prove something, but to comprehend and act upon reality. It is also an ongoing process that involves…

Project Circuits in a Basic Electric Circuits Course

ERIC Educational Resources Information Center

Becker, James P.; Plumb, Carolyn; Revia, Richard A.

2014-01-01

The use of project circuits (a photoplethysmograph circuit and a simple audio amplifier), introduced in a sophomore-level electric circuits course utilizing active learning and inquiry-based methods, is described. The development of the project circuits was initiated to promote enhanced engagement and deeper understanding of course content among…

An active seismic experiment at Tenerife Island (Canary Island, Spain): Imaging an active volcano edifice

NASA Astrophysics Data System (ADS)

Garcia-Yeguas, A.; Ibañez, J. M.; Rietbrock, A.; Tom-Teidevs, G.

2008-12-01

An active seismic experiment to study the internal structure of Teide Volcano was carried out on Tenerife, a volcanic island in Spain's Canary Islands. The main objective of the TOM-TEIDEVS experiment is to obtain a 3-dimensional structural image of Teide Volcano using seismic tomography and seismic reflection/refraction imaging techniques. At present, knowledge of the deeper structure of Teide and Tenerife is very limited, with proposed structural models mainly based on sparse geophysical and geological data. This multinational experiment which involves institutes from Spain, Italy, the United Kingdom, Ireland, and Mexico will generate a unique high resolution structural image of the active volcano edifice and will further our understanding of volcanic processes.

Imaging an Active Volcano Edifice at Tenerife Island, Spain

NASA Astrophysics Data System (ADS)

Ibáñez, Jesús M.; Rietbrock, Andreas; García-Yeguas, Araceli

2008-08-01

An active seismic experiment to study the internal structure of Teide volcano is being carried out on Tenerife, a volcanic island in Spain's Canary Islands archipelago. The main objective of the Tomography at Teide Volcano Spain (TOM-TEIDEVS) experiment, begun in January 2007, is to obtain a three-dimensional (3-D) structural image of Teide volcano using seismic tomography and seismic reflection/refraction imaging techniques. At present, knowledge of the deeper structure of Teide and Tenerife is very limited, with proposed structural models based mainly on sparse geophysical and geological data. The multinational experiment-involving institutes from Spain, the United Kingdom, Italy, Ireland, and Mexico-will generate a unique high-resolution structural image of the active volcano edifice and will further our understanding of volcanic processes.

A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny

Treesearch

Kasey K. Pham; Andrew L. Hipp; Paul S. Manos; Richard C. Cronn

2017-01-01

Owing to high rates of introgressive hybridization, the plastid genome is poorly suited to fine-scale DNA barcoding and phylogenetic studies of the oak genus (Quercus, Fagaceae). At the tips of the oak plastome phylogeny, recent gene migration and reticulation generally cause topology to reflect geographic structure, while deeper branches reflect...

Experiencias y avatares en la instalación local del programa ATLAS

NASA Astrophysics Data System (ADS)

Merlo, D. C.; Milone, L. A.

In this paper we briefly describe the steps required for installation of AT- LAS code by Robert Kurucz. Subsequently, we summarize its implementa- tion and its comparison with our code MAPCOR, finding agreement on the structures of pressure when we look deeper layers, but some discrepancies in outer layers due to its limitations. FULL TEXT IN SPANISH

Deeper Insights into the Allosteric Modulation of Ionotropic Glutamate Receptors.

PubMed

Regan, Michael C; Furukawa, Hiro

2016-09-21

Two articles in this issue of Neuron (Yelshanskaya et al., 2016; Yi et al., 2016) explore the structural basis of allosteric inhibition in ionotropic glutamate receptors, providing key insights into how iGluRs function in the brain as well as how they might be pharmacologically modulated in neurological disorders and disease. Copyright © 2016. Published by Elsevier Inc.

Diversity of small mammals in the Sierra Nevada: Filtering by natural selection or by anthropogenic activities?

Treesearch

Douglas A. Kelt; Rahel Sollmann; Angela M. White; Susan L. Roberts; Dirk H. Van Vuren

2016-01-01

Both historical and contemporary factors may influence the structure and composition of biotas. Small mammal faunas in the Sierra Nevada of California, United States, are strongly dominated by generalist species; however, whereas 1 recent study argues that this is a product of recent anthropogenic influences, another provides a deeper evolutionary explanation based on...

Exploring the Hidden Structure of Astronomical Images: A "Pixelated" View of Solar System and Deep Space Features!

ERIC Educational Resources Information Center

Ward, R. Bruce; Sienkiewicz, Frank; Sadler, Philip; Antonucci, Paul; Miller, Jaimie

2013-01-01

We describe activities created to help student participants in Project ITEAMS (Innovative Technology-Enabled Astronomy for Middle Schools) develop a deeper understanding of picture elements (pixels), image creation, and analysis of the recorded data. ITEAMS is an out-of-school time (OST) program funded by the National Science Foundation (NSF) with…

Every Child Is an Artist: Arts Education in Milwaukee and Insights from Other Cities

ERIC Educational Resources Information Center

Chapman, Anne; Henken, Rob

2014-01-01

In this report, a follow-up to the June 2013 report: "Community-Led Arts Education Models in the U.S.: Potential Lessons for Milwaukee", the authors use a case study approach to delve deeper into the underlying mechanics and structural factors of four successful models: Boston's BPS Arts Expansion Initiative, Dallas' Big Thought,…

Influence of structures on drainage patterns in the Tushka region, SW Egypt

NASA Astrophysics Data System (ADS)

Robinson, C. A.; El-Kaliouby, H.; Ghoneim, E.

2017-12-01

Remote sensing (radar, thermal and topographic) and geophysical (Vertical Electrical Sounding and Ground Penetrating Radar) data are used to understand areas with enhanced groundwater potential in deeper aquifer settings between 22°0‧-22°56‧N and 30°21-31°20‧E in the Tushka area of southwest Egypt. The premise is that areas with enhanced groundwater accumulations represent the best locations for agricultural development that is underway in this region and that deeper sources groundwater resources are the most sustainable. New fluvial and structural interpretations emphasize that the desert landscape was produced by fluvial action in the past. The correlation of high drainage and fault densities, coincident with gentle slope, guided sites for geophysical investigation that provides information about the aquifer depth and distribution, and the subsurface distribution of faults. Results confirm the presence of subsurface fault plains and fault zones and potential water aquifers at these locations. Surface environments further demonstrated an abundance of shrubs and cultivatable soils. The new approach therefore is a cost effective and noninvasive technique that can be applied throughout the eastern Sahara to assist in resource management decisions and support the planned agricultural expansion.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fischer, F.J.

As the petroleum industry has moved into deeper and deeper water for the recovery of oil and gas, weight-sensitive floating platforms have replaced stationary, bottom-founded structures. The cost penalty for weight or vertical tension supported by floaters such as tension leg platforms (TLPs) is in the range of $10--20/kg. Hence, there is considerable incentive to reduce the weight of equipment or structural members on these platforms and downward forces exerted on these platforms by production and export risers, and mooring lines. Thus, there are numerous opportunities for utilizing light-weight, high-strength composites. The offshore petroleum industry has acknowledged the desirable performancemore » characteristics of composites for some time but only recently has there been some optimism that composites could be cost-effective. For most, if not all perceived applications, advanced composites are not considered to be technically enabling for current water depths of interest, i.e., 600--1,200m. However, in a very real sense, they may be economically enabling. In particular, they may allow marginal prospects to be developed or may expedite field development subject to capital constraints. The paper discusses composite production risers, break-even costs and savings, and riser tensioners.« less

NMDA receptor modulators: an updated patent review (2013-2014).

PubMed

Strong, Katie L; Jing, Yao; Prosser, Anthony R; Traynelis, Stephen F; Liotta, Dennis C

2014-12-01

The NMDA receptor mediates a slow component of excitatory synaptic transmission, and NMDA receptor dysfunction has been implicated in numerous neurological disorders. Thus, interest in developing modulators that are capable of regulating the channel continues to be strong. Recent research has led to the discovery of a number of compounds that hold therapeutic and clinical value. Deeper insight into the NMDA intersubunit interactions and structural motifs gleaned from the recently solved crystal structures of the NMDA receptor should facilitate a deeper understanding of how these compounds modulate the receptor. This article discusses the known pharmacology of NMDA receptors. A discussion of the patent literature since 2012 is also included, with an emphasis on those that claimed new chemical entities as regulators of the NMDA receptor. The number of patents involving novel NMDA receptor modulators suggests a renewed interest in the NMDA receptor as a therapeutic target. Subunit-selective modulators continue to show promise, and the development of new subunit-selective NMDA receptor modulators appears poised for continued growth. Although a modest number of channel blocker patents were published, successful clinical outcomes involving ketamine have led to a resurgent interest in low-affinity channel blockers as therapeutics.

Autonomy support and need satisfaction in prevocational programs on care farms: The self-determination theory perspective.

PubMed

Ellingsen-Dalskau, Lina H; Morken, Margrete; Berget, Bente; Pedersen, Ingeborg

2015-01-01

Mental health problems are leading causes for early and prolonged withdrawal from the workforce. Green work on care farms represents a prevocational training program intended to stimulate return to work for people with mental health problems. Research suggests that care farms may improve mental health, but there is still little knowledge of the subjective perspective of clients in green work programs. To gain a deeper and broader understanding of the individual experiences of people with mental health problems participating in green work on care farms in Norway. A hermeneutic phenomenological research design was applied. Ten semi-structured interviews were conducted. The self-determination theory (SDT) was adapted to gain a deeper understanding of the themes that emerged in the analysis process of the interviews. Five main themes materialize describing participants' experiences within the green work program. The main themes consist of (1) structure and flexibility, (2) understanding and acknowledgement, (3) guidance and positive feedback, (4) nature and animals, and (5) reflections on personal functioning and the future. The main themes identified indicate a high degree of autonomy support and need satisfaction within the care farm context, which according to SDT can facilitate good human functioning, and well-being.

Possible Causes of Double-BSRs on the Hikurangi Margin, New Zealand

NASA Astrophysics Data System (ADS)

Pecher, I. A.; Mountjoy, J. J.; Crutchley, G. J.; Krastel, S.; Koch, S.; Dannowski, A.; Bialas, J.; Henrys, S. A.

2014-12-01

Bottom Simulating Reflections (BSRs) are commonly thought to be caused by free gas at the base of gas hydrate stability (BGHS). BSRs usually occur at the pressure-temperature conditions for the phase boundary of gas hydrate, which depends on gas composition, pore water chemistry, and various other factors. Hence, BSRs should only occur at a single depth level beneath the seafloor. At several locations worldwide however, double and multiple BSRs have been observed. We have recently discovered localized double-BSRs on the Hikurangi Margin east of New Zealand and present first results from studying the possible origin of these double-BSRs. Both BSRs display negative polarity compared to the seafloor ruling out diagenetic origins. The deeper BSR (BSR-2) is found to be anomalously deep, while the shallower BSR (BSR-1) is at similar depths as BSRs regionally. BSR-2 and BSR-1 are clearly separated on seismic lines from east to west, while they converge from north to south. We propose two possible models for formation of these double-BSRs: 1. Uplift leads to depressurization and an upward movement of the BGHS with respect to the seafloor. BSR-1 may have formed at the new BGHS while immobile gas may remain in place at the original level of the BGHS causing BSR-2. 2. Thermogenic gas may leak from a deeper hydrocarbon reservoir. Gas mixes of thermogenic origin are predicted to form hydrate that is more stable than pure methane hydrate, in particular if the mix contains gases that lead to formation of Structure-II hydrate. BSR-2 may form at a level of the BGHS for a more stable gas mix; residual gases may migrate further until they reach the phase boundary for less stable hydrates at BSR-1. We currently slightly favour uplift as cause of the double-BSRs largely because of the smooth topography of BSR-2: Small-scale lateral variations of gas composition should lead to significant BSR topography. More importantly, we note that the process of fractionation of gas during hydrate formation from thermogenic gas mixes in nature is only poorly understood.

Challenging aspects of contemporary cochlear implant electrode array design.

PubMed

Mistrík, Pavel; Jolly, Claude; Sieber, Daniel; Hochmair, Ingeborg

2017-12-01

A design comparison of current perimodiolar and lateral wall electrode arrays of the cochlear implant (CI) is provided. The focus is on functional features such as acoustic frequency coverage and tonotopic mapping, battery consumption and dynamic range. A traumacity of their insertion is also evaluated. Review of up-to-date literature. Perimodiolar electrode arrays are positioned in the basal turn of the cochlea near the modiolus. They are designed to initiate the action potential in the proximity to the neural soma located in spiral ganglion. On the other hand, lateral wall electrode arrays can be inserted deeper inside the cochlea, as they are located along the lateral wall and such insertion trajectory is less traumatic. This class of arrays targets primarily surviving neural peripheral processes. Due to their larger insertion depth, lateral wall arrays can deliver lower acoustic frequencies in manner better corresponding to cochlear tonotopicity. In fact, spiral ganglion sections containing auditory nerve fibres tuned to low acoustic frequencies are located deeper than 1 and half turn inside the cochlea. For this reason, a significant frequency mismatch might be occurring for apical electrodes in perimodiolar arrays, detrimental to speech perception. Tonal languages such as Mandarin might be therefore better treated with lateral wall arrays. On the other hand, closer proximity to target tissue results in lower psychophysical threshold levels for perimodiolar arrays. However, the maximal comfort level is also lower, paradoxically resulting in narrower dynamic range than that of lateral wall arrays. Battery consumption is comparable for both types of arrays. Lateral wall arrays are less likely to cause trauma to cochlear structures. As the current trend in cochlear implantation is the maximal protection of residual acoustic hearing, the lateral wall arrays seem more suitable for hearing preservation CI surgeries. Future development could focus on combining the advantages of both types: perimodiolar location in the basal turn extended to lateral wall location for higher turn locations.

``Phantom'' Modes in Ab Initio Tunneling Calculations: Implications for Theoretical Materials Optimization, Tunneling, and Transport

NASA Astrophysics Data System (ADS)

Barabash, Sergey V.; Pramanik, Dipankar

2015-03-01

Development of low-leakage dielectrics for semiconductor industry, together with many other areas of academic and industrial research, increasingly rely upon ab initio tunneling and transport calculations. Complex band structure (CBS) is a powerful formalism to establish the nature of tunneling modes, providing both a deeper understanding and a guided optimization of materials, with practical applications ranging from screening candidate dielectrics for lowest ``ultimate leakage'' to identifying charge-neutrality levels and Fermi level pinning. We demonstrate that CBS is prone to a particular type of spurious ``phantom'' solution, previously deemed true but irrelevant because of a very fast decay. We demonstrate that (i) in complex materials, phantom modes may exhibit very slow decay (appearing as leading tunneling terms implying qualitative and huge quantitative errors), (ii) the phantom modes are spurious, (iii) unlike the pseudopotential ``ghost'' states, phantoms are an apparently unavoidable artifact of large numerical basis sets, (iv) a presumed increase in computational accuracy increases the number of phantoms, effectively corrupting the CBS results despite the higher accuracy achieved in resolving the true CBS modes and the real band structure, and (v) the phantom modes cannot be easily separated from the true CBS modes. We discuss implications for direct transport calculations. The strategy for dealing with the phantom states is discussed in the context of optimizing high-quality high- κ dielectric materials for decreased tunneling leakage.

Pluton emplacement within an extensional transfer zone during dextral strike-slip faulting: an example from the late Archaean Abitibi Greenstone Belt

NASA Astrophysics Data System (ADS)

Lacroix, S.; Sawyer, E. W.; Chown, E. H.

1998-01-01

The Lake Abitibi area within the late Archaean Abitibi Greenstone Belt exhibits an interlinked plutonic, structural and metamorphic evolution that may characterize segmented strike-slip faults at upper-to-mid-crustal levels. Along the major, southeastward propagating Macamic D2 dextral strike-slip fault, Theological and preexisting D1 structural heterogeneities induced the development of NNW-trending dextral-oblique splays which evolved into an extensional trailing fan and created an extensional, NNW-dipping stepover. Magma flowing upwards from deeper parts of the Macamic Fault spread towards the southeast at upper crustal levels along both the oblique-slip and extensional D2 splays, and built several plutons in a pull-apart domain between 2696 and 2690 Ma. Different emplacement and material transfer mechanisms operated simultaneously in different parts of the system, including fault dilation and wedging, lateral expansion, wall-rock ductile flow and stoping. Transfer of movement between D2 splays occurred under ductile conditions during syn-emplacement, amphibolite-grade metamorphism (500-700 °C). During cooling (< 2690 Ma), narrower brittle-ductile zones of greenschist-grade shearing were concentrated along the pluton-wall rock contacts, but the extensional stepover locked since both normal and reverse movements occurred along NNW-dipping faults. Pluton emplacement, contact metamorphism and propagation of D2 faults appear to have been closely linked during the Superior Province-wide late transpressional event.

Shelf Circulation Induced by an Orographic Wind Jet

NASA Astrophysics Data System (ADS)

Ràfols, Laura; Grifoll, Manel; Jordà, Gabriel; Espino, Manuel; Sairouní, Abdel; Bravo, Manel

2017-10-01

The dynamical response to cross-shelf wind-jet episodes is investigated. The study area is located at the northern margin of the Ebro Shelf, in the Northwestern (NW) Mediterranean Sea, where episodes of strong northwesterly wind occur. In this case, the wind is channeled through the Ebro Valley and intensifies upon reaching the sea, resulting in a wind jet. The wind-jet response in terms of water circulation and vertical density structure is investigated using a numerical model. The numerical outputs agree with water current observations from a high-frequency radar. Additionally, temperature, sea level, and wind measurements are also used for the skill assessment of the model. For the wind-jet episodes, the numerical results show a well-defined two-layer circulation in the cross-shelf direction, with the surface currents in the direction of the wind. This pattern is consistent with sea level set-down due to the wind effect. The comparison of the vertical structure response for different episodes revealed that the increase of stratification leads to an onshore displacement of the transition from inner shelf to mid-shelf. In general, the cross-shelf momentum balance during a wind-jet episode exhibits a balance between the frictional terms and the pressure gradient in shallow waters, shifting to a balance between the Coriolis force and the wind stress terms in deeper waters.

Dependence of Hurricane intensity and structures on vertical resolution and time-step size

NASA Astrophysics Data System (ADS)

Zhang, Da-Lin; Wang, Xiaoxue

2003-09-01

In view of the growing interests in the explicit modeling of clouds and precipitation, the effects of varying vertical resolution and time-step sizes on the 72-h explicit simulation of Hurricane Andrew (1992) are studied using the Pennsylvania State University/National Center for Atmospheric Research (PSU/NCAR) mesoscale model (i.e., MM5) with the finest grid size of 6 km. It is shown that changing vertical resolution and time-step size has significant effects on hurricane intensity and inner-core cloud/precipitation, but little impact on the hurricane track. In general, increasing vertical resolution tends to produce a deeper storm with lower central pressure and stronger three-dimensional winds, and more precipitation. Similar effects, but to a less extent, occur when the time-step size is reduced. It is found that increasing the low-level vertical resolution is more efficient in intensifying a hurricane, whereas changing the upper-level vertical resolution has little impact on the hurricane intensity. Moreover, the use of a thicker surface layer tends to produce higher maximum surface winds. It is concluded that the use of higher vertical resolution, a thin surface layer, and smaller time-step sizes, along with higher horizontal resolution, is desirable to model more realistically the intensity and inner-core structures and evolution of tropical storms as well as the other convectively driven weather systems.

Subcortical surgical anatomy of the lateral frontal region: human white matter dissection and correlations with functional insights provided by intraoperative direct brain stimulation: laboratory investigation.

PubMed

De Benedictis, Alessandro; Sarubbo, Silvio; Duffau, Hugues

2012-12-01

Recent neuroimaging and surgical results support the crucial role of white matter in mediating motor and higher-level processing within the frontal lobe, while suggesting the limited compensatory capacity after damage to subcortical structures. Consequently, an accurate knowledge of the anatomofunctional organization of the pathways running within this region is mandatory for planning safe and effective surgical approaches to different diseases. The aim of this dissection study was to improve the neurosurgeon's awareness of the subcortical anatomofunctional architecture for a lateral approach to the frontal region, to optimize both resection and postoperative outcome. Ten human hemispheres (5 left, 5 right) were dissected according to the Klingler technique. Proceeding lateromedially, the main association and projection tracts as well as the deeper basal structures were identified. The authors describe the anatomy and the relationships among the exposed structures in both a systematic and topographical surgical perspective. Structural results were also correlated to the functional responses obtained during resections of infiltrative frontal tumors guided by direct cortico-subcortical electrostimulation with patients in the awake condition. The eloquent boundaries crucial for a safe frontal lobectomy or an extensive lesionectomy are as follows: 1) the motor cortex; 2) the pyramidal tract and premotor fibers in the posterior and posteromedial part of the surgical field; 3) the inferior frontooccipital fascicle and the superior longitudinal fascicle posterolaterally; and 4) underneath the inferior frontal gyrus, the head of the caudate nucleus, and the tip of the frontal horn of the lateral ventricle in the depth. Optimization of results following brain surgery, especially within the frontal lobe, requires a perfect knowledge of functional anatomy, not only at the cortical level but also with regard to subcortical white matter connectivity.

Industry shows faith in deep Anadarko

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wroblewski, E.F.

1973-10-08

The shallow shelf of the Anadarko Basin furnished much gas from the Pennsylvanian and Mississippian reservoirs during the 1950s and 1960s. The search for gas reserves on the shelf will continue to go on for many years, because of the relatively low drilling cost even though the reserves per well on the shelf tend to be limited to about 1 to 3 billion cu ft/well. The much greater reserves of up to 50 billion cu ft/well found in the deeper part of the Anadarko Basin have made the deep Anadarko Basin an enticing area to look for major gas reserves.more » A regional Hunton map of the deep Anadarko Basin is presented showing fields that are producing from the Hunton and Simpson at depths of more than 15,000 ft. The fields shown on this map represent about 5 trillion cu ft of gas reserve. A generalized section showing only the major features and gross stratigraphic intervals also is presented. A seismic interpretation of the N. Carter structure on which the Lone Star l Baden is drilled is shown, one the seismic Springer structure and the other the seismic Hunton structure. The latter shows the faulting that exists below the Springer level.« less

Investigations of photosynthetic light harvesting by two-dimensional electronic spectroscopy

NASA Astrophysics Data System (ADS)

Read, Elizabeth Louise

Photosynthesis begins with the harvesting of sunlight by antenna pigments, organized in a network of pigment-protein complexes that rapidly funnel energy to photochemical reaction centers. The intricate design of these systems---the widely varying structural motifs of pigment organization within proteins and protein organization within a larger, cooperative network---underlies the remarkable speed and efficiency of light harvesting. Advances in femtosecond laser spectroscopy have enabled researchers to follow light energy on its course through the energetic levels of photosynthetic systems. Now, newly-developed femtosecond two-dimensional electronic spectroscopy reveals deeper insight into the fundamental molecular interactions and dynamics that emerge in these structures. The following chapters present investigations of a number of natural light-harvesting complexes using two-dimensional electronic spectroscopy. These studies demonstrate the various types of information contained in experimental two-dimensional spectra, and they show that the technique makes it possible to probe pigment-protein complexes on the length- and time-scales relevant to their functioning. New methods are described that further extend the capabilities of two-dimensional electronic spectroscopy, for example, by independently controlling the excitation laser pulse polarizations. The experiments, coupled with theoretical simulation, elucidate spatial pathways of energy flow, unravel molecular and electronic structures, and point to potential new quantum mechanical mechanisms of light harvesting.

Geometry of a large-scale low-angle mid-crustal thrust (Woodroffe Thrust, Central Australia)

NASA Astrophysics Data System (ADS)

Wex, Sebastian; Mancktelow, Neil S.; Hawemann, Friedrich; Pennacchioni, Giorgio; Camacho, Alfredo

2015-04-01

Young orogens, such as the Alps, mainly expose the upper part of the continental crust and it is not possible to follow large-scale thrusts (e.g. the Glarus Thrust) to great depth in order to study their changing rheological behavior. This knowledge, however, is crucial for determining the overall kinematic and dynamic response during collision, as middle to lower crustal rocks represent the major part of the total crustal section. Information from deeper parts of the continental crust can only be obtained directly by investigating regions where these levels are now exhumed. The Musgrave Ranges in Central Australia is a very well exposed, semi-desert area, in which numerous large-scale shear zones developed during the Petermann Orogeny around 550 Ma. The most prominent structure is the ˜400 km long E-W trending Woodroffe Thrust, which placed ˜1.2 Ga granulites onto similarly-aged amphibolite and granulite facies gneisses along a generally south-dipping thrust plane with a top-to-north shear sense. Geothermobarometric calculations on the associated mylonites established that the structure developed under mid-crustal conditions (500-650°C, 0.8-1 GPa). Regional P/T variations in the direction of thrusting are small, but show trends consistent with the south-dipping orientation of the thrust plane, which predicts deeper levels and a higher metamorphic grade in the south than in the north. They imply a very low gradient of only around 3°C/km for a distance of some 30 km in the movement direction of the thrust. Combined with a geothermal gradient on the order of 20°C/km, calculated from four separate P/T estimates from the hanging wall and footwall, this regional gradient indicates that the Woodroffe Thrust was originally shallow-dipping at an average angle of only around 9°. This suggests that upper crustal brittle thrusts do not necessarily steepen into the middle to lower crust, but can define very shallow-dipping, large-scale planar features, with dimensions in the order of hundreds of kilometres. Such a geometry would require the rocks to be weak, but field observations (e.g. large volumes of syn-tectonic pseudotachylyte) argue for strong behaviour, involving alternating fast (seismic) fracturing and slow (aseismic) creep.

THE ROLE OF AN IMMIGRANT MOTHER IN HER ADOLESCENT'S IDENTITY FORMATION: "WHO AM I?".

PubMed

Mann, Mali

2016-06-01

Immigration is a complex bio-psycho-social process and the immigrant mother has a truly complex task in lending her ego strength to her adolescent offspring. The normal adolescence's decathexis of the love object and the consequent search for a new object may not happen smoothly for those adolescents whose mothers are immigrants. The immigration experience may cause the immigrant mother, who lost her motherland, deeper disturbance in self-identity as well as disequilibrium in her psychic structure, which in turn impacts adversely her adolescent's development. The adolescent's inadequate early experience with an immigrant mother may result in a deeper disturbance in his separation-individuation process as well as his identification process. An immigrant mother who has not mourned adequately, with a different sociocultural background has to go through a far more complex development of motherhood. The case of an adolescent boy, Jason, demonstrates the impact of immigrant motherhood on his ego development.

Demineralization of Enamel in Primary Second Molars Related to Properties of the Enamel

PubMed Central

Sabel, N.; Robertson, A.; Nietzsche, S.; Norén, J. G.

2012-01-01

Enamel structure is of importance in demineralization. Differences in porosity in enamel effect the rate of demineralization, seen between permanent and deciduous teeth. Individual differences have been shown in the mean mineral concentration values in enamel, the role of this in demineralization is not thoroughly investigated. The aim of this study was to study variations of depths of artificial lesions of demineralization and to analyze the depth in relation to variations in the chemical and mineral composition of the enamel. A demineralized lesion was created in second primary molars from 18 individuals. Depths of lesions were then related to individual chemical content of the enamel. Enamel responded to demineralization with different lesion depths and this was correlated to the chemical composition. The carbon content in sound enamel was shown to be higher where lesions developed deeper. The lesion was deeper when the degree of porosity of the enamel was higher. PMID:22629152

Understanding the interaction of concanavalin a with mannosyl glycoliposomes: A surface plasmon resonance and fluorescence study.

PubMed

Sandoval-Altamirano, Catalina; Sanchez, Susana A; Ferreyra, Nancy F; Gunther, German

2017-10-01

The specificity of carbohydrate-protein interaction is a key factor in many biological processes and it is the foundation of technologies using glycoliposomes in drug delivery. The incorporation of glycolipids in vesicles is expected to increase their specificity toward particular targets such as lectins; however, the degree of exposure of the carbohydrate moiety at the liposome surface is a crucial parameter to be considered in the interaction. Herein we report the synthesis of mannose derivatives with one or two hydrophobic chains of different length, designed with the purpose of modifying the degree of exposure of the mannose when they were incorporated into liposomes. The interaction of glycovesicles with Con A was studied using: (i) agglutination assays; measured by dynamic laser light scattering (DLS); (ii) time resolved fluorescence methods and (iii) surface plasmon resonance (SPR) kinetic measurements. DLS data showed that an increase in hydrophobic chain length promotes a decrease of liposomes hydrodynamic radius. A longer hydrocarbon chain favors a deeper insertion into the bilayer and mannose moiety results less exposed at the surface to interact with lectin. Fluorescence experiments showed changes in the structure of glycovesicles due to the interaction with the protein. From SPR measurements the kinetic and equilibrium constants associated to the interaction of ConA with the different glycolipid synthetized were determined. The combination of SPR and fluorescence techniques allowed to study the interaction of Con A with mannosyl glycovesicles at three levels: at the surface, at the interface and deeper into the bilayer. Copyright © 2017 Elsevier B.V. All rights reserved.

Long-term fluid expulsion revealed by carbonate crusts and pockmarks connected to subsurface gas anomalies and palaeo-channels in the central North Sea

NASA Astrophysics Data System (ADS)

Chand, Shyam; Crémière, Antoine; Lepland, Aivo; Thorsnes, Terje; Brunstad, Harald; Stoddart, Daniel

2017-06-01

Gas seepage through the seafloor into the water column is inferred based on acoustic mapping, video observations and geochemical analyses at multiple locations in the Viking Graben and Utsira High areas of the central North Sea. Flares in the Viking Graben occur both inside and along the periphery of a submarine melt water channel where pockmarks (up to 500 m in diameter) and methane-derived carbonate crusts are found on the seafloor, indicating focussing of fluid flow in the vicinity of the channel. The flares can be related to gas accumulations close to the seafloor as well as in Quaternary and deeper strata, observed as high-amplitude reflections on seismic data. Many palaeo-channels, which act as accumulation zones, are observed in the subsurface of both the Viking Graben and Utsira High areas. The deeper origin of gas is partially supported by results of isotope analyses of headspace gas collected from sediment samples of the Viking Graben, which show a mixed microbial/thermogenic origin whereas isotope data on free seeping gas in the Viking Graben indicate a predominantly microbial origin. Based on these lines of evidence, a structure-controlled fluid flow model is proposed whereby hydrocarbons migrate in limited amount from deep thermogenic reservoirs along faults, and these deep fluids are strongly diluted by microbial methane. Moreover, the existence of subsurface pockmarks at several stratigraphic levels indicates long-term fluid flow, interpreted to be caused by gas hydrate destabilisation and stress-related high overpressures.

K-shuff: A Novel Algorithm for Characterizing Structural and Compositional Diversity in Gene Libraries.

PubMed

Jangid, Kamlesh; Kao, Ming-Hung; Lahamge, Aishwarya; Williams, Mark A; Rathbun, Stephen L; Whitman, William B

2016-01-01

K-shuff is a new algorithm for comparing the similarity of gene sequence libraries, providing measures of the structural and compositional diversity as well as the significance of the differences between these measures. Inspired by Ripley's K-function for spatial point pattern analysis, the Intra K-function or IKF measures the structural diversity, including both the richness and overall similarity of the sequences, within a library. The Cross K-function or CKF measures the compositional diversity between gene libraries, reflecting both the number of OTUs shared as well as the overall similarity in OTUs. A Monte Carlo testing procedure then enables statistical evaluation of both the structural and compositional diversity between gene libraries. For 16S rRNA gene libraries from complex bacterial communities such as those found in seawater, salt marsh sediments, and soils, K-shuff yields reproducible estimates of structural and compositional diversity with libraries greater than 50 sequences. Similarly, for pyrosequencing libraries generated from a glacial retreat chronosequence and Illumina® libraries generated from US homes, K-shuff required >300 and 100 sequences per sample, respectively. Power analyses demonstrated that K-shuff is sensitive to small differences in Sanger or Illumina® libraries. This extra sensitivity of K-shuff enabled examination of compositional differences at much deeper taxonomic levels, such as within abundant OTUs. This is especially useful when comparing communities that are compositionally very similar but functionally different. K-shuff will therefore prove beneficial for conventional microbiome analysis as well as specific hypothesis testing.

3DIANA: 3D Domain Interaction Analysis: A Toolbox for Quaternary Structure Modeling

PubMed Central

Segura, Joan; Sanchez-Garcia, Ruben; Tabas-Madrid, Daniel; Cuenca-Alba, Jesus; Sorzano, Carlos Oscar S.; Carazo, Jose Maria

2016-01-01

Electron microscopy (EM) is experiencing a revolution with the advent of a new generation of Direct Electron Detectors, enabling a broad range of large and flexible structures to be resolved well below 1 nm resolution. Although EM techniques are evolving to the point of directly obtaining structural data at near-atomic resolution, for many molecules the attainable resolution might not be enough to propose high-resolution structural models. However, accessing information on atomic coordinates is a necessary step toward a deeper understanding of the molecular mechanisms that allow proteins to perform specific tasks. For that reason, methods for the integration of EM three-dimensional maps with x-ray and NMR structural data are being developed, a modeling task that is normally referred to as fitting, resulting in the so called hybrid models. In this work, we present a novel application—3DIANA—specially targeted to those cases in which the EM map resolution is medium or low and additional experimental structural information is scarce or even lacking. In this way, 3DIANA statistically evaluates proposed/potential contacts between protein domains, presents a complete catalog of both structurally resolved and predicted interacting regions involving these domains and, finally, suggests structural templates to model the interaction between them. The evaluation of the proposed interactions is computed with DIMERO, a new method that scores physical binding sites based on the topology of protein interaction networks, which has recently shown the capability to increase by 200% the number of domain-domain interactions predicted in interactomes as compared to previous approaches. The new application displays the information at a sequence and structural level and is accessible through a web browser or as a Chimera plugin at http://3diana.cnb.csic.es. PMID:26772592

Designing across ages: Multi-agent-based models and learning electricity

NASA Astrophysics Data System (ADS)

Sengupta, Pratim

Electricity is regarded as one of the most challenging topics for students at all levels -- middle school -- college (Cohen, Eylon, & Ganiel, 1983; Belcher & Olbert, 2003; Eylon & Ganiel, 1990; Steinberg et al., 1985). Several researchers have suggested that naive misconceptions about electricity stem from a deep incommensurability (Slotta & Chi, 2006; Chi, 2005) or incompatibility (Chi, Slotta & Leauw, 1994; Reiner, Slotta, Chi, & Resnick, 2000) between naive and expert knowledge structures. I first present an alternative theoretical framework that adopts an emergent levels-based perspective as proposed by Wilensky & Resnick (1999). From this perspective, macro-level phenomena such as electric current and resistance, as well as behavior of linear electric circuits, can be conceived of as emergent from simple, body-syntonic interactions between electrons and ions in a circuit. I argue that adopting such a perspective enables us to reconceive commonly noted misconceptions in electricity as behavioral evidences of "slippage between levels" -- i.e., these misconceptions appear when otherwise productive knowledge elements are sometimes inappropriately activated due to certain macro-level phenomenological cues only -- and, that the same knowledge elements when activated due to phenomenological cues at both micro- and macro-levels, can engender a deeper, expert-like understanding. I will then introduce NIELS (NetLogo Investigations In Electromagnetism, Sengupta & Wilensky, 2006, 2008, 2009), a low-threshold high-ceiling (LTHC) learning environment of multi-agent-based computational models that represent phenomena such as electric current and resistance, as well as the behavior of linear electric circuits, as emergent. I also present results from implementations of NIELS in 5th, 7th and 12th grade classrooms that show the following: (a) how leveraging certain "design elements" over others in NIELS models can create new phenomenological cues, which in turn can be appropriated for learners in different grades; (b) how learners' existing knowledge structures can be bootstrapped to generate deep understanding; (c) how these knowledge structures evolve as the learners progress through the implemented curriculum; (d) improvement of learners' understanding in the post-test compared to the pre-test; and (e) how NIELS students compare with a comparison group of 12th grade students who underwent traditional classroom instruction.

