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Sample records for del pan artocarpus

  1. Novel stilbenes from Artocarpus nanchuanensis.

    PubMed

    Zhang, Pu-Zhao; Gu, Jian; Zhang, Guo-Lin

    2015-01-01

    Four new stilbene derivatives, hypargystilbenes B-E (1-4), together with seven known compounds (5-11), were isolated from the stems of Artocarpus nanchuanensis S.S. Chang. Their structures were elucidated on the basis of spectral data. Hypargystilbene B, hypargystilbene D, and hypargystilbene E exhibited protein tyrosine phosphatase 1B inhibitory effects with corresponding IC50 values of 3.23, 37.31, and 2.53 nM.

  2. Prenylated flavones from Artocarpus altilis.

    PubMed

    Shamaun, Shireen Shaharina; Rahmani, Mawardi; Hashim, Najihah Mohd; Ismail, Hazar Bebe Mohd; Sukari, Mohd Aspollah; Lian, Gwendoline Ee Cheng; Go, Rusea

    2010-10-01

    Six prenylated flavones, including one new compound, were isolated and identified from the stem bark extracts of Artocarpus altilis. The new prenylated flavone hydroxyartocarpin (1) was characterized as 3-(gamma,gamma-dimethylallyl)-6-isopentenyl-5,8,2',4'-tetrahydroxy-7-methoxyflavone and the known compounds were artocarpin (2), morusin (3), cycloartobiloxanthone (4), cycloartocarpin A (5) and artoindonesianin V (6). The structures of the compounds were determined by spectroscopic methods (IR, MS, (1)H-NMR and (13)C-NMR) and comparison with published data for the known compounds.

  3. Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in three other Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. Nineteen microsatellite primers were tes...

  4. Artocarpus: a review of its traditional uses, phytochemistry and pharmacology.

    PubMed

    Jagtap, U B; Bapat, V A

    2010-05-27

    The genus Artocarpus (Moraceae) comprises about 50 species of evergreen and deciduous trees. Economically, the genus is of appreciable importance as a source of edible fruit, yield fairly good timber and is widely used in folk medicines. The aim of the present review is to present comprehensive information of the chemical constituents, biological and pharmacological research on Artocarpus which will be presented and critically evaluated. The close connection between traditional and modern sources for ethnopharmacological uses of Artocarpus species, especially for treatment against inflammation, malarial fever, diarrhoea, diabetes and tapeworm infection. Artocarpus species are rich in phenolic compounds including flavonoids, stilbenoids, arylbenzofurons and Jacalin, a lectin. The extracts and metabolites of Artocarpus particularly those from leaves, bark, stem and fruit possess several useful bioactive compounds and recently additional data are available on exploitation of these compounds in the various biological activities including antibacterial, antitubercular, antiviral, antifungal, antiplatelet, antiarthritic, tyrosinase inhibitory and cytotoxicity. Several pharmacological studies of the natural products from Artocarpus have conclusively established their mode of action in treatment of various diseases and other health benefits. Jacalin, a lectin present in seeds of this plant has a wide range of activities. Strong interdisciplinary programmes that incorporate conventional and new technologies will be critical for the future development of Artocarpus as a promising source of medicinal products. In the present review, attempts on the important findings have been made on identification; synthesis and bioactivity of metabolites present in Artocarpus which have been highlighted along with the current trends in research on Artocarpus.

  5. Flavonoids from the roots of Artocarpus heterophyllus.

    PubMed

    Yuan, Wen-Jun; Yuan, Jin-Bin; Peng, Jia-Bing; Ding, Yuan-Qing; Zhu, Ji-Xiao; Ren, Gang

    2017-03-01

    Four new flavonoids, artoheteroids A-D (1-4), together with six known ones (5-10), were isolated from the roots of Artocarpus heterophyllus. Their structures were elucidated by spectroscopic methods, including 1D and 2D NMR, UV, IR, CD, and HR-ESI-MS. All isolated compounds were screened for their inhibitory abilities against cathepsin K (CatK). Among them, compounds 1-2, 4-6, and 10 were found to have suppression capabilities against CatK with IC50 values ranging from 1.4 to 93.9μM.

  6. Peter Pan.

    ERIC Educational Resources Information Center

    Storr, Catherine

    1992-01-01

    Offers a contemporary view of J. M. Barrie's life and his classic story, "Peter Pan." Suggests that "Peter Pan" does not really speak for today's children and that the time for Peter Pan's retirement has come. (PRA)

  7. Artocarpus plants as a potential source of skin whitening agents.

    PubMed

    Arung, Enos Tangke; Shimizu, Kuniyoshi; Kondo, Ryuichiro

    2011-09-01

    Artocarpus plants have been a focus of constant attention due to the potential for skin whitening agents. In the in vitro experiment, compounds from the Artocarpus plants, such as artocarpanone, norartocarpetin, artocarpesin, artogomezianol, andalasin, artocarbene, and chlorophorin showed tyrosinase inhibitory activity. Structure-activity investigations revealed that the 4-substituted resorcinol moiety in these compounds was responsible for their potent inhibitory activities on tyrosinase. In the in vitro assay, using B16 melanoma cells, the prenylated polyphenols isolated from Artocarpus plants, such as artocarpin, cudraflavone C, 6-prenylapigenin, kuwanon C, norartocarpin, albanin A, cudraflavone B, and brosimone I showed potent inhibitory activity on melanin formation. Structure-activity investigations revealed that the introduction of an isoprenoid moiety to a non-isoprenoid-substituted polyphenol enhanced the inhibitory activity of melanin production in B16 melanoma cells. In the in vivo investigation, the extract of the wood of Artocarpus incisus and a representative isolated compound from it, artocarpin had a lightening effect on the skin of guinea pigs' backs. Other in vivo experiments using human volunteers have shown that water extract of Artocarpus lakoocha reduced the melanin formation in the skin of volunteers. These results indicate that the extracts of Artocarpus plants are potential sources for skin whitening agents.

  8. A new prenylated aurone from Artocarpus altilis.

    PubMed

    Huong, Tran Thu; Cuong, Nguyen Xuan; Tram, Le Huyen; Quang, Tran Thuong; Duong, Le Van; Nam, Nguyen Hoai; Dat, Nguyen Tien; Huong, Phan Thi Thanh; Diep, Chau Ngoc; Kiem, Phan Van; Minh, Chau Van

    2012-01-01

    Phytochemical study of the methanol extract of Artocarpus altilis resulted in the isolation of a new prenylated aurone, artocarpaurone (1), together with eight known compounds including two prenylated chalcones (2 and 3), three prenylated flavanones (4-6), and three triterpenes (7-9). The structure of 1 was elucidated as 6-hydroxy-2-[8-hydroxy-2-methyl-2-(4-methyl-3-pentenyl)-2H-1-benzopyran-5-ylmethylene]-3(2H)-benzofuranone by spectroscopic methods including 1D and 2D NMR spectra and FT-ICR-MS. Compound 1 showed moderate nitric oxide radical scavenging activity, whereas 2 and 3 had moderate 2,2-diphenyl-1-picrylhydrazyl radical scavenging effect, compared with the positive control (+)-catechin.

  9. Flavonoids from Artocarpus anisophyllus and their bioactivities.

    PubMed

    Lathiff, Siti Mariam Abdul; Jemaon, Noraini; Abdullah, Siti Awanis; Jamil, Shajarahtunnur

    2015-03-01

    Two new prenylated flavonoids, 4',5-dihydroxy-6,7-(2,2-dimethylpyrano)-2'-methoxy-8-γ,γ-dimethylallylflavone 1 and 3'-hydroxycycloartocarpin 2 along with six known flavonoids, 5,7-dihydroxy-4'-methoxy-8-prenylflavanone 3, isobavachalcone 4, pyranocycloartobiloxanthone A 5, artocarpin 6, chaplashin 7 and cycloartocarpin 8 were isolated for the first time from the leaves and the heartwoods of Artocarpus anisophyllus Miq. The structures of isolated flavonoids were elucidated spectroscopically using 1D and 2D NMR, FTIR, MS, UV and also by comparison with literature data. These flavonoids were screened for their antioxidant and tyrosinase inhibitory activities. The dichloromethane and ethyl acetate crude extracts together with 3'-hydroxycycloartocarpin 2, pyranocycloartobiloxanthone A 5 and artocarpin 6 showed DPPH (2,2-diphenyl-l-picrylhydrazyl) radical scavenging activity with SC50 values of 80.2, 40.0, 152.9, 20.2 and 140.0 μg/mL in 30 min, respectively. Pyranocycloartobiloxanthone A 5 exhibited significant tyrosinase inhibitory activity against tyrosinase from mushroom with IC50 values of 60.5 μg/mL.

  10. Chloroplast microsatellite markers for Artocarpus (Moraceae) developed from transcriptome sequences

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Premise of the study: Chloroplast microsatellite loci were characterized from transcriptomes of Artocarpus (A.) altilis (breadfruit) and A. camansi (breadnut). They were tested in A. odoratissimus (terap) and A. altilis and evaluated in silico for two congeners. Methods and Results: 15 simple seque...

  11. New isoprenylated flavones and stilbene derivative from Artocarpus hypargyreus.

    PubMed

    Yu, Mei-Hua; Zhao, Ting; Yan, Gui-Rui; Yang, Hong-Xun; Wang, He-Yao; Hou, Ai-Jun

    2012-02-01

    Three new isoprenylated flavones, hypargyflavones A-C (1-3, resp.), and one novel stilbene derivative, hypargystilbene A (4), together with seven known compounds, 5-11, were isolated from the stems of Artocarpus hypargyreus Hance. The structures were elucidated by spectroscopic methods. Hypargyflavone A (1), cudraflavone C (8), brosimone I (10), and norartocarpin (11) showed inhibitory effects on pancreatic lipase.

  12. A new flavan-3-ol from Artocarpus nitidus subsp. lingnanensis.

    PubMed

    Ti, Hui-Hui; Lin, Li-Dong; Ding, Wen-Bing; Wei, Xiao-Yi

    2012-01-01

    Further investigation on the stems of Artocarpus nitidus subsp. lingnanensis led to the isolation and characterization of a new flavan-3-ol, named artoflavanocoumarin, along with three known compounds (+)-catechin, (+)-afzelechin 3-O-α-L-rhamnoside, and (+)-catechin 3-O-α-L-rhamnoside. Their structures were elucidated on the basis of spectroscopic data.

  13. Artomandin, a new xanthone from Artocarpus kemando (Moraceae).

    PubMed

    Ee, Gwendoline Cheng Lian; Teo, Siow Hwa; Rahmani, Mawardi; Lim, Chan Kiang; Lim, Yang Mooi; Go, Rusea

    2011-06-01

    A new furanodihydrobenzoxanthone, artomandin (1), together with three other flavonoid derivatives, artoindonesianin C, artonol B, and artochamin A, as well as β-sitosterol were isolated from the stem bark of Artocarpus kemando. The structures of these compounds were determined on the basis of spectral evidence. All of these compounds displayed inhibition effects to a very susceptible degree in cancer cell line tests. Compound 1 also exhibited significant antioxidant capacity in the free radical 1,1-diphenyl-2-picrylhydrazyl tests.

  14. New phenolic compounds from the twigs of Artocarpus heterophyllus.

    PubMed

    Di, X; Wang, S; Wang, B; Liu, Y; Yuan, H; Lou, H; Wang, X

    2013-02-01

    Two new chalcones, artocarpusins A and B (1 and 2), one new flavone, artocarpusin C (3), one new 2-arylbenzofuran derivative, artocarstilene A (4), and 15 flavonoids were isolated from the twigs of Artocarpus heterophyllus. Their structures were established on the basis of extensive spectroscopic analysis. Compounds 9 and 16 showed moderate inhibitory activity on the proliferation of the PC-3 and H460 cell lines.

  15. Physicochemical properties of Venezuelan breadfruit (Artocarpus altilis) starch.

    PubMed

    Rincón, Alicia Mariela; Padilla, Fanny C

    2004-12-01

    Artocarpus altilis, seedless variety, is a fruit-producing plant which is cultived in Margarita Island, Venezuela, and is consumed by the inhabitants of the region. Its chemical composition and physical characteristics were determined. The chemical (AOAC and AACC methods), physicochemical, morphometric characteristics, viscoamylographic properties and digestibility in vitro of starch from Artocarpus were studied. The starch yield was 18.5 g/100 g (dw)w with a purity of 98.86%, 27.68 and 72.32% of amylose and amylopectin, respectively. Scanning electron microscopy showed irregular-rounded granules. Swelling power, water absorption and solubility values were determined and found to be higher than that of corn and amaranth starch. The amylographic study showed a gelatinization temperature at 73.3 degrees C, with high stability during heating and cooling cycles. Artocarpus starch could also be categorized in the group of mixed short chain branched/long chain branched glucan starches, this agrees with digestibility results that showed a high degree of digestibility in vitro. These results might be advantageous in medical and food use.

  16. Development of microsatellite loci in Artocarpus altilis (Moraceae) and cross-amplification in congeneric species1

    PubMed Central

    Witherup, Colby; Ragone, Diane; Wiesner-Hanks, Tyr; Irish, Brian; Scheffler, Brian; Simpson, Sheron; Zee, Francis; Zuberi, M. Iqbal; Zerega, Nyree J. C.

    2013-01-01

    • Premise of the study: Microsatellite loci were isolated and characterized from enriched genomic libraries of Artocarpus altilis (breadfruit) and tested in four Artocarpus species and one hybrid. The microsatellite markers provide new tools for further studies in Artocarpus. • Methods and Results: A total of 25 microsatellite loci were evaluated across four Artocarpus species and one hybrid. Twenty-one microsatellite loci were evaluated on A. altilis (241), A. camansi (34), A. mariannensis (15), and A. altilis × mariannensis (64) samples. Nine of those loci plus four additional loci were evaluated on A. heterophyllus (jackfruit, 426) samples. All loci are polymorphic for at least one species. The average number of alleles ranges from two to nine within taxa. • Conclusions: These microsatellite primers will facilitate further studies on the genetic structure and evolutionary and domestication history of Artocarpus species. They will aid in cultivar identification and establishing germplasm conservation strategies for breadfruit and jackfruit. PMID:25202565

  17. Prenylated Dihydrochalcones from Artocarpus altilis as Antiausterity Agents.

    PubMed

    Nguyen, Mai Thanh Thi; Nguyen, Nhan Trung; Awale, Suresh

    2015-01-01

    Human pancreatic cancer cell lines have remarkable tolerance to nutrition starvation, which enables them to survive under a tumor microenvironment. A novel antiausterity strategy in anticancer drug discovery led to the discovery of agents that preferentially inhibit the survival of cancer cells under low nutrient conditions. Artocarpus altilis (Family: Moraceae) is commonly referred to as breadfruit, traditionally for the treatment of many diseases. Many prenylated flavonoid and prenylated chalocones together with their cancer cell cytotoxicity were reported from this plant. This chapter briefly summarizes the constituents, biosynthesis, cytotoxicity, and antiausterity activity on PANC-1 human pancreatic cancer cell line of A. altilis.

  18. Flavonoids and triterpenes from the leaves of Artocarpus fulvicortex.

    PubMed

    Jamil, Shajarahtunnur; Taherb, Muhammad; Sirat, Hasnah M; Othman, Nur Azlin

    2012-12-01

    Five flavonoids, 5-hydroxy-(6:7,3':4')-di(2,2-dimethylpyrano)flavone 1, carpachromene 2, cycloartocarpesin 3, norartocarpetin 4 and 2'-hydroxy-4,4',6'-trimethoxychalcone 5, along with three triterpenes, friedelin 6, lupeol 7 and 13-sitosterol 8 were isolated for the first time from the leaves of Artocarpus fulvicortex F.M. Jarrett. The structures of these compounds were established by analysis of their spectroscopic (1D and 2D NMR) and spectrometric (MS) data, as well as by comparison of these with those reported in the literature.

  19. Stilbenes and flavonoids from Artocarpus nitidus subsp. lingnanensis.

    PubMed

    Ti, Huihui; Wu, Ping; Lin, Lidong; Wei, Xiaoyi

    2011-06-01

    The first stilbene possessing a γ-aminobutyric acid lactam function, artocarpene (1), and a new flavanone, 2-hydroxynaringenin 4'-O-β-d-glucopyranoside (2), were isolated from the stems of Artocarpus nitidus subsp. lingnanensis along with four known compounds, 2-hydroxynaringenin (3), oxyresveratrol (4), 3,4',5-trihydroxy-3'-prenylstilbene (5) and norartocarpetin (6). Their structures were elucidated on the basis of spectroscopic data. Compounds 1 exhibited weak antioxidant activity and 2 displayed weak cytotoxicity against human lung cancer A549 cell line.

  20. Tyrosinase inhibitors from the wood of Artocarpus heterophyllus.

    PubMed

    Nguyen, Nhan Trung; Nguyen, Mai Ha Khoa; Nguyen, Hai Xuan; Bui, Ngan Kim Nguyen; Nguyen, Mai Thanh Thi

    2012-11-26

    From the methanolic-soluble extract of the wood of Artocarpus heterophyllus, four new flavones, artocarmins A-D (1-4), and three new chalcones, artocarmitins A-C (5-7), have been isolated together with 13 known compounds. Their structures were determined on the basis of the spectroscopic data. Compounds 1-4, 6, 7, 9-16, and 20 displayed significant tyrosinase inhibitory activity. The most active compound, morachalcone A (12) (IC50, 0.013 μM), was 3000 times more active as a tyrosinase inhibitor than a positive control, kojic acid (IC50, 44.6 μM).

  1. Antiproliferative activity of xanthones isolated from Artocarpus obtusus.

    PubMed

    Hashim, Najihah Mohd; Rahmani, Mawardi; Ee, Gwendoline Cheng Lian; Sukari, Mohd Aspollah; Yahayu, Maizatulakmal; Oktima, Winda; Ali, Abd Manaf; Go, Rusea

    2012-01-01

    An investigation of the chemical constituents in Artocarpus obtusus species led to the isolation of three new xanthones, pyranocycloartobiloxanthone A (1), dihydroartoindonesianin C (2), and pyranocycloartobiloxanthone B (3). The compounds were subjected to antiproliferative assay against human promyelocytic leukemia (HL60), human chronic myeloid leukemia (K562), and human estrogen receptor (ER+) positive breast cancer (MCF7) cell lines. Pyranocycloartobiloxanthone A (1) consistently showed strong cytotoxic activity against the three cell lines compared to the other two with IC(50) values of 0.5, 2.0 and 5.0 μg/mL, respectively. Compound (1) was also observed to exert antiproliferative activity and apoptotic promoter towards HL60 and MCF7 cell lines at respective IC(50) values. The compound (1) was not toxic towards normal cell lines human nontumorigenic breast cell line (MCF10A) and human peripheral blood mononuclear cells (PBMCs) with IC(50) values of more than 30 μg/mL.

  2. Hedgehog inhibitors from Artocarpus communis and Hyptis suaveolens.

    PubMed

    Arai, Midori A; Uchida, Kyoko; Sadhu, Samir K; Ahmed, Firoj; Koyano, Takashi; Kowithayakorn, Thaworn; Ishibashi, Masami

    2015-08-01

    The hedgehog (Hh) signaling pathway plays crucial roles in cell maintenance and proliferation during embryonic development. Naturally occurring Hh inhibitors were isolated from Artocarpus communis and Hyptis suaveolens using our previously constructed cell-based assay system. Bioactivity guided fractionation led to the isolation of 15 compounds, including seven new compounds (4, 5, 6, 7, and 9-11). The isolated compounds showed cytotoxicity against a cancer cell line (PANC1) in which Hh signaling was abnormally activated. Several compounds (12-14; GLI1 transcriptional inhibition IC50=7.6, 4.7, and 4.0 μM, respectively) inhibited Hh related protein (BCL2) expression. Moreover, compounds 1, 12, and 13 disrupted GLI1 and DNA complex formation.

  3. Geranyl dihydrochalcones from Artocarpus altilis and their antiausteric activity.

    PubMed

    Nguyen, Mai Thanh Thi; Nguyen, Nhan Trung; Nguyen, Khang Duy Huu; Dau, Hien Thu Thi; Nguyen, Hai Xuan; Dang, Phu Hoang; Le, Tam Minh; Nguyen Phan, Trong Huu; Tran, Anh Hai; Nguyen, Bac Duy; Ueda, Jun-Ya; Awale, Suresh

    2014-02-01

    Human pancreatic cancer cell lines have remarkable tolerance to nutrition starvation, which enables them to survive under a tumor microenvironment. The search for agents that preferentially inhibit the survival of cancer cells under low nutrient conditions is a novel antiausterity strategy in anticancer drug discovery. In this study, the methanolic extract of the leaves of Artocarpus altilis showed 100 % preferential cytotoxicity against PANC-1 human pancreatic cancer cells under nutrient-deprived conditions at a concentration of 50 µg/mL. Further investigation of this extract led to the isolation of eight new geranylated dihydrochalcones named sakenins A-H (1-8) together with four known compounds (9-12). Among them, sakenins F (6) and H (8) were identified as potent preferentially cytotoxic candidates with PC50 values of 8.0 µM and 11.1 µM, respectively.

  4. Flavonoid and stilbenoid production in callus cultures of Artocarpus lakoocha.

    PubMed

    Maneechai, Suthira; De-Eknamkul, Wanchai; Umehara, Kaoru; Noguchi, Hiroshi; Likhitwitayawuid, Kittisak

    2012-09-01

    Callus cultures of Artocarpus lakoocha Roxb., established from seedling explants and maintained on woody plant medium containing 1mg/l 2,4-dichlorophenoxyacetic acid and 1mg/l benzyladenine, were studied for their chemical constituents and biosynthetic potential of secondary metabolites. Four prenylflavones and prenylated stilbenes, along with nine known polyphenolic compounds, were isolated and elucidated for their structures through extensive analysis of their NMR and MS data. Among the 13 isolates, it appeared that seven of them are prenylated derivatives of 5,7,2',4'-tetrahydroxyflavones, and four are prenylated derivatives of 2,4,3',5'-tetrahydroxystilbene (oxyresveratrol), suggesting that the biosynthetic pathways of these two polyphenolic groups and their prenylating enzymes are highly expressed in A. lakoocha callus cultures. A study on the growth-product relationship of the callus cultures showed that the secondary metabolites were all formed simultaneously during the rapid growth phase of the culture cycle, with various prenylflavones, and a prenylated stilbene as major constituents. In assays for DPPH free radical scavenging activity and tyrosinase inhibitory potential, the stilbenoids appeared to possess moderate effects, whereas the flavonoids showed only weak activity.

  5. Diversity of the breadfruit complex (Artocarpus, Moraceae): Genetic characterization of critical germplasm

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Breadfruit (Artocarpus altilis, Moraceae) is a traditional staple starch crop in Oceania and has been introduced throughout the tropics. This study uses microsatellite markers to characterize the genetic diversity of breadfruit and its wild relatives housed in the USDA National Plant Germplasm Syste...

  6. Characterization of antiproliferative activity constituents from Artocarpus heterophyllus.

    PubMed

    Zheng, Zong-Ping; Xu, Yang; Qin, Chuan; Zhang, Shuang; Gu, Xiaohong; Lin, Yingying; Xie, Guobin; Wang, Mingfu; Chen, Jie

    2014-06-18

    Artocarpus heterophyllus is an evergreen fruit tree cultivated in many tropical regions. Previous studies have shown that some of its compositions exhibited potential tyrosinase inhibition activities. This study indentified 8 new phenolic compounds, artoheterophyllins E-J (1-6), 4-geranyl-2',3,4',5-tetrahydroxy-cis-stilbene (7), and 5-methoxymorican M (8) and 2 new natural compounds (9 and 10), 2,3-dihydro-5,7-dihydroxy-2-(2-hydroxy-4-methoxyphenyl)-4H-benzopyran-4-one and 6-[(1S,2S)-1,2-dihydroxy-3-methylbutyl]-2-(2,4-dihydroxyphenyl)-5-hydroxy-7-methoxy-3-(3-methyl-2-buten-1-yl)-4H-1-benzopyran-4-one, together with 23 known compounds (11-33), from the ethanol extract of the wood of A. heterophyllus. The structures of the eight new compounds (1-8) and two new natural compounds were established by extensive 1D- and 2D-NMR experiments. The anticancer effects of the isolated compounds were examined in MCF-7, H460, and SMMC-7721 human cancer cell lines by MTT assay. Compounds 5, 11, 12, and 30 significantly reduced the cell viabilities of these cell lines. Especially, compounds 11 and 30 resulted in more potent cytotoxicity than the positive control, 5-fluorouracil (5-Fu), in SMMC-7721 cell line, with IC50 values of 15.85 and 12.06 μM, whereas compound 30 exhibited more potent cytotoxicity than 5-Fu in NCI-H460 cell line, with an IC50 value of 5.19 μM. In addition, this study suggests that compounds 11 and 30 from the wood of A. heterophyllus have anticancer potential via MAPK pathways.

  7. Antioxidant, antimicrobial and tyrosinase inhibitory activities of xanthones isolated from Artocarpus obtusus F.M. Jarrett.

    PubMed

    Hashim, Najihah Mohd; Rahmani, Mawardi; Ee, Gwendoline Cheng Lian; Sukari, Mohd Aspollah; Yahayu, Maizatulakmal; Amin, Muhamad Aizat Mohd; Ali, Abd Manaf; Go, Rusea

    2012-05-21

    One of the most promising plants in biological screening test results of thirteen Artocarpus species was Artocarpus obtusus FM Jarrett and detailed phytochemical investigation of powdered dried bark of the plant has led to the isolation and identification of three xanthones; pyranocycloartobiloxanthone A (1), dihydroartoindonesianin C (2) and pyranocycloartobiloxanthone B (3). These compounds were screened for antioxidant, antimicrobial and tyrosinase inhibitory activities. Pyranocycloartobiloxanthone A (1) exhibited a strong free radical scavenger towards DPPH free radicals with IC50 value of 2 µg/mL with prominent discoloration observed in comparison with standard ascorbic acid, α-tocopherol and quercetin, The compound also exhibited antibacterial activity against methicillin resistant Staphylococcus aureus (ATCC3359) and Bacillus subtilis (clinically isolated) with inhibition zone of 20 and 12 mm, respectively. However the other two xanthones were found to be inactive. For the tyrosinase inhibitory activity, again compound (1) displayed strong activity comparable with the standard kojic acid.

  8. Loving Peter Pan.

    ERIC Educational Resources Information Center

    Kinkaid, James R.

    2003-01-01

    Explores the story of "Peter Pan." Considers its creation, its role on the stage, and its impact on society. Considers how "Peter Pan" is about the inability to have make-believe and the true stick together: it dramatizes an artistic failure, the failure to make the vision of the play successful. (SG)

  9. Pan American Health Organization

    MedlinePlus

    ... contest on best experiences in health promotion in cities, schools and universities in the Americas The Pan ... will recognize outstanding health promotion practices developed by cities, schools, universities and institutions of higher education in ...

  10. The pipes of pan.

    PubMed

    Chalif, David J

    2004-12-01

    The pipes of pan is the crowning achievement of Pablo Picasso's neoclassical period of the 1920s. This monumental canvas depicts a mythological Mediterranean scene in which two sculpted classical giants stare out, seemingly across the centuries, toward a distant and lost Arcadia. Picasso was influenced by Greco-Roman art during his travels in Italy, and his neoclassical works typically portray massive, immobile, and pensive figures. Pan and his pipes are taken directly from Greek mythological lore by Picasso and placed directly into 20th century art. He frequently turned to various mythological figures throughout his metamorphosing periods. The Pipes of Pan was also influenced by the painter's infatuation with the beautiful American expatriate Sara Murphy, and the finished masterpiece represents a revision of a previously conceived neoclassical work. The Pipes of Pan now hangs in the Musee Picasso in Paris.

  11. Flavonoids with anti-HSV activity from the root bark of Artocarpus lakoocha.

    PubMed

    Sritularak, Boonchoo; Tantrakarnsakul, Kullasap; Lipipun, Vimolmas; Likhitwitayawuid, Kittisak

    2013-08-01

    From the MeOH extract of the root bark of Artocarpus lakoocha, a new compound 5,7,2',4'-tetrahydroxy-6-geranyl-3-prenyl-flavone (1) was isolated, along with three known flavonoids (+)-afzelechin-3-O-alpha-L-rhamnopyranoside (2), (+)-catechin (3) and cudraflavone C (4). Evaluation of these isolates for inhibitory effects against Herpes simplex virus (HSV) types 1 and 2 was carried out using the inactivation method. Compounds 1 and 4 showed moderate and weak activity against both types of HSV, respectively, whereas 2 and 3 were devoid of activity.

  12. Evaluation of antioxidant capacity and phenol content in jackfruit (Artocarpus heterophyllus Lam.) fruit pulp.

    PubMed

    Jagtap, Umesh B; Panaskar, Shrimant N; Bapat, V A

    2010-06-01

    The antioxidant capacity of jackfruit (Artocarpus heterophyllus Lam. Fam. Moracae) fruit pulp (JFP) obtained from Western Ghats India was determined by evaluating the scavenging activity using 1,1-diphenyl-2-picrylhydrazyl (DPPH), ferric reducing power assays and N, N-dimethyl-p-phenylendiamine (DMPD) radical cation decolorization assay. JFP was analyzed for total phenolic content (TPC) and total flavonoids content (TFC). The ethanol and water are the best solvents for the extracting phenols and flavonoids from the JFP. The antioxidant activities of JFP extracts were correlated with the total phenolic and flavonoids content. The results indicated that the jackfruit pulp is one natural source of antioxidant compounds.

  13. Low-coverage, whole-genome sequencing of Artocarpus camansi (Moraceae) for phylogenetic marker development and gene discovery1

    PubMed Central

    Gardner, Elliot M.; Johnson, Matthew G.; Ragone, Diane; Wickett, Norman J.; Zerega, Nyree J. C.

    2016-01-01

    Premise of the study: We used moderately low-coverage (17×) whole-genome sequencing of Artocarpus camansi (Moraceae) to develop genomic resources for Artocarpus and Moraceae. Methods and Results: A de novo assembly of Illumina short reads (251,378,536 pairs, 2 × 100 bp) accounted for 93% of the predicted genome size. Predicted coding regions were used in a three-way orthology search with published genomes of Morus notabilis and Cannabis sativa. Phylogenetic markers for Moraceae were developed from 333 inferred single-copy exons. Ninety-eight putative MADS-box genes were identified. Analysis of all predicted coding regions resulted in preliminary annotation of 49,089 genes. An analysis of synonymous substitutions for pairs of orthologs (Ks analysis) in M. notabilis and A. camansi strongly suggested a lineage-specific whole-genome duplication in Artocarpus. Conclusions: This study substantially increases the genomic resources available for Artocarpus and Moraceae and demonstrates the value of low-coverage de novo assemblies for nonmodel organisms with moderately large genomes. PMID:27437173

  14. Isolation and identification of mosquito (Aedes aegypti) biting deterrent fatty acids from male inflorescences of breadfruit (Artocarpus altilis (Parkinson)Fosberg)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Dried male inflorescences of breadfruit (Artocarpus altilis, Moraceae) are burned in communities throughout Oceania to repel flying insects, including mosquitoes. This study was conducted to identify chemicals responsible for mosquito deterrence. Various crude extracts were evaluated, and the most a...

  15. The Pan Zhichang Incident

    ERIC Educational Resources Information Center

    Yuchen, Zhu

    2007-01-01

    This article examines why Pan Zhichang, a well-known professor and Ph.D. candidate supervisor at Nanjing University, has repeatedly been accused of plagiarism. It may not be difficult to check whether he has committed plagiarism, but seeking the deeper social and systemic reasons for a person's repeated "negligence" is indeed a…

  16. Timing of deformation in the Sarandí del Yí Shear Zone, Uruguay: Implications for the amalgamation of western Gondwana during the Neoproterozoic Brasiliano-Pan-African Orogeny

    NASA Astrophysics Data System (ADS)

    Oriolo, Sebastián.; Oyhantçabal, Pedro; Wemmer, Klaus; Basei, Miguel A. S.; Benowitz, Jeffrey; Pfänder, Jörg; Hannich, Felix; Siegesmund, Siegfried

    2016-03-01

    U-Pb and Hf zircon (sensitive high-resolution ion microprobe -SHRIMP- and laser ablation-inductively coupled plasma-mass spectrometry -LA-ICP-MS-), Ar/Ar hornblende and muscovite, and Rb-Sr whole rock-muscovite isochron data from the mylonites of the Sarandí del Yí Shear Zone, Uruguay, were obtained in order to assess the tectonothermal evolution of this crustal-scale structure. Integration of these results with available kinematic, structural, and microstructural data of the shear zone as well as with geochronological data from the adjacent blocks allowed to constrain the onset of deformation along the shear zone at 630-625 Ma during the collision of the Nico Pérez Terrane and the Río de la Plata Craton. The shear zone underwent dextral shearing up to 596 Ma under upper to middle amphibolite facies conditions, which was succeeded by sinistral shearing under lower amphibolite to upper greenschist facies conditions until at least 584 Ma. After emplacement of the Cerro Caperuza granite at 570 Ma, the shear zone underwent only cataclastic deformation between the late Ediacaran and the Cambrian. The Sarandí del Yí Shear Zone is thus related to the syncollisional to postcollisional evolution of the amalgamation of the Río de la Plata Craton and the Nico Pérez Terrane. Furthermore, the obtained data reveal that strain partitioning and localization with time, magmatism emplacement, and fluid circulation are key processes affecting the isotopic systems in mylonitic belts, revealing the complexity in assessing the age of deformation of long-lived shear zones.

  17. PanGeT: Pan-genomics tool.

    PubMed

    Yuvaraj, Iyyappan; Sridhar, Jayavel; Michael, Daliah; Sekar, Kanagaraj

    2017-02-05

    A decade after the concept of Pan-genome was first introduced; research in this field has spread its tentacles to areas such as pathogenesis of diseases, bacterial evolutionary studies and drug resistance. Gene content-based differentiation of virulent and a virulent strains of bacteria and identification of pathogen specific genes is imperative to understand their physiology and gain insights into the mechanism of genome evolution. Subsequently, this will aid in identifying diagnostic targets and in developing and selecting vaccines. The root of pan-genomic studies, however, is to identify the core genes, dispensable genes and strain specific genes across the genomes belonging to a clade. To this end, we have developed a tool, "PanGeT - Pan-genomics Tool" to compute the 'pan-genome' based on comparisons at the genome as well as the proteome levels. This automated tool is implemented using LaTeX libraries for effective visualization of overall pan-genome through graphical plots. Links to retrieve sequence information and functional annotations have also been provided. PanGeT can be downloaded from http://pranag.physics.iisc.ernet.in/PanGeT/ or https://github.com/PanGeTv1/PanGeT.

  18. "A Constant Transit of Finding": Fantasy as Realisation in "Pan's Labyrinth"

    ERIC Educational Resources Information Center

    Clark, Roger; McDonald, Keith

    2010-01-01

    This article considers Guillermo Del Toro's "Pan's Labyrinth" as a text which utilises key codes and conventions of children's literature as a means of encountering the trauma of Fascism. The article begins by placing "Pan's Labyrinth" at a contextual crossroads involving fairy tale and a Spanish cinematic tradition and…

  19. Chemical constituents derived from Artocarpus xanthocarpus as inhibitors of melanin biosynthesis.

    PubMed

    Jin, Yu-Jing; Lin, Cha-Chi; Lu, Tzy-Ming; Li, Jih-Heng; Chen, Ih-Sheng; Kuo, Yueh-Hsiung; Ko, Horng-Huey

    2015-09-01

    Twenty-four compounds, including the previously unknown artoxanthocarpuone A, artoxanthocarpuone B, hydroxylakoochin A, methoxylakoochin A, epoxylakoochin A, and artoxanthol, were isolated and characterized spectroscopically. Among them, artoxanthol is stilbene oligomer presumably constructed in a 5,11,12-triphenyl hexahydrochrysene scaffold by a Diels-Alder type of reaction, for which a biosynthetic pathway is proposed. Artoxanthol, alboctalol, steppogenin, norartocarpetin, resveratrol, oxyresveratrol, and chlorophorin potently inhibited mushroom tyrosinase activity with IC50 values from 0.9 to 5.7 μM that were all far stronger than the positive controls. Artoxanthocarpuone A, artoxanthocarpuone B, methoxylakoochin A, lakoochin A, cudraflavone C, artonin A, resveratrol, and chlorophorin reduced tyrosinase activity and inhibited α-melanocyte-stimulating hormone-induced melanin production in B16F10 melanoma cells without affecting cell proliferation. Collectively, the results suggest that the constituents of Artocarpus xanthocarpus have potential to be used as depigmentation agents.

  20. Screening antimutagenic and antiproliferative properties of extracts isolated from Jackfruit pulp (Artocarpus heterophyllus Lam).

    PubMed

    Ruiz-Montañez, G; Burgos-Hernández, A; Calderón-Santoyo, M; López-Saiz, C M; Velázquez-Contreras, C A; Navarro-Ocaña, A; Ragazzo-Sánchez, J A

    2015-05-15

    The present focused on the study of the antimutagenic and antiproliferative potential of pulp Jackfruit (Artocarpus heterophyllus Lam) extract, using Salmonella typhimurium tester strains TA98 and TA100 with metabolic activation (S9) and a cancer cell line M12.C3.F6 (murine B-cell lymphoma), respectively. Jackfruit pulp extract was sequentially fractionated by chromatography (RP-HPLC) and each fraction was tested for antimutagenic and antiproliferative activities. The organic extracts obtained from Jackfruit pulp reduced the number of revertants caused by aflatoxin B1 (AFB1) and proliferation of cells M12.C3.F6; a dose-response relationship was showed. Sequential RP-HPLC fractionation of the active extracts produced both antimutagenic and/or antiproliferative fractions. These results suggested that the Jackfruit contained compounds with chemoprotective properties to reduce the mutagenicity of AFB1, also proliferation of a cancer cell line.

  1. Development and characterization of EST-SSR markers for Artocarpus hypargyreus (Moraceae)1

    PubMed Central

    Liu, Haijun; Tan, Weizheng; Sun, Hongbin; Liu, Yu; Meng, Kaikai; Liao, Wenbo

    2016-01-01

    Premise of the study: Polymorphic microsatellite markers were developed for Artocarpus hypargyreus (Moraceae), a threatened species endemic to China, to investigate the genetic diversity and structure of the species. Methods and Results: Based on the transcriptome data of A. hypargyreus, 63 primer pairs were preliminarily designed and tested, of which 34 were successfully amplified and 10 displayed clear polymorphisms across the 67 individuals from four populations of A. hypargyreus. The results showed the number of alleles per locus ranged from three to 10, and the observed heterozygosity and expected heterozygosity per locus varied from 0.000 to 0.706 and from 0.328 to 0.807, respectively. Conclusions: These microsatellite markers will be useful in exploring genetic diversity and structure of A. hypargyreus. Furthermore, most loci were successfully cross-amplified in A. nitidus and A. heterophyllus, indicating that they will be of great value for genetic study across this genus. PMID:28101438

  2. [Effect of acetylation and oxidation on some properties of breadfruit (Artocarpus altilis) seed starch].

    PubMed

    Rincón, Alicia Mariela; Bou Rached, Lizet; Aragoza, Luis E; Padilla, Fanny

    2007-09-01

    Starch extracted from seeds of Artocarpus altilis (Breadfruit) was chemically modified by acetylation and oxidation, and its functional properties were evaluated and compared with these of native starch. Analysis of the chemical composition showed that moisture content was higher for modified starches. Ash, protein, crude fiber and amylose contents were reduced by the modifications, but did not alter the native starch granules' irregularity, oval shape and smooth surface. Acetylation produced changes in water absorption, swelling power and soluble solids, these values were higher for acetylated starch, while values for native and oxidized starches were similar. Both modifications reduced pasting temperature; oxidation reduced maximum peak viscosity but it was increased by acetylation. Hot paste viscosity was reduced by both modifications, whereas cold paste viscosity was lower in the oxidized starch and higher in the acetylated starch. Breakdown was increased by acetylation and reduced with oxidation. Setback value was reduced after acetylation, indicating it could minimize retrogradation of the starch.

  3. Isolation, transformation, anticancer, and apoptosis activity of lupeyl acetate from Artocarpus integra

    NASA Astrophysics Data System (ADS)

    Suwito, Hery; Heffen, Wan Lelly; Cahyana, Herry; Suwarso, Wahyudi Priyono

    2016-03-01

    Lupeyl acetate -a major constituent of the bark of Artocarpus integra- was isolated and then transformed chemically into lupeol and lupenone by hydrolysis and oxidation reaction respectively. The molecular structures of the prepared compounds were determined based on FTIR, MS and NMR spectrum evidences. Their anticancer activities were determined against breast cancer cells MCF-7 using neutral red assay, while their apoptotic activity were confirmed by flowcytometric analysis using Annexin V-FTIC assay and DNA fragmentation. The IC50 of Lupeyl acetate, lupeol, and lupenone were 48.79; 43.09; and 8.07 µg/mL respectively. The results of flowcytometric analysis and DNA fragmentation showed that anticancer activity of the prepared compounds following apoptosis mechanism.

  4. Ultrasound assisted extraction of pectin from waste Artocarpus heterophyllus fruit peel.

    PubMed

    Moorthy, I Ganesh; Maran, J Prakash; Ilakya, S; Anitha, S L; Sabarima, S Pooja; Priya, B

    2017-01-01

    Four factors three level face centered central composite response surface design was employed in this study to investigate and optimize the effect of process variables (liquid-solid (LS) ratio (10:1-20:1ml/g), pH (1-2), sonication time (15-30min) and extraction temperature (50-70°C)) on the maximum extraction yield of pectin from waste Artocarpus heterophyllus (Jackfruit) peel by ultrasound assisted extraction method. Numerical optimization method was adapted in this study and the following optimal condition was obtained as follows: Liquid-solid ratio of 15:1ml/g, pH of 1.6, sonication time of 24min and temperature of 60°C. The optimal condition was validated through experiments and the observed value was interrelated with predicted value.

  5. PanSNPdb: the Pan-Asian SNP genotyping database.

    PubMed

    Ngamphiw, Chumpol; Assawamakin, Anunchai; Xu, Shuhua; Shaw, Philip J; Yang, Jin Ok; Ghang, Ho; Bhak, Jong; Liu, Edison; Tongsima, Sissades

    2011-01-01

    The HUGO Pan-Asian SNP consortium conducted the largest survey to date of human genetic diversity among Asians by sampling 1,719 unrelated individuals among 71 populations from China, India, Indonesia, Japan, Malaysia, the Philippines, Singapore, South Korea, Taiwan, and Thailand. We have constructed a database (PanSNPdb), which contains these data and various new analyses of them. PanSNPdb is a research resource in the analysis of the population structure of Asian peoples, including linkage disequilibrium patterns, haplotype distributions, and copy number variations. Furthermore, PanSNPdb provides an interactive comparison with other SNP and CNV databases, including HapMap3, JSNP, dbSNP and DGV and thus provides a comprehensive resource of human genetic diversity. The information is accessible via a widely accepted graphical interface used in many genetic variation databases. Unrestricted access to PanSNPdb and any associated files is available at: http://www4a.biotec.or.th/PASNP.

  6. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 49 Transportation 4 2011-10-01 2011-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  7. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 49 Transportation 4 2014-10-01 2014-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  8. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 4 2013-10-01 2013-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  9. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 49 Transportation 4 2010-10-01 2010-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  10. 49 CFR 230.69 - Ash pans.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 49 Transportation 4 2012-10-01 2012-10-01 false Ash pans. 230.69 Section 230.69 Transportation... TRANSPORTATION STEAM LOCOMOTIVE INSPECTION AND MAINTENANCE STANDARDS Steam Locomotives and Tenders Ash Pans § 230.69 Ash pans. Ash pans shall be securely supported from mud-rings or frames with no part less than...

  11. Antiplasmodial, antitrypanosomal, and cytotoxic activities of prenylated flavonoids isolated from the stem bark of Artocarpus styracifolius.

    PubMed

    Bourjot, Mélanie; Apel, Cécile; Martin, Marie-Thérèse; Grellier, Philippe; Nguyen, Van Hung; Guéritte, Françoise; Litaudon, Marc

    2010-10-01

    In continuation of our efforts to find new antimalarial drugs, a systematic IN VITRO evaluation using a chloroquine resistant strain of PLASMODIUM FALCIPARUM (FcB1) was undertaken on extracts prepared from various parts of Vietnamese plants. The ethyl acetate extract obtained from the stem bark of ARTOCARPUS STYRACIFOLIUS (Moraceae) exhibited strong antiplasmodial activity (87 % at 10 µg/mL) whereas weak cytotoxicity was observed in a human fibroblast cell line (MRC-5). Phytochemical investigation of this extract led to isolation of two new prenylated flavonoids, styracifolins A and B ( 1 and 2), as well as the known artoheterophyllin A ( 3) and B ( 4), artonins A ( 5), B ( 6), and F ( 7), and heterophyllin ( 8). Structures of 1 and 2 were elucidated by spectroscopic methods and through comparison with data reported in the literature. Compounds 1- 8 exhibited antiplasmodial activities with IC (50) values ranging from 1.1 µM to 13.7 µM, and compounds 1, 2, 6, and 8 showed significant antitrypanosomal activities.

  12. Complex origins of breadfruit (Artocarpus altilis, Moraceae): implications for human migrations in Oceania.

    PubMed

    Zerega, Nyree J C; Ragone, Diane; Motley, Timothy J

    2004-05-01

    Breadfruit (Artocarpus altilis, Moraceae), a traditional starch crop in Oceania, has enjoyed legendary status ever since its role in the infamous mutiny aboard the H.M.S. Bounty in 1789, yet its origins remain unclear. Breadfruit's closest relatives are A. camansi and A. mariannensis. DNA fingerprinting data (AFLP, amplified fragment length polymorphisms) from over 200 breadfruit cultivars, 30 A. camansi, and 24 A. mariannensis individuals were used to investigate the relationships among these species. Multivariate analyses and the identification of species-specific AFLP markers indicate at least two origins of breadfruit. Most Melanesian and Polynesian cultivars appear to have arisen over generations of vegetative propagation and selection from A. camansi. In contrast, most Micronesian breadfruit cultivars appear to be the result of hybridization between A. camansi-derived breadfruit and A. mariannensis. Because breadfruit depends on humans for dispersal, the data were compared to theories on the human colonization of Oceania. The results agree with the well-supported theory that humans settled Polynesia via Melanesia. Additionally, a long-distance migration from eastern Melanesia into Micronesia is supported.

  13. Antioxidant and antibacterial activities on foodborne pathogens of Artocarpus heterophyllus Lam. (Moraceae) leaves extracts.

    PubMed

    Loizzo, M R; Tundis, R; Chandrika, U G; Abeysekera, A M; Menichini, F; Frega, N G

    2010-06-01

    Total water extract, ethyl acetate, and aqueous fractions from the leaves of Artocarpus heterophyllus were evaluated for phenolic content, antioxidant, and antibacterial activities against some foodborne pathogens such as E. coli, Listeria monocytogenes, Salmonella typhimurium, Salmonella enterica, Bacillus cereus, Enterococcus faecalis, and Staphylococcus aureus. The minimum inhibitory concentration (MICs) of extract and fractions determined by the agar dilution method were ranged from 221.9 microg/mL for ethyl acetate fraction to 488.1 microg/mL for total extract. In the agar diffusion method the diameters of inhibition were 12.2 for the total extract, 10.7 and 11.5 for ethyl acetate and aqueous fractions, respectively. A. heterophyllus showed significant antioxidant activity tested in different in vitro systems (DPPH, ABTS, FRAP, and Fe(2+) chelating activity assay). In particular, in DPPH assay A. heterophyllus total extract exhibited a strong antiradical activity with an IC(50) value of 73.5 microg/mL while aqueous fraction exerted the highest activity in FRAP assay (IC(50) value of 72.0 microg/mL). The total phenols content by Folin-Ciocalteau method was determined with the purpose of testing its relationship with the antioxidant and antibacterial activities.

  14. Antihepatoma activity of Artocarpus communis is higher in fractions with high artocarpin content.

    PubMed

    Tzeng, Cheng-Wei; Yen, Feng-Lin; Lin, Liang-Tzung; Lee, Chiang-Wen; Yen, Ming-Hong; Tzeng, Wen-Sheng; Lin, Chun-Ching

    2014-01-01

    Extracts from natural plants have been used in traditional medicine for many centuries worldwide. Artocarpus communis is one such plant that has been used to treat liver cirrhosis, hypertension, and diabetes. To our knowledge, this study is the first to investigate the antihepatoma activity of A. communis toward HepG2 and PLC/PRF/5 cells and the first to explore the relationship between antihepatoma activity and the active compound artocarpin content in different fractions of A. communis. A. communis methanol extract and fractions induced dose-dependent reduction of tumor cell viability. DNA laddering analysis revealed that A. communis extract and fractions did not induce apoptosis in HepG2 and PLC/PRF/5 cells. Instead, acridine orange staining revealed that A. communis triggered autophagic cell death in a dose-dependent manner. The antihepatoma activity of A. communis is attributable to artocarpin. The fractions with the highest artocarpin content were also the fractions with the highest antihepatoma activity in the following order: dichloromethane fraction > methanol extract > ethyl acetate fraction > n-butanol fraction > n-hexane fraction. Taken together, A. communis showed antihepatoma activity through autophagic cell death. The effect was related to artocarpin content. Artocarpin could be considered an indicator of the anticancer potential of A. communis extract.

  15. Prenylflavonoids isolated from Artocarpus champeden with TRAIL-resistance overcoming activity.

    PubMed

    Minakawa, Tomohiro; Toume, Kazufumi; Arai, Midori A; Koyano, Takashi; Kowithayakorn, Thaworn; Ishibashi, Masami

    2013-12-01

    In a screening program for bioactive natural products which can overcome Tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL)-resistance, three prenylflavonoids, named pannokin A-C, were isolated from a MeOH extract of Artocarpus champeden (Moraceae) roots, together with three known prenylflavonoids. The structures of pannokin A-C were elucidated by spectroscopic analysis. These of the prenylflavonoids in combination with TRAIL, showed cytotoxic activity in sensitizing TRAIL-resistant human gastric adenocarcinoma (AGS) cells. Of these compounds, heterophyllin increased caspase 3/7 activity when combined with TRAIL in AGS cells, and enhanced the expression of DR4 and DR5 mRNA. Moreover, heterophyllin up-regulated mRNA expression of CCAAT/enhancer-binding protein-homologous protein (CHOP) which was reported to be an important regulator of DR5 expression. Thus, heterophyllin was presumed to cause a CHOP-dependent up-regulation of DR5 expression resulting in apoptosis in AGS cells.

  16. A novel serine protease with human fibrino(geno)lytic activities from Artocarpus heterophyllus latex.

    PubMed

    Siritapetawee, Jaruwan; Thumanu, Kanjana; Sojikul, Punchapat; Thammasirirak, Sompong

    2012-07-01

    A protease was isolated and purified from Artocarpus heterophyllus (jackfruit) latex and designated as a 48-kDa antimicrobial protease (AMP48) in a previous publication. In this work, the enzyme was characterized for more biochemical and medicinal properties. Enzyme activity of AMP48 was strongly inhibited by phenylmethanesulfonyl fluoride and soybean trypsin inhibitor, indicating that the enzyme was a plant serine protease. The N-terminal amino acid sequences (A-Q-E-G-G-K-D-D-D-G-G) of AMP48 had no sequence similarity matches with any sequence databases of BLAST search and other plant serine protease. The secondary structure of this enzyme was composed of high α-helix (51%) and low β-sheet (9%). AMP48 had fibrinogenolytic activity with maximal activity between 55 and 60°C at pH 8. The enzyme efficiently hydrolyzed α followed by partially hydrolyzed β and γ subunits of human fibrinogen. In addition, the fibrinolytic activity was observed through the degradation products by SDS-PAGE and emphasized its activity by monitoring the alteration of secondary structure of fibrin clot after enzyme digestion using ATR-FTIR spectroscopy. This study presented the potential role to use AMP48 as antithrombotic for treatment thromboembolic disorders such as strokes, pulmonary emboli and deep vein thrombosis.

  17. Structural characterization of novel chitin-binding lectins from the genus Artocarpus and their antifungal activity.

    PubMed

    Trindade, Melissa B; Lopes, José L S; Soares-Costa, Andréa; Monteiro-Moreira, Ana Cristina; Moreira, Renato A; Oliva, Maria Luiza V; Beltramini, Leila M

    2006-01-01

    Two novel chitin-binding lectins from seeds of Artocarpus genus were described in this paper, one from A. integrifolia (jackfruit) and one from A. incisa (breadfruit). They were purified from saline crude extract of seeds using affinity chromatography on chitin column, size-exclusion chromatography and reverse-phase chromatography on the C-18 column. Both are 14 kDa proteins, made up of 3 chains linked by disulfide bonds. The partial amino acid sequences of the two lectins showed they are homologous to each other but not to other plant chitin-binding proteins. Thus, they cannot be classified in any known plant chitin-binding protein family, particularly because of their inter-chain covalent bonds. Their circular dichroism spectra and deconvolution showed a secondary structure content of beta-sheet and unordered elements. The lectins were thermally stable until 80 degrees C and structural changes were observed below pH 6. Both lectins inhibited the growth of Fusarium moniliforme and Saccharomyces cerevisiae, and presented hemagglutination activity against human and rabbit erythrocytes. These lectins were denoted jackin (from jackfruit) and frutackin (from breadfruit).

  18. Prenylated flavonoids and resveratrol derivatives isolated from Artocarpus communis with the ability to overcome TRAIL resistance.

    PubMed

    Toume, Kazufumi; Habu, Tadashi; Arai, Midori A; Koyano, Takashi; Kowithayakorn, Thaworn; Ishibashi, Masami

    2015-01-23

    In a screening program on natural products that can abrogate tumor necrosis factor (TNF)-related apoptosis-inducing ligand (TRAIL) resistance, four new prenylated flavonoid and resveratrol derivatives (1-4) were isolated from Artocarpus communis, together with eight known prenylflavonoids (5-12). The structures of 1-4 were elucidated spectroscopically. Pannokin D [corrected] (1) (2 μM) and artonin E (5) (3 μM) potently exhibited the ability to overcome TRAIL resistance. Artonin E (5) induced caspase-dependent apoptosis in combination with TRAIL, increased caspase 3/7 activity, and enhanced the protein levels of p53 and DR5. Moreover, this substance decreased cell viability in combination with TRAIL and enhanced the protein levels of DR5, and these effects were mediated by increases in the production of ROS (reactive oxygen species). Thus, artonin E (5) was found to induce extrinsic apoptotic cell death by the ROS- and p53-mediated up-regulation of DR5 expression in AGS cells.

  19. Artocarpus heterophyllus L. seed starch-blended gellan gum mucoadhesive beads of metformin HCl.

    PubMed

    Nayak, Amit Kumar; Pal, Dilipkumar; Santra, Kousik

    2014-04-01

    Jackfruit (Artocarpus heterophyllus Lam., family: Moraceae) seed starch (JFSS)-gellan gum (GG) mucoadhesive beads containing metformin HCl were developed through ionotropic gelation technique. The effect of GG to JFSS ratio and CaCl2 concentration on the drug encapsulation efficiency (DEE, %) and cumulative drug release at 10h (R10h, %) was optimized and analyzed using response surface methodology based on 3(2) factorial design. The optimized JFSS-GG beads containing metformin HCl showed DEE of 92.67±4.46%, R10h of 61.30±2.37%, and mean diameter of 1.67±0.27 mm. The optimized beads showed pH-dependent swelling and mucoadhesivity with the goat intestinal mucosa. The in vitro drug release from all these JFSS-GG beads containing metformin HCl was followed zero-order pattern (R(2)=0.9907-0.9975) with super case-II transport mechanism over a period of 10 h. The beads were also characterized by SEM and FTIR. The optimized JFSS-GG beads containing metformin HCl exhibited significant hypoglycemic effect in alloxan-induced diabetic rats over prolonged period after oral administration.

  20. Artocarpus communis Induces Autophagic Instead of Apoptotic Cell Death in Human Hepatocellular Carcinoma Cells.

    PubMed

    Tzeng, Cheng-Wei; Tzeng, Wen-Sheng; Lin, Liang-Tzung; Lee, Chiang-Wen; Yen, Ming-Hong; Yen, Feng-Lin; Lin, Chun-Ching

    2015-01-01

    For centuries, natural plant extracts have played an important role in traditional medicine for curing and preventing diseases. Studies have revealed that Artocarpus communis possess various bioactivities, such as anti-inflammation, anti-oxidant, and anticancer activities. A. communis offers economic value as a source of edible fruit, yields timber, and is widely used in folk medicines. However, little is known about its molecular mechanisms of anticancer activity. Here, we demonstrate the antiproliferative activity of A. communis methanol extract (AM) and its dichloromethane fraction (AD) in two human hepatocellular carcinoma (HCC) cell lines, HepG2 and PLC/PRF/5. Colony assay showed the long-term inhibitory effect of both extracts on cell growth. DNA laddering and immunoblotting analyses revealed that both extracts did not induce apoptosis in the hepatoma cell lines. AM and AD-treated cells demonstrated different cell cycle distribution compared to UV-treated cells, which presented apoptotic cell death with high sub-G1 ratio. Instead, acridine orange staining revealed that AM and AD triggered autophagosome accumulation. Immunoblotting showed a significant expression of autophagy-related proteins, which indicated the autophagic cell death (ACD) of hepatoma cell lines. This study therefore demonstrates that A. communis AM and its dichloromethane fraction can induce ACD in HCC cells and elucidates the potential of A. communis extracts for development as anti tumor therapeutic agents that utilize autophagy as mechanism in mediating cancer cell death.

  1. Prenylated flavonoids from Artocarpus altilis: antioxidant activities and inhibitory effects on melanin production.

    PubMed

    Lan, Wen-Chun; Tzeng, Cheng-Wei; Lin, Chun-Ching; Yen, Feng-Lin; Ko, Horng-Huey

    2013-05-01

    Flavonoids, 10-oxoartogomezianone (1), 8-geranyl-3-(hydroxyprenyl)isoetin (2), hydroxyartoflavone A (3), isocycloartobiloxanthone (4), and furanocyclocommunin (5), together with 12 known compounds, were isolated from heartwood and cortex of Artocarpus altilis, and their structures were identified by comparing their spectra with those of similar compounds. To identify natural antioxidants and whitening agents, the ability of these prenylated flavonoids was assessed to scavenge the 1,1-diphenyl-2-picrylhydrazyl radical (DPPH), the 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS(+·)) radical cation, and the superoxide anion (O2(-·)), and their abilities to inhibit tyrosinase and melanin production. It was found that compounds 3, 4, and artoflavone A (15) had moderate DPPH(·)-scavenging activity, whereas compound 4 exhibited significant ABTS(+·)-scavenging activity, and that norartocarpetin (7) and artogomezianone (8) exhibited moderate ABTS(+·)-scavenging activity, with compounds 2, 7, and artocarpin (6) displaying good superoxide anion-scavenging activity. In addition, compounds 7, 8, cudraflavone A (14), and artonin M (17), inhibited melanin production by strongly suppressing tyrosinase activity. Compound 6 reduced the melanin content without inhibiting tyrosinase activity. These results suggest that flavonoids isolated from A. altilis may be candidate antioxidants and/or skin-whitening agents. However, further investigations are required to determine their mechanisms of action.

  2. Transcriptome and selected metabolite analyses reveal points of sugar metabolism in jackfruit (Artocarpus heterophyllus Lam.).

    PubMed

    Hu, Lisong; Wu, Gang; Hao, Chaoyun; Yu, Huan; Tan, Lehe

    2016-07-01

    Artocarpus heterophyllus Lam., commonly known as jackfruit, produces the largest tree-borne fruit known thus far. The edible part of the fruit develops from the perianths, and contains many sugar-derived compounds. However, its sugar metabolism is poorly understood. A fruit perianth transcriptome was sequenced on an Illumina HiSeq 2500 platform, producing 32,459 unigenes with an average length of 1345nt. Sugar metabolism was characterized by comparing expression patterns of genes related to sugar metabolism and evaluating correlations with enzyme activity and sugar accumulation during fruit perianth development. During early development, high expression levels of acid invertases and corresponding enzyme activities were responsible for the rapid utilization of imported sucrose for fruit growth. The differential expression of starch metabolism-related genes and corresponding enzyme activities were responsible for starch accumulated before fruit ripening but decreased during ripening. Sucrose accumulated during ripening, when the expression levels of genes for sucrose synthesis were elevated and high enzyme activity was observed. The comprehensive transcriptome analysis presents fundamental information on sugar metabolism and will be a useful reference for further research on fruit perianth development in jackfruit.

  3. Artocarpus gomezianus aided green synthesis of ZnO nanoparticles: luminescence, photocatalytic and antioxidant properties.

    PubMed

    Suresh, D; Shobharani, R M; Nethravathi, P C; Pavan Kumar, M A; Nagabhushana, H; Sharma, S C

    2015-04-15

    We report green synthesis of multifunctional ZnO nanoparticles (NPs) using Artocarpus gomezianus (AG) extract as fuel by solution combustion synthesis. The formation of NPs was confirmed by powder XRD, SEM, TEM and UV-Visible studies. The NPs were subjected for photoluminescence, photodegradative and antioxidant studies. XRD data reveals that the ZnO NPs possess wurtzite structure. UV-Visible spectrum shows absorbance maximum at 370 nm which corresponds to the energy band gap of 3.3 eV. Morphology studies indicate the highly porous nature of the NPs. PL spectra of NPs found to display very interesting blue, green and red emissions upon excitation at 325 nm. The NPs exhibit potential photocatalytic activity towards the degradation of methylene blue (MB) dye upon exposure to sun light and UV light. ZnO NPs found to have considerable antioxidant activity against DPPH (2,2-diphenyl-1-picrylhydrazyl) free radicals. The study successfully demonstrates a simple and eco-friendly method for the synthesis of efficient multifunctional ZnO nanoparticles using green synthetic approach.

  4. Physicochemical properties and in vitro antioxidant activities of polysaccharide from Artocarpus heterophyllus Lam. pulp.

    PubMed

    Zhu, Kexue; Zhang, Yanjun; Nie, Shaoping; Xu, Fei; He, Shuzhen; Gong, Deming; Wu, Gang; Tan, Lehe

    2017-01-02

    A water-soluble polysaccharide from Artocarpus heterophyllus Lam. (jackfruit) pulp (JFP-Ps) was purified and its physicochemical properties were investigated. The in vitro antioxidant activities of JFP-Ps was evaluated by measuring DPPH and OH radicals scavenging activities, as well as reducing power. The results showed that JFP-Ps contained 79.12% of total sugar, 5.83% of protein, 15.65% of uronic acid, and 15 kinds of amino acids with high levels of Asp, Glu, Val, Leu and Lys. JFP-Ps was mainly composed of Rha, Ara, Gal, Glc, Xyl and GalA, with an average molecular weight of 1668kDa. FT-IR results showed the bands at the range of 1200-850cm(-1) suggested the presence of carbohydrates in JFP-Ps. The results of antioxidant activities showed that JFP-Ps exhibited strong DPPH and OH radical scavenging activities, with a relatively lower reducing power, suggesting that JFP-Ps can be exploited as effective natural antioxidant applications in medical and food industries.

  5. Evaluation of genetic diversity in jackfruit (Artocarpus heterophyllus Lam.) based on amplified fragment length polymorphism markers.

    PubMed

    Shyamalamma, S; Chandra, S B C; Hegde, M; Naryanswamy, P

    2008-07-22

    Artocarpus heterophyllus Lam., commonly called jackfruit, is a medium-sized evergreen tree that bears high yields of the largest known edible fruit. Yet, it has been little explored commercially due to wide variation in fruit quality. The genetic diversity and genetic relatedness of 50 jackfruit accessions were studied using amplified fragment length polymorphism markers. Of 16 primer pairs evaluated, eight were selected for screening of genotypes based on the number and quality of polymorphic fragments produced. These primer combinations produced 5976 bands, 1267 (22%) of which were polymorphic. Among the jackfruit accessions, the similarity coefficient ranged from 0.137 to 0.978; the accessions also shared a large number of monomorphic fragments (78%). Cluster analysis and principal component analysis grouped all jackfruit genotypes into three major clusters. Cluster I included the genotypes grown in a jackfruit region of Karnataka, called Tamaka, with very dry conditions; cluster II contained the genotypes collected from locations having medium to heavy rainfall in Karnataka; cluster III grouped the genotypes in distant locations with different environmental conditions. Strong coincidence of these amplified fragment length polymorphism-based groupings with geographical localities as well as morphological characters was observed. We found moderate genetic diversity in these jackfruit accessions. This information should be useful for tree breeding programs, as part of our effort to popularize jackfruit as a commercial crop.

  6. Cytotoxic effects of new geranyl chalcone derivatives isolated from the leaves of Artocarpus communis in SW 872 human liposarcoma cells.

    PubMed

    Fang, Song-Chwan; Hsu, Chin-Lin; Yu, Yu-Shen; Yen, Gow-Chin

    2008-10-08

    Breadfruit (Artocarpus communis Moraceae) is cultivated in tropical and subtropical regions as a traditional starch crop and also has potential medicinal properties. The aim of this work was to study the in vitro anticancer activity of compounds isolated from the leaves of Artocarpus communis. Three new geranyl chalcone derivatives including isolespeol (1), 5'-geranyl-2',4',4-trihydroxychalcone (2), and 3,4,2',4'-tetrahydroxy-3'-geranyldihydrochalcone (3), together with two known compounds lespeol (4) and xanthoangelol (5), were isolated from the leaves of Artocarpus communis. The structures of 1- 5 were elucidated by spectroscopy and through comparison with data reported in the literature. The effects of geranyl chalcone derivatives (1- 5) on the viability of human cancer cells (including SW 872, HT-29, COLO 205, Hep3B, PLC5, Huh7, and HepG2 cells) were investigated. The results indicate that isolespeol (1) showed the highest inhibitory activity with an IC 50 value of 3.8 muM in SW 872 human liposarcoma cells. Treatment of SW 872 human liposarcoma cells with isolespeol (1) caused the loss of mitochondrial membrane potential (DeltaPsim). Western blotting revealed that isolespeol (1) stimulated increased protein expression of Fas, FasL, and p53. The expression ratios of pro- and antiapoptotic Bcl-2 family members were also changed by isolespeol (1) treatment to subsequently induce the activation of caspase-9 and caspase-3, which was followed by cleavage of poly (ADP-ribose) polymerase (PARP). These results demonstrate that isolespeol (1) induces apoptosis in SW 872 cells through Fas- and mitochondria-mediated pathways.

  7. A novel monoterpene-stilbene adduct with a 4,4-dimethyl-2,3-diphenylchromane skeleton from Artocarpus xanthocarpus.

    PubMed

    Ko, Horng-Huey; Jin, Yu-Jing; Lu, Tzy-Ming; Chen, Ih-Sheng

    2013-07-01

    Artoxanthochromane (1), a DielsAlder-type conjugation product of 4-isopropenylresorcinol and oxyresveratrol, was isolated from the heartwood of Artocarpus xanthocarpus and characterized. The structure of 1 was elucidated as 2-(2,4-dihydroxyphenyl)-3-(3,5-dihydroxyphenyl)-7-hydroxy-4,4-dimethylchromane by 1D- and 2D-NMR spectroscopy, and other spectral evidences. A plausible metabolic mechanism was proposed to illustrate the biosynthetic pathway of artoxanthochromane. This compound exhibited mild mushroom tyrosinase inhibitory, and weak free radical-scavenging activities on ABTS(+.) and superoxide anion (O$\\rm{{_{2}^{-{^\\cdot} }}}$) free radicals.

  8. Breadfruit (Artocarpus altilis): a source of high-quality protein for food security and novel food products.

    PubMed

    Liu, Ying; Ragone, Diane; Murch, Susan J

    2015-04-01

    Protein deficiency has been observed as a leading cause of malnutrition and child death in the tropics. The current study evaluated the protein quality of 49 important breadfruit cultivars (41 Artocarpus altilis and 8 hybrids of A. altilis × A. mariannensis). While significant differences were found between cultivars, all varieties contained a full spectrum of the essential amino acids and are especially rich in phenylalanine, leucine, isoleucine, and valine. The cultivar Ma'afala contained significantly higher total essential amino acid content than other varieties and higher-quality protein than staples such as corn, wheat, rice, soybean, potato, and pea.

  9. Breadfruit (Artocarpus altilis) gibberellin 2-oxidase genes in stem elongation and abiotic stress response.

    PubMed

    Zhou, Yuchan; Underhill, Steven J R

    2016-01-01

    Breadfruit (Artocarpus altilis) is a traditional staple tree crop in the Oceania. Susceptibility to windstorm damage is a primary constraint on breadfruit cultivation. Significant tree loss due to intense tropical windstorm in the past decades has driven a widespread interest in developing breadfruit with dwarf stature. Gibberellin (GA) is one of the most important determinants of plant height. GA 2-oxidase is a key enzyme regulating the flux of GA through deactivating biologically active GAs in plants. As a first step toward understanding the molecular mechanism of growth regulation in the species, we isolated a cohort of four full-length GA2-oxidase cDNAs, AaGA2ox1- AaGA2ox4 from breadfruit. Sequence analysis indicated the deduced proteins encoded by these AaGA2oxs clustered together under the C19 GA2ox group. Transcripts of AaGA2ox1, AaGA2ox2 and AaGA2ox3 were detected in all plant organs, but exhibited highest level in source leaves and stems. In contrast, transcript of AaGA2ox4 was predominantly expressed in roots and flowers, and displayed very low expression in leaves and stems. AaGA2ox1, AaGA2ox2 and AaGA2ox3, but not AaGA2ox4 were subjected to GA feedback regulation where application of exogenous GA3 or gibberellin biosynthesis inhibitor, paclobutrazol was shown to manipulate the first internode elongation of breadfruit. Treatments of drought or high salinity increased the expression of AaGA2ox1, AaGA2ox2 and AaGA2ox4. But AaGA2ox3 was down-regulated under salt stress. The function of AaGA2oxs is discussed with particular reference to their role in stem elongation and involvement in abiotic stress response in breadfruit.

  10. Geranyl flavonoid derivatives from the fresh leaves of Artocarpus communis and their anti-inflammatory activity.

    PubMed

    Hsu, Chin-Lin; Chang, Fang-Rong; Tseng, Pei-Yu; Chen, Yi-Fen; El-Shazly, Mohamed; Du, Ying-Chi; Fang, Song-Chwan

    2012-06-01

    Breadfruit (Artocarpus communis) is a widely distributed crop in tropical and subtropical regions of the world. It is used in Southeast Asia and India to treat several inflammatory disorders. The aim of this study was to investigate the presence of anti-inflammatory flavonoids in A. communis leaves. Three new geranyl flavonoids, arcommunol C (1), arcommunol D (3), and 5'-geranyl-3,4,2',4'-tetrahydroxychalcone (5), together with four known compounds, prostratol (2), arcommunol E (4), 3'-geranyl-3,4,2',4'-tetrahydroxydihydrochalcone (6), and 3'-geranyl-3,4,2',4'-tetrahydroxychalcone (7), were isolated from the leaves of A. communis. Compound 4 was isolated for the first time from natural sources. The anti-inflammatory activity of the isolated compounds (1-7) was evaluated by determining their inhibitory activity on the production of proinflammatory mediators in lipopolysaccharide (LPS)-activated RAW 264.7 murine macrophage cells. Compounds 2, 3, and 4 suppressed the LPS-induced production of nitric oxide (NO) in RAW 264.7 cells with IC50 values of 8.13 ± 0.17, 18.45 ± 2.15, and 22.74 ± 1.74 µM, respectively. Furthermore, 2 decreased lipopolysaccharide (LPS)-mediated induction of protein expressions of inducible nitric oxide synthase (iNOS) and cyclooxygenase-2 (COX-2) in RAW 264.7 cells. It was also found that 2 suppressed LPS-induced phosphorylation of JNK and p38 mitogen-activated protein kinase (MAPK) signaling.

  11. Purification and characterization of a trypsin inhibitor from the seeds of Artocarpus heterophyllus Lam.

    PubMed

    Lyu, Junchen; Liu, Yuan; An, Tianchen; Liu, Yujun; Wang, Manchuriga; Song, Yanting; Zheng, Feifei; Wu, Dan; Zhang, Yingxia; Deng, Shiming

    2015-05-01

    A proteinaceous inhibitor against trypsin was isolated from the seeds of Artocarpus heterophyllus Lam. by successive ammonium sulfate precipitation, ion-exchange, and gel-filtration chromatography. The trypsin inhibitor, named as AHLTI (A. heterophyllus Lam. trypsin inhibitor), consisted of a single polypeptide chain with a molecular weight of 28.5 kDa, which was confirmed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and gel-filtration chromatography. The N-terminal sequence of AHLTI was DEPPSELDAS, which showed no similarity to other known trypsin inhibitor sequence. AHLTI completely inhibited bovine trypsin at a molar ratio of 1:2 (AHLTI:trypsin) analyzed by native polyacrylamide gel electrophoresis, inhibition activity assay, and gel-filtration chromatography. Moreover, kinetic enzymatic studies were carried out to understand the inhibition mechanism of AHLTI against trypsin. Results showed that AHLTI was a competitive inhibitor with an equilibrium dissociation constant (Ki) of 3.7 × 10(-8) M. However, AHLTI showed weak inhibitory activity toward chymotrypsin and elastase. AHLTI was stable over a broad range of pH 4-8 and temperature 20-80°C. The reduction agent, dithiothreitol, had no obvious effect on AHLTI. The trypsin inhibition assays of AHLTI toward digestive enzymes from insect pest guts in vitro demonstrated that AHLTI was effective against enzymes from Locusta migratoria manilensis (Meyen). These results suggested that AHLTI might be a novel trypsin inhibitor from A. heterophyllus Lam. belonging to Kunitz family, and play an important role in protecting from insect pest.

  12. SCREENING OF SELECTED BIOLOGICAL ACTIVITIES OF ARTOCARPUS LAKOOCHA ROXB (MORACEAE) FRUIT PERICARP

    PubMed Central

    Shailendra Kumar, M. B.; Rakesh Kumar, M. C.; Bharath, A. C.; Vinod Kumar, H. R.; Prashith Kekuda, T. R.; Nandini, K. C.; Rakshitha, M. N.; Raghavendra, H. L.

    2010-01-01

    Artocarpus lakoocha Roxb (Moraceae) is cultivated in Uttar Pradesh, Bengal, Khasi Hills and Western Ghats. Objectives of the present study were to determine antibacterial, antioxidant, anthelmintic and insecticidal efficacy of methanol extract of A. lakoocha fruit pericarp. Antibacterial activity was tested against by Agar well diffusion method. Antioxidant activity in terms of free radical scavenging ability was determined by DPPH free radical scavenging assay. Anthelmintic efficacy was determined using adult Indian earthworm. Insecticidal activity was tested against second and third instar larvae of Aedes aegypti. The extract has shown dose dependent antibacterial, antioxidant, anthelmintic and insecticidal activity. Among bacteria, S. aureus has shown more susceptibility than K. pneumoniae and P. aeruginosa. The extract exhibited marked antioxidant activity by scavenging DPPH free radical. The IC50 value for extract was found to be 49.42μg/ml. The extract exhibited marked anthelmintic activity by causing paralysis and death of worms and the effect was found to be dose dependent. The extract concentration 100mg/ml has shown marked anthelmintic effect than standard drug. In insecticidal study, the 2nd instar larvae were shown to be more susceptible than 3rd instar larvae. Phytochemical analysis revealed the presence of tannins and alkaloids. The presence of these phytoconstituents might be responsible for the biological activities of extract tested. The extract could be used to treat free radical damage, bacterial and helmintic infections and to control insect vectors. Further studies on isolation of constituents and their bio-efficacies in vitro and in vivo are under investigation. PMID:24825993

  13. The Pan-STARRS Surveys

    NASA Astrophysics Data System (ADS)

    Carter Chambers, Kenneth

    2015-08-01

    The 4 year Pan-STARRS1 Science Mission has now completed and the data will be publicly release by the time of the IAU Assembly. The full data set, including catalogs (100TB database), images (2PB), and metadata, will be available from the STScI MAST archive. The Pan-STARRS1 Surveys include: (1) The 3pi Steradian Survey, (2) The Medium Deep survey of 10 PS1 footprints (7 sq deg each) spaced around the sky; (3) A solar system survey of the ecliptic optimized for the discovery of Near Earth Objects, (4) a Stellar Transit Survey in the galactic bulge; and (5) a time domain Survey of M31.The characteristics of the Pan-STARRS Surveys will be presented, including image quality, depth, cadence, and coverage. Science results span most fields of astronomy from Near Earth Objects to cosmology.The 2nd mission, the Pan-STARRS NEO Survey, is currently underway on PS1 and it will be supplemented by PS2 as it becomes fully operational. PS2 is currently undergoing commissioning and is expected to begin full time science observations with an functional capability similar to PS1 by summer of 2015. The status of PS2 and commissioning data from PS2 will be presented along with a full description of the Pan-STARRS NEO Survey. The prospects for future (beyond 2017) wide field surveys in the Northern Hemisphere will also be discussed.The Pan-STARRS1 Surveys have been made possible through contributions of the Institute for Astronomy of the University of Hawaii; the Pan-STARRS Project Office; the Max-Planck Society and its participating institutes: the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching; The Johns Hopkins University; Durham University; the University of Edinburgh; Queen's University Belfast; the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated; the National Central University of Taiwan; the Space Telescope Science Institute; the National Aeronautics

  14. Electrically controllable artificial PAN muscles

    NASA Astrophysics Data System (ADS)

    Salehpoor, Karim; Shahinpoor, Mohsen; Mojarrad, Mehran

    1996-02-01

    Artificial muscles made with polyacrylonitrile (PAN) fibers are traditionally activated in electrolytic solution by changing the pH of the solution by the addition of acids and/or bases. This usually consumes a considerable amount of weak acids or bases. Furthermore, the synthetic muscle (PAN) itself has to be impregnated with an acid or a base and must have an appropriate enclosure or provision for waste collection after actuation. This work introduces a method by which the PAN muscle may be elongated or contracted in an electric field. We believe this is the first time that this has been achieved with PAN fibers as artificial muscles. In this new development the PAN muscle is first put in close contact with one of the two platinum wires (electrodes) immersed in an aqueous solution of sodium chloride. Applying an electric voltage between the two wires changes the local acidity of the solution in the regions close to the platinum wires. This is because of the ionization of sodium chloride molecules and the accumulation of Na+ and Cl- ions at the negative and positive electrode sites, respectively. This ion accumulation, in turn, is accompanied by a sharp increase and decrease of the local acidity in regions close to either of the platinum wires, respectively. An artificial muscle, in close contact with the platinum wire, because of the change in the local acidity will contract or expand depending on the polarity of the electric field. This scheme allows the experimenter to use a fixed flexible container of an electrolytic solution whose local pH can be modulated by an imposed electric field while the produced ions are basically trapped to stay in the neighborhood of a given electrode. This method of artificial muscle activation has several advantages. First, the need to use a large quantity of acidic or alkaline solutions is eliminated. Second, the use of a compact PAN muscular system is facilitated for applications in active musculoskeletal structures. Third, the

  15. Chryseobacterium artocarpi sp. nov., isolated from the rhizosphere soil of Artocarpus integer.

    PubMed

    Venil, Chidambaram Kulandaisamy; Nordin, Nordiana; Zakaria, Zainul Akmar; Ahmad, Wan Azlina

    2014-09-01

    A bacterial strain, designated UTM-3(T), isolated from the rhizosphere soil of Artocarpus integer (cempedak) in Malaysia was studied to determine its taxonomic position. Cells were Gram-stain-negative, non-spore-forming rods, devoid of flagella and gliding motility, that formed yellow-pigmented colonies on nutrient agar and contained MK-6 as the predominant menaquinone. Comparative analysis of the 16S rRNA gene sequence of strain UTM-3(T) with those of the most closely related species showed that the strain constituted a distinct phyletic line within the genus Chryseobacterium with the highest sequence similarities to Chryseobacterium lactis NCTC 11390(T), Chryseobacterium viscerum 687B-08(T), Chryseobacterium tructae 1084-08(T), Chryseobacterium arthrosphaerae CC-VM-7(T), Chryseobacterium oncorhynchi 701B-08(T), Chryseobacterium vietnamense GIMN1.005(T), Chryseobacterium bernardetii NCTC 13530(T), Chryseobacterium nakagawai NCTC 13529(T), Chryseobacterium gallinarum LMG 27808(T), Chryseobacterium culicis R4-1A(T), Chryseobacterium flavum CW-E2(T), Chryseobacterium aquifrigidense CW9(T), Chryseobacterium ureilyticum CCUG 52546(T), Chryseobacterium indologenes NBRC 14944(T), Chryseobacterium gleum CCUG 14555(T), Chryseobacterium jejuense JS17-8(T), Chryseobacterium oranimense H8(T) and Chryseobacterium joostei LMG 18212(T). The major whole-cell fatty acids were iso-C15 : 0 and iso-C17 : 1ω9c, followed by summed feature 4 (iso-C15 : 0 2-OH and/or C16 : 1ω7t) and iso-C17 : 0 3-OH, and the polar lipid profile consisted of phosphatidylethanolamine and several unknown lipids. The DNA G+C content strain UTM-3(T) was 34.8 mol%. On the basis of the phenotypic and phylogenetic evidence, it is concluded that the isolate represents a novel species of the genus Chryseobacterium, for which the name Chryseobacterium artocarpi sp. nov. is proposed. The type strain is UTM-3(T) ( = CECT 8497(T) = KCTC 32509(T)).

  16. Removal of the methyl violet 2B dye from aqueous solution using sustainable adsorbent Artocarpus odoratissimus stem axis

    NASA Astrophysics Data System (ADS)

    Kooh, Muhammad Raziq Rahimi; Dahri, Muhammad Khairud; Lim, Linda B. L.

    2016-10-01

    This study investigates the potential of the stem axis of Artocarpus odoratissimus fruit (TSA) as an adsorbent for the removal of methyl violet 2B (MV). The functional group analysis was carried out using Fourier-transform infrared spectroscopy. Investigation of the effects of pH and ionic strength provide insights on the involvement of electrostatic attraction and hydrophobic-hydrophobic attraction between the adsorbent and adsorbates. Kinetics models (pseudo-first-order, pseudo-second-order, Weber-Morris and Boyd) and isotherm models (Langmuir, Freundlich and Dubinin-Raduskevich) were used for characterising the adsorption process. The Langmuir model predicted a high q m of 263.7 mg g-1. Thermodynamics studies indicate the adsorption system is spontaneous, endothermic and physical sorption dominant. The spent adsorbent was successfully regenerated using water and obtained adsorption capacity close to the unused adsorbent even after fifth cycle of washing.

  17. Isolation and identification of mosquito (Aedes aegypti ) biting deterrent fatty acids from male inflorescences of breadfruit (Artocarpus altilis (Parkinson) Fosberg).

    PubMed

    Jones, A Maxwell P; Klun, Jerome A; Cantrell, Charles L; Ragone, Diane; Chauhan, Kamlesh R; Brown, Paula N; Murch, Susan J

    2012-04-18

    Dried male inflorescences of breadfruit ( Artocarpus altilis , Moraceae) are burned in communities throughout Oceania to repel flying insects, including mosquitoes. This study was conducted to identify chemicals responsible for mosquito deterrence. Various crude extracts were evaluated, and the most active, the hydrodistillate, was used for bioassay-guided fractionation. The hydrodistillate and all fractions displayed significant deterrent activity. Exploratory GC-MS analysis revealed more than 100 distinctive peaks, and more than 30 compounds were putatively identified, including a mixture of terpenes, aldehydes, fatty acids, and aromatics. A systematic bioassay-directed study using adult Aedes aegypti females identified capric, undecanoic, and lauric acid as primary deterrent constituents. A synthetic mixture of fatty acids present in the most active fraction and individual fatty acids were all significantly more active than N,N-diethyl-m-toluamide (DEET). These results provide support for this traditional practice and indicate the potential of male breadfruit flowers and fatty acids as mosquito repellents.

  18. New development and validation of 50 SSR markers in breadfruit (Artocarpus altilis, Moraceae) by next-generation sequencing1

    PubMed Central

    De Bellis, Fabien; Malapa, Roger; Kagy, Valérie; Lebegin, Stéphane; Billot, Claire; Labouisse, Jean-Pierre

    2016-01-01

    Premise of the study: Using next-generation sequencing technology, new microsatellite loci were characterized in Artocarpus altilis (Moraceae) and two congeners to increase the number of available markers for genotyping breadfruit cultivars. Methods and Results: A total of 47,607 simple sequence repeat loci were obtained by sequencing a library of breadfruit genomic DNA with an Illumina MiSeq system. Among them, 50 single-locus markers were selected and assessed using 41 samples (39 A. altilis, one A. camansi, and one A. heterophyllus). All loci were polymorphic in A. altilis, 44 in A. camansi, and 21 in A. heterophyllus. The number of alleles per locus ranged from two to 19. Conclusions: The new markers will be useful for assessing the identity and genetic diversity of breadfruit cultivars on a small geographical scale, gaining a better understanding of farmer management practices, and will help to optimize breadfruit genebank management. PMID:27610273

  19. Green synthesis of gold nanoparticles using extracts of Artocarpus Lakoocha fruit and its leaves, and Eriobotrya Japonica leaves

    NASA Astrophysics Data System (ADS)

    Sharma, Ankita; Dhiman, Naresh; Singh, Bhanu P.; Gathania, Arvind K.

    2014-04-01

    Gold nanoparticles (AuNPs) synthesis is demonstrated successfully using fresh young leaves of Artocarpus Lakoocha (A. Lakoocha), fruit pulp of A. Lakoocha and loquat (Eriobotrya Japonica) leaves. We have also compared green synthesis with chemical assisted tri-n-octyl-phosphine (TOP) stabilized gold nanoparticles. Samples were characterized with transmission electron microscopy (TEM), Fourier transform infrared spectroscopy and UV-Visible spectroscopy. TEM images have shown that the average size of the particles is 15.06, 36.8 and 25.08 nm for A. Lakoocha fruits, A. Lakoocha leaves and loquat leaves assisted gold nanoparticles, respectively. Hydrogen tetrachloroaurate is reduced and AuNPs are stabilized by phenols, hydroxyls and carboxyls groups such as terpenoids, flavonoids, tannins etc, present in young leaves and fruit extracts. It was observed that green synthesis using botanical extracts is a cost effective and non- toxic way for nanoparticle preparation.

  20. The Pan-STARRS Surveys

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.; Pan-STARRS Team

    2016-01-01

    The 4 year Pan-STARRS1 Science Mission has now completed and the final data processing and database ingest is underway. We expect to have the public release of the PS1 Survey data at approximately the time of the AAS Meeting. The full data set, including catalogs (150 Terabyte database), images (2 Petabytes), and metadata, will be available from the STScI MASTarchive. The Pan-STARRS1 Surveys include: (1) The 3pi Steradian Survey, (2) The Medium Deep survey of 10 PS1 footprints (7 sq deg each) spaced around the sky; (3) A solar system survey of the ecliptic optimized for the discovery of Near Earth Objects, (4) a Stellar Transit Survey in the galactic bulge; and (5) a time domain Survey of M31. The characteristics of the Pan-STARRS1 Surveys will be presented, including image quality, depth, cadence, and coverage. Science results span most fields of astronomy from Near Earth Objects to cosmology. The 2nd mission, the Pan-STARRS NEO Survey, is currently underway on PS1 and it will be supplemented by PS2 observations as PS2 becomes fully operational. We will also report on the status of PS2 and the prospects for future wide field surveys in the Northern Hemisphere. The Pan-STARRS1 Surveys have been made possible through contributions of the Institute for Astronomy of the University of Hawaii; the Pan-STARRS Project Office; the Max-Planck Society and its participating institutes: the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching; The Johns Hopkins University; Durham University; the University of Edinburgh; Queen's University Belfast; the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated; the National Central University of Taiwan; the Space Telescope Science Institute; the National Aeronautics and Space Administration under Grant No. NNX08AR22G issued through the Planetary Science Division of the NASA Science Mission Directorate; the National

  1. Kinematic measurement from panned cinematography.

    PubMed

    Gervais, P; Bedingfield, E W; Wronko, C; Kollias, I; Marchiori, G; Kuntz, J; Way, N; Kuiper, D

    1989-06-01

    Traditional 2-D cinematography has used a stationary camera with its optical axis perpendicular to the plane of motion. This method has constrained the size of the object plane or has introduced potential errors from a small subject image size with large object field widths. The purpose of this study was to assess a panning technique that could overcome the inherent limitations of small object field widths, small object image sizes and limited movement samples. The proposed technique used a series of reference targets in the object field that provided the necessary scales and origin translations. A 102 m object field was panned. Comparisons between criterion distances and film measured distances for field widths of 46 m and 22 m resulted in absolute mean differences that were comparable to that of the traditional method.