Elaboration Likelihood and the Counseling Process: The Role of Affect.

ERIC Educational Resources Information Center

Stoltenberg, Cal D.; And Others

The role of affect in counseling has been examined from several orientations. The depth of processing model views the efficiency of information processing as a function of the extent to which the information is processed. The notion of cognitive processing capacity states that processing information at deeper levels engages more of one's limited…

Using community insight to understand physical activity adoption in overweight and obese African American and Hispanic women: A qualitative study

USDA-ARS?s Scientific Manuscript database

Ecologic models suggest that multiple levels of influencing factors are important for determining physical activity participation and include individual, social, and environmental factors. The purpose of this qualitative study was to use an ecologic framework to gain a deeper understanding of the un...

Pursuing the Depths of Knowledge

ERIC Educational Resources Information Center

Boyles, Nancy

2016-01-01

Today's state literacy standards and assessments demand deeper levels of knowledge from students. But many teachers ask, "What does depth of knowledge look like on these new, more rigorous assessments? How do we prepare students for this kind of thinking?" In this article, Nancy Boyles uses a sampling of questions from the PARCC and SBAC…

Greenhouse Effect in the Classroom: A Project- and Laboratory-Based Curriculum.

ERIC Educational Resources Information Center

Lueddecke, Susann B.; Pinter, Nicholas; McManus, Scott A.

2001-01-01

Tests a multifaceted curriculum for use in introductory earth science classes from the secondary school to the introductory undergraduate level. Simulates the greenhouse effect with two fish tanks, heat lamps, and thermometers. Uses a hands-on science approach to develop a deeper understanding of the climate system among students. (Contains 28…

Do High School Chemistry Examinations Inhibit Deeper Level Understanding of Dynamic Reversible Chemical Reactions?

ERIC Educational Resources Information Center

Wheeldon, R.; Atkinson, R.; Dawes, A.; Levinson, R.

2012-01-01

Background and purpose: Chemistry examinations can favour the deployment of algorithmic procedures like Le Chatelier's Principle (LCP) rather than reasoning using chemical principles. This study investigated the explanatory resources which high school students use to answer equilibrium problems and whether the marks given for examination answers…

Students' Quality of Mathematical Discussion and Their Self-Determination in Mathematics

ERIC Educational Resources Information Center

Kosko, Karl W.; Wilkins, Jesse L. M.

2012-01-01

Mathematical discussion allows for students to reflect upon math concepts and understand such concepts at a deeper level. This process of reflection requires a certain amount of internalization on the part of the student. This internalization is facilitated by meeting the needs of autonomy, competence, and relatedness as advocated by…

Concept-Based Learning

ERIC Educational Resources Information Center

Schill, Bethany; Howell, Linda

2011-01-01

A major part of developing concept-based instruction is the use of an overarching idea to provide a conceptual lens through which students view the content of a particular subject. By using a conceptual lens to focus learning, students think at a much deeper level about the content and its facts (Erickson 2007). Therefore, the authors collaborated…

Analyzing the Learning Process of an Online Role-Playing Discussion Activity

ERIC Educational Resources Information Center

Hou, Huei-Tse

2012-01-01

Instructional activities based on online discussion strategies have gained prevalence in recent years. Within this context, a crucial research topic is to design innovative and appropriate online discussion strategies that assist learners in attaining a deeper level of interaction and higher cognitive skills. By analyzing the process of online…

Tamarisk and river restoration along the San Pedro and Gila Rivers

Treesearch

Juliet Stromberg; Sharon Lite; Charles Paradzick

2005-01-01

The abundance of tamarisk (Tamarix ramosissima and related species) along the San Pedro and Gila River flood plains varies with differences in stream flow regimes. Tamarisk abundance, relative to Fremont cottonwood and Goodding willow, is greater at sites with more intermittent stream flows and deeper and more fluctuating ground-water levels....

Enhancing Learning in Clinical Placements: Reflective Practice, Self-Assessment, Rubrics and Scaffolding

ERIC Educational Resources Information Center

Stupans, Ieva; March, Geoff; Owen, Susanne M.

2013-01-01

Professional preparatory health programmes generally involve clinical placements with a focus on integration of theory into real life practice. Reflective writing is often included in the assessment requirements for clinical placement courses. However enabling students to engage in deeper levels of reflective writing in action, on action and for…

The Public Understanding of Science: 30 Years of the Bodmer Report

ERIC Educational Resources Information Center

Short, Daniel B.

2013-01-01

As research probes deeper into all aspects of science, greater specialisation is required. This natural progression takes knowledge and understanding further away from the general public. Hence part of the responsibility of scientists is to communicate that knowledge at an appropriate level of understanding. As most people do not actively follow…

Theorising Catholic Education: The Relevance of Bourdieu and Bernstein for Empirical Research

ERIC Educational Resources Information Center

Byrne, Richard; Devine, Dympna

2017-01-01

The broader theoretical frameworks of both Bourdieu (and his concepts of habitus, field, doxa, collusio and capital) and Bernstein (and his concepts of classification, framing and ritual) provide a deeper understanding of the distinctiveness of Catholic schooling. This article presents a model for theorising Catholic schooling in which levels of…

Outsourcing: friend or foe.

PubMed

Capko, Judy

2005-01-01

With rising costs and tight controls on reimbursement, physicians need to dig deeper into expenses and find ways to reduce costs while tapping into an equal or higher level of expertise. Outsourcing offers an attractive solution. This article identifies the areas where outsourcing is most valuable and effective, and provides some methodologies for achieving a successful result.

Explaining Electrical Circuits

ERIC Educational Resources Information Center

Hodgson-Drysdale, Tracy; Ballard, Edward

2011-01-01

Science is more than learning a collection of facts. In the classroom, it is about creating a deeper level of understanding of the world and providing students with the tools to share that knowledge. One can share knowledge orally or in writing, in a variety of genres such as reports, arguments, and explanations. This article describes a unit…

Climate Change in the Preservice Teacher's Mind

ERIC Educational Resources Information Center

Lambert, Julie L.; Bleicher, Robert E.

2013-01-01

Given the recent media attention on the public's shift in opinion toward being more skeptical about climate change, 154 preservice teachers' participated in an intervention in an elementary science methods course. Findings indicated that students developed a deeper level of concern about climate change. Their perceptions on the evidence…

Investigating Convergence Patterns for Numerical Methods Using Data Analysis

ERIC Educational Resources Information Center

Gordon, Sheldon P.

2013-01-01

The article investigates the patterns that arise in the convergence of numerical methods, particularly those in the errors involved in successive iterations, using data analysis and curve fitting methods. In particular, the results obtained are used to convey a deeper level of understanding of the concepts of linear, quadratic, and cubic…

LOL Teacher! Using Humor to Enhance Student Learning

ERIC Educational Resources Information Center

Terrell, Shelly

2015-01-01

Laughing with students can help them connect on a deeper level with the teacher and the learning. This article offers the following four strategies to incorporate humor into teaching: (1) Integrate humorous bits to boost engagement; (2) Choose humorous materials; (3) Create interest with humorous web tools and apps; and (4) Teach with silly…

Using Cartoons to Teach about Perfectionism: Supporting Gifted Students' Social-Emotional Development

ERIC Educational Resources Information Center

Rule, Audrey C.; Montgomery, Sarah E.

2013-01-01

Cartoon interpretation and production are teaching strategies that can assist students in a deeper understanding of concepts and practice of higher level thinking skills while motivating them through humor. This article presents an extended example of graduate students in an introductory course in gifted education creating humorous cartoons to…

Brief Daily Writing Activities and Performance on Major Multiple-Choice Exams

ERIC Educational Resources Information Center

Turner, Haley C.; Bliss, Stacy L.; Hautau, Briana; Carroll, Erin; Jaspers, Kathryn E.; Williams, Robert L.

2006-01-01

Although past research indicates that giving brief quizzes, administered either regularly or randomly, may lead to improvement in students' performance on major exams, negligible research has targeted daily writing activities that require the processing of course information at a deeper level than might result from simply reading course materials…

Utilizing Field-Based Instruction as an Effective Teaching Strategy

ERIC Educational Resources Information Center

Kozar, Joy M.; Marcketti, Sara B.

2008-01-01

The purpose of this study was to examine the effectiveness of field-based instruction on student learning outcomes. Researchers in the past have noted the importance of engaging students on a deeper level through the use of active course designs. To investigate the outcomes of active learning, two field assignments created for two separate…

Identifying the North American plum species phylogenetic signal using nuclear, mitochondrial, and chloroplast DNA markers

USDA-ARS?s Scientific Manuscript database

Premise of the study: Prunus L. phylogeny has extensively studied using cpDNA sequences. CpDNA has a slow rate of evolution which is beneficial to determine species relationships at a deeper level. However, a limitation of the chloroplast based phylogenies is its transfer by interspecific hybridizat...

The Educational Situation in Utopia: Why "What Is," Is

ERIC Educational Resources Information Center

Seaman, Jayson; Quay, John

2015-01-01

In this response to Molly Ware's review of our 2013 book, "John Dewey and Education Outdoors," we extend her suggestion that complexity be regarded as an important, generative force in education reform. Drawing on Dewey's 1933 "Utopian Schools" speech, we discuss the "level deeper" that Dewey sought as he…

76 FR 34656 - Taking and Importing Marine Mammals; Geological and Geophysical Exploration of Mineral and Energy...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-06-14

..., but not limited to, migration, breathing, nursing, breeding, feeding, or sheltering (Level B... surveys [WAZ]), and ocean bottom surveys [OBS], and (2) high resolution surveys. Deep Seismic Surveys For... seismic surveys (2D, 3D, or WAZ) are typically deeper penetrating than high resolution surveys and may...

Access to Global Learning: A Matter of Will

ERIC Educational Resources Information Center

Van Hook, Steven R.

2006-01-01

Governments and individuals are increasingly turning to education to provide a deeper understanding of the world at large. However, with only 17 percent of the world's population able to advance beyond secondary education levels, new technologies and learning models are called upon to fulfill the need. Current developments in computer versatility,…

A Fruitful Activity for Finding the Greatest Common Factor

ERIC Educational Resources Information Center

Bell, Carol J.; Leisner, Heather J.; Shelley, Kristina

2011-01-01

Posing mathematics problems in different ways will raise students' level of cognitive demand because it will push them to think more deeply about mathematics. By engaging students in a task that requires them to determine their own solution strategies, students will gain a deeper understanding of the mathematical concept explored through the task.…

Tropical Storm Blas off the Pacific Coast of Mexico

NASA Image and Video Library

2004-07-14

Tropical Storm Blas as observed by the Atmospheric Infrared Sounder AIRS onboard NASA Aqua in the year 2004. The major contribution to radiation (infrared light) that AIRS channels sense comes from different levels in the atmosphere, depending upon the channel wavelength. To create the movie, a set of AIRS channels were selected which probe the atmosphere at progressively deeper levels. If there were no clouds, the color in each frame would be nearly uniform until the Earth's surface is encountered. The tropospheric air temperature warms at a rate of 6 K (about 11 F) for each kilometer of descent toward the surface. Thus the colors would gradually change from cold to warm as the movie progresses. Clouds block the infrared radiation. Thus wherever there are clouds we can penetrate no deeper in infrared. The color remains fixed as the movie progresses, for that area of the image is "stuck" to the cloud top temperature. The coldest temperatures around 220 K (about -65 F) come from altitudes of about 10 miles. http://photojournal.jpl.nasa.gov/catalog/PIA00436

Going deeper: teaching more than the mechanics

NASA Astrophysics Data System (ADS)

Bruck, R. A.

2013-02-01

What follows is a description of an introductory holography course titled "Lasers and Holography," taught by the author at Columbia College Chicago since 1997. Because this is a science class at an arts college with an open admissions policy, these students have many different levels of education, dissimilar backgrounds, and varied fields of interest. There are few science majors. Therefore, specific learning objectives are developed. The author contends that for many of these students it is not enough to teach the physics of making holograms. To inspire and instill a lifelong appreciation for science and physics, one must go still deeper. Students need to be touched on more than just an intellectual level. Consequently, a broader approach is used. Ultimately, it may stir students to want to learn more, and to be confident they can. The paper addresses: 1) Becoming aware of one's individual state of seeing 2) Perceptual illusions: their impact on the advancement of science 3) Promoting artistic applications and exposing students to fine art holography 4) Teaching holography as an information processing, as well as an image-making technology 5) Introducing and exploring philosophical implications of holographic principles.

Roots of Musicality: On Neuro-Musical Thresholds and New Evidence for Bridges between Musical Expression and "Inner Growth"

ERIC Educational Resources Information Center

Perret, Daniel

2004-01-01

This paper aims to establish a link between the felt quality in musical expression and the psycho-somatic structure of the person playing. This includes specific areas of the body, a corresponding set of emotions and thought patterns, as well as the deeper needs of the person. Discernment of felt quality is facilitated by using the symbolic…

Atomic Fine-Structure Diagnostic and Cooling Transitions for Far Infrared and Submillimeter Observations

NASA Astrophysics Data System (ADS)

Balance, Connor

Some of the strongest emission lines observed from a variety of astronomical sources originate from transitions between fine-structure levels in the ground term of neutral atoms and lowly-charged ions. These fine-structure levels are populated due to collisions with -, H+, H, He, and/or H2 depending on the temperature and ionization fraction of e the environment. As fine-structure excitation measurements are rare, modeling applications depend on theoretically determined rate coefficients. However, for many ions electron collision studies have not been performed for a decade or more, while over that time period the theoretical/computational methodology has significantly advanced. For heavy-particle collisions, very few systems have been studied. As a result, most models rely on estimates or on low-quality collisional data for fine-structure excitation. To significantly advance the state of fine-structure data for astrophysical models, we propose a collaborative effort in electron collisions, heavy-particle collisions, and quantum chemistry. Using the R-matrix method, fine-structure excitation due to electron collisions will be investigated for C, O, Ne^+, Ne^2+, Ar^+, Ar^2+, Fe, Fe^+, and Fe^2+. Fine-structure excitation due to heavy-particle collisions will be studied with a fully quantum molecular-orbital approach using potential energy surfaces computed with a multireference configuration-interaction method. The systems to be studied include: C/H^+, C/H2, O/H^+, O/H2, Ne^+/H, Ne^+/H2, Ne^2+/H, Ne^2+/H2, Fe/H^+, Fe^+/H, and Fe^2+/H. 2D rigid-rotor surfaces will be constructed for H2 collisions, internuclear distance dependent spin-orbit coupling will be computed in some cases, and all rate coefficients will be obtained for the temperature range 10-2000 K. The availability the proposed fine-structure excitation data will lead to deeper examination and understanding of the properties of many astrophysical environments, including young stellar objects, protoplanetary disks, planetary nebulae, photodissociation regions, active galactic nuclei, and x-ray dominated regions, hence elevating the scientific return from current (SOFIA, Spitzer, Herschel, HST) and upcoming (JWST) NASA IR/Submm astrophysics missions, as well as from ground-based telescopes.

Heterogeneities in Axonal Structure and Transporter Distribution Lower Dopamine Reuptake Efficiency

PubMed Central

Block, Ethan R.; Bartol, Tom M.; Sorkin, Alexander

2018-01-01

Abstract Efficient clearance of dopamine (DA) from the synapse is key to regulating dopaminergic signaling. This role is fulfilled by DA transporters (DATs). Recent advances in the structural characterization of DAT from Drosophila (dDAT) and in high-resolution imaging of DA neurons and the distribution of DATs in living cells now permit us to gain a mechanistic understanding of DA reuptake events in silico. Using electron microscopy images and immunofluorescence of transgenic knock-in mouse brains that express hemagglutinin-tagged DAT in DA neurons, we reconstructed a realistic environment for MCell simulations of DA reuptake, wherein the identity, population and kinetics of homology-modeled human DAT (hDAT) substates were derived from molecular simulations. The complex morphology of axon terminals near active zones was observed to give rise to large variations in DA reuptake efficiency, and thereby in extracellular DA density. Comparison of the effect of different firing patterns showed that phasic firing would increase the probability of reaching local DA levels sufficiently high to activate low-affinity DA receptors, mainly owing to high DA levels transiently attained during the burst phase. The experimentally observed nonuniform surface distribution of DATs emerged as a major modulator of DA signaling: reuptake was slower, and the peaks/width of transient DA levels were sharper/wider under nonuniform distribution of DATs, compared with uniform. Overall, the study highlights the importance of accurate descriptions of extrasynaptic morphology, DAT distribution, and conformational kinetics for quantitative evaluation of dopaminergic transmission and for providing deeper understanding of the mechanisms that regulate DA transmission. PMID:29430519

A post audit of a model-designed ground water extraction system.

PubMed

Andersen, Peter F; Lu, Silong

2003-01-01

Model post audits test the predictive capabilities of ground water models and shed light on their practical limitations. In the work presented here, ground water model predictions were used to design an extraction/treatment/injection system at a military ammunition facility and then were re-evaluated using site-specific water-level data collected approximately one year after system startup. The water-level data indicated that performance specifications for the design, i.e., containment, had been achieved over the required area, but that predicted water-level changes were greater than observed, particularly in the deeper zones of the aquifer. Probable model error was investigated by determining the changes that were required to obtain an improved match to observed water-level changes. This analysis suggests that the originally estimated hydraulic properties were in error by a factor of two to five. These errors may have resulted from attributing less importance to data from deeper zones of the aquifer and from applying pumping test results to a volume of material that was larger than the volume affected by the pumping test. To determine the importance of these errors to the predictions of interest, the models were used to simulate the capture zones resulting from the originally estimated and updated parameter values. The study suggests that, despite the model error, the ground water model contributed positively to the design of the remediation system.

The management of stress in MOCVD-grown InGaN/GaN LED multilayer structures on Si(1 1 1) substrates

NASA Astrophysics Data System (ADS)

Jiang, Quanzhong; Allsopp, Duncan W. E.; Bowen, Chris R.; Wang, Wang N.

2013-09-01

The tensile stress in light-emitting diode (LED)-on-Si(1 1 1) multilayer structures must be reduced so that it does not compromise the multiple quantum well emission wavelength uniformity and structural stability. In this paper it is shown for non-optimized LED structures grown on Si(1 1 1) substrates that both emission wavelength uniformity and structural stability can be achieved within the same growth process. In order to gain a deeper understanding of the stress distribution within such a structure, cross-sectional Raman and photo-luminescence spectroscopy techniques were developed. It is observed that for a Si:GaN layer grown on a low-temperature (LT) AlN intermediate layer there is a decrease in compressive stress with increasing Si:GaN layer thickness during MOCVD growth which leads to a high level of tensile stress in the upper part of the layer. This may lead to the development of cracks during cooling to room temperature. Such a phenomenon may be associated with annihilation of defects such as dislocations. Therefore, a reduction of dislocation intensity should take place at the early stage of GaN growth on an AlN or AlGaN layer in order to reduce a build up of tensile stress with thickness. Furthermore, it is also shown that a prolonged three dimensional GaN island growth on a LT AlN interlayer for the reduction of dislocations may result in a reduction in the compressive stress in the resulting GaN layer.

Movements of florida apple snails in relation to water levels and drying events

USGS Publications Warehouse

Darby, P.C.; Bennetts, R.E.; Miller, S.J.; Percival, H.F.

2002-01-01

Florida apple snails (Pomacea Paludosa) apparently have only a limited tolerance to wetland drying events (although little direct evidence exists), but their populations routinely face dry downs under natural and managed water regimes. In this paper, we address speculation that apple snails respond to decreasing water levels and potential drying events by moving toward refugia that remain inundated. We monitored the movements of apple snails in central Florida, USA during drying events at the Blue Cypress Marsh (BC) and at Lake Kissimmee (LK). We monitored the weekly movements of 47 BC snails and 31 LK snails using radio-telemetry. Snails tended to stop moving when water depths were 10 cm. Snails moved along the greatest positive depth gradient (i.e., towards deeper water) when they encountered water depths between 10 and 20 cm. Snails tended to move toward shallower water in water depths ???50 cm, suggesting that snails were avoiding deep water areas such as canals and sloughs. Of the 11 BC snails originally located in the area that eventually went dry, three (27%) were found in deep water refugia by the end of the study. Only one of the 31 LK snails escaped the drying event by moving to deeper water. Our results indicate that some snails may opportunistically escape drying events through movement. The tendency to move toward deeper water was statistically significant and indicates that this behavioral trait might enhance survival when the spatial extent of a dry down is limited. However, as water level falls below 10 cm, snails stop moving and become stranded. As the spatial extent of a dry down increases, we predict that the number of snails stranded would increase proportionally. Stranded Pomacea paludosa must contend with dry marsh conditions, possibly by aestivation. Little more than anecdotal information has been published on P. paludosa aestivation, but it is a common adaptation among other apple snails (Caenogastropoda: Ampullaridae). ?? 2002, The Society of Wetland Scientists.

A Resource for Eliciting Student Alternative Conceptions: Examining the Adaptability of a Concept Inventory for Natural Selection at the Secondary School Level

NASA Astrophysics Data System (ADS)

Lucero, Margaret M.; Petrosino, Anthony J.

2017-08-01

The Conceptual Inventory of Natural Selection (CINS) is an example of a research-based instrument that assesses conceptual understanding in an area that contains well-documented alternative conceptions. Much of the CINS's use and original validation has been relegated to undergraduate settings, but the information learned from student responses on the CINS can also potentially be a useful resource for teachers at the secondary level. Because of its structure, the CINS can have a role in eliciting alternative conceptions and induce deeper conceptual understanding by having student ideas leveraged during instruction. In a first step toward this goal, the present study further investigated the CINS's internal properties by having it administered to a group ( n = 339) of students among four different biology teachers at a predominantly Latino, economically disadvantaged high school. In addition, incidences of the concept inventory's use among the teachers' practices were collected for support of its adaptability at the secondary level. Despite the teachers' initial enthusiasm for the CINS's use as an assessment tool in the present study, results from a principal components analysis demonstrate inconsistencies between the original and present validations. Results also reveal how the teachers think CINS items may be revised for future use among secondary student populations.

Landscape-scale changes in forest canopy structure across a partially logged tropical peat swamp

NASA Astrophysics Data System (ADS)

Wedeux, B. M. M.; Coomes, D. A.

2015-11-01

Forest canopy structure is strongly influenced by environmental factors and disturbance, and in turn influences key ecosystem processes including productivity, evapotranspiration and habitat availability. In tropical forests increasingly modified by human activities, the interplay between environmental factors and disturbance legacies on forest canopy structure across landscapes is practically unexplored. We used airborne laser scanning (ALS) data to measure the canopy of old-growth and selectively logged peat swamp forest across a peat dome in Central Kalimantan, Indonesia, and quantified how canopy structure metrics varied with peat depth and under logging. Several million canopy gaps in different height cross-sections of the canopy were measured in 100 plots of 1 km2 spanning the peat dome, allowing us to describe canopy structure with seven metrics. Old-growth forest became shorter and had simpler vertical canopy profiles on deeper peat, consistent with previous work linking deep peat to stunted tree growth. Gap size frequency distributions (GSFDs) indicated fewer and smaller canopy gaps on the deeper peat (i.e. the scaling exponent of Pareto functions increased from 1.76 to 3.76 with peat depth). Areas subjected to concessionary logging until 2000, and illegal logging since then, had the same canopy top height as old-growth forest, indicating the persistence of some large trees, but mean canopy height was significantly reduced. With logging, the total area of canopy gaps increased and the GSFD scaling exponent was reduced. Logging effects were most evident on the deepest peat, where nutrient depletion and waterlogged conditions restrain tree growth and recovery. A tight relationship exists between canopy structure and peat depth gradient within the old-growth tropical peat swamp forest. This relationship breaks down after selective logging, with canopy structural recovery, as observed by ALS, modulated by environmental conditions. These findings improve our understanding of tropical peat swamp ecology and provide important insights for managers aiming to restore degraded forests.

Folding pattern in the Fars province, Zagros folded belt: case study on the Karbasi and Khaftar anticlines, interior Fars, Iran

NASA Astrophysics Data System (ADS)

Maleki, Z.; Arian, M.; Solgi, A.

2015-08-01

The anticlines in Fars region, which are located in Zagros fold-thrust belt, are valuable because they possess several hydrocarbons and this area is easily recognized by the NW-SE trending parallel anticlines that verge to the SW. According to the geological classification, the study area is located in Interior Fars region. Due to increasing complication of structural geometry in Fars region and necessity to explore activities for deeper horizons especially the Paleozoic ones, the analysis of fold style elements, which is known as one of the main parts in structural studies, seems necessary. The Karbasi and Khaftar anticlines are case study anticlines in the interior Fars sub-basin (Fassa area). These anticlines have an asymmetric structure and some faults with large strike separation are observed in these structures. Due to increasing complication of structural geometry in Fars region and necessity to explore activities for deeper horizons especially the Paleozoic ones, the analysis of fold style elements, which is known as one of the main parts in structural studies, seems necessary. Description of fold geometry is important because it allows comparisons within and between folds and also allows us to recognize patterns in the occurrence and distribution of fold systems. The main aim of this paper is to determine fold style elements and folding pattern in the study area. This paper presents a part of the results of a regional study of Fars province in the Zagros Simply folded belt, based on satellite images, geological maps, and well data. In the Interior Fars area, it seems that folding pattern is controlled by structural elements such as the Nezamabad basement fault and Dashtak formation. In fact, as a middle detachment unit, Dashtak formation plays an important role regarding folding geometry and fold in style in the study area.

Simultaneous inversion of intrinsic and scattering attenuation parameters incorporating multiple scattering effect

NASA Astrophysics Data System (ADS)

Ogiso, M.

2017-12-01

Heterogeneous attenuation structure is important for not only understanding the earth structure and seismotectonics, but also ground motion prediction. Attenuation of ground motion in high frequency range is often characterized by the distribution of intrinsic and scattering attenuation parameters (intrinsic Q and scattering coefficient). From the viewpoint of ground motion prediction, both intrinsic and scattering attenuation affect the maximum amplitude of ground motion while scattering attenuation also affect the duration time of ground motion. Hence, estimation of both attenuation parameters will lead to sophisticate the ground motion prediction. In this study, we try to estimate both parameters in southwestern Japan in a tomographic manner. We will conduct envelope fitting of seismic coda since coda has sensitivity to both intrinsic attenuation and scattering coefficients. Recently, Takeuchi (2016) successfully calculated differential envelope when these parameters have fluctuations. We adopted his equations to calculate partial derivatives of these parameters since we did not need to assume homogeneous velocity structure. Matrix for inversion of structural parameters would become too huge to solve in a straightforward manner. Hence, we adopted ART-type Bayesian Reconstruction Method (Hirahara, 1998) to project the difference of envelopes to structural parameters iteratively. We conducted checkerboard reconstruction test. We assumed checkerboard pattern of 0.4 degree interval in horizontal direction and 20 km in depth direction. Reconstructed structures well reproduced the assumed pattern in shallower part while not in deeper part. Since the inversion kernel has large sensitivity around source and stations, resolution in deeper part would be limited due to the sparse distribution of earthquakes. To apply the inversion method which described above to actual waveforms, we have to correct the effects of source and site amplification term. We consider these issues to estimate the actual intrinsic and scattering structures of the target region.Acknowledgment We used the waveforms of Hi-net, NIED. This study was supported by the Earthquake Research Institute of the University of Tokyo cooperative research program.

Early-mid-Cretaceous evolution in Tethyan reef communities and sea level

DOE Office of Scientific and Technical Information (OSTI.GOV)

Scott, R.W.

1988-01-01

The replacement of corals by rudists in Early Cretaceous reefal communities spanned a 30-m.y. period when sea level rose and drowned continental shelves. During this time corals formed communities in the deeper parts of reefs and rudists occupied the shallow, high-energy habitats. By Aptian time rudists dominated reefs that fringed interior shelf basins and corals formed reefs with rudists on the outer shelf margins. By late Albian coral communities had virtually disappeared, presumably because of complex environmental changes and cycles of organic productivity. Two important events of eustatic sea level rise are represented by unconformities separating carbonate depositional sequences onmore » the Arabian platform that correlate with sequence boundaries on the Gulf Coast platform. Graphic correlation techniques test the synchroneity of these events. A composite standard time scale dates these sea level rises at 115.8 Ma and 94.6 Ma; a third, intra-Albian event at 104.3 Ma is present in many places and may also be eustatic. Associated with these sea level rises were apparent changes in ocean water chemistry as evidenced by changes in isotopes and trace elements, where diagenetic effects can be discounted. During this time the climate became more humid and atmospheric CO/sub 2/ increased. The concomitant environmental changes in the oceanic conditions presumably stressed the deeper coral communities on reefs. The emergence of rudists as reef contributors had a profound effect on Late Cretaceous depositional conditions and the development of hydrocarbon reservoirs.« less

Early-mid-Cretaceous evolution in Tethyan reef communities and sea level

DOE Office of Scientific and Technical Information (OSTI.GOV)

Scott, R.W.

1988-02-01

The replacement of corals by rudists in Early Cretaceous reefal communities spanned a 30-m.y. period when sea level rose and drowned continental shelves. During this time corals formed communities in the deeper parts of reefs and rudists occupied the shallow, high-energy habitats. By Aptian time rudists dominated reefs that fringed interior shelf basins and corals formed reefs with rudists on the outer shelf margins. By late Albian coral communities had virtually disappeared, presumably because of complex environmental changes and cycles of organic productivity. Two important events of eustatic sea level rise are represented by unconformities separating carbonate depositional sequences onmore » the Arabian platform that correlate with sequence boundaries on the Gulf Coast platform. Graphic correlation techniques test the synchroneity of these events. A composite standard time scale dates these sea level rises at 115.8 Ma and 94.6 Ma; a third, intra-Albian event at 104.3 Ma is present in many places and may also be eustatic. Associated with these sea level rises were apparent changes in ocean water chemistry as evidenced by changes in isotopes and trace elements, where diagenetic effects can be discounted. During this time the climate became more humid and atmospheric CO/sub 2/ increased. The concomitant environmental changes in the oceanic conditions presumably stressed the deeper coral communities on reefs. The emergence of rudists as reef contributors had a profound effect on Late Cretaceous depositional conditions and the development of hydrocarbon reservoirs.« less

Uranus’ cloud structure and seasonal variability from Gemini-North and UKIRT observations

NASA Astrophysics Data System (ADS)

Irwin, P. G. J.; Teanby, N. A.; Davis, G. R.; Fletcher, L. N.; Orton, G. S.; Tice, D.; Kyffin, A.

2011-03-01

Observations of Uranus were made in September 2009 with the Gemini-North telescope in Hawaii, using both the NIFS and NIRI instruments. Observations were acquired in Adaptive Optics mode and have a spatial resolution of approximately 0.1″. NIRI images were recorded with three spectral filters to constrain the overall appearance of the planet: J, H-continuum and CH4(long), and long slit spectroscopy measurements were also made (1.49-1.79 μm) with the entrance slit aligned on Uranus’ central meridian. To acquire spectra from other points on the planet, the NIFS instrument was used and its 3″ × 3″ field of view stepped across Uranus’ disc. These observations were combined to yield complete images of Uranus at 2040 wavelengths between 1.476 and 1.803 μm. The observed spectra along Uranus central meridian were analysed with the NEMESIS retrieval tool and used to infer the vertical/latitudinal variation in cloud optical depth. We find that the 2009 Gemini data perfectly complement our observations/conclusions from UKIRT/UIST observations made in 2006-2008 and show that the north polar zone at 45°N has continued to steadily brighten while that at 45°S has continued to fade. The improved spatial resolution of the Gemini observations compared with the non-AO UKIRT/UIST data removes some of the earlier ambiguities with our previous analyses and shows that the opacity of clouds deeper than the 2-bar level does indeed diminish towards the poles and also reveals a darkening of the deeper cloud deck near the equator, perhaps coinciding with a region of subduction. We find that the clouds at 45°N,S lie at slightly lower pressures than the clouds at more equatorial latitudes, which suggests that they might possibly be composed of a different condensate, presumably CH4 ice, rather than H2S or NH3 ice, which is assumed for the deeper cloud. In addition, analysis of the centre-to-limb curves of both the Gemini/NIFS and earlier UKIRT/UIST IFU observations shows that the main cloud deck has a well-defined top, and also allows us to better constrain the particle scattering properties. Overall, Uranus appeared to be less convectively active in 2009 than in the previous 3 years, which suggests that now the northern spring equinox (which occurred in 2007) is passed the atmosphere is settling back into the quiescent state seen by Voyager 2 in 1986. However, a number of discrete clouds were still observed, with one at 15°N found to lie near the 500 mb level, while another at 30°N, was seen to be much higher at near the 200 mb level. Such high clouds are assumed to be composed of CH4 ice.

Using statistical and artificial neural network models to forecast potentiometric levels at a deep well in South Texas

NASA Astrophysics Data System (ADS)

Uddameri, V.