  2. Roll formed pan solar module

    SciTech Connect

    Jester, T.L.; Bottenberg, W.R.; Gay, C.F.; Yerkes, J.W.

    1984-02-21

    A solar module comprising a solar cell string laminated between layers of pottant material and a transparent superstrate and a steel substrate. The steel substrate is roll formed to provide stiffening flanges on its edges while simultaneously forming a pan-shaped structure to hold other portions of the laminate in position during the laminating process. An improved terminal provides high voltage protection and improved mechanical strength. A conduit element provides protected raceways for external wires connected to module terminals.

  3. Antiproliferative effect of T/Tn specific Artocarpus lakoocha agglutinin (ALA) on human leukemic cells (Jurkat, U937, K562) and their imaging by QD-ALA nanoconjugate.

    PubMed

    Chatterjee, Urmimala; Bose, Partha Pratim; Dey, Sharmistha; Singh, Tej P; Chatterjee, Bishnu P

    2008-11-01

    T/Tn specificity of Artocarpus lakoocha agglutinin (ALA), isolated from the seeds of A. lakoocha (Moraceae) fruit and a heterodimer (16 kD and 12 kD) of molecular mass 28 kD, was further confirmed by SPR analysis using T/Tn glycan containing mammalian glycoproteins. N-terminal amino acid sequence analysis of ALA showed homology at 15, 19-21, 24-27, and 29 residues with other lectin members of Moraceae family viz., Artocarpus integrifolia (jacalin) lectin, Artocarpus hirsuta lectin, and Maclura pomifera agglutinin. It is mitogenic to human PBMC and the maximum proliferation was observed at 1 ng/ml. It showed an antiproliferative effect on leukemic cells, with the highest effect toward Jurkat cells (IC(50) 13.15 ng/ml). Synthesized CdS quantum dot-ALA nanoconjugate was employed to detect the expression of T/Tn glycans on Jurkat, U937, and K562 leukemic cells surfaces as well as normal lymphocytes by fluorescence microscopy. No green fluorescence was observed with normal lymphocytes indicating that T/Tn determinants, which are recognized as human tumor associated structures were cryptic on normal lymphocyte surfaces, whereas intense green fluorescent dots appeared during imaging of leukemic cells, where such determinants were present in unmasked form. The above results indicated that QD-ALA nanoconjugate is an efficient fluorescent marker for identification of leukemic cell lines that gives rise to high quality images.

  4. Skeletal development in Pan paniscus with comparisons to Pan troglodytes.

    PubMed

    Bolter, Debra R; Zihlman, Adrienne L

    2012-04-01

    Fusion of skeletal elements provides markers for timing of growth and is one component of a chimpanzee's physical development. Epiphyseal closure defines bone growth and signals a mature skeleton. Most of what we know about timing of development in chimpanzees derives from dental studies on Pan troglodytes. Much less is known about the sister species, Pan paniscus, with few in captivity and a wild range restricted to central Africa. Here, we report on the timing of skeletal fusion for female captive P. paniscus (n = 5) whose known ages range from 0.83 to age 11.68 years. Observations on the skeletons were made after the individuals were dissected and bones cleaned. Comparisons with 10 female captive P. troglodytes confirm a generally uniform pattern in the sequence of skeletal fusion in the two captive species. We also compared the P. paniscus to a sample of three unknown-aged female wild P. paniscus, and 10 female wild P. troglodytes of known age from the Taï National Park, Côte d'Ivoire. The sequence of teeth emergence to bone fusion is generally consistent between the two species, with slight variations in late juvenile and subadult stages. The direct-age comparisons show that skeletal growth in captive P. paniscus is accelerated compared with both captive and wild P. troglodytes populations. The skeletal data combined with dental stages have implications for estimating the life stage of immature skeletal materials of wild P. paniscus and for more broadly comparing the skeletal growth rates among captive and wild chimpanzees (Pan), Homo sapiens, and fossil hominins.

  5. Deployable Pan-Flavivirus and Pan-alphavirus Assays for Screening Pools of Medically Relevant Arthropod

    DTIC Science & Technology

    2011-09-01

    SUBTITLE 5a. CONTRACT NUMBER W81XWH-11-C-0046 “Deployable Pan-flavivirus and Pan- alphavirus Assays 5b. GRANT NUMBER for Screening Pools of...hybridization, detection and data analysis. We used our bioinformatic system called Genotyper to create an updated pan-flavivirus and pan- alphavirus ... alphaviruses , with near single copy detection in a single reaction/detection assay. The detection device itself is hand-held and requires only a USB

  6. Initial Burn Pan (JMTF) Testing Results

    DTIC Science & Technology

    2016-03-01

    Hansen & A. Balsley Public | March 2016 2.3 Burn Pan Water During filling of the burn pan, a high volume submersible pump was placed on a small...platform located between the Ex-USS Shadwell and LSI. The water used to fill the burn pan was drawn directly from Mobile Bay. The pump was connected to...Figure 6. The fuel tank was equipped with an integral electric pump that was used to supply the fuel to the burn pan during the test. The fuel tank

  7. A Hundred Years of Peter Pan

    ERIC Educational Resources Information Center

    Hollindale, Peter

    2005-01-01

    The centenary of the first performance of J. M. Barrie's Peter Pan was celebrated in December 2004. Taking account of the various events in Britain to mark the occasion--newspaper articles, radio and television programmes, retrospects in the original theatre--this article examines the status and popularity of Peter Pan after a hundred years. The…

  8. Peroxyacetyl nitrate (PAN) in the urban atmosphere.

    PubMed

    Lee, Jun-Bok; Yoon, Joong-Sup; Jung, Kweon; Eom, Seok-Won; Chae, Young-Zoo; Cho, Seog-Ju; Kim, Shin-Do; Sohn, Jong Ryeul; Kim, Ki-Hyun

    2013-11-01

    Peroxyacetyl nitrate (PAN) in air has been well known as the indicator of photochemical smog due to its frequent occurrences in Seoul metropolitan area. This study was implemented to assess the distribution characteristics of atmospheric PAN in association with relevant parameters measured concurrently. During a full year period in 2011, PAN was continuously measured at hourly intervals at two monitoring sites, Gwang Jin (GJ) and Gang Seo (GS) in the megacity of Seoul, South Korea. The annual mean concentrations of PAN during the study period were 0.64±0.49 and 0.57±0.46 ppb, respectively. The seasonal trends of PAN generally exhibited dual peaks in both early spring and fall, regardless of sites. Their diurnal trends were fairly comparable to each other. There was a slight time lag (e.g., 1 h) in the peak occurrence pattern between O3 and PAN, as the latter trended to peak after the maximum UV irradiance period (16:00 (GJ) and 17:00 (GS)). The concentrations of PAN generally exhibited strong correlations with particulates. The results of this study suggest that PAN concentrations were affected sensitively by atmospheric stability, the wet deposition of NO2, wind direction, and other factors.

  9. Peter Pan: The Text and the Myth.

    ERIC Educational Resources Information Center

    Hollindale, Peter

    1993-01-01

    Shows how the critical reception of J. M. Barrie's "Peter Pan" has varied widely since its publication. Describes the mythical qualities of the Peter Pan character and gives reasons why the story is still popular with children and why it should continue to be taught and read. (HB)

  10. African Drum and Steel Pan Ensembles.

    ERIC Educational Resources Information Center

    Sunkett, Mark E.

    2000-01-01

    Discusses how to develop both African drum and steel pan ensembles providing information on teacher preparation, instrument choice, beginning the ensemble, and lesson planning. Includes additional information for the drum ensembles. Lists references and instructional materials, sources of drums and pans, and common note layout/range for steel pan…

  11. Dry deposition of pan to grassland vegetation

    SciTech Connect

    Doskey, P.V.; Wesely, M.L.; Cook, D.R.; Gao, W.

    1994-01-01

    Peroxyacetyl nitrate or PAN (CH{sub 3}C(O)OONO{sub 2}) is formed in the lower troposphere via photochemical reactions involving nitrogen oxides (NO{sub x}) and non-methane hydrocarbons (NMHCs). PAN has a lifetime in the free troposphere of about three months and is removed by photolysis or reaction with OH. Dry deposition will decrease its lifetime, although the few measurements that have been made indicate that this process is slow. Measurements of the uptake of PAN by alfalfa in growth chambers indicated that the dry deposition velocity (downward flux divided by concentration at a specified height) was 0.75 cm s{sup {minus}1}. Garland and Penkett measured a dry deposition velocity of 0.25 cm s{sup {minus}1} for PAN to grass and soil in a return-flow wind tunnel. Shepson et al. (1992) analyzed trends of PAN and O{sub 3} concentrations in the stable nocturnal boundary layer over mixed deciduous/coniferous forests at night, when leaf stomata were closed, and concluded that the deposition velocity for PAN was at least 0.5 cm s{sup {minus}1}. We measured the dry deposition velocity of PAN to a grassland site in the midwestern United States with a modified Bowen ratio technique. Experiments were conducted on selected days during September, October, and November of 1990. An energy balance Bowen ratio station was used to observe the differences in air temperature and water vapor content between heights of 3.0 and 0.92 m and to evaluate the surface energy balance. Air samples collected at the same two heights in Teflon {reg_sign} bags were analyzed for PAN by a gas chromatographic technique. We present an example of the variations of PAN concentrations and gradients observed during the day and compare measurements of the dry deposition velocity to expectations based on the physicochemical properties of PAN.

  12. Protective effects of Artocarpus altilis (Moraceae) on cadmium-induced changes in sperm characteristics and testicular oxidative damage in rats.

    PubMed

    Adaramoye, O A; Akanni, O O

    2016-03-01

    Cadmium (Cd) is a major environmental toxicant and an endocrine disruptor. We investigated the protective effects of methanol extract of Artocarpus altilis (AA) against Cd-induced testicular damage in rats while quercetin (Que) served as standard. The total flavonoids and phenolic contents (TFC and TPC), 2, 2-diphenyl-1-picrylhydrazyl (DPPH) and hydroxyl (OH) radicals scavenging activities of AA were determined. In vivo, thirty male Wistar rats were assigned to six groups and orally treated with corn oil (control), Cd alone, Cd+Que, Cd+AA, Que and AA alone. Que and AA were given at doses of 25 and 200 mg kg(-1), respectively, for 3 weeks and challenged with two doses of Cd (1.5 mg kg(-1)). Results showed that TFC and TPC of AA increased with increase in concentration. AA scavenged DPPH and OH radicals in a dose-dependent manner. Administration of Cd significantly increased the relative weight of testis of rats. Lipid peroxidation was significantly increased while antioxidant parameters decreased in testis of Cd-treated rats. Also, Cd-treated rats had significantly reduced sperm count, motility, sialic acid, luteinising hormone and testosterone relative to controls. Pre-treatment with AA or Que significantly attenuated the biochemical alterations observed in Cd-treated rats. Overall, AA protects against Cd-induced testicular damage via antioxidative mechanism.

  13. Batch and continuous (fixed-bed column) biosorption of crystal violet by Artocarpus heterophyllus (jackfruit) leaf powder.

    PubMed

    Saha, Papita Das; Chakraborty, Sagnik; Chowdhury, Shamik

    2012-04-01

    In this study, batch and fixed-bed column experiments were performed to investigate the biosorption potential of Artocarpus heterophyllus (jackfruit) leaf powder (JLP) to remove crystal violet (CV) from aqueous solutions. Batch biosorption studies were carried out as a function of solution pH, contact time, initial dye concentration and temperature. The biosorption equilibrium data showed excellent fit to the Langmuir isotherm model with maximum monolayer biosorption capacity of 43.39 mg g(-1) at pH 7.0, initial dye concentration=50 mg L(-1), temperature=293 K and contact time=120 min. According to Dubinin-Radushkevich (D-R) isotherm model, biosorption of CV by JLP was chemisorption. The biosorption kinetics followed the pseudo-second-order kinetic model. Thermodynamic analysis revealed that biosorption of CV from aqueous solution by JLP was a spontaneous and exothermic process. In order to ascertain the practical applicability of the biosorbent, fixed-bed column studies were also performed. The breakthrough time increased with increasing bed height and decreased with increasing flow rate. The Thomas model as well as the BDST model showed good agreement with the experimental results at all the process parameters studied. It can be concluded that JLP is a promising biosorbent for removal of CV from aqueous solutions.

  14. In vitro conservation and sustained production of breadfruit ( Artocarpus altilis, Moraceae): modern technologies for a traditional tropical crop

    NASA Astrophysics Data System (ADS)

    Murch, Susan J.; Ragone, Diane; Shi, Wendy Lei; Alan, Ali R.; Saxena, Praveen K.

    2008-02-01

    Breadfruit ( Artocarpus altilis, Moraceae) is a traditionally cultivated, high-energy, high-yield crop, but widespread use of the plant for food is limited by poor quality and poor storage properties of the fruit. A unique field genebank of breadfruit species and cultivars exists at the National Tropical Botanical Garden in the Hawaiian Islands and is an important global resource for conservation and sustainable use of breadfruit. However, this plant collection could be damaged by a random natural disaster such as a hurricane. We have developed a highly efficient in vitro plant propagation system to maintain, conserve, mass propagate, and distribute elite varieties of this important tree species. Mature axillary shoot buds were collected from three different cultivars of breadfruit and proliferated using a cytokinin-supplemented medium. The multiple shoots were maintained as stock cultures and repeatedly used to develop whole plants after root differentiation on a basal or an auxin-containing medium. The plantlets were successfully grown under greenhouse conditions and were reused to initiate additional shoot cultures for sustained production of plants. Flow cytometry was used to determine the nuclear deoxyribonucleic acid content and the ploidy status of the in vitro grown population. The efficacy of the micropropagation protocols developed in this study represents a significant advancement in the conservation and sustained mass propagation of breadfruit germplasm in a controlled environment free from contamination.

  15. In vitro conservation and sustained production of breadfruit (Artocarpus altilis, Moraceae): modern technologies for a traditional tropical crop.

    PubMed

    Murch, Susan J; Ragone, Diane; Shi, Wendy Lei; Alan, Ali R; Saxena, Praveen K

    2008-02-01

    Breadfruit (Artocarpus altilis, Moraceae) is a traditionally cultivated, high-energy, high-yield crop, but widespread use of the plant for food is limited by poor quality and poor storage properties of the fruit. A unique field genebank of breadfruit species and cultivars exists at the National Tropical Botanical Garden in the Hawaiian Islands and is an important global resource for conservation and sustainable use of breadfruit. However, this plant collection could be damaged by a random natural disaster such as a hurricane. We have developed a highly efficient in vitro plant propagation system to maintain, conserve, mass propagate, and distribute elite varieties of this important tree species. Mature axillary shoot buds were collected from three different cultivars of breadfruit and proliferated using a cytokinin-supplemented medium. The multiple shoots were maintained as stock cultures and repeatedly used to develop whole plants after root differentiation on a basal or an auxin-containing medium. The plantlets were successfully grown under greenhouse conditions and were reused to initiate additional shoot cultures for sustained production of plants. Flow cytometry was used to determine the nuclear deoxyribonucleic acid content and the ploidy status of the in vitro grown population. The efficacy of the micropropagation protocols developed in this study represents a significant advancement in the conservation and sustained mass propagation of breadfruit germplasm in a controlled environment free from contamination.

  16. Phytochemical screening and evaluation of in vitro angiotensin-converting enzyme inhibitory activity of Artocarpus altilis leaf.

    PubMed

    Siddesha, Jalahalli M; Angaswamy, Nataraju; Vishwanath, Bannikuppe S

    2011-12-01

    This study investigates the effect of Artocarpus altilis leaf extracts on angiotensin-converting enzyme (ACE) activity. Among the extracts tested, hot ethanol extract exhibited a potent ACE-inhibitory activity with an IC₅₀ value of 54.08 ± 0.29 µg mL⁻¹ followed by cold ethyl acetate extract (IC₅₀ of 85.44 ± 0.85 µg mL⁻¹). In contrast, the hot aqueous extracts showed minimum inhibition with the IC₅₀ value of 765.52 ± 11.97 µg mL⁻¹ at the maximum concentration tested. Further, the phytochemical analysis indicated the varied distribution of tannins, phenolics, glycosides, saponins, steroids, terpenoids and anthraquinones in cold and hot leaf extracts. The correlation between the phytochemical analysis and ACE-inhibitory activity suggests that the high content of glycosidic and phenolic compounds could be involved in exerting ACE-inhibitory activity. In conclusion, this study supports the utilisation of A. altilis leaf in the folk medicine for the better treatment of hypertension. Further studies on isolation and characterisation of specific ACE-inhibitory molecule(s) from ethyl acetate, ethanol and methanol extracts of A. altilis leaf would be highly interesting.

  17. Artocarpus altilis (Parkinson) Fosberg Extracts and Geranyl Dihydrochalcone Inhibit STAT3 Activity in Prostate Cancer DU145 Cells.

    PubMed

    Jeon, Yoon Jung; Jung, Seung-Nam; Chang, Hyeyoun; Yun, Jieun; Lee, Chang Woo; Lee, Joonku; Choi, Sangho; Nash, Oyekanmi; Han, Dong Cho; Kwon, Byoung-Mog

    2015-05-01

    Artocarpus altilis (Parkinson) Fosberg has traditionally been used in Indonesia for the treatment of liver cirrhosis, hypertension, and diabetes. In many other countries, it is used for the treatment of malaria, yellow fever, and dengue fever. It has been reported that A. altilis extracts have antiatherosclerotic and cytoprotective effects, but its molecular targets in tumor cells are not yet fully understood. The A. altilis extracts and the partially purified fraction have been shown to inhibit STAT3 activity and the phosphorylation of STAT3 in a dose-dependent manner. To identify the active components, a bioassay-guided isolation of the partially purified fraction resulted in the identification of a geranyl dihydrochalcone, CG901. Its chemical structure was established on the basis of spectroscopic evidence and comparison with published data. The partially purified fraction and the isolated a geranyl dihydrochalcone, CG901, down-regulated the expression of STAT3 target genes, induced apoptosis in DU145 prostate cancer cells via caspase-3 and PARP degradation, and inhibited tumor growth in human prostate tumor (DU145) xenograft initiation model. These results suggest that A. altilis could be a good natural source and that the isolated compound will be a potential lead molecule for developing novel therapeutics against STAT3-related diseases, including cancer and inflammation.

  18. Antioxidant Potential of Lingzhi or Reishi Medicinal Mushroom, Ganoderma lucidum (Higher Basidiomycetes) Cultivated on Artocarpus heterophyllus Sawdust Substrate in India.

    PubMed

    Rani, P; Lal, Merlin Rajesh; Maheshwari, Uma; Krishnan, Sreeram

    2015-01-01

    The artificial cultivation of Ganoderma lucidum (MTCC1039) using Artocarpus heterophyllus as sawdust substrate was optimized and free radical scavenging activities of the generated fruiting bodies were investigated. The choice of A. heterophyllus as substrate was due to its easy availability in South India. Sawdust supplemented with dextrose medium yielded better spawn hyphae and early fruiting body initiation (15 days). The biological yield obtained was 42.06 ± 2.14 g/packet and the biological efficiency was 8.41 ± 0.48%. Both aqueous and methanolic extracts of fruiting body were analyzed for radical scavenging activity. Methanolic extract showed maximum scavenging activity for 1,1-diphenyl-2-picrylhydrazyl (IC50 = 290 μg/ml) and 2,2'-azino-bis(3-ethylbenzothiazoline- 6-sulphonic acid (IC50 = 580 μg/ml), whereas aqueous extract had better scavenging for ferric reducing antioxidant power (IC50 = 5 μg/ml). Total phenolic content and total antioxidant capacity were significantly higher in methanolic extract (p < 0.01). A positive correlation existed between the phenolic content and antioxidant activity. Our results indicated that fruiting bodies of G. lucidum cultivated in sawdust medium possess antioxidant property, which can be exploited for therapeutic application.

  19. Effects of seed mass on seedling success in Artocarpus heterophyllus L., a tropical tree species of north-east India

    NASA Astrophysics Data System (ADS)

    Khan, M. L.

    2004-03-01

    I examined the effects of seed mass on performance of seedlings of Artocarpus heterophyllus L. (Moraceae), a large evergreen late successional shade-tolerant tree species in three contrasting light conditions. Seed mass varied many fold from 1.5 to 14 g in A. heterophyllus. Germination and germination time showed a significant correlation with seed mass. Germination differed significantly among three light regimes (50%, 25% and 3%). Seed mass and light level significantly affected seedling survival. The seedlings that emerged from large seeds survived better than those from small seeds under all light regimes. Survival of seedlings was maximum in 25% light regime for all seed mass classes but did not differ significantly from that at 50% light regime. Survival was significantly lower in 3% light as compared to 50% and 25% light regimes. Seedling vigor (expressed in terms of seedling height, leaf area and dry weight) was also significantly affected by seed mass and light regimes. Seedlings that emerged from larger seeds and grew under 50% light regime produced the heaviest seedlings, while those resulting from smaller seeds and grown under 3% light regime produced the lightest seedlings. Resprouting capacity of seedlings after clipping was significantly affected by seed mass and light regime. Seedlings emerging from larger seeds were capable of resprouting several times successively. Resprouting was more pronounced under 50% and 25% light regimes as compared to 3% light. Success of A. heterophyllus regeneration appears to be regulated by an interactive effect of seed mass and light regime.

  20. Investigation of active biomolecules involved in the nucleation and growth of gold nanoparticles by Artocarpus heterophyllus Lam leaf extract

    NASA Astrophysics Data System (ADS)

    Jiang, Xinde; Sun, Daohua; Zhang, Genlei; He, Ning; Liu, Hongyu; Huang, Jiale; Odoom-Wubah, Tareque; Li, Qingbiao

    2013-06-01

    The effects of different biomolecules in Artocarpus heterophyllus Lam leaf extract on the morphology of obtained gold nanoparticles were investigated in this study. The results indicated that reducing sugars, flavones, and polyphenols consisting of about 79.8 % dry weight of the leaf extract were mainly involved in providing the dual function of reduction and the size/shape control during the biosynthesis. The gold nanoparticles present included 64 ± 10 nm nanospheres, 131 ± 18 nm nanoflowers, and 347 ± 136 nm (edge length) nanoplates and they were synthesized using the main content of reducing sugars, flavones, and polyphenols, respectively, after they were desorbed by the AB-8 macroporous adsorption resin column. Particularly, flower-like and triangular/hexagonal gold nanoparticles with a yield more than 80 % were obtained. Possible shape-directed agents for the nucleation and growth were characterized by FTIR, it can be seen that ketones were bound on the surface of the spherical and flower-like GNPs, while both the ketones and carbonyls bound on the Au {111} plane this may have favored the formation of the twin defects, which are very essential for nanoplates' formation.

  1. Purification and characterization of a heteromultimeric glycoprotein from Artocarpus heterophyllus latex with an inhibitory effect on human blood coagulation.

    PubMed

    Siritapetawee, Jaruwan; Thammasirirak, Sompong

    2011-01-01

    Plant latex has many health benefits and has been used in folk medicine. In this study, the biological effect of Artocarpus heterophyllus (jackfruit) latex on human blood coagulation was investigated. By a combination of heat precipitation and ion-exchange chromatography, a heat stable heteromultimeric glycoprotein (HSGPL1) was purified from jackfruit milky latex. The apparent molecular masses of the monomeric proteins on SDS/PAGE were 33, 31 and 29 kDa. The isoelectric points (pIs) of the monomers were 6.63, 6.63 and 6.93, respectively. Glycosylation and deglycosylation tests confirmed that each subunit of HSGPL1 formed the native multimer by sugar-based interaction. Moreover, the multimer of HSGPL1 also resisted 2-mercaptoethanol action. Peptide mass fingerprint analysis indicated that HSGPL1 was a complex protein related to Hsps/chaperones. HSGPL1 has an effect on intrinsic pathways of the human blood coagulation system by significantly prolonging the activated partial thrombin time (APTT). In contrast, it has no effect on the human extrinsic blood coagulation system using the prothrombin time (PT) test. The prolonged APTT resulted from the serine protease inhibitor property of HSGPL1, since it reduced activity of human blood coagulation factors XI(a) and α-XII(a).

  2. Differences in evaporation between a floating pan and class a pan on land

    USGS Publications Warehouse

    Masoner, J.R.; Stannard, D.I.; Christenson, S.C.

    2008-01-01

    Research was conducted to develop a method for obtaining floating pan evaporation rates in a small (less than 10,000 m2) wetland, lagoon, or pond. Floating pan and land pan evaporation data were collected from March 1 to August 31, 2005, at a small natural wetland located in the alluvium of the Canadian River near Norman, Oklahoma, at the U.S. Geological Survey Norman Landfill Toxic Substances Hydrology Research Site. Floating pan evaporation rates were compared with evaporation rates from a nearby standard Class A evaporation pan on land. Floating pan evaporation rates were significantly less than land pan evaporation rates for the entire period and on a monthly basis. Results indicated that the use of a floating evaporation pan in a small free-water surface better simulates actual physical conditions on the water surface that control evaporation. Floating pan to land pan ratios were 0.82 for March, 0.87 for April, 0.85 for May, 0.85 for June, 0.79 for July, and 0.69 for August. ?? 2008 American Water Resources Association.

  3. Handedness in captive bonobos (Pan paniscus).

    PubMed

    Harrison, Rebecca M; Nystrom, Pia

    2008-01-01

    Species level right-handedness is often considered to be unique to humans. Handedness is held to be interrelated to our language ability and has been used as a means of tracing the evolution of language. Here we examine handedness in 3 captive groups of bonobos (Pan paniscus) comprising 22 individuals. We found no evidence for species level handedness. Conclusions that can be drawn from these findings are: (1) species level handedness evolved after the divergence of the Pan and Homo lineages; (2) inconsistent preferences may represent precursors to human handedness, and (3) Pan may have language abilities but these cannot be measured using handedness.

  4. STEREO Sees Comet Pan-STARRS

    NASA Video Gallery

    In early March 2013, Comet PanSTARRS became visible to the naked eye in the night sky in the Northern Hemisphere, appearing with a similar shape and brightness as a star, albeit with a trailing tai...

  5. Structural basis for Pan3 binding to Pan2 and its function in mRNA recruitment and deadenylation

    PubMed Central

    Wolf, Jana; Valkov, Eugene; Allen, Mark D; Meineke, Birthe; Gordiyenko, Yuliya; McLaughlin, Stephen H; Olsen, Tayla M; Robinson, Carol V; Bycroft, Mark; Stewart, Murray; Passmore, Lori A

    2014-01-01

    The conserved eukaryotic Pan2–Pan3 deadenylation complex shortens cytoplasmic mRNA 3′ polyA tails to regulate mRNA stability. Although the exonuclease activity resides in Pan2, efficient deadenylation requires Pan3. The mechanistic role of Pan3 is unclear. Here, we show that Pan3 binds RNA directly both through its pseudokinase/C-terminal domain and via an N-terminal zinc finger that binds polyA RNA specifically. In contrast, isolated Pan2 is unable to bind RNA. Pan3 binds to the region of Pan2 that links its N-terminal WD40 domain to the C-terminal part that contains the exonuclease, with a 2:1 stoichiometry. The crystal structure of the Pan2 linker region bound to a Pan3 homodimer shows how the unusual structural asymmetry of the Pan3 dimer is used to form an extensive high-affinity interaction. This binding allows Pan3 to supply Pan2 with substrate polyA RNA, facilitating efficient mRNA deadenylation by the intact Pan2–Pan3 complex. PMID:24872509

  6. The Pan-STARRS discovery machine

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.

    2014-11-01

    The Pan-STARRS System has proven to be a remarkable machine for discovery. The PS1 Science Mission has drawn to a close, and the second Pan-STARRS survey, optimized for NEO's has begun. PS2 is in the commissioning stages and will eventually support NEO discovery as well. The performance of the PS1 system, sky coverage, cadence, and data quality of the Pan-STARRS1 Surveys will be presented as well as progress in reprocessing of the data taken to date and the plans for the public release of all Pan-STARRS1 data products in the spring of 2015. Science results related to planetary studies and the dust will be presented. The Pan-STARRS1 Surveys (PS1) have been made possible through contributions of the Institute for Astronomy, the University of Hawaii, the Pan-STARRS Project Office, the Max-Planck Society and its participating institutes, the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching, The Johns Hopkins University, Durham University, the University of Edinburgh, Queen's University Belfast, the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated, the National Central University of Taiwan, the Space Telescope Science Institute, the National Aeronautics and Space Administration under Grant No. NNX08AR22G issued through the Planetary Science Division of the NASA Science Mission Directorate, the National Science Foundation under Grant No. AST-1238877, the University of Maryland, and Eotvos Lorand University (ELTE).

  7. Pan-information Location Map

    NASA Astrophysics Data System (ADS)

    Zhu, X. Y.; Guo, W.; Huang, L.; Hu, T.; Gao, W. X.

    2013-11-01

    A huge amount of information, including geographic, environmental, socio-economic, personal and social network information, has been generated from diverse sources. Most of this information exists separately and is disorderly even if some of it is about the same person, feature, phenomenon or event. Users generally need to collect related information from different sources and then utilize them in applications. An automatic mechanism, therefore, for establishing a connection between potentially-related information will profoundly expand the usefulness of this huge body of information. A connection tie is semantic location describing semantically concepts and attributes of locations as well as relationships between locations, since 80% of information contains some kind of geographic reference but not all of geographic reference has explicit geographic coordinates. Semantic location is an orthogonal form of location representation which can be represented as domain ontology or UML format. Semantic location associates various kinds of information about a same object to provide timely information services according to users' demands, habits, preferences and applications. Based on this idea, a Pan-Information Location Map (PILM) is proposed as a new-style 4D map to associates semantic location-based information dynamically to organize and consolidate the locality and characteristics of corresponding features and events, and delivers on-demand information with a User-Adaptive Smart Display (UASD).

  8. Interaction of sugar stabilized silver nanoparticles with the T-antigen specific lectin, jacalin from Artocarpus integrifolia.

    PubMed

    Ayaz Ahmed, Khan Behlol; Mohammed, Ansari Sulthan; Veerappan, Anbazhagan

    2015-06-15

    The advances in nanomedicine demonstrate the anticancer properties of silver nanoparticles (AgNPs) and considered as an alternative to the available chemotherapeutic agents. Owing to the preferential interaction of Artocarpus integrifolia lectin (jacalin) with Galβ1-3GalNAcα (a chemically well-defined tumor associated antigen), a study was undertaken to understand the interaction mechanism of AgNPs with jacalin in presence of specific sugar, galactose. Fluorescence spectroscopic analysis revealed that the AgNPs binding significantly quenched the intrinsic fluorescence of jacalin through a static quenching mechanism, and a non-radiative energy transfer occurred within the molecules. Association constants obtained from the interaction of different sugar-stabilized AgNPs with jacalin are in the order of 10(4)M(-1), this is in the same range as those obtained for the interaction of lectin with carbohydrate and hydrophobic ligand. Each subunit of the tetrameric jacalin binds one AgNPs, and the stoichiometry was unaffected by the presence of the specific sugar, galactose. Hemagglutination assay shows that sugar stabilized AgNPs interacts to jacalin at a site that is different from the saccharide-binding site. Analysis of the FTIR spectra of jacalin indicates that the binding of AgNPs does not alter the secondary structure of jacalin. More importantly, AgNPs exists in nano form even after interacting with the lectin. These results suggest that the development of lectin-AgNPs conjugate would be possible for diagnosis and treatment of cancer.

  9. Evaluation of antioxidant, total phenol and flavonoid content and antimicrobial activities of Artocarpus altilis (breadfruit) of underutilized tropical fruit extracts.

    PubMed

    Jalal, Tara Kamal; Ahmed, Idris Adewale; Mikail, Maryam; Momand, Lailuma; Draman, Samsul; Isa, Muhammad Lokman Md; Abdull Rasad, Mohammad Syaiful Bahari; Nor Omar, Muhammad; Ibrahim, Muhammad; Abdul Wahab, Ridhwan

    2015-04-01

    Artocarpus altilis (breadfruit) pulp, peel and whole fruit were extracted with various solvents such as hexane, dichloromethane (DCM) and methanol. The antioxidant activity of these extracts were examined using the stable 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging test. IC50 was 55 ± 5.89 μg/ml for the pulp part of methanol extract. In the β-carotene bleaching assay, the antioxidant activity was 90.02 ± 1.51 % for the positive control (Trolox) and 88.34 ± 1.31 % for the pulp part of the fruit methanol extract. The total phenolic content of the crude extracts was determined using the Folin-Ciocalteu procedure; methanol pulp part demonstrated the highest phenol content value of 781 ± 52.97 mg GAE/g of dry sample. While the total flavonoid content was determined using the aluminium chloride colorimetric assay, the highest value of 6213.33 ± 142.22 mg QE/g was indicated by pulp part of the fruit methanol extract. The antimicrobial activity of the crude extracts was tested using disc diffusion method against pathogenic microorganisms: Staphylococcus aureus, Staphylococcus epidermidis, Bacillus cereus, Salmonella typhimurium, Escherichia coli, Klebsiella pneumonia and Candida albicans. Methanol extract of pulp part was recorded to have the highest zone of inhibition against Gram-positive and Gram-negative bacteria. The minimum inhibitory concentration (MIC) and MBC/minimal fungicidal concentration (MFC) for the extracts were also determined using the microdilution method ranging from 4000 to 63 μg/ml against pathogenic microbes. The MBC/MFC values varied from 250 to 4000 μg/ml. A correlation between antioxidant activity assays, antimicrobial activity and phenolic content was established. The results shows that the various parts of A. altilis fruit extracts promising antioxidant activities have potential bioactivities due to high content of phenolic compounds.

  10. Pyranocycloartobiloxanthone A, a novel gastroprotective compound from Artocarpus obtusus Jarret, against ethanol-induced acute gastric ulcer in vivo.

    PubMed

    Sidahmed, Heyam M A; Hashim, Najihah Mohd; Amir, Junaidah; Abdulla, Mahmood Ameen; Hadi, A Hamid A; Abdelwahab, Siddig Ibrahim; Taha, Manal Mohamed Elhassan; Hassandarvish, Pouya; Teh, Xinsheng; Loke, Mun Fai; Vadivelu, Jamuna; Rahmani, Mawardi; Mohan, Syam

    2013-07-15

    Pyranocycloartobiloxanthone A (PA), a xanthone derived from the Artocarpus obtusus Jarret, belongs to the Moraceae family which is native to the tropical forest of Malaysia. In this study, the efficacy of PA as a gastroprotective compound was examined against ethanol-induced ulcer model in rats. The rats were pretreated with PA and subsequently exposed to acute gastric lesions induced by absolute ethanol. The ulcer index, gastric juice acidity, mucus content, histological analysis, glutathione (GSH) levels, malondialdehyde level (MDA), nitric oxide (NO) and non-protein sulfhydryl group (NP-SH) contents were evaluated in vivo. The activities of PA as anti-Helicobacter pylori, cyclooxygenase-2 (COX-2) inhibitor and free radical scavenger were also investigated in vitro. The results showed that the oral administration of PA protects gastric mucosa from ethanol-induced gastric lesions. PA pretreatment significantly (p<0.05) restored the depleted GSH, NP-SH and NO levels in the gastric homogenate. Moreover, PA significantly (p<0.05) reduced the elevated MDA level due to ethanol administration. The gastroprotective effect of PA was associated with an over expression of HSP70 and suppression of Bax proteins in the ulcerated tissue. In addition, PA exhibited a potent FRAP value and significant COX-2 inhibition. It also showed a significant minimum inhibitory concentration (MIC) against H. pylori bacterium. The efficacy of PA was accomplished safely without the presence of any toxicological parameters. The results of the present study indicate that the gastroprotective effect of PA might contribute to the antioxidant and anti-inflammatory properties as well as the anti-apoptotic mechanism and antibacterial action against Helicobacter pylori.

  11. Interaction of sugar stabilized silver nanoparticles with the T-antigen specific lectin, jacalin from Artocarpus integrifolia

    NASA Astrophysics Data System (ADS)

    Ayaz Ahmed, Khan Behlol; Mohammed, Ansari Sulthan; Veerappan, Anbazhagan

    2015-06-01

    The advances in nanomedicine demonstrate the anticancer properties of silver nanoparticles (AgNPs) and considered as an alternative to the available chemotherapeutic agents. Owing to the preferential interaction of Artocarpus integrifolia lectin (jacalin) with Galβ1-3GalNAcα (a chemically well-defined tumor associated antigen), a study was undertaken to understand the interaction mechanism of AgNPs with jacalin in presence of specific sugar, galactose. Fluorescence spectroscopic analysis revealed that the AgNPs binding significantly quenched the intrinsic fluorescence of jacalin through a static quenching mechanism, and a non-radiative energy transfer occurred within the molecules. Association constants obtained from the interaction of different sugar-stabilized AgNPs with jacalin are in the order of 104 M-1, this is in the same range as those obtained for the interaction of lectin with carbohydrate and hydrophobic ligand. Each subunit of the tetrameric jacalin binds one AgNPs, and the stoichiometry was unaffected by the presence of the specific sugar, galactose. Hemagglutination assay shows that sugar stabilized AgNPs interacts to jacalin at a site that is different from the saccharide-binding site. Analysis of the FTIR spectra of jacalin indicates that the binding of AgNPs does not alter the secondary structure of jacalin. More importantly, AgNPs exists in nano form even after interacting with the lectin. These results suggest that the development of lectin-AgNPs conjugate would be possible for diagnosis and treatment of cancer.

  12. Effect of the hot water extract of Artocarpus camansi leaves on 2,4,6-trinitrochlorobenzene (TNCB)-induced contact hypersensitivity in mice.

    PubMed

    Salonga, Reginald Bayani; Hisaka, Shinsuke; Nose, Mitsuhiko

    2014-01-01

    Medicinal plants with reported anti-inflammatory activity could have the potential use as anti-allergens and inhibitors of allergic contact dermatitis reactions produced by allergens and chemicals. Some species from the genus Artocarpus were reported to have anti-inflammatory activity. In the Philippines one local source is Artocarpus camansi BLANCO (Moraceae), which is utilized as an ingredient of their cuisine, and decoction of leaves is used for diabetes and baths of people with rheumatism. The objective of this study was to evaluate the effect of the hot water extract of A. camansi leaves on contact hypersensitivity (CHS) in mice. Contact hypersensitivity was induced using 2,4,6-trinitrochlorobenzene (TNCB). The results showed that the A. camansi hot water extract exhibited significant activity against the swelling produced during 24 h and 48 h post-challenge. The same responses were observed from the mice that received the kamansi ethanol-precipitate (KEP) and kamansi ethanol precipitate water-soluble (KEPWS) fractions. Since the high molecular mass fraction showed the significant activity, we therefore speculate that the compound responsible might be a polysaccharide and/or glycoprotein. In conclusion, our results suggest that the hot water extract of A. camansi leaves might be an effective natural product to treat allergic contact dermatitis. However, further investigations are required to understand the mechanisms involved.

  13. A novel lectin from Artocarpus lingnanensis induces proliferation and Th1/Th2 cytokine secretion through CD45 signaling pathway in human T lymphocytes.

    PubMed

    Cui, Bo; Li, Lu; Zeng, Qiyan; Lin, Faquan; Yin, Lijun; Liao, Liejun; Huang, Min; Wang, Jingping

    2017-04-01

    Lectins are carbohydrate-binding proteins and have been used for purification and characterization of glycoproteins. In this study, a novel 58.9-kDa tetrameric lectin from Artocarpus lingnanensis seeds was purified, characterized, and its mitogenic potential was evaluated. The hemagglutination inhibition assay indicated that Artocarpus lingnanensis lectin (ALL) showed specificity toward galactose. ALL was effectively purified in a single-step using affinity chromatography on a galactose-Sepharose column. ALL showed pH optima between 5.0 and 9.0, and optimal temperature between 20 and 40 °C. ALL triggered proliferation and activation of human T lymphocytes (e.g., CD4(+) T lymphocytes). Flow cytometry and laser scanning confocal microscopy revealed binding of ALL to T cells and colocalized with CD45. Affinity chromatography and Western blot suggested that CD45 isolated from human T cell membrane fraction may be the major receptor of ALL. CD45 blocking antibody attenuated the binding and proliferation of T cells induced by ALL. CD45-PTPase inhibitor dephostatin reduced ALL-induced T cells proliferation and expression of CD25 and pZAP-70. Furthermore, secretion of ALL-induced Th1/Th2 cytokines was blocked with dephostatin. Also, dephostatin inhibited phosphorylation of ALL-mediated activation of ERK and p38MAPK. This study demonstrates the involvement of CD45-mediated signaling in ALL-induced T lymphocyte proliferation and Th1/Th2 cytokine secretion through activation of p38 and ERK.

  14. Divergent roles for maize PAN1 and PAN2 receptor-like proteins in cytokinesis and cell morphogenesis.

    PubMed

    Sutimantanapi, Dena; Pater, Dianne; Smith, Laurie G

    2014-04-01

    Pangloss1 (PAN1) and PAN2 are leucine-rich repeat receptor-like proteins that function cooperatively to polarize the divisions of subsidiary mother cells (SMCs) during stomatal development in maize (Zea mays). PANs colocalize in SMCs, and both PAN1 and PAN2 promote polarization of the actin cytoskeleton and nuclei in these cells. Here, we show that PAN1 and PAN2 have additional functions that are unequal or divergent. PAN1, but not PAN2, is localized to cell plates in all classes of dividing cells examined. pan1 mutants exhibited no defects in cell plate formation or in the recruitment or removal of a variety of cell plate components; thus, they did not demonstrate a function for PAN1 in cytokinesis. PAN2, in turn, plays a greater role than PAN1 in directing patterns of postmitotic cell expansion that determine the shapes of mature stomatal subsidiary cells and interstomatal cells. Localization studies indicate that PAN2 impacts subsidiary cell shape indirectly by stimulating localized cortical actin accumulation and polarized growth in interstomatal cells. Localization of PAN1, Rho of Plants2, and PIN1a suggests that PAN2-dependent cell shape changes do not involve any of these proteins, indicating that PAN2 function is linked to actin polymerization by a different mechanism in interstomatal cells compared with SMCs. Together, these results demonstrate that PAN1 and PAN2 are not dedicated to SMC polarization but instead play broader roles in plant development. We speculate that PANs may function in all contexts to regulate polarized membrane trafficking either directly or indirectly via their influence on actin polymerization.

  15. Lunar PanCam: Adapting ExoMars PanCam for the ESA Lunar Lander

    NASA Astrophysics Data System (ADS)

    Coates, A. J.; Griffiths, A. D.; Leff, C. E.; Schmitz, N.; Barnes, D. P.; Josset, J.-L.; Hancock, B. K.; Cousins, C. R.; Jaumann, R.; Crawford, I. A.; Paar, G.; Bauer, A.; the PanCam Team

    2012-12-01

    A scientific camera system would provide valuable geological context from the surface for lunar lander missions. Here, we describe the PanCam instrument from the ESA ExoMars rover and its possible adaptation for the proposed ESA lunar lander. The scientific objectives of the ESA ExoMars rover are designed to answer several key questions in the search for life on Mars. The ExoMars PanCam instrument will set the geological and morphological context for that mission. We describe the PanCam scientific objectives in geology, and atmospheric science, and 3D vision objectives. We also describe the design of PanCam, which includes a stereo pair of Wide Angle Cameras (WACs), each of which has a filter wheel, and a High Resolution Camera for close up investigations. The cameras are housed in an optical bench (OB) and electrical interface is provided via the PanCam Interface Unit (PIU). Additional hardware items include a PanCam Calibration Target (PCT). We also briefly discuss some PanCam testing during field trials. In addition, we examine how such a 'Lunar PanCam' could be adapted for use on the Lunar surface on the proposed ESA lunar lander.

  16. 78 FR 23101 - Pan American Day and Pan American Week, 2013

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-04-17

    ... trade with our partners abroad and open new markets for American products. We have worked together to..., and Peru, we are making progress toward a Trans-Pacific Partnership. And inter-American trade is... April 17, 2013 Part IV The President Proclamation 8957--Pan American Day and Pan American Week, 2013...

  17. A mathematical model of pan evaporation under steady state conditions

    NASA Astrophysics Data System (ADS)

    Lim, Wee Ho; Roderick, Michael L.; Farquhar, Graham D.

    2016-09-01

    In the context of changing climate, global pan evaporation records have shown a spatially-averaged trend of ∼ -2 to ∼ -3 mm a-2 over the past 30-50 years. This global phenomenon has motivated the development of the "PenPan" model (Rotstayn et al., 2006). However, the original PenPan model has yet to receive an independent experimental evaluation. Hence, we constructed an instrumented US Class A pan at Canberra Airport (Australia) and monitored it over a three-year period (2007-2010) to uncover the physics of pan evaporation under non-steady state conditions. The experimental investigations of pan evaporation enabled theoretical formulation and parameterisation of the aerodynamic function considering the wind, properties of air and (with or without) the bird guard effect. The energy balance investigation allowed for detailed formulation of the short- and long-wave radiation associated with the albedos and the emissivities of the pan water surface and the pan wall. Here, we synthesise and generalise those earlier works to develop a new model called the "PenPan-V2" model for application under steady state conditions (i.e., uses a monthly time step). Two versions (PenPan-V2C and PenPan-V2S) are tested using pan evaporation data available across the Australian continent. Both versions outperformed the original PenPan model with better representation of both the evaporation rate and the underlying physics of a US Class A pan. The results show the improved solar geometry related calculations (e.g., albedo, area) for the pan system led to a clear improvement in representing the seasonal cycle of pan evaporation. For general applications, the PenPan-V2S is simpler and suited for applications including an evaluation of long-term trends in pan evaporation.

  18. The Pan-STARRS1 Surveys

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.

    2014-01-01

    Pan-STARRS1 is approaching the completion of the PS1 Science Mission. Operations of the PS1 System include the Observatory, Telescope, 1.4 Gigapixel Camera, Image Processing Pipeline , PSPS relational database and reduced science product software servers. The Pan-STARRS1 Surveys include: (1) A 3pi Steradian Survey, (2) A Medium Deep survey of 10 PS1 footprints spaced around the sky; (3) A solar system survey optimized for Near Earth Objects, (4) a Stellar Transit Survey; and (5) a Deep Survey of M31. The PS1 3pi Survey has now covered the sky north of dec=-30 with more than 12 visits in five bands: g,r,i,z and y or over ~60 epochs per 0.25 arcsec resolution element on the sky. The performance of the PS1 system, sky coverage, cadence, and data quality of the Pan-STARRS1 Surveys will be presented as well as progress in reprocessing of the data taken to date and the plans for the public release of all Pan-STARRS1 data products in the spring of 2015. The Pan-STARRS1 Surveys (PS1) have been made possible through contributions of the Institute for Astronomy, the University of Hawaii, the Pan-STARRS Project Office, the Max-Planck Society and its participating institutes, the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching, The Johns Hopkins University, Durham University, the University of Edinburgh, Queen's University Belfast, the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated, the National Central University of Taiwan, the Space Telescope Science Institute, the National Aeronautics and Space Administration under Grant No. NNX08AR22G issued through the Planetary Science Division of the NASA Science Mission Directorate, the National Science Foundation under Grant No. AST-1238877, the University of Maryland, and Eotvos Lorand University (ELTE).

  19. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 3 2011-01-01 2011-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  20. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  1. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 3 2014-01-01 2014-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  2. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 3 2013-01-01 2013-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  3. 7 CFR 58.913 - Evaporators and vacuum pans.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 3 2012-01-01 2012-01-01 false Evaporators and vacuum pans. 58.913 Section 58.913....913 Evaporators and vacuum pans. All equipment used in the removal of moisture from milk or milk... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans....

  4. Student-Centered Designs of Pan-African Literature Courses

    ERIC Educational Resources Information Center

    M'Baye, Babacar

    2010-01-01

    A student-centered teaching methodology is an essential ingredient of a successful Pan-African literary course. In this article, the author defines Pan-Africanism and how to go about designing a Pan-African literature course. The author combines reading assignments with journals, film presentations, and lectures in a productive learning…

  5. Rotatable prism for pan and tilt

    NASA Technical Reports Server (NTRS)

    Ball, W. B.

    1980-01-01

    Compact, inexpensive, motor-driven prisms change field of view of TV camera. Camera and prism rotate about lens axis to produce pan effect. Rotating prism around axis parallel to lens produces tilt. Size of drive unit and required clearance are little more than size of camera.

  6. THE Pan-STARRS1 PHOTOMETRIC SYSTEM

    SciTech Connect

    Tonry, J. L.; Burgett, W. S.; Chambers, K. C.; Hodapp, K. W.; Kaiser, N.; Kudritzki, R.-P.; Magnier, E. A.; Morgan, J. S.; Wainscoat, R. J.; Stubbs, C. W.; Shivvers, I. S.; Lykke, K. R.; Doherty, P.; Price, P. A.

    2012-05-10

    The Pan-STARRS1 survey is collecting multi-epoch, multi-color observations of the sky north of declination -30 Degree-Sign to unprecedented depths. These data are being photometrically and astrometrically calibrated and will serve as a reference for many other purposes. In this paper, we present our determination of the Pan-STARRS1 photometric system: g{sub P1}, r{sub P1}, i{sub P1}, z{sub P1}, y{sub P1}, and w{sub P1}. The Pan-STARRS1 photometric system is fundamentally based on the Hubble Space Telescope Calspec spectrophotometric observations, which in turn are fundamentally based on models of white dwarf atmospheres. We define the Pan-STARRS1 magnitude system and describe in detail our measurement of the system passbands, including both the instrumental sensitivity and atmospheric transmission functions. By-products, including transformations to other photometric systems, Galactic extinction, and stellar locus, are also provided. We close with a discussion of remaining systematic errors.

  7. Gerosuppression by pan-mTOR inhibitors

    PubMed Central

    Leontieva, Olga V.; Blagosklonny, Mikhail V.

    2016-01-01

    Rapamycin slows organismal aging and delays age-related diseases, extending lifespan in numerous species. In cells, rapamycin and other rapalogs such as everolimus suppress geroconversion from quiescence to senescence. Rapamycin inhibits some, but not all, activities of mTOR. Recently we and others demonstrated that pan-mTOR inhibitors, known also as dual mTORC1/C2 inhibitors, suppress senescent phenotype. As a continuation of these studies, here we investigated in detail a panel of pan-mTOR inhibitors, to determine their optimal gerosuppressive concentrations. During geroconversion, cells become hypertrophic and flat, accumulate lysosomes (SA-beta-Gal staining) and lipids (Oil Red staining) and lose their re-proliferative potential (RPP). We determined optimal gerosuppressive concentrations: Torin1 (30 nM), Torin 2 (30 nM), AZD8055 (100 nM), PP242 (300 nM), both KU-006379 and GSK1059615 (1000 nM). These agents decreased senescence-associated hypertrophy with IC50s: 20, 18, 15, 200 and 400 nM, respectively. Preservation of RPP by pan-mTOR inhibitors was associated with inhibition of the pS6K/pS6 axis. Inhibition of rapamycin-insensitive functions of mTOR further contributed to anti-hypertrophic and cytostatic effects. Torin 1 and PP242 were more “rapamycin-like” than Torin 2 and AZD8055. Pan-mTOR inhibitors were superior to rapamycin in suppressing hypertrophy, senescent morphology, Oil Red O staining and in increasing so-called “chronological life span (CLS)”. We suggest that, at doses lower than anti-cancer concentrations, pan-mTOR inhibitors can be developed as anti-aging drugs. PMID:28077803

  8. 14. RW Meyer Sugar Mill: 18761889. Sorghum Pan. Manufactured by ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    14. RW Meyer Sugar Mill: 1876-1889. Sorghum Pan. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: In the sorghum pan, heat was applied to the cane juice to clarify it, evaporate its water content, and concentrate the sugar crystals. The pan was set on a slope so that the juice would move through the compartments by gravity. The hand-lever sluice valves in the partition walls between the compartments permitted the sugar boiler to regulate the movement of batches of cane juice flowing through the pan. The metal fins projecting from the bottom of the pan imparted a circuitous route to the juice as it flowed through the pan--this made it flow over a much greater heated surface. The fins also supplemented the pan's heating surface by ... - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  9. BRDF of Salt Pan Regolith Samples

    NASA Technical Reports Server (NTRS)

    Georgiev, Georgi T.; Gatebe, Charles K.; Butler, James J.; King, Michael D.

    2008-01-01

    Laboratory Bi-directional Reflectance Distribution Function (BRDF) measurements of salt pan regolith samples are presented in this study in an effort to understand the role of spatial and spectral variability of the natural biome. The samples were obtained from Etosha Pan, Namibia (19.20 deg S, 15.93 deg E, alt. 1100 m). It is shown how the BRDF depends on the measurement geometry - incident and scatter angles and on the sample particle sizes. As a demonstration of the application of the results, airborne BRDF measurements acquires with NASA's Cloud Absorption Radiometer (CAR) over the same general site where the regolith samples were collected are compared with the laboratory results. Good agreement between laboratory measured and field measured BRDF is reported.

  10. The Imager for Mars Pathfinder Insurance Pan

    NASA Technical Reports Server (NTRS)

    Herkenhoff, K. E.; Johnson, J. R.; Weller, L. A.

    2003-01-01

    The Imager for Mars Pathfinder (IMP) obtained a full panorama of the Sagan Memorial Station landing site on Sol 2, before the IMP mast was deployed. The images in this panorama were taken in 4 filters (including stereo) and losslessly compressed to provide a high-quality multispectral survey of the landing site even if the IMP mast did not successfully deploy; this data set was therefore called the Insurance Pan. It was completed late in the afternoon of Sol 2, just before the IMP mast was (successfully) deployed. The data were stored in memory and returned to Earth after it became clear that downlink rates were higher than expected. The Insurance Pan horizontal (azimuth) coverage is nearly complete, with gaps caused by pointing errors and data packet losses. Stereo data were acquired in the blue (445 nm) filter, as well as right-eye green (531 nm), orange (600 nm), and near-infrared (752 nm) data.

  11. PanDA for COMPASS at JINR

    NASA Astrophysics Data System (ADS)

    Petrosyan, A. Sh.

    2016-09-01

    PanDA (Production and Distributed Analysis System) is a workload management system, widely used for data processing at experiments on Large Hadron Collider and others. COMPASS is a high-energy physics experiment at the Super Proton Synchrotron. Data processing for COMPASS runs locally at CERN, on lxbatch, the data itself stored in CASTOR. In 2014 an idea to start running COMPASS production through PanDA arose. Such transformation in experiment's data processing will allow COMPASS community to use not only CERN resources, but also Grid resources worldwide. During the spring and summer of 2015 installation, validation and migration work is being performed at JINR. Details and results of this process are presented in this paper.

  12. Pan abode naturally passive solar homes

    SciTech Connect

    Steel, G.B.

    1981-03-01

    Currently Pan Abode markets 30 stock models of solid timber homes. In these homes the interior and exterior walls are of solid timber construction. Wall timbers, made from Western Red Cedar, are precut at the factory in Renton, Washington and then shipped to the site for assembly. Once at the site, the wall timbers are stacked according to the approved plans with timbers laid up throughout the house one course at a time. Ceilings in the Pan Abode homes are exposed beam with 2'' x 6'' sheathing. The large amount of exposed wood in the Pan Abode homes naturally provides the thermal mass necessary for a high performance passive solar home. The best selling stock model for Pan Abode is the Standard Cavalier. Because this home is the best selling model, it is selected as the base case for the development of a passive solar product line. The design objective is to modify the Standard Cavalier making use of its natural thermal mass to provide significantly improved thermal performance while minimizing any increases in the first costs attributed to passive solar design. Two generic passive solar systems are considered in the design process. The first system is ''direct gain.'' In this system the south windows are used to collect winter sun and the natural thermal mass inside the home is used to moderate the interior temperatures, storing and releasing solar heat, as necessary. The second system provides for a room addition to the basic house of an Energy Wing Solarium. The Energy Wing provides improved thermal performance to the Cavalier and provides a sun room, as well. In this system south facing windows on the Energy Wing collect sunlight in the winter. The design options, thermal performance, market and cost are discussed.

  13. A model of the biogeographical journey from Proto-pan to Pan paniscus.

    PubMed

    Myers Thompson, Jo A

    2003-04-01

    Pan paniscus is unique in the group of African apes because of its range south of the Congo River. Examination of the bio-geographical journey of the genus Pan to the species P. paniscus is important when discussing the evolution of African apes. This paper is a review of the paleo-geographic events, the zoogeography, and faunal sorting which influenced P. paniscus divergence from the Proto-pan ancestor within the recent Miocene through Pliocene Epochs, approximately 10-2 MYA. Finally, by elucidating modern day evidence of food plant forms in the southern periphery exploited by P. paniscus in the forest/savanna mosaic habitat, we are able to conclude with those extrinsic events that most influenced the occurrence and distribution of P. paniscus.

  14. Pan Eurasian Experiment (PEEX): a new research initiative focused on the Northern Pan-Eurasian Region

    NASA Astrophysics Data System (ADS)

    Petäjä, Tuukka; Lappalainen, Hanna; Zaytseva, Nina; Shvidenko, Anatoli; Kujansuu, Joni; Kerminen, Veli-Matti; Viisanen, Yrjö; Kotlyakov, Vladimir; Kasimov, Nikolai; Bondur, Valery; Matvienko, Gennadi; Zilitinkevich, Sergej; Kulmala, Markku

    2014-05-01

    The increasing human activities are changing the environment and the humanity is we are pushing the safe boundaries of the globe. It is of utmost importance to gauge with a comprehensive research program on the current status of the environment, particularly in the most vulnerable locations. Pan-Eurasian Experiment (PEEX) is a new multidisciplinary research approach aiming at resolving the major uncertainties in the Earth system science and global sustainability questions in the Arctic and boreal Pan-Eurasian regions. The PEEX program aims (i) to understand the Earth system and the influence of environmental and societal changes in pristine and industrialized Pan-Eurasian environments, (ii) to establish and sustain long-term, continuous and comprehensive ground-based airborne and seaborne research infrastructures, and to utilize satellite data and multi-scale model frameworks, (iii) to contribute to regional climate scenarios in the northern Pan-Eurasia and determine the relevant factors and interactions influencing human and societal wellbeing (iv) to promote the dissemination of PEEX scientific results and strategies in scientific and stake-holder communities and policy making, (v) to educate the next generation of multidisciplinary global change experts and scientists, and (vi) to increase the public awareness of climate change impacts in the Pan-Eurasian region. The development of PEEX research infrastructure will be one of the first activities of PEEX. PEEX will find synergies with the major European land-atmosphere observation infrastructures such as ICOS a research infrastructure to decipher the greenhouse gas balance of Europe and adjacent regions, ACTRIS (Aerosols, Clouds, and Trace gases Research InfraStructure Network-project), and ANAEE (The experimentation in terrestrial ecosystem research) networks and with the flag ship stations like the SMEARs (Station for Measuring Ecosystem-Atmosphere Relations) when design, re-organizing and networking existing

  15. Piagetian liquid conservation in the great apes (Pan paniscus, Pan troglodytes, and Pongo pygmaeus).

    PubMed

    Suda, Chikako; Call, Josep

    2004-09-01

    An understanding of Piagetian liquid conservation was investigated in 4 bonobos (Pan paniscus), 5 chimpanzees (Pan troglodytes), and 5 orangutans (Pongo pygmaeus). The apes were tested in the ability to track the larger of 2 quantities of juice that had undergone various kinds of transformations. The accuracy of the apes' judgment depended on the shape or number of containers into which the larger quantity was transferred. The apes made their choice mainly on the basis of visual estimation but showed modest success when the quantities were occluded. The results suggest that the apes rely to a greater extent on visual information, although they might have some appreciation of the constancy of liquid quantities.

  16. 75 FR 47262 - Federal Consistency Appeal by Pan American Grain Co.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-08-05

    ... National Oceanic and Atmospheric Administration Federal Consistency Appeal by Pan American Grain Co. AGENCY... administrative appeal filed by Pan American Grain Co. (Pan American). DATES: The decision record for the Pan... gcos.inquiries@noaa.gov . SUPPLEMENTARY INFORMATION: On January 27, 2010, Pan American Grain Co....

  17. 22. RW Meyer Sugar Mill: 18761889. Sorghum Pan. Manufactured by ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    22. RW Meyer Sugar Mill: 1876-1889. Sorghum Pan. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: Historical view, 1934, T.T. Waterman Collection, Hawaiian Sugar Planters' Association, Oahu, Hawaii. View looking toward east end of sorghum pan and interior of east end of the boiling house. Walls and final compartment of the sorghum pan are still intact. - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  18. Detection and Behavior of Pan Wakes in Saturn's A Ring

    NASA Technical Reports Server (NTRS)

    Horn, L. J.; Showalter, M. R.; Russell, C. T.

    1996-01-01

    Six previously unseen Pan wakes are found interior and exterior to the Encke gap in Saturn's A ring, one in the Voyager 2 photopolarimeter (PPS) stellar occultation data and five in the Voyager 1 radio science (RSS) Earth occultation data. Pan orbits at the center of the Encke gap and maintains it...The detection of Pan wakes at longitudes greater than 360(deg) demonstrates that wakes persist for much longer than originally hypothesized and may interact with one another.

  19. Ozone export from East Asia: The role of PAN

    NASA Astrophysics Data System (ADS)

    Jiang, Zhe; Worden, John R.; Payne, Vivienne H.; Zhu, Liye; Fischer, Emily; Walker, Thomas; Jones, Dylan B. A.

    2016-06-01

    Peroxyacetyl nitrate (PAN) is an important ozone (O3) precursor. The lifetime of PAN is approximately 1 month in the free troposphere, and this allows O3 production to occur in pollution plumes at intercontinental distances from its source. In this study we use the Goddard Earth Observing System (GEOS)-Chem global chemical transport model, new satellite measurements of PAN from the Aura Tropospheric Emission Spectrometer (TES), and data from the Arctic Research of the Composition of the Troposphere from Aircraft and Satellites (ARCTAS) field campaign over North America, to study the role of natural and anthropogenic Asian emissions on free tropospheric (900-400 hPa) PAN distributions and subsequent O3 production. Using the ARCTAS data with GEOS-Chem, we show that while GEOS-Chem is unbiased with respect to the aircraft data, TES version 7 PAN data are biased high for regions with surface temperatures colder than 285 K. However, GEOS-Chem and TES measurements provide a consistent representation (within 15% difference) of PAN abundance over East Asia. Because of the good agreement between model and observations, we use the GEOS-Chem model to evaluate the sources of PAN precursors and the effect of free tropospheric PAN on the export of O3 from Asia to North America. The GEOS-Chem model results show that the largest contributors to free tropospheric PAN over Asia and the northern Pacific are anthropogenic and soil NOx emissions. Biomass burning emissions have important contributions to free tropospheric PAN over northern Pacific (25% in April), while the contribution from lightning over northern Pacific is significant in July (40%). Strong springtime transport in April results in more export of free tropospheric PAN and O3 from East Asian emissions. This free tropospheric PAN contributes about 35% to the abundance of free tropospheric O3 over western North America in spring and 25% in summer.

  20. 75 FR 19181 - Pan American Day and Pan American Week, 2010

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-04-14

    ... Pan American Week, 2010 By the President of the United States of America A Proclamation More than 200 years of history and significant current events have reinforced the strong bonds of friendship and common purpose among the nations and people of the Americas. The year 2010 marks the 80th anniversary...

  1. Resolving AGN with PanSTARRS transients

    NASA Astrophysics Data System (ADS)

    Lawrence, Andy

    2012-10-01

    With PanSTARRS we have discovered a new class of slow, blue nuclear transients which we believe to be rare examples of background AGN microlensed by stars in foreground galaxies, amplified by a factor of 10--100. The background AGN should be somewhat resolved by the foreground lens, providing a unique new diagnostic of AGN size and structure - the UV, optical, IR, BLR, and X-ray regions should have differing evolutions during the event. This proposal is a first step towards understanding the structure of the X-ray source : testing the microlensing hypothesis, characterising the SED, and establishing the first two epochs in an expected gradual decline.

  2. Transient Detections from Pan-STARRS

    NASA Astrophysics Data System (ADS)

    Rodney, Steven A.

    2009-01-01

    The first Pan-STARRS telescope, PS1, is now collecting survey data on a nightly basis, for the first time producing new transient detections. One of the primary branches of the PS1 science strategy is the Medium Deep survey, which will detect thousands of supernovae and other explosive transients. This extraordinary yield from a single survey will allow us to put new constraints on the nature of Dark Energy and to improve our understanding of the progenitor systems that produce Type Ia Supernovae. We present early detections from the Fall 2008 PS1 campaign.

  3. Superficial Velocity Effects on HZ-PAN and AgZ-PAN for Kr/Xe Capture

    SciTech Connect

    Welty, Amy Keil; Garn, Troy Gerry; Greenhalgh, Mitchell Randy

    2016-04-01

    Nearly all previous testing of HZ-PAN and AgZ-PAN was conducted at the same flow rate in order to maintain consistency among tests. This testing was sufficient for sorbent capacity determinations, but did not ensure that sorbents were capable of functioning under a range of flow regimes. Tests were conducted on both HZ-PAN and AgZ-PAN at superficial velocities between 20 and 700 cm/min. For HZ-PAN, Kr capacity increased from 60 mmol/kg to 110 mmol/kg as superficial velocity increased from 21 to 679 cm/min. Results for AgZ-PAN were similar, with capacity ranging from 72 to 124 mmol/kg over the same range of superficial. These results are promising for scaling up to process flows, demonstrating flexibility to operate in a broad range of superficial velocities while maintaining sorbent capacity. While preparing for superficial velocity testing it was also discovered that AgZ-PAN Xe capacity, previously observed to diminish over time, could be recovered with increased desorption temperature. Further, a substantial Xe capacity increase was observed. Previous room temperature capacities in the range of 22-25 mmol Xe/kg AgZ-PAN were increased to over 60 mmol Xe/kg AgZ-PAN. While this finding has not yet been fully explored to optimize activation and desorption temperatures, it is encouraging.

  4. Anti-inflammatory effect of the 5,7,4'-trihydroxy-6-geranylflavanone isolated from the fruit of Artocarpus communis in S100B-induced human monocytes.

    PubMed

    Lin, Jer-An; Fang, Song-Chwan; Wu, Chi-Hao; Huang, Shang-Ming; Yen, Gow-Chin

    2011-01-12

    The fruit of Artocarpus communis Moraceae, a traditional starch crop, is a rich source of phytochemicals, such as flavonoids and their derivatives. The aim of this study was to investigate whether 5,7,4'-trihydroxy-6-geranylflavanone (AC-GF), a geranyl flavonoid derivative isolated from the fruits of A. communis, could decrease the activation of inflammatory mediators induced by S100B (ligand of receptor for advanced glycation end products, RAGE) in THP-1 monocytes. According to the results, low levels of AC-GF (≤2.5 μM) showed a great inhibitory effect on gene expression of RAGE and down-regulated both TNF-α and IL-1β secretion and gene expression (p < 0.05). AC-GF also decreased reactive oxygen species (ROS) production in response to S100B (p < 0.05). Additionally, Western blotting revealed that AC-GF could effectively attenuate RAGE-dependent signaling, including expression of protein kinase C (PKC) and p47phox, phosphorylation of extracellular signal-regulated kinase (ERK) and p38 mitogen-activated protein kinase (MAPK), and particularly NF-κB activation (p < 0.05). In conclusion, this is the first report that AC-GF possesses great antioxidant and anti-inflammatory properties in vitro. This finding may contribute to increased implication and utilization of the fruit of A. communis Moraceae in functional foods.

  5. Crystallization and preliminary X-ray diffraction studies of frutalin, an α-D-galactose-specific lectin from Artocarpus incisa seeds.

    PubMed

    Monteiro-Moreira, Ana Cristina de Oliveira; D'Muniz Pereira, Humberto; Vieira Neto, Antonio Eufrasio; Mendes Batista Moreno, Frederico Bruno; Duarte Pinto Lobo, Marina; de Sousa, Felipe Domingos; Moreira, Renato de Azevedo

    2015-10-01

    Frutalin is an α-D-galactose-specific carbohydrate-binding glycoprotein with antitumour properties and is a powerful tool for tumour biomarker discovery. The crystallization and preliminary X-ray diffraction analysis of this lectin, which was isolated from Artocarpus incisa seeds, are reported here. Frutalin was purified and submitted to mass-spectrometric analysis. Diverse masses at approximately 16 kDa were observed in the deconvoluted spectra, which support the presence of isoforms. The best frutalin crystals were grown within a week in 0.1 M citric acid pH 3.5 which contained 25% PEG 3350 as a precipitant at 293 K, and diffracted to a maximum resolution of 1.81 Å. The monoclinic crystals belonged to space group I2, with unit-cell parameters a = 76.17, b = 74.56, c = 118.98 Å, β = 96.56°. A molecular-replacement solution was obtained which indicated the presence of four monomers per asymmetric unit. Crystallographic refinement of the structure is in progress.

  6. Norartocarpetin from a folk medicine Artocarpus communis plays a melanogenesis inhibitor without cytotoxicity in B16F10 cell and skin irritation in mice

    PubMed Central

    2013-01-01

    Background Many natural products used in preventive medicine have also been developed as cosmeceutical ingredients in skin care products, such as Scutellaria baicalensis and Gardenia jasminoides. Norartocarpetin is one of the antioxidant and antityrosinase activity compound in Artocarpus communis; however, the cytotoxicity, skin irritation and antimelanogenesis mechanisms of norartocarpetin have not been investigated yet. Methods In the present study, cell viability in vitro and skin irritation in vivo are used to determine the safety of norartocarpetin. The melanogenesis inhibition of norartocarpetin was determined by cellular melanin content and tyrosinase in B16F10 melanoma cell. Moreover, we examined the related-melanogenesis protein by western blot analysis for elucidating the antimelanogenesis mechanism of norartocarpin. Results The result of the present study demonstrated that norartocarpetin not only present non-cytotoxic in B16F10 and human fibroblast cells but also non-skin irritation in mice. Moreover, our result also first found that norartocarpetin downregulated phospho-cAMP response element-binding (phospho-CREB) and microphthalmia-associated transcription factor (MITF) expression, which in turn decreased both synthesis of tyrosinases (TRP-1 and TRP-2) and cellular melanin content. This process is dependent on norartocarpetin phosphorylation by mitogen-activated protein kinases such as phospho-JNK and phospho-p38, and it results in decreased melanogenesis. Conclusion The present study suggests that norartocarpetin could be used as a whitening agent in medicine and/or cosmetic industry and need further clinical study. PMID:24325567

  7. Effects of Methanol Extract of Breadfruit (Artocarpus altilis) on Atherogenic Indices and Redox Status of Cellular System of Hypercholesterolemic Male Rats.

    PubMed

    Adaramoye, Oluwatosin Adekunle; Akanni, Olubukola Oyebimpe

    2014-01-01

    We investigated the effects of methanol extract of Artocarpus altilis (AA) on atherogenic indices and redox status of cellular system of rats fed with dietary cholesterol while Questran (QUE) served as standard. Biochemical indices such as total cholesterol (TC), triglycerides (TG), low- and high-density lipoproteins-cholesterol (LDL-C and HDL-C), aspartate and alanine aminotransferases (AST and ALT), lactate dehydrogenase (LDH), reduced glutathione, glutathione-s-transferase, glutathione peroxidase (GPx), catalase (CAT), superoxide dismutase (SOD), and lipid peroxidation (LPO) were assessed. Hypercholesterolemic (HC) rats had significantly increased relative weight of liver and heart. Dietary cholesterol caused a significant increase (P < 0.05) in the levels of serum, hepatic, and cardiac TC by 110%, 70%, and 85%, LDL-C by 79%, 82%, and 176%, and TG by 68%, 96%, and 62%, respectively. Treatment with AA significantly reduced the relative weight of the organs and lipid parameters. There were beneficial increases in serum and cardiac HDL-C levels in HC rats treated with AA. In HC rats, serum LDH, ALT, and AST activities and levels of LPO were increased, whereas hepatic and cardiac SOD, CAT, and GPx were reduced. All biochemical and histological alterations were ameliorated upon treatment with AA. Extract of AA had protective effects against dietary cholesterol-induced hypercholesterolemia.

  8. Moracin C, A Phenolic Compound Isolated from Artocarpus heterophyllus, Suppresses Lipopolysaccharide-Activated Inflammatory Responses in Murine Raw264.7 Macrophages.

    PubMed

    Yao, Xue; Wu, Dang; Dong, Ningning; Ouyang, Ping; Pu, Jiaqian; Hu, Qian; Wang, Jingyuan; Lu, Weiqiang; Huang, Jin

    2016-07-25

    Artocarpus heterophyllus, a popular tropical fruit commonly known as the jackfruit tree, is normally planted in subtropical or tropical areas. Since a variety of phytochemicals isolated from A. heterophyllus have been found to possess potently anti-inflammatory, antiviral and antimalarial activities, researchers have devoted much interest to its potential pharmaceutical value. However, the exact mechanism underlying its anti-inflammatory activity is not well characterized. In this study, seven natural products isolated from A. heterophyllus, including 25-Hydroxycycloart-23-en-3-one (HY), Artocarpin (AR), Dadahol A (DA), Morachalcone A (MA), Artoheterophyllin B (AB), Cycloheterophyllin (CY) and Moracin C (MC) were collected. Lipopolysaccharide (LPS)-stimulated inflammatory response in RAW264.7 macrophages were used in this study. Among these compounds, MC significantly inhibited LPS-activated reactive oxygen species (ROS) and nitric oxide (NO) release without marked cytotoxicity. Furthermore, MC effectively reduced LPS stimulated up-regulation of mRNA and protein expression of inducible nitric oxide synthase (iNOS), cyclooxygenase-2 (COX-2), and serval pro-inflammatory cytokines (interleukin-1β (IL-1β), interleukin-6 (IL-6) and tumor necrosis factor α (TNF-α)). Mechanistic studies revealed that the anti-inflammatory effect of MC was associated with the activation of the mitogen activated protein kinases (MAPKs) (including p38, ERK and JNK) and nuclear factor-κB (NF-κB) pathways, especially reducing the nuclear translocation of NF-κB p65 subunit as revealed by nuclear separation experiment and confocal microscopy.

  9. Extracts of Artocarpus communis decrease α-melanocyte stimulating hormone-induced melanogenesis through activation of ERK and JNK signaling pathways.

    PubMed

    Fu, Yi-Tzu; Lee, Chiang-Wen; Ko, Horng-Huey; Yen, Feng-Lin

    2014-01-01

    Artocarpus communis is an agricultural plant that is also used in folk medicine to prevent skin diseases, including acne and dermatitis. Extracts of A. communis have been used to effectively inhibit melanogenesis; however, the antimelanogenesis mechanism of these extracts has not yet been investigated. The present study utilized a cell-free tyrosinase assay as well as α-melanocyte stimulating hormone- (-MSH-) induced tyrosinase assay conducted in B16F10 cells, performed a cytotoxicity assay, and determined cellular melanin content to examine the effects of a methanolic extract of A. communis (ACM) and various organic partition fractions of A. communis on melanogenesis. In addition, we performed western blot analysis to elucidate the mechanism of their antimelanogenesis effect. Our results indicated that, except for the n-hexane extract, ACM and the various partition extracts at noncytotoxic concentrations effectively decreased melanin content and tyrosinase activity by downregulating microphthalmia-associated transcription factor (MITF) and phosphorylated cAMP response element-binding protein (p-CREB). Moreover, ACM and the partition fractions activated phosphorylation of extracellular signal-regulated kinase (ERK) and c-Jun N-terminal kinase (JNK) to inhibit the synthesis of MITF and finally to decrease melanin production. In conclusion, we suggest that noncytotoxic concentrations of ACM and the various partition fractions may be useful as references for developing skin-lighting agents for use in medicines or cosmetics.

  10. Effects of Methanol Extract of Breadfruit (Artocarpus altilis) on Atherogenic Indices and Redox Status of Cellular System of Hypercholesterolemic Male Rats

    PubMed Central

    Adaramoye, Oluwatosin Adekunle; Akanni, Olubukola Oyebimpe

    2014-01-01

    We investigated the effects of methanol extract of Artocarpus altilis (AA) on atherogenic indices and redox status of cellular system of rats fed with dietary cholesterol while Questran (QUE) served as standard. Biochemical indices such as total cholesterol (TC), triglycerides (TG), low- and high-density lipoproteins-cholesterol (LDL-C and HDL-C), aspartate and alanine aminotransferases (AST and ALT), lactate dehydrogenase (LDH), reduced glutathione, glutathione-s-transferase, glutathione peroxidase (GPx), catalase (CAT), superoxide dismutase (SOD), and lipid peroxidation (LPO) were assessed. Hypercholesterolemic (HC) rats had significantly increased relative weight of liver and heart. Dietary cholesterol caused a significant increase (P < 0.05) in the levels of serum, hepatic, and cardiac TC by 110%, 70%, and 85%, LDL-C by 79%, 82%, and 176%, and TG by 68%, 96%, and 62%, respectively. Treatment with AA significantly reduced the relative weight of the organs and lipid parameters. There were beneficial increases in serum and cardiac HDL-C levels in HC rats treated with AA. In HC rats, serum LDH, ALT, and AST activities and levels of LPO were increased, whereas hepatic and cardiac SOD, CAT, and GPx were reduced. All biochemical and histological alterations were ameliorated upon treatment with AA. Extract of AA had protective effects against dietary cholesterol-induced hypercholesterolemia. PMID:24592277

  11. ArtinM, a D-mannose-binding lectin from Artocarpus integrifolia, plays a potent adjuvant and immunostimulatory role in immunization against Neospora caninum.

    PubMed

    Cardoso, Mariana R D; Mota, Caroline M; Ribeiro, Dâmaso P; Santiago, Fernanda M; Carvalho, Julianne V; Araujo, Ester C B; Silva, Neide M; Mineo, Tiago W P; Roque-Barreira, Maria C; Mineo, José R; Silva, Deise A O

    2011-11-15

    ArtinM and Jacalin (JAC) are lectins from the jackfruit (Artocarpus integrifolia) that have important role in modulation of immune responses to pathogens. Neospora caninum is an Apicomplexa parasite that causes neuromuscular disease in dogs and reproductive disorders in cattle, with economic impact on the livestock industry. Hence, we evaluated the adjuvant effect of ArtinM and JAC in immunization of mice against neosporosis. Six C57BL/6 mouse groups were subcutaneously immunized three times at 2-week intervals with Neospora lysate antigen (NLA) associated with lectins (NLA+ArtinM and NLA+JAC), NLA, ArtinM and JAC alone, and PBS (infection control). Animals were challenged with lethal dose of Nc-1 isolate and evaluated for morbidity, mortality, specific antibody response, cytokine production by spleen cells, brain parasite burden and inflammation. Our results demonstrated that ArtinM was able to increase NLA immunogenicity, inducing the highest levels of specific total IgG and IgG2a/IgG1 ratio, ex vivo Th1 cytokine production, increased survival, the lowest brain parasite burden, along with the highest inflammation scores. In contrast, NLA+JAC immunized group showed intermediate survival, the highest brain parasite burden and the lowest inflammation scores. In conclusion, ArtinM presents stronger immunostimulatory and adjuvant effect than Jacalin in immunization of mice against neosporosis, by inducing a protective Th1-biased pro-inflammatory immune response and higher protection after parasite challenge.

  12. Pan-European catalogue of flood events

    NASA Astrophysics Data System (ADS)

    Parajka, Juraj; Mangini, Walter; Viglione, Alberto; Hundecha, Yeshewatesfa; Ceola, Serena

    2016-04-01

    There have been numerous extreme flood events observed in Europe in the past years. One of the way to improve our understanding about causing flood generation mechanisms is to analyse spatial and temporal variability of a large number of flood events. The aim of this study is to present a pan-European catalogue of flood events developed within the SWITCH-ON EU Project. The flood events are identified from daily discharge observations at 1315 stations listed in Global Runoff Data Centre database. The average length of discharge time-series for selected stations is 54 years. For each event, basin boundary and additional hydrological and weather characteristics are extracted. Hydrological characteristics are extracted from the pan-European HYPE model simulations. Precipitation, together with the corresponding proportions of rainfall and snowfall, snowmelt, and evapotranspiration are computed as total amounts between the event start date and event peak date. Soil moisture, soil moisture deficit, and basin accumulated snow water equivalent are computed for the event start date. Weather characteristics are derived from the weather circulation pattern catalogue developed within COST 733 Project. The results are generated in an open data access and tools framework which allows reproduction and extension of results to other regions. More information about the analysis and project are available at: http://www.water-switch-on.eu/lab.html.

  13. Pan-STARRS Data Release 1

    NASA Astrophysics Data System (ADS)

    Flewelling, Heather

    2017-01-01

    We present an overview of the first and second Pan-STARRS data release (DR1 and DR2), and how to use the Published Science Products Subsystem (PSPS) and the Pan-STARRS Science Interface (PSI) to access the images and the catalogs. The data will be available from the STScI MAST archive. The PSPS is an SQLServer database that can be queried via script or web interface. This database has relative photometry and astrometry and object associations, making it easy to do searches across the entire sky as well as tools to generate lightcurves of individual objects as a function of time. Both releases of data use the 3pi survey, which has 5 filters (g,r,i,z,y), roughly 60 epochs (12 per filter) and covers 3/4 of the sky and everything north of -30 degrees declination. The first release of data (DR1) will contain stack images, mean attribute catalogs and static sky catalogs based off of the stacks. The second release of data (DR2) will contain the time domain data. For the images, this will include single exposures that have been detrended and warped. For the catalogs, this will include catalogs of all exposures as well as forced photometry.

  14. Atmospheric peroxyacetyl nitrate (PAN): a global budget and source attribution

    NASA Astrophysics Data System (ADS)

    Fischer, E. V.; Jacob, D. J.; Yantosca, R. M.; Sulprizio, M. P.; Millet, D. B.; Mao, J.; Paulot, F.; Singh, H. B.; Roiger, A.-E.; Ries, L.; Talbot, R. W.; Dzepina, K.; Pandey Deolal, S.

    2013-10-01

    Peroxyacetyl nitrate (PAN) formed in the atmospheric oxidation of non-methane volatile organic compounds (NMVOCs), is the principal tropospheric reservoir for nitrogen oxide radicals (NOx = NO + NO2). PAN enables the transport and release of NOx to the remote troposphere with major implications for the global distributions of ozone and OH, the main tropospheric oxidants. Simulation of PAN is a challenge for global models because of the dependence of PAN on vertical transport as well as complex and uncertain NMVOC sources and chemistry. Here we use an improved representation of NMVOCs in a global 3-D chemical transport model (GEOS-Chem) and show that it can simulate PAN observations from aircraft campaigns worldwide. The immediate carbonyl precursors for PAN formation include acetaldehyde (44% of the global source), methylglyoxal (30%), acetone (7%), and a suite of other isoprene and terpene oxidation products (19%). A diversity of NMVOC emissions is responsible for PAN formation globally including isoprene (37%) and alkanes (14%). Anthropogenic sources are dominant in the extratropical Northern Hemisphere outside the growing season. Open fires appear to play little role except at high northern latitudes in spring, although results are very sensitive to plume chemistry and plume rise. Lightning NOx is the dominant contributor to the observed PAN maximum in the free troposphere over the South Atlantic.

  15. Atmospheric peroxyacetyl nitrate (PAN): a global budget and source attribution

    NASA Astrophysics Data System (ADS)

    Fischer, E. V.; Jacob, D. J.; Yantosca, R. M.; Sulprizio, M. P.; Millet, D. B.; Mao, J.; Paulot, F.; Singh, H. B.; Roiger, A.; Ries, L.; Talbot, R. W.; Dzepina, K.; Pandey Deolal, S.

    2014-03-01

    Peroxyacetyl nitrate (PAN) formed in the atmospheric oxidation of non-methane volatile organic compounds (NMVOCs) is the principal tropospheric reservoir for nitrogen oxide radicals (NOx = NO + NO2). PAN enables the transport and release of NOx to the remote troposphere with major implications for the global distributions of ozone and OH, the main tropospheric oxidants. Simulation of PAN is a challenge for global models because of the dependence of PAN on vertical transport as well as complex and uncertain NMVOC sources and chemistry. Here we use an improved representation of NMVOCs in a global 3-D chemical transport model (GEOS-Chem) and show that it can simulate PAN observations from aircraft campaigns worldwide. The immediate carbonyl precursors for PAN formation include acetaldehyde (44% of the global source), methylglyoxal (30%), acetone (7%), and a suite of other isoprene and terpene oxidation products (19%). A diversity of NMVOC emissions is responsible for PAN formation globally including isoprene (37%) and alkanes (14%). Anthropogenic sources are dominant in the extratropical Northern Hemisphere outside the growing season. Open fires appear to play little role except at high northern latitudes in spring, although results are very sensitive to plume chemistry and plume rise. Lightning NOx is the dominant contributor to the observed PAN maximum in the free troposphere over the South Atlantic.

  16. 3. RW Meyer Sugar Mill: 18761889. Sorghum pan and boiling ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    3. RW Meyer Sugar Mill: 1876-1889. Sorghum pan and boiling range flue. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: South side of sorghum pan and boiling range flue. In the sorghum pan heat was applied to the cane juice to clarify it, evaporate its water content, and concentrate the sugar crystals. Hot gasses moved through the flue underneath the entire copper bottom of the sorghum pan from the furnace (east) end to the smokestack (west) end of the boiling range. The sorghum pan sides are of redwood. The flue is built of fire-brick, masonry, and portland cement. - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  17. Pan-ebolavirus and Pan-filovirus Mouse Monoclonal Antibodies: Protection against Ebola and Sudan Viruses

    PubMed Central

    Holtsberg, Frederick W.; Shulenin, Sergey; Vu, Hong; Howell, Katie A.; Patel, Sonal J.; Gunn, Bronwyn; Karim, Marcus; Lai, Jonathan R.; Frei, Julia C.; Nyakatura, Elisabeth K.; Zeitlin, Larry; Douglas, Robin; Fusco, Marnie L.; Froude, Jeffrey W.; Saphire, Erica Ollmann; Herbert, Andrew S.; Wirchnianski, Ariel S.; Lear-Rooney, Calli M.; Alter, Galit; Dye, John M.; Glass, Pamela J.; Warfield, Kelly L.

    2015-01-01

    ABSTRACT The unprecedented 2014-2015 Ebola virus disease (EVD) outbreak in West Africa has highlighted the need for effective therapeutics against filoviruses. Monoclonal antibody (MAb) cocktails have shown great potential as EVD therapeutics; however, the existing protective MAbs are virus species specific. Here we report the development of pan-ebolavirus and pan-filovirus antibodies generated by repeated immunization of mice with filovirus glycoproteins engineered to drive the B cell responses toward conserved epitopes. Multiple pan-ebolavirus antibodies were identified that react to the Ebola, Sudan, Bundibugyo, and Reston viruses. A pan-filovirus antibody that was reactive to the receptor binding regions of all filovirus glycoproteins was also identified. Significant postexposure efficacy of several MAbs, including a novel antibody cocktail, was demonstrated. For the first time, we report cross-neutralization and in vivo protection against two highly divergent filovirus species, i.e., Ebola virus and Sudan virus, with a single antibody. Competition studies indicate that this antibody targets a previously unrecognized conserved neutralizing epitope that involves the glycan cap. Mechanistic studies indicated that, besides neutralization, innate immune cell effector functions may play a role in the antiviral activity of the antibodies. Our findings further suggest critical novel epitopes that can be utilized to design effective cocktails for broad protection against multiple filovirus species. IMPORTANCE Filoviruses represent a major public health threat in Africa and an emerging global concern. Largely driven by the U.S. biodefense funding programs and reinforced by the 2014 outbreaks, current immunotherapeutics are primarily focused on a single filovirus species called Ebola virus (EBOV) (formerly Zaire Ebola virus). However, other filoviruses including Sudan, Bundibugyo, and Marburg viruses have caused human outbreaks with mortality rates as high as 90%. Thus

  18. Clinical Evaluation of Youth with Pediatric Acute-Onset Neuropsychiatric Syndrome (PANS): Recommendations from the 2013 PANS Consensus Conference

    PubMed Central

    Frankovich, Jennifer; Cooperstock, Michael; Cunningham, Madeleine W.; Latimer, M. Elizabeth; Murphy, Tanya K.; Pasternack, Mark; Thienemann, Margo; Williams, Kyle; Walter, Jolan; Swedo, Susan E.

    2015-01-01

    Abstract On May 23 and 24, 2013, the First PANS Consensus Conference was convened at Stanford University, calling together a geographically diverse group of clinicians and researchers from complementary fields of pediatrics: General and developmental pediatrics, infectious diseases, immunology, rheumatology, neurology, and child psychiatry. Participants were academicians with clinical and research interests in pediatric autoimmune neuropsychiatric disorder associated with streptococcus (PANDAS) in youth, and the larger category of pediatric acute-onset neuropsychiatric syndrome (PANS). The goals were to clarify the diagnostic boundaries of PANS, to develop systematic strategies for evaluation of suspected PANS cases, and to set forth the most urgently needed studies in this field. Presented here is a consensus statement proposing recommendations for the diagnostic evaluation of youth presenting with PANS. PMID:25325534

  19. Bipedality in chimpanzee (Pan troglodytes) and bonobo (Pan paniscus): testing hypotheses on the evolution of bipedalism.