2007-01-01

Reliable forecasts of monthly and quarterly fluctuations in groundwater levels are necessary for short- and medium-term planning and management of aquifers to ensure proper service of seasonal demands within a region. Development of physically based transient mathematical models at this time scale poses considerable challenges due to lack of suitable data and other uncertainties. Artificial neural networks (ANN) possess flexible mathematical structures and are capable of mapping highly nonlinear relationships. Feed-forward neural network models were constructed and trained using the back-percolation algorithm to forecast monthly and quarterly time-series water levels at a well that taps into the deeper Evangeline formation of the Gulf Coast aquifer in Victoria, TX. Unlike unconfined formations, no causal relationships exist between water levels and hydro-meteorological variables measured near the vicinity of the well. As such, an endogenous forecasting model using dummy variables to capture short-term seasonal fluctuations and longer-term (decadal) trends was constructed. The root mean square error, mean absolute deviation and correlation coefficient ( R) were noted to be 1.40, 0.33 and 0.77 m, respectively, for an evaluation dataset of quarterly measurements and 1.17, 0.46, and 0.88 m for an evaluative monthly dataset not used to train or test the model. These statistics were better for the ANN model than those developed using statistical regression techniques.

Crown depth as a result of evolutionary games: decreasing solar angle should lead to shallower, not deeper crowns.

PubMed

Vermeulen, Peter Johannes

2014-06-01

There is a general notion in the literature that, with increasing latitude, trees have deeper crowns as a result of a lower solar elevation angle. However, these predictions are based on models that did not include the effects of competition for light between individuals. Here, I argue that there should be selection for trees to increase the height of the crown base, as this decreases shading by neighbouring trees, leading to an evolutionarily stable strategy (ESS). Because the level of between-tree shading increases with decreasing solar angle, the predicted ESS will shift to higher crown base height. This argument is supported by a simulation model to check for the effects of crown shape and the change of light intensity that occurs with changing solar angle on model outcomes. So, the lower solar angle at higher latitudes would tend to select for shallower, and not deeper, crowns. This casts doubt on the common belief that a decreasing solar angle increases crown depth. More importantly, it shows that different assumptions about what should be optimized can lead to different predictions, not just for absolute trait values, but for the direction of selection itself. © 2014 The Author. New Phytologist © 2014 New Phytologist Trust.

Self-organization in suspensions of end-functionalized semiflexible polymers under shear flow

NASA Astrophysics Data System (ADS)

Myung, Jin Suk; Winkler, Roland G.; Gompper, Gerhard

2015-12-01

The nonequilibrium dynamical behavior and structure formation of end-functionalized semiflexible polymer suspensions under flow are investigated by mesoscale hydrodynamic simulations. The hybrid simulation approach combines the multiparticle collision dynamics method for the fluid, which accounts for hydrodynamic interactions, with molecular dynamics simulations for the semiflexible polymers. In equilibrium, various kinds of scaffold-like network structures are observed, depending on polymer flexibility and end-attraction strength. We investigate the flow behavior of the polymer networks under shear and analyze their nonequilibrium structural and rheological properties. The scaffold structure breaks up and densified aggregates are formed at low shear rates, while the structural integrity is completely lost at high shear rates. We provide a detailed analysis of the shear- rate-dependent flow-induced structures. The studies provide a deeper understanding of the formation and deformation of network structures in complex materials.

Deep Molecular Diversity of Mammalian Synapses: Why It Matters and How to Measure It

PubMed Central

O’Rourke, Nancy A.; Weiler, Nick C.; Micheva, Kristina D.; Smith, Stephen J

2013-01-01

Summary Pioneering studies during the middle of the twentieth century revealed substantial diversity amongst mammalian chemical synapses and led to a widely accepted synapse type classification based on neurotransmitter molecule identity. Subsequently, powerful new physiological, genetic and structural methods have enabled the discovery of much deeper functional and molecular diversity within each traditional neurotransmitter type. Today, this deep diversity continues to pose both daunting challenges and exciting new opportunities for neuroscience. Our growing understanding of deep synapse diversity may transform how we think about and study neural circuit development, structure and function. PMID:22573027

Imaging nonmelanoma skin cancers with combined ultrasound-photoacoustic microscopy

NASA Astrophysics Data System (ADS)

Sunar, Ulas; Rohrbach, Daniel J.; Morgan, Janet; Zeitouni, Natalie

2013-03-01

PDT has become a treatment of choice especially for the cases with multiple sites and large areas. However, the efficacy of PDT is limited for thicker and deeper tumors. Depth and size information as well as vascularity can provide useful information to clinicians for planning and evaluating PDT. High-resolution ultrasound and photoacoustic imaging can provide information regarding skin structure and vascularity. We utilized combined ultrasound-photoacoustic microscopy for imaging a basal cell carcinoma (BCC) tumor pre-PDT and the results indicate that combined ultrasound-photoacoustic imaging can be useful tool for PDT planning by providing both structural and functional contrasts.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yu, Qi; Zhu, Fang-Yuan; Cheng, Li-Qian

Crystallographic structure of sol-gel-processed lead-free (K,Na)NbO{sub 3} (KNN) epitaxial films on [100]-cut SrTiO{sub 3} single-crystalline substrates was investigated for a deeper understanding of its piezoelectric response. Lattice parameter measurement by high-resolution X-ray diffraction and transmission electron microscopy revealed that the orthorhombic KNN films on SrTiO{sub 3} (100) surfaces are [010] oriented (b-axis-oriented) rather than commonly identified c-axis orientation. Based on the crystallographic orientation and corresponding ferroelectric domain structure investigated by piezoresponse force microscopy, the superior piezoelectric property along b-axis of epitaxial KNN films than other orientations can be explained.

Basement structures over Rio Grande Rise from gravity inversion

NASA Astrophysics Data System (ADS)

Constantino, Renata Regina; Hackspacher, Peter Christian; de Souza, Iata Anderson; Lima Costa, Iago Sousa

2017-04-01

The basement depth in the Rio Grande Rise (RGR), South Atlantic, is estimated from combining gravity data obtained from satellite altimetry, marine surveys, bathymetry, sediment thickness and crustal thickness information. We formulate a crustal model of the region by inverse gravity modeling. The effect of the sediment layer is evaluated using the global sediment thickness model of National Oceanic and Atmospheric Administration (NOAA) and fitting the sediment compaction model to observed density values from Deep Sea Drilling Project (DSDP) reports. The Global Relief Model ETOPO1 and constraining data from seismic interpretation on crustal thickness are integrated in the inversion process. The modeled Moho depth values vary between 6 and 27 km over the area, being thicker under the RGR and also in the direction of São Paulo Plateau. The inversion for the gravity-equivalent basement topography is applied to gravity residual data, which is free from the gravity effect of sediments and from the gravity effect of the estimated Moho interface. We find several short-wavelengths structures not present in the bathymetry data. Our model shows a rift crossing the entire Rio Grande Rise deeper than previously presented in literature, with depths up to 5 km in the East Rio Grande Rise (ERGR) and deeper in the West Rio Grande Rise (WRGR), reaching 6.4 km. An interesting NS structure that goes from 34°S and extends through de São Paulo Ridge may be related to the South Atlantic Opening and could reveal an extinct spreading center.

Formation of diamonds in laser-compressed hydrocarbons at planetary interior conditions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kraus, D.; Vorberger, J.; Pak, A.

The effects of hydrocarbon reactions and diamond precipitation on the internal structure and evolution of icy giant planets such as Neptune and Uranus have been discussed for more than three decades. Inside these celestial bodies, simple hydrocarbons such as methane, which are highly abundant in the atmospheres, are believed to undergo structural transitions that release hydrogen from deeper layers and may lead to compact stratified cores. Indeed, from the surface towards the core, the isentropes of Uranus and Neptune intersect a temperature–pressure regime in which methane first transforms into a mixture of hydrocarbon polymers, whereas, in deeper layers, a phasemore » separation into diamond and hydrogen may be possible. Here in this paper, we show experimental evidence for this phase separation process obtained by in situ X-ray diffraction from polystyrene (C 8H 8) n samples dynamically compressed to conditions around 150 GPa and 5,000 K; these conditions resemble the environment around 10,000 km below the surfaces of Neptune and Uranus. Our findings demonstrate the necessity of high pressures for initiating carbon–hydrogen separation and imply that diamond precipitation may require pressures about ten times as high as previously indicated by static compression experiments. In conclusion, our results will inform mass–radius relationships of carbon-bearing exoplanets, provide constraints for their internal layer structure and improve evolutionary models of Uranus and Neptune, in which carbon–hydrogen separation could influence the convective heat transport.« less

Formation of diamonds in laser-compressed hydrocarbons at planetary interior conditions

DOE PAGES

Kraus, D.; Vorberger, J.; Pak, A.; ...

2017-08-21

The effects of hydrocarbon reactions and diamond precipitation on the internal structure and evolution of icy giant planets such as Neptune and Uranus have been discussed for more than three decades. Inside these celestial bodies, simple hydrocarbons such as methane, which are highly abundant in the atmospheres, are believed to undergo structural transitions that release hydrogen from deeper layers and may lead to compact stratified cores. Indeed, from the surface towards the core, the isentropes of Uranus and Neptune intersect a temperature–pressure regime in which methane first transforms into a mixture of hydrocarbon polymers, whereas, in deeper layers, a phasemore » separation into diamond and hydrogen may be possible. Here in this paper, we show experimental evidence for this phase separation process obtained by in situ X-ray diffraction from polystyrene (C 8H 8) n samples dynamically compressed to conditions around 150 GPa and 5,000 K; these conditions resemble the environment around 10,000 km below the surfaces of Neptune and Uranus. Our findings demonstrate the necessity of high pressures for initiating carbon–hydrogen separation and imply that diamond precipitation may require pressures about ten times as high as previously indicated by static compression experiments. In conclusion, our results will inform mass–radius relationships of carbon-bearing exoplanets, provide constraints for their internal layer structure and improve evolutionary models of Uranus and Neptune, in which carbon–hydrogen separation could influence the convective heat transport.« less

High-resolution ultrasonic imaging of the posterior segment.

PubMed

Coleman, D Jackson; Silverman, Ronald H; Chabi, Almira; Rondeau, Mark J; Shung, K Kirk; Cannata, Jon; Lincoff, Harvey

2004-07-01

Conventional ophthalmic ultrasonography is performed using 10-megahertz (MHz) transducers. Our aim was to explore the use of higher frequency ultrasound to provide improved resolution of the posterior pole. Prospective case series. One normal subject and 5 subjects with pathologies affecting the posterior coats, including nevii, small melanomas, and macular hole. We modeled the frequency-dependent attenuation of ultrasound across the eye to develop an understanding of the range of frequencies that might be practically applied for imaging of the posterior pole. We compared images of the posterior coats made at 10, 15, and 20 MHz, and 20-MHz ultrasound images of pathologies with 10-MHz ultrasound and optical coherence tomography (OCT). Ability to resolve normal and pathologic structures affecting posterior coats of the eye. Modeling showed that frequencies of 20 to 25 MHz might be used for posterior pole imaging. Twenty-megahertz images allowed differentiation of the retina, choroid, and sclera. In addition, at 20 MHz the retina showed banding patterns suggesting an internal structure comparable in many respects to that seen in OCT and histology. Images of ocular pathology provided much improved detail relative to 10-MHz images and deeper penetration than OCT. Twenty-megahertz ultrasound can be practically employed for imaging of the posterior pole of the eye, providing a 2-fold improvement in resolution relative to conventional 10-MHz instruments. Although not providing the resolution of OCT, ultrasound can be used in the presence of optical opacities and allows evaluation of deeper tissue structures.

West Virginia Digital Learning: Report to the Governor, Legislature, and West Virginia Board of Education

ERIC Educational Resources Information Center

Alliance for Excellent Education, 2014

2014-01-01

Accomplishing personalized, deeper learning through anywhere, anytime digital learning requires a redesign of the K-12 education system. This report looks at readiness for digital learning at two levels in West Virginia: the district capacity building to ready the system for digital learning and school implementation of digital learning. The…

Digging Deeper: Making Sense of Student Loan Debt in Texas. Research Report

ERIC Educational Resources Information Center

TG (Texas Guaranteed Student Loan Corporation), 2012

2012-01-01

Student loans are likely to remain a prominent instrument for paying for college in Texas, a necessary financial tool for low- and moderate-income students. As college costs rise and growing enrollments further stretch grant funds, the policy challenge is to assist students in determining the appropriate level of student loans for their individual…

Student Connections with Academic Texts: A Phenomenographic Study of Reading

ERIC Educational Resources Information Center

MacMillan, Margy

2014-01-01

Concerns about the ability of post-secondary students to read scholarly materials are well documented in the literature. A key aspect of reading at the deeper level expected of these students is connecting new information to prior knowledge. This study is based on an activity where students were explicitly required to make such connections as part…

Beyond the Surface: A Guide to Substantive World Fairs in the Social Studies

ERIC Educational Resources Information Center

Maguth, Brad M.; Yamaguchi, Misato

2010-01-01

In an age of increasing global and multicultural forces, the social studies is usually the subject charged with promoting a deeper level of understanding in regards to cultural diversity. To achieve this mission, many social studies teachers have turned to the use of world fairs. However, these activities often end up promoting surface level…

The significance of urban trees and forests: toward a deeper understanding of values

Treesearch

John F. Dwyer; Herbert W. Schroeder; Paul H. Gobster

1991-01-01

Many city dwellers hold very strong personal ties to urban trees and forests, with some attachments approaching a spiritual involvement. Ties between people and trees are associated with traditions, symbolism, and the need to "get involved" at the local level to sustain or enhance the environment for present and future generations. Urban forestry programs...

Jupiter Hot Spot

NASA Image and Video Library

2001-01-03

In this movie clip (of which the release image is a still frame), created from images taken by NASA's Cassini spacecraft, the blue region in the center is a relatively cloud-free area where thermal radiation from warmer, deeper levels emerges. NASA's Galileo probe in 1995 entered Jupiter's atmosphere in a similar area. http://photojournal.jpl.nasa.gov/catalog/PIA02875

Development and Use of Early Warning Systems. SLDS Spotlight

ERIC Educational Resources Information Center

Curtin, Jenny; Hurwitch, Bill; Olson, Tom

2012-01-01

An early warning system is a data-based tool that helps predict which students are on the right path towards eventual graduation or other grade-appropriate goals. Through such systems, stakeholders at the school and district levels can view data from a wide range of perspectives and gain a deeper understanding of student data. This "Statewide…

Using Community Insight to Understand Physical Activity Adoption in Overweight and Obese African American and Hispanic Women: A Qualitative Study

ERIC Educational Resources Information Center

Mama, Scherezade K.; McCurdy, Sheryl A.; Evans, Alexandra E.; Thompson, Deborah I.; Diamond, Pamela M.; Lee, Rebecca E.

2015-01-01

Ecologic models suggest that multiple levels of influencing factors are important for determining physical activity participation and include individual, social, and environmental factors. The purpose of this qualitative study was to use an ecologic framework to gain a deeper understanding of the underlying behavioral mechanisms that influence…

Empowerment of African American Women Leaders in Higher Education: A Multiple Case Study

ERIC Educational Resources Information Center

McDaniel, Sharon L.

2016-01-01

The purpose of this study was to gain an understanding of the perspectives on empowerment held by African American women who work in executive positions within higher educational settings. This study also seeks to provide other women with a deeper level of awareness regarding the journey towards executive leadership. Current literature explores…

Planning and Designing for K-12 Next Generation Learning

ERIC Educational Resources Information Center

Edwards, Dave

2015-01-01

The changing demands of the 21st century--and the students growing up in it--are generating fundamental challenges to historical assumptions about what education looks like. The challenge today is to provide a deeper level of personalized learning to each and every student so that all can achieve mastery of the Common Core standards and other…

Ritualistic Games, Boundary Control, and Information Uncertainty

ERIC Educational Resources Information Center

Harviainen, J. Tuomas

2012-01-01

This article examines the information environment of ritual-like games. Using tools from library and information science and the cognitive study of religion, it shows that certain key phenomena in games can be modeled as patterns of information and thus examined to a deeper level than before. This is of particular use to game scholars wishing to…

Self-Regulated Learning in Learning Environments with Pedagogical Agents that Interact in Natural Language

ERIC Educational Resources Information Center

Graesser, Arthur; McNamara, Danielle

2010-01-01

This article discusses the occurrence and measurement of self-regulated learning (SRL) both in human tutoring and in computer tutors with agents that hold conversations with students in natural language and help them learn at deeper levels. One challenge in building these computer tutors is to accommodate, encourage, and scaffold SRL because these…

The Power of Life Histories: Moving Readers to Greater Acts of Empathy through Literature and Memoir

ERIC Educational Resources Information Center

Lee, Valarie G.; Madden, Marjorie E.

2016-01-01

This paper argues that narratives, specifically literature and memoir, offer a way to build empathy and understanding by moving readers to deeper levels of text interpretation and critique. The paper examines a new literacy framework, Life Histories, that uses talk, collaboration, writing, and performance to understand the complex relationships…

The Poetry of John Dewey

ERIC Educational Resources Information Center

Williams, Jerry L.

2016-01-01

This essay examines the poetry of John Dewey, 101 poems in total. Characteristic of the rhymed and metered poetry of the period, they show a very human side of Dewey. This analysis argues that many of his poems deal with existential themes--love, finitude, and God, for example. On a deeper level these poems are also show connections to Dewey's…

Diversity and Social Justice--Beyond Motherhood and Apple Pie

ERIC Educational Resources Information Center

Arshad, Rowena

2017-01-01

The majority of teachers are aware that inequalities impact on the lives of individual pupils. For others, there is also deeper awareness of how inequalities impact at community and societal levels. For those who work in areas of multiple deprivation, many are reminded on a daily basis of the "everydayness" of coping or survival for…

Approaches to Biology Teaching and Learning: Understanding the Wrong Answers--Teaching toward Conceptual Change

ERIC Educational Resources Information Center

Tanner, Kimberly; Allen, Deborah

2005-01-01

Underpinning science education reform movements in the last 20 years--at all levels and within all disciplines--is an explicit shift in the goals of science teaching from students simply creating a knowledge base of scientific facts to students developing deeper understandings of major concepts within a scientific discipline. For example, what use…

What Do We Know and What Do We Want to Know about Related Services Personnel?

ERIC Educational Resources Information Center

Rapport, Mary Jane K.; Williamson, Pamela

2004-01-01

District and building-level administrators are often responsible for the hiring and supervising of related services personnel. Thus, a deeper understanding of the personnel issues that exist in the related services disciplines becomes important. What we know about the supply and demand, professional preparation, and certification and licensure of…

In Their Own Words: Coteaching Project at Prosper High School Helps Students Create Video PSAs

ERIC Educational Resources Information Center

Cameron, Stacy; Butcher, Adria; Haight, Christine

2012-01-01

Collaboration and coteaching with classroom teachers and campus specialists are the cornerstones of a successful school library program. Whereas collaboration is the process of planning a lesson or unit of instruction, coteaching suggests a much deeper level of collaboration--one in which both the teacher and campus specialist (be it school…

The Effect of Reflective Thinking on the Teaching Practices of Preservice Physical Education Teachers

ERIC Educational Resources Information Center

Dervent, Fatih

2015-01-01

The purpose of this study is to determine the effect of reflective thinking on the professional teaching practices of preservice physical education teachers and to explore their reflective levels. Within the qualitative research paradigm, action research was used to gain a deeper understanding of the reflective experiences of preservice physical…

Taking Clickers to the Next Level: A Contingent Teaching Model

ERIC Educational Resources Information Center

Stewart, Sepideh; Stewart, Wayne

2013-01-01

Over the past decade, many researchers have discussed the effectiveness of clickers and their potential to change the way we teach and interact with students. Although most of the literature revolves around elementary usage of clickers, the deeper questions of how to integrate this technology into teaching are largely unanswered. In this paper, we…

Deep Learning in Distance Education: Are We Achieving the Goal?

ERIC Educational Resources Information Center

Shearer, Rick L.; Gregg, Andrea; Joo, K. P.

2015-01-01

As educators, one of our goals is to help students arrive at deeper levels of learning. However, how is this accomplished, especially in online courses? This design-based research study explored the concept of deep learning through a series of design changes in a graduate education course. A key question that emerged was through what learning…

Examining the Level of Content Knowledge of Recent Business Education Graduates

ERIC Educational Resources Information Center

Fletcher, Edward C., Jr.; Mountjoy, Kathy; Bailey, Glenn

2011-01-01

The majority of studies regarding the preparation of teachers in the area of content knowledge indicate there is a lack of deeper understanding of the subject matter in which teachers are licensed to teach (Wilson, Floden, & Ferrini-Mundy, 2001). The purpose of this Delphi research study was to identify the perceptions of recent business education…

Identification of third-order (approx. 10{sup 6} yrs) and fourth-order (approx. 10{sup 5}/10{sup 4} yrs) stratigraphic cycles in the South Addition, West Cameron Lease Area, Louisiana offshore

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lowrie, A.; Meeks, P.; Hoffman, K.

In the highly explored South Addition of the West Cameron Lease Area, Louisiana offshore, interpretation of a six-mile ({approx}10 km) seismic section across a single intraslope basin yielded 20 sediment packages. Several interpretive tools were necessary. Seismic stratigraphy indicated that the shallower zone was an outer shelf marked by 8 major sea level oscillations. In the portion between 1 and 3 seconds, seismic stratigraphy and paleontology led to the interpretation of depositional environments such as upper slope, and paleobathymetrically deeper intervals with descent through the section. The intraslope basin, while small, may be viewed as a micro-continental margin. Each seamore » level oscillation cycle apparently made a distinct progradational unit, decipherable in the seismic data. Fourth order cycles have been provisionally interpreted, throughout most of the entire 3.7 second section. Such precision is possible only in explored basins with excellent seismic data. The sequence thickness showed a seven-fold variability, from 0.08 to 0.58 seconds. The shallower section, deposited along an outer shelf, has an average individual sequence thickness of 0.13 seconds. Individual seismic sequences in the deeper section, interpreted to have been deposited on an upper slope, have average thicknesses of 0.25 seconds. The thinner sequences of the shallower section are compatible with the notion that the outer shelf was a bypass zone during a glacial epoch. The thicker sequences of the deeper section are the result of deposition onto an aggrading upper slope within an intraslope basin during a highstand.« less

A Review on the Applications of Next Generation Sequencing Technologies as Applied to Food-Related Microbiome Studies

PubMed Central

Cao, Yu; Fanning, Séamus; Proos, Sinéad; Jordan, Kieran; Srikumar, Shabarinath

2017-01-01

The development of next generation sequencing (NGS) techniques has enabled researchers to study and understand the world of microorganisms from broader and deeper perspectives. The contemporary advances in DNA sequencing technologies have not only enabled finer characterization of bacterial genomes but also provided deeper taxonomic identification of complex microbiomes which in its genomic essence is the combined genetic material of the microorganisms inhabiting an environment, whether the environment be a particular body econiche (e.g., human intestinal contents) or a food manufacturing facility econiche (e.g., floor drain). To date, 16S rDNA sequencing, metagenomics and metatranscriptomics are the three basic sequencing strategies used in the taxonomic identification and characterization of food-related microbiomes. These sequencing strategies have used different NGS platforms for DNA and RNA sequence identification. Traditionally, 16S rDNA sequencing has played a key role in understanding the taxonomic composition of a food-related microbiome. Recently, metagenomic approaches have resulted in improved understanding of a microbiome by providing a species-level/strain-level characterization. Further, metatranscriptomic approaches have contributed to the functional characterization of the complex interactions between different microbial communities within a single microbiome. Many studies have highlighted the use of NGS techniques in investigating the microbiome of fermented foods. However, the utilization of NGS techniques in studying the microbiome of non-fermented foods are limited. This review provides a brief overview of the advances in DNA sequencing chemistries as the technology progressed from first, next and third generations and highlights how NGS provided a deeper understanding of food-related microbiomes with special focus on non-fermented foods. PMID:29033905

Twelve tips for using digital storytelling to promote reflective learning by medical students.

PubMed

Sandars, John; Murray, Christopher; Pellow, Andy

2008-01-01

Digital storytelling has potential to motivate students to engage in reflective learning since it uses a range of new technologies and multimedia that are more familiar to young people. The use of visual and audio media offers creative opportunities that can motivate students to develop deeper learning. A structured approach to creating a digital story is essential so that its potential is achieved.

Linguistic Extensions of Topic Models

DTIC Science & Technology

2010-09-01

Movie Legally Multiplex Heralded As Linchpin To Growth The Shape of Cinema , Transformed At the Click of a Mouse A Peaceful Crew Puts Muppets...Linguistic Representation of Multiple Languages The formalism of WordNet has been applied to many languages from different language families, e.g. Japanese ...could be also share information gleaned from 100 reviews on Amazon.com’s Japanese and German language sites. 6.2.3 Learning Deeper Structures and Testing

Nanometer resolution optical coherence tomography using broad bandwidth XUV and soft x-ray radiation

DOE PAGES

Fuchs, Silvio; Rödel, Christian; Blinne, Alexander; ...

2016-02-10

Optical coherence tomography (OCT) is a non-invasive technique for cross-sectional imaging. It is particularly advantageous for applications where conventional microscopy is not able to image deeper layers of samples in a reasonable time, e.g. in fast moving, deeper lying structures. However, at infrared and optical wavelengths, which are commonly used, the axial resolution of OCT is limited to about 1 μm, even if the bandwidth of the light covers a wide spectral range. Here, we present extreme ultraviolet coherence tomography (XCT) and thus introduce a new technique for non-invasive cross-sectional imaging of nanometer structures. XCT exploits the nanometerscale coherence lengthsmore » corresponding to the spectral transmission windows of, e.g., silicon samples. The axial resolution of coherence tomography is thus improved from micrometers to a few nanometers. Tomographic imaging with an axial resolution better than 18 nm is demonstrated for layer-type nanostructures buried in a silicon substrate. Using wavelengths in the water transmission window, nanometer-scale layers of platinum are retrieved with a resolution better than 8 nm. As a result, XCT as a nondestructive method for sub-surface tomographic imaging holds promise for several applications in semiconductor metrology and imaging in the water window.« less

Gravity data inversion for 3D topography of the Moho discontinuity by separation of sources in Taiwan region

NASA Astrophysics Data System (ADS)

Lo, Y. T.; Yen, H. Y.

2012-04-01

Taiwan is located at a complex juncture between the Eurasian and Philippine Sea plates. The mountains in Taiwan are very young, formed as a result of the collision between an island arc system and the Asian continental margin. To separate sources of gravity field in depth, a method is suggested, based on upward and downward continuation. Both new methods are applied to isolate the contribution of the Moho interface to the total field and to find its 3D topography. At the first stage, we separate near surface and deeper sources. At the next stage, we isolate the effect of very deep sources. After subtracting this field from the total effect of deeper sources, we obtain the contribution of the Moho interface. We make inversion separately for the area. In this study, we use the detail gravity data around this area to investigate the reliable subsurface density structure. First, we combine with land and marine gravity data to obtain gravity anomaly. Second, considering the geology, tomography and other constrains, we simulate the 3D density structure. The main goal of our study is to understand the Moho topography and sediment-crustal boundary in Taiwan area. We expect that our result can consistent with previous studies.

A Structured-Inquiry Approach to Teaching Neurophysiology Using Computer Simulation

PubMed Central

Crisp, Kevin M.

2012-01-01

Computer simulation is a valuable tool for teaching the fundamentals of neurophysiology in undergraduate laboratories where time and equipment limitations restrict the amount of course content that can be delivered through hands-on interaction. However, students often find such exercises to be tedious and unstimulating. In an effort to engage students in the use of computational modeling while developing a deeper understanding of neurophysiology, an attempt was made to use an educational neurosimulation environment as the basis for a novel, inquiry-based research project. During the semester, students in the class wrote a research proposal, used the Neurodynamix II simulator to generate a large data set, analyzed their modeling results statistically, and presented their findings at the Midbrains Neuroscience Consortium undergraduate poster session. Learning was assessed in the form of a series of short term papers and two 10-min in-class writing responses to the open-ended question, “How do ion channels influence neuronal firing?”, which they completed on weeks 6 and 15 of the semester. Students’ answers to this question showed a deeper understanding of neuronal excitability after the project; their term papers revealed evidence of critical thinking about computational modeling and neuronal excitability. Suggestions for the adaptation of this structured-inquiry approach into shorter term lab experiences are discussed. PMID:23494064

Utility of additional tissue sections in dermatopathology: diagnostic, clinical and financial implications.

PubMed

Stuart, Lauren N; Rodriguez, Adrianna S; Gardner, Jerad M; Foster, Toby E; MacKelfresh, Jamie; Parker, Douglas C; Chen, Suephy C; Stoff, Benjamin K

2014-02-01

As histopathologic assessment is subject to sampling error, some institutions 'preorder' deeper sections on some or all cases (hereafter referred to as prospective deeper sections), while others order additional sections only when needed (hereafter referred to as retrospective deeper sections). We investigated how often additional sections changed a diagnosis and/or clinical management. Given the recent decrease in reimbursement for CPT-code 88305, we also considered the financial implications of ordering additional sections. Cases (n = 204) were assigned a preliminary diagnosis, based on review of the initial slide, and a final diagnosis, after reviewing additional sections. Cases with discordant diagnoses were assessed by two dermatologists, who indicated whether the change in diagnosis altered clinical management. Expenses were estimated for three scenarios: (a) no additional sections, (b) prospective deeper sections and (c) retrospective deeper sections. Diagnoses were modified in 9% of cases, which changed clinical management in 56% of these cases. Lesions obtained by punch-biopsy and inflammatory lesions were disproportionately overrepresented amongst cases with changed diagnoses (p < 0.001, p = 0.12, respectively). The cost of prospective deeper sections and retrospective deeper sections represented a 56% and 115% increase over base costs, respectively. Labor costs, particularly the cost of dermatopathologist evaluation, were the most significant cost-drivers. While additional sections improve diagnostic accuracy, they delay turn-around-time and increase expenditures. In our practice, prospective deeper sections are cost effective, however, this may vary by institution. © 2013 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

Supporting Situation Assessment through Attention Guidance: A Cost-Benefit and Depth of Processing Analysis

DTIC Science & Technology

2001-01-01

Factors, 30(1), 15-24. Craik , F.I.M. & Lockhart , R.S. (1972). Levels of processing : A framework for memory research. Journal of Verbal Learning and... processing ( Craik & Lockhart , 1972) for a particular unit (i.e., whether cueing would increase or decrease the memory for separate attributes of the cued...without processing these cues at a deeper level . Yeh and Wickens (2001, in press) found a similar response bias (beta) in observers who believed the

Mechanical Feedback and Arrest in Gene Expression

NASA Astrophysics Data System (ADS)

Sevier, Stuart; Levine, Herbert

The ability to watch biochemical events at the single-molecule level has increasingly revealed that stochasticity plays a leading role in many biological phenomena. One important and well know example is the noisy, ``bursty'' manner of transcription. Recent experiments have revealed relationships between the level and noise in gene expression hinting at deeper stochastic connections. In this talk we will discuss how the mechanical nature of transcription can explain this relationship and examine the limits that the physical aspects of transcription place on gene expression.

Modification of electron states in CdTe absorber due to a buffer layer in CdTe/CdS solar cells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fedorenko, Y. G., E-mail: y.fedorenko@liverpool.ac.uk; Major, J. D.; Pressman, A.

2015-10-28

By application of the ac admittance spectroscopy method, the defect state energy distributions were determined in CdTe incorporated in thin film solar cell structures concluded on ZnO, ZnSe, and ZnS buffer layers. Together with the Mott-Schottky analysis, the results revealed a strong modification of the defect density of states and the concentration of the uncompensated acceptors as influenced by the choice of the buffer layer. In the solar cells formed on ZnSe and ZnS, the Fermi level and the energy position of the dominant deep trap levels were observed to shift closer to the midgap of CdTe, suggesting the mid-gapmore » states may act as recombination centers and impact the open-circuit voltage and the fill factor of the solar cells. For the deeper states, the broadening parameter was observed to increase, indicating fluctuations of the charge on a microscopic scale. Such changes can be attributed to the grain-boundary strain and the modification of the charge trapped at the grain-boundary interface states in polycrystalline CdTe.« less

Effect of pH on turbidity, size, viscosity and the shape of sodium caseinate aggregates with light scattering and rheometry.

PubMed

Ghorbani Gorji, Sara; Ghorbani Gorji, Elham; Mohammadifar, Mohammad Amin

2015-03-01

The characterization of sodium caseinate solutions as a function of pH was determined using titration with HCL through turbidimetry in different concentrations (0.03 wt.%, 0.045 wt.%, 0.06 wt.%, 0.09 wt.%, 0.2 wt.%, and 0.3 wt.%). Additionally, the coupling of slow in situ acidification of the solution and rheometry was utilized to gain deeper insights into pH-induced structural transitions during the self assembly process and particle size distribution analysis have been used to determine the behavior of sodium caseinate solutions in different pHs. The formation of aggregates during the acidification process was clearly visualized using microscopy. Surprisingly the viscosity of sodium caseinate solution at pH 4.64 was maximum and decreased by lowering pH. Particle size analysis confirmed the onset of big aggregates on decreasing pH but further acidification led to formation of smaller aggregates. A small concentration effect on pI was seen where at sodium caseinate levels of 0.03 wt.% the pI occurred at 4.29, where at sodium caseinate levels of 0.30 wt.% pI value was 4.64.

Bridging the fields of nanoscience and toxicology: nanoparticle impact on biological models

NASA Astrophysics Data System (ADS)

Ambrosone, A.; Marchesano, V.; Mattera, L.; Tino, A.; Tortiglione, C.

2011-03-01

In the emerging area of nanotechnology a key issue is related to the potential impacts of the novel nanomaterials on the environment and human health so that this technology can be used with minimal risk. Specifically designed to combine on a single structure multipurpose tags and properties, nanomaterials need a comprehensive characterization of both chemicophysical properties and toxicological evaluation, which is a challenging endeavor: the in vitro toxicity assays that are employed for nanotoxicity assessments do not accurately predict in vivo response. To overcome these limitations and gain a deeper understanding of nanoparticle-cell interactions, we have employed cnidarian models, in particular the freshwater polyp Hydra vulgaris, not opposed to more complex and evoluted systems, but to add valuable information, at an intermediate level between prokaryotes and vertebrates, on both cytoxicity and on pollution affecting the environment. By testing CdSe/CdS core shell nanocrystals in vivo, at whole animal level, we investigated the impact of their properties on uptake, accumulation, biodistribution, elicitation of behavioural responses. Spanning from animal to cell biology, we provide an analysis on metal based and semiconductor NC, discussing the crucial role played by the synthesis route and chemical surface on the toxicity for living organisms.