    PubMed

    Videan, Elaine N; McGrew, W C

    2002-06-01

    A host of ecological, anatomical, and physiological selective pressures are hypothesized to have played a role in the evolution of hominid bipedalism. A referential model, based on the chimpanzee (Pan troglodytes) and bonobo (Pan paniscus), was used to test through experimental manipulation four hypotheses on the evolution of hominid bipedalism. The introduction of food piles (Carry hypothesis) increased locomotor bipedality in both species. Neither the introduction of branches (Display hypothesis) nor the construction of visual barriers (Vigilance hypothesis) altered bipedality in either species. Introduction of raised foraging structures (Forage hypothesis) increased postural bipedality in chimpanzees. These experimental manipulations provided support for carrying of portable objects and foraging on elevated food-items as plausible mechanisms that shaped bipedalism in hominids.

  20. Brief communication: dental development timing in captive Pan paniscus with comparisons to Pan troglodytes.

    PubMed

    Bolter, Debra R; Zihlman, Adrienne L

    2011-08-01

    Dental eruption provides markers of growth and is one component of a chimpanzee's physical development. Dental markers help characterize transitions between life stages, e.g., infant to juvenile. Most of what we know about the timing of development in chimpanzees derives from Pan troglodytes. Much less is known about the sister species, Pan paniscus, with few in captivity and a restricted wild range in central Africa. Here we report on the dental eruption timing for female captive P. paniscus (n = 5) from the Milwaukee and San Diego Zoos whose ages are known and range from birth to age 8.54 years. Some observations were recorded in zoo records on the gingiva during life; others were made at death on the gingiva and on the skeleton. At birth, P. paniscus infants have no teeth emerged. By 0.83 years, all but the deciduous second molars (dm(2) ) (when both upper and lower dentitions are referenced collectively, no super or subscript notation is used) and canines (dc) are emerged. For permanent teeth, results show a sequence polymorphism for an early P4 eruption, not previously described for P. paniscus. Comparisons between P. paniscus and P. troglodytes document absolute timing differences of emergence in upper second incisors (I(2) ), and upper and lower canines (C) and third molars (M3). The genus Pan encompasses variability in growth not previously recognized. These preliminary data suggest that physical growth in captive P. paniscus may be accelerated, a general pattern found in captive P. troglodytes.

  1. Heterochrony and geometric morphometrics: a comparison of cranial growth in Pan paniscus versus Pan troglodytes.

    PubMed

    Mitteroecker, Philipp; Gunz, Philipp; Bookstein, Fred L

    2005-01-01

    Heterochrony, the classic framework in which to study ontogeny and phylogeny, in essence relies on a univariate concept of shape. Though principal component (PC) plots of multivariate shape data seem to resemble classical bivariate allometric plots, the language of heterochrony cannot be translated directly into general multivariate methodology. We simulate idealized multivariate ontogenetic trajectories and explore their appearance in PC plots of shape space and size-shape space. Only if the trajectories of two related species lie along exactly the same path in shape space can the classic terminology of heterochrony apply and pure dissociation of size change against shape change be detected. Regional heterochrony--the variation of apparent heterochrony by region--implies a dissociation of local growth fields and cannot be identified in an overall PC analysis. We exemplify a geometric morphometric approach to these issues using adult and subadult crania of 48 Pan paniscus and 47 Pan troglodytes specimens. On each specimen, we digitized 47 landmarks and 144 semilandmarks on facial curves and the external neurocranial surface. We reject the hypothesis of global heterochrony in the cranium of Pan as well as regional heterochrony for the lower face, the upper face, and the neurocranium.

  2. Public Release of Pan-STARRS Data

    NASA Astrophysics Data System (ADS)

    Flewelling, Heather; Consortium, panstarrs

    2015-08-01

    Pan-STARRS 1 is a 1.8 meter survey telescope, located on Haleakala, Hawaii, with a 1.4 Gigapixel camera, a 7 square degree field of view, and 5 filters (g,r,i,z,y). The public release of data, which is available to everyone, consists of 4 years of data taken between May 2010 and April 2014. Two of the surveys available in the public release are the 3pi survey and the Medium Deep (MD) survey. The 3pi survey has roughly 60 epochs (12 per filter) covering 3/4 of the sky and everything north of -30 degrees declination. The MD survey consists of 10 fields, observed in a couple of filters each night, usually 8 exposures per filter per field, for about 4000 epochs per MD field. The available data product are accessed through the “Postage Stamp Server” and through the Published Science Products Subsystem (PSPS), both of these are available through the Pan-STARRS Science Interface (PSI). The Postage Stamp Server provides images and catalogs for different stages of processing on single exposures, stack images, difference images, and forced photometry. The PSPS is a SQLServer database that can be queried via script or web interface, with a database for each MD field and a large database for the 3pi survey. This database has relative photometry and astrometry and object associations, making it easy to do searches across the entire sky as well as tools to generate lightcurves of individual objects as a function of time.

  3. Summertime PAN on boundary layer over the Northern Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Song, D.; Lee, S.; Lee, G.; Rhee, T. S.

    2012-12-01

    As a part of SHIPPO ( Shipborne Pole to Pole Observation), peroxyacetyl nitrate (PAN) and NO2 have been measured at aboard the R/V Araon during the ship track from Inchon, South Korea to Norm, Alaska, USA from July 14th to 30th, 2012. PAN and NO2 were sampled every 2 minute by a fast chromatograph with luminol-based chemiluminescence detection. In order to assure their detections in remote background airs, we successfully reduced random noise mainly from PMT using ensemble averaging from the 2 min chromatograms in each one hour time interval. With this post-processing analysis, we were able to lower detection limits to 0.01 ppbv and 0.04 ppbv for PAN and NO2, respectively. The preliminary results indicate that the background values ranged from the below the detection limit to 0.37 ppbv (average of 0.06 ppbv) for PAN and 2.05 ppbv (average of 0.24 ppbv) for NO2. It was confirmed that PAN was significant portions of reactive nitrogens in remote marine boundary airs. Occasional enhancements of PAN and NO2 were mainly attributed to the air masses originated from nearby source regions in the Northestern Asia and influenced by ships exhausts. We were able to observe the shifting of equilibrium between PAN and NO2 according to air temperature changes in very clean air masses.

  4. KM+, a mannose-binding lectin from Artocarpus integrifolia: amino acid sequence, predicted tertiary structure, carbohydrate recognition, and analysis of the beta-prism fold.

    PubMed Central

    Rosa, J. C.; De Oliveira, P. S.; Garratt, R.; Beltramini, L.; Resing, K.; Roque-Barreira, M. C.; Greene, L. J.

    1999-01-01

    The complete amino acid sequence of the lectin KM+ from Artocarpus integrifolia (jackfruit), which contains 149 residues/mol, is reported and compared to those of other members of the Moraceae family, particularly that of jacalin, also from jackfruit, with which it shares 52% sequence identity. KM+ presents an acetyl-blocked N-terminus and is not posttranslationally modified by proteolytic cleavage as is the case for jacalin. Rather, it possesses a short, glycine-rich linker that unites the regions homologous to the alpha- and beta-chains of jacalin. The results of homology modeling implicate the linker sequence in sterically impeding rotation of the side chain of Asp141 within the binding site pocket. As a consequence, the aspartic acid is locked into a conformation adequate only for the recognition of equatorial hydroxyl groups on the C4 epimeric center (alpha-D-mannose, alpha-D-glucose, and their derivatives). In contrast, the internal cleavage of the jacalin chain permits free rotation of the homologous aspartic acid, rendering it capable of accepting hydrogen bonds from both possible hydroxyl configurations on C4. We suggest that, together with direct recognition of epimeric hydroxyls and the steric exclusion of disfavored ligands, conformational restriction of the lectin should be considered to be a new mechanism by which selectivity may be built into carbohydrate binding sites. Jacalin and KM+ adopt the beta-prism fold already observed in two unrelated protein families. Despite presenting little or no sequence similarity, an analysis of the beta-prism reveals a canonical feature repeatedly present in all such structures, which is based on six largely hydrophobic residues within a beta-hairpin containing two classic-type beta-bulges. We suggest the term beta-prism motif to describe this feature. PMID:10210179

  5. Abundance of Jackfruit ( Artocarpus heterophyllus) Affects Group Characteristics and Use of Space by Golden-Headed Lion Tamarins ( Leontopithecus chrysomelas) in Cabruca Agroforest

    NASA Astrophysics Data System (ADS)

    Oliveira, Leonardo C.; Neves, Leonardo G.; Raboy, Becky E.; Dietz, James M.

    2011-08-01

    Cabruca is an agroforest of cacao trees shaded by native forest trees. It is the predominant vegetation type throughout eastern part of the range of the golden-headed lion tamarins, Leontopithecus chrysomelas, an endangered primate endemic to Atlantic Forest. Understanding how lion tamarins use this agroforest is a conservation priority. To address this question, we documented the diet, home range size, group sizes and composition, density, number of litters and body condition of lion tamarins living in cabruca, and other habitats. Jackfruit, Artocarpus heterophyllus, was the most used species used by lion tamarins in cabruca and was widely available and used throughout the year. In cabruca, home range size was the smallest (22-28 ha) and density of lion tamarins was the highest (1.7 ind/ha) reported for the species. Group size averaged 7.4 individuals and was not significantly different among the vegetation types. In cabruca, groups produced one or two litters a year, and all litters were twins. Adult males in cabruca were significantly heavier than males in primary forest. Our study is the first to demonstrate that breeding groups of golden-headed lion tamarins can survive and reproduce entirely within cabruca agroforest. Jackfruit proved to be a keystone resource for lion tamarins in cabruca, and bromeliads were important as an animal prey foraging microhabitat. In cases where cabruca contains concentrated resources, such as jackfruit and bromeliads, lion tamarins may not only survive and reproduce but may fare better than in other forest types, at least for body condition and reproduction.

  6. Antioxidant activity of Artocarpus heterophyllus Lam. (Jack Fruit) leaf extracts: remarkable attenuations of hyperglycemia and hyperlipidemia in streptozotocin-diabetic rats.

    PubMed

    Omar, Haidy S; El-Beshbishy, Hesham A; Moussa, Ziad; Taha, Kamilia F; Singab, Abdel Nasser B

    2011-04-05

    The present study examines the antioxidative, hypoglycemic, and hypolipidemic activities of Artocarpus heterophyllus (jack fruit) leaf extracts (JFEs). The 70% ethanol (JFEE), n-butanol (JFBE), water (JFWE), chloroform (JFCE), and ethyl acetate (JFEAE) extracts were obtained. Both JFEE and JFBE markedly scavenge diphenylpicrylhydrazyl radical and chelate Fe+2 in vitro. A compound was isolated from JFBE and identified using 1D and 2D 1H- and 13C-NMR. The administration of JFEE or JFBE to streptozotocin (STZ)-diabetic rats significantly reduced fasting blood glucose (FBG) from 200 to 56 and 79 mg%, respectively; elevated insulin from 10.8 to 19.5 and 15.1 µU/ml, respectively; decreased lipid peroxides from 7.3 to 5.4 and 5.9 nmol/ml, respectively; decreased %glycosylated hemoglobin A1C (%HbA1C) from 6.8 to 4.5 and 5.0%, respectively; and increased total protein content from 2.5 to 6.3 and 5.7 mg%, respectively. Triglycerides (TG), total cholesterol (TC), low-density lipoprotein cholesterol (LDL-C), VLDL-C, and LDL/HDL ratio significantly declined by -37, -19, -23, -37, and -39%, respectively, in the case of JFEE; and by -31, -14, -17, -31, and -25%, respectively, in the case of JFBE; as compared to diabetic rats. HDL-C increased by +37% (JFEE) and by +11% (JFBE). Both JFEE and JFBE have shown appreciable results in decreasing FBG, lipid peroxides, %HbA1C, TC, LDL-C, and TG levels, and increasing insulin, HDL-C, and protein content. The spectrometric analysis confirmed that the flavonoid isolated from JFBE was isoquercitrin. We can conclude from this study that JFEE and JFBE exert hypoglycemic and hypolipidemic effects in STZ-diabetic rats through an antioxidative pathway that might be referred to their flavonoid contents.

  7. Artocarpus altilis CG-901 alters critical nodes in the JH1-kinase domain of Janus kinase 2 affecting upstream JAK/STAT3 signaling.

    PubMed

    Nash, Oyekanmi; Omotuyi, Olaposi; Lee, Joonku; Kwon, Byoung-Mog; Ogbadu, Lucy

    2015-11-01

    As a key step in achieving low-cost, easily accessible anti-cancer therapy for low- and middle-income countries, we recently established the scientific basis for the folkloric use of Artocarpus altilis for the treatment of cancer by investigating the geranyl dihydrochalcone (CG-901) content and its interference with signal transducer and activator of transcription 3 (STAT3) phosphorylation and blockage of further downstream signaling. In the current study, the CG-901 upstream target was queried by chemical fingerprinting similarity assessment, semi-empirical (PM6ESCF) QMMM and molecular dynamics (MD) simulation. Moderate (∼0.4) to high (∼0.7) Tanimoto scores were found when the CG-901 scaffold was compared to ligands co-crystallized with Janus kinases (JAK) 1-3. High negative energy values were obtained when the CG-901 was treated semi-empirically (PM6ESCF) within the classical field of JAK (1-3). Multiple nanosecond MD simulations showed that CG-901 did not cause any large structural perturbations in the nucleotide-binding, activation and catalytic loops within the kinase (JH1) domain of JAK (1-3); however, it reduced the energy required to attain metastability along the path to energy minima conformation. In comparison to JAK1 and Apo-state JAK2, JAK2-bound CG-901 exhibited a highly re-organized key intra-domain protein network; indicating atomic level interference with inter-residue communication. In conclusion, CG-901 isolated from A. altilis represents a broad-spectrum JAK inhibitor, which may underlie the mechanism of STAT3 phosphorylation blockage. Graphical abstract Upper panel Janus kinase 2 upstream signaling pathway. Lower panel Apo-JAK2 (left) and CG-901-bound JAK2 (right).

  8. Hemostatic potential of latex proteases from Tabernaemontana divaricata (L.) R. Br. ex. Roem. and Schult. and Artocarpus altilis (Parkinson ex. F.A. Zorn) Forsberg.

    PubMed

    Singh, Maheshwari Kumari; Usha, R; Hithayshree, K R; Bindhu, O S

    2015-01-01

    Pharmacological properties exhibited by latex of plants are due to various biologically active compounds including several proteolytic enzymes. Present study evaluates hemostatic potential of Tabernaemontana divaricata and Artocarpus altilis from Apocynaceae and Moraceae families respectively. The latex of these plants were initially subjected to dialysis and crude extracts were estimated for proteolytic activity using casein as the substrate. Mean caseinolytic activity for 100 μg of latex protein was found to be 56.16 ± 0.57 and 45 ± 0.3 U/h for T. divaricata and A. altilis respectively. Caseinolytic activity by both the plant extracts was higher than standard proteases, papain and trypsin. However the difference was significant (p < 0.05) with papain alone. Crude enzymes (CE) from both plants exhibited coagulant activity on human platelet poor plasma by recalcification time. A significant reduction in clotting time was exhibited by T. divaricata compared to A. altilis (p < 0.05). These results were further substantiated with fibrinogen agarose plate assay. Crude enzyme of both plants also hydrolyzed blood clot. Mean % of thrombolysis by T. divaricata was 80.75 ± 1.2 and that of A. altilis was 70.24 ± 1.52. Inhibition studies confirmed cysteine protease nature of CE. Comparative analysis revealed T. divaricata to be the best among the two for its hemostatic potential. This study scientifically validates the use of latex from these plants in the management of fresh cuts or wounds.

  9. Abundance of jackfruit (Artocarpus heterophyllus) affects group characteristics and use of space by golden-headed lion tamarins (Leontopithecus chrysomelas) in Cabruca agroforest.

    PubMed

    Oliveira, Leonardo C; Neves, Leonardo G; Raboy, Becky E; Dietz, James M

    2011-08-01

    Cabruca is an agroforest of cacao trees shaded by native forest trees. It is the predominant vegetation type throughout eastern part of the range of the golden-headed lion tamarins, Leontopithecus chrysomelas, an endangered primate endemic to Atlantic Forest. Understanding how lion tamarins use this agroforest is a conservation priority. To address this question, we documented the diet, home range size, group sizes and composition, density, number of litters and body condition of lion tamarins living in cabruca, and other habitats. Jackfruit, Artocarpus heterophyllus, was the most used species used by lion tamarins in cabruca and was widely available and used throughout the year. In cabruca, home range size was the smallest (22-28 ha) and density of lion tamarins was the highest (1.7 ind/ha) reported for the species. Group size averaged 7.4 individuals and was not significantly different among the vegetation types. In cabruca, groups produced one or two litters a year, and all litters were twins. Adult males in cabruca were significantly heavier than males in primary forest. Our study is the first to demonstrate that breeding groups of golden-headed lion tamarins can survive and reproduce entirely within cabruca agroforest. Jackfruit proved to be a keystone resource for lion tamarins in cabruca, and bromeliads were important as an animal prey foraging microhabitat. In cases where cabruca contains concentrated resources, such as jackfruit and bromeliads, lion tamarins may not only survive and reproduce but may fare better than in other forest types, at least for body condition and reproduction.

  10. Moracin C, A Phenolic Compound Isolated from Artocarpus heterophyllus, Suppresses Lipopolysaccharide-Activated Inflammatory Responses in Murine Raw264.7 Macrophages

    PubMed Central

    Yao, Xue; Wu, Dang; Dong, Ningning; Ouyang, Ping; Pu, Jiaqian; Hu, Qian; Wang, Jingyuan; Lu, Weiqiang; Huang, Jin

    2016-01-01

    Artocarpus heterophyllus, a popular tropical fruit commonly known as the jackfruit tree, is normally planted in subtropical or tropical areas. Since a variety of phytochemicals isolated from A. heterophyllus have been found to possess potently anti-inflammatory, antiviral and antimalarial activities, researchers have devoted much interest to its potential pharmaceutical value. However, the exact mechanism underlying its anti-inflammatory activity is not well characterized. In this study, seven natural products isolated from A. heterophyllus, including 25-Hydroxycycloart-23-en-3-one (HY), Artocarpin (AR), Dadahol A (DA), Morachalcone A (MA), Artoheterophyllin B (AB), Cycloheterophyllin (CY) and Moracin C (MC) were collected. Lipopolysaccharide (LPS)-stimulated inflammatory response in RAW264.7 macrophages were used in this study. Among these compounds, MC significantly inhibited LPS-activated reactive oxygen species (ROS) and nitric oxide (NO) release without marked cytotoxicity. Furthermore, MC effectively reduced LPS stimulated up-regulation of mRNA and protein expression of inducible nitric oxide synthase (iNOS), cyclooxygenase-2 (COX-2), and serval pro-inflammatory cytokines (interleukin-1β (IL-1β), interleukin-6 (IL-6) and tumor necrosis factor α (TNF-α)). Mechanistic studies revealed that the anti-inflammatory effect of MC was associated with the activation of the mitogen activated protein kinases (MAPKs) (including p38, ERK and JNK) and nuclear factor-κB (NF-κB) pathways, especially reducing the nuclear translocation of NF-κB p65 subunit as revealed by nuclear separation experiment and confocal microscopy. PMID:27463712

  11. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 3 2013-01-01 2013-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  12. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 3 2012-01-01 2012-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  13. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 3 2011-01-01 2011-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  14. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 3 2010-01-01 2010-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  15. 7 CFR 58.217 - Evaporators and/or vacuum pans.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 3 2014-01-01 2014-01-01 false Evaporators and/or vacuum pans. 58.217 Section 58.217....217 Evaporators and/or vacuum pans. Evaporators or vacuum pans or both, with open type condensers... Sanitary Standards for Milk and Milk Products Evaporators and Vacuum Pans. When enclosed type...

  16. Detecting inhomogeneities in pan evaporation time series

    NASA Astrophysics Data System (ADS)

    Kirono, D. G. C.

    2009-04-01

    There is increasingly growing demand for evaporation data for studies of surface water and energy fluxes, especially for studies which address the impacts of global warming. To serve this purpose, a homogeneous evaporation data are necessary. This paper describes the use of two tests for detecting and adjusting discontinuities in Class A pan evaporation time series for 28 stations across Australia, and illustrates the benefit of using corrected records in climate studies. The two tests being the bivariate test of Maronna and Yohai (1978), also known as the Potter method (WMO 2003), and the RHTest of Wang and Feng (2004). Overall, 58 per cent of the inhomogeneities detected by the bivariate test were also identified by the RHTest. The fact that the other 42 per cent of inhomogeneities were not consistently detected is due to different sensitivities of the two methods. Ninety-two per cent of the inhomogeneities detected by the bivariate test are consistent with documented changes that can be strongly associated with the discontinuity. Having identified inhomogeneities, the adjusments were only applied to records which contained inhomogeneities that could be verified as having a non-climatic origin. The benefit of using the original and adjusted pan evaporation records in a climate study were then investigated from two points of view: correlation analyses and trend analysis. As an illustration, the results show that the trend (1970-2004) in the all-stations average was -2.8±1.7 for the original data but only -0.7±1.6 mm/year/year for the adjusted data, demonstrating the importance of screening the data before their use in climate studies. References Maronna, R. and Yohai, V.J. 1978. A bivariate test for the detection of a systematic change in mean. J. Amer. Statis. Assoc., 73, 640-645. Wang, X.L. and Feng, Y. 2004. RHTest User manual. Available from http://cccma.seos.uvic.ca/ETCCDMI/RHTestUserManual.doc WMO. 2003. Guidelines on climate metadata and homogenization

  17. 15. RW Meyer Sugar Mill: 18761889. Sorghum pan and boiling ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    15. RW Meyer Sugar Mill: 1876-1889. Sorghum pan and boiling range flue. Manufactured by John Nott & Co., Honolulu, Hawaii, 1878. View: North side of sorghum pan and boiling range flue, with furnace-end in background. In the sorghum pan heat was applied to the cane juice to clarify it, evaporate its water content, and concentrate the sugar crystals. Hot gasses moved through the flue underneath the entire copper bottom of the sorghum pan from the furnace end (in background) to the smokestack end (in foreground). After the hot cane juice moved through the separate compartments until it reached the final compartment (now missing two sides) where it was drawn out from the copper lip in the corner. - R. W. Meyer Sugar Mill, State Route 47, Kualapuu, Maui County, HI

  18. 12. Level 6 gringing pans, pump above dorr thickener. View ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. Level 6 gringing pans, pump above dorr thickener. View to west. - Kennecott Copper Corporation, Concentration Mill, On Copper River & Northwestern Railroad, Kennicott, Valdez-Cordova Census Area, AK

  19. Improvements in analysis of atmospheric peroxyacetyl nitrate (PAN)

    NASA Astrophysics Data System (ADS)

    Helmig, Detlev; Müller, Josef; Klein, Werner

    Common analytical techniques for PAN determination were modified in order to obtain a sensitive and automatic analysis system. PAN was synthesized by nitration of peracetic acid in hexane, The PAN/hexane solution was purified by water extraction. The quantification was performed determining acetate or nitrite by ion chromatography following alkaline hydrolysis. The validity was checked by liquid i.r. speetroscopy. NMR studies revealed a singulet signal at 2.27 ppm. The precision and sensitivity of the gas Chromatographic analyses were improved by the use of wide bore capillary columns coated with Carbowax 400. The developed system enables automatic and continuous PAN measurements at a 10 min sampling sequence and with a detection limit of 50 ppt.

  20. Detection and Behavior of Pan Wakes in Saturn's A Ring

    NASA Astrophysics Data System (ADS)

    Horn, Linda J.; Showalter, Mark R.; Russell, Christopher T.

    1996-12-01

    Six previously unseen Pan wakes are found interior and exterior to the Encke gap in Saturn's A ring, one in the Voyager 2 photopolarimeter (PPS) stellar occultation data and five in the Voyager 1 radio science (RSS) earth occultation data. Pan orbits at the center of the Encke gap and maintains it. Originally it was hypothesized that a wake would be completely damped by the time it reached a longitude of 360° relative to Pan. However, five of the six newly detected wakes are at longitudes in excess of 360° and are a result of earlier encounters with Pan. The sixth is the first detection of the RSS outer Pan wake. The new PPS inner wake is at a longitude of 389.8°. The new RSS inner wakes are at longitudes of 519.4° ± 1.6° and 879.4° ± 1.6°. The RSS outer wakes are at longitudes of 200.6° ± 1.6°, 560.6° ± 1.6°, and 920.6° ± 1.6°. Because of the time needed for a wake to develop after encountering Pan, the higher order wakes (longitude >360°) can be more prominent than their lower order counterparts which are superimposed at the same location. The radial dispersion behavior of the Pan wakes are characterized using a Burg autoregressive power spectral algorithm. The wake radial wavelength behavior is compared to a simple model which ignores collisions and self-gravity. The four wakes with longitudes below 360° show an average deviation of 0-3% from the predicted wavelengths, indicative of the strength of collective effects. The detection of Pan wakes at longitudes greater than 360° demonstrates that wakes persist for much longer than originally hypothesized and may interact with one another. The presence and characteristics of these wakes will provide an important test of kinetic theory models.

  1. Summertime Acyl peroxy nitrates (PANs) in the Colorado Front Range

    NASA Astrophysics Data System (ADS)

    Zaragoza, J.; Fischer, E. V.; McDuffie, E. E.; Dube, W. P.; Brown, S. S.; Farmer, D.; Flocke, F. M.

    2015-12-01

    The Colorado Front Range (CFR) currently violates the 8-hour National Ambient Air Quality Standard for ozone (O3). The Front Range Air Pollution and Photochemistry Éxperiment (FRAPPÉ) was an extensive aircraft and ground-based campaign aimed at characterizing the regional chemical environment in the CFR. Campaign goals were to constrain the emissions of O3 precursors and the subsequent O3 formation rates. A large suite of trace gases and aerosols were measured during FRAPPÉ at the Boulder Atmospheric Observatory (BAO), including O3, NOx, NOy, CH4, CO, CO2, and several PAN homologues. The BAO, located 35 km north of Denver and on the southwestern side of the Denver-Julesburg Basin, affords the opportunity to sample a wide variety of air masses, including those impacted by emissions from oil and gas development, agriculture, and the urban Denver plume. Here we present an analysis of PAN measurements during FRAPPÉ. The PPN/PAN ratio observed (~20%) at BAO during FRAPPÉ is indicative of chemistry dominated by anthropogenic VOCs. We used the relationships between PAN, PPN, and MPAN to estimate the contribution of isoprene chemistry to local O3 production. We found that the estimated contribution of isoprene chemistry to O3 is less than 5 ppbv. We also investigated the meteorological conditions leading to the most extreme PAN abundances. We found that Denver Cyclones, mesoscale conditions that allow for potential recirculation of pollutants, were present on three out of the four days with PAN mixing ratios much greater than 1 ppbv. We plan to continue exploring specific days characterized by measurements of elevated PAN and O3 with a photochemical box model to attempt to understand the mix of VOC chemistry responsible for the extremely consistent observed PPN/PAN ratio.

  2. Influence of peroxyacetyl nitrate (PAN) on water stress in bean plants

    SciTech Connect

    Starkey, T.E.; Davis, D.D.; Pell, E.J.; Merrill, W.

    1981-08-01

    Bean plants (Phaseolus vulgaris L. cvs. Provider and Stringless Black Valentine) were exposed to 395 ..mu..g/m/sup 3/ (0.08 ppm) peroxyacetyl nitrate (PAN) for 0.5 hr and subjected to drought stress following exposure. PAN influenced the plant potential of PAN-sensitive Provider resulting in visible wilting and reduced soil moisture content. There was no effect of PAN on the water relations of the PAN-tolerant Stringless Black Valentine.

  3. Comparing infant and juvenile behavior in bonobos (Pan paniscus) and chimpanzees (Pan troglodytes): a preliminary study.

    PubMed

    De Lathouwers, Mieke; Van Elsacker, Linda

    2006-10-01

    The dichotomy between the two Pan species, the bonobo (Pan paniscus) and chimpanzee (Pan troglodytes) has been strongly emphasized until very recently. Given that most studies were primarily based on adult individuals, we shifted the "continuity versus discontinuity" discussion to the infant and juvenile stage. Our aim was to test quantitatively, some conflicting statements made in literature considering species differences between immature bonobos and chimpanzees. On one hand it is suggested that infant bonobos show retardation in motor and social development when compared with chimpanzees. Additionally it is expected that the weaning process is more traumatic to chimpanzee than bonobo infants. But on the other hand the development of behaviors is expected to be very similar in both species. We observed eight mother-infant pairs of each species in several European zoos. Our preliminary research partially confirms that immature chimpanzees seem spatially more independent, spending more time at a larger distance from their mother than immature bonobos. However, the other data do not seem to support the hypothesis that bonobo infants show retardation of motor or social development. The development of solitary play, environmental exploration, social play, non-copulatory mounts and aggressive interactions do not differ between the species. Bonobo infants in general even groom other group members more than chimpanzee infants. We also found that older bonobo infants have more nipple contact than same aged chimpanzees and that the weaning process seems to end later for bonobos than for immature chimpanzee. Additionally, although immature bonobos show in general more signs of distress, our data suggest that the weaning period itself is more traumatic for chimpanzees.

  4. BPGA- an ultra-fast pan-genome analysis pipeline.

    PubMed

    Chaudhari, Narendrakumar M; Gupta, Vinod Kumar; Dutta, Chitra

    2016-04-13

    Recent advances in ultra-high-throughput sequencing technology and metagenomics have led to a paradigm shift in microbial genomics from few genome comparisons to large-scale pan-genome studies at different scales of phylogenetic resolution. Pan-genome studies provide a framework for estimating the genomic diversity of the dataset, determining core (conserved), accessory (dispensable) and unique (strain-specific) gene pool of a species, tracing horizontal gene-flux across strains and providing insight into species evolution. The existing pan genome software tools suffer from various limitations like limited datasets, difficult installation/requirements, inadequate functional features etc. Here we present an ultra-fast computational pipeline BPGA (Bacterial Pan Genome Analysis tool) with seven functional modules. In addition to the routine pan genome analyses, BPGA introduces a number of novel features for downstream analyses like core/pan/MLST (Multi Locus Sequence Typing) phylogeny, exclusive presence/absence of genes in specific strains, subset analysis, atypical G + C content analysis and KEGG &COG mapping of core, accessory and unique genes. Other notable features include minimum running prerequisites, freedom to select the gene clustering method, ultra-fast execution, user friendly command line interface and high-quality graphics outputs. The performance of BPGA has been evaluated using a dataset of complete genome sequences of 28 Streptococcus pyogenes strains.

  5. BPGA- an ultra-fast pan-genome analysis pipeline

    PubMed Central

    Chaudhari, Narendrakumar M.; Gupta, Vinod Kumar; Dutta, Chitra

    2016-01-01

    Recent advances in ultra-high-throughput sequencing technology and metagenomics have led to a paradigm shift in microbial genomics from few genome comparisons to large-scale pan-genome studies at different scales of phylogenetic resolution. Pan-genome studies provide a framework for estimating the genomic diversity of the dataset, determining core (conserved), accessory (dispensable) and unique (strain-specific) gene pool of a species, tracing horizontal gene-flux across strains and providing insight into species evolution. The existing pan genome software tools suffer from various limitations like limited datasets, difficult installation/requirements, inadequate functional features etc. Here we present an ultra-fast computational pipeline BPGA (Bacterial Pan Genome Analysis tool) with seven functional modules. In addition to the routine pan genome analyses, BPGA introduces a number of novel features for downstream analyses like core/pan/MLST (Multi Locus Sequence Typing) phylogeny, exclusive presence/absence of genes in specific strains, subset analysis, atypical G + C content analysis and KEGG & COG mapping of core, accessory and unique genes. Other notable features include minimum running prerequisites, freedom to select the gene clustering method, ultra-fast execution, user friendly command line interface and high-quality graphics outputs. The performance of BPGA has been evaluated using a dataset of complete genome sequences of 28 Streptococcus pyogenes strains. PMID:27071527

  6. Migration of ATLAS PanDA to CERN

    NASA Astrophysics Data System (ADS)

    Stewart, Graeme Andrew; Klimentov, Alexei; Koblitz, Birger; Lamanna, Massimo; Maeno, Tadashi; Nevski, Pavel; Nowak, Marcin; Emanuel De Castro Faria Salgado, Pedro; Wenaus, Torre

    2010-04-01

    The ATLAS Production and Distributed Analysis System (PanDA) is a key component of the ATLAS distributed computing infrastructure. All ATLAS production jobs, and a substantial amount of user and group analysis jobs, pass through the PanDA system, which manages their execution on the grid. PanDA also plays a key role in production task definition and the data set replication request system. PanDA has recently been migrated from Brookhaven National Laboratory (BNL) to the European Organization for Nuclear Research (CERN), a process we describe here. We discuss how the new infrastructure for PanDA, which relies heavily on services provided by CERN IT, was introduced in order to make the service as reliable as possible and to allow it to be scaled to ATLAS's increasing need for distributed computing. The migration involved changing the backend database for PanDA from MySQL to Oracle, which impacted upon the database schemas. The process by which the client code was optimised for the new database backend is discussed. We describe the procedure by which the new database infrastructure was tested and commissioned for production use. Operations during the migration had to be planned carefully to minimise disruption to ongoing ATLAS offline computing. All parts of the migration were fully tested before commissioning the new infrastructure and the gradual migration of computing resources to the new system allowed any problems of scaling to be addressed.

  7. Area-to-point regression kriging for pan-sharpening

    NASA Astrophysics Data System (ADS)

    Wang, Qunming; Shi, Wenzhong; Atkinson, Peter M.

    2016-04-01

    Pan-sharpening is a technique to combine the fine spatial resolution panchromatic (PAN) band with the coarse spatial resolution multispectral bands of the same satellite to create a fine spatial resolution multispectral image. In this paper, area-to-point regression kriging (ATPRK) is proposed for pan-sharpening. ATPRK considers the PAN band as the covariate. Moreover, ATPRK is extended with a local approach, called adaptive ATPRK (AATPRK), which fits a regression model using a local, non-stationary scheme such that the regression coefficients change across the image. The two geostatistical approaches, ATPRK and AATPRK, were compared to the 13 state-of-the-art pan-sharpening approaches summarized in Vivone et al. (2015) in experiments on three separate datasets. ATPRK and AATPRK produced more accurate pan-sharpened images than the 13 benchmark algorithms in all three experiments. Unlike the benchmark algorithms, the two geostatistical solutions precisely preserved the spectral properties of the original coarse data. Furthermore, ATPRK can be enhanced by a local scheme in AATRPK, in cases where the residuals from a global regression model are such that their spatial character varies locally.

  8. The Pan-STARRS Gigapixel Camera

    NASA Astrophysics Data System (ADS)

    Tonry, J.; Onaka, P.; Luppino, G.; Isani, S.

    The Pan-STARRS project will undertake repeated surveys of the sky to find "Killer Asteroids", everything else which moves or blinks, and to build an unprecedented deep and accurate "static sky". The key enabling technology is a new generation of large format cameras that offer an order of magnitude improvement in size, speed, and cost compared to existing instruments. In this talk, we provide an overview of the camera research and development effort being undertaken by the Institute for Astronomy Camera Group in partnership with MIT Lincoln Laboratories. The main components of the camera subsystem will be identified and briefly described as an introduction to the more specialized talks presented elsewhere at this conference. We will focus on the development process followed at the IfA utilizing the orthogonal transfer CCD in building cameras of various sizes from a single OTA "mcam", to a 16-OTA "Test Camera", to the final 64-OTA 1.4 billion pixel camera (Gigapixel Camera #1 or GPC1) to be used for PS1 survey operations. We also show the design of a deployable Shack-Hartmann device residing in the camera and other auxiliary instrumentation used to support camera operations.

  9. Pan-STARRS-1 Medium Deep Survey

    NASA Astrophysics Data System (ADS)

    Huber, Mark

    2015-08-01

    The Panoramic Survey Telescope And Rapid Response System-1 (Pan-STARRS-1, PS1) has been in full science operation since Spring 2010 and concluded the observing program for the PS1 Science Consortium (PS1SC) in early 2014. The Medium Deep Survey (MDS) component of the program regularly visited 10 fields (~7 sq. deg. each) with significant multi-wavelength overlap from previous and concurrent surveys (e.g. SDSS, DEEP2, CDFS, COSMOS, GALEX) for 25% of the total time allocation. The cadence generally includes the g,r,i,z filters for a MDS field every 3 days over the 6-8 month season the field is visible, with the y filter done primarily during bright time. The nightly stacks of eight exposures typically reach depths of r,i~23.5 mag. Development work continued to improve the single exposure processing though to deep stacks during the transient event discovery and other science consortium programs over the course of the survey, the culmination of those improvements being applied in a more uniformly reprocessed dataset used for the public data release. A summary of the MDS public data release products will be presented.For details on PS1 and the Science Collaboration, visit http://ps1sc.org/

  10. Pan-STARRS1 Medium Deep Survey

    NASA Astrophysics Data System (ADS)

    Huber, Mark; PS1 Science Consortium; Pan-STARRS IPP Team

    2017-01-01

    The Panoramic Survey Telescope And Rapid Response System 1 (Pan-STARRS1, PS1) has been in full science operation since Spring 2010 with the PS1 Science Consortium (PS1SC) observational program concluding in early 2014. The Medium Deep Survey (MDS) component of the program, allocated 25% of the time, regularly visited 10 fields (~7 sq. deg. each) with significant multi-wavelength overlap from previous and concurrent surveys (e.g. SDSS, DEEP2, CDFS, COSMOS, GALEX). The cadence generally includes the g & r, i, z filters in a 3 day cycle with nightly 5-sigma point source stack depths of r,i~23.5 mag and switching to the y filter primarily during bright time over the 6-8 month season a MDS field is visible. While nightly processing was regularly producing data for the transient event discovery and other science consortium programs with incremental improvements during the survey, the entire MDS dataset has now been uniformly reprocessed for the upcoming public data release. The MDS data products, to be made available after the full release of the 3PI dataset, will be summarily presented.For details on PS1 and the Science Consortium, visit http://ps1sc.org/

  11. Chimpanzees (Pan troglodytes) and bonobos (Pan paniscus) quantify split solid objects.

    PubMed

    Cacchione, Trix; Hrubesch, Christine; Call, Josep

    2013-01-01

    Recent research suggests that gorillas' and orangutans' object representations survive cohesion violations (e.g., a split of a solid object into two halves), but that their processing of quantities may be affected by them. We assessed chimpanzees' (Pan troglodytes) and bonobos' (Pan paniscus) reactions to various fission events in the same series of action tasks modelled after infant studies previously run on gorillas and orangutans (Cacchione and Call in Cognition 116:193-203, 2010b). Results showed that all four non-human great ape species managed to quantify split objects but that their performance varied as a function of the non-cohesiveness produced in the splitting event. Spatial ambiguity and shape invariance had the greatest impact on apes' ability to represent and quantify objects. Further, we observed species differences with gorillas performing lower than other species. Finally, we detected a substantial age effect, with ape infants below 6 years of age being outperformed by both juvenile/adolescent and adult apes.

  12. Volumetric and lateralized differences in selected brain regions of chimpanzees (Pan troglodytes) and bonobos (Pan paniscus).

    PubMed

    Hopkins, William D; Lyn, Heidi; Cantalupo, Claudio

    2009-12-01

    The two species of Pan, bonobos and common chimpanzees, have been reported to have different social organization, cognitive and linguistic abilities and motor skill, despite their close biological relationship. Here, we examined whether bonobos and chimpanzee differ in selected brain regions that may map to these different social and cognitive abilities. Eight chimpanzees and eight bonobos matched on age, sex and rearing experiences were magnetic resonance images scanned and volumetric measures were obtained for the whole brain, cerebellum, striatum, motor-hand area, hippocampus, inferior frontal gyrus and planum temporale. Chimpanzees had significantly larger cerebellum and borderline significantly larger hippocampus and putamen, after adjusting for brain size, compared with bonobos. Bonobos showed greater leftward asymmetries in the striatum and motor-hand area compared with chimpanzees. No significant differences in either the volume or lateralization for the so-called language homologs were found between species. The results suggest that the two species of Pan are quite similar neurologically, though some volumetric and lateralized differences may reflect inherent differences in social organization, cognition and motor skills.

  13. Spontaneous triadic engagement in bonobos (Pan paniscus) and chimpanzees (Pan troglodytes).

    PubMed

    MacLean, Evan; Hare, Brian

    2013-08-01

    Humans are believed to have evolved a unique motivation to participate in joint activities that first develops during infancy and supports the development of shared intentionality. We conducted five experiments with bonobos (Pan paniscus) and chimpanzees (Pan troglodytes) (Total n = 119) to assess their motivation to spontaneously participate in joint activities with a conspecific or a human. We found that even the youngest subjects preferred to interact together with a human and a toy rather than engaging in an identical game alone. In addition, we found that subjects could spontaneously interact with a human in a turn-taking game involving passing a ball back and forth and used behaviors to elicit additional interaction when the game was disrupted. However, when paired with a conspecific, subjects preferred to interact with an object individually rather than together. Our results indicate that nonhuman apes are motivated to engage in triadic activities if they occur spontaneously with humans and require a minimum amount of coordination. These findings leave open the question of whether these activities are coordinated through shared intentions.

  14. The limits of endowment effects in great apes (Pan paniscus, Pan troglodytes, Gorilla gorilla, Pongo pygmaeus).

    PubMed

    Kanngiesser, Patricia; Santos, Laurie R; Hood, Bruce M; Call, Josep

    2011-11-01

    The endowment effect describes the bias that people often value things that they possess more than things they do not possess. Thus, they are often reluctant to trade items in their possession for items of equivalent value. Some nonhuman primates appear to share this bias with humans, but it remains an open question whether they show endowment effects to the same extent as humans do. We investigated endowment effects in all four great ape species (Pan paniscus, Pan troglodytes, Gorilla gorilla, Pongo pygmaeus) by varying whether apes were endowed with food items (Experiment 1, N = 22) or tools that were instrumental in retrieving food (Experiment 2, N = 23). We first assessed apes' preferences for items of a pair and their willingness to trade items in their possession. We then endowed apes with one item of a pair and offered them to trade for the other item. Apes showed endowment effects for food, but not for tools. In Experiment 3, we endowed bonobos (N = 4) and orangutans (N = 5) with either one or 12 food items. Endowment effects did not differ between species and were not influenced by the number of endowed food items. Our findings suggest that endowment effects in great apes are restricted to immediate food gratification and remain unaffected by the quantity of food rewards. However, endowment effects do not seem to extend to other, nonconsumable possessions even when they are instrumental in retrieving food. In general, apes do not show endowment effects across a range of different commodities as humans typically do.

  15. Modeling the joined performance of PanSTARRS1 and PanSTARRS2 telescopes

    NASA Astrophysics Data System (ADS)

    Lilly (Schunova), Eva; Wainscoat, Richard J.; Weryk, Robert J.

    2016-10-01

    We have performed detailed simulations of the 1st and the 2nd telescope of the Panoramatic Survey Telescope and Rapid response System (PanSTARRS, Morgan et al. 2012, SPIE Conference Series, Vol. 8444; Chambers et al. 2007, Bulletin of the American Astronomical Society, Vol. 39, #142.06) in order to assess their combined performance and to optimize survey strategy for discovery and follow-up observations of near-Earth asteroids (NEAs).PanSTARRS1 (PS1) is situated on the summit of Haleakala, Maui (observatory code F51) and has been operated by the University of Hawaii since the spring of 2010. PS1 has a 1.8 m diameter primary mirror with an ~7 deg2 field of view and can survey ~900 deg2/night for moving objects.PS2 is located adjacent to PS1, and is similar, but benefits from many improvements coming from our experience with PS1. PS2 will be operational very soon.We will show how the best and the worst case scenarios of observing conditions (i.e. regarding the weather and the position of the Galactic plane) affect the NEA detection efficiency during a 1-month long survey for several PS1 and PS2 observing and follow-up strategies.