Hotspot volcanism in the southern South Atlantic: Geophysical constraints on the evolution of the southern Walvis Ridge and the Discovery Seamounts

NASA Astrophysics Data System (ADS)

Jokat, Wilfried; Reents, Stefanie

2017-10-01

The southern Atlantic hosts a variety of magmatic structures, namely the Walvis Ridge, the Discovery Seamounts and the Shona Ridge, which are believed to be related to the evolution/movement of hotspots. Although the basement of the Walvis Ridge has been sampled at different locations, geophysical data are too sparse to provide sufficient information about its deeper structure to compare it with other hotspot tracks. The Discovery Seamounts represent a completely different type feature in a way that it cannot be connected to any onshore volcanic feature. However, geological sampling of the volcanic basement indicates that the petrology of the Discovery track is very similar to Gough Island and the southern branch of Walvis Ridge. Both structures erupted into already existing seafloor and so have been seismically investigated to document how/if an associated thermal anomaly might have modified the underlying and surrounding oceanic crust. Seismic lines for both structures indicate rather normal seismic velocity distributions for oceanic crust. Both, the Walvis Ridge and the largest volcano of the Discovery Seamounts have a maximum thickness in our research area of 13 km. An interesting difference between these structures is a high velocity cone (> 6 km/s) at 2.4 km depth in the central part of Discovery Seamount. This might indicate a primarily intrusional type of seamount such as has been reported for several similar structures. In contrast the Walvis Ridge velocity structure does not show evidences for a shallow intrusional cone, but seismic velocities typical for oceanic layer 3 at a more or less constant depth level along the entire profile. This might indicate that the ridge's present-day topography is built mainly by extrusive material.

Chemical bonding in hydrogen and lithium under pressure

DOE PAGES

Naumov, Ivan I.; Hemley, Russell J.; Hoffmann, Roald; ...

2015-08-12

Though hydrogen and lithium have been assigned a common column of the periodic table, their crystalline states under common conditions are drastically different: the former at temperatures where it is crystalline is a molecular insulator whereas the latter is a metal that takes on simple structures. On compression, however, the two come to share some structural and other similarities associated with the insulator-to-metal and metal-to-insulator transitions, respectively. To gain a deeper understanding of differences and parallels in the behaviors of compressed hydrogen and lithium, we performed an ab-initio comparative study of these systems in selected identical structures. Both elements undergomore » a continuous pressure-induced s-p electronic transition, though this is at a much earlier stage of development for H. The valence charge density accumulates in interstitial regions in Li but not in H in structures examined over the same range of compression. Moreover, the valence charge density distributions or electron localization functions for the same arrangement of atoms mirror each other as one proceeds from one element to the other. Application of the viral theorem shows that the kinetic and potential energies jump across the first-order phase transitions in H and Li are opposite in sign because of non-local effects in the Li pseudopotential. Finally, the common tendency of compressed H and Li to adopt three-fold coordinated structures as found is explained by the fact that such structures are capable of yielding a profound pseudogap in the electronic densities of states at the Fermi level, thereby reducing the kinetic energy. Lastly, these results have implications for the phase diagrams of these elements and also for the search for new structures with novel properties.« less

Meta-Design and the Triple Learning Organization in Architectural Design Process

NASA Astrophysics Data System (ADS)

Barelkowski, Robert

2017-10-01

The paper delves into the improvement of Meta-Design methodology being the result of implementation of triple learning organization. Grown from the concept of reflective practice, it offers an opportunity to segregate and hierarchize both criteria and knowledge management and at least twofold application. It induces constant feedback loops recharging the basic level of “design” with second level of “learning from design” and third level of “learning from learning”. While learning from design reflects the absorption of knowledge, structuralization of skills, management of information, learning from learning gives deeper understanding and provides axiological perspective which is necessary when combining cultural, social, and abstract conceptual problems. The second level involves multidisciplinary applications imported from many engineering disciplines, technical sciences, but also psychological background, or social environment. The third level confronts these applications with their respective sciences (wide extra-architectural knowledge) and axiological issues. This distinction may be represented in difference between e.g. purposeful, systemic use of participatory design which again generates experience-by-doing versus use of disciplinary knowledge starting from its theoretical framework, then narrowed down to be relevant to particular design task. The paper discusses the application in two cases: awarded competition proposal of Digital Arts Museum in Madrid and BAIRI university building. Both cases summarize the effects of implementation and expose the impact of triple-loop knowledge circles onto design, teaching the architect or helping them to learn how to manage information flows and how to accommodate paradigm shifts in the architectural design process.

Fractional CO2 laser resurfacing of photoaged facial and non-facial skin: histologic and clinical results and side effects.

PubMed

Sasaki, Gordon H; Travis, Heather M; Tucker, Barbara

2009-12-01

CO(2) fractional ablation offers the potential for facial and non-facial skin resurfacing with minimal downtime and rapid recovery. The purpose of this study was (i) to document the average depths and density of adnexal structures in non-lasered facial and non-facial body skin; (ii) to determine injury in ex vivo human thigh skin with varying fractional laser modes; and (iii) to evaluate the clinical safety and efficacy of treatments. Histologies were obtained from non-lasered facial and non-facial skin from 121 patients and from 14 samples of excised lasered thigh skin. Seventy-one patients were evaluated after varying energy (mJ) and density settings by superficial ablation, deeper penetration, and combined treatment. Skin thickness and adnexal density in non-lasered skin exhibited variable ranges: epidermis (47-105 mum); papillary dermis (61-105 mum); reticular dermis (983-1986 mum); hair follicles (2-14/ HPF); sebaceous glands (2-23/HPF); sweat glands (2-7/HPF). Histological studies of samples from human thigh skin demonstrated that increased fluencies in the superficial, deep and combined mode resulted in predictable deeper levels of ablations and thermal injury. An increase in density settings results in total ablation of the epidermis. Clinical improvement of rhytids and pigmentations in facial and non-facial skin was proportional to increasing energy and density settings. Patient assessments and clinical gradings by the Wilcoxon's test of outcomes correlated with more aggressive settings. Prior knowledge of normal skin depths and adnexal densities, as well as ex vivo skin laser-injury profiles at varying fluencies and densities, improve the safety and efficiency of fractional CO(2) for photorejuvenation of facial and non-facial skin.

Production, pathways and budgets of melts in mid-ocean ridges: An enthalpy based thermo-mechanical model

NASA Astrophysics Data System (ADS)

Mandal, Nibir; Sarkar, Shamik; Baruah, Amiya; Dutta, Urmi

2018-04-01

Using an enthalpy based thermo-mechanical model we provide a theoretical evaluation of melt production beneath mid-ocean ridges (MORs), and demonstrate how the melts subsequently develop their pathways to sustain the major ridge processes. Our model employs a Darcy idealization of the two-phase (solid-melt) system, accounting enthalpy (ΔH) as a function of temperature dependent liquid fraction (ϕ). Random thermal perturbations imposed in this model set in local convection that drive melts to flow through porosity controlled pathways with a typical mushroom-like 3D structure. We present across- and along-MOR axis model profiles to show the mode of occurrence of melt-rich zones within mushy regions, connected to deeper sources by single or multiple feeders. The upwelling of melts experiences two synchronous processes: 1) solidification-accretion, and 2) eruption, retaining a large melt fraction in the framework of mantle dynamics. Using a bifurcation analysis we determine the threshold condition for melt eruption, and estimate the potential volumes of eruptible melts (∼3.7 × 106 m3/yr) and sub-crustal solidified masses (∼1-8.8 × 106 m3/yr) on an axis length of 500 km. The solidification process far dominates over the eruption process in the initial phase, but declines rapidly on a time scale (t) of 1 Myr. Consequently, the eruption rate takes over the solidification rate, but attains nearly a steady value as t > 1.5 Myr. We finally present a melt budget, where a maximum of ∼5% of the total upwelling melt volume is available for eruption, whereas ∼19% for deeper level solidification; the rest continue to participate in the sub-crustal processes.

Towards Reproducible Descriptions of Neuronal Network Models

PubMed Central

Nordlie, Eilen; Gewaltig, Marc-Oliver; Plesser, Hans Ekkehard

2009-01-01

Progress in science depends on the effective exchange of ideas among scientists. New ideas can be assessed and criticized in a meaningful manner only if they are formulated precisely. This applies to simulation studies as well as to experiments and theories. But after more than 50 years of neuronal network simulations, we still lack a clear and common understanding of the role of computational models in neuroscience as well as established practices for describing network models in publications. This hinders the critical evaluation of network models as well as their re-use. We analyze here 14 research papers proposing neuronal network models of different complexity and find widely varying approaches to model descriptions, with regard to both the means of description and the ordering and placement of material. We further observe great variation in the graphical representation of networks and the notation used in equations. Based on our observations, we propose a good model description practice, composed of guidelines for the organization of publications, a checklist for model descriptions, templates for tables presenting model structure, and guidelines for diagrams of networks. The main purpose of this good practice is to trigger a debate about the communication of neuronal network models in a manner comprehensible to humans, as opposed to machine-readable model description languages. We believe that the good model description practice proposed here, together with a number of other recent initiatives on data-, model-, and software-sharing, may lead to a deeper and more fruitful exchange of ideas among computational neuroscientists in years to come. We further hope that work on standardized ways of describing—and thinking about—complex neuronal networks will lead the scientific community to a clearer understanding of high-level concepts in network dynamics, and will thus lead to deeper insights into the function of the brain. PMID:19662159

Time-dependent structural transformation analysis to high-level Petri net model with active state transition diagram.

PubMed

Li, Chen; Nagasaki, Masao; Saito, Ayumu; Miyano, Satoru

2010-04-01

With an accumulation of in silico data obtained by simulating large-scale biological networks, a new interest of research is emerging for elucidating how living organism functions over time in cells. Investigating the dynamic features of current computational models promises a deeper understanding of complex cellular processes. This leads us to develop a method that utilizes structural properties of the model over all simulation time steps. Further, user-friendly overviews of dynamic behaviors can be considered to provide a great help in understanding the variations of system mechanisms. We propose a novel method for constructing and analyzing a so-called active state transition diagram (ASTD) by using time-course simulation data of a high-level Petri net. Our method includes two new algorithms. The first algorithm extracts a series of subnets (called temporal subnets) reflecting biological components contributing to the dynamics, while retaining positive mathematical qualities. The second one creates an ASTD composed of unique temporal subnets. ASTD provides users with concise information allowing them to grasp and trace how a key regulatory subnet and/or a network changes with time. The applicability of our method is demonstrated by the analysis of the underlying model for circadian rhythms in Drosophila. Building ASTD is a useful means to convert a hybrid model dealing with discrete, continuous and more complicated events to finite time-dependent states. Based on ASTD, various analytical approaches can be applied to obtain new insights into not only systematic mechanisms but also dynamics.

3D Density Structure of Oceanic Lithosphere Affected by A Plume: A Case Study from the Greater Jan Mayen-East Greenland Region (NE Atlantic)

NASA Astrophysics Data System (ADS)

Tan, P.; Sippel, J.; Breivik, A. J.; Scheck-Wenderoth, M.; Meeßen, C.

2017-12-01

Unraveling the density structure of the oceanic lithosphere north of Iceland is key for understanding the effects of the Iceland Plume on the mid-ocean ridges of the greater Jan Mayen-East Greenland Region. We use a data-integrative approach for 3D gravity modeling to develop new insights into the crust and upper mantle density structure of this region. First, we obtain the 3D density structure of the sediments and crust from interpretations of regional reflection and refraction seismic lines. Then, the temperature and density structure of the mantle between 50 and 250 km are derived from a published shear-wave velocity (Vs) tomography model. To assess the density configuration between the Moho and 50 km depth, we follow a combined forward and inverse 3D gravity modeling approach. The Vs tomography and derived density of the deeper mantle (>50 km depth) reveal that the low-density anomaly related to the Iceland plume gets weaker with increasing distance from the plume, i.e. from the strongly influenced Middle Kolbeinsey Ridge (MKR) to the Mohn's Ridge. The West Jan Mayen Fracture Zone is identified as a main mantle density contrast, indicative of differences in the thermal evolution of the ridge systems it separates. Beneath the MKR region, the low-density anomaly at depths of >50 km continues upwards into the uppermost mantle, where its lateral dimensions narrow considerably. This elongated density anomaly is consistent with a basement high and indicates a channelization of the Iceland plume effects. The NE-SW elongated mantle anomaly does not, however, coincide with the topographical NNE-SSW striking ridge axis. Thus, the modelled plume-affected oceanic lithosphere reveals discrepancies with the half-space cooling model. We discuss the 3D density model in terms of such spatial relations between deeper mantle anomalies and the shallow crustal structure.

How did Metabolism and Genetic Replication Get Married?

NASA Astrophysics Data System (ADS)

Norris, Vic; Loutelier-Bourhis, Corinne; Thierry, Alain

2012-10-01

In addressing the question of the origins of the relationship between metabolism and genetic replication, we consider the implications of a prebiotic, fission-fusion, ecology of composomes. We emphasise the importance of structures and non-specific catalysis on interfaces created by structures. From the assumption that the bells of the metabolism-replication wedding still echo in modern cells, we argue that the functional assemblies of macromolecules that constitute hyperstructures in modern bacteria are the descendants of composomes and that interactions at the hyperstructure level control the cell cycle. A better understanding of the cell cycle should help understand the original metabolism-replication marriage. This understanding requires new concepts such as metabolic signalling, metabolic sensing and Dualism, which entails the cells in a population varying the ratios of equilibrium to non-equilibrium hyperstructures so as to maximise the chances of both survival and growth. A deeper understanding of the coupling between metabolism and replication may also require a new view of cell cycle functions in creating a coherent diversity of phenotypes and in narrowing the combinatorial catalytic space. To take these ideas into account, we propose the Accordion model in which a dynamic interface between lipid domains catalysed monomer to polymer reactions and became decorated with peptides and nucleotides that favoured their own catalysis. In this model, metabolism, replication, differentiation and division all began together at the interface between extended equilibrium structures within protocells or composomes.

Intraspecific differences in plant chemotype determine the structure of arthropod food webs.

PubMed

Bálint, János; Zytynska, Sharon E; Salamon, Rozália Veronika; Mehrparvar, Mohsen; Weisser, Wolfgang W; Schmitz, Oswald J; Benedek, Klára; Balog, Adalbert

2016-03-01

It is becoming increasingly appreciated that the structure and functioning of ecological food webs are controlled by the nature and level of plant chemicals. It is hypothesized that intraspecific variation in plant chemical resistance, in which individuals of a host-plant population exhibit genetic differences in their chemical contents (called 'plant chemotypes'), may be an important determinant of variation in food web structure and functioning. We evaluated this hypothesis using field assessments and plant chemical assays in the tansy plant Tanacetum vulgare L. (Asteraceae). We examined food webs in which chemotypes of tansy plants are the resource for two specialized aphids, their predators and mutualistic ants. The density of the ant-tended aphid Metopeurum fuscoviride was significantly higher on particular chemotypes (borneol) than others. Clear chemotype preferences between predators were also detected. Aphid specialist seven-spotted ladybird beetles (Coccinella septempunctata) were more often found on camphor plants, while significantly higher numbers of the polyphagous nursery web spider (Pisaura mirabilis) were observed on borneol plants. The analysis of plant chemotype effects on the arthropod community clearly demonstrates a range of possible outcomes between plant-aphid-predator networks. The findings help to offer a deeper insight into how one important factor--plant chemical content--influences which species coexist within a food web on a particular host plant and the nature of their trophic linkages.

Changes in the Structure and Propagation of the MJO with Increasing CO2

NASA Technical Reports Server (NTRS)

Adames, Angel F.; Kim, Daehyun; Sobel, Adam H.; Del Genio, Anthony; Wu, Jingbo

2017-01-01

Changes in the Madden-Julian Oscillation (MJO) with increasing CO2 concentrations are examined using the Goddard Institute for Space Studies Global Climate Model (GCM). Four simulations performed with fixed CO2 concentrations of 0.5, 1, 2 and 4 times pre-industrial levels using the GCM coupled with a mixed layer ocean model are analyzed in terms of the basic state, rainfall and moisture variability, and the structure and propagation of the MJO.The GCM simulates basic state changes associated with increasing CO2 that are consistent with results from earlier studies: column water vapor increases at approximately 7.1% K(exp -1), precipitation also increases but at a lower rate (approximately 3% K(exp -1)), and column relative humidity shows little change. Moisture and rainfall variability intensify with warming. Total moisture and rainfall variability increases at a rate that is similar to that of the mean state change. The intensification is faster in the MJO-related anomalies than in the total anomalies, though the ratio of the MJO band variability to its westward counterpart increases at a much slower rate. On the basis of linear regression analysis and space-time spectral analysis, it is found that the MJO exhibits faster eastward propagation, faster westward energy dispersion, a larger zonal scale and deeper vertical structure in warmer climates.

The Maradi fault zone: 3-D imagery of a classic wrench fault in Oman

DOE Office of Scientific and Technical Information (OSTI.GOV)

Neuhaus, D.

1993-09-01

The Maradi fault zone extends for almost 350 km in a north-northwest-south-southeast direction from the Oman Mountain foothills into the Arabian Sea, thereby dissecting two prolific hydrocarbon provinces, the Ghaba and Fahud salt basins. During its major Late Cretaceous period of movement, the Maradi fault zone acted as a left-lateral wrench fault. An early exploration campaign based on two-dimensional seismic targeted at fractured Cretaceous carbonates had mixed success and resulted in the discovery of one producing oil field. The structural complexity, rapidly varying carbonate facies, and uncertain fracture distribution prevented further drilling activity. In 1990 a three-dimensional (3-D) seismic surveymore » covering some 500 km[sup 2] was acquired over the transpressional northern part of the Maradi fault zone. The good data quality and the focusing power of 3-D has enabled stunning insight into the complex structural style of a [open quotes]textbook[close quotes] wrench fault, even at deeper levels and below reverse faults hitherto unexplored. Subtle thickness changes within the carbonate reservoir and the unconformably overlying shale seal provided the tool for the identification of possible shoals and depocenters. Horizon attribute maps revealed in detail the various structural components of the wrench assemblage and highlighted areas of increased small-scale faulting/fracturing. The results of four recent exploration wells will be demonstrated and their impact on the interpretation discussed.« less

Pichon Rivière's psychoanalytic contributions: Some comparisons with object relations and modern developments in psychoanalysis.

PubMed

Scharff, David E; Losso, Roberto; Setton, Lea

2017-02-01

Enrique Pichon Rivière's work, fundamental to Latin American and European psychoanalytic development, is largely unknown in English-language psychoanalysis. Pichon's central contribution, the link (el vinculo), describes relational bonds in all dimensions. People are born into, live in, and relate through links. Psychic structure is built of links that then influence external interaction. Links, expressed in mind, body and external action, continuously join internal and external worlds. Links have two axes: vertical axis links connect generations through unconscious transgenerational transmission; horizontal axis links connect persons to life partners, family, community and society. For Pichon, treatment constitutes a spiral process through which interpretation disrupts existent structures, promoting new emergent organizations at successively deeper levels. Psychic and link structures evolve over time unless repetitive cycles stunt growth. For Pichon, transference is constituted in the here-and-now-with-me because of the analytic link. Pichon also undertook family and group psychoanalysis where individuals become spokespersons for unconscious links and family secrets. He developed operative groups that apply psychoanalysis to both analytic and non-analytic tasks. After describing Pichon's major contributions, the paper compares Pichon Rivière's ideas with those of Klein, Fairbairn, Bion, Winnicott and Bowlby, and contemporary writers including Ogden, Kaës, and Ferro whose works echo Pichon Rivière's thought. Copyright © 2016 Institute of Psychoanalysis.

Spatially localized structure-function relations in the elastic properties of sheared articular cartilage

NASA Astrophysics Data System (ADS)

Silverberg, Jesse; Bonassar, Lawrence; Cohen, Itai

2013-03-01

Contemporary developments in therapeutic tissue engineering have been enabled by basic research efforts in the field of biomechanics. Further integration of technology in medicine requires a deeper understanding of the mechanical properties of soft biological materials and the structural origins of their response under extreme stresses and strains. Drawing on the science generated by the ``Extreme Mechanics'' community, we present experimental results on the mechanical properties of articular cartilage, a hierarchically structured soft biomaterial found in the joints of mammalian long bones. Measurements of the spatially localized structure and mechanical properties will be compared with theoretical descriptions based on networks of deformed rods, poro-visco-elasticity, and standard continuum models. Discrepancies between experiment and theory will be highlighted, and suggestions for how models can be improved will be given.

Responses of a 58-story RC dual core shear wall and outrigger frame building inferred from two earthquakes

USGS Publications Warehouse

Çelebi, Mehmet

2016-01-01

Responses of a dual core shear-wall and outrigger-framed 58-story building recorded during the Mw6.0 Napa earthquake of 24 August 2014 and the Mw3.8 Berkeley earthquake of 20 October 2011 are used to identify its dynamic characteristics and behavior. Fundamental frequencies are 0.28 Hz (NS), 0.25 Hz (EW), and 0.43 Hz (torsional). Rigid body motions due to rocking are not significant. Average drift ratios are small. Outrigger frames do not affect average drift ratios or mode shapes. Local site effects do not affect the response; however, response associated with deeper structure may be substantial. A beating effect is observed from data of both earthquakes but beating periods are not consistent. Low critical damping ratios may have contributed to the beating effect. Torsion is relatively larger above outriggers as indicated by the time-histories of motions at the roof, possibly due to the discontinuity of the stiffer shear walls above level 47.

Axial Surface Mapping of Wrinkle Ridges on Solis Planum, Mars from MOLA Topography: Constraints on Subsurface Blind Thrust Geometry

NASA Technical Reports Server (NTRS)

Vidal, A.; Mueller, K.; Golombek, M. P.

2003-01-01

We undertook axial surface mapping of selected wrinkle ridges on Solis Planum, Mars in order to assess the subsurface geometry of blind thrusts proposed to exist beneath them. This work builds on previous work that defined structural families of wrinkle ridges based on their surface morphology in this region. Although a growing consensus exists for models of wrinkle ridge kinematics and mechanics, a number of current problems remain. These include the origin of topographic offset across the edges of wrinkle ridges, the relationship between broad arches and superposed ridges, the origin of smaller wrinkles, and perhaps most importantly, the trajectory of blind thrusts that underlie wrinkle ridges and accommodate shortening at deeper crustal levels. We are particularly interested in defining the depths at which blind thrusts flatten under wrinkle ridges in order to provide constraints on the brittle-ductile transition during Early Hesperian time. We also seek to test whether wrinkle ridges on Solis Planum develop above reactivated faults or newly formed ones.

Problematic effects of antibiotics on anaerobic treatment of swine wastewater.

PubMed

Cheng, D L; Ngo, H H; Guo, W S; Chang, S W; Nguyen, D D; Kumar, S Mathava; Du, B; Wei, Q; Wei, D

2018-05-04

Swine wastewaters with high levels of organic pollutants and antibiotics have become serious environmental concerns. Anaerobic technology is a feasible option for swine wastewater treatment due to its advantage in low costs and bioenergy production. However, antibiotics in swine wastewater have problematic effects on micro-organisms, and the stability and performance of anaerobic processes. Thus, this paper critically reviews impacts of antibiotics on pH, COD removal efficiencies, biogas and methane productions as well as the accumulation of volatile fatty acids (VFAs) in the anaerobic processes. Meanwhile, impacts on the structure of bacteria and methanogens in anaerobic processes are also discussed comprehensively. Furthermore, to better understand the effect of antibiotics on anaerobic processes, detailed information about antimicrobial mechanisms of antibiotics and microbial functions in anaerobic processes is also summarized. Future research on deeper knowledge of the effect of antibiotics on anaerobic processes are suggested to reduce their adverse environmental impacts. Copyright © 2018 Elsevier Ltd. All rights reserved.

TOMOGRAPHY OF PLASMA FLOWS IN THE UPPER SOLAR CONVECTION ZONE USING TIME-DISTANCE INVERSION COMBINING RIDGE AND PHASE-SPEED FILTERING

DOE Office of Scientific and Technical Information (OSTI.GOV)

Svanda, Michal, E-mail: michal@astronomie.cz; Astronomical Institute, Charles University in Prague, Faculty of Mathematics and Physics, V Holesovickach 2, CZ-18000 Prague 8

2013-09-20

The consistency of time-distance inversions for horizontal components of the plasma flow on supergranular scales in the upper solar convection zone is checked by comparing the results derived using two k-{omega} filtering procedures-ridge filtering and phase-speed filtering-commonly used in time-distance helioseismology. I show that both approaches result in similar flow estimates when finite-frequency sensitivity kernels are used. I further demonstrate that the performance of the inversion improves (in terms of a simultaneously better averaging kernel and a lower noise level) when the two approaches are combined together in one inversion. Using the combined inversion, I invert for horizontal flows inmore » the upper 10 Mm of the solar convection zone. The flows connected with supergranulation seem to be coherent only for the top {approx}5 Mm; deeper down there is a hint of change of the convection scales toward structures larger than supergranules.« less

Deeper insight into the structure of the anaerobic digestion microbial community; the biogas microbiome database is expanded with 157 new genomes.

PubMed

Treu, Laura; Kougias, Panagiotis G; Campanaro, Stefano; Bassani, Ilaria; Angelidaki, Irini

2016-09-01

This research aimed to better characterize the biogas microbiome by means of high throughput metagenomic sequencing and to elucidate the core microbial consortium existing in biogas reactors independently from the operational conditions. Assembly of shotgun reads followed by an established binning strategy resulted in the highest, up to now, extraction of microbial genomes involved in biogas producing systems. From the 236 extracted genome bins, it was remarkably found that the vast majority of them could only be characterized at high taxonomic levels. This result confirms that the biogas microbiome is comprised by a consortium of unknown species. A comparative analysis between the genome bins of the current study and those extracted from a previous metagenomic assembly demonstrated a similar phylogenetic distribution of the main taxa. Finally, this analysis led to the identification of a subset of common microbes that could be considered as the core essential group in biogas production. Copyright © 2016 Elsevier Ltd. All rights reserved.

Proteomic Approaches and Identification of Novel Therapeutic Targets for Alcoholism

PubMed Central

Gorini, Giorgio; Adron Harris, R; Dayne Mayfield, R

2014-01-01

Recent studies have shown that gene regulation is far more complex than previously believed and does not completely explain changes at the protein level. Therefore, the direct study of the proteome, considerably different in both complexity and dynamicity to the genome/transcriptome, has provided unique insights to an increasing number of researchers. During the past decade, extraordinary advances in proteomic techniques have changed the way we can analyze the composition, regulation, and function of protein complexes and pathways underlying altered neurobiological conditions. When combined with complementary approaches, these advances provide the contextual information for decoding large data sets into meaningful biologically adaptive processes. Neuroproteomics offers potential breakthroughs in the field of alcohol research by leading to a deeper understanding of how alcohol globally affects protein structure, function, interactions, and networks. The wealth of information gained from these advances can help pinpoint relevant biomarkers for early diagnosis and improved prognosis of alcoholism and identify future pharmacological targets for the treatment of this addiction. PMID:23900301

Immune responses to invasive aspergillosis: new understanding and therapeutic opportunities

PubMed Central

Hohl, Tobias M.

2017-01-01

Purpose of review Invasive aspergillosis is a worldwide disease that primarily affects immune-compromised patients, agricultural workers with corneal abrasions, individuals with structural lung disease, and patients with primary immune deficiency. The critical function of the immune system is to prevent the germination of airborne conidia into tissue-invasive hyphae. This review covers recent advances that shape our understanding of anti-Aspergillus immunity at the molecular and cellular level. Recent findings Host defense against conidia and hyphae occurs via distinct molecular mechanisms that involve intracellular and extracellular killing pathways, as well as cooperation between different myeloid cell subsets. The strength and efficacy of the host response is shaped by the tissue microenvironment. In preclinical models of disease, host immune augmentation strategies have yielded benefits, yet translating these insights into therapeutic strategies in humans remains challenging. Summary Although advances in early diagnostic strategies and in antifungal drugs have ameliorated clinical outcomes of invasive aspergillosis, further improvements depend on gaining deeper insight into and translating advances in anti-Aspergillus immunity. PMID:28509673

Structural face encoding: How task affects the N170's sensitivity to race.

PubMed

Senholzi, Keith B; Ito, Tiffany A

2013-12-01

The N170 event-related potential (ERP) component differentiates faces from non-faces, but studies aimed at investigating whether the processing indexed by this component is also sensitive to racial differences among faces have garnered conflicting results. Here, we explore how task affects the influence of race on the N170 among White participants. N170s were larger to ingroup White faces than outgroup Black faces, but only for those required to attend to race, suggesting that attention to race can result in deeper levels of processing for ingroup members. Conversely, N170s were larger to Black faces than White faces for participants who attended to the unique identity of the faces, suggesting that attention to identity can result in preferential recruitment of cognitive resources for outgroup members. Taken together, these findings suggest that race can differentially impact face processing at early stages of encoding, but differences in processing are contingent upon one's goal state.

Regularities and irregularities in order flow data

NASA Astrophysics Data System (ADS)

Theissen, Martin; Krause, Sebastian M.; Guhr, Thomas

2017-11-01

We identify and analyze statistical regularities and irregularities in the recent order flow of different NASDAQ stocks, focusing on the positions where orders are placed in the order book. This includes limit orders being placed outside of the spread, inside the spread and (effective) market orders. Based on the pairwise comparison of the order flow of different stocks, we perform a clustering of stocks into groups with similar behavior. This is useful to assess systemic aspects of stock price dynamics. We find that limit order placement inside the spread is strongly determined by the dynamics of the spread size. Most orders, however, arrive outside of the spread. While for some stocks order placement on or next to the quotes is dominating, deeper price levels are more important for other stocks. As market orders are usually adjusted to the quote volume, the impact of market orders depends on the order book structure, which we find to be quite diverse among the analyzed stocks as a result of the way limit order placement takes place.

Simplified Models for the Study of Postbuckled Hat-Stiffened Composite Panels

NASA Technical Reports Server (NTRS)

Vescovini, Riccardo; Davila, Carlos G.; Bisagni, Chiara

2012-01-01

The postbuckling response and failure of multistringer stiffened panels is analyzed using models with three levels of approximation. The first model uses a relatively coarse mesh to capture the global postbuckling response of a five-stringer panel. The second model can predict the nonlinear response as well as the debonding and crippling failure mechanisms in a single stringer compression specimen (SSCS). The third model consists of a simplified version of the SSCS that is designed to minimize the computational effort. The simplified model is well-suited to perform sensitivity analyses for studying the phenomena that lead to structural collapse. In particular, the simplified model is used to obtain a deeper understanding of the role played by geometric and material modeling parameters such as mesh size, inter-laminar strength, fracture toughness, and fracture mode mixity. Finally, a global/local damage analysis method is proposed in which a detailed local model is used to scan the global model to identify the locations that are most critical for damage tolerance.

Encapsulation of a Decision-Making Model to Optimize Supplier Selection via Structural Equation Modeling (SEM)

NASA Astrophysics Data System (ADS)

Sahul Hameed, Ruzanna; Thiruchelvam, Sivadass; Nasharuddin Mustapha, Kamal; Che Muda, Zakaria; Mat Husin, Norhayati; Ezanee Rusli, Mohd; Yong, Lee Choon; Ghazali, Azrul; Itam, Zarina; Hakimie, Hazlinda; Beddu, Salmia; Liyana Mohd Kamal, Nur

2016-03-01

This paper proposes a conceptual framework to compare criteria/factor that influence the supplier selection. A mixed methods approach comprising qualitative and quantitative survey will be used. The study intend to identify and define the metrics that key stakeholders at Public Works Department (PWD) believed should be used for supplier. The outcomes would foresee the possible initiatives to bring procurement in PWD to a strategic level. The results will provide a deeper understanding of drivers for supplier’s selection in the construction industry. The obtained output will benefit many parties involved in the supplier selection decision-making. The findings provides useful information and greater understanding of the perceptions that PWD executives hold regarding supplier selection and the extent to which these perceptions are consistent with findings from prior studies. The findings from this paper can be utilized as input for policy makers to outline any changes in the current procurement code of practice in order to enhance the degree of transparency and integrity in decision-making.

Structural interpretation of El Hierro (Canary Islands) rifts system from gravity inversion modelling

NASA Astrophysics Data System (ADS)

Sainz-Maza, S.; Montesinos, F. G.; Martí, J.; Arnoso, J.; Calvo, M.; Borreguero, A.

2017-08-01

Recent volcanism in El Hierro Island is mostly concentrated along three elongated and narrow zones which converge at the center of the island. These zones with extensive volcanism have been identified as rift zones. The presence of similar structures is common in many volcanic oceanic islands, so understanding their origin, dynamics and structure is important to conduct hazard assessment in such environments. There is still not consensus on the origin of the El Hierro rift zones, having been associated with mantle uplift or interpreted as resulting from gravitational spreading and flank instability. To further understand the internal structure and origin of the El Hierro rift systems, starting from the previous gravity studies, we developed a new 3D gravity inversion model for its shallower layers, gathering a detailed picture of this part of the island, which has permitted a new interpretation about these rifts. Previous models already identified a main central magma accumulation zone and several shallower high density bodies. The new model allows a better resolution of the pathways that connect both levels and the surface. Our results do not point to any correspondence between the upper parts of these pathways and the rift identified at the surface. Non-clear evidence of progression toward deeper parts into the volcanic system is shown, so we interpret them as very shallow structures, probably originated by local extensional stresses derived from gravitational loading and flank instability, which are used to facilitate the lateral transport of magma when it arrives close to the surface.

K-shuff: A Novel Algorithm for Characterizing Structural and Compositional Diversity in Gene Libraries

PubMed Central

Jangid, Kamlesh; Kao, Ming-Hung; Lahamge, Aishwarya; Williams, Mark A.; Rathbun, Stephen L.; Whitman, William B.

2016-01-01

K-shuff is a new algorithm for comparing the similarity of gene sequence libraries, providing measures of the structural and compositional diversity as well as the significance of the differences between these measures. Inspired by Ripley’s K-function for spatial point pattern analysis, the Intra K-function or IKF measures the structural diversity, including both the richness and overall similarity of the sequences, within a library. The Cross K-function or CKF measures the compositional diversity between gene libraries, reflecting both the number of OTUs shared as well as the overall similarity in OTUs. A Monte Carlo testing procedure then enables statistical evaluation of both the structural and compositional diversity between gene libraries. For 16S rRNA gene libraries from complex bacterial communities such as those found in seawater, salt marsh sediments, and soils, K-shuff yields reproducible estimates of structural and compositional diversity with libraries greater than 50 sequences. Similarly, for pyrosequencing libraries generated from a glacial retreat chronosequence and Illumina® libraries generated from US homes, K-shuff required >300 and 100 sequences per sample, respectively. Power analyses demonstrated that K-shuff is sensitive to small differences in Sanger or Illumina® libraries. This extra sensitivity of K-shuff enabled examination of compositional differences at much deeper taxonomic levels, such as within abundant OTUs. This is especially useful when comparing communities that are compositionally very similar but functionally different. K-shuff will therefore prove beneficial for conventional microbiome analysis as well as specific hypothesis testing. PMID:27911946

Seismic interpretation of the deep structure of the Wabash Valley Fault System

USGS Publications Warehouse

Bear, G.W.; Rupp, J.A.; Rudman, A.J.