  16. Personality in wild bonobos (Pan paniscus).

    PubMed

    Garai, Cintia; Weiss, Alexander; Arnaud, Coline; Furuichi, Takeshi

    2016-11-01

    To understand the evolution of personality structure requires examining personality dimensions in multiple species using a common set of traits. Little research has been conducted on personality in wild populations of nonhuman primates. Using behavioral observations and questionnaire ratings, we examined factors influencing personality in 16 wild bonobos (Pan paniscus) at Wamba, Luo Scientific Reserve, Democratic Republic of the Congo. We extracted five factors from 31 of the items from the Hominoid Personality Questionnaire (HPQ) and three factors from observed behaviors. The HPQ factors were labeled UnemotionalityQ , FriendlinessQ , AggressivenessQ , IrritabilityQ , and ActivityQ . The behavioral factors were labeled GroomingB , PlayfulnessB , and IntroversionB . We established the convergent and divergent validity of these factors by obtaining correlations between the HPQ and behavioral factors. We tested for sex differences and found that males were significantly higher on IntroversionB and significantly lower in IrritabilityQ . We then tested for age differences and found that FriendlinessQ was lower and AggressivenessQ was higher in older individuals. Finally, we found that, among males, hierarchical rank was associated with higher AggressivenessQ . These findings contrast with findings in chimpanzees in ways consistent with known species differences. For one, consistent with the more egalitarian structure of bonobo society, we did not identify a clear Dominance factor. Also, the results related to sex differences were consistent with previous findings that reveal closer bonds between female bonobos than female chimpanzees. These findings highlight the importance of studying personality in closely related species and the need to consider species' socioecology when studying personality. Am. J. Primatol. 78:1178-1189, 2016. © 2016 Wiley Periodicals, Inc.

  17. Laparoscopic cholecystectomy and the Peter Pan syndrome.

    PubMed

    Orlando, G; Bellini, P; Borioni, R; Pace, A

    2000-08-01

    We report the case of a patient who experienced hemobilia a few weeks after undergoing laparoscopic cholecystectomy (LC). This condition was due to the rupture of a pseudo-aneurysm of the right hepatic artery in the common bile duct, probably caused by a clip erroneously fired during LC on the lateral right wall of the vessel. It also caused the formation of multiple liver abscesses and the onset of sepsis. This life-threatening complication led to melena, fever, epigastric pain, pancreatitis, liver dysfunction, and severe anemia, requiring urgent hospitalization and operation. In the operating theater, the fistula was closed, the liver abscesses drained, and a Kehr tube inserted. Thereafter, the patient's general condition improved, and she is now well. LC is often considered to be the gold standard for the management of symptomatic cholelithiasis. However, recent data have undermined that opinion. The apparent advantages offered by LC in the short term (less pain, speedier recovery, shorter hospital stay, and lower costs) have been overwhelmed by the complications that occur during long-term follow-up. When the late downward trend in the bile duct and the vascular injury rate are taken into consideration, the learning curve is prolonged. Therefore, LC should be regarded as the surgical equivalent of a modern Peter Pan-i.e., it is like a young adult who should make definitive steps toward becoming an adult but does not succeed in doing so. We report the case of a patient who experienced hemobilia a few weeks after undergoing laparoscopic cholecystectomy. Based on the facts in this case, we argue that the endoscopic procedure still needs to be perfected and cannot yet be considered the gold standard for selected cases of gallstone disease.

  18. PEP725 Pan European Phenological Database

    NASA Astrophysics Data System (ADS)

    Koch, Elisabeth; Adler, Silke; Ungersböck, Markus; Zach-Hermann, Susanne

    2010-05-01

    Europe is in the fortunate situation that it has a long tradition in phenological networking: the history of collecting phenological data and using them in climatology has its starting point in 1751 when Carl von Linné outlined in his work Philosophia Botanica methods for compiling annual plant calendars of leaf opening, flowering, fruiting and leaf fall together with climatological observations "so as to show how areas differ". The Societas Meteorologicae Palatinae at Mannheim well known for its first European wide meteorological network also established a phenological network which was active from 1781 to 1792. Recently in most European countries, phenological observations have been carried out routinely for more than 50 years by different governmental and non governmental organisations and following different observation guidelines, the data stored at different places in different formats. This has been really hampering pan European studies, as one has to address many National Observations Programs (NOP) to get access to the data before one can start to bring them in a uniform style. From 2004 to 2005 the COST-action 725 was running with the main objective to establish a European reference data set of phenological observations that can be used for climatological purposes, especially climate monitoring, and detection of changes. So far the common database/reference data set of COST725 comprises 7687248 data from 7285 observation sites in 15 countries and International Phenological Gardens (IPG) spanning the timeframe from 1951 to 2000. ZAMG is hosting the database. In January 2010 PEP725 has started and will take over not only the part of maintaining, updating the database, but also to bring in phenological data from the time before 1951, developing better quality checking procedures and ensuring an open access to the database. An attractive webpage will make phenology and climate impacts on vegetation more visible in the public enabling a monitoring of

  19. PEP725 Pan European Phenological Database

    NASA Astrophysics Data System (ADS)

    Koch, E.; Adler, S.; Lipa, W.; Ungersböck, M.; Zach-Hermann, S.

    2010-09-01

    Europe is in the fortunate situation that it has a long tradition in phenological networking: the history of collecting phenological data and using them in climatology has its starting point in 1751 when Carl von Linné outlined in his work Philosophia Botanica methods for compiling annual plant calendars of leaf opening, flowering, fruiting and leaf fall together with climatological observations "so as to show how areas differ". Recently in most European countries, phenological observations have been carried out routinely for more than 50 years by different governmental and non governmental organisations and following different observation guidelines, the data stored at different places in different formats. This has been really hampering pan European studies as one has to address many network operators to get access to the data before one can start to bring them in a uniform style. From 2004 to 2009 the COST-action 725 established a European wide data set of phenological observations. But the deliverables of this COST action was not only the common phenological database and common observation guidelines - COST725 helped to trigger a revival of some old networks and to establish new ones as for instance in Sweden. At the end of 2009 the COST action the database comprised about 8 million data in total from 15 European countries plus the data from the International Phenological Gardens IPG. In January 2010 PEP725 began its work as follow up project with funding from EUMETNET the network of European meteorological services and of ZAMG the Austrian national meteorological service. PEP725 not only will take over the part of maintaining, updating the COST725 database, but also to bring in phenological data from the time before 1951, developing better quality checking procedures and ensuring an open access to the database. An attractive webpage will make phenology and climate impacts on vegetation more visible in the public enabling a monitoring of vegetation development.

  20. PEP725 Pan European Phenological Database

    NASA Astrophysics Data System (ADS)

    Koch, E.; Lipa, W.; Ungersböck, M.; Zach-Hermann, S.

    2012-04-01

    PEP725 is a 5 years project with the main object to promote and facilitate phenological research by delivering a pan European phenological database with an open, unrestricted data access for science, research and education. PEP725 is funded by EUMETNET (the network of European meteorological services), ZAMG and the Austrian ministry for science & research bm:w_f. So far 16 European national meteorological services and 7 partners from different nati-onal phenological network operators have joined PEP725. The data access is very easy via web-access from the homepage www.pep725.eu. Ha-ving accepted the PEP725 data policy and registry the data download can be done by different criteria as for instance the selection of a specific plant or all data from one country. At present more than 300 000 new records are available in the PEP725 data-base coming from 31 European countries and from 8150 stations. For some more sta-tions (154) META data (location and data holder) are provided. Links to the network operators and data owners are also on the webpage in case you have more sophisticated questions about the data. Another objective of PEP725 is to bring together network-operators and scientists by organizing workshops. In April 2012 the second of these workshops will take place on the premises of ZAMG. Invited speakers will give presentations spanning the whole study area of phenology starting from observations to modelling. Quality checking is also a big issue. At the moment we study the literature to find ap-propriate methods.

  1. From evaporating pans to transpiring plants (John Dalton Medal Lecture)

    NASA Astrophysics Data System (ADS)

    Roderick, Michael

    2013-04-01

    The name of the original inventor of irrigated agriculture is lost to antiquity. Nevertheless, one can perhaps imagine an inquisitive desert inhabitant noting the greener vegetation along a watercourse and putting two and two together. Once water was being supplied and food was being produced it would be natural to ask a further question: how much water can we put on? No doubt much experience was gained down through the ages, but again, one can readily imagine someone inverting a rain gauge, filling it with water and measuring how fast the water evaporated. The inverted rain gauge measures the demand for water by the atmosphere. We call it the evaporative demand. I do not know if this is what actually happened but it sure makes an interesting start to a talk. Evaporation pans are basically inverted rain gauges. The rain gauge and evaporation pan measure the supply and demand respectively and these instruments are the workhorses of agricultural meteorology. Rain gauges are well known. Evaporation pans are lesser known but are in widespread use and are a key part of several national standardized meteorological networks. Many more pans are used for things like scheduling irrigation on farms or estimating evaporation from lakes. Analysis of the long records now available from standardized networks has revealed an interesting phenomenon, i.e., pan evaporation has increased in some places and decreased in other but when averaged over large numbers of pans there has been a steady decline. These independent reports from, for example, the US, Russia, China, India, Thailand, are replicated in the southern hemisphere in, for example, Australia, New Zealand and South Africa. One often hears the statement that because the earth is expected to warm with increasing greenhouse gas emissions then it follows that water will evaporate faster. The pan evaporation observations show that this widely held expectation is wrong. When expectations disagree with observations, it is the

  2. Overview of ATLAS PanDA Workload Management

    NASA Astrophysics Data System (ADS)

    Maeno, T.; De, K.; Wenaus, T.; Nilsson, P.; Stewart, G. A.; Walker, R.; Stradling, A.; Caballero, J.; Potekhin, M.; Smith, D.; ATLAS Collaboration

    2011-12-01

    The Production and Distributed Analysis System (PanDA) plays a key role in the ATLAS distributed computing infrastructure. All ATLAS Monte-Carlo simulation and data reprocessing jobs pass through the PanDA system. We will describe how PanDA manages job execution on the grid using dynamic resource estimation and data replication together with intelligent brokerage in order to meet the scaling and automation requirements of ATLAS distributed computing. PanDA is also the primary ATLAS system for processing user and group analysis jobs, bringing further requirements for quick, flexible adaptation to the rapidly evolving analysis use cases of the early datataking phase, in addition to the high reliability, robustness and usability needed to provide efficient and transparent utilization of the grid for analysis users. We will describe how PanDA meets ATLAS requirements, the evolution of the system in light of operational experience, how the system has performed during the first LHC data-taking phase and plans for the future.

  3. The ATLAS PanDA Monitoring System and its Evolution

    NASA Astrophysics Data System (ADS)

    Klimentov, A.; Nevski, P.; Potekhin, M.; Wenaus, T.

    2011-12-01

    The PanDA (Production and Distributed Analysis) Workload Management System is used for ATLAS distributed production and analysis worldwide. The needs of ATLAS global computing imposed challenging requirements on the design of PanDA in areas such as scalability, robustness, automation, diagnostics, and usability for both production shifters and analysis users. Through a system-wide job database, the PanDA monitor provides a comprehensive and coherent view of the system and job execution, from high level summaries to detailed drill-down job diagnostics. It is (like the rest of PanDA) an Apache-based Python application backed by Oracle. The presentation layer is HTML code generated on the fly in the Python application which is also responsible for managing database queries. However, this approach is lacking in user interface flexibility, simplicity of communication with external systems, and ease of maintenance. A decision was therefore made to migrate the PanDA monitor server to Django Web Application Framework and apply JSON/AJAX technology in the browser front end. This allows us to greatly reduce the amount of application code, separate data preparation from presentation, leverage open source for tools such as authentication and authorization mechanisms, and provide a richer and more dynamic user experience. We describe our approach, design and initial experience with the migration process.

  4. Can pan-allergens affect the sensitization pattern?

    PubMed

    Ciprandi, Giorgio; Comite, Paola; Bruzzone, Marco; Fontana, Vincenzo

    2017-01-28

    The present study tested the hypothesis that a pan-allergen sensitization may affect the sensitization pattern. For this reason, 22 sensitization pattern allergens (SPA), common in Genoa (Italy), were selected for analyses. Successively, five of them, such as Pru p 3 as representative for LTP family, Bet v 1 and Pru p 1 for PR-10, and Bet v 2 and Pru p 4 for Profilin, were used as target allergens (TA). This retrospective study included 1059 subjects, (396 males and 663 females, mean age 42.8 years). The current study showed that sensitization to a pan-allergen entails higher odds to have other sensitizations. In addition, the co-sensitization pattern depends on the basis of the sensitizing pan-allergen family. LTP-sensitization is strongly associated with peanut sensitization, PR10 and profiling sensitization with hazelnut positivity. This study shows that a pan-allergen sensitization is frequently associated with co-sensitizations and the sensitization pattern depends on the sensitizing pan-allergen.

  5. Overview of ATLAS PanDA Workload Management

    SciTech Connect

    Maeno T.; De K.; Wenaus T.; Nilsson P.; Stewart G. A.; Walker R.; Stradling A.; Caballero J.; Potekhin M.; Smith D.

    2011-01-01

    The Production and Distributed Analysis System (PanDA) plays a key role in the ATLAS distributed computing infrastructure. All ATLAS Monte-Carlo simulation and data reprocessing jobs pass through the PanDA system. We will describe how PanDA manages job execution on the grid using dynamic resource estimation and data replication together with intelligent brokerage in order to meet the scaling and automation requirements of ATLAS distributed computing. PanDA is also the primary ATLAS system for processing user and group analysis jobs, bringing further requirements for quick, flexible adaptation to the rapidly evolving analysis use cases of the early datataking phase, in addition to the high reliability, robustness and usability needed to provide efficient and transparent utilization of the grid for analysis users. We will describe how PanDA meets ATLAS requirements, the evolution of the system in light of operational experience, how the system has performed during the first LHC data-taking phase and plans for the future.

  6. Towards a holistic review of Pan-Africanism: linking the idea and the movement.

    PubMed

    Young, Kurt B

    2010-01-01

    This article explores two general approaches to defining Pan-Africanism. Traditional Pan-Africanism reflects definitions of Pan-Africanism that begin with the assumption that distinctions must be made between early "ideas" of group identification with Africa versus modern organizational activities. However, holistic approaches emphasize the interconnectivity of Pan-African ideas and concrete activities. This discussion explores these approaches and their implications for contemporary analyses of Pan-Africanism. The essay concludes that the holistic line is best suited for developing a new model in Pan-Africanism.

  7. Portion of Enhanced 360-degree Gallery Pan

    NASA Technical Reports Server (NTRS)

    1997-01-01

    This is a sub-section of the 'geometrically improved, color enhanced' version of the 360-degree panorama heretofore known as the 'Gallery Pan', the first contiguous, uniform panorama taken by the Imager for Mars Pathfinder (IMP) over the course of Sols 8, 9, and 10. Different regions were imaged at different times over the three Martian days to acquire consistent lighting and shadow conditions for all areas of the panorama.

    The IMP is a stereo imaging system that, in its fully deployed configuration, stands 1.8 meters above the Martian surface, and has a resolution of two millimeters at a range of two meters. In this geometrically improved version of the panorama, distortion due to a 2.5 degree tilt in the IMP camera mast has been removed, effectively flattening the horizon.

    The IMP has color capability provided by 24 selectable filters -- twelve filters per 'eye'. Its red, green, and blue filters were used to take this image. The color was digitally balanced according to the color transmittance capability of a high-resolution TV at the Jet Propulsion Laboratory (JPL), and is dependent on that device. In this color enhanced version of the panorama, detail in surface features are brought out via changes to saturation and intensity, holding the original hue constant. A threshold was applied to avoid changes to the sky.

    At left is a Lander petal and a metallic mast which is a portion of the low-gain antenna. Misregistration in the antenna and other Lander features is due to parallax in the extreme foreground. Another Lander petal is at the right, showing the fully deployed forward ramp.

    Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is a division of the California Institute of Technology (Caltech). The IMP was developed by the University

  8. Theoretical investigation on the bond dissociation enthalpies of phenolic compounds extracted from Artocarpus altilis using ONIOM(ROB3LYP/6-311++G(2df,2p):PM6) method

    NASA Astrophysics Data System (ADS)

    Thong, Nguyen Minh; Duong, Tran; Pham, Linh Thuy; Nam, Pham Cam

    2014-10-01

    Theoretical calculations have been performed to predict the antioxidant property of phenolic compounds extracted from Artocarpus altilis. The Osbnd H bond dissociation enthalpy (BDE), ionization energy (IE), and proton dissociation enthalpy (PDE) of the phenolic compounds have been computed. The ONIOM(ROB3LYP/6-311++G(2df,2p):PM6) method is able to provide reliable evaluation for the BDE(Osbnd H) in phenolic compounds. An important property of antioxidants is determined via the BDE(Osbnd H) of those compounds extracted from A. altilis. Based on the BDE(Osbnd H), compound 12 is considered as a potential antioxidant with the estimated BDE value of 77.3 kcal/mol in the gas phase.

  9. Project Pan-STARRS and the Outer Solar System

    NASA Astrophysics Data System (ADS)

    Jewitt, David

    2003-06-01

    Pan-STARRS, a funded project to repeatedly survey the entire visible sky to faint limiting magnitudes (mR ~ 24), will have a substantial impact on the study of the Kuiper Belt and outer solar system. We briefly review the Pan-STARRS design philosophy and sketch some of the planetary science areas in which we expect this facility to make its mark. Pan-STARRS will find ~20,000 Kuiper Belt Objects within the first year of operation and will obtain accurate astrometry for all of them on a weekly or faster cycle. We expect that it will revolutionise our knowledge of the contents and dynamical structure of the outer solar system.

  10. Bioenergy and Biodiversity: Key Lessons from the Pan American Region

    NASA Astrophysics Data System (ADS)

    Kline, Keith L.; Martinelli, Fernanda Silva; Mayer, Audrey L.; Medeiros, Rodrigo; Oliveira, Camila Ortolan F.; Sparovek, Gerd; Walter, Arnaldo; Venier, Lisa A.

    2015-12-01

    Understanding how large-scale bioenergy production can affect biodiversity and ecosystems is important if society is to meet current and future sustainable development goals. A variety of bioenergy production systems have been established within different contexts throughout the Pan American region, with wide-ranging results in terms of documented and projected effects on biodiversity and ecosystems. The Pan American region is home to the majority of commercial bioenergy production and therefore the region offers a broad set of experiences and insights on both conflicts and opportunities for biodiversity and bioenergy. This paper synthesizes lessons learned focusing on experiences in Canada, the United States, and Brazil regarding the conflicts that can arise between bioenergy production and ecological conservation, and benefits that can be derived when bioenergy policies promote planning and more sustainable land-management systems. We propose a research agenda to address priority information gaps that are relevant to biodiversity concerns and related policy challenges in the Pan American region.

  11. Bioenergy and Biodiversity: Key Lessons from the Pan American Region.

    PubMed

    Kline, Keith L; Martinelli, Fernanda Silva; Mayer, Audrey L; Medeiros, Rodrigo; Oliveira, Camila Ortolan F; Sparovek, Gerd; Walter, Arnaldo; Venier, Lisa A

    2015-12-01

    Understanding how large-scale bioenergy production can affect biodiversity and ecosystems is important if society is to meet current and future sustainable development goals. A variety of bioenergy production systems have been established within different contexts throughout the Pan American region, with wide-ranging results in terms of documented and projected effects on biodiversity and ecosystems. The Pan American region is home to the majority of commercial bioenergy production and therefore the region offers a broad set of experiences and insights on both conflicts and opportunities for biodiversity and bioenergy. This paper synthesizes lessons learned focusing on experiences in Canada, the United States, and Brazil regarding the conflicts that can arise between bioenergy production and ecological conservation, and benefits that can be derived when bioenergy policies promote planning and more sustainable land-management systems. We propose a research agenda to address priority information gaps that are relevant to biodiversity concerns and related policy challenges in the Pan American region.

  12. Structural Oil Pan With Integrated Oil Filtration And Cooling System

    DOEpatents

    Freese, V, Charles Edwin

    2000-05-09

    An oil pan for an internal combustion engine includes a body defining a reservoir for collecting engine coolant. The reservoir has a bottom and side walls extending upwardly from the bottom to present a flanged lip through which the oil pan may be mounted to the engine. An oil cooler assembly is housed within the body of the oil pan for cooling lubricant received from the engine. The body includes an oil inlet passage formed integrally therewith for receiving lubricant from the engine and delivering lubricant to the oil cooler. In addition, the body also includes an oil pick up passage formed integrally therewith for providing fluid communication between the reservoir and the engine through the flanged lip.

  13. PAN hollow fiber membranes elicit functional hippocampal neuronal network.

    PubMed

    Morelli, Sabrina; Piscioneri, Antonella; Salerno, Simona; Tasselli, Franco; Di Vito, Anna; Giusi, Giuseppina; Canonaco, Marcello; Drioli, Enrico; De Bartolo, Loredana

    2012-01-01

    This study focuses on the development of an advanced in vitro biohybrid culture model system based on the use of hollow fibre membranes (HFMs) and hippocampal neurons in order to promote the formation of a high density neuronal network. Polyacrylonitrile (PAN) and modified polyetheretherketone (PEEK-WC) membranes were prepared in hollow fibre configuration. The morphological and metabolic behaviour of hippocampal neurons cultured on PAN HF membranes were compared with those cultured on PEEK-WC HF. The differences of cell behaviour between HFMs were evidenced by the morphometric analysis in terms of axon length and also by the investigation of metabolic activity in terms of neurotrophin secretion. These findings suggested that PAN HFMs induced the in vitro reconstruction of very highly functional and complex neuronal networks. Thus, these biomaterials could potentially be used for the in vitro realization of a functional hippocampal tissue analogue for the study of neurobiological functions and/or neurodegenerative diseases.

  14. Building a pan-genome reference for a population.

    PubMed

    Nguyen, Ngan; Hickey, Glenn; Zerbino, Daniel R; Raney, Brian; Earl, Dent; Armstrong, Joel; Kent, W James; Haussler, David; Paten, Benedict

    2015-05-01

    A reference genome is a high quality individual genome that is used as a coordinate system for the genomes of a population, or genomes of closely related subspecies. Given a set of genomes partitioned by homology into alignment blocks we formalize the problem of ordering and orienting the blocks such that the resulting ordering maximally agrees with the underlying genomes' ordering and orientation, creating a pan-genome reference ordering. We show this problem is NP-hard, but also demonstrate, empirically and within simulations, the performance of heuristic algorithms based upon a cactus graph decomposition to find locally maximal solutions. We describe an extension of our Cactus software to create a pan-genome reference for whole genome alignments, and demonstrate how it can be used to create novel genome browser visualizations using human variation data as a test. In addition, we test the use of a pan-genome for describing variations and as a reference for read mapping.

  15. An electronic pan/tilt/zoom camera system

    NASA Technical Reports Server (NTRS)

    Zimmermann, Steve; Martin, H. L.

    1992-01-01

    A small camera system is described for remote viewing applications that employs fisheye optics and electronics processing for providing pan, tilt, zoom, and rotational movements. The fisheye lens is designed to give a complete hemispherical FOV with significant peripheral distortion that is corrected with high-speed electronic circuitry. Flexible control of the viewing requirements is provided by a programmable transformation processor so that pan/tilt/rotation/zoom functions can be accomplished without mechanical movements. Images are presented that were taken with a prototype system using a CCD camera, and 5 frames/sec can be acquired from a 180-deg FOV. The image-tranformation device can provide multiple images with different magnifications and pan/tilt/rotation sequences at frame rates compatible with conventional video devices. The system is of interest to the object tracking, surveillance, and viewing in constrained environments that would require the use of several cameras.

  16. Optimization of Pan Bread Prepared with Ramie Powder and Preservation of Optimized Pan Bread Treated by Gamma Irradiation during Storage

    PubMed Central

    Lee, Heejeong; Joo, Nami

    2012-01-01

    This study was conducted to develop an optimal composite recipe for pan bread with ramie powder that has high sensory approval with all age groups and to estimate the DPPH radical scavenging activity and the pan bread shelf life after gamma irradiation. The sensory evaluation results showed significant differences in flavor (p<0.05), appearance (p<0.01), color (p<0.01), moistness (p<0.01), and overall quality (p<0.05) based on the amount of ramie powder added. As a result, the optimum formulations by numerical and graphical methods were calculated to be as follows: ramie powder 2.76 g (0.92%) and water 184.7 mL. Optimized pan bread with ramie powder and white pan bread were irradiated with gamma-rays at doses of 0, 10, 15, and 20 kGy. The total bacterial growth increased with the longer storage time and the least amount of ramie powder added. Consequently, these results suggest that the addition of ramie powder to pan bread provides added value to the bread in terms of increased shelf life. PMID:24471063

  17. Evaluation of the tablets' surface flow velocities in pan coaters.

    PubMed

    Dreu, Rok; Toschkoff, Gregor; Funke, Adrian; Altmeyer, Andreas; Knop, Klaus; Khinast, Johannes; Kleinebudde, Peter

    2016-09-01

    The tablet pan coating process involves various types of transverse tablet bed motions, ranging from rolling to cascading. To preserve satisfactory results in terms of coating quality after scale-up, understanding the dynamics of pan coating process should be achieved. The aim of this study was to establish a methodology of estimating translational surface velocities of the tablets in a pan coater and to assess their dependence on the drum's filling degree, the pan speed, the presence of baffles and the selected tablet properties in a dry bed system and during coating while varying the drum's filling degree and the pan speed. Experiments were conducted on the laboratory scale and on the pilot scale in side-vented pan coaters. Surface movement of biconvex two-layer tablets was assessed before, during and after the process of active coating. In order to determine the tablets' surface flow velocities, a high-speed video of the tablet surface flow was recorded via a borescope inserted into the coating drum and analysed via a cross-correlation algorithm. The obtained tablet velocity data were arranged in a linear fashion as a function of the coating drum's radius and frequency. Velocity data obtained during coating were close to those of dry tablets after coating. The filling degree had little influence on the tablet velocity profile in a coating drum with baffles but clearly affected it in a coating drum without baffles. In most but not all cases, tablets with a lower static angle of repose had tablet velocity profiles with lower slopes than tablets with higher inter-tablet friction. This particular tablet velocity response can be explained by case specific values of tablet bed's dynamic angle of repose.

  18. The future of PanDA in ATLAS distributed computing

    NASA Astrophysics Data System (ADS)

    De, K.; Klimentov, A.; Maeno, T.; Nilsson, P.; Oleynik, D.; Panitkin, S.; Petrosyan, A.; Schovancova, J.; Vaniachine, A.; Wenaus, T.

    2015-12-01

    Experiments at the Large Hadron Collider (LHC) face unprecedented computing challenges. Heterogeneous resources are distributed worldwide at hundreds of sites, thousands of physicists analyse the data remotely, the volume of processed data is beyond the exabyte scale, while data processing requires more than a few billion hours of computing usage per year. The PanDA (Production and Distributed Analysis) system was developed to meet the scale and complexity of LHC distributed computing for the ATLAS experiment. In the process, the old batch job paradigm of locally managed computing in HEP was discarded in favour of a far more automated, flexible and scalable model. The success of PanDA in ATLAS is leading to widespread adoption and testing by other experiments. PanDA is the first exascale workload management system in HEP, already operating at more than a million computing jobs per day, and processing over an exabyte of data in 2013. There are many new challenges that PanDA will face in the near future, in addition to new challenges of scale, heterogeneity and increasing user base. PanDA will need to handle rapidly changing computing infrastructure, will require factorization of code for easier deployment, will need to incorporate additional information sources including network metrics in decision making, be able to control network circuits, handle dynamically sized workload processing, provide improved visualization, and face many other challenges. In this talk we will focus on the new features, planned or recently implemented, that are relevant to the next decade of distributed computing workload management using PanDA.

  19. The stable isotope ecology of Pan in Uganda and beyond.

    PubMed

    Loudon, James E; Sandberg, Paul A; Wrangham, Richard W; Fahey, Babette; Sponheimer, Matt

    2016-10-01

    Stable isotope analysis has long been used to study the dietary ecology of living and fossil primates, and there has been increasing interest in using stable isotopes to study primate habitat use and anthropogenic impacts on non-human primates. Here, we examine the stable carbon and nitrogen isotope compositions of chimpanzees (Pan troglodytes) from seven communities in Uganda across a continuum of habitat structure (closed to more open) and access to anthropogenic resources (no reliance to heavy reliance). In general, the hair δ(13) C, but not δ(15) N, values of these communities vary depending on forest structure and degree of anthropogenic influence. When integrated with previously published hair δ(13) C and δ(15) N values for Pan, it is apparent that modern "savanna" and "forest" Pan form discrete clusters in carbon and nitrogen isotope space, although there are exceptions probably relating to microhabitat specialization. The combined dataset also reveals that Pan δ(13) C values (but not δ(15) N values) are inversely related to rainfall (r(2)  = 0.62). We converted Pan hair δ(13) C values to enamel equivalents and made comparisons to the fossil hominoids Sivapithecus sp., Gigantopithecus blacki, Ardipithecus ramidus, and Australopithecus anamensis. The δ(13) C values of the fossil hominins Ar. ramidus and Au. anamensis do not cluster with the δ(13) C values of modern Pan in "forest" habitats, or with fossil hominoids that are believed to have inhabited forests. Am. J. Primatol. 78:1070-1085, 2016. © 2016 Wiley Periodicals, Inc.

  20. Calibration of the Pan-STARRS 3π Survey

    NASA Astrophysics Data System (ADS)

    Magnier, E.

    2007-04-01

    The Pan-STARRS project will begin a large-scale survey in early-2007 using the prototype telescope PS1 currently being commissioned on the summit of Haleakala. A major goal of this survey is to provide a calibration reference grid, the Pan-STARRS Astrometric & Photometric (AP) Reference Catalog, for eventual observations from the full Pan-STARRS 4 telescope system, which will perform a survey beginning in the 2009 timeframe. The precision requirements for internal relative photometry for this reference catalog are an ambitious 0.010 m for the riz filters, only slightly relaxed for the g and y filters. We have been working with the Canada-France-Hawaii Telescope (CFHT) Legacy Survey / MegaPrime photometric standards team to guide the design of the photometric calibration procedures and to assess the likely sources of systematic errors. The current photometry from the CFHT MegaPrime standard-star analysis demonstrates relative photometric residuals of better than 0.010 m, with systematic errors close to the Pan-STARRS goals. The Pan-STARRS 3π Survey will implement the lessons learned from CFHT and make use of additional external atmospheric transparency measurements, as well as an innovative flatfield screen, in an attempt to push the photometric accuracy below the 10 millimagnitude level. We discuss the plans for the Pan-STARRS PS1 Survey photometry calibration. The resulting photometric reference catalog will provide a highly accurate and dense reference system for future science observations in the entire 3π steradians north of declination -30.

  1. About rats and jackfruit trees: modeling the carrying capacity of a Brazilian Atlantic Forest spiny-rat Trinomys dimidiatus (Günther, 1877) - Rodentia, Echimyidae - population with varying jackfruit tree (Artocarpus heterophyllus L.) abundances.

    PubMed

    Mello, J H F; Moulton, T P; Raíces, D S L; Bergallo, H G

    2015-01-01

    We carried out a six-year study aimed at evaluating if and how a Brazilian Atlantic Forest small mammal community responded to the presence of the invasive exotic species Artocarpus heterophyllus, the jackfruit tree. In the surroundings of Vila Dois Rios, Ilha Grande, RJ, 18 grids were established, 10 where the jackfruit tree was present and eight were it was absent. Previous results indicated that the composition and abundance of this small mammal community were altered by the presence and density of A. heterophyllus. One observed effect was the increased population size of the spiny-rat Trinomys dimidiatus within the grids where the jackfruit trees were present. Therefore we decided to create a mathematical model for this species, based on the Verhulst-Pearl logistic equation. Our objectives were i) to calculate the carrying capacity K based on real data of the involved species and the environment; ii) propose and evaluate a mathematical model to estimate the population size of T. dimidiatus based on the monthly seed production of jackfruit tree, Artocarpus heterophyllus and iii) determinate the minimum jackfruit tree seed production to maintain at least two T. dimidiatus individuals in one study grid. Our results indicated that the predicted values by the model for the carrying capacity K were significantly correlated with real data. The best fit was found considering 20~35% energy transfer efficiency between trophic levels. Within the scope of assumed premises, our model showed itself to be an adequate simulator for Trinomys dimidiatus populations where the invasive jackfruit tree is present.

  2. Proton Conducting Polymer Electrolyte Based on Pva-Pan

    NASA Astrophysics Data System (ADS)

    Devi, S. Siva; Selvasekarapandian, S.; Rajeswari, N.; Genova, F. Kingslin Mary; Karthikeyan, S.; Raja, C. Sanjeevi

    2013-07-01

    Proton conducting polymer electrolytes based on blend polymer using Poly Vinyl Alcohol (PVA) and Poly Acrylo Nitrile (PAN) doped with ammonium nitrate have been prepared by solution casting method. The highest conductivity at room temperature (305K) has been found to be 1.8×10-3 S cm-1 for 15 mole % NH4NO3 doped PVA-PAN system. X ray Diffraction pattern of the doped and the undoped blend polymer electrolyte confirms the amorphous nature of blend polymer, when salt is added. The complex formation between the blend polymer and the salt has been confirmed by Fourier transform infrared spectroscopy.

  3. TCGA's Pan-Cancer Efforts and Expansion to Include Whole Genome Sequence - TCGA

    Cancer.gov

    Carolyn Hutter, Ph.D., Program Director of NHGRI's Division of Genomic Medicine, discusses the expansion of TCGA's Pan-Cancer efforts to include the Pan-Cancer Analysis of Whole Genomes (PAWG) project.

  4. Compilation of PRF Canyon Floor Pan Sample Analysis Results

    SciTech Connect

    Pool, Karl N.; Minette, Michael J.; Wahl, Jon H.; Greenwood, Lawrence R.; Coffey, Deborah S.; McNamara, Bruce K.; Bryan, Samuel A.; Scheele, Randall D.; Delegard, Calvin H.; Sinkov, Sergey I.; Soderquist, Chuck Z.; Fiskum, Sandra K.; Brown, Garrett N.; Clark, Richard A.

    2016-06-30

    On September 28, 2015, debris collected from the PRF (236-Z) canyon floor, Pan J, was observed to exhibit chemical reaction. The material had been transferred from the floor pan to a collection tray inside the canyon the previous Friday. Work in the canyon was stopped to allow Industrial Hygiene to perform monitoring of the material reaction. Canyon floor debris that had been sealed out was sequestered at the facility, a recovery plan was developed, and drum inspections were initiated to verify no additional reactions had occurred. On October 13, in-process drums containing other Pan J material were inspected and showed some indication of chemical reaction, limited to discoloration and degradation of inner plastic bags. All Pan J material was sealed back into the canyon and returned to collection trays. Based on the high airborne levels in the canyon during physical debris removal, ETGS (Encapsulation Technology Glycerin Solution) was used as a fogging/lock-down agent. On October 15, subject matter experts confirmed a reaction had occurred between nitrates (both Plutonium Nitrate and Aluminum Nitrate Nonahydrate (ANN) are present) in the Pan J material and the ETGS fixative used to lower airborne radioactivity levels during debris removal. Management stopped the use of fogging/lock-down agents containing glycerin on bulk materials, declared a Management Concern, and initiated the Potential Inadequacy in the Safety Analysis determination process. Additional drum inspections and laboratory analysis of both reacted and unreacted material are planned. This report compiles the results of many different sample analyses conducted by the Pacific Northwest National Laboratory on samples collected from the Plutonium Reclamation Facility (PRF) floor pans by the CH2MHill’s Plateau Remediation Company (CHPRC). Revision 1 added Appendix G that reports the results of the Gas Generation Rate and methodology. The scope of analyses requested by CHPRC includes the determination of

  5. Late Cardiac Events after Childhood Cancer: Methodological Aspects of the Pan-European Study PanCareSurFup

    PubMed Central

    Feijen, Elizabeth A. M.; Font-Gonzalez, Anna; van Dalen, Elvira C.; van der Pal, Helena J. H.; Reulen, Raoul C.; Winter, David L.; Kuehni, Claudia E.; Haupt, Riccardo; Alessi, Daniela; Byrne, Julianne; Bardi, Edit; Jakab, Zsuzsanna; Grabow, Desiree; Garwicz, Stanislaw; Jankovic, Momcilo; Levitt, Gill A.; Skinner, Roderick; Zadravec Zaletel, Lorna; Hjorth, Lars; Tissing, Wim J. E.; de Vathaire, Florent; Hawkins, Mike M.; Kremer, Leontien C. M.

    2016-01-01

    Background and Aim Childhood cancer survivors are at high risk of long-term adverse effects of cancer and its treatment, including cardiac events. The pan-European PanCareSurFup study determined the incidence and risk factors for cardiac events among childhood cancer survivors. The aim of this article is to describe the methodology of the cardiac cohort and nested case-control study within PanCareSurFup. Methods Eight data providers in Europe participating in PanCareSurFup identified and validated symptomatic cardiac events in their cohorts of childhood cancer survivors. Data on symptomatic heart failure, ischemia, pericarditis, valvular disease and arrhythmia were collected and graded according to the Criteria for Adverse Events. Detailed treatment data, data on potential confounders, lifestyle related risk factors and general health problems were collected. Results The PanCareSurFup cardiac cohort consisted of 59,915 5-year childhood cancer survivors with malignancies diagnosed between 1940 and 2009 and classified according to the International Classification of Childhood Cancer 3. Different strategies were used to identify cardiac events such as record linkage to population/ hospital or regional based databases, and patient- and general practitioner-based questionnaires. Conclusion The cardiac study of the European collaborative research project PanCareSurFup will provide the largest cohort of 5-year childhood cancer survivors with systematically ascertained and validated data on symptomatic cardiac events. The result of this study can provide information to minimize the burden of cardiac events in childhood cancer survivors by tailoring the follow-up of childhood cancer survivors at high risk of cardiac adverse events, transferring this knowledge into evidence-based clinical practice guidelines and providing a platform for future research studies in childhood cancer patients.  PMID:27643694

  6. Pan-Eurasian experiment (PEEX) establishing a process towards high level Pan-Eurasian atmosphere-ecosystem observation networks

    NASA Astrophysics Data System (ADS)

    Lappalainen, Hanna K.; Petäjä, Tuukka; Zaytzeva, Nina; Viisanen, Yrjö; Kotlyakov, Vladimir; Kasimov, Nikolay; Bondur, Valery; Matvienko, Gennady; Zilitinkevich, Sergej; Kulmala, Markku

    2014-05-01

    Pan-Eurasian Experiment (PEEX) is a new multidisciplinary research approach aiming at resolving the major uncertainties in the Earth system science and global sustainability questions in the Arctic and boreal Pan-Eurasian regions (Kulmala et al. 2011). The main goal of PEEX Research agenda is to contribute to solving the scientific questions that are specifically important for the Pan-Eurasian region in the coming years, in particular the global climate change and its consequences to nature and human society. Pan Eurasian region represents one the Earth most extensive areas of boreal forest (taiga) and the largest natural wetlands, thus being a significant source area of trace gas emissions, biogenic aerosol particles, and source and sink area for the greenhouse gas (GHG) exchange in a global scale (Guenther et al. 1995, Timkovsky et al. 2010, Tunved et al. 2006, Glagolev et al. 2010). One of the first activities of the PEEX initiative is to establish a process towards high level Pan-Eurasian Observation Networks. Siberian region is currently lacking a coordinated, coherent ground based atmosphere-ecosystem measurement network, which would be crucial component for observing and predicting the effects of climate change in the Northern Pan- Eurasian region The vision of the Pan-Eurasion network will be based on a hierarchical SMEAR-type (Stations Measuring Atmosphere-Ecosystem Interactions) integrated land-atmosphere observation system (Hari et al. 2009). A suite of stations have been selected for the Preliminary Phase of PEEX Observation network. These Preliminary Phase stations includes the SMEAR-type stations in Finland (SMEAR-I-II-II-IV stations), in Estonia (SMEAR-Järviselja) and in China (SMEAR-Nanjing) and selected stations in Russia and ecosystem station network in China. PEEX observation network will fill in the current observational gap in the Siberian region and bring the Siberian observation setup into international context with the with standardized or

  7. Sampling bee communities using pan traps: alternative methods increase sample size

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Monitoring of the status of bee populations and inventories of bee faunas require systematic sampling. Efficiency and ease of implementation has encouraged the use of pan traps to sample bees. Efforts to find an optimal standardized sampling method for pan traps have focused on pan trap color. Th...

  8. 75 FR 8919 - Federal Consistency Appeal by Pan American Grain Co.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-26

    ... National Oceanic and Atmospheric Administration Federal Consistency Appeal by Pan American Grain Co. AGENCY.... SUMMARY: This announcement provides notice that Pan American Grain Co., has filed an administrative appeal...@noaa.gov . SUPPLEMENTARY INFORMATION: I. Notice of Appeal On January 27, 2010, Pan American Grain...

  9. 75 FR 61698 - Federal Consistency Appeal by Pan American Grain Co.

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-06

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF COMMERCE National Oceanic and Atmospheric Administration Federal Consistency Appeal by Pan American Grain Co. AGENCY... administrative appeal filed with the Secretary of Commerce (Secretary) by Pan American Grain Co. (Pan...

  10. Computational pan-genomics: status, promises and challenges.

    PubMed

    2016-10-21

    Many disciplines, from human genetics and oncology to plant breeding, microbiology and virology, commonly face the challenge of analyzing rapidly increasing numbers of genomes. In case of Homo sapiens, the number of sequenced genomes will approach hundreds of thousands in the next few years. Simply scaling up established bioinformatics pipelines will not be sufficient for leveraging the full potential of such rich genomic data sets. Instead, novel, qualitatively different computational methods and paradigms are needed. We will witness the rapid extension of computational pan-genomics, a new sub-area of research in computational biology. In this article, we generalize existing definitions and understand a pan-genome as any collection of genomic sequences to be analyzed jointly or to be used as a reference. We examine already available approaches to construct and use pan-genomes, discuss the potential benefits of future technologies and methodologies and review open challenges from the vantage point of the above-mentioned biological disciplines. As a prominent example for a computational paradigm shift, we particularly highlight the transition from the representation of reference genomes as strings to representations as graphs. We outline how this and other challenges from different application domains translate into common computational problems, point out relevant bioinformatics techniques and identify open problems in computer science. With this review, we aim to increase awareness that a joint approach to computational pan-genomics can help address many of the problems currently faced in various domains.

  11. The nature, distribution and formation of pans in arid zones

    NASA Astrophysics Data System (ADS)

    Goudie, A. S.; Wells, G. L.

    1995-03-01

    Pans, closed depressions, are a widespread feature of many of the world's drylands. By using literature survey, air photographs, topographic maps, orbital photographs and imagery, combined with field work it is possible to describe the major areas where these features occur. Their distribution is controlled to a great extent by the availability of susceptible surfaces. They also develop in certain particular environmental settings: palaeolacustrine basins, palaeodrainages, interdunes, and on coastal plains. Many of the pans have a distinctive morphology while on their lee sides they may have lunette dunes. Many processes combine to create and maintain pans, and these can be considered in a general model which has certain key elements. The first of these is that the area should not be one where fluvial processes are fully integrated. It should also not be one where aeolian accumulation is such as to infill any irregularities in the land's surface. If these two predisposing conditions are fulfilled then under dryland conditions, if susceptible surfaces are present, there are various circumstances that may lead to hollow development and enlargement. Although in some cases such processes as solution, suffosion and animal activities may play a role, we believe that the predominant reason why pans have the characteristics that they do (including their shapes, lunettes, alignments, etc.) is that they result from the operation of the twin processes of salt weathering and aeolian deflation.

  12. Pan-sharpening based on geometric clustered neighbor embedding

    NASA Astrophysics Data System (ADS)

    Liu, Qingjie; Wang, Yunhong; Zhang, Zhaoxiang

    2014-09-01

    Utilizing an implicit nonparametric learning framework, a neighbor-embedding-based method is proposed to solve the remote-sensing pan-sharpening problem. First, the original high-resolution (HR) and downsampled panchromatic (Pan) images are used to train the high/low-resolution (LR) patch pair dictionaries. Based on the perspective of locally linear embedding, patches in LR and HR images form manifolds with similar local intrinsic structure in the corresponding feature space. Every patch in each multispectral (MS) image band is modeled by its K nearest neighbors in the patch set generated from the LR Pan image, and this model can be generalized to the HR condition. Then, the desired HR MS patch is reconstructed from the corresponding neighbors in the HR Pan patch set. Finally, HR MS images are recovered by stitching these patches together. Recognizing that the K nearest neighbors should have local geometric structures similar to the input query patch based on clustering, we employ a dominant orientation algorithm to perform such clustering. The K nearest neighbors of each input LR MS patch are adaptively chosen from the associate subdictionary. Four datasets of images acquired by QuickBird and IKONOS satellites are used to test the performance of the proposed method. Experimental results show that the proposed method performs well in preserving spectral information as well as spatial details.

  13. 24. Roof detail from liftbed truck, showing pan roof above ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    24. Roof detail from lift-bed truck, showing pan roof above breezeway, with sawn redwood trim, tube-type drains; note missing rain gutter at roof edge, deteriorated condition of slates; view to south, 90mm lens. - Southern Pacific Depot, 559 El Camino Real, San Carlos, San Mateo County, CA

  14. Maya Education and Pan Maya Ideology in the Yucatan.

    ERIC Educational Resources Information Center

    Burns, Allan

    1998-01-01

    A University of Yucatan (Mexico) professor who taught a Mayan linguistics course to indigenous teachers in Mayan discusses three issues that are central to understanding how indigenous education interacts with pan-Maya identity: the importance of locally developed Maya literature, the symbols used to define Maya culture, and a conflict over Maya…

  15. Characterization of low thermal conductivity PAN-based carbon fibers

    NASA Technical Reports Server (NTRS)

    Katzman, Howard A.; Adams, P. M.; Le, T. D.; Hemminger, Carl S.

    1992-01-01

    The microstructure and surface chemistry of eight low thermal conductivity (LTC) PAN-based carbon fibers were determined and compared with PAN-based fibers heat treated to higher temperatures. Based on wide-angle x ray diffraction, the LTC PAN fibers all appear to have a similar turbostratic structure with large 002 d-spacings, small crystallite sizes, and moderate preferred orientation. Limited small-angle x ray scattering (SAXS) results indicate that, with the exception of LTC fibers made by BASF, the LTC fibers do not have well developed pores. Transmission electron microscopy shows that the texture of the two LTC PAN-based fibers studied (Amoco T350/23X and /25X) consists of multiple sets of parallel, wavy, bent layers that interweave with each other forming a complex three dimensional network oriented randomly around the fiber axis. X ray photoelectron spectroscopy (XPS) analysis finds correlations between heat treated temperatures and the surface composition chemistry of the carbon fiber samples.

  16. Isotopic composition of atmospheric moisture from pan water evaporation measurements.

    PubMed

    Devi, Pooja; Jain, Ashok Kumar; Rao, M Someshwer; Kumar, Bhishm

    2015-01-01

    A continuous and reliable time series data of the stable isotopic composition of atmospheric moisture is an important requirement for the wider applicability of isotope mass balance methods in atmospheric and water balance studies. This requires routine sampling of atmospheric moisture by an appropriate technique and analysis of moisture for its isotopic composition. We have, therefore, used a much simpler method based on an isotope mass balance approach to derive the isotopic composition of atmospheric moisture using a class-A drying evaporation pan. We have carried out the study by collecting water samples from a class-A drying evaporation pan and also by collecting atmospheric moisture using the cryogenic trap method at the National Institute of Hydrology, Roorkee, India, during a pre-monsoon period. We compared the isotopic composition of atmospheric moisture obtained by using the class-A drying evaporation pan method with the cryogenic trap method. The results obtained from the evaporation pan water compare well with the cryogenic based method. Thus, the study establishes a cost-effective means of maintaining time series data of the isotopic composition of atmospheric moisture at meteorological observatories. The conclusions drawn in the present study are based on experiments conducted at Roorkee, India, and may be examined at other regions for its general applicability.

  17. Capillary gas chromatographic analysis of pans with luminol chemilumnescent detection

    SciTech Connect

    Gaffney, J.; Bornick, R.; Chen, Yu-Harn; Marley, N.

    1996-12-31

    Peroxyacyl nitrates (PANs) are important air pollutants in tropospheric chemistry. PANs are known to be potent phytotoxins at low ppb concentrations and are lachrymators. They can also transport the more reactive nitrogen dioxide long distances, because they are in equilibrium with that NO{sub x} species. Since PANs are trapped peroxyradicals, they are a direct measure of the peroxyradical levels and the of {open_quotes}photochemical age{close_quotes} of an air parcel. The PANs are typically measured in the atmosphere by using electron capture detection methods. These methods suffer from large background signals and detector responses to oxygen and water vapor. This paper describes the combination of a capillary gas chromatographic column with a modified luminol chemiluminescent nitrogen dioxide detector (Scintrex, Luminox) for rapid and sensitive detection of nitrogen dioxide, peroxyacetyl nitrate, peroxypropionyl nitrate, and peroxybutyryl nitrate. Detection limits for this approach in the low tens of parts per trillion have been observed with total analysis times of less than three minutes. We will discuss the potential application of this method to other compounds, particularly, organonitrates, in a pyrolysis system and/or with ozone addition to the sampling streams.

  18. Can Chimpanzees ("Pan troglodytes") Discriminate Appearance from Reality?

    ERIC Educational Resources Information Center

    Krachun, Carla; Call, Josep; Tomasello, Michael

    2009-01-01

    A milestone in human development is coming to recognize that how something looks is not necessarily how it is. We tested appearance-reality understanding in chimpanzees ("Pan troglodytes") with a task requiring them to choose between a small grape and a big grape. The apparent relative size of the grapes was reversed using magnifying and…

  19. A case of maxillary sarcoma in a chimpanzee (Pan troglodytes).

    PubMed

    Fujisawa, M; Udono, T; Nogami, E; Hirosawa, M; Morimura, N; Saito, A; Seres, M; Teramoto, M; Nagano, K; Mori, Y; Uesaka, H; Nasu, K; Tomonaga, M; Idani, G; Hirata, S; Tsuruyama, T; Matsubayashi, K

    2014-04-01

    Oral malignancy is rare in chimpanzees. A 34-year-old female chimpanzee (Pan troglodytes) at Kumamoto Sanctuary, Japan, had developed it. Treatment is technically difficult for chimpanzees while malignant neoplasm is seemingly rising in captive populations. Widespread expert discussion, guidelines for treatment, especially for great apes in terminal stages is urgently needed.

  20. Scale-up of a pan-coating process.

    PubMed

    Pandey, Preetanshu; Turton, Richard; Joshi, Nitin; Hammerman, Elizabeth; Ergun, James

    2006-01-01

    The purpose of this work was to develop a practical scale-up model for a solvent-based pan-coating process. Practical scale-up rules to determine the key parameters (pan load, pan speed, spray rate, air flow) required to control the process are proposed. The proposed scale-up rules are based on a macroscopic evaluation of the coating process. Implementation of these rules does not require complex experimentation or prediction of model parameters. The proposed scale-up rules were tested by conducting coating scale-up and scale-down experiments on 24-inch and 52-inch Vector Hi-coaters. The data demonstrate that using these rules led to similar cumulative drug release profiles (f2 > 50; and P Analysis of Variance [PANOVA] > 0.05 for cumulative percentage of drug released after 12 hours [Cum12]) from tablets made at 24- and 52-inch scales. Membrane characteristics such as opacity and roughness were also similar across the 2 scales. The effects of the key process variables on coat weight uniformity and membrane characteristics were also studied. Pan speed was found to be the most significant factor related to coating uniformity. Spray droplet size was found to affect the membrane roughness significantly, whereas opacity was affected by the drying capacity.

  1. Vaccination to conserved influenza antigens in mice using a novel Simian adenovirus vector, PanAd3, derived from the bonobo Pan paniscus.

    PubMed

    Vitelli, Alessandra; Quirion, Mary R; Lo, Chia-Yun; Misplon, Julia A; Grabowska, Agnieszka K; Pierantoni, Angiolo; Ammendola, Virginia; Price, Graeme E; Soboleski, Mark R; Cortese, Riccardo; Colloca, Stefano; Nicosia, Alfredo; Epstein, Suzanne L

    2013-01-01

    Among approximately 1000 adenoviruses from chimpanzees and bonobos studied recently, the Pan Adenovirus type 3 (PanAd3, isolated from a bonobo, Pan paniscus) has one of the best profiles for a vaccine vector, combining potent transgene immunogenicity with minimal pre-existing immunity in the human population. In this study, we inserted into a replication defective PanAd3 a transgene expressing a fusion protein of conserved influenza antigens nucleoprotein (NP) and matrix 1 (M1). We then studied antibody and T cell responses as well as protection from challenge infection in a mouse model. A single intranasal administration of PanAd3-NPM1 vaccine induced strong antibody and T cell responses, and protected against high dose lethal influenza virus challenge. Thus PanAd3 is a promising candidate vector for vaccines, including universal influenza vaccines.

  2. An Intercomparison of Airborne VOC and PAN Measurements

    NASA Astrophysics Data System (ADS)

    Hansel, A.; Wisthaler, A.; Flocke, F.; Weinheimer, A.; Fall, R.; Goldan, P.; Hübler, G.; Fehsenfeld, F. C.

    2002-12-01

    As part of the Texas Air Quality Study (TexAQS 2000) an informal airborne intercomparison has been conducted to evaluate the state-of-the-art of fast-response, in-situ methods for analyzing Volatile Organic Compounds (VOCs) and peroxyacetyl nitrate (PAN). Instrumentation included a Proton-Transfer-Reaction Mass Spectrometer (PTR-MS), the Tropospheric Airborne Chromatograph for Oxy-hydrocarbons and Hydrocarbons (TACOH) and a gas chromatograph for PAN detection using electron capture (GC/ECD). The measurements were made in the Greater Houston area and East Texas in August/September 2000 during 13 flights with the NSF/NCAR ELECTRA aircraft. The intercomparison was conducted mainly in the boundary layer but included some encounters with air masses from the free troposphere. Final results from the intercomparison show that measurements of acetaldehyde, isoprene, the sum\\textsuperscript{*} of acetone and propanal, the sum\\textsuperscript{*} methyl vinyl ketone and methacrolein (\\textsuperscript{*} PTR-MS does not distinguish between isobaric species) and toluene agree very well. Poor agreement was achieved in the case of methanol and the underlying sensitivity problem in the PTR-MS or TACOH system is under investigation. The results of the PAN intercomparison indicate that the PTR-MS technique suffered from an interference most likely associated with the presence of peracetic acid in photochemically aged air. If this interfering signal was traced by periodically inserting a selective PAN scrubber (thermal decomposition) into the sample air stream and subtracted from the original signal, the corrected PTR-MS PAN data are in very good agreement with the GC/ECD results.

  3. 3 CFR 8361 - Proclamation 8361 of April 14, 2009. Pan American Day and Pan American Week, 2009

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... supports strong democracies and the development of alternative energy sources. The promotion of transparent... alternative energy sources, and the Pan American community must build upon these promising efforts. As we..., strong democratic governance, and clean energy. Robust, bottom-up economic growth benefits all...

  4. Adsorption Isotherms for Xenon and Krypton using INL HZ-PAN and AgZ-PAN Sorbents

    SciTech Connect

    Garn, Troy G.; Greenhalgh, Mitchell; Rutledge, Veronica J.; Law, Jack D.

    2014-08-01

    The generation of adsorption isotherms compliments the scale-up of off-gas processes used to control the emission of encapsulated radioactive volatile fission and activation products released during Used Nuclear Fuel (UNF) reprocessing activities. A series of experiments were conducted to obtain capacity results for varying Kr and Xe gas concentrations using HZ-PAN and AgZ-PAN engineered form sorbents. Gas compositions for Kr ranged from 150-40,000 ppmv and 250-5020 ppmv for Xe in a helium balance. The experiments were all performed at 220 K at a flowrate of 50 sccm. Acquired capacities were then respectively fit to the Langmuir equation using the Langmuir linear regression method to obtain the equilibrium parameters Qmax and Keq. Generated experimental adsorption isotherms were then plotted with the Langmuir predicted isotherms to illustrate agreement between the two. The Langmuir parameters were provided for input into the OSPREY model to predict breakthrough of single component adsorption of Kr and Xe on HZ-PAN and AgZ-PAN sorbents at the experimental conditions tested. Kr and Xe capacities resulting from model breakthrough predictions were then compared to experimental capacities for model validation.

  5. Metallurgical and acoustical characterization of a hydroformed, 304 stainless steel, Caribbean-style musical pan

    SciTech Connect

    Murr, L.E. Gaytan, S.M.; Lopez, M.I.; Bujanda, D.E.; Martinez, E.Y.; Whitmyre, G.; Price, H.

    2008-03-15

    We report herein the metallurgical and acoustical characterization of hydroformed 304 stainless steel, Caribbean pans. These pans were fully tuned to chromatic tones and compared to a manufactured, low-carbon, Caribbean steel pan standard. Hydroformed platforms had a Vickers microindentation hardness of HV 345, which was reduced by annealing during pan fabrication to HV 270. Skirts welded to the hydroformed head had a microindentation hardness of HV 440. Microstructural characterization by light optical metallography and transmission electron microscopy illustrated microstructures (including grain structures) characteristic of these pan microindentation hardnesses.

  6. Changes in flavor volatile composition of oolong tea after panning during tea processing.

    PubMed

    Sheibani, Ershad; Duncan, Susan E; Kuhn, David D; Dietrich, Andrea M; Newkirk, Jordan J; O'Keefe, Sean F

    2016-05-01

    Panning is a processing step used in manufacturing of some varieties of oolong tea. There is limited information available on effects of panning on oolong tea flavors. The goal of this study was to determine effects of panning on flavor volatile compositions of oolong using Gas Chromatography-Mass Spectrometry (GC-MS) and Gas Chromatography-Olfactometry (GC-O). SDE and SPME techniques were applied for extraction of volatiles in panned and unpanned teas. A total of 190 volatiles were identified from SDE and SPME extractions using GC-MS and GC-O. There were no significant differences (P > 0.05) in aldehyde or terpene contents of unpanned and panned tea. However, alcohols, ketones, acids and esters contents were significantly reduced by panning. Among 12 major volatiles previously used for identification and quality assessment of oolong tea, trans nerolidol, 2- hexenal, benzaldehyde, indole, gernaiol, and benzenacetaldehyde contents were significantly decreased (P < 0.05) by panning. Panning increased (P < 0.05) contents of linalool oxide, cis jasmone, and methyl salicylate. The GC-O study also showed an increase of aroma active compounds with sweet descriptions and decrease of aroma active compounds with fruity and smoky descriptions after panning. Panning significantly changes the volatile compositions of the tea and created new aroma active compounds. Results from this study can be used in quality assessment of panned oolong tea.

  7. The Pan-STARRS1 Survey Data Release

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.; Pan-STARRS Team

    2017-01-01

    The first Pan-STARRS1 Science Mission is complete and an initial Data Release 1, or DR1, including a database of measured attributes, stacked images, and metadata of the 3PI Survey, will be available from the STScI MAST archive. This release will contain all stationary objects with mean and stack photometry registered on the GAIA astrometric frame.The characteristics of the Pan-STARRS1 Surveys will be presented, including image quality, depth, cadence, and coverage. Measured attributes include PSF model magnitudes, aperture magnitudes, Kron Magnitudes, radial moments, Petrosian magnitudes, DeVaucoulers, Exponential, and Sersic magnitudes for extended objects. Images include total intensity, variance, and masks.An overview of both DR1 and the second data release DR2, to follow in the spring of 2017, will be presented. DR2 will add all time domain data and individual warped images. We will also report on the status of the Pan-STARRS2 Observatory and ongoing science with Pan-STARRS. The science from the PS1 surveys has included results in many t fields of astronomy from Near Earth Objects to cosmology.The Pan-STARRS1 Surveys have been made possible through contributions of the Institute for Astronomy of the University of Hawaii; the Pan-STARRS Project Office; the Max-Planck Society and its participating institutes: the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching; The Johns Hopkins University; Durham University; the University of Edinburgh; Queen's University Belfast; the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated; the National Central University of Taiwan; the Space Telescope Science Institute; the National Aeronautics and Space Administration under Grants No. NNX08AR22G, NNX12AR65G, NNX14AM74G issued through the Planetary Science Division of the NASA Science Mission Directorate; the National Science Foundation under Grant No. AST

  8. PanDaTox: A tool for accelerated metabolic engineering

    SciTech Connect

    Amitai, Gil; Sorek, Rotem

    2012-07-18

    Metabolic engineering is often facilitated by cloning of genes encoding enzymes from various heterologous organisms into E. coli. Such engineering efforts are frequently hampered by foreign genes that are toxic to the E. coli host. We have developed PanDaTox (www.weizmann.ac.il/pandatox), a web-based resource that provides experimental toxicity information for more than 1.5 million genes from hundreds of different microbial genomes. The toxicity predictions, which were extensively experimentally verified, are based on serial cloning of genes into E. coli as part of the Sanger whole genome shotgun sequencing process. PanDaTox can accelerate metabolic engineering projects by allowing researchers to exclude toxic genes from the engineering plan and verify the clonability of selected genes before the actual metabolic engineering experiments are conducted.

  9. The Equatorial Ridges of Pan and Atlas: Terminal Accretionary Ornaments?

    NASA Astrophysics Data System (ADS)

    Charnoz, Sébastien; Brahic, André; Thomas, Peter C.; Porco, Carolyn C.

    2007-12-01

    In the outer regions of Saturn’s main rings, strong tidal forces balance gravitational accretion processes. Thus, unusual phenomena may be expected there. The Cassini spacecraft has recently revealed the strange “flying saucer” shape of two small satellites, Pan and Atlas, located in this region, showing prominent equatorial ridges. The accretion of ring particles onto the equatorial surfaces of already-formed bodies embedded in the rings may explain the formation of the ridges. This ridge formation process is in good agreement with detailed Cassini images showing differences between rough polar and smooth equatorial terrains. We propose that Pan and Atlas ridges are kilometers-thick “ring-particle piles” formed after the satellites themselves and after the flattening of the rings but before the complete depletion of ring material from their surroundings.

  10. Dynamic heat and moisture transfer in bulky PAN nanofiber mats

    NASA Astrophysics Data System (ADS)

    Borhani, Sedigheh; Etemad, Seyed Gholamreza; Ravandi, Seyed Abdolkarim Hosseini

    2011-07-01

    In this study a non-conventional electrospinning technique was designed for the production of high bulky polyacrylonitrile (PAN) nanofiber mats. Optimum nanofiber mats are achieved with 15 wt.% solution of PAN in dimethylformamide. Such mats result in a bulk porosity which is as high as 99.9 and a density as low as 0.84 × 10-3 g/cm3. The effect of the porosity of nanofiber mats on the air permeability and coupled heat and moisture transfer of fibers was investigated. Based on the results, high bulky nanofiber mats possess high heat and moisture transfer. Experimental data reveal that upon a slight decrease in the bulk porosity, air permeability and heat transfer decrease noticeably, while moisture transfer variation is low.

  11. On the working conditions of a two-pan balance

    NASA Astrophysics Data System (ADS)

    de Carvalho, Carlos R.

    2016-07-01

    In this article we address the assumptions concerning the equilibrium of rigid bodies, commonly used in textbooks, that can lead to completely wrong conclusions. In particular, we show that in an idealised world, where frictions and deformations don’t occur, a steelyard or two-pan balance would not work. This apparent contradiction, that one needs imperfections to make things work, doesn’t appear in textbooks because the corresponding topics are presented in the equilibrium configuration, where the imperfections’ role is no longer necessary. At the end, taking the two-pan balance as example, we show that to avoid of working with imperfections, one must deal with a device whose design has a subtle difference from that one we are used to think about.

  12. Lithium Ion Polymer Electrolyte Based on Pva-Pan

    NASA Astrophysics Data System (ADS)

    Genova, F. Kingslin Mary; Selvasekarapandian, S.; Rajeswari, N.; Devi, S. Siva; Karthikeyan, S.; Raja, C. Sanjeevi

    2013-07-01

    The polymer blend electrolytes based on polyvinylalcohol(PVA) and polyacrylonitrile (PAN) doped with lithium per chlorate (LiClO4) have been prepared by solution casting technique using DMF as solvent. The complex formation between blend polymer and the salt has been confirmed by Fourier transform infrared spectroscopy. The amorphous nature of the blend polymer electrolyte has been confirmed by X-ray diffraction analysis. The ionic conductivity of the prepared blend polymer electrolyte has been found by ac impedence spectroscopic analysis. The highest ionic conductivity has been found to be 5.0 X10-4 S cm -1 at room temperature for 92.5 PVA: 7.5PAN: 20 molecular wt. % of LiClO4. The effect of salt concentration on the conductivity of the blend polymer electrolyte has been discussed.

  13. Prevalence of dental trauma in Pan American games athletes.

    PubMed

    Andrade, Rafaela Amarante; Evans, Patricia Louise Scabell; Almeida, Anne Louise Scabell; da Silva, Juliana de Jesus Rodrigues; Guedes, Aurelino Machado Lima; Guedes, Fábio Ribeiro; Ranalli, Dennis N; Modesto, Adriana; Tinoco, Eduardo Muniz Barretto

    2010-06-01

    The aim of this cross-sectional epidemiological survey was to assess the prevalence of dental trauma in athletes representing 42 countries competing at the most recent Pan American Games (XV Pan Am) held in Rio de Janeiro, Brazil in July of 2007, and to determine prior use and type of mouthguard among this group of athletes. The examiners participated in standardization and calibration training sessions before the field phase began. Invitations were sent to >5500 participating athletes competing in 41 sports and to the Medical Committee of the Pan American Sports Organization before and during the XV PAN. A convenience sample of 409 athletes was recruited. After signing an informed consent, all athletes answered a questionnaire. Data were collected at the clinical examination and recorded on a specific trauma form. The mean age of the athletes was 24.4 +/- 5.3 years. Males comprised 55% of the sample; females 45%. The prevalence of dental trauma among the athletes was 49.6% (n = 203) with no gender-based differences. Most of these injuries (63.6%) were related to activities during training or competition. Sports with the highest injury prevalence were wrestling (83.3%), boxing (73.7%), basketball (70.6%) and karate (60%). The most common injury was enamel fracture (39.8%); root fracture was the least common (0.4%). The teeth most affected were the maxillary permanent central incisors (n = 113), followed by the mandibular central incisors (n = 19). Based on the results of this study, nearly one-half of the subjects had experienced previous dental trauma; the majority related to sports activities. Furthermore, only 17% of the athletes reported prior mouthguard use; the most frequent mouthguards reported were boil-and-bite. These results suggest the importance of enhanced educational efforts and the use of properly fitted mouthguards to reduce dental trauma among athletes in international sports competition, especially in sports where mouthguards are not mandatory.

  14. Cryoconite pans on Snowball Earth: supraglacial oases for Cryogenian eukaryotes?

    PubMed

    Hoffman, P F

    2016-11-01

    Geochemical, paleomagnetic, and geochronological data increasingly support the Snowball Earth hypothesis for Cryogenian glaciations. Yet, the fossil record reveals no clear-cut evolutionary bottleneck. Climate models and the modern cryobiosphere offer insights on this paradox. Recent modeling implies that Snowball continents never lacked ice-free areas. Wind-blown dust from these areas plus volcanic ash were trapped by snow on ice sheets and sea ice. At a Snowball onset, sea ice was too thin to flow and ablative ice was too cold for dust retention. After a few millenia, sea ice reached 100 s of meters in thickness and began to flow as a 'sea glacier' toward an equatorial ablation zone. At first, dust advected to the ablative surface was recycled by winds, but as the surface warmed with rising CO2 , dust aka cryoconite began to accumulate. As a sea glacier has no terminus, cryoconite saturated the surface. It absorbed solar radiation, supported cyanobacterial growth, and sank to an equilibrium depth forming holes and decameter-scale pans of meltwater. As meltwater production rose, drainages developed, connecting pans to moulins, where meltwater was flushed into the subglacial ocean. Flushing cleansed the surface, creating a stabilizing feedback. If the dust flux rose, cryoconite was removed; if the dust flux waned, cryoconite accumulated. In addition to cyanobacteria, modern cryoconite holes are inhabited by green algae, fungi, protists, and certain metazoans. On Snowball Earth, cryoconite pans provided stable interconnected habitats for eukaryotes tolerant of fresh to brackish cold water on an ablation surface 60 million km(2) in area. Flushing and burial of organic matter was a potential source of atmospheric oxygen. Dominance of green algae among Ediacaran eukaryotic primary producers is a possible legacy of Cryogenian cryoconite pans, but a schizohaline ocean-supraglacial freshwater and subglacial brine-may have exerted selective stress on early metazoans, or

  15. The Peter Pan and Wendy syndrome: a marital dynamic.

    PubMed

    Quadrio, C

    1982-06-01

    A marital system is described which features an unfaithful and narcissistic husband, Peter Pan, and a long suffering and depressed wife, Wendy. The dynamics of their individual adjustments are examined as well as the symbiotic nature of the dyadic relationship. Other characters take their parts--Tinker Bell, Tiger Lily, and Little Lost Boys. Peter's infidelities belie a firm attachment to his Wendy/mother whilst she depends upon him for protection from forbidden impulses.

  16. PAN AIR summary document (version 1.0)

    NASA Technical Reports Server (NTRS)

    Derbyshire, T.; Sidwell, K. W.

    1982-01-01

    The capabilities and limitations of the panel aerodynamics (PAN AIR) computer program system are summarized. This program uses a higher order panel method to solve boundary value problems involving the Prandtl-Glauert equation for subsonic and supersonic potential flows. Both aerodynamic and hydrodynamic problems can be solved using this modular software which is written for the CDC 6600 and 7600, and the CYBER 170 series computers.

  17. Improving Security in the ATLAS PanDA System

    NASA Astrophysics Data System (ADS)

    Caballero, J.; Maeno, T.; Nilsson, P.; Stewart, G.; Potekhin, M.; Wenaus, T.

    2011-12-01

    The security challenges faced by users of the grid are considerably different to those faced in previous environments. The adoption of pilot jobs systems by LHC experiments has mitigated many of the problems associated with the inhomogeneities found on the grid and has greatly improved job reliability; however, pilot jobs systems themselves must then address many security issues, including the execution of multiple users' code under a common 'grid' identity. In this paper we describe the improvements and evolution of the security model in the ATLAS PanDA (Production and Distributed Analysis) system. We describe the security in the PanDA server which is in place to ensure that only authorized members of the VO are allowed to submit work into the system and that jobs are properly audited and monitored. We discuss the security in place between the pilot code itself and the PanDA server, ensuring that only properly authenticated workload is delivered to the pilot for execution. When the code to be executed is from a 'normal' ATLAS user, as opposed to the production system or other privileged actor, then the pilot may use an EGEE developed identity switching tool called gLExec. This changes the grid proxy available to the job and also switches the UNIX user identity to protect the privileges of the pilot code proxy. We describe the problems in using this system and how they are overcome. Finally, we discuss security drills which have been run using PanDA and show how these improved our operational security procedures.

  18. An electronic pan/tilt/zoom camera system

    NASA Technical Reports Server (NTRS)

    Zimmermann, Steve; Martin, H. Lee

    1991-01-01

    A camera system for omnidirectional image viewing applications that provides pan, tilt, zoom, and rotational orientation within a hemispherical field of view (FOV) using no moving parts was developed. The imaging device is based on the effect that from a fisheye lens, which produces a circular image of an entire hemispherical FOV, can be mathematically corrected using high speed electronic circuitry. An incoming fisheye image from any image acquisition source is captured in memory of the device, a transformation is performed for the viewing region of interest and viewing direction, and a corrected image is output as a video image signal for viewing, recording, or analysis. As a result, this device can accomplish the functions of pan, tilt, rotation, and zoom throughout a hemispherical FOV without the need for any mechanical mechanisms. A programmable transformation processor provides flexible control over viewing situations. Multiple images, each with different image magnifications and pan tilt rotation parameters, can be obtained from a single camera. The image transformation device can provide corrected images at frame rates compatible with RS-170 standard video equipment.

  19. The ATLAS PanDA Pilot in Operation

    NASA Astrophysics Data System (ADS)

    Nilsson, P.; Caballero, J.; De, K.; Maeno, T.; Stradling, A.; Wenaus, T.; ATLAS Collaboration

    2011-12-01

    The Production and Distributed Analysis system (PanDA) [1-2] was designed to meet ATLAS [3] requirements for a data-driven workload management system capable of operating at LHC data processing scale. Submitted jobs are executed on worker nodes by pilot jobs sent to the grid sites by pilot factories. This paper provides an overview of the PanDA pilot [4] system and presents major features added in light of recent operational experience, including multi-job processing, advanced job recovery for jobs with output storage failures, gLExec [5-6] based identity switching from the generic pilot to the actual user, and other security measures. The PanDA system serves all ATLAS distributed processing and is the primary system for distributed analysis; it is currently used at over 100 sites worldwide. We analyze the performance of the pilot system in processing real LHC data on the OSG [7], EGI [8] and Nordugrid [9-10] infrastructures used by ATLAS, and describe plans for its evolution.

  20. Baselines for the Pan-Canadian science curriculum framework.

    PubMed

    Liu, Xiufeng

    2013-01-01

    Using a Canadian student achievement assessment database, the Science Achievement Indicators Program (SAIP), and employing the Rasch partial credit measurement model, this study estimated the difficulties of items corresponding to the learning outcomes in the Pan-Canadian science curriculum framework and the latent abilities of students of grades 7, 8, 10, 11, 12 and OAC (Ontario Academic Course). The above estimates serve as baselines for validating the Pan-Canadian science curriculum framework in terms of the learning progression of learning outcomes and expected mastery of learning outcomes by grades. It was found that there was no statistically significant progression in learning outcomes from grades 4-6 to grades 7-9, and from grades 7-9 to grades 10-12; the curriculum framework sets mastery expectation about 2 grades higher than students' potential abilities. In light of the above findings, this paper discusses theoretical issues related to deciding progression of learning outcomes and setting expectation of student mastery of learning outcomes, and highlights the importance of using national assessment data to establish baselines for the above purposes. This paper concludes with recommendations for further validating the Pan-Canadian science curriculum frameworks.

  1. Keeping a pan-tilt-zoom camera calibrated.

    PubMed

    Wu, Ziyan; Radke, Richard J

    2013-08-01

    Pan-tilt-zoom (PTZ) cameras are pervasive in modern surveillance systems. However, we demonstrate that the (pan, tilt) coordinates reported by PTZ cameras become inaccurate after many hours of operation, endangering tracking and 3D localization algorithms that rely on the accuracy of such values. To solve this problem, we propose a complete model for a PTZ camera that explicitly reflects how focal length and lens distortion vary as a function of zoom scale. We show how the parameters of this model can be quickly and accurately estimated using a series of simple initialization steps followed by a nonlinear optimization. Our method requires only 10 images to achieve accurate calibration results. Next, we show how the calibration parameters can be maintained using a one-shot dynamic correction process; this ensures that the camera returns the same field of view every time the user requests a given (pan, tilt, zoom), even after hundreds of hours of operation. The dynamic calibration algorithm is based on matching the current image against a stored feature library created at the time the PTZ camera is mounted. We evaluate the calibration and dynamic correction algorithms on both experimental and real-world datasets, demonstrating the effectiveness of the techniques.

  2. Pan1 regulates transitions between stages of clathrin-mediated endocytosis.

    PubMed

    Bradford, Mary Katherine; Whitworth, Karen; Wendland, Beverly

    2015-04-01

    Endocytosis is a well-conserved process by which cells invaginate small portions of the plasma membrane to create vesicles containing extracellular and transmembrane cargo proteins. Dozens of proteins and hundreds of specific binding interactions are needed to coordinate and regulate these events. Saccharomyces cerevisiae is a powerful model system with which to study clathrin-mediated endocytosis (CME). Pan1 is believed to be a scaffolding protein due to its interactions with numerous proteins that act throughout the endocytic process. Previous research characterized many Pan1 binding interactions, but due to Pan1's essential nature, the exact mechanisms of Pan1's function in endocytosis have been difficult to define. We created a novel Pan1-degron allele, Pan1-AID, in which Pan1 can be specifically and efficiently degraded in <1 h upon addition of the plant hormone auxin. The loss of Pan1 caused a delay in endocytic progression and weakened connections between the coat/actin machinery and the membrane, leading to arrest in CME. In addition, we determined a critical role for the central region of Pan1 in endocytosis and viability. The regions important for endocytosis and viability can be separated, suggesting that Pan1 may have a distinct role in the cell that is essential for viability.

  3. Does early care affect joint attention in great apes (Pan troglodytes, Pan paniscus, Pongo abelii, Pongo pygmaeus, Gorilla gorilla)?

    PubMed

    Pitman, Caisie A; Shumaker, Robert W

    2009-08-01

    The ability to share attention with another is the foundation on which other theory of mind skills are formed. The quality of care received during infancy has been correlated with increased joint attention in humans. The purpose of this study was to assess the effects of care style (responsive or basic) and caregiver type (ape or human) during the first 6 months on joint attention in 4 great ape species (Pan troglodytes, Gorilla gorilla, Pongo spp., and Pan pansicus). Great apes engaged in joint attention with conspecifics and humans regardless of the style of early care they experienced from either a great ape mother or human caregiver. This finding suggests that joint attention is a robust ability in great apes that is resilient against at least some differences in early care. Future studies using additional measures of early care quality are recommended.

  4. The chimpanzee-specific pericentric inversions that distinguish humans and chimpanzees have identical breakpoints in Pan troglodytes and Pan paniscus.

    PubMed

    Szamalek, Justyna M; Goidts, Violaine; Searle, Jeremy B; Cooper, David N; Hameister, Horst; Kehrer-Sawatzki, Hildegard

    2006-01-01

    Seven of nine pericentric inversions that distinguish human (HSA) and chimpanzee karyotypes are chimpanzee-specific. In this study we investigated whether the two extant chimpanzee species, Pan troglodytes (common chimpanzee) and Pan paniscus (bonobo), share exactly the same pericentric inversions. The methods applied were FISH with breakpoint-spanning BAC/PAC clones and PCR analyses of the breakpoint junction sequences. Our findings for the homologues to HSA 4, 5, 9, 12, 16, and 17 confirm for the first time at the sequence level that these pericentric inversions have identical breakpoints in the common chimpanzee and the bonobo. Therefore, these inversions predate the separation of the two chimpanzee species 0.86-2 Mya. Further, the inversions distinguishing human and chimpanzee karyotypes may be regarded as early acquisitions, such that they are likely to have been present at the time of human/chimpanzee divergence. According to the chromosomal speciation theory the inversions themselves could have promoted human speciation.

  5. Multi-component testing using HZ-PAN and AgZ-PAN Sorbents for OSPREY Model validation

    SciTech Connect

    Garn, Troy G.; Greenhalgh, Mitchell; Lyon, Kevin L.; Law, Jack D.

    2015-04-01

    In efforts to further develop the capability of the Off-gas SeParation and RecoverY (OSPREY) model, multi-component tests were completed using both HZ-PAN and AgZ-PAN sorbents. The primary purpose of this effort was to obtain multi-component xenon and krypton capacities for comparison to future OSPREY predicted multi-component capacities using previously acquired Langmuir equilibrium parameters determined from single component isotherms. Experimental capacities were determined for each sorbent using two feed gas compositions of 1000 ppmv xenon and 150 ppmv krypton in either a helium or air balance. Test temperatures were consistently held at 220 K and the gas flowrate was 50 sccm. Capacities were calculated from breakthrough curves using TableCurve® 2D software by Jandel Scientific. The HZ-PAN sorbent was tested in the custom designed cryostat while the AgZ-PAN was tested in a newly installed cooling apparatus. Previous modeling validation efforts indicated the OSPREY model can be used to effectively predict single component xenon and krypton capacities for both engineered form sorbents. Results indicated good agreement with the experimental and predicted capacity values for both krypton and xenon on the sorbents. Overall, the model predicted slightly elevated capacities for both gases which can be partially attributed to the estimation of the parameters and the uncertainty associated with the experimental measurements. Currently, OSPREY is configured such that one species adsorbs and one does not (i.e. krypton in helium). Modification of OSPREY code is currently being performed to incorporate multiple adsorbing species and non-ideal interactions of gas phase species with the sorbent and adsorbed phases. Once these modifications are complete, the sorbent capacities determined in the present work will be used to validate OSPREY multicomponent adsorption predictions.

  6. The Pan-STARRS search for Near Earth Objects

    NASA Astrophysics Data System (ADS)

    Wainscoat, Richard J.; Chambers, Kenneth; Lilly, Eva; Weryk, Robert; Chastel, Serge; Denneau, Larry; Micheli, Marco

    2015-11-01

    The two Pan-STARRS telescopes, located on Haleakala, Hawaii, are 1.8-meter diameter telescopes equipped with 1.4 Gigapixel cameras that deliver 7 square degree fields of view. The first telescope, Pan-STARRS1 (PS1), has been conducting a survey for Near-Earth Objects. The second telescope, Pan-STARRS2 (PS2) is nearing completion. The telescope was commissioned using an incomplete focal plane with only 18 good detectors (60 required). The camera is presently being upgraded, and will be operated from October 2015 with 60 detectors (some engineering grade). A final upgrade to the camera in early 2016 will make the telescope fully operational.The two telescopes survey much of the sky accessible from Haleakala multiple times each lunation. The area surveyed ranges from +90 degrees in the north down to -47.5 degrees declination in the south. The “sweet spots” close to the Sun have been productive in discovery of large objects.The PS1 survey is becoming more mature and productive, having discovered more than half of all NEOs in 2015 to date, and more than 60% of the larger NEOs and PHAs discovered in 2015. Both PS1 and PS2 deliver excellent astrometry and photometry. PS1 continues to discover a significant number of large (> 1km) NEOs. PS1 has become the leading discover of comets, discovering more than half of the new comets in both 2014 and 2015.In good weather conditions, the discovery rate of NEO candidates by PS1 overwhelms the external NEO followup resources. particularly for fainter NEOs. As a result, we needed to repeat fields to recover NEO candidates. As PS2 matures, with a complete focal plane, and when the G96 camera upgrade is complete, the combination of these three telescopes will facilitate a higher NEO discovery rate, a better census of the NEOs in the sky, and better orbits for NEOs. This will in turn lead to a better understanding of the size and orbit distribution of NEOs. The Pan-STARRS NEO survey is also likely to discover asteroids suitable for

  7. The Pan-STARRS search for near-Earth objects

    NASA Astrophysics Data System (ADS)

    Wainscoat, R.; Veres, P.; Bolin, B.; Denneau, L.; Jedicke, R.; Chastel, S.; Micheli, M.

    2014-07-01

    The Pan-STARRS1 (PS1) telescope, located on Haleakala, Maui, Hawaii, is a 1.8-meter diameter wide-field survey telescope. It is equipped with the largest digital camera in the world, with almost 1.4 billion pixels, and images an area of sky of 7 square degrees. During the last 3 years, PS1 has been conducting a multipurpose survey ranging from a search for Near Earth Objects (NEOs) to cosmology. During this survey, 11 % of the observing time was dedicated to a search for NEOs. During that time, PS1 became the leading telescope in terms of discovery of NEOs and Potentially Hazardous Asteroids (PHAs). PS1 has also become an important discovery telescope for comets, and has discovered numerous main belt comets, including the recent discoveries of P/2013 P5 and P/2013 R3. The multipurpose survey being conducted by PS1 finished in February 2014, and 100 % of the observing time on PS1 is now dedicated to a search for Near Earth Objects. The primary region that is being searched is the 60 × 60 degree region around opposition (subject to observability from Hawaii's latitude, and avoiding high star density regions close to the Galactic plane). The sweet spot regions close to the Sun are also being searched. The result will be a deep multi-epoch survey of the ecliptic spanning at least 3 years. A second Pan-STARRS telescope (PS2), located adjacent to PS1, is nearing completion and will soon also be surveying the night sky for NEOs. The second telescope will allow us to survey much of the available sky on at least four epochs per month. The much larger amount of observing time dedicated to the NEO search will allow a much more systematic survey to be conducted, and this will result in better insight into the size and orbital distribution of NEOs. One of the strengths of Pan-STARRS is that the depth of its observations enables it to discover large undiscovered NEOs that are more distant from Earth. Pan-STARRS is less efficient at discovering small nearby NEOs that are fast

  8. Friction and wear of PAN/pitch-, PAN/CVI- and pitch/resin/CVI-based carbon/carbon composites

    NASA Astrophysics Data System (ADS)

    Chen, J. D.; Ju, C. P.

    1994-05-01

    We compared the tribological behavior under a high speed condition (1.7 MPa, 2000 rev/min) of six different carbon/carbon composites including three two-dimensional PAN/pitch composites (TH, TM, and TL), one two-dimensional PAN/CVI composite (E), one two-dimensional pitch/resin/CVI composite (A), and one three-dimensional PAN/pitch composite (T3D). Results indicated that, among the five two-dimensional composites, TM and E performed significantly better than the other three composites under the present condition. Both TM and E exhibited a reasonably low friction coefficient (both about 0.4) and a wear rate that was an order of magnitude lower than those of the other three. A transition in friction occurred for A, TH, and TM, but not for E or TL. The pretransitional friction coefficients of the three composites were 0.1-0.2, similar to those measured under the low speed condition. During transition, the initially formed thin, smooth lubricative film was suddenly disrupted and turned into a thick powdery debris layer that caused the friction coefficient to rise abruptly to 0.5-0.9. The powdery debris on TM and E was easily 'ironed' into a smooth and tight lubricative film to cause both friction and wear to decline. The three-dimensional composite T3D was not suitable for high speed applications owing to extensive structural damage.

  9. The Effect of Peroxyacetyl Nitrate (PAN) Chemistry on Global Oxidant Distributions

    NASA Astrophysics Data System (ADS)

    Fischer, E. V.; Jacob, D. J.; Yantosca, R. M.; Sulprizio, M.

    2013-12-01

    Nitrogen oxide radicals (NOx = NO + NO2) play a central role in role in tropospheric composition through their influence on the chemical production of ozone (O3) and the abundance of OH. To the best of our understanding, PAN (CH3COO2NO2 ) is the principal tropospheric reservoir species for NOx. It enables the long-range transport of NOx at cold temperatures and PAN decomposition releases NOx in the remote troposphere where it fuels O3 production most efficiently. We have substantially improved a global model for PAN to 1) explore the role of PAN as a NOx reservoir, and 2) quantify the impact of PAN on the global distributions of O3 and OH. Using the model alongside a global ensemble of observations, we find that PAN is more abundant than NOx except in the tropical and sub-tropical lower troposphere. PAN delivers significant NOx (>75%) to the remote (marine) lower atmosphere at northern mid-latitudes. In the upper troposphere, PAN serves as the strongest NOx sink over continental regions where convection lofts biogenic precursors and lightning provides a NOx source. NOx carried by PAN to the remote boundary layer in the NH boosts O3 production during warm months. Over the North Atlantic, PAN chemistry contributes several ppbv of O3 to the monthly mean. In most other regions of the atmosphere, the net effect of PAN is to sequester NOx and limit O3 production. This effect is strongest in the tropical upper troposphere where PAN reduces O3 by up to 12 ppbv. We find that PAN chemistry has little effect on the global mean OH concentration, mainly because of cancellations. We devote special attention to the Arctic lower troposphere because we find that it is very sensitive to PAN. Near the Arctic surface, PAN chemistry is responsible for an additional 4-8 ppbv of O3 and PAN serves to increase OH concentrations during summer by as much as 30%. We will also present the impact of PAN chemistry on the radiative forcings of NOx and non methane volatile organic compound (NMVOC

  10. The major anaerobically induced outer membrane protein of Neisseria gonorrhoeae, Pan 1, is a lipoprotein.

    PubMed Central

    Hoehn, G T; Clark, V L

    1992-01-01

    Pan 1 is an acidic outer membrane protein of Neisseria gonorrhoeae that is expressed only when gonococci are grown anaerobically. On silver-stained sodium dodecyl sulfate-polyacrylamide gels, Pan 1 migrates as an intense but diffuse 54-kDa protein. The deduced amino acid sequence of Pan 1 from the aniA (anaerobically induced protein) open reading frame reveals a lipoprotein consensus sequence, Ala-Leu-Ala-Ala-Cys, and a processed molecular mass of 39 kDa. Furthermore, there is strong homology at the N terminus and C terminus of Pan 1 to the termini of the gonococcal outer membrane lipoproteins Lip and Laz. [3H]palmitic acid labeling of gonococci grown under oxygen-limited conditions demonstrated specific incorporation of label into Pan 1, suggesting further that Pan 1 is a lipoprotein. Images PMID:1398981

  11. Evidence for formation of a PAN analogue of pinonic structure and investigation of its thermal stability

    NASA Astrophysics Data System (ADS)

    NozièRe, Barbara; Barnes, Ian

    1998-10-01

    The first evidence and laboratory study of a peroxyacetyl nitrate (PAN) analogue produced by the photooxidation of a terpene, α-pinene, is presented. This PAN analogue, assigned to 3-acetyl-2,2-dimethyl-cyclobutane-acetyl peroxynitrate and referred to as "α-pinonyl peroxynitrate" (αP-PAN) was synthesized in the gas phase from the radical (OH, Cl, Br, or NO3) initiated oxidation of pinonaldehyde (3-acetyl-2,2-dimethyl-cyclobutyl-ethanal) in the presence of excess NO2 and evidenced by Fourier transform-infrared (FT-IR) spectroscopy. Another reaction channel producing PAN was also observed for some of the radical initiators. Of particular atmospheric interest, the experiments with OH radicals demonstrated that αP-PAN is the main product of pinonaldehyde under NOx-rich conditions with a yield of (81.3±16)%, while an upper limit of the PAN yield for this reaction is around 8%. The further photooxidation of αP-PAN was also observed to produce PAN directly. The thermal stability of αP-PAN was studied between 303 and 281 K. The rate constant of thermal dissociation was found to be k-1 = 10(9.25±0.33) × exp [-(72.0±1.9)/RT] where the activation energy is in kJ mol-1. Distortions of the kinetic profiles attributed to aerosol formation were observed and led to large errors in the above estimation of k-1. Within the uncertainties, the observed thermal stability of αP-PAN is comparable to that of PAN. The tropospheric importance of pinonaldehyde and of αP-PAN are discussed.