1997-01-01

Interpretations of newly available seismic reflection profiles near the center of the Illinois Basin indicate that the Wabash Valley Fault System is rooted in a series of basement-penetrating faults. The fault system is composed predominantly of north-northeast-trending high-angle normal faults. The largest faults in the system bound the 22-km wide 40-km long Grayville Graben. Structure contour maps drawn on the base of the Mount Simon Sandstone (Cambrian System) and a deeper pre-Mount Simon horizon show dip-slip displacements totaling at least 600 meters across the New Harmony fault. In contrast to previous interpretations, the N-S extent of significant fault offsets is restricted to a region north of 38?? latitude and south of 38.35?? latitude. This suggests that the graben is not a NE extension of the structural complex composed of the Rough Creek Fault System and the Reelfoot Rift as previously interpreted. Structural complexity on the graben floor also decreases to the south. Structural trends north of 38?? latitude are offset laterally across several large faults, indicating strike-slip motions of 2 to 4 km. Some of the major faults are interpreted to penetrate to depths of 7 km or more. Correlation of these faults with steep potential field gradients suggests that the fault positions are controlled by major lithologic contacts within the basement and that the faults may extend into the depth range where earthquakes are generated, revealing a potential link between specific faults and recently observed low-level seismicity in the area.

Signal Transduction in Histidine Kinases: Insights from New Structures

PubMed Central

Bhate, Manasi P.; Molnar, Kathleen S.; Goulian, Mark; DeGrado, William F.

2015-01-01

Histidine kinases (HKs) are major players in bacterial signaling. There has been an explosion of new HK crystal structures in the last five years. We globally analyze the structures of HKs to yield insights into the mechanisms by which signals are transmitted to and across protein structures in this family. We interpret known enzymological data in the context of new structural data to show how asymmetry across the dimer interface is a key feature of signal transduction in HKs, and discuss how different HK domains undergo asymmetric-to-symmetric transitions during signal transduction and catalysis. A thermodynamic framework for signaling that encompasses these various properties is presented and the consequences of weak thermodynamic coupling are discussed. The synthesis of observations from enzymology, structural biology, protein engineering and thermodynamics paves the way for a deeper molecular understanding of histidine kinase signal transduction. PMID:25982528

Exploring the bulk in AdS /CFT : A covariant approach

NASA Astrophysics Data System (ADS)

Engelhardt, Netta

2017-03-01

I propose a general, covariant way of defining when one region is "deeper in the bulk" than another. This definition is formulated outside of an event horizon (or in the absence thereof) in generic geometries; it may be applied to both points and surfaces, and it may be used to compare the depth of bulk points or surfaces relative to a particular boundary subregion or relative to the entire boundary. Using the recently proposed "light-cone cut" formalism, the comparative depth between two bulk points can be determined from the singularity structure of Lorentzian correlators in the dual field theory. I prove that, by this definition, causal wedges of progressively larger regions probe monotonically deeper in the bulk. The definition furthermore matches expectations in pure AdS and in static AdS black holes with isotropic spatial slices, where a well-defined holographic coordinate exists. In terms of holographic renormalization group flow, this new definition of bulk depth makes contact with coarse graining over both large distances and long time scales.

Interpreting Quantifier Scope Ambiguity: Evidence of Heuristic First, Algorithmic Second Processing

PubMed Central

Dwivedi, Veena D.

2013-01-01

The present work suggests that sentence processing requires both heuristic and algorithmic processing streams, where the heuristic processing strategy precedes the algorithmic phase. This conclusion is based on three self-paced reading experiments in which the processing of two-sentence discourses was investigated, where context sentences exhibited quantifier scope ambiguity. Experiment 1 demonstrates that such sentences are processed in a shallow manner. Experiment 2 uses the same stimuli as Experiment 1 but adds questions to ensure deeper processing. Results indicate that reading times are consistent with a lexical-pragmatic interpretation of number associated with context sentences, but responses to questions are consistent with the algorithmic computation of quantifier scope. Experiment 3 shows the same pattern of results as Experiment 2, despite using stimuli with different lexical-pragmatic biases. These effects suggest that language processing can be superficial, and that deeper processing, which is sensitive to structure, only occurs if required. Implications for recent studies of quantifier scope ambiguity are discussed. PMID:24278439

Invariant measures in brain dynamics

NASA Astrophysics Data System (ADS)

Boyarsky, Abraham; Góra, Paweł

2006-10-01

This note concerns brain activity at the level of neural ensembles and uses ideas from ergodic dynamical systems to model and characterize chaotic patterns among these ensembles during conscious mental activity. Central to our model is the definition of a space of neural ensembles and the assumption of discrete time ensemble dynamics. We argue that continuous invariant measures draw the attention of deeper brain processes, engendering emergent properties such as consciousness. Invariant measures supported on a finite set of ensembles reflect periodic behavior, whereas the existence of continuous invariant measures reflect the dynamics of nonrepeating ensemble patterns that elicit the interest of deeper mental processes. We shall consider two different ways to achieve continuous invariant measures on the space of neural ensembles: (1) via quantum jitters, and (2) via sensory input accompanied by inner thought processes which engender a “folding” property on the space of ensembles.

An experiment teaching method based on the Optisystem simulation platform

NASA Astrophysics Data System (ADS)

Zhu, Jihua; Xiao, Xuanlu; Luo, Yuan

2017-08-01

The experiment teaching of optical communication system is difficult to achieve because of expensive equipment. The Optisystem is optical communication system design software, being able to provide such a simulation platform. According to the characteristic of the OptiSystem, an approach of experiment teaching is put forward in this paper. It includes three gradual levels, the basics, the deeper looks and the practices. Firstly, the basics introduce a brief overview of the technology, then the deeper looks include demoes and example analyses, lastly the practices are going on through the team seminars and comments. A variety of teaching forms are implemented in class. The fact proves that this method can not only make up the laboratory but also motivate the students' learning interest and improve their practical abilities, cooperation abilities and creative spirits. On the whole, it greatly raises the teaching effect.

A Geothermal GIS for Nevada: Defining Regional Controls and Favorable Exploration Terrains for Extensional Geothermal Systems

USGS Publications Warehouse

Coolbaugh, M.F.; Taranik, J.V.; Raines, G.L.; Shevenell, L.A.; Sawatzky, D.L.; Bedell, R.; Minor, T.B.

2002-01-01

Spatial analysis with a GIS was used to evaluate geothermal systems in Nevada using digital maps of geology, heat flow, young faults, young volcanism, depth to groundwater, groundwater geochemistry, earthquakes, and gravity. High-temperature (>160??C) extensional geothermal systems are preferentially associated with northeast-striking late Pleistocene and younger faults, caused by crustal extension, which in most of Nevada is currently oriented northwesterly (as measured by GPS). The distribution of sparse young (160??C) geothermal systems in Nevada are more likely to occur in areas where the groundwater table is shallow (<30m). Undiscovered geothermal systems may occur where groundwater levels are deeper and hot springs do not issue at the surface. A logistic regression exploration model was developed for geothermal systems, using young faults, young volcanics, positive gravity anomalies, and earthquakes to predict areas where deeper groundwater tables are most likely to conceal geothermal systems.

Live Cell Imaging of Butterfly Pupal and Larval Wings In Vivo

PubMed Central

Ohno, Yoshikazu; Otaki, Joji M.

2015-01-01

Butterfly wing color patterns are determined during the late larval and early pupal stages. Characterization of wing epithelial cells at these stages is thus critical to understand how wing structures, including color patterns, are determined. Previously, we successfully recorded real-time in vivo images of developing butterfly wings over time at the tissue level. In this study, we employed similar in vivo fluorescent imaging techniques to visualize developing wing epithelial cells in the late larval and early pupal stages 1 hour post-pupation. Both larval and pupal epithelial cells were rich in mitochondria and intracellular networks of endoplasmic reticulum, suggesting high metabolic activities, likely in preparation for cellular division, polyploidization, and differentiation. Larval epithelial cells in the wing imaginal disk were relatively large horizontally and tightly packed, whereas pupal epithelial cells were smaller and relatively loosely packed. Furthermore, larval cells were flat, whereas pupal cells were vertically elongated as deep as 130 μm. In pupal cells, many endosome-like or autophagosome-like structures were present in the cellular periphery down to approximately 10 μm in depth, and extensive epidermal feet or filopodia-like processes were observed a few micrometers deep from the cellular surface. Cells were clustered or bundled from approximately 50 μm in depth to deeper levels. From 60 μm to 80 μm in depth, horizontal connections between these clusters were observed. The prospective eyespot and marginal focus areas were resistant to fluorescent dyes, likely because of their non-flat cone-like structures with a relatively thick cuticle. These in vivo images provide important information with which to understand processes of epithelial cell differentiation and color pattern determination in butterfly wings. PMID:26107809

Live Cell Imaging of Butterfly Pupal and Larval Wings In Vivo.

PubMed

Ohno, Yoshikazu; Otaki, Joji M

2015-01-01

Butterfly wing color patterns are determined during the late larval and early pupal stages. Characterization of wing epithelial cells at these stages is thus critical to understand how wing structures, including color patterns, are determined. Previously, we successfully recorded real-time in vivo images of developing butterfly wings over time at the tissue level. In this study, we employed similar in vivo fluorescent imaging techniques to visualize developing wing epithelial cells in the late larval and early pupal stages 1 hour post-pupation. Both larval and pupal epithelial cells were rich in mitochondria and intracellular networks of endoplasmic reticulum, suggesting high metabolic activities, likely in preparation for cellular division, polyploidization, and differentiation. Larval epithelial cells in the wing imaginal disk were relatively large horizontally and tightly packed, whereas pupal epithelial cells were smaller and relatively loosely packed. Furthermore, larval cells were flat, whereas pupal cells were vertically elongated as deep as 130 μm. In pupal cells, many endosome-like or autophagosome-like structures were present in the cellular periphery down to approximately 10 μm in depth, and extensive epidermal feet or filopodia-like processes were observed a few micrometers deep from the cellular surface. Cells were clustered or bundled from approximately 50 μm in depth to deeper levels. From 60 μm to 80 μm in depth, horizontal connections between these clusters were observed. The prospective eyespot and marginal focus areas were resistant to fluorescent dyes, likely because of their non-flat cone-like structures with a relatively thick cuticle. These in vivo images provide important information with which to understand processes of epithelial cell differentiation and color pattern determination in butterfly wings.

Source inversion analysis of the 2011 Tohoku-Oki earthquake using Green's functions calculated from a 3-D heterogeneous structure model

NASA Astrophysics Data System (ADS)

Suzuki, W.; Aoi, S.; Maeda, T.; Sekiguchi, H.; Kunugi, T.

2013-12-01

Source inversion analysis using near-source strong-motion records with an assumption of 1-D underground structure models has revealed the overall characteristics of the rupture process of the 2011 Tohoku-Oki mega-thrust earthquake. This assumption for the structure model is acceptable because the seismic waves radiated during the Tohoku-Oki event were rich in the very-low-frequency contents lower than 0.05 Hz, which are less affected by the small-scale heterogeneous structure. The analysis using more reliable Green's functions even in the higher-frequency range considering complex structure of the subduction zone will illuminate more detailed rupture process in space and time and the transition of the frequency dependence of the wave radiation for the Tohoku-Oki earthquake. In this study, we calculate the near-source Green's functions using a 3-D underground structure model and perform the source inversion analysis using them. The 3-D underground structure model used in this study is the Japan Integrated Velocity Structure Model (Headquarters for Earthquake Research Promotion, 2012). A curved fault model on the Pacific plate interface is discretized into 287 subfaults at ~20 km interval. The Green's functions are calculated using GMS (Aoi et al., 2004), which is a simulation program package for the seismic wave field by the finite difference method using discontinuous grids (Aoi and Fujiwara, 1999). Computational region is 136-146.2E in longitude, 34-41.6N in latitude, and 0-100 km in depth. The horizontal and vertical grid intervals are 200 m and 100 m, respectively, for the shallower region and those for the deeper region are tripled. The number of the total grids is 2.1 billion. We derive 300-s records by calculating 36,000 steps with a time interval of 0.0083 second (120 Hz sampling). It takes nearly one hour to compute one case using 48 Graphics Processing Units (GPU) on TSUBAME2.0 supercomputer owned by Tokyo Institute of Technology. In total, 574 cases are calculated to derive the Green's functions for two basis slip angles from each subfault. A preliminary inversion result using the same frequency band and strong-motion stations as those for our previous studies (Suzuki et al., 2011; 2013) shows that, in addition to a large slip in the shallower area, a slip in the deeper part is relatively larger than the previous result, for the off Miyagi region. Characteristics of the temporal rupture progression are consistent with the previous studies. Our further study will consider the rupture propagation inside subfault, which would more appropriately evaluate the slip amount of the deeper area related to the rupture propagating landward. Improvement of waveform alignment is also necessary to reduce the influence of the discrepancy and uncertainty of the underground structure models used for the hypocenter determination and Green's function calculation. Acknowledgements: This research is partially supported by "Joint Usage/Research Center for Interdisciplinary Large-scale Information Infrastructures" and "High Performance Computing Infrastructure" in Japan.

The volcano-sedimentary succession of Upper Permian in Wuli area, central Qinghai-Tibetan Plateau: Sedimentology, geochemistry and paleogeography

NASA Astrophysics Data System (ADS)

Liu, Shengqian; Jiang, Zaixing; Gao, Yi

2017-04-01

Detailed observations on cores and thin sections well documented a volcano-sedimentary succession from Well TK2, which is located in Wuli area, central Qinghai-Tibetan Plateau. The TK2 volcano-sedimentary succession reflects an active sedimentary-tectonic setting in the north margin of North Qiangtang-Chamdo terrane in the late Permian epoch. Based on the observation and recognition on lithology and mineralogy, the components of TK2 succession are mainly volcanic and volcaniclastic rocks and four main lithofacies are recognized, including massive volcanic lithofacies (LF1), pyroclastic tuff lithofacies (LF2), tuffaceous sandstone lithofacies (LF3) and mudstone lithofacies (LF4). LF1 is characterized by felsic components, massive structure and porphyrotopic structure with local flow structure, which indicates submarine intrusive domes or extrusion-fed lavas that formed by magma ascents via faults or dykes. Meanwhile, its eruption style may reflect a relative high pressure compensation level (PCL) that mainly determined by water depth, which implies a deep-water environment. LF2 is composed of volcanic lapilli or ash and featured with massive structure, parallel bedding and various deformed laminations including convolve structure, slide deformation, ball-and-pillow structure, etc.. LF2 indicates the sedimentation of initial or reworked explosive products not far away from volcano centers, reflecting the proximal accumulation of volcano eruption-fed clasts or their resedimentation as debris flows. In addition, the submarine volcano eruptions may induced earthquakes that facilitate the resedimentation of unconsolidated sediments. LF3 contains abundant pyroclastic components and is commonly massive with rip-up mudstone clasts or usually interbedded with LF4. In addition, typical flute casts, scour structures and graded beddings in thin-interbedded layers of sandstone and mudstone are commonly observed, which also represents the sedimentation of debris flows or turbidity flows in a relative deep-water environment. LF4 indicates suspension deposits of distal turbidity sediments in deeper-water setting, which is mainly tuffaceous and ordinary mudstone, commonly interbedded with thin pyroclastic layers. Geochemically, the felsic volcanic rocks belong to tholeiitic to calc-alkaline series, exhibiting characteristics of right-leaning rare earth element (REE) patterns with conspicuous Eu negative anomalies, enrichments in large ion lithophile elements (LILEs) and depletions in high field-strength elements (HFSEs), which reflect an island arc environment that corresponds to the late-Permian subduction of slabs. The TK2 volcanic-sedimentary succession reveals a submarine volcano-dominated depositional model and proves the existence of a deeper water environment, at least in a restricted zone of Wuli area. However, the traditional sedimentary and paleogeographic knowledges are mostly about coal-forming transitional facies in stable environment. Therefore, the proposing of a deep-water volcano-sedimentary model will provide a further comprehension of paleogeography in southern Qinghai at late-Permian, which will also supplement the previous cognition of stable ocean-land transitional environments and provide a new sight to the paleogeographic framework of late-Permian in North Qiangtang-Chamdo terrane.

Temperature Inversions and Nighttime Convection in the Martian Tropics

NASA Astrophysics Data System (ADS)

Hinson, D. P.; Spiga, A.; Lewis, S.; Tellmann, S.; Paetzold, M.; Asmar, S. W.; Häusler, B.

2013-12-01

We are using radio occultation measurements from Mars Express, Mars Reconnaissance Orbiter, and Mars Global Surveyor to characterize the diurnal cycle in the lowest scale height above the surface. We focus on northern spring and summer, using observations from 4 Martian years at local times of 4-5 and 15-17 h. We supplement the observations with results obtained from large-eddy simulations and through data assimilation by the UK spectral version of the LMD Mars Global Circulation Model. We previously investigated the depth of the daytime convective boundary layer (CBL) and its variations with surface elevation and surface properties. We are now examining unusual aspects of the temperature structure observed at night. Most important, predawn profiles in the Tharsis region contain an unexpected layer of neutral static stability at pressures of 200-300 Pa with a depth of 4-5 km. The mixed layer is bounded above by a midlevel temperature inversion and below by another strong inversion adjacent to the surface. The sharp temperature minimum at the base of the midlevel inversion suggests the presence of a thin water ice cloud layer, with the further implication that radiative cooling at cloud level can induce convective activity at lower altitudes. Conversely, nighttime profiles in Amazonis show no sign of a midlevel inversion or a detached mixed layer. These regional variations in the nighttime temperature structure appear to arise in part from large-scale variations in topography, which have several notable effects. First, the CBL is much deeper in the Tharsis region than in Amazonis, owing to a roughly 6-km difference in surface elevation. Second, large-eddy simulations show that daytime convection is not only deeper above Tharsis but also considerably more intense than it is in Amazonis. Finally, the daytime surface temperatures are comparable in the two regions, so that Tharsis acts as an elevated heat source throughout the CBL. These topographic effects are expected to enhance the vertical mixing of water vapor above elevated terrain, which might lead to the formation and regional confinement of nighttime clouds.

Crustal deformation of the Andean foreland at 31° 30‧S (Argentina) constrained by magnetotelluric survey

NASA Astrophysics Data System (ADS)

Orozco, Luz Amparo; Favetto, Alicia; Pomposiello, Cristina; Rossello, Eduardo; Booker, John

2013-01-01

Twenty-five new long-period magnetotelluric sites near 31.5°S were collected in a west-east profile. This profile and the previous one, aligned with and adjacent to the eastern end, have been merged to form a single profile of more than 700 km long, extending from the Precordillera to the Chaco-Pampean Plain. The geotectonic scenario is characterized by a modern flat subduction zone of the Nazca plate located at a depth of around 120 km and clearly defined by the distribution of earthquake hypocenters recorded by local and regional networks. A "bulge" shape at 68.5°W, with an anomalous dip to the west, is observed within this segment. The smooth slab deformation might result from the restriction on eastward motion due to the presence of an electrically resistive zone. The magnetotelluric model shows that this thick zone of increased resistivity is found from shallow crustal levels to upper mantle depths. The bulge geometry allows hot fluids and volatiles to rise from the deeper asthenospheric wedge, and reach the lower crust reducing its viscosity and letting it flow. The zones of low resistivity in the lower crust show spatial correlation with the areas of foreland deformation from Precordillera to the Sierras Pampeanas and may also suggest a ductile regime. Shear zones reactivated by Cenozoic faulting must necessarily have their roots in the levels of the ductile lower crust associated to conductive channels. The zone where the lower crust is closer to the surface coincides with the areas of greatest structural relief and erosion. The interface between the folded ductile lower crust and the brittle upper crust might act as the main level of décollement of the bordering structures between the Precordillera, Sierra de Pie de Palo and the Sierras Pampeanas. In addition, the geometry of the interface might be conditioning the vergence of those structures.

Thermal history and differential exhumation across the Eastern Musgrave Province, South Australia: Insights from low-temperature thermochronology

NASA Astrophysics Data System (ADS)

Glorie, Stijn; Agostino, Kate; Dutch, Rian; Pawley, Mark; Hall, James; Danišík, Martin; Evans, Noreen J.; Collins, Alan S.

2017-04-01

Multi-method geo- and thermochronological data obtained for Palaeo- and Mesoproterozoic granitoids traversing the main structural architecture of the eastern Musgrave Province within South Australia reveal multiphase cooling histories. Apatite U-Pb dating on six samples yield consistent ages of 1075-1025 Ma, suggesting a thermal reset coinciding with mantle-derived magmatism of the greater Warakurna Large Igneous Province ( 1080-1040 Ma). Apatite fission track (AFT) analysis indicate that four discrete thermal events affected the study area, inducing cooling through the AFT partial annealing zone ( 60-120 °C), supported by apatite and zircon (U-Th-Sm)/He data. Late Neoproterozoic cooling from deep crustal levels to temperatures < 200 °C was discerned, which is thought to be related to exhumation and denudation during the Petermann Orogeny. Subsequent cooling events at 450-400 Ma (Silurian-Devonian) and 310-290 Ma (Late Carboniferous) are interpreted to represent exhumation associated with the Alice Springs Orogeny. The latter event exhumed the sampled plutons to shallow crustal depths. An additional Triassic - early Jurassic thermal event, likely recording elevated geothermal gradients at that time, was observed throughout the study area, however, more data is needed to further support this interpretation. The high sample density across the structural architecture of the study area furthermore reveals patterns of fault reactivation and resulting differential exhumation, indicating shallower exhumation levels in the centre and deeper exhumation towards the margins of the sampled transect. The observed differential exhumation patterns match with existing seismic data and fit a model of an inverted graben system for the Phanerozoic evolution of the eastern Musgraves. The results highlight a complex Phanerozoic thermal history for the eastern Musgraves and help to elucidate the poorly appreciated tectonic evolution of inland Australia. This study further demonstrates how high-density sample transects across structural architecture can assess the relative crustal level and associated preservation of the thermal history record within fault-reactivated terranes.

Evaluation of penetration depth of 2% chlorhexidine digluconate into root dentinal tubules using confocal laser scanning microscope.

PubMed

Vadhana, Sekar; Latha, Jothi; Velmurugan, Natanasabapathy

2015-05-01

This study evaluated the penetration depth of 2% chlorhexidine digluconate (CHX) into root dentinal tubules and the influence of passive ultrasonic irrigation (PUI) using a confocal laser scanning microscope (CLSM). Twenty freshly extracted anterior teeth were decoronated and instrumented using Mtwo rotary files up to size 40, 4% taper. The samples were randomly divided into two groups (n = 10), that is, conventional syringe irrigation (CSI) and PUI. CHX was mixed with Rhodamine B dye and was used as the final irrigant. The teeth were sectioned at coronal, middle and apical levels and viewed under CLSM to record the penetration depth of CHX. The data were statistically analyzed using Kruskal-Wallis and Mann-Whitney U tests. The mean penetration depths of 2% CHX in coronal, middle and apical thirds were 138 µm, 80 µm and 44 µm in CSI group, respectively, whereas the mean penetration depths were 209 µm, 138 µm and 72 µm respectively in PUI group. Statistically significant difference was present between CSI group and PUI group at all three levels (p < 0.01 for coronal third and p < 0.001 for middle and apical thirds). On intragroup analysis, both groups showed statistically significant difference among three levels (p < 0.001). Penetration depth of 2% CHX into root dentinal tubules is deeper in coronal third when compared to middle and apical third. PUI aided in deeper penetration of 2% CHX into dentinal tubules when compared to conventional syringe irrigation at all three levels.

Frozen section analysis of margins for head and neck tumor resections: reduction of sampling errors with a third histologic level.

PubMed

Olson, Stephen M; Hussaini, Mohammad; Lewis, James S

2011-05-01

Frozen section analysis is an essential tool for assessing margins intra-operatively to assure complete resection. Many institutions evaluate surgical defect edge tissue provided by the surgeon after the main lesion has been removed. With the increasing use of transoral laser microsurgery, this method is becoming even more prevalent. We sought to evaluate error rates at our large academic institution and to see if sampling errors could be reduced by the simple method change of taking an additional third section on these specimens. All head and neck tumor resection cases from January 2005 through August 2008 with margins evaluated by frozen section were identified by database search. These cases were analyzed by cutting two levels during frozen section and a third permanent section later. All resection cases from August 2008 through July 2009 were identified as well. These were analyzed by cutting three levels during frozen section (the third a 'much deeper' level) and a fourth permanent section later. Error rates for both of these periods were determined. Errors were separated into sampling and interpretation types. There were 4976 total frozen section specimens from 848 patients. The overall error rate was 2.4% for all frozen sections where just two levels were evaluated and was 2.5% when three levels were evaluated (P=0.67). The sampling error rate was 1.6% for two-level sectioning and 1.2% for three-level sectioning (P=0.42). However, when considering only the frozen section cases where tumor was ultimately identified (either at the time of frozen section or on permanent sections) the sampling error rate for two-level sectioning was 15.3 versus 7.4% for three-level sectioning. This difference was statistically significant (P=0.006). Cutting a single additional 'deeper' level at the time of frozen section identifies more tumor-bearing specimens and may reduce the number of sampling errors.

Reproducible nucleation sites for flux dendrites in MgB 2

NASA Astrophysics Data System (ADS)

Johansen, T. H.; Shantsev, D. V.; Olsen, Å. A. F.; Roussel, M.; Pan, A. V.; Dou, S. X.

2007-12-01

Magneto-optical imaging was used to study dendritic flux penetration in films of MgB 2. By repeating experiments under the same external conditions, reproducible features were seen in the pattern formation; dendrites tend to nucleate from fixed locations along the edge. However, their detailed structure deeper inside the film is never reproduced. The reproducibility in nucleation sites is explained as a result of edge roughness causing field hot spots.

Digging deeper on "deep" learning: A computational ecology approach.

PubMed

Buscema, Massimo; Sacco, Pier Luigi

2017-01-01

We propose an alternative approach to "deep" learning that is based on computational ecologies of structurally diverse artificial neural networks, and on dynamic associative memory responses to stimuli. Rather than focusing on massive computation of many different examples of a single situation, we opt for model-based learning and adaptive flexibility. Cross-fertilization of learning processes across multiple domains is the fundamental feature of human intelligence that must inform "new" artificial intelligence.

Playing Games: Do Game Consoles Have a Positive Impact on Girls' Learning Outcomes and Motivation?

ERIC Educational Resources Information Center

Kitching, Lucy; Wheeler, Steve

2013-01-01

Games based learning is currently a hotly debated topic in education and is a fertile field of study (Holmes, 2011; Abrams, 2009). Many schools are exploring ways in which games can be embedded into the curriculum, to enhance learning through deeper engagement and higher levels of motivation (Miller & Robertson, 2010). This paper explores the…

An Exploratory Study of Students' Weekly Stress Levels and Sources of Stress during the Semester

ERIC Educational Resources Information Center

Pitt, Adele; Oprescu, Florin; Tapia, Geraldine; Gray, Marion

2018-01-01

Studying at university can be a very stressful experience. Although the literature provides some information regarding different sources of stress among students, studies have not addressed the issue of changes over the course progression. This study aimed to obtain a deeper understanding of the sources of stress for first-year students and…

Toward a Deeper Understanding of Student Interest or Lack of Interest in Science

ERIC Educational Resources Information Center

Yang, Li-Hsuan

2010-01-01

This study examined the nature of college students' interest or lack of interest in science and the factors to which they attributed their interest or lack of interest. Twenty-four college students were interviewed to gain an understanding of their ideas and experiences of science; their overall interest in science; their interest levels in four…

What Is Happening in the Use of ICT Mathematics to Support Young Adolescent Learners? A New Zealand Experience

ERIC Educational Resources Information Center

Nicholas, Karen; Fletcher, Jo

2017-01-01

Advances in learning approaches can enhance deeper levels of mathematical thinking and engagement through the use of new digital environments and technologies. The growing utilisation of portable digital devices in schools has meant there are enhanced tools to support mathematical learning and understandings. This article focused on those who work…

Contemplative Studies: Prospects for a New Field

ERIC Educational Resources Information Center

Roth, Harold D.

2006-01-01

We have reached a moment in history when it is time to reenvision certain basic aspects of the existing models of teaching and research in higher education in order to foster a deeper knowledge of the nature of our existence as human beings in a world that is intricately interrelated on many levels. This article suggests that one way to accomplish…

Network Update: Plug-Ins, Forms and All That Java.

ERIC Educational Resources Information Center

Higgins, Chris

1997-01-01

Notes that the desire to make World Wide Web (WWW) pages more interactive and laden with animation, sound, and video brings us to the threshold of the deeper levels of Web page creation. Lists and discusses resources available on the WWW that will aid in learning and using these dynamic functions for Web page development to assist in interactive…

When Law Students Read Multiple Documents about Global Warming: Examining the Role of Topic-Specific Beliefs about the Nature of Knowledge and Knowing

ERIC Educational Resources Information Center

Braten, Ivar; Stromso, Helge I.

2010-01-01

In this study, law students (n = 49) read multiple authentic documents presenting conflicting information on the topic of climate change and responded to verification tasks assessing their superficial as well as their deeper-level within- and across-documents comprehension. Hierarchical multiple regression analyses showed that even after variance…

Examining the Relationship between Secondary Mathematics Teachers' Self-Efficacy, Attitudes, and Use of Technology to Support Communication and Mathematics Literacy

ERIC Educational Resources Information Center

Letwinsky, Karim Medico

2017-01-01

The rich language surrounding mathematical concepts often is reduced in many classrooms to a narrow process of memorizing isolated procedures with little context. This approach has proven to be detrimental to students' ability to understand mathematics at deeper levels and remain engaged with this content. The current generation of students values…

The Effect of Self Reflections through Electronic Journals (E-Journals) on the Self Efficacy of Pre-Service Teachers

ERIC Educational Resources Information Center

Tavýl, Zekiye Müge

2014-01-01

This study aims both to provide information about the self-reflections of pre-service teachers keeping self-reflective e-journals during the practicum period and to determine the relationship between their self-reflection and self-efficacy levels. Both quantitative and qualitative data were analysed in integration to gain deeper insight into the…

"Flipping" Lessons in a Multi-Section Spanish Course: Implications for Assigning Explicit Grammar Instruction Outside of the Classroom

ERIC Educational Resources Information Center

Moranski, Kara; Kim, Frederic

2016-01-01

Flipped or inverted classroom (IC) models are promising for foreign language instruction in that they appear to promote well-regarded practices that bridge both sociocultural and cognitive theoretical frameworks, such as allowing for higher degrees of learner agency and facilitating deeper levels of processing. To date, the majority of work on IC…

"Awakening to" an Aspect in the Other: On Developing Insights and Concepts in Qualitative Research

ERIC Educational Resources Information Center

Witz, Klaus G.

2007-01-01

This article discusses "awakening to" deeper aspects in a person and "articulating" them and contrasts this way of developing concepts and new understandings in qualitative research with "fashioning concepts at a level of words and phrases in an arena of public discourse." "Awakening to and articulating" may be epistemologically based on C. H.…

Assessment of airborne environmental bacteria and related factors in 25 underground railway stations in Seoul, Korea

NASA Astrophysics Data System (ADS)

Hwang, Sung Ho; Yoon, Chung Sik; Ryu, Kyong Nam; Paik, Samuel Y.; Cho, Jun Ho

2010-05-01

This study assessed bacterial concentrations in indoor air at 25 underground railway stations in Seoul, Korea, and investigated various related factors including the presence of platform screen doors (PSD), depth of the station, year of construction, temperature, relative humidity, and number of passengers. A total of 72 aerosol samples were collected from all the stations. Concentrations of total airborne bacteria (TAB) ranged from not detected (ND) to 4997 CFU m -3, with an overall geometric mean (GM) of 191 CFU m -3. Airborne bacteria were detected at 23 stations (92%) and Gram-negative bacteria (GNB) were detected at two stations (8%). TAB concentrations of four stations (16%) exceeded 800 CFU m -3, the Korea indoor bio-aerosol guideline. The results of the study showed that TAB concentrations at the stations without PSD showed higher TAB concentrations than those with PSD, though not at statistically significant levels. TAB concentrations of deeper stations revealed significantly higher levels than those of shallower stations. Based on this study, it is recommended that mitigation measures be applied to improve the indoor air quality (IAQ) of underground railway stations in Seoul, with focused attention on deeper stations.

Fish depth distributions in the Lower Mississippi River

USGS Publications Warehouse

Killgore, K. J.; Miranda, Leandro E.

2014-01-01

A substantial body of literature exists about depth distribution of fish in oceans, lakes and reservoirs, but less is known about fish depth distribution in large rivers. Most of the emphasis on fish distributions in rivers has focused on longitudinal and latitudinal spatial distributions. Knowledge on depth distribution is necessary to understand species and community habitat needs. Considering this void, our goal was to identify patterns in fish benthic distribution along depth gradients in the Lower Mississippi River. Fish were collected over 14 years in depths down to 27 m. Fish exhibited non-random depth distributions that varied seasonally and according to species. Species richness was highest in shallow water, with about 50% of the 62 species detected no longer collected in water deeper than 8 m and about 75% no longer collected in water deeper than 12 m. Although richness was highest in shallow water, most species were not restricted to shallow water. Rather, most species used a wide range of depths. A weak depth zonation occurred, not as strong as that reported for deep oceans and lakes. Larger fish tended to occur in deeper water during the high-water period of an annual cycle, but no correlation was evident during the low-water period. The advent of landscape ecology has guided river research to search for spatial patterns along the length of the river and associated floodplains. Our results suggest that fish assemblages in large rivers are also structured vertically. 

Relationship between the Cascadia fore-arc mantle wedge, nonvolcanic tremor, and the downdip limit of seismogenic rupture

USGS Publications Warehouse

McCrory, Patricia A.; Hyndman, Roy D.; Blair, James Luke

2014-01-01

Great earthquakes anticipated on the Cascadia subduction fault can potentially rupture beyond the geodetically and thermally inferred locked zone to the depths of episodic tremor and slip (ETS) or to the even deeper fore-arc mantle corner (FMC). To evaluate these extreme rupture limits, we map the FMC from southern Vancouver Island to central Oregon by combining published seismic velocity structures with a model of the Juan de Fuca plate. These data indicate that the FMC is somewhat shallower beneath Vancouver Island (36–38 km) and Oregon (35–40 km) and deeper beneath Washington (41–43 km). The updip edge of tremor follows the same general pattern, overlying a slightly shallower Juan de Fuca plate beneath Vancouver Island and Oregon (∼30 km) and a deeper plate beneath Washington (∼35 km). Similar to the Nankai subduction zone, the best constrained FMC depths correlate with the center of the tremor band suggesting that ETS is controlled by conditions near the FMC rather than directly by temperature or pressure. Unlike Nankai, a gap as wide as 70 km exists between the downdip limit of the inferred locked zone and the FMC. This gap also encompasses a ∼50 km wide gap between the inferred locked zones and the updip limit of tremor. The separation of these features offers a natural laboratory for determining the key controls on downdip rupture limits.

Synthetic Modeling of A Geothermal System Using Audio-magnetotelluric (AMT) and Magnetotelluric (MT)

NASA Astrophysics Data System (ADS)

Mega Saputra, Rifki; Widodo

2017-04-01

Indonesia has 40% of the world’s potential geothermal resources with estimated capacity of 28,910 MW. Generally, the characteristic of the geothermal system in Indonesia is liquid-dominated systems, which driven by volcanic activities. In geothermal exploration, electromagnetic methods are used to map structures that could host potential reservoirs and source rocks. We want to know the responses of a geothermal system using synthetic data of Audio-magnetotelluric (AMT) and Magnetotelluric (MT). Due to frequency range, AMT and MT data can resolve the shallow and deeper structure, respectively. 1-D models have been performed using AMT and MT data. The results indicate that AMT and MT data give detailed conductivity distribution of geothermal structure.

On the nano-hillock formation induced by slow highly charged ions on insulator surfaces

NASA Astrophysics Data System (ADS)

Lemell, C.; El-Said, A. S.; Meissl, W.; Gebeshuber, I. C.; Trautmann, C.; Toulemonde, M.; Burgdörfer, J.; Aumayr, F.

2007-10-01

We discuss the creation of nano-sized protrusions on insulating surfaces using slow highly charged ions. This method holds the promise of forming regular structures on surfaces without inducing defects in deeper lying crystal layers. We find that only projectiles with a potential energy above a critical value are able to create hillocks. Below this threshold no surface modification is observed. This is similar to the track and hillock formation induced by swift (˜GeV) heavy ions. We present a model for the conversion of potential energy stored in the projectiles into target-lattice excitations (heat) and discuss the possibility to create ordered structures using the guiding effect observed in insulating conical structures.

Evolution of the Median Tectonic Line fault zone, SW Japan, during exhumation

NASA Astrophysics Data System (ADS)

Shigematsu, Norio; Kametaka, Masao; Inada, Noriyuki; Miyawaki, Masahiro; Miyakawa, Ayumu; Kameda, Jun; Togo, Tetsuhiro; Fujimoto, Koichiro

2017-01-01

Like many crustal-scale fault zones, the Median Tectonic Line (MTL) fault zone in Japan preserves fault rocks that formed across a broad range of physical conditions. We examined the architecture of the MTL at a large new outcrop in order to understand fault behaviours under different crustal levels. The MTL here strikes almost E-W, dips to the north, and juxtaposes the Sanbagawa metamorphic rocks to the south against the Izumi Group sediments to the north. The fault core consists mainly of Sanbagawa-derived fault gouges. The fault zone can be divided into several structural units, including two slip zones (upper and lower slip zones), where the lower slip zone is more conspicuous. Crosscutting relationships among structures and kinematics indicate that the fault zone records four stages of deformation. Microstructures and powder X-ray diffraction (XRD) analyses indicate that the four stages of deformation occurred under different temperature conditions. The oldest deformation (stage 1) was widely distributed, and had a top-to-the-east (dextral) sense of slip at deep levels of the seismogenic zone. Deformation with the same sense of slip, then became localised in the lower slip zone (stage 2). Subsequently, the slip direction in the lower slip zone changed to top-to-the-west (sinistral-normal) (stage 3). The final stage of deformation (stage 4) involved top-to-the-north normal faulting along the two slip zones within the shallow crust (near the surface). The widely distributed stage 1 damage zone characterises the deeper part of the seismogenic zone, while the sets of localised principal slip zones and branching faults of stage 4 characterise shallow depths. The fault zone architecture described in this paper leads us to suggest that fault zones display different behaviours at different crustal levels.

Subglacial geomorphology reveals connections between glacial dynamics and deeper hydrocarbon reservoir leakages at the Polar north Atlantic continental margin

NASA Astrophysics Data System (ADS)

Andreassen, Karin; Deryabin, Alexey; Rafaelsen, Bjarne; Richarsen, Morten

2014-05-01

Three-dimensional (3D) seismic data from the Barents Sea continental shelf and margin reveal spatial links between subsurface distributions of inferred glacitectonic geomorphic landforms and seismic indications of fluid flow from deeper hydrocarbon reservoirs. Particularly 3D seismic techniques allow detailed mapping and visualization of buried glacial geomorphology and geophysical indications of fluid flow and gas accumulations. Several subsurface glacitectonic landforms show pronounced depressions up to 200 m deep and several km wide. These appear in many locations just upstream from hills of similar sizes and volumes, and are inferred to be hill-hole pairs. The hills are interpreted as thrusted and compressed slabs of sediments and bedrock which have been removed from their original location by moving glaciers during the last glacial, leaving the holes as depressions. The mapped depressions seem often to appear in sediments of different lithology and age. The appearance of mega-scale glacial lineations indicates that fast-flowing ice streams, draining the former Barents Sea and Fennoscandian ice sheets were the main agents of these glacitectonic landforms. Mapped fluid flow migration pathways from deeper reservoirs and shallow gas accumulations show evidence of active fluid migration systems over longer time periods, and their spatial relationship with the glacitectonic landforms is documented for several areas of the Barents Sea continental shelf. A conceptual model is proposed for the depressions, where brittle glacitectonic deformation takes place along a weak layer at the base of gas-hydrate cemented sediments. Fluid flow from deeper hydrocarbon reservoirs is inferred to be associated with cycles of glaciations and unloading due to glacial erosion and ice retreat, causing gas to expand, which in turn potentially breaks the traps, reactivates faults and creates new faults. Gas hydrate stability modeling indicates that the south-western Barents Sea is today outside the stability area for methane gas hydrates of structure I, but hydrates of this type would have been stable when grounded ice covered the area. Structure II hydrates, with a few percent of heavier hydrocarbons are likely stable within the area today. Acknowledgements. This research is part of the Centre of Excellence for Gas Hydrate, Environment and Climate (CAGE) funded by the Research Council of Norway (RCN) grant 223259. It is also a contribution to the project "Glaciations in the Barents Sea area (GlaciBar)" RCN grant 20067 and to the Research Centre for Arctic Petroleum Exploration (ARCEx) RCN grant 228107.

Alternative Organisational Learning Therapy: An Empirical Case Study Using Behaviour and U Theory

ERIC Educational Resources Information Center

Ho, Li-An; Kuo, Tsung-Hsien

2009-01-01

This paper draws on the concept and process of deeper learning, namely the U theory (Senge, Scharmer, Jaworski, & Flowers, 2004a). As a driver to get a deeper exploration of organisational change process, the theory of U goes beyond the interpersonal aspects of learning, instead focusing on a deeper personal generative learning that emphasizes…

Measuring Deeper Learning through Cognitively Demanding Test Items: Results from the Analysis of Six National and International Exams. Research Report

ERIC Educational Resources Information Center

Yuan, Kun; Le, Vi-Nhuan

2014-01-01

In 2010, the William and Flora Hewlett Foundation's Education Program has established the Deeper Learning Initiative, which focuses on students' development of deeper learning skills (i.e., the mastery of core academic content, critical-thinking, problem-solving, collaboration, communication, and "learn-how-to-learn" skills). Two test…

The Role of Digital Technologies in Deeper Learning. Students at the Center: Deeper Learning Research Series

ERIC Educational Resources Information Center

Dede, Chris

2014-01-01

To compete in today's global, knowledge-based, innovation-centered economy, young people must go beyond a high school diploma and acquire not just academic knowledge, but interpersonal and interpersonal capacities. That is, they must engage in deeper learning. As schools shift away from traditional education models in favor or providing deeper…

Crosswalk Analysis of Deeper Learning Skills to Common Core State Standards

ERIC Educational Resources Information Center

Conley, David T.

2011-01-01

The Educational Policy Improvement Center (EPIC) conducted a crosswalk between the Deeper Learning Skills (DLS) and the Common Core State Standards (CCSS). The purpose of the crosswalk was to understand the ways in which strategies for deeper learning relate to the CCSS. This comparison was not solely or simply an alignment study, although some…

How School Districts Can Support Deeper Learning: The Need for Performance Alignment. Executive Summary. Deeper Learning Research Series

ERIC Educational Resources Information Center

Honig, Meredith I.; Rainey, Lydia R.

2015-01-01

School district leaders nationwide aspire to help their schools become vibrant places for learning--where students have meaningful academic opportunities "and" develop critical thinking and problem-solving skills, the ability to communicate effectively, and other deeper learning capacities that are essential to success in later life.…

Sonic Boom Ocean Penetration: Noise Metric Comparison and Initial Focusing Results

NASA Technical Reports Server (NTRS)

Sparrow, Victor W.

1996-01-01

The purpose of the present research is to determine the impact by sonic boom noise penetration into the ocean. Since the 1994 LaRC High Speed Research Program Sonic Boom Workshop several new results have been obtained. This talk reviews these results, and emphasizes the two most important findings. The first major result is an improved understanding of the noise spectra of the penetrating sonic boom. It was determined that weighted sound exposure levels decrease with deeper ocean depths significantly faster than unweighted sound exposure levels. This is because low frequencies penetrate the ocean deeper than high frequencies. Several noise metrics were used including peak, SEL, C-SEL, A-SEL, and PLdB, and results are given for all. These results are important because they show that the sonic boom noise impact on marine life a few meters below the ocean surface may be significantly lower using weighted sound levels than if one were to measure the impact using unweighted levels. The other major finding is the first estimate of the worst case peak levels produced by a penetrating sonic boom being focused by a sinusoidal ocean surface. The method of analysis chosen was computational, a time domain finite difference algorithm. The method is outlined and then example results are presented. For rounded sonic boom waveforms incident on a sinusoidal ocean surface, it is shown that the percentage increase or decrease in pressure is only occasionally larger than 10%, rarely 25%. These fluctuations indicate, under the assumptions already given, that any increase or decrease in sound level underwater due to focusing or defocusing should be small, less than 3 dB.

Social influence and obesity.

PubMed

Hammond, Ross A

2010-10-01

To review a selection of research published in the last 12 months on the role of social influence in the obesity epidemic. Recent papers add evidence to previous work linking social network structures and obesity. Social norms, both eating norms and body image norms, are identified as one major source of social influence through networks. Social capital and social stress are additional types of social influence. There is increasing evidence that social influence and social network structures are significant factors in obesity. Deeper understanding of the mechanisms of action and dynamics of social influence, and its link with other factors involved in the obesity epidemic, is an important goal for further research.

Liquid Structures and Physical Properties -- Ground Based Studies for ISS Experiments

NASA Technical Reports Server (NTRS)

Kelton, K. F.; Bendert, J. C.; Mauro, N. A.

2012-01-01

Studies of electrostatically-levitated supercooled liquids have demonstrated strong short- and medium-range ordering in transition metal and alloy liquids, which can influence phase transitions like crystal nucleation and the glass transition. The structure is also related to the liquid properties. Planned ISS experiments will allow a deeper investigation of these results as well as the first investigations of a new type of coupling in crystal nucleation in primary crystallizing liquids, resulting from a linking of the stochastic processes of diffusion with interfacial-attachment. A brief description of the techniques used for ground-based studies and some results relevant to planned ISS investigations are discussed.

In-situ realtime monitoring of nanoscale gold electroplating using micro-electro-mechanical systems liquid cell operating in transmission electron microscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Egawa, Minoru; Fujita, Hiroyuki; Ishida, Tadashi, E-mail: ishida.t.ai@m.titech.ac.jp

2016-01-11

The dynamics of nanoscale electroplating between gold electrodes was investigated using a microfabricated liquid cell mounted on a scanning transmission electron microscope. The electroplating was recorded in-situ for 10 min with a spatial resolution higher than 6 nm. At the beginning of the electroplating, gold spike-like structures of about 50 nm in size grew from an electrode, connected gold nanoclusters around them, and form three dimensional nanoscale structures. We visualized the elementary process of the gold electroplating, and believe that the results lead to the deeper understanding of electroplating at the nanoscale.

Pathogenesis and Treatment of Bovine Foot Rot.

PubMed

Van Metre, David C

2017-07-01

Bovine foot rot (BFR) is an infectious disease of the interdigital skin and subcutaneous tissues of beef and dairy cattle that occurs under a variety of management and environmental settings. The anaerobic, gram-negative bacteria Fusobacterium necrophorum, Porphyromonas levii, and Prevotella intermedia are commonly isolated from lesions. A multitude of host, agent, and environmental factors contribute to the development of BFR. Initiation of systemic antimicrobial therapy early in the course of disease commonly leads to resolution. Delays in treatment may result in extension of infection into deeper bone, synovial structures, or ligamentous structures, and the prognosis for recovery is reduced. Copyright © 2017 Elsevier Inc. All rights reserved.

Surface-Water and Groundwater Interactions along the Withlacoochee River, West-Central Florida

USGS Publications Warehouse

Trommer, J.T.; Yobbi, D.K.; McBride, W.S.

2009-01-01

A study of the Withlacoochee River watershed in west-central Florida was conducted from October 2003 to March 2007 to gain a better understanding of the hydrology and surface-water and groundwater interactions along the river. The Withlacoochee River originates in the Green Swamp area in north-central Polk County and flows northerly through seven counties, emptying into the Gulf of Mexico. This study includes only the part of the watershed located between the headwaters in the Green Swamp and the U.S. Geological Survey gaging station near Holder, Florida. The Withlacoochee River within the study area is about 108 miles long and drains about 1,820 square miles. The Withlacoochee River watershed is underlain by thick sequences of carbonate rock that are covered by thin surficial deposits of unconsolidated sand and sandy clay. The clay layer is breached in many places because of the karst nature of the underlying limestone, and the degree of confinement between the Upper Florida aquifer and the surficial aquifer is highly variable throughout the watershed. The potential for movement of water from the surface or shallow deposits to deeper deposits, or from deeper deposits to the shallow deposits, exists throughout the Withlacoochee River watershed. Water levels were higher in deeper Upper Floridan aquifer wells than in shallow Upper Floridan aquifer wells or surficial aquifer wells at 11 of 19 paired or nested well sites, indicating potential for discharge to the surface-water system. Water levels were higher in shallow Upper Floridan aquifer or surficial aquifer wells than in deeper Upper Floridan aquifer wells at five other sites, indicating potential for recharge to the deeper Upper Floridan aquifer. Water levels in the surficial aquifer and Upper Floridan aquifer wells at the remaining three sites were virtually the same, indicating little or no confinement at the sites. Potentiometric-surface maps of the Upper Floridan aquifer indicate the pattern of groundwater flow in the aquifer did not vary greatly from season to season during the study. Potentiometric contours indicate groundwater discharge to the river in the vicinity of Dade City and Lake Panasoffkee. During dry periods, groundwater from the underlying Upper Floridan aquifer contributed to the flow in the river. During wet periods, streamflow had additional contributions from runoff and input from tributaries. Groundwater has a greater effect on streamflow downstream from the Dade City station than upstream from the Dade City station because confinement between surficial deposits and the Upper Floridan aquifer is greater in the Green Swamp area than in downstream areas. Estimates of streamflow gains and losses were made along the Withlacoochee River during base-flow conditions in May 2004, April 2005, and April 2006. Base flow was higher in April 2005 than in May 2004 and April 2006. Consistent net seepage gains were identified in 16 of 20 subreaches analyzed during all seepage runs. The direction of exchange was variable in the remaining four subreaches. Low specific conductance, pH, and calcium concentrations in water from the Withlacoochee River near the headwater area indicated a surface-water system not directly connected to the Upper Floridan aquifer. Downstream from the Dade City station, higher specific conductance, pH, and calcium concentrations in the river water indicated an increasing influence of groundwater, and were similar to groundwater during low-flow conditions. Strontium isotope ratios indicate groundwater originates from shallow parts of the Upper Floridan aquifer in the upper reaches of the river, and from increasingly deeper parts of the aquifer in the downstream direction. Mean annual base-flow estimates also indicate increasing groundwater discharge to the river in the downstream direction. Mean annual base flow estimated using standard hydrograph separation method assumptions ranged from about 4.7 to 5.1 inches per year

The structure of human tripeptidyl peptidase II as determined by a hybrid approach.

PubMed

Schönegge, Anne-Marie; Villa, Elizabeth; Förster, Friedrich; Hegerl, Reiner; Peters, Jürgen; Baumeister, Wolfgang; Rockel, Beate

2012-04-04

Tripeptidyl-peptidase II (TPPII) is a high molecular mass (∼5 MDa) serine protease, which is thought to act downstream of the 26S proteasome, cleaving peptides released by the latter. Here, the structure of human TPPII (HsTPPII) has been determined to subnanometer resolution by cryoelectron microscopy and single-particle analysis. The complex is built from two strands forming a quasihelical structure harboring a complex system of inner cavities. HsTPPII particles exhibit some polymorphism resulting in complexes consisting of nine or of eight dimers per strand. To obtain deeper insights into the architecture and function of HsTPPII, we have created a pseudoatomic structure of the HsTPPII spindle using a comparative model of HsTPPII dimers and molecular dynamics flexible fitting. Analyses of the resulting hybrid structure of the HsTPPII holocomplex provide new insights into the mechanism of maturation and activation. Copyright © 2012 Elsevier Ltd. All rights reserved.

Seamless growth of a supramolecular carpet

PubMed Central

Kim, Ju-Hyung; Ribierre, Jean-Charles; Yang, Yu Seok; Adachi, Chihaya; Kawai, Maki; Jung, Jaehoon; Fukushima, Takanori; Kim, Yousoo

2016-01-01

Organic/metal interfaces play crucial roles in the formation of intermolecular networks on metal surfaces and the performance of organic devices. Although their purity and uniformity have profound effects on the operation of organic devices, the formation of organic thin films with high interfacial uniformity on metal surfaces has suffered from the intrinsic limitation of molecular ordering imposed by irregular surface structures. Here we demonstrate a supramolecular carpet with widely uniform interfacial structure and high adaptability on a metal surface via a one-step process. The high uniformity is achieved with well-balanced interfacial interactions and site-specific molecular rearrangements, even on a pre-annealed amorphous gold surface. Co-existing electronic structures show selective availability corresponding to the energy region and the local position of the system. These findings provide not only a deeper insight into organic thin films with high structural integrity, but also a new way to tailor interfacial geometric and electronic structures. PMID:26839053

Lithographically-generated 3D lamella layers and their structural color

NASA Astrophysics Data System (ADS)

Zhang, Sichao; Chen, Yifang; Lu, Bingrui; Liu, Jianpeng; Shao, Jinhai; Xu, Chen

2016-04-01

Inspired by the structural color from the multilayer nanophotonic structures in Morpho butterfly wing scales, 3D lamellae layers in dielectric polymers (polymethyl methacrylate, PMMA) with n ~ 1.5 were designed and fabricated by standard top-down electron beam lithography with one-step exposure followed by an alternating development/dissolution process of PMMA/LOR (lift-off resist) multilayers. This work offers direct proof of the structural blue/green color via lithographically-replicated PMMA/air multilayers, analogous to those in real Morpho butterfly wings. The success of nanolithography in this work for the 3D lamellae structures in dielectric polymers not only enables us to gain deeper insight into the mysterious blue color of the Morpho butterfly wings, but also breaks through the bottleneck in technical development toward broad applications in gas/liquid sensors, 3D meta-materials, coloring media, and infrared imaging devices, etc.

The RCSB Protein Data Bank: views of structural biology for basic and applied research and education

PubMed Central

Rose, Peter W.; Prlić, Andreas; Bi, Chunxiao; Bluhm, Wolfgang F.; Christie, Cole H.; Dutta, Shuchismita; Green, Rachel Kramer; Goodsell, David S.; Westbrook, John D.; Woo, Jesse; Young, Jasmine; Zardecki, Christine; Berman, Helen M.; Bourne, Philip E.; Burley, Stephen K.

2015-01-01

The RCSB Protein Data Bank (RCSB PDB, http://www.rcsb.org) provides access to 3D structures of biological macromolecules and is one of the leading resources in biology and biomedicine worldwide. Our efforts over the past 2 years focused on enabling a deeper understanding of structural biology and providing new structural views of biology that support both basic and applied research and education. Herein, we describe recently introduced data annotations including integration with external biological resources, such as gene and drug databases, new visualization tools and improved support for the mobile web. We also describe access to data files, web services and open access software components to enable software developers to more effectively mine the PDB archive and related annotations. Our efforts are aimed at expanding the role of 3D structure in understanding biology and medicine. PMID:25428375

Tomcat-Projects_RF

DOE Office of Scientific and Technical Information (OSTI.GOV)

Warrant, Marilyn M.; Garcia, Rudy J.; Zhang, Pengchu

2004-09-15

Tomcat-Projects_RF is a software package for analyzing sensor data obtained from a database and displaying the results with Java Servlet Pages (JSP). SQL Views into the dataset are tailored for personnel having different roles in monitoring the items in a storage facility. For example, an inspector, a host treaty compliance officer, a system engineer and software developers were the users identified that would need to access data at different levels of detail, The analysis provides a high level status of the storage facility and allows the user to go deeper into the data details if the user desires.

Emergent latent symbol systems in recurrent neural networks

NASA Astrophysics Data System (ADS)

Monner, Derek; Reggia, James A.

2012-12-01

Fodor and Pylyshyn [(1988). Connectionism and cognitive architecture: A critical analysis. Cognition, 28(1-2), 3-71] famously argued that neural networks cannot behave systematically short of implementing a combinatorial symbol system. A recent response from Frank et al. [(2009). Connectionist semantic systematicity. Cognition, 110(3), 358-379] claimed to have trained a neural network to behave systematically without implementing a symbol system and without any in-built predisposition towards combinatorial representations. We believe systems like theirs may in fact implement a symbol system on a deeper and more interesting level: one where the symbols are latent - not visible at the level of network structure. In order to illustrate this possibility, we demonstrate our own recurrent neural network that learns to understand sentence-level language in terms of a scene. We demonstrate our model's learned understanding by testing it on novel sentences and scenes. By paring down our model into an architecturally minimal version, we demonstrate how it supports combinatorial computation over distributed representations by using the associative memory operations of Vector Symbolic Architectures. Knowledge of the model's memory scheme gives us tools to explain its errors and construct superior future models. We show how the model designs and manipulates a latent symbol system in which the combinatorial symbols are patterns of activation distributed across the layers of a neural network, instantiating a hybrid of classical symbolic and connectionist representations that combines advantages of both.

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers

PubMed Central

Bai, Ren; Wang, Jun-Tao; Deng, Ye; He, Ji-Zheng; Feng, Kai; Zhang, Li-Mei

2017-01-01

Paddy rice fields occupy broad agricultural area in China and cover diverse soil types. Microbial community in paddy soils is of great interest since many microorganisms are involved in soil functional processes. In the present study, Illumina Mi-Seq sequencing and functional gene array (GeoChip 4.2) techniques were combined to investigate soil microbial communities and functional gene patterns across the three soil types including an Inceptisol (Binhai), an Oxisol (Leizhou), and an Ultisol (Taoyuan) along four profile depths (up to 70 cm in depth) in mesocosm incubation columns. Detrended correspondence analysis revealed that distinctly differentiation in microbial community existed among soil types and profile depths, while the manifest variance in functional structure was only observed among soil types and two rice growth stages, but not across profile depths. Along the profile depth within each soil type, Acidobacteria, Chloroflexi, and Firmicutes increased whereas Cyanobacteria, β-proteobacteria, and Verrucomicrobia declined, suggesting their specific ecophysiological properties. Compared to bacterial community, the archaeal community showed a more contrasting pattern with the predominant groups within phyla Euryarchaeota, Thaumarchaeota, and Crenarchaeota largely varying among soil types and depths. Phylogenetic molecular ecological network (pMEN) analysis further indicated that the pattern of bacterial and archaeal communities interactions changed with soil depth and the highest modularity of microbial community occurred in top soils, implying a relatively higher system resistance to environmental change compared to communities in deeper soil layers. Meanwhile, microbial communities had higher connectivity in deeper soils in comparison with upper soils, suggesting less microbial interaction in surface soils. Structure equation models were developed and the models indicated that pH was the most representative characteristics of soil type and identified as the key driver in shaping both bacterial and archaeal community structure, but did not directly affect microbial functional structure. The distinctive pattern of microbial taxonomic and functional composition along soil profiles implied functional redundancy within these paddy soils. PMID:28611747

Microbial Community and Functional Structure Significantly Varied among Distinct Types of Paddy Soils But Responded Differently along Gradients of Soil Depth Layers.

PubMed

Bai, Ren; Wang, Jun-Tao; Deng, Ye; He, Ji-Zheng; Feng, Kai; Zhang, Li-Mei

2017-01-01

Paddy rice fields occupy broad agricultural area in China and cover diverse soil types. Microbial community in paddy soils is of great interest since many microorganisms are involved in soil functional processes. In the present study, Illumina Mi-Seq sequencing and functional gene array (GeoChip 4.2) techniques were combined to investigate soil microbial communities and functional gene patterns across the three soil types including an Inceptisol (Binhai), an Oxisol (Leizhou), and an Ultisol (Taoyuan) along four profile depths (up to 70 cm in depth) in mesocosm incubation columns. Detrended correspondence analysis revealed that distinctly differentiation in microbial community existed among soil types and profile depths, while the manifest variance in functional structure was only observed among soil types and two rice growth stages, but not across profile depths. Along the profile depth within each soil type, Acidobacteria , Chloroflexi , and Firmicutes increased whereas Cyanobacteria , β -proteobacteria , and Verrucomicrobia declined, suggesting their specific ecophysiological properties. Compared to bacterial community, the archaeal community showed a more contrasting pattern with the predominant groups within phyla Euryarchaeota , Thaumarchaeota , and Crenarchaeota largely varying among soil types and depths. Phylogenetic molecular ecological network (pMEN) analysis further indicated that the pattern of bacterial and archaeal communities interactions changed with soil depth and the highest modularity of microbial community occurred in top soils, implying a relatively higher system resistance to environmental change compared to communities in deeper soil layers. Meanwhile, microbial communities had higher connectivity in deeper soils in comparison with upper soils, suggesting less microbial interaction in surface soils. Structure equation models were developed and the models indicated that pH was the most representative characteristics of soil type and identified as the key driver in shaping both bacterial and archaeal community structure, but did not directly affect microbial functional structure. The distinctive pattern of microbial taxonomic and functional composition along soil profiles implied functional redundancy within these paddy soils.

Inquiry-based Science Instruction in High School Biology Courses: A Multiple Case Study

NASA Astrophysics Data System (ADS)

Aso, Eze

A lack of research exists about how secondary school science teachers use inquiry-based instruction to improve student learning. The purpose of this qualitative study was to explore how science teachers used inquiry-based instruction to improve student learning in high school biology courses. The conceptual framework was based on Banchi and Bell's model of increasing levels of complexity for inquiry-based instruction. A multiple case study research design was conducted of biology programs at 3 high schools in an urban school district in the northeastern region of the United States. Participants included 2 biology teachers from each of the 3 high schools. Data were collected from individual interviews with biology teachers, observations of lessons in biology, and documents related to state standards, assessments, and professional development. The first level of data analysis involved coding and categorizing the interview and observation data. A content analysis was used for the documents. The second level of data analysis involved examining data across all sources and all cases for themes and discrepancies. According to study findings, biology teachers used confirmation, structure, and guided inquiry to improve student learning. However, they found open inquiry challenging and frustrating to implement because professional development about scaffolding of instruction over time was needed, and students' reading and writing skills needed to improve. This study contributes to positive social change by providing educators and researchers with a deeper understanding about how to scaffold levels of inquiry-based science instruction in order to help students become scientifically literate citizens.

The nuclear genome of Rhazya stricta and the evolution of alkaloid diversity in a medically relevant clade of Apocynaceae

PubMed Central

Sabir, Jamal S. M.; Jansen, Robert K.; Arasappan, Dhivya; Calderon, Virginie; Noutahi, Emmanuel; Zheng, Chunfang; Park, Seongjun; Sabir, Meshaal J.; Baeshen, Mohammed N.; Hajrah, Nahid H.; Khiyami, Mohammad A.; Baeshen, Nabih A.; Obaid, Abdullah Y.; Al-Malki, Abdulrahman L.; Sankoff, David; El-Mabrouk, Nadia; Ruhlman, Tracey A.

2016-01-01

Alkaloid accumulation in plants is activated in response to stress, is limited in distribution and specific alkaloid repertoires are variable across taxa. Rauvolfioideae (Apocynaceae, Gentianales) represents a major center of structural expansion in the monoterpenoid indole alkaloids (MIAs) yielding thousands of unique molecules including highly valuable chemotherapeutics. The paucity of genome-level data for Apocynaceae precludes a deeper understanding of MIA pathway evolution hindering the elucidation of remaining pathway enzymes and the improvement of MIA availability in planta or in vitro. We sequenced the nuclear genome of Rhazya stricta (Apocynaceae, Rauvolfioideae) and present this high quality assembly in comparison with that of coffee (Rubiaceae, Coffea canephora, Gentianales) and others to investigate the evolution of genome-scale features. The annotated Rhazya genome was used to develop the community resource, RhaCyc, a metabolic pathway database. Gene family trees were constructed to identify homologs of MIA pathway genes and to examine their evolutionary history. We found that, unlike Coffea, the Rhazya lineage has experienced many structural rearrangements. Gene tree analyses suggest recent, lineage-specific expansion and diversification among homologs encoding MIA pathway genes in Gentianales and provide candidate sequences with the potential to close gaps in characterized pathways and support prospecting for new MIA production avenues. PMID:27653669

[Quid Nunc? The relationship between the medical world and society in Belgium and in Europe of the 25 at the dawn of the 21st century].

PubMed

Frühling, J

2004-01-01

Since about twenty-five years, we observe important transformations of the socio-economic structures of our society, modifying the main references which reign over the social structures and thus over the medical world. As a result, we observe a social syndrome which we can define as a divorce between the medical world and the society. The consequences of this phenomenon can constitute a real danger for the whole society; nevertheless, actually we can still consider that Belgium can assure a very high level of medical care for the greatest part of the population for a really social prize. The main "clinical signs" of this divorce are mentioned and analyzed, the deeper reasons of them as well. Among them, we cite the recent law about the quite exclusive rights of the patients, an incoherent legislation concerning medical activities, the hostility of the world of media against the physicians, the insuffiencies to finance health care and the attacks against several medical organizations and--at least--the fact to give more and more preference to the non-scientific parallel medicine. This whole social process should be kept back because this divorce is not only an economical problem, but rather a question of humanism and of social culture.

Computational Glycobiology: Mechanistic Studies of Carbohydrate-Active Enzymes and Implication for Inhibitor Design.

PubMed

Montgomery, Andrew P; Xiao, Kela; Wang, Xingyong; Skropeta, Danielle; Yu, Haibo

2017-01-01

Carbohydrate-active enzymes (CAZymes) are families of essential and structurally related enzymes, which catalyze the creation, modification, and degradation of glycosidic bonds in carbohydrates to maintain essentially all kingdoms of life. CAZymes play a key role in many biological processes underpinning human health and diseases (e.g., cancer, diabetes, Alzheimer's diseases, AIDS) and have thus emerged as important drug targets in the fight against pathogenesis. The realization of the full potential of CAZymes remains a significant challenge, relying on a deeper understanding of the molecular mechanisms of catalysis. Considering numerous unsettled questions in the literature, while with a large amount of structural, kinetic, and mutagenesis data available for CAZymes, there is a pressing need and an abundant opportunity for collaborative computational and experimental investigations with the aim to unlock the secrets of CAZyme catalysis at an atomic level. In this review, we briefly survey key methodology development in computational studies of CAZyme catalysis. This is complemented by selected case studies highlighting mechanistic insights provided by computational glycobiology. Implication for inhibitor design by mimicking the transition state is also illustrated for both glycoside hydrolases and glycosyltransferases. The challenges for such studies will be noted and finally an outlook for future directions will be provided. © 2017 Elsevier Inc. All rights reserved.

Application of bioinformatics tools and databases in microbial dehalogenation research (a review).

PubMed

Satpathy, R; Konkimalla, V B; Ratha, J

2015-01-01

Microbial dehalogenation is a biochemical process in which the halogenated substances are catalyzed enzymatically in to their non-halogenated form. The microorganisms have a wide range of organohalogen degradation ability both explicit and non-specific in nature. Most of these halogenated organic compounds being pollutants need to be remediated; therefore, the current approaches are to explore the potential of microbes at a molecular level for effective biodegradation of these substances. Several microorganisms with dehalogenation activity have been identified and characterized. In this aspect, the bioinformatics plays a key role to gain deeper knowledge in this field of dehalogenation. To facilitate the data mining, many tools have been developed to annotate these data from databases. Therefore, with the discovery of a microorganism one can predict a gene/protein, sequence analysis, can perform structural modelling, metabolic pathway analysis, biodegradation study and so on. This review highlights various methods of bioinformatics approach that describes the application of various databases and specific tools in the microbial dehalogenation fields with special focus on dehalogenase enzymes. Attempts have also been made to decipher some recent applications of in silico modeling methods that comprise of gene finding, protein modelling, Quantitative Structure Biodegradibility Relationship (QSBR) study and reconstruction of metabolic pathways employed in dehalogenation research area.

Biological aspects of early osteoarthritis.

PubMed

Madry, Henning; Luyten, Frank P; Facchini, Andrea

2012-03-01

Early OA primarily affects articular cartilage and involves the entire joint, including the subchondral bone, synovial membrane, menisci and periarticular structures. The aim of this review is to highlight the molecular basis and histopathological features of early OA. Selective review of literature. Risk factors for developing early OA include, but are not limited to, a genetic predisposition, mechanical factors such as axial malalignment, and aging. In early OA, the articular cartilage surface is progressively becoming discontinuous, showing fibrillation and vertical fissures that extend not deeper than into the mid-zone of the articular cartilage, reflective of OARSI grades 1.0-3.0. Early changes in the subchondral bone comprise a progressive increase in subchondral plate and subarticular spongiosa thickness. Early OA affects not only the articular cartilage and the subchondral bone but also other structures of the joint, such as the menisci, the synovial membrane, the joint capsule, ligaments, muscles and the infrapatellar fat pad. Genetic markers or marker combinations may become useful in the future to identify early OA and patients at risk. The high socioeconomic impact of OA suggests that a better insight into the mechanisms of early OA may be a key to develop more targeted reconstructive therapies at this first stage of the disease. Systematic review, Level II.

The nuclear genome of Rhazya stricta and the evolution of alkaloid diversity in a medically relevant clade of Apocynaceae.

PubMed

Sabir, Jamal S M; Jansen, Robert K; Arasappan, Dhivya; Calderon, Virginie; Noutahi, Emmanuel; Zheng, Chunfang; Park, Seongjun; Sabir, Meshaal J; Baeshen, Mohammed N; Hajrah, Nahid H; Khiyami, Mohammad A; Baeshen, Nabih A; Obaid, Abdullah Y; Al-Malki, Abdulrahman L; Sankoff, David; El-Mabrouk, Nadia; Ruhlman, Tracey A

2016-09-22

Alkaloid accumulation in plants is activated in response to stress, is limited in distribution and specific alkaloid repertoires are variable across taxa. Rauvolfioideae (Apocynaceae, Gentianales) represents a major center of structural expansion in the monoterpenoid indole alkaloids (MIAs) yielding thousands of unique molecules including highly valuable chemotherapeutics. The paucity of genome-level data for Apocynaceae precludes a deeper understanding of MIA pathway evolution hindering the elucidation of remaining pathway enzymes and the improvement of MIA availability in planta or in vitro. We sequenced the nuclear genome of Rhazya stricta (Apocynaceae, Rauvolfioideae) and present this high quality assembly in comparison with that of coffee (Rubiaceae, Coffea canephora, Gentianales) and others to investigate the evolution of genome-scale features. The annotated Rhazya genome was used to develop the community resource, RhaCyc, a metabolic pathway database. Gene family trees were constructed to identify homologs of MIA pathway genes and to examine their evolutionary history. We found that, unlike Coffea, the Rhazya lineage has experienced many structural rearrangements. Gene tree analyses suggest recent, lineage-specific expansion and diversification among homologs encoding MIA pathway genes in Gentianales and provide candidate sequences with the potential to close gaps in characterized pathways and support prospecting for new MIA production avenues.

Catalog of genetic progression of human cancers: breast cancer.

PubMed

Desmedt, Christine; Yates, Lucy; Kulka, Janina

2016-03-01

With the rapid development of next-generation sequencing, deeper insights are being gained into the molecular evolution that underlies the development and clinical progression of breast cancer. It is apparent that during evolution, breast cancers acquire thousands of mutations including single base pair substitutions, insertions, deletions, copy number aberrations, and structural rearrangements. As a consequence, at the whole genome level, no two cancers are identical and few cancers even share the same complement of "driver" mutations. Indeed, two samples from the same cancer may also exhibit extensive differences due to constant remodeling of the genome over time. In this review, we summarize recent studies that extend our understanding of the genomic basis of cancer progression. Key biological insights include the following: subclonal diversification begins early in cancer evolution, being detectable even in in situ lesions; geographical stratification of subclonal structure is frequent in primary tumors and can include therapeutically targetable alterations; multiple distant metastases typically arise from a common metastatic ancestor following a "metastatic cascade" model; systemic therapy can unmask preexisting resistant subclones or influence further treatment sensitivity and disease progression. We conclude the review by describing novel approaches such as the analysis of circulating DNA and patient-derived xenografts that promise to further our understanding of the genomic changes occurring during cancer evolution and guide treatment decision making.

Intramolecular Hydrogen Bonding in Benzoxazines: When Structural Design Becomes Functional.

PubMed

Froimowicz, Pablo; Zhang, Kan; Ishida, Hatsuo

2016-02-18

The future evolution of benzoxazines and polybenzoxazines as advanced molecular, structural, functional, engineering, and newly commercial materials depends to a great extent on a deeper and more fundamental understanding at the molecular level. In this contribution, the field of benzoxazines is briefly introduced along with a more detailed review of ortho-amide-functional benzoxazines, which are the main subjects of this article. Provided in this article are the detailed and solid scientific evidences of intramolecular five-membered-ring hydrogen bonding, which is supposed to be responsible for the unique and characteristic features exhibited by this ever-growing family of ortho-functionalized benzoxazines. One-dimensional (1D) (1)H NMR spectroscopy was used to study various concentrations of benzoxazines in various solvents with different hydrogen-bonding capability and at various temperatures to investigate in detail the nature of hydrogen bonding in both ortho-amide-functionalized benzoxazine and its para counterpart. These materials were further investigated by two-dimensional (2D) (1)H-(1)H nuclear Overhauser effect spectroscopy (NOESY) to verify and support the conclusions derived during the 1D (1)H NMR experiments. Only highly purified single-crystal benzoxazine samples have been used for this study to avoid additional interactions caused by any impurities. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Revisiting Hardy's paradox: counterfactual statements, real measurements, entanglement and weak values

NASA Astrophysics Data System (ADS)

Aharonov, Yakir; Botero, Alonso; Popescu, Sandu; Reznik, Benni; Tollaksen, Jeff

2002-08-01

Hardy's paradox is revisited. Usually the paradox is dismissed on grounds of counterfactuality, i.e., because the paradoxical effects appear only when one considers results of experiments which do not actually take place. We suggest a new set of measurements in connection with Hardy's scheme, and show that when they are actually performed, they yield strange and surprising outcomes. More generally, we claim that counterfactual paradoxes point to a deeper structure inherent to quantum mechanics.

Self-Interaction Corrected Electronic Structure and Energy Gap of CuAlO2 beyond Local Density Approximation

NASA Astrophysics Data System (ADS)

Nakanishi, Akitaka

2011-05-01

We implemented a self-interaction correction (SIC) into first-principles calculation code to go beyond local density approximation and applied it to CuAlO2. Our simulation shows that the valence band width calculated within the SIC is narrower than that calculated without the SIC because the SIC makes the d-band potential deeper. The energy gap calculated within the SIC expands and is close to experimental data.

Refinement of Regional Distance Seismic Moment Tensor and Uncertainty Analysis for Source-Type Identification

DTIC Science & Technology

2014-09-02

release; distribution is unlimited. rock zone which provides a pathway for formation fluids, natural gas and crude oil from deeper strata that are... southeast Louisiana (Figure 21). It is a part of the Gulf Coast salt basin which exhibits many salt structures formed by upward flow of sedimentary salt...primarily, evaporites) on account of low density of salt and overburden pressures caused by younger sedimentary deposits (Beckman and Williamson, 1990

Cordilleran Longevity, Elevation and Heat Driven by Lithospheric Mantle Removal

NASA Astrophysics Data System (ADS)

Mackay-Hill, A.; Currie, C. A.; Audet, P.; Schaeffer, A. J.

2017-12-01

Cordilleran evolution is controlled by subduction zone back-arc processes that generate and maintain high topography due to elevated uppermost mantle temperatures. In the northern Canadian Cordillera (NCC), the persisting high mean elevation long after subduction has stopped (>50 Ma) requires a sustained source of heat either from small-scale mantle convection or lithospheric mantle removal; however direct structural constraints of these processes are sparse. We image the crust and uppermost mantle beneath the NCC using scattered teleseismic waves recorded on an array of broadband seismograph stations. We resolve two sharp and flat seismic discontinuities: a downward velocity increase at 35 km that we interpret as the Moho; and a deeper discontinuity with opposite velocity contrast at 50 km depth. Based on petrologic estimates, we interpret the deeper interface as the lithosphere-asthenosphere boundary (LAB), which implies an extremely thin ( 15 km) lithospheric mantle. We calculate the temperature at the Moho and the LAB in the range 800-900C and 1200-1300C, respectively. Below the LAB, we find west-dipping features far below the LAB beneath the eastern NCC that we associate with laminar downwelling of Cordilleran lithosphere. Whether these structures are fossilized or active, they suggest that lithospheric mantle removal near the Cordillera-Craton boundary may have provided the source of heat and elevation and therefore played a role in the longevity and stability of the Cordillera.

Acoustics Reveals the Presence of a Macrozooplankton Biocline in the Bay of Biscay in Response to Hydrological Conditions and Predator-Prey Relationships

PubMed Central

Lezama-Ochoa, Ainhoa; Irigoien, Xabier; Chaigneau, Alexis; Quiroz, Zaida; Lebourges-Dhaussy, Anne; Bertrand, Arnaud

2014-01-01

Bifrequency acoustic data, hydrological measurements and satellite data were used to study the vertical distribution of macrozooplankton in the Bay of Biscay in relation to the hydrological conditions and fish distribution during spring 2009. The most noticeable result was the observation of a ‘biocline’ during the day i.e., the interface where zooplankton biomass changes more rapidly with depth than it does in the layers above or below. The biocline separated the surface layer, almost devoid of macrozooplankton, from the macrozooplankton-rich deeper layers. It is a specific vertical feature which ties in with the classic diel vertical migration pattern. Spatiotemporal correlations between macrozooplankton and environmental variables (photic depth, thermohaline vertical structure, stratification index and chlorophyll-a) indicate that no single factor explains the macrozooplankton vertical distribution. Rather a set of factors, the respective influence of which varies from region to region depending on the habitat characteristics and the progress of the spring stratification, jointly influence the distribution. In this context, the macrozooplankton biocline is potentially a biophysical response to the search for a particular depth range where light attenuation, thermohaline vertical structure and stratification conditions together provide a suitable alternative to the need for expending energy in reaching deeper water without the risk of being eaten. PMID:24505374

Deep Change: Cases and Commentary on Schools and Programs of Successful Reform in High Stakes States. Research in Curriculum and Instruction

ERIC Educational Resources Information Center

Ponder, Gerald, Ed.; Strahan, David, Ed.

2005-01-01

This book presents cases of schools (Part One) and programs at the district level and beyond (Part Two) in which reform, while driven by high-stakes accountability, became larger and deeper through data-driven dialogue, culture change, organizational learning, and other elements of high performing cultures. Commentaries on cross-case patterns by…

The Effects of Guided vs. Unguided Pressured Planning on EFL Learners' Writing Fluency

ERIC Educational Resources Information Center

Mohammadnia, Zhila; Ayaz, Parisa

2015-01-01

Task-based planning can be conceptualized as the opportunity to work out task performance before the actual performance. It allows learners to process the content and language of their planned production at a deeper and more meaningful level. In the face of the wide range of research conducted on the effects of pre-task planning on L2 production,…

A Research Project on Higher Education. Investigations into the Learning and Teaching of Basic Concepts in Economics. No. 54. (1).

ERIC Educational Resources Information Center

Dahlgren, Lars Owe; Marton, Ference

A progress report on a research project directed toward facilitating deeper understanding of economic concepts at the university level is presented. The purposes of the project are to explore phenomena conceptualization and to investigate why some students are more successful at a learning task than other students. In the analysis of a…

Schools of Excellence and Equity? Using Equity Audits as a Tool to Expose a Flawed System of Recognition

ERIC Educational Resources Information Center

Brown, Kathleen M.

2010-01-01

The purpose of this article is to demonstrate how equity audits can be used as a tool to expose disparate achievement in schools that, on the surface and to the public, appear quite similar. To that end, the researcher probed beyond surface-level performance composite scores into deeper, more hidden data associated with state-recognized…

A Thousand Lights [and] A Thousand Lights: Teacher and Parent Guide. Brothers Series.

ERIC Educational Resources Information Center

Benton, Hope

This book for children (ages 8 to 14) and the accompanying teacher/parent guide present the story of two brothers, one of whom has a severe hearing impairment, who climb up Mt. Fuji in Japan. Information on the disability is presented subtly and incidentally to encourage the reader to relate more personally and foster a deeper level of acceptance…

The Historical or the Contemporary Context: Which of the Two Ensures a Deeper Understanding of Gas Properties?

ERIC Educational Resources Information Center

Milanovic, Vesna D.; Trivic, Dragica D.

2017-01-01

The aim of this research was to explore the effects of two approaches, designated as the historical and the contemporary one, on the level of students' understanding of the properties and the practical use of gases. Our research hypothesis was that the historical context of the discovery of gases and the study of their properties would deepen…

An On-Campus Botanical Tour to Promote Student Satisfaction and Learning in a University Level Biodiversity or General Biology Course

ERIC Educational Resources Information Center

Ratnayaka, Harish H.

2017-01-01

Outdoor, hands-on and experiential learning, as opposed to instruction-based learning in classroom, increases student satisfaction and motivation leading to a deeper understanding of the subject. However, the use of outdoor exercises in undergraduate biology courses is declining due to a variety of constraints. Thus, the goal of this paper is to…

The Effects of Different Levels of Disfluency on Learning Outcomes and Cognitive Load

ERIC Educational Resources Information Center

Seufert, Tina; Wagner, Felix; Westphal, Julia

2017-01-01

In some cases difficult-to-read learning materials lead to better performance than easy to-read materials. This phenomenon is called the disfluency effect and is attributed to a subjective feeling of task difficulty resulting in a deeper learning approach. In two studies (n[subscript 1] = 67, n[subscript 2] = 73) we investigated the impact of…

A lost generation of impact structures: Imaging the Arctic and Antarctic in magnetics and gravity

NASA Astrophysics Data System (ADS)

Purucker, M. E.

2017-12-01

The process of convection that drives plate tectonics has fragmented the early record on the continents, and subducted it in the oceans. Erosion blurs the upper surfaces of impact structures exposed to the atmosphere beyond recognition after a few million years. The largest confirmed impact structures on the Earth are Vredefort, Chicxulub, and Sudbury, with crater diameters averaging 150 km, and maximum ages of about 2 Ga. Contrast this with the situation at Mars or the Moon, where the largest confirmed impact structures have diameters of 2000 km, and ages of 4 Ga. The giant impact basins that form the most ancient, and most prominent, visible structures on the other terrestrial planets and moons have vanished on the Earth. Only with the use of techniques like magnetics and gravity is it possible to see deeper within the crust. We identify possible impact structure(s) in the Arctic and Antarctic in this way, and discuss techniques that can be used to confirm or refute these identifications.

The Possible Decapitation of a Megathrust Indenter: Evidence from Imaging of Time-dependent Microseismic Structures before and after the 2012 Mw 7.6 Nicoya, Costa Rica

NASA Astrophysics Data System (ADS)

Newman, A. V.; Yao, D.; Kyriakopoulos, C.; Moore-Driskell, M. M.; Hobbs, T. E.; Peng, Z.; Schwartz, S. Y.; Protti, M.; Gonzalez, V.

2016-12-01

We normally view the subduction megathrust surface as a constant structure throughout the seismic cycle, with the elastic loading, microseismicity, and slip occurring along it. However, using small events recorded from a uniquely dense seismic network directly over the active megathrust below Nicoya, Costa Rica, we find two different seismogenic structures with near exclusive time-dependent behavior immediately in the region of maximum coseismic slip. Microseismicity recorded at intervals between 1999 and 2009 showed an elevated topographic indenter beneath central Nicoya, and associated with a suture marking transition between Cocos-Nazca Spreading Center and East-Pacific Rise crusts [Kyriakopoulos et al., JGR 2015]. This indenter is located as a focus of interseismic locking and coseismic rupture [Feng et al., JGR 2012; Yue et al., JGR 2013; Protti et al., Nat. Geosc. 2014; Xue et al., JGR 2015; Kyriakopoulos & Newman, JGR 2016]. However, aftershocks recorded in the months following an MW 7.6 earthquake in 2012 define an entirely different structure about 5 km deeper and differing only in the area of maximum coseismic slip. The location of seismicity switches entirely between these faults from the shallow indenter structure beforehand to the deeper and near-linear feature after. To improve our imaging of the behavior and associated slab structure, we perform a detailed joint seismic relocation and tomographic inversion using TomoDD [Zhang and Thurber, PAGEOPH 2003]. We analyze the new locations relative to the imaged slab geometry, and compare automated formulations of the interfaces using the Maximum Seismicity Method [Kyriakopoulos et al., 2015], with data existing before and after the earthquake. Lastly, we show the sensitivity of using either surface in models for fault slip from regional GPS. We hypothesize that the bifurcated fault structure signifies either active decapitation of the indenter, possibly along the crust-mantle interface of the downgoing slab, or aftershock activity represents the true plate interface, with prior seismic activity dominantly in the hanging wall along a well-defined fault. Either case has implications for understanding the relationship between interseismic and coseismic fault behavior through the seismic cycle.

Large Scale Structure Studies: Final Results from a Rich Cluster Redshift Survey

NASA Astrophysics Data System (ADS)

Slinglend, K.; Batuski, D.; Haase, S.; Hill, J.

1995-12-01

The results from the COBE satellite show the existence of structure on scales on the order of 10% or more of the horizon scale of the universe. Rich clusters of galaxies from the Abell-ACO catalogs show evidence of structure on scales of 100 Mpc and hold the promise of confirming structure on the scale of the COBE result. Unfortunately, until now, redshift information has been unavailable for a large percentage of these clusters, so present knowledge of their three dimensional distribution has quite large uncertainties. Our approach in this effort has been to use the MX multifiber spectrometer on the Steward 2.3m to measure redshifts of at least ten galaxies in each of 88 Abell cluster fields with richness class R>= 1 and mag10 <= 16.8 (estimated z<= 0.12) and zero or one measured redshifts. This work has resulted in a deeper, 95% complete and more reliable sample of 3-D positions of rich clusters. The primary intent of this survey has been to constrain theoretical models for the formation of the structure we see in the universe today through 2-pt. spatial correlation function and other analyses of the large scale structures traced by these clusters. In addition, we have obtained enough redshifts per cluster to greatly improve the quality and size of the sample of reliable cluster velocity dispersions available for use in other studies of cluster properties. This new data has also allowed the construction of an updated and more reliable supercluster candidate catalog. Our efforts have resulted in effectively doubling the volume traced by these clusters. Presented here is the resulting 2-pt. spatial correlation function, as well as density plots and several other figures quantifying the large scale structure from this much deeper and complete sample. Also, with 10 or more redshifts in most of our cluster fields, we have investigated the extent of projection effects within the Abell catalog in an effort to quantify and understand how this may effect the Abell sample.

Evidence for Legacy Contamination of Nitrate in Groundwater of North Carolina Using Monitoring and Private Well Data Models

NASA Astrophysics Data System (ADS)

Messier, K. P.; Kane, E.; Bolich, R.; Serre, M. L.

2014-12-01

Nitrate (NO3-) is a widespread contaminant of groundwater and surface water across the United States that has deleterious effects to human and ecological health. Legacy contamination, or past releases of NO3-, is thought to be impacting current groundwater and surface water of North Carolina. This study develops a model for predicting point-level groundwater NO3- at a state scale for monitoring wells and private wells of North Carolina. A land use regression (LUR) model selection procedure known as constrained forward nonlinear regression and hyperparameter optimization (CFN-RHO) is developed for determining nonlinear model explanatory variables when they are known to be correlated. Bayesian Maximum Entropy (BME) is then used to integrate the LUR model to create a LUR-BME model of spatial/temporal varying groundwater NO3- concentrations. LUR-BME results in a leave-one-out cross-validation r2 of 0.74 and 0.33 for monitoring and private wells, effectively predicting within spatial covariance ranges. The major finding regarding legacy sources NO3- in this study is that the LUR-BME models show the geographical extent of low-level contamination of deeper drinking-water aquifers is beyond that of the shallower monitoring well. Groundwater NO3- in monitoring wells is highly variable with many areas predicted above the current Environmental Protection Agency standard of 10 mg/L. Contrarily, the private well results depict widespread, low-level NO3-concentrations. This evidence supports that in addition to downward transport, there is also a significant outward transport of groundwater NO3- in the drinking water aquifer to areas outside the range of sources. Results indicate that the deeper aquifers are potentially acting as a reservoir that is not only deeper, but also covers a larger geographical area, than the reservoir formed by the shallow aquifers. Results are of interest to agencies that regulate surface water and drinking water sources impacted by the effects of legacy NO3- sources. Additionally, the results can provide guidance on factors affecting the point-level variability of groundwater NO3- and areas where monitoring is needed to reduce uncertainty. Lastly, LUR-BME predictions can be integrated into surface water models for more accurate management of non-point sources of nitrogen.

Quality Training and Learning in Aviation: Problems of Alignment

NASA Technical Reports Server (NTRS)

Moore, Phillip J.; Lehrer, Henry R.; Telfer, Ross A.

2001-01-01

The challenge of producing training programs that lead to quality learning outcomes is ever present in aviation, especially when economic and regulatory pressures are brought into the equation. Previous research by Telfer & Moore (1997) indicates the importance of appropriate alignment of beliefs about learning across all levels of an organization from the managerial level, through the instructor/check and training level, to the pilots and other crew. This paper argues for a central focus on approaches to learning and training that encourage understanding, problem solving and application. Recent research in the area is emphasized as are methods and techniques for enhancing deeper learning.

Shifts in phylogenetic diversity of archaeal communities in mangrove sediments at different sites and depths in southeastern Brazil.

PubMed

Mendes, Lucas William; Taketani, Rodrigo Gouvêa; Navarrete, Acácio Aparecido; Tsai, Siu Mui

2012-06-01

This study focused on the structure and composition of archaeal communities in sediments of tropical mangroves in order to obtain sufficient insight into two Brazilian sites from different locations (one pristine and another located in an urban area) and at different depth levels from the surface. Terminal restriction fragment length polymorphism (T-RFLP) of PCR-amplified 16S rRNA gene fragments was used to scan the archaeal community structure, and 16S rRNA gene clone libraries were used to determine the community composition. Redundancy analysis of T-RFLP patterns revealed differences in archaeal community structure according to location, depth and soil attributes. Parameters such as pH, organic matter, potassium and magnesium presented significant correlation with general community structure. Furthermore, phylogenetic analysis revealed a community composition distributed differently according to depth where, in shallow samples, 74.3% of sequences were affiliated with Euryarchaeota and 25.7% were shared between Crenarchaeota and Thaumarchaeota, while for the deeper samples, 24.3% of the sequences were affiliated with Euryarchaeota and 75.7% with Crenarchaeota and Thaumarchaeota. Archaeal diversity measurements based on 16S rRNA gene clone libraries decreased with increasing depth and there was a greater difference between depths (<18% of sequences shared) than sites (>25% of sequences shared). Taken together, our findings indicate that mangrove ecosystems support a diverse archaeal community; it might possibly be involved in nutrient cycles and are affected by sediment properties, depth and distinct locations. Copyright © 2012 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Seismic structure and stratigraphy of northern edge of Bahaman-Cuban collision zone

USGS Publications Warehouse

Ball, M.M.; Martin, R.G.; Bock, W.D.; Sylwester, R.E.; Bowles, R.M.; Taylor, D.; Coward, E.L.; Dodd, J.E.; Gilbert, L.

1985-01-01

Common-depth-point (CDP) seismic reflection data in the southwestern Bahamas reveal the northern edge of the tectonized zone that resulted from the late Mesozoic-early Cenozoic collision of Cuba and the Bahamas. Two seismic facies are present. A 10-km broad anticline occurs at the south end of Santaren Channel. Platform carbonates in the core of this structure overlie Early Cretaceous and older basinal carbonate deposits and are onlapped by Late Cretaceous and Cenozoic basinal facies. The structure is inferred to be a hanging-wall anticline at the northern limit of the Cuban fold-thrust belt formed in the Late Cretaceous. A deeper water embayment extended northward into the Straits of Florida, around northern Cay Sal Bank, and back into Santaren Channel during the Early Cretaceous.

On magnetic structure of CuFe 2Ge 2: Constrains from the 57Fe Mössbauer spectroscopy

DOE PAGES

Bud’ko, Sergey L.; Jo, Na Hyun; Downing, Savannah S.; ...

2017-09-20

57Fe Mössbauer spectroscopy measurements were performed on a powdered CuFe 2Ge 2 sample that orders antiferromagnetically at ~175 K. Whereas a paramagnetic doublet was observed above the Néel temperature, a superposition of paramagnetic doublet and magnetic sextet (in approximately 0.5:0.5 ratio) was observed in the magnetically ordered state, suggesting a magnetic structure similar to a double-Q spin density wave with half of the Fe paramagnetic and another half bearing static moment of ~0.5–1μ B. Lastly, these results call for a re-evaluation of the recent neutron scattering data and band structure calculations, as well as for deeper examination of details ofmore » sample preparation techniques.« less

Human development I: twenty fundamental problems of biology, medicine, and neuro-psychology related to biological information.

PubMed

Hermansen, Tyge Dahl; Ventegodt, Søren; Rald, Erik; Clausen, Birgitte; Nielsen, Maj Lyck; Merrick, Joav

2006-07-06

In a new series of papers, we address a number of unsolved problems in biology today. First of all, the unsolved enigma concerning how the differentiation from a single zygote to an adult individual happens has been object for severe research for decades. By uncovering a new holistic biological paradigm that introduces an energetic-informational interpretation of reality as a new way to experience biology, these papers will try to solve the problems connected with the events of biological ontogenesis involving a fractal hierarchy, from a single cell to the function of the human brain. The problems discussed are interpreted within the frames of a universe of roomy fractal structures containing energetic patterns that are able to deliver biological information. We think biological organization is guided by energetic changes on the level of quantum mechanics, interacting with the intention that again guides the energetic conformation of the fractal structures to gain disorders or healthiness. Furthermore, we introduce two new concepts: "metamorphous top down" evolution and "adult human metamorphosis". The first is a new evolutionary theory involving metamorphosis as a main concept of evolution. The last is tightly linked to the evolutionary principle and explains how human self-recovery is governed. Other subjects of special interest that we shall look deeper into are the immunological self-nonself discrimination, the structure and function of the human brain, the etiology and salutogenesis of mental and somatic diseases, and the structure of the consciousness of a human being. We shall criticize Szentagothai's model for the modulated structure of the human cerebral cortex and Jerne's theory of the immunological regulatory anti-idiotypic network.

From the Biochemistry of Tubulin to the Biophysics of Microtubules

NASA Astrophysics Data System (ADS)

Brown, J. A.; Tuszyński, J. A.

2001-09-01

Mirotubules (MTs) are protein polymers of the cytoskeleton that once fully understood will provide a deeper understanding of many cell functions. Assembly dynamics with the characteristic dynamic instability phenomenon has been intensively investigated over the past two decades and several models have been developed which adequately describe this phenomenon. Since the tubulin structure was imaged by Nogales and Downing, the dipole has been calculated and also the charge distribution on the surface of the protein together with a hydrophobicity plot. However, it still remains to be seen how the dipole changes upon the conformational change due to GTP hydrolysis. Furthermore, the contribution of the carboxyl terminus to the dipolar and electrostatic properties has not been accounted for. Using the crystallographic data of Nogales and Downing, some properties of the new structure of tubulin were examined. The so called multi-tubulin hypothesis seems to be explained by the differences in the electrostatic potentials produced by various tubulin isotypes produced by only several amino-acid substitutions. Such small changes in the tubulin structure may render the MTs less susceptible to naturally occurring agents which would otherwise bind them and impair their function. The hypothesis of electrostatic binding between protofilaments seems to be well founded. The MT structure has been compared with the previous work, to comment on models of motor protein movement and to consider how isotype changes affect the electrostatic potential surrounding the MT. The nature of binding between the MT and motor proteins also seems to be electrostatic and can be used to explain the stepping of these motors along the MT surface. The overall picture emerging from these studies is that the tubulin's molecular structure and the ensuing microtubular architecture can provide a microscopic-level understanding of the biological function in the cell.

Subtidal sea level variability in a shallow Mississippi River deltaic estuary, Louisiana

USGS Publications Warehouse

Snedden, G.A.; Cable, J.E.; Wiseman, W.J.

2007-01-01

The relative roles of river, atmospheric, and tidal forcings on estuarine sea level variability are examined in Breton Sound, a shallow (0.7 m) deltaic estuary situated in an interdistributary basin on the Mississippi River deltaic plain. The deltaic landscape contains vegetated marshes, tidal flats, circuitous channels, and other features that frictionally dissipate waves propagating through the system. Direct forcing by local wind stress over the surface of the estuary is minimal, owing to the lack of significant fetch due to landscape features of the estuary. Atmospheric forcing occurs almost entirely through remote forcing, where alongshore winds facilitate estuary-shelf exchange through coastal Ekman convergence. The highly frictional nature of the deltaic landscape causes the estuary to act as a low-pass filter to remote atmospheric forcing, where high-frequency, coastally-induced fluctuations are significantly damped, and the damping increases with distance from the estuary mouth. During spring, when substantial quantities of controlled Mississippi River inputs (q?? = 62 m3 s-1) are discharged into the estuary, upper estuary subtidal sea levels are forced by a combination of river and remote atmospheric forcings, while river effects are less clear downestuary. During autumn (q?? = 7 m3 s-1) sea level variability throughout the estuary is governed entirely by coastal variations at the marine boundary. A frequency-dependent analytical model, previously used to describe sea level dynamics forced by local wind stress and coastal forcing in deeper, less frictional systems, is applied in the shallow Breton Sound estuary. In contrast to deeper systems where coastally-induced fluctuations exhibit little or no frictional attenuation inside the estuary, these fluctuations in the shallow Breton Sound estuary show strong frequency-dependent amplitude reductions that extend well into the subtidal frequency spectrum. ?? 2007 Estuarine Research Federation.

Systematic hydrogeological study of a hypothermal spring (S. Cesarea Terme, Apulia), Italy

NASA Astrophysics Data System (ADS)

Calò, Giuseppe Cesario; Tinelli, Roccaldo

1995-02-01

A long series of thermo-saline logging has been carried out in wells drilled through the Mesozoic carbonate aquifer from which the sulfur hypothermal springs of S. Cesarea Terme issue. The logging conducted at various timings (i.e. periodically, rapidly sequenced, synchronized with tides and sea conditions), over about 10 years, provides valuable data on the thermal and hydrological regimen of the area. In particular for the inshore zone, both isotherm and thermal gradient trends could be determined, and a close identification of preferential levels through which groundwater discharge takes place was possible. In fact, flow velocity measurements, made by the point diluition method, showed a mostly impervious aquifer except for evident fissured levels through which low-velocity discharge (5-22 cm day -1) takes place. When the sea is low and calm, all levels are influenced by sulfur waters except for the uppermost unconfined zone. When the sea is rough, also owing to the low permeability of the aquifer, a barrier effect against groundwater flow is triggered. Since groundwater is prevented from discharging, it tends to reach deeper permeable levels, thus markedly altering the hydrological and thermal regimen of the deeper sulfur waters. The lithological character of aquifers and their low permeability are confirmed by 222Rn contents (normally 10-15 pCi l -1), groundwater reaching 200 pCi l -1), only at levels where water starts becoming hot. This phenomenon, as supported by all investigations including those on sulfides, occurs only at temperatures exceeding 23°C. Therefore, according to the above investigation, the S. Cesarea springs represent a unique hydraulic model, matching real hydrodynamic situations occurring when surrounding conditions change.

Changes in the electroencephalogram during anaesthesia and their physiological basis.

PubMed

Hagihira, S

2015-07-01

The use of EEG monitors to assess the level of hypnosis during anaesthesia has become widespread. Anaesthetists, however, do not usually observe the raw EEG data: they generally pay attention only to the Bispectral Index (BIS™) and other indices calculated by EEG monitors. This abstracted information only partially characterizes EEG features. To properly appreciate the availability and reliability of EEG-derived indices, it is necessary to understand how raw EEG changes during anaesthesia. With hemi-frontal lead EEGs obtained under volatile anaesthesia or propofol anaesthesia, the dominant EEG frequency decreases and the amplitude increases with increasing concentrations of anaesthetic. Looking more closely, the EEG changes are more complicated. At surgical concentrations of anaesthesia, spindle waves (alpha range) become dominant. At deeper levels, this activity decreases, and theta and delta waves predominate. At even deeper levels, EEG waveform changes into a burst and suppression pattern, and finally becomes flat. EEG waveforms vary in the presence of noxious stimuli (surgical skin incision), which is not always reflected in BIS™, or other processed EEG indices. Spindle waves are adequately sensitive, however, to noxious stimuli: under surgical anaesthesia they disappear when noxious stimuli are applied, and reappear when adequate analgesia is obtained. To prevent awareness during anaesthesia, I speculate that the most effective strategy is to administer anaesthetic agents in such a way as to maintain anaesthesia at a level where spindle waves predominate. © The Author 2015. Published by Oxford University Press on behalf of the British Journal of Anaesthesia. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Sources of high-chloride water and managed aquifer recharge in an alluvial aquifer in California, USA

USGS Publications Warehouse

O'Leary, David; Izbicki, John A.; Metzger, Loren F.

2015-01-01

As a result of pumping in excess of recharge, water levels in alluvial aquifers within the Eastern San Joaquin Groundwater Subbasin, 130 km east of San Francisco (California, USA), declined below sea level in the early 1950s and have remained so to the present. Chloride concentrations in some wells increased during that time and exceeded the US Environmental Protection Agency’s secondary maximum contaminant level of 250 mg/L, resulting in removal of some wells from service. Sources of high-chloride water include irrigation return in 16 % of sampled wells and water from delta sediments and deeper groundwater in 50 % of sampled wells. Chloride concentrations resulting from irrigation return commonly did not exceed 100 mg/L, although nitrate concentrations were as high as 25 mg/L as nitrogen. Chloride concentrations ranged from less than 100–2,050 mg/L in wells affected by water from delta sediments and deeper groundwater. Sequential electromagnetic logs show movement of high-chloride water from delta sediments to pumping wells through permeable interconnected aquifer layers. δD and δ18O data show most groundwater originated as recharge along the front of the Sierra Nevada, but tritium and carbon-14 data suggest recharge rates in this area are low and have decreased over recent geologic time. Managed aquifer recharge at two sites show differences in water-level responses to recharge and in the physical movement of recharged water with depth related to subsurface geology. Well-bore flow logs also show rapid movement of water from recharge sites through permeable interconnected aquifer layers to pumping wells.

Satellite-derived attributes of cloud vortex systems and their application to climate studies

NASA Technical Reports Server (NTRS)

Carleton, Andrew M.

1987-01-01

Defense Meteorological Satellite Program (DMSP) visible and infrared mosaics are analyzed in conjunction with synoptic meteorological observations of sea level pressure (SLP) and upper-air height to derive composite patterns of cyclonic cloud vortices for the Northern Hemisphere. The patterns reveal variations in the structure and implied dynamics of cyclonic systems at different stages of development that include: (1) increasing vertical symmetry of the lower-level and upper-air circulations and (2) decreasing lower-tropospheric thicknesses and temperature advection, associated with increasing age of the vortex. Cloud vortices are more intense in winter than in summer and typically reach maximum intensity in the short-lived prespiral signature stage. There are major structural differences among frontal wave, polar air, and 'instant occlusion' cyclogenesis types. Cyclones in the dissipation stage may reintensify (deepen), as denoted by the appearance in the imagery of an asymmetric cloud band or a tightened spiral vortex. The satellite-derived statistics on cloud vortex intensity, which are seasonal- and latitude- as well as type-dependent, are applied to a preliminary examination of the synoptic manifestations of seasonal climate variability. An apparently close relationship is found, for two winter and spring seasons, between Northern Hemisphere cyclonic activity and variations in cryosphere variables, particularly the extent of Arctic sea ice. The results may indicate that increased snow and ice extent accompany a southward displacement of cyclonic activity and/or a predominance of deeper systems. However, there is also a strong regional dependence to the ice-synoptics feedback. This study demonstrates the utility of high resolution meteorological satellite imagery for studies of climate variations (climate dynamics).

Fungal community dynamics during a marine dinoflagellate (Noctiluca scintillans) bloom.

PubMed

Sun, Jing-Yun; Song, Yu; Ma, Zhi-Ping; Zhang, Huai-Jing; Yang, Zhong-Duo; Cai, Zhong-Hua; Zhou, Jin

2017-10-01

Contamination and eutrophication have caused serious ecological events (such as algal bloom) in coastal area. During this ecological process, microbial community structure is critical for algal bloom succession. The diversity and composition of bacteria and archaea communities in algal blooms have been widely investigated; however, those of fungi are poorly understood. To fill this gap, we used pyrosequencing and correlation approaches to assess fungal patterns and associations during a dinoflagellate (Noctiluca scintillans) bloom. Phylum level fungal types were predominated by Ascomycota, Chytridiomycota, Mucoromycotina, and Basidiomycota. At the genus level drastic changes were observed with Hysteropatella, Malassezia and Saitoella dominating during the initial bloom stage, while Malassezia was most abundant (>50%) during onset and peak-bloom stages. Saitoella and Lipomyces gradually became more abundant and, in the decline stage, contributed almost 70% of sequences. In the terminal stage of the bloom, Rozella increased rapidly to a maximum of 50-60%. Fungal population structure was significantly influenced by temperature and substrate (N and P) availability (P < 0.05). Inter-specific network analyses demonstrated that Rozella and Saitoella fungi strongly impacted the ecological trajectory of N. scintillans. The functional prediction show that symbiotrophic fungi was dominated in the onset stage; saprotroph type was the primary member present during the exponential growth period; whereas pathogentroph type fungi enriched in decline phase. Overall, fungal communities and functions correlated significantly with N. scintillans processes, suggesting that they may regulate dinoflagellate bloom fates. Our results will facilitate deeper understanding of the ecological importance of marine fungi and their roles in algal bloom formation and collapse. Copyright © 2017 Elsevier Ltd. All rights reserved.

A Multi-Level Theoretical Study to Disclose the Binding Mechanisms of Gold(III)-Bipyridyl Compounds as Selective Aquaglyceroporin Inhibitors.

PubMed

Graziani, Valentina; Marrone, Alessandro; Re, Nazzareno; Coletti, Cecilia; Platts, James A; Casini, Angela

2017-10-04

Structural studies have paved the avenue to a deeper understanding of aquaporins (AQPs), small ancient proteins providing efficient transmembrane pathways for water, small uncharged solutes such as glycerol, and possibly gas molecules. Despite the numerous studies, their roles in health and disease remain to be fully disclosed. The recent discovery of Au III complexes as potent and selective inhibitors of aquaglyceroporin isoforms paves the way to their possible therapeutic application. The binding of the selective human AQP3 inhibitor, the cationic complex [Au(bipy)Cl 2 ] + (Aubipy), to the protein channel has been investigated here by means of a multi-level theoretical workflow that includes QM, MD and QM/MM approaches. The hydroxo complex was identified as the prevalent form of Aubipy in physiological media and its binding to AQP3 studied by MD. Both non-covalent and coordinative Aubipy-AQP3 adducts were simulated to probe their role in the modulation of water channel functionality. The electronic structures of representative Aubipy-AQP3 adducts were then analysed to unveil the role played by the metal moiety in their stabilisation. This study spotlights the overall importance of three key aspects for AQP3 inhibition: 1) water speciation of the Au III complex, 2) stability of non-covalent adducts and 3) conformational changes induced within the pore by the coordinative binding of Au III . The obtained results are expected to orient future developments in the design of isoform-selective Au III inhibitors. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Helical structure of the cardiac ventricular anatomy assessed by diffusion tensor magnetic resonance imaging with multiresolution tractography.

PubMed

Poveda, Ferran; Gil, Debora; Martí, Enric; Andaluz, Albert; Ballester, Manel; Carreras, Francesc

2013-10-01

Deeper understanding of the myocardial structure linking the morphology and function of the heart would unravel crucial knowledge for medical and surgical clinical procedures and studies. Several conceptual models of myocardial fiber organization have been proposed but the lack of an automatic and objective methodology prevented an agreement. We sought to deepen this knowledge through advanced computer graphical representations of the myocardial fiber architecture by diffusion tensor magnetic resonance imaging. We performed automatic tractography reconstruction of unsegmented diffusion tensor magnetic resonance imaging datasets of canine heart from the public database of the Johns Hopkins University. Full-scale tractographies have been built with 200 seeds and are composed by streamlines computed on the vector field of primary eigenvectors at the diffusion tensor volumes. We also introduced a novel multiscale visualization technique in order to obtain a simplified tractography. This methodology retains the main geometric features of the fiber tracts, making it easier to decipher the main properties of the architectural organization of the heart. Output analysis of our tractographic representations showed exact correlation with low-level details of myocardial architecture, but also with the more abstract conceptualization of a continuous helical ventricular myocardial fiber array. Objective analysis of myocardial architecture by an automated method, including the entire myocardium and using several 3-dimensional levels of complexity, reveals a continuous helical myocardial fiber arrangement of both right and left ventricles, supporting the anatomical model of the helical ventricular myocardial band described by F. Torrent-Guasp. Copyright © 2013 Sociedad Española de Cardiología. Published by Elsevier Espana. All rights reserved.

Time-dependent structural transformation analysis to high-level Petri net model with active state transition diagram

PubMed Central

2010-01-01

Background With an accumulation of in silico data obtained by simulating large-scale biological networks, a new interest of research is emerging for elucidating how living organism functions over time in cells. Investigating the dynamic features of current computational models promises a deeper understanding of complex cellular processes. This leads us to develop a method that utilizes structural properties of the model over all simulation time steps. Further, user-friendly overviews of dynamic behaviors can be considered to provide a great help in understanding the variations of system mechanisms. Results We propose a novel method for constructing and analyzing a so-called active state transition diagram (ASTD) by using time-course simulation data of a high-level Petri net. Our method includes two new algorithms. The first algorithm extracts a series of subnets (called temporal subnets) reflecting biological components contributing to the dynamics, while retaining positive mathematical qualities. The second one creates an ASTD composed of unique temporal subnets. ASTD provides users with concise information allowing them to grasp and trace how a key regulatory subnet and/or a network changes with time. The applicability of our method is demonstrated by the analysis of the underlying model for circadian rhythms in Drosophila. Conclusions Building ASTD is a useful means to convert a hybrid model dealing with discrete, continuous and more complicated events to finite time-dependent states. Based on ASTD, various analytical approaches can be applied to obtain new insights into not only systematic mechanisms but also dynamics. PMID:20356411

Convective Cold Pool Structure and Boundary Layer Recovery in DYNAMO

NASA Astrophysics Data System (ADS)

Savarin, A.; Chen, S. S.; Kerns, B. W.; Lee, C.; Jorgensen, D. P.

2012-12-01

One of the key factors controlling convective cloud systems in the Madden-Julian Oscillation (MJO) over the tropical Indian Ocean is the property of the atmospheric boundary layer. Convective downdrafts and precipitation from the cloud systems produce cold pools in the boundary layer, which can inhibit subsequent development of convection. The recovery time is the time it takes for the boundary layer to return to pre convective conditions. It may affect the variability of the convection on various time scales during the initiation of MJO. This study examines the convective cold pool structure and boundary layer recovery using the NOAA WP-3D aircraft observations, include the flight-level, Doppler radar, and GPS dropsonde data, collected during the Dynamics of MJO (DYNAMO) field campaign from November-December 2011. The depth and strength of convective cold pools are defined by the negative buoyancy, which can be computed from the dropsonde data. Convective downdraft can be affected by environmental water vapor due to entrainment. Mid-level dry air observed during the convectively suppressed phase of MJO seems to enhance convective downdraft, making the cold pools stronger and deeper. Recovery of the cold pools in the boundary layer is determined by the strength and depth of the cold pools and also the air-sea heat and moisture fluxes. Given that the water vapor and surface winds are distinct for the convectively active and suppressed phases of MJO over the Indian Ocean, the aircraft data are stratified by the two different large-scale regimes of MJO. Preliminary results show that the strength and depth of the cold pools are inversely correlated with the surrounding mid-level moisture. During the convectively suppressed phase, the recovery time is ~5-20 hours in relative weak wind condition with small air-sea fluxes. The recovery time is generally less than 6 hours during the active phase of MJO with moist mid-levels and stronger surface wind and air-sea fluxes.

Interactions between soil texture, water, and nutrients control patterns of biocrusts abundance and structure

NASA Astrophysics Data System (ADS)

Young, Kristina; Bowker, Matthew; Reed, Sasha; Howell, Armin

2017-04-01

Heterogeneity in the abiotic environment structures biotic communities by controlling niche space and parameters. This has been widely observed and demonstrated in vascular plant and other aboveground communities. While soil organisms are presumably also strongly influenced by the physical and chemical dimensions of the edaphic environment, there are fewer studies linking the development, structure, productivity or function of surface soil communities to specific edaphic gradients. Here, we use biological soil crusts (biocrusts) as a model system to determine mechanisms regulating community structure of soil organisms. We chose soil texture to serve as an edaphic gradient because of soil texture's influence over biocrust distribution on a landscape level. We experimentally manipulated texture in constructed soil, and simultaneously manipulated two main outcomes of texture, water and nutrient availability, to determine the mechanism underlying texture's influence on biocrust abundance and structure. We grew biocrust communities from a field-sourced inoculum on four different soil textures, sieved from the same parent soil material, manipulating watering levels and nutrient additions across soil textures in a full-factorial design over a 5-month period of time. We measured abundance and structure of biocrusts over time, and measured two metrics of function, N2 fixation rates and soil stabilization, at the conclusion of the experiment. Our results showed finer soil textures resulted in faster biocrust community development and dominance by mosses, whereas coarser textures grew more slowly and had biocrust communities dominated by cyanobacteria and lichen. Additionally, coarser textured soils contained cyanobacterial filaments significantly deeper into the soil profile than fine textured soils. N2-fixation values increased with increasing moss cover and decreased with increasing cyanobacterial cover, however, the rate of change depended on soil texture and water amount. Soil shear resistance was highest on finer textured soil with the highest watering treatment, whereas compression resistance was highest on the coarsest textured soils with the highest watering amounts. Nutrient addition did not influence total cover or biocrust function, but did decrease lichen cover. Taken together, these results suggest that interactions between soil texture, water, and to a lesser degree nutrients, create predictable patterns in biocrust assemblage and offers a mechanistic understanding of edaphic controls over biocrust abundance and structure. These insights add to our increasing understanding of how edaphic gradients structure soil communities.

An Added Layer of Support: Introducing a Heterarchical Peer Mentoring Intervention to a Preservice Science Teacher Education Cohort

NASA Astrophysics Data System (ADS)

Neesemann, Lisa Ann

In an effort to support preservice science teachers during their concurrent student teaching experiences and masters coursework, I created and implemented a Peer Mentoring Intervention to add an additional layer of support to those most traditionally curated. In this intervention, preservice secondary science teachers were paired into heterarchical (as contrasted with hierarchical) mentoring groups, instructed in norms of collaboration and given class time to work as dyads offering support and feedback to one another. During the three-semester span of the intervention data was collected in many forms, such as prompted journal entries, course assignments and semi-structured interviews. Qualitative findings are reported and the case study of one dyad is also presented. Findings included concerns and solutions regarding relating to the assigned peer, developing academic and organizational skills, navigating and learning to appreciate different layers of support, a deeper level of reflection, varying levels of commitment to social justice, and realized self-efficacy. Next steps include refining and implementing the program with a new cohort of students as well as following the participants as they move forward in their teaching careers as well as rethinking the role of mentorship to realize equality among members and challenge the traditionally established hierarchies in mentor relationships.

Brittle extension of the continental crust along a rooted system of low-angle normal faults: Colorado River extensional corridor

NASA Technical Reports Server (NTRS)

John, B. E.; Howard, K. A.

1985-01-01

A transect across the 100 km wide Colorado River extensional corridor of mid-Tertiary age shows that the upper 10 to 15 km of crystalline crust extended along an imbricate system of brittle low-angle normal faults. The faults cut gently down a section in the NE-direction of tectonic transport from a headwall breakaway in the Old Woman Mountains, California. Successively higher allochthons above a basal detachment fault are futher displaced from the headwall, some as much as tens of kilometers. Allochthonous blocks are tilted toward the headwall as evidenced by the dip of the cappoing Tertiary strata and originally horizontal Proterozoic diabase sheets. On the down-dip side of the corridor in Arizona, the faults root under the unbroken Hualapai Mountains and the Colorado Plateau. Slip on faults at all exposed levels of the crust was unidirectional. Brittle thinning above these faults affected the entire upper crust, and wholly removed it locally along the central corridor or core complex region. Isostatic uplift exposed metamorphic core complexes in the domed footwall. These data support a model that the crust in California moved out from under Arizona along an asymmetric, rooted normal-slip shear system. Ductile deformation must have accompanied mid-Tertiary crustal extension at deeper structural levels in Arizona.

Direct observation of strain localization along the differentially exhumed SEMP fault system, Austria

NASA Astrophysics Data System (ADS)

Frost, E.; Dolan, J. F.; Hacker, B. R.; Ratschbacher, L.; Sammis, C. G.; Seward, G.; Cole, J.

2009-12-01

Structural analysis of key outcrops from ~5 to ~25 km exhumation depth along the Salzach-Ennstal-Mariazell-Puchberg (SEMP) fault-zone in Austria reveal highly localized deformation in the seismogenic crust down through the brittle-ductile transition (BDT), widening into a 2-km-wide mylonite at mid-crustal levels. Specifically, grain-size distribution analysis of brittley-deformed dolomite exhumed from the seismogenic crust reveals that strain progressively localized into a 10-m-wide fault core. Microstructural analysis of marbles and greywackes exhumed from the BDT shows off-fault ductile deformation only accommodated a minor portion of the displacement along the SEMP, with most of the strain localized along the contact between these two units. Similar analysis of gneisses and amphibolite-facies metasediments exhumed from just below the BDT shows that at this depth, the majority of displacement is focused into a 100-m-wide ductile shear zone, with further evidence for strain localization along grain boundaries, creating throughgoing shear zones at the grain-scale. At deeper exhumation levels (Rosenberg and Schneider, 2008), the SEMP is a 1-2-km-wide mylonite zone that extends to depths of at least 25 km. Collectively, these data indicate that slip along the SEMP was highly localized from throughout the seismogenic crust downward into at least the mid-crust.

Shifted energy fluxes, increased Bowen ratios, and reduced thaw depths linked with drainage-induced changes in permafrost ecosystem structure

NASA Astrophysics Data System (ADS)

Göckede, Mathias; Kittler, Fanny; Kwon, Min Jung; Burjack, Ina; Heimann, Martin; Kolle, Olaf; Zimov, Nikita; Zimov, Sergey

2017-12-01

Hydrologic conditions are a key factor in Arctic ecosystems, with strong influences on ecosystem structure and related effects on biogeophysical and biogeochemical processes. With systematic changes in water availability expected for large parts of the northern high-latitude region in the coming centuries, knowledge on shifts in ecosystem functionality triggered by altered water levels is crucial for reducing uncertainties in climate change predictions. Here, we present findings from paired ecosystem observations in northeast Siberia comprising a drained and a control site. At the drainage site, the water table has been artificially lowered by up to 30 cm in summer for more than a decade. This sustained primary disturbance in hydrologic conditions has triggered a suite of secondary shifts in ecosystem properties, including vegetation community structure, snow cover dynamics, and radiation budget, all of which influence the net effects of drainage. Reduced thermal conductivity in dry organic soils was identified as the dominating drainage effect on energy budget and soil thermal regime. Through this effect, reduced heat transfer into deeper soil layers leads to shallower thaw depths, initially leading to a stabilization of organic permafrost soils, while the long-term effects on permafrost temperature trends still need to be assessed. At the same time, more energy is transferred back into the atmosphere as sensible heat in the drained area, which may trigger a warming of the lower atmospheric surface layer.

Structural characterization of core-bradavidin in complex with biotin

PubMed Central

Agrawal, Nitin; Määttä, Juha A. E.; Kulomaa, Markku S.; Hytönen, Vesa P.; Johnson, Mark S.; Airenne, Tomi T.

2017-01-01

Bradavidin is a tetrameric biotin-binding protein similar to chicken avidin and bacterial streptavidin, and was originally cloned from the nitrogen-fixing bacteria Bradyrhizobium diazoefficiens. We have previously reported the crystal structure of the full-length, wild-type (wt) bradavidin with 138 amino acids, where the C-terminal residues Gly129-Lys138 (“Brad-tag”) act as an intrinsic ligand (i.e. Gly129-Lys138 bind into the biotin-binding site of an adjacent subunit within the same tetramer) and has potential as an affinity tag for biotechnological purposes. Here, the X-ray structure of core-bradavidin lacking the C-terminal residues Gly114-Lys138, and hence missing the Brad-tag, was crystallized in complex with biotin at 1.60 Å resolution [PDB:4BBO]. We also report a homology model of rhodavidin, an avidin-like protein from Rhodopseudomonas palustris, and of an avidin-like protein from Bradyrhizobium sp. Ai1a-2, both of which have the Brad-tag sequence at their C-terminus. Moreover, core-bradavidin V1, an engineered variant of the original core-bradavidin, was also expressed at high levels in E. coli, as well as a double mutant (Cys39Ala and Cys69Ala) of core-bradavidin (CC mutant). Our data help us to further engineer the core-bradavidin–Brad-tag pair for biotechnological assays and chemical biology applications, and provide deeper insight into the biotin-binding mode of bradavidin. PMID:28426764

The impact of glacier meltwater on the underwater noise field in a glacial bay

NASA Astrophysics Data System (ADS)

Glowacki, Oskar; Moskalik, Mateusz; Deane, Grant B.

2016-12-01

Ambient noise oceanography is proving to be an efficient and effective tool for the study of ice-ocean interactions in the bays of marine-terminating glaciers. However, obtaining quantitative estimates of ice melting or calving processes from ambient noise requires an understanding of how sound propagation through the bay attenuates and filters the noise spectrum. Measurements of the vertical structure in sound speed in the vicinity of the Hans Glacier in Hornsund Fjord, Spitsbergen, made with O(130) CTD casts between May and November 2015, reveal high-gradient, upward-refracting sound speed profiles created by cold, fresh meltwater during summer months. Simultaneous recordings of underwater ambient noise made at depths of 1, 10, and 20 m in combination with propagation model calculations using the model Bellhop illustrate the dominant role these surface ducts play in shaping the underwater soundscape. The surface ducts lead to a higher intensity and greater variability of acoustic energy in the near-surface layer covered by glacially modified waters relative to deeper waters, indicating deeper zones as most appropriate for interseasonal acoustic monitoring of the glacial melt. Surface waveguides in Hornsund are relatively shallow and trap sound above O(1 kHz). Deeper waveguides observed elsewhere will also trap low-frequency sounds, such as those generated by calving events for example. Finally, the ambient noise field in Hornsund is shown to be strongly dependent on the distribution of ice throughout the bay, stressing the importance of performing complementary environmental measurements when interpreting the results of acoustic surveys.

Microgravity changes at the Laguna del Maule volcanic field: Magma-induced stress changes facilitate mass addition

NASA Astrophysics Data System (ADS)

Miller, C. A.; Le Mével, H.; Currenti, G.; Williams-Jones, G.; Tikoff, B.

2017-04-01

Time-dependent, or 4-D, microgravity changes observed at the Laguna del Maule volcanic field, Chile, since 2013, indicate significant (1.5 × 1011 kg) ongoing mass injection. Mass injection is focused along the Troncoso fault, and subparallel structures beneath the lake at 1.5-2 km depth, and is best modeled by a vertical rectangular prism source. The low-density change (156 to 307 kg/m3) and limited depth extent suggest a mechanism of hydrothermal fluid intrusion into existing voids, or voids created by the substantial uplift, rather than deeper-sourced dike intrusion of rhyolite or basalt magma. Although the gravity changes are broadly spatially coincident with ongoing surface deformation, existing models that explain the deformation are deeper sourced and cannot explain the gravity changes. To account for this discrepancy and the correspondence in time of the deformation and gravity changes, we explore a coupled magmatectonic interaction mechanism that allows for shallow mass addition, facilitated by deeper magma injection. Computing the strain, and mean, normal, and Coulomb stress changes on northeast trending faults, caused by the opening of a sill at 5 km depth, shows an increase in strain and mean and normal stresses along these faults, coincident with the areas of mass addition. Seismic swarms in mid-2012 to the west and southwest of the mass intrusion area may be responsible for dynamically increasing permeability on the Troncoso fault, promoting influx of hydrothermal fluids, which in turn causes larger gravity changes in the 2013 to 2014 interval, compared to the subsequent intervals.

Creative inventive design and research

NASA Astrophysics Data System (ADS)

Kerley, James J.

1994-06-01

This paper is a summary of a course given at the Goddard Space Flight Center for graduate engineers entitled 'Creative Inventive Design and Research.' This course strikes at the heart of the problem as it describes the thinking process itself before it goes deeper into the design process as a structured method for performing creative design. Many problem examples and figures are presented in a form that should make clear to all students what this process is and how it can be used.

Evolution of Overlapping Spreading Centers: A SeaMARC II Investigation

DTIC Science & Technology

1990-06-07

Rhode Island , Narragansett, RI 02882 During a major SeaMARC II expedition in May-June 1987 we happed all the overlapping spreading centers (OSCs) north...Macdonald, 1988, The structural anatomy of the Clipperton and Orozco fracture zones: Sea Beam and SeaMARC II data, EOS Trans., Amer. Geophys. Union...raphy at the University of Rhode Island . most of them are deeper and less ing. Other workers further refined and in 1i.,72 he earned his Ph.D. in marine

Femtosecond dynamics of monolayer MoS2-Ag nanoparticles hybrid probed at 532 nm

NASA Astrophysics Data System (ADS)

Xu, Xuefeng; Shi, Ying; Liu, Xiaochun; Sun, Mengtao

2018-01-01

In this communication, plasmon-exciton couplings of monolayer MoS2/Ag nanoparticles (NPs) hybrids with different sizes are investigated, using transient absorption spectra. Ultrafast dynamics of coupling interactions inside these hybrid structures are carefully examined at 532 nm, which can well interpret the apllication of plasmon-exciton coupling for the co-driven chemical reactions excited at 532 nm. Our experimental results can promote the deeper understanding on the physical mechanism of plasmon-excition interaction, and applications in different fields.

Use of activity theory-based need finding for biomedical device development.

PubMed

Rismani, Shalaleh; Ratto, Matt; Machiel Van der Loos, H F

2016-08-01

Identifying the appropriate needs for biomedical device design is challenging, especially for less structured environments. The paper proposes an alternate need-finding method based on Cultural Historical Activity Theory and expanded to explicitly examine the role of devices within a socioeconomic system. This is compared to a conventional need-finding technique in a preliminary study with engineering student teams. The initial results show that the Activity Theory-based technique allows teams to gain deeper insights into their needs space.

Creative inventive design and research

NASA Technical Reports Server (NTRS)

Kerley, James J.

1994-01-01

This paper is a summary of a course given at the Goddard Space Flight Center for graduate engineers entitled 'Creative Inventive Design and Research.' This course strikes at the heart of the problem as it describes the thinking process itself before it goes deeper into the design process as a structured method for performing creative design. Many problem examples and figures are presented in a form that should make clear to all students what this process is and how it can be used.

Narratives Reflecting the Lived Experiences of People with Brain Disorders: Common Psychosocial Difficulties and Determinants

PubMed Central

Hartley, Sally; McArthur, Maggie; Coenen, Michaela; Cabello, Maria; Covelli, Venusia; Roszczynska-Michta, Joanna; Pitkänen, Tuuli; Bickenbach, Jerome; Cieza, Alarcos

2014-01-01

Background People with brain disorders - defined as both, mental disorders and neurological disorders experience a wide range of psychosocial difficulties (PSDs) (e.g., concentrating, maintaining energy levels, and maintaining relationships). Research evidence is required to show that these PSDs are common across brain disorders. Objectives To explore and gain deeper understanding of the experiences of people with seven brain disorders (alcohol dependency, depression, epilepsy, multiple sclerosis, Parkinson’s disease, schizophrenia, stroke). It examines the common PSDs and their influencing factors. Methods Seventy seven qualitative studies identified in a systematic literature review and qualitative data derived from six focus groups are used to generate first-person narratives representing seven brain disorders. A theory-driven thematic analysis of these narratives identifies the PSDs and their influencing factors for comparison between the seven disorders. Results First-person narratives illustrate realities for people with brain disorders facilitating a deeper understanding of their every-day life experiences. Thematic analysis serves to highlight the commonalities, both of PSDs, such as loneliness, anger, uncertainty about the future and problems with work activities, and their determinants, such as work opportunities, trusting relationships and access to self-help groups. Conclusions The strength of the methodology and the narratives is that they provide the opportunity for the reader to empathise with people with brain disorders and facilitate deeper levels of understanding of the complexity of the relationship of PSDs, determinants and facilitators. The latter reflect positive aspects of the lives of people with brain disorders. The result that many PSDs and their influencing factors are common to people with different brain disorders opens up the door to the possibility of using cross-cutting interventions involving different sectors. This strengthens the message that ‘a great deal can be done’ to improve the lived experience of persons with brain disorders when medical interventions are exhausted. PMID:24805128

Hybridization regulated metal penetration at transition metal-organic semiconductor contacts

NASA Astrophysics Data System (ADS)

Chuang, Tzu-Hung; Lu, Kun-Ta; Lu, Chun-I.; Hsu, Yao-Jane; Wei, Der-Hsin

2018-02-01

Metal-organic contacts are keys to define the functionalities of hybrid structures, but orbital hybridization at interfaces has made rationalizing their behavior a challenging task. Here, we examined Fe/C60 and Ni/C60 bilayers with X-ray absorption spectra to study the nature of orbital hybridization and the possible correlation with metal penetration. Depositing Fe or Ni on C60 films of sub-nanometer thickness to emulate interfaces, we found that both bilayers show evidence of not only d-π hybridization and metal penetration but also a deeper Ni penetration. The carbon K-edge spectra recorded from C60 films indicate that the deeper Ni penetration is accompanied by a larger donation of electrons from Ni to C60. This finding of hybridization-modulated metal penetration is somewhat counterintuitive but is consistent with a scenario of metal-C60 hybridization competing with metal-metal aggregation. A stronger Ni-C60 hybridization could result in smaller Ni clusters and a greater probability of penetration through the interstitial space between C60 molecules. We conclude that metal penetration can be regulated with orbital hybridization between metal and C60.

Multiphoton imaging microscopy at deeper layers with adaptive optics control of spherical aberration.

PubMed

Bueno, Juan M; Skorsetz, Martin; Palacios, Raquel; Gualda, Emilio J; Artal, Pablo

2014-01-01

Despite the inherent confocality and optical sectioning capabilities of multiphoton microscopy, three-dimensional (3-D) imaging of thick samples is limited by the specimen-induced aberrations. The combination of immersion objectives and sensorless adaptive optics (AO) techniques has been suggested to overcome this difficulty. However, a complex plane-by-plane correction of aberrations is required, and its performance depends on a set of image-based merit functions. We propose here an alternative approach to increase penetration depth in 3-D multiphoton microscopy imaging. It is based on the manipulation of the spherical aberration (SA) of the incident beam with an AO device while performing fast tomographic multiphoton imaging. When inducing SA, the image quality at best focus is reduced; however, better quality images are obtained from deeper planes within the sample. This is a compromise that enables registration of improved 3-D multiphoton images using nonimmersion objectives. Examples on ocular tissues and nonbiological samples providing different types of nonlinear signal are presented. The implementation of this technique in a future clinical instrument might provide a better visualization of corneal structures in living eyes.

Should We Care that Johnny Can't Catch and Susie Can't Skip? What Should We Do about It?

ERIC Educational Resources Information Center

Whitall, Jill; Clark, Jane E.

2011-01-01

Physical and sport educators care that Johnny and Susie cannot move as well as their peers. They try their best to improve their skill levels because they value participation and skillfulness in sport and physical activity. However, many times there is a deeper problem as to why Johnny or Susie cannot move as well as their peers. Physical and…

Manual resurfacing and trichloroacetic acid for the treatment of patients with widespread actinic damage. Clinical and histologic observations.

PubMed

Cooley, J E; Casey, D L; Kauffman, C L

1997-05-01

A facial resurfacing regimen combining manual abrasion of the skin and 25% trichloroacetic acid has been reported to produce excellent results, but the histologic depth of injury produced by this technique has not been studied. To describe our experience with this technique treating patients with extensive actinic damage and to determine the histologic depth of injury produced. We treated 40 patients using manual resurfacing and trichloroacetic acid, primarily for widespread actinic keratoses. Resurfacing tools included silicone carbide sandpaper, drywall screen, electrocautery tip cleaners, abrasive pads, scalpel blades, and curettes. Four patients underwent sequential biopsies to evaluate the depth of wounding using this technique. Manual resurfacing combined with trichloroacetic acid consistently produced excellent cosmetic results and nearly complete eradication of actinic keratoses. Histologically, treated areas showed replacement of the dermal elastotic band by newly formed collagen, a significantly deeper level of wounding than the Jessner's/35% trichloroacetic acid peel. There was no evidence for foreign body granulomas clinically or histologically as a result of the abrasive materials. The deeper level of this peel explains the improved cosmetic outcome and greater eradication of actinic keratoses. This treatment is particularly well suited for patients with extensive photodamage and widespread actinic keratoses.

A Improved and Highly Effective Seabed Surface Sand Sampling Device

NASA Astrophysics Data System (ADS)

Liu, Ying

2017-04-01

In marine geology research, it is necessary to obtain a sufficient quantity of seabed surface samples, while also ensuring that the samples are in their original state. Currently, there are a number of seabed surface sampling devices available, but it is very difficult to obtain sand samples using ordinary seabed surface sampling devices, whereas machine-controlled seabed surface sampling devices are unable to dive into deeper regions of water. To obtain larger quantities of samples in their original states, many researchers have tried to improve seabed surface sampling devices, but these efforts have generally produced ambiguous results. To resolve the aforementioned issue, we have designed an improved and highly effective seabed surface sand sampling device, which incorporates the strengths of a variety of sampling devices; it is capable of diving into deeper water regions to obtain sand samples, and is also suited for use in streams, rivers, lakes and seas with varying levels of flow velocities and depth.

[Effects of nitrogen application level on soil nitrate accumulation and ammonia volatilization in high-yielding wheat field].

PubMed

Wang, Dong; Yu, Zhenwen; Yu, Wenming; Shi, Yu; Zhou, Zhongxin

2006-09-01

The study showed that during the period from sowing to pre-wintering, the soil nitrate in high-yielding wheat field moved down to deeper layers, and accumulated in the layers below 140 cm. An application rate of 96-168 kg N x hm(-2) increased the nitrate content in 0-60 cm soil layer and the wheat grain yield and its protein content, and decreased the proportion of apparent N loss to applied N and the ammonia volatilization loss from basal nitrogen. Applying 240 kg N x hm(-2) promoted the downward movement of soil nitrate and its accumulation in deeper layers, increased the proportion of apparent N loss to applied N and the ammonia volatilization loss from basal nitrogen, had no significant effect on the protein content of wheat grain, but decreased the grain yield. The appropriate application rate of nitrogen on high-yielding wheat field was 132-204 kg N x hm(-2).

Correlation of the Jurassic through Oligocene Stratigraphic Units of Trinidad and Northeastern Venezuela

DOE Office of Scientific and Technical Information (OSTI.GOV)

Algar, S.; Erikson, J.P.

1995-04-01

The Jurassic through Oligocene stratigraphies of Trinidad and the Serrenia del Interior of eastern Venezuela exhibit many similarities because of their proximity on the passive continental margins of northeastern South America. A slightly later subsidence in eastern Venezuela, and the generally deeper-water sedimentation in Trinidad, is interpreted to be the result of a serration of the original rift margin, producing an eastern Venezuela promontory and Trinidadian re-entrant. We interpret these serrations to be the result of oblique (NW-SE) spreading of North and South America during Middle and late Jurassic time. The stratigraphies of northeastern Venezuela and Trinidad contrast in themore » Hauterivan-Albian interval, with dynamic shallow shelf environments prevailing in the Serrenia del Interior and deeper marine submarine-fan deposition in Trinidad. Both areas develop middle to Upper Cretaceous source rocks during a time of eustatic sea level high and widespread oceanic anoxia. 15 refs., 4 fig.« less

The role of depth in regulating water quality and fish assemblages in oxbow lakes

USGS Publications Warehouse

Goetz, Daniel B.; Miranda, Leandro E.; Kroger, Robert; Andrews, Caroline S.

2015-01-01

We evaluated water quality and fish assemblages in deep (> 3.0 m; N = 7) and shallow (< 1.5 m; N = 6) floodplain lakes in the intensively cultivated Yazoo River Basin (Mississippi, USA) using indirect gradient multivariate procedures. Shallow lakes displayed wide diel oxygen fluctuations, some reaching hypoxic/anoxic conditions for extended periods of time, high suspended solids, and extreme water temperatures. Conversely, deeper lakes were represented by higher visibility, stable oxygen levels, and cooler water temperatures. Fish assemblages in shallow lakes were dominated by tolerant, small-bodied fishes and those able to breathe atmospheric oxygen. Deeper lakes had a greater representation of predators and other large-bodied fishes. Our evaluation suggests fish assemblages are reflective of oxbow lakes water quality, which is shaped by depth. Understanding the interactions between depth, water quality, and fish assemblages may facilitate development of effective management plans for improving conditions necessary to sustain diverse fish assemblages in agriculturally dominated basins.

[Features of fractal dynamics EEG of alpha-rhythm in patients with neurotic and neurosis-like disorders].

PubMed

Shul'ts, E V; Baburin, I N; Karavaeva, T A; Karvasarskiĭ, B D; Slezin, V B

2011-01-01

Fifty-five patients with neurotic and neurosis-like disorders and 20 healthy controls, aged 17-64 years, have been examined. The basic research method was electroencephalography (EEG) with the fractal analysis of alpha power fluctuations. In patients, the changes in the fractal structure were of the same direction: the decrease of fractal indexes of low-frequency fluctuations and the increase of fractal indexes of mid-frequency fluctuations. Patients with neurosis-like disorders, in comparison to those with neurotic disorders, were characterized by more expressed (quantitative) changes in fractal structures of more extended character. It suggests the presence of deeper pathological changes in patients with neurosis-like disorders.