  12. Peroxyacetyl nitrate (PAN) measurements at a remote site in New Mexico

    SciTech Connect

    Prestbo, E. ); Gaffney, J.S. )

    1988-09-01

    Photochemical oxidants are not limited to the criteria pollutant, ozone. Peroxyactyl nitrate (PAN) is probably one of the better known non-criteria oxidants. PAN was originally referred to as compound X, as it caused a unique type of plant damage to numerous crops in southern California. PAN was associated with Los Angeles photochemical smog and ozone in the late 1950s and 60s. It should not be confused with X-agent which has also been associated with photochemical oxidants. PAN has been found to be an important means of transporting NOx in remote regions. This is due to its rather long atmospheric lifetime. It reacts slowly with OH radical, is photochemically stable, and has a low water solubility. Its principal loss is due to unimolecular decomposition. The authors have been making ozone, NO, NO{sup 2}, and PAN measurements at a remote site near Los Alamos, New Mexico for an extended period of time. An automated gas chromatograph equipped with an electron capture detector is used to make the PAN measurements. Diffusion tubes with PAN/n-tridecane solutions are used to calibrate the instrument. Typical PAN data obtained at the sight are presented. The collected PAN and oxidant data are examined, and have been modeled to determine the possible concentrations of peracetic acid and methyl hydroperoxide in remote air. These studies are discussed in light of their possible implications for peroxide contributions to environmental impacts and aqueous chemistry reactions.

  13. Polymorphisms in genes related to one-carbon metabolism are not related to pancreatic cancer in PanScan and PanC4

    PubMed Central

    Leenders, Max; Bhattacharjee, Samsiddhi; Vineis, Paolo; Stevens, Victoria; Bueno-de-Mesquita, H. Bas; Shu, Xiao-Ou; Amundadottir, Laufey; Gross, Myron; Tobias, Geoffrey S.; Wactawski-Wende, Jean; Arslan, Alan A.; Duell, Eric J.; Fuchs, Charles S.; Gallinger, Steven; Hartge, Patricia; Hoover, Robert N.; Holly, Elizabeth A.; Jacobs, Eric J.; Klein, Alison P.; Kooperberg, Charles; LaCroix, Andrea; Li, Donghui; Mandelson, Margaret T.; Olson, Sara H.; Petersen, Gloria; Risch, Harvey A.; Yu, Kai; Wolpin, Brian M.; Zheng, Wei; Agalliu, Ilir; Albanes, Demetrius; Boutron-Ruault, Marie-Christine; Bracci, Paige M.; Buring, Julie E.; Canzian, Federico; Chang, Kenneth; Chanock, Stephen J.; Cotterchio, Michelle; Gaziano, J. Michael; Giovanucci, Edward L.; Goggins, Michael; Hallmans, Göran; Hankinson, Susan E.; Hoffman-Bolton, Judith A.; Hunter, David J.; Hutchinson, Amy; Jacobs, Kevin B.; Jenab, Mazda; Khaw, Kay-Tee; Kraft, Peter; Krogh, Vittorio; Kurtz, Robert C.; McWilliams, Robert R.; Mendelsohn, Julie B.; Patel, Alpa V.; Rabe, Kari G.; Riboli, Elio; Tjønneland, Anne; Trichopoulos, Dimitrios; Virtamo, Jarmo; Visvanathan, Kala; Elena, Joanne W.; Yu, Herbert; Zeleniuch-Jacquotte, Anne; Stolzenberg-Solomon, Rachael Z.

    2014-01-01

    Purpose The evidence of a relation between folate intake and one-carbon metabolism (OCM) with pancreatic cancer (PanCa) is inconsistent. In this study, the association between genes and single-nucleotide polymorphisms (SNPs) related to OCM and PanCa was assessed. Methods Using biochemical knowledge of the OCM pathway, we identified thirty-seven genes and 834 SNPs to examine in association with PanCa. Our study included 1,408 cases and 1,463 controls nested within twelve cohorts (PanScan). The ten SNPs and five genes with lowest p values (<0.02) were followed up in 2,323 cases and 2,340 controls from eight case-control studies (PanC4) that participated in PanScan2. The correlation of SNPs with metabolite levels was assessed for 649 controls from the European Prospective Investigation into Cancer and Nutrition. Results When both stages were combined, we observed suggestive associations with PanCa for rs10887710 (MAT1A) (OR 1.13, 95%CI 1.04-1.23), rs1552462 (SYT9) (OR 1.27, 95%CI 1.02-1.59), and rs7074891 (CUBN) (OR 1.91, 95%CI 1.12-3.26). After correcting for multiple comparisons, no significant associations were observed in either the first or second stage. The three suggested SNPs showed no correlations with one-carbon biomarkers. Conclusions This is the largest genetic study to date to examine the relation between germline variations in OCM-related genes polymorphisms and the risk of PanCa. Suggestive evidence for an association between polymorphisms and PanCa was observed among the cohort-nested studies, but this did not replicate in the case-control studies. Our results do not strongly support the hypothesis that genes related to OCM play a role in pancreatic carcinogenesis. PMID:23334854

  14. Investigating merging galaxies by using Pan-STARRS images

    NASA Astrophysics Data System (ADS)

    Lin, Yi-Fan; Yu, Po-Chieh; Huang, Jen-Chao; Hwang, Chorng-Yuan; Chen, Wen-Ping; Kaiser, Nick; Metcalfe, Nigel; Waters, Christopher

    2017-03-01

    Aims: We studied the r'-, z'-, and y'-band images of merging galaxies from the observations of the Panoramic Survey Telescope & Rapid Response System (Pan-STARRS). The merging galaxies were selected from our merging catalog that was created by checking the images of the Red-Sequence Cluster Survey 2 from the observations of the Canada France Hawaii Telescope. Methods: By using the homomorphic-aperture, we determined the photometric results of these merging systems. To obtain accurate photometry, we calibrated the Pan-STARRS r'-, z'-, and y'-band data to match the results of Sloan Digital Sky Survey Data Release 9. We also investigated the stellar masses of the merging galaxies by comparing the Wide-field Infrared Survey Explorer 3.4 μm emission with the calibrated y'-band data. Results: We present a catalog of the r'-, z'-, and y'-band photometric results for 4698 merging galaxies. For extended sources, our results suggest that the homomorphic-aperture method can obtain more reasonable results than the Desktop Virtual Observatory photometry. We derived new relations between the Pan-STARRS y'-band luminosities and the stellar masses of the merging galaxies. Our results show that the stellar masses of the merging galaxies range from 108 to 1013M⊙; some of the dry mergers could be as massive as 1013M⊙. The catalog is only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/600/A28

  15. Advances in pan-European flood hazard mapping

    NASA Astrophysics Data System (ADS)

    Bates, P. D.; Alfieri, L.; Salamon, P.; Bianchi, A.; Neal, J. C.; Feyen, L.

    2013-12-01

    Flood hazard maps at trans-national scale have potential for a large number of applications ranging from climate change studies, reinsurance products, aid to emergency operations for major flood crisis, among others. However, at continental scales, only few products are available, due to the difficulty of retrieving large consistent data sets. Moreover, these are produced at relatively coarse grid resolution, which limits their applications to qualitative assessments. At finer resolution, maps are often limited to country boundaries, due to limited data sharing at trans-national level. The creation of a European flood hazard map would currently imply a collection of scattered regional maps, often lacking mutual consistency due to the variety of adopted approaches and quality of the underlying input data. In this work, we derive a pan-European flood hazard map at 100m resolution. The proposed approach is based on expanding a literature cascade model through a physically based approach. A combination of distributed hydrological and hydraulic models was set up for the European domain. Then, an observed meteorological data set is used to derive a long-term streamflow simulation and subsequently coherent design flood hydrographs for a return period of 100years along the pan-European river network. Flood hydrographs are used to simulate areas at risk of flooding and output maps are merged into a pan-European flood hazard map. The quality of this map is evaluated for selected areas in Germany and United Kingdom against national/regional hazard maps. Despite inherent limitations and model resolution issues, simulated maps are in good agreement with reference maps (hit rate between 59% and 78%, critical success index between 43% and 65%), suggesting strong potential for a number of applications at the European scale

  16. In silico prediction of Gallibacterium anatis pan-immunogens.

    PubMed

    Bager, Ragnhild J; Kudirkiene, Egle; da Piedade, Isabelle; Seemann, Torsten; Nielsen, Tine K; Pors, Susanne E; Mattsson, Andreas H; Boyce, John D; Adler, Ben; Bojesen, Anders M

    2014-08-08

    The Gram-negative bacterium Gallibacterium anatis is a major cause of salpingitis and peritonitis in commercial egg-layers, leading to reduced egg production and increased mortality. Unfortunately, widespread multidrug resistance and antigenic diversity makes it difficult to control infections and novel prevention strategies are urgently needed. In this study, a pan-genomic reverse vaccinology (RV) approach was used to identify potential vaccine candidates. Firstly, the genomes of 10 selected Gallibacterium strains were analyzed and proteins selected on the following criteria; predicted surface-exposure or secretion, none or one transmembrane helix (TMH), and presence in six or more of the 10 genomes. In total, 42 proteins were selected. The genes encoding 27 of these proteins were successfully cloned in Escherichia coli and the proteins expressed and purified. To reduce the number of vaccine candidates for in vivo testing, each of the purified recombinant proteins was screened by ELISA for their ability to elicit a significant serological response with serum from chickens that had been infected with G. anatis. Additionally, an in silico prediction of the protective potential was carried out based on a protein property prediction method. Of the 27 proteins, two novel putative immunogens were identified; Gab_1309 and Gab_2312. Moreover, three previously characterized virulence factors; GtxA, FlfA and Gab_2156, were identified. Thus, by combining the pan-genomic RV approach with subsequent in vitro and in silico screening, we have narrowed down the pan-proteome of G. anatis to five vaccine candidates. Importantly, preliminary immunization trials indicated an in vivo protective potential of GtxA-N, FlfA and Gab_1309.

  17. Fatal inflammatory heart disease in a bonobo (Pan paniscus).

    PubMed

    Jones, Peter; Mahamba, Crispin; Rest, Joan; André, Claudine

    2005-02-01

    We report the first probable identification of encephalomyocarditis virus (EMCV) in a bonobo (Pan paniscus) that had been part of a forest re-introduction programme. Clinical presentation was of episodic acute on chronic heart failure and cerebral infarction with end-stage renal failure rather than sudden death which is more commonly associated with EMCV infection. A postmortem diagnosis of probable EMCV was made using gross pathological and histopathological examination. Findings included acute on chronic heart failure combined with the unusual but characteristic histopathological features of non-suppurative necrotizing myocarditis with mononuclear, inflammatory infiltration of the brain.

  18. Cannibalism in wild bonobos (Pan paniscus) at Lui Kotale.

    PubMed

    Fowler, Andrew; Hohmann, Gottfried

    2010-06-01

    We describe the cannibalization of an infant bonobo (circa 2.5 years old) at Lui Kotale, in the Democratic Republic of Congo. The infant died of unknown causes and was consumed by several community members including its mother and an older sibling one day after death. Certain features concerning the pattern of consumption fit in with previously observed episodes of cannibalism in Pan, whereas others, such as the mother's participation in consuming the body, are notable. The incident suggests that filial cannibalism among apes need not be the result of nutritional or social stress and does not support the idea that filial cannibalism is a behavioral aberration.

  19. Assessing Vulnerability to Drought on a pan-European scale

    NASA Astrophysics Data System (ADS)

    Urquijo, Julia; De Stefano, Lucia; González-Tánago, Itziar; Blauhut, Veit; Stahl, Kerstin

    2014-05-01

    During the past decade, a number of theoretical frameworks have been defined within the Disaster Risk Reduction and Climate Change communities to assess drought vulnerability at different scales, sectors, socio-political contexts, and geo-climatic conditions. However, there is still little consensus around the criteria, dimensions and factors used in these assessments; and none of them has been applied at a pan-European scale. This is due to a triple complexity. Firstly, drought as a natural hazard is a complex phenomenon due to the difficulty of determining its onset and its multiscale, multifaceted and dynamic nature. Secondly, there is an on-going debate regarding the concept of vulnerability and its constitutive elements, together with an important diversity of theoretical approaches to assess it. Finally, Europe's diversity in bioclimatic conditions, national water use practice and water use policies adds a challenging characteristic for working on pan-European scale. This work addresses the challenge of defining a methodological approach to the assessment of vulnerability factors to drought at a pan-European scale. For this purpose, we first review existing conceptual frameworks as well as of past initiatives for drought vulnerability assessment. The literature review showed that the high complexity of drought vulnerability assessment requires a clear definition of the concept of vulnerability and the associated terms, and that, before undertaking any assessment, it is necessary to clearly define the "vulnerable unit" i.e. replying to the questions 'whose vulnerability is being assessed?' and 'vulnerability to what type of impact?'. In this context, this work proposes the application of a factor-based approach, consisting in the analysis of significant factors that influence vulnerability in the context of specific situations of potential vulnerability. Those situations are framed within the specific drought characteristics of four different geoclimatic macro

  20. Pan-Tropical Forest Cover from Alos-Palsar Data

    NASA Astrophysics Data System (ADS)

    Kellndorfer, J. M.; Walker, W. S.; Bishop, J. B.; Cormier, T.; Baccini, A.; Goetz, S. J.; Laporte, N.; Holecz, F.

    2010-12-01

    1. INTRODUCTION Forest carbon monitoring is a crucial component for the scientific understanding of the terrestrial carbon cycle as well as the success of crediting developing countries for reducing greenhouse gas emissions from deforestation and forest degradation. Now, tropical and subtropical nations are challenged to establish Monitoring, Reporting, and Verification systems using remote sensing technology. We report on progress using ALOS-PALSAR data in such endeavors. 2. PAN-TROPICAL ALOS PALSAR DATA A database of ~ 17,000 ALOS-PALSAR FBD scenes has been compiled to generate a 2007 pan-tropical dataset to produce forest cover (forest/non-forest) estimates. All scenes are radiometrically and geometrically pre-processed using based on a pre-compiled SRTM global digital elevation data sets. Ancillary data like layover, shadow and local incidence angle are computed and stored for each scene. After pre-processing, data are available in 8-bit filtered (Gamma-MAP) and dB-scaled three-band composites of L-hh/L-hv/Ratio hh-hv (Figure 1), as well as unfiltered power data. More than 95 % of the data are from the FBD acquisition cycles in 2007 with missing tracks filled with data from 2008 and 2009 cycles. 3. FOREST COVER CLASSIFICATION Using ancillary satellite data a pan-tropical network of calibrated reference data was generated. These data are used to classify swath data to be combined to continental forest/non-forest cover classification mosaics. The pan-tropical map is validated with withheld training data for testing, as well as through independent operator verification with very high-resolution image data from optical sensors. A pilot study region in the Xingu Watershed in Mato Grosse, Brazil (300,000 km2) showed map agreements between ALOS-PALSAR and Landsat-TM derived classifications of greater than 99 percent [1]. 4. RELEVANCE TO GLOBAL FOREST MONITORING Global estimates of forest cover are currently produced from various sources at various spatial and temporal

  1. The Cancer Genome Atlas Pan-Cancer analysis project.

    PubMed

    Weinstein, John N; Collisson, Eric A; Mills, Gordon B; Shaw, Kenna R Mills; Ozenberger, Brad A; Ellrott, Kyle; Shmulevich, Ilya; Sander, Chris; Stuart, Joshua M

    2013-10-01

    The Cancer Genome Atlas (TCGA) Research Network has profiled and analyzed large numbers of human tumors to discover molecular aberrations at the DNA, RNA, protein and epigenetic levels. The resulting rich data provide a major opportunity to develop an integrated picture of commonalities, differences and emergent themes across tumor lineages. The Pan-Cancer initiative compares the first 12 tumor types profiled by TCGA. Analysis of the molecular aberrations and their functional roles across tumor types will teach us how to extend therapies effective in one cancer type to others with a similar genomic profile.

  2. THE PHOTOMETRIC CLASSIFICATION SERVER FOR Pan-STARRS1

    SciTech Connect

    Saglia, R. P.; Bender, R.; Seitz, S.; Senger, R.; Snigula, J.; Phleps, S.; Wilman, D.; Tonry, J. L.; Burgett, W. S.; Chambers, K. C.; Heasley, J. N.; Kaiser, N.; Magnier, E. A.; Morgan, J. S.; Greisel, N.; Bailer-Jones, C. A. L.; Klement, R. J.; Rix, H.-W.; Smith, K.; Green, P. J.; and others

    2012-02-20

    The Pan-STARRS1 survey is obtaining multi-epoch imaging in five bands (g{sub P1} r{sub P1} i{sub P1} z{sub P1} y{sub P1}) over the entire sky north of declination -30 deg. We describe here the implementation of the Photometric Classification Server (PCS) for Pan-STARRS1. PCS will allow the automatic classification of objects into star/galaxy/quasar classes based on colors and the measurement of photometric redshifts for extragalactic objects, and will constrain stellar parameters for stellar objects, working at the catalog level. We present tests of the system based on high signal-to-noise photometry derived from the Medium-Deep Fields of Pan-STARRS1, using available spectroscopic surveys as training and/or verification sets. We show that the Pan-STARRS1 photometry delivers classifications and photometric redshifts as good as the Sloan Digital Sky Survey (SDSS) photometry to the same magnitude limits. In particular, our preliminary results, based on this relatively limited data set down to the SDSS spectroscopic limits, and therefore potentially improvable, show that stars are correctly classified as such in 85% of cases, galaxies in 97%, and QSOs in 84%. False positives are less than 1% for galaxies, Almost-Equal-To 19% for stars, and Almost-Equal-To 28% for QSOs. Moreover, photometric redshifts for 1000 luminous red galaxies up to redshift 0.5 are determined to 2.4% precision (defined as 1.48 Multiplication-Sign Median|z{sub phot} - z{sub spec}|/(1 + z)) with just 0.4% catastrophic outliers and small (-0.5%) residual bias. For bluer galaxies up to the same redshift, the residual bias (on average -0.5%) trend, percentage of catastrophic failures (1.2%), and precision (4.2%) are higher, but still interestingly small for many science applications. Good photometric redshifts (to 5%) can be obtained for at most 60% of the QSOs of the sample. PCS will create a value-added catalog with classifications and photometric redshifts for eventually many millions of sources.

  3. Evidence of leopard predation on bonobos (Pan paniscus).

    PubMed

    D'Amour, Danielle E; Hohmann, Gottfried; Fruth, Barbara

    2006-01-01

    Current models of social organization assume that predation is one of the major forces that promotes group living in diurnal primates. As large body size renders some protection against predators, gregariousness of great apes and other large primate species is usually related to other parameters. The low frequency of observed cases of nonhuman predation on great apes seems to support this assumption. However, recent efforts to study potential predator species have increasingly accumulated direct and indirect evidence of predation by leopards (Panthera pardus) on chimpanzees and gorillas. The following report provides the first evidence of predation by a leopard on bonobos (Pan paniscus).

  4. Wintertime peroxyacetyl nitrate (PAN) in the megacity Beijing: role of photochemical and meteorological processes.

    PubMed

    Zhang, Hualong; Xu, Xiaobin; Lin, Weili; Wang, Ying

    2014-01-01

    Previous measurements of peroxyacetyl nitrate (PAN) in Asian megacities were scarce and mainly conducted for relative short periods in summer. Here, we present and analyze the measurements of PAN, O3, NO(x), etc., made at an urban site (CMA) in Beijing from 25 January to 22 March 2010. The hourly concentration of PAN averaged 0.70 x 10(-9) mol/mol (0.23 x 10(-9) -3.51 x 10(-9) mol/mol) and was well correlated with that of NO2 but not O3, indicating that the variations of the winter concentrations of PAN and 03 in urban Beijing are decoupled with each other. Wind conditions and transport of air masses exert very significant impacts on O3, PAN, and other species. Air masses arriving at the site originated either from the boundary layer over the highly polluted N-S-W sector or from the free troposphere over the W-N sector. The descending free-tropospheric air was rich in O3, with an average PAN/O3 ratio smaller than 0.031, while the boundary layer air over the polluted sector contained higher levels of PAN and primary pollutants, with an average PAN/O3 ratio of 0.11. These facts related with transport conditions can well explain the observed PAN-O3 decoupling. Photochemical production is important to PAN in the winter over Beijing. The concentration of the peroxyacetyl (PA) radical was estimated to be in the range of 0.0014 x 10(-12) -0.0042 x 10(-12) mol/mol. The contributions of the formation reaction and thermal decomposition to PAN's variation were calculated and found to be significant even in the colder period in air over Beijing, with the production exceeding the decomposition.

  5. New insights into the expression and functions of the Kaposi's sarcoma-associated herpesvirus long noncoding PAN RNA.

    PubMed

    Conrad, Nicholas K

    2016-01-02

    The Kaposi's sarcoma-associated herpesvirus (KSHV) is a clinically relevant pathogen associated with several human diseases that primarily affect immunocompromised individuals. KSHV encodes a noncoding polyadenylated nuclear (PAN) RNA that is essential for viral propagation and viral gene expression. PAN RNA is the most abundant viral transcript produced during lytic replication. The accumulation of PAN RNA depends on high levels of transcription driven by the Rta protein, a KSHV transcription factor necessary and sufficient for latent-to-lytic phase transition. In addition, KSHV uses several posttranscriptional mechanisms to stabilize PAN RNA. A cis-acting element, called the ENE, prevents PAN RNA decay by forming a triple helix with its poly(A) tail. The viral ORF57 and the cellular PABPC1 proteins further contribute to PAN RNA stability during lytic phase. PAN RNA functions are only beginning to be uncovered, but PAN RNA has been proposed to control gene expression by several different mechanisms. PAN RNA associates with the KSHV genome and may regulate gene expression by recruiting chromatin-modifying factors. Moreover, PAN RNA binds the viral latency-associated nuclear antigen (LANA) protein and decreases its repressive activity by sequestering it from the viral genome. Surprisingly, PAN RNA was found to associate with translating ribosomes, so this noncoding RNA may be additionally used to produce viral peptides. In this review, I highlight the mechanisms of PAN RNA accumulation and describe recent insights into potential functions of PAN RNA.

  6. Share your sweets: Chimpanzee (Pan troglodytes) and bonobo (Pan paniscus) willingness to share highly attractive, monopolizable food sources.

    PubMed

    Byrnit, Jill T; Høgh-Olesen, Henrik; Makransky, Guido

    2015-08-01

    All over the world, humans (Homo sapiens) display resource-sharing behavior, and common patterns of sharing seem to exist across cultures. Humans are not the only primates to share, and observations from the wild have long documented food sharing behavior in our closest phylogenetic relatives, chimpanzees (Pan troglodytes) and bonobos (Pan paniscus). However, few controlled studies have been made in which groups of Pan are introduced to food items that may be shared or monopolized by a first food possessor, and very few studies have examined what happens to these sharing patterns if the food in question is a highly attractive, monopolizable food source. The one study to date to include food quality as the independent variable used different types of food as high- and low-value items, making differences in food divisibility and size potentially confounding factors. It was the aim of the present study to examine the sharing behavior of groups of captive chimpanzees and bonobos when introducing the same type of food (branches) manipulated to be of 2 different degrees of desirability (with or without syrup). Results showed that the large majority of food transfers in both species came about as sharing in which group members were allowed to cofeed or remove food from the stock of the food possessor, and the introduction of high-value food resulted in more sharing, not less. Food sharing behavior differed between species in that chimpanzees displayed significantly more begging behavior than bonobos. Bonobos, instead, engaged in sexual invitations, which the chimpanzees never did. (PsycINFO Database Record

  7. An Alternative Strategy for Pan-acetyl-lysine Antibody Generation.

    PubMed

    Kim, Sun-Yee; Sim, Choon Kiat; Zhang, Qiongyi; Tang, Hui; Brunmeir, Reinhard; Pan, Hong; Karnani, Neerja; Han, Weiping; Zhang, Kangling; Xu, Feng

    2016-01-01

    Lysine acetylation is an important post-translational modification in cell signaling. In acetylome studies, a high-quality pan-acetyl-lysine antibody is key to successful enrichment of acetylated peptides for subsequent mass spectrometry analysis. Here we show an alternative method to generate polyclonal pan-acetyl-lysine antibodies using a synthesized random library of acetylated peptides as the antigen. Our antibodies are tested to be specific for acetyl-lysine peptides/proteins via ELISA and dot blot. When pooled, five of our antibodies show broad reactivity to acetyl-lysine peptides, complementing a commercial antibody in terms of peptide coverage. The consensus sequence of peptides bound by our antibody cocktail differs slightly from that of the commercial antibody. Lastly, our antibodies are tested in a proof-of-concept to analyze the acetylome of HEK293 cells. In total we identified 1557 acetylated peptides from 416 proteins. We thus demonstrated that our antibodies are well-qualified for acetylome studies and can complement existing commercial antibodies.

  8. Direct evidence for the Homo-Pan clade.

    PubMed

    Wimmer, Rainer; Kirsch, Stefan; Rappold, Gudrun A; Schempp, Werner

    2002-01-01

    For a long time, the evolutionary relationship between human and African apes, the 'trichotomy problem', has been debated with strong differences in opinion and interpretation. Statistical analyses of different molecular DNA data sets have been carried out and have primarily supported a Homo-Pan clade. An alternative way to address this question is by the comparison of evolutionarily relevant chromosomal breakpoints. Here, we made use of a P1-derived artificial chromosome (PAC)/bacterial artificial chromosome (BAC) contig spanning approximately 2.8 Mb on the long arm of the human Y chromosome, to comparatively map individual PAC clones to chromosomes from great apes, gibbons, and two species of Old World monkeys by fluorescence in-situ hybridization. During our search for evolutionary breakpoints on the Y chromosome, it transpired that a transposition of an approximately 100-kb DNA fragment from chromosome 1 onto the Y chromosome must have occurred in a common ancestor of human, chimpanzee and bonobo. Only the Y chromosomes of these three species contain the chromosome-1-derived fragment; it could not be detected on the Y chromosomes of gorillas or the other primates examined. Thus, this shared derived (synapomorphic) trait provides clear evidence for a Homo-Pan clade independent of DNA sequence analysis.

  9. Fast, simple, and good pan-sharpening method

    NASA Astrophysics Data System (ADS)

    Palubinskas, Gintautas

    2013-01-01

    Pan-sharpening of optical remote sensing multispectral imagery aims to include spatial information from a high-resolution image (high frequencies) into a low-resolution image (low frequencies) while preserving spectral properties of a low-resolution image. From a signal processing view, a general fusion filtering framework (GFF) can be formulated, which is very well suitable for a fusion of multiresolution and multisensor data such as optical-optical and optical-radar imagery. To reduce computation time, a simple and fast variant of GFF-high-pass filtering method (HPFM)-is proposed, which performs filtering in signal domain and thus avoids time-consuming FFT computations. A new joint quality measure based on the combination of two spectral and spatial measures was proposed for quality assessment by a proper normalization of the ranges of variables. Quality and speed of six pan-sharpening methods-component substitution (CS), Gram-Schmidt (GS) sharpening, Ehlers fusion, Amélioration de la Résolution Spatiale par Injection de Structures, GFF, and HPFM-were evaluated for WorldView-2 satellite remote sensing data. Experiments showed that the HPFM method outperforms all the fusion methods used in this study, even its parentage method GFF. Moreover, it is more than four times faster than GFF method and competitive with CS and GS methods in speed.

  10. A Pan-African thermal event in southern India

    NASA Astrophysics Data System (ADS)

    Miller, Jonathan S.; Santosh, M.; Pressley, Rachel A.; Clements, Alina S.; Rogers, John J. W.

    UPb zircon data from five igneous suites confirm previous studies that demonstrated widespread Pan-African magmatism in the Granulite Terrain of southern India. Ages determined here are ˜560 Ma for the Peralimala Granite and ˜555 Ma for the Kalpatta Granite, both north of the Palghat-Cauvery lineament, and ˜585 Ma for a charnockite in the Cardamom massif south of the lineament. Zircon from a pegmatite in the Kerala khondalite belt at Melankode yields an age of 512 Ma. Resetting of zircons in the 2500-Ma Arsikere Granite of the western Dharwar craton probably occurred at ˜450 Ma. These ages and the concentration of Pan-African granitic magmatism around the Indian portion of a broad region of granulite-facies metamorphism in East Gondwana demostrates generation of a restricted area of high temperature either above a rising plume or a zone of rifting. Mantle-derived fluids continued to move upward through the crust of southern India for at least 100 m.y. after the peak of magmatism, and the entire region was still cooling at 400 Ma.

  11. The ExoMars PanCam Instrument

    NASA Astrophysics Data System (ADS)

    Griffiths, Andrew; Coates, Andrew; Muller, Jan-Peter; Jaumann, Ralf; Josset, Jean-Luc; Paar, Gerhard; Barnes, David

    2010-05-01

    The ExoMars mission has evolved into a joint European-US mission to deliver a trace gas orbiter and a pair of rovers to Mars in 2016 and 2018 respectively. The European rover will carry the Pasteur exobiology payload including the 1.56 kg Panoramic Camera. PanCam will provide multispectral stereo images with 34 deg horizontal field-of-view (580 microrad/pixel) Wide-Angle Cameras (WAC) and (83 microrad/pixel) colour monoscopic "zoom" images with 5 deg horizontal field-of-view High Resolution Camera (HRC). The stereo Wide Angle Cameras (WAC) are based on Beagle 2 Stereo Camera System heritage [1]. Integrated with the WACs and HRC into the PanCam optical bench (which helps the instrument meet its planetary protection requirements) is the PanCam interface unit (PIU); which provides image storage, a Spacewire interface to the rover and DC-DC power conversion. The Panoramic Camera instrument is designed to fulfil the digital terrain mapping requirements of the mission [2] as well as providing multispectral geological imaging, colour and stereo panoramic images and solar images for water vapour abundance and dust optical depth measurements. The High Resolution Camera (HRC) can be used for high resolution imaging of interesting targets detected in the WAC panoramas and of inaccessible locations on crater or valley walls. Additionally HRC will be used to observe retrieved subsurface samples before ingestion into the rest of the Pasteur payload. In short, PanCam provides the overview and context for the ExoMars experiment locations, required to enable the exobiology aims of the mission. In addition to these baseline capabilities further enhancements are possible to PanCam to enhance it's effectiveness for astrobiology and planetary exploration: 1. Rover Inspection Mirror (RIM) 2. Organics Detection by Fluorescence Excitation (ODFE) LEDs [3-6] 3. UVIS broadband UV Flux and Opacity Determination (UVFOD) photodiode This paper will discuss the scientific objectives and resource

  12. Peroxyacetyl nitrate (PAN) at the urban core site of Seoul during 2015 MAPS / KORUS - AQ

    NASA Astrophysics Data System (ADS)

    Lee, J. S.; Lee, G.; Lee, M.; Lee, H.

    2015-12-01

    A few measurements of atmospheric PAN were made in Seoul for the last decade. One study showed the average and maximum PAN concentration in summer of 2004 and 2005 with 0.8 ppb and 10.4 ppb and another study specified 0.64 ppb and 5.03 ppb, respectively in 2011. In this study, the measurements of peroxyacetyl nitrate (PAN) have been conducted at an urban site situated in KIST campus (Korea Institute of Science and Technology, Seoul, 127° 2'E, 37° 36'N) from May 18 to June 12, 2015. PAN was measured every 2 minutes by a fast chromatography with luminol-based chemiluminescence detection. Concentration of PAN ranged from 0.15ppbv to 4.37ppbv, with the average of 0.57 ppbv. PAN revealed its peak between 2 and 4 pm matching with the photochemical activities and precursor emission. When comparing with historic data of PAN in urban Seoul during the past decade, it has decreased about 50%. The rather rapid decrease of summertime PAN level for last ten years in Seoul will be discussed further with the behaviors of its precursor species.

  13. Sampling Bee Communities (Hymenoptera: Apiformes) in a Desert Landscape: Are Pan Traps Sufficient?

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Pan traps (colored plastic bowls) are frequently used as efficient standardized method of sampling bee faunas. We explored the utility of pan traps in three colors compared to net collecting using simultaneous sampling at biweekly intervals throughout the flowering season (May-Sep) at 11 sites in t...

  14. High resolution mid-infrared cross-sections for peroxyacetyl nitrate (PAN) vapour

    NASA Astrophysics Data System (ADS)

    Allen, G.; Remedios, J. J.; Newnham, D. A.; Smith, K. M.; Monks, P. S.

    2004-09-01

    Absorption spectra of peroxyacetyl nitrate (PAN, CH3C(O)OONO2) vapour at room temperature (295 K) have been measured in the mid-infrared range, 550-2200 cm-1 (18.2-3.33 µm), using a Fourier transform infrared spectrometer at instrument resolutions of 0.25 and 0.03 cm-1 (unapodised). Both cross-section data and integrated absorption intensities for the five principal bands in the PAN spectra in this spectral range have been derived from fourteen separate PAN transmission spectra measurements. Band intensities and band centre absorptivities are also reported for four weaker PAN absorption bands in the mid infrared for the first time. These observations are the highest spectral resolution measurements of PAN bands recorded in the infrared to date. For three of the five strongest bands, the absolute integrated absorption intensities are in excellent agreement with previous studies. A 4.8% lower integrated intensity was found for the 1741 cm-1 νas (NO2) PAN absorption band, possibly as a result of the removal in this work of spectra affected by subtle acetone contamination, while a 10.6% higher intensity was determined for the 1163 cm-1 ν (C-O) absorption band. No direct effects of spectral resolution were observed. The improved accuracy of these absorption cross-sections will allow more accurate investigations of PAN using infrared spectroscopy, particularly for remote sensing of PAN in the atmosphere.

  15. Evaluation of Pan Coefficients for Estimating Reference Evapotranspiration in Southern Taiwan

    NASA Astrophysics Data System (ADS)

    Yeh, H.

    2006-12-01

    Evapotranspiration is an important process of water transfer in the hydrosphere and atmosphere, which plays an active role in the hydrological cycle. Evaporation pan (Epan) data are often used to estimate reference evapotranspiration (ETref) for use in water resource planning. Generally, ETref is estimated as the product of the Epan data and a pan coefficient (Kpan). However, reliable estimation of ETref using Epan depends on the accurate determination of pan coefficients Kpan. Many different methods for estimating ETref have been developed, among which the Penman-Monteith method is demonstrated to be especially excellent by the Food and Agriculture Organization (FAO). In this study, the Penman-Monteith reference evapotranspiration, pan evaporation, and pan coefficient are calculated, compared and regionally mapped at nine meteorological stations during 1990-2004 in Southern Taiwan. The results show the reference evapotranspiration and pan evaporation have similar regional distribution patterns in the southern Taiwan both with the highest values being in the lower region and the lowest values being in the upper region. In addition, the pan coefficient, Kpan, varies both regionally and seasonally. Smallest Kpan values are found in the upper reach of the southern Taiwan, meaning that the relative difference between the reference evapotranspiration and pan evaporation is the biggest in the region, the largest Kpan values are obtained in the western area of southern Taiwan. This distribution pattern provides valuable information for regional hydrological studies since it is one of the most important factors determining regional actual evapotranspiration.

  16. A method for installing zero-tension pan and wick lysimeters in soil

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Zero-tension pan lysimeters and passive capillary fiberglass wick lysimeters are useful in determining water quality and volumetric aspects of subsurface water flow. Installation of pan and wick lysimeters beneath undisturbed soil may be complicated by the tendency for the soil to cave-in as the lys...

  17. Pan American World Airways flight training: A new direction. Flight operations resource management

    NASA Technical Reports Server (NTRS)

    Butler, Roy

    1987-01-01

    The Pan Am Flight Training Department shares the experiences it is having in its attempt to integrate cockpit resource management philosophies into its training programs. A slide-tape presentation on Pan Am's new direction in flight training is presented and briefly discussed.

  18. High-resolution genetic mapping of maize pan-genome sequence anchors

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In addition to single-nucleotide polymorphisms, structural variation is abundant in many plant genomes. The structural variation across a species can be represented by a ‘pan-genome’, which is essential to fully understand the genetic control of phenotypes. However, the pan-genome’s complexity hinde...

  19. Mass spectral determination of phenylacetonitrile (PAN) levels in body tissues of adult desert locust, Schistocerca gregaria

    Technology Transfer Automated Retrieval System (TEKTRAN)

    : Wings and legs of the gregarious desert locust, Schistocerca gregaria have been shown to be release sites of phenylacetonitrile (PAN), the major adult male-produced pheromone. However, there is limited information on the distribution of PAN within the locust. Here we show, using gas chromatograph...

  20. Functionalization of electrospun β-cyclodextrin/polyacrylonitrile (PAN) with silver nanoparticles: Broad-spectrum antibacterial property

    NASA Astrophysics Data System (ADS)

    Wang, Shan; Bai, Jie; Li, Chunping; Zhang, Jianbin

    2012-11-01

    Polyacrylonitrile (PAN) nanofibers containing β-cyclodextrin (β-CD) and Ag nanoparticles have been prepared by electrospinning technology. The silver nanoparticles were obtained from the AgNO3/PAN/DMF solution, in which AgNO3 acted as the precursor, DMF as reducing reagent, and PAN as protective agent. Then, β-CD was added to above solution and the resultant Ag/β-CD-PAN/DMF solution was directly electrospun to prepare Ag/β-CD-PAN nanofibers. The morphology of the nanofibers has been characterized by scanning electron microscopy (SEM) and transmission electron microscopy (TEM). The antimicrobial properties were investigated by Gram-positive Staphylococcus aureus (S. aureus) and Gram-negative Escherichia coli (E. coli) bacteria, and the results indicated that the composite nanofibers showed stronger antibacterial activity.

  1. Endocranial shape asymmetries in Pan paniscus, Pan troglodytes and Gorilla gorilla assessed via skull based landmark analysis.

    PubMed

    Balzeau, Antoine; Gilissen, Emmanuel

    2010-07-01

    Brain shape asymmetries or petalias consist of the extension of one cerebral hemisphere beyond the other. A larger frontal or caudal projection is usually coupled with a larger lateral extent of the more projecting hemisphere relative to the other. The concurrence of these petalial components is characteristic of hominins. Studies aimed at quantifying petalial asymmetries in human and great ape endocasts rely on the definition of the midline of the endocranial surface. Studies of brain material show that, at least in humans, most of the medial surface of the left occipital lobe distorts along the midline and protrudes on to the right side, making it difficult for midline and corresponding left and right reference point identification. In order to accurately quantify and compare brain shape asymmetries in extant hominid species, we propose here a new protocol based on the objective definition of cranial landmarks. We describe and quantify for the first time in three dimensions the positions of frontal and occipital protrusions in large samples of Pan paniscus, Pan troglodytes and Gorilla gorilla. This study confirms the existence of frontal and occipital petalias in African apes. Moreover, the detailed analysis of the 3D structure of these petalias reveals shared features, as well as features that are unique to the different great ape species.

  2. Great apes' (Pan troglodytes, Pan paniscus, Gorilla gorilla, Pongo pygmaeus) understanding of tool functional properties after limited experience.

    PubMed

    Herrmann, Esther; Wobber, Victoria; Call, Josep

    2008-05-01

    Primates' understanding of tool functionality has been investigated extensively using a paradigm in which subjects are presented with a tool that they must use to obtain an out-of-reach reward. After being given experience on an initial problem, monkeys can transfer their skill to tools of different shapes while ignoring irrelevant tool changes (e.g., color). In contrast, monkeys without initial training perform poorly on the same tasks. Compared to most monkeys, great apes show a clear propensity for tool using and may not require as much experience to succeed on tool functionality tasks. We investigated this question by presenting 171 apes (Pan troglodytes, Pan paniscus, Gorilla gorilla, and Pongo pygmaeus) with several tool-use problems without giving them initial training or familiarizing them with the test materials. Apes succeeded without experience, but only on problems based on basic properties such as the reward being supported by an object. However, only minimal experience was sufficient to allow them to quickly improve their performance on more complex problems in which the reward was not in contact with the tool.

  3. Inferences about the location of food in the great apes (Pan paniscus, Pan troglodytes, Gorilla gorilla, and Pongo pygmaeus).

    PubMed

    Call, Josep

    2004-06-01

    Bonobos (Pan paniscus; n = 4), chimpanzees (Pan troglodytes; n = 12), gorillas (Gorilla gorilla; n = 8), and orangutans (Pongo pygmaeus; n = 6) were presented with 2 cups (1 baited) and given visual or auditory information about their contents. Visual information consisted of letting subjects look inside the cups. Auditory information consisted of shaking the cup so that the baited cup produced a rattling sound. Subjects correctly selected the baited cup both when they saw or heard the food. Nine individuals were above chance in both visual and auditory conditions. More important, subjects as a group selected the baited cup when only the empty cup was either shown or shaken, which means that subjects chose correctly without having seen or heard the food (i.e., inference by exclusion). Control tests showed that subjects were not more attracted to noisy cups, avoided shaken noiseless cups, or learned to use auditory information as a cue during the study. It is concluded that subjects understood that the food caused the noise, not simply that the noise was associated with the food.

  4. Source analysis of peroxyacetyl nitrate (PAN) in Guangzhou, China: a yearlong observation study

    NASA Astrophysics Data System (ADS)

    Wang, B. G.; Zhu, D.; Zou, Y.; Wang, H.; Zhou, L.; Ouyang, X.; Shao, H. F.; Deng, X. J.

    2015-06-01

    In recent years, photochemical smog has been a major cause of air pollution in the metropolitan area of Guangzhou, China, with a continuing increase in the concentrations of photochemical pollutants. The concentration of peroxyacetyl nitrate (PAN) has often been found to reach very high levels, posing a potential threat to the public health. To better understand the changes in PAN concentration and its sources, a study was carried from January to December of 2012 at the Guangzhou Panyu Atmospheric Composition Station (GPACS) to measure the atmospheric concentrations of PAN as well as those of ozone (O3), nitrogen oxides (NOx), and non-methane hydrocarbon (NMHC). These data were analyzed to investigate the quantitative relationships between PAN and its precursors. In the study period, the hourly concentrations of PAN varied from below instrument detection limit to 12.0 ppbv. The yearly mean concentration of PAN was 0.84 ppbv, with the daily mean concentration exceeding 5 ppbv in 32 of the total observation days. Calculations indicate that among the measured NMHC species, alkenes accounted for 53 % of the total NMHC contribution to the PAN production, with aromatics and alkanes accounting for about 11 and 7 % of the total, respectively. During the period of our observation only a modest correlation was found between the concentrations of PAN and O3 for daytime hours, and observed PAN concentrations were relatively high even though the observed NMHCs/NOx ratio was low. This suggests regional air mass transport of pollutants had a major impact on the PAN concentrations in Guangzhou area.

  5. PANs measurements on board theNOAA P-3 during TexAQS-II

    NASA Astrophysics Data System (ADS)

    Zheng, W.; Flocke, F. M.; Ryerson, T. B.; Trainer, M. K.; Atlas, E. L.; Schauffler, S.; Donnelly, S.; Holloway, J. S.

    2007-12-01

    Measurements of peroxycarboxylic nitric anhydrides (PANs, i.e. PAN, PPN, PiBN, APAN, MPAN, and MoPAN) were made using the NCAR PAN-CIGARette chemical ionization mass spectrometer on board the NOAA P-3 aircraft during the 2006 Texas Air Quality Study II (TexAQS-II). In this poster, we present the PANs measurements made during the flight on September 27th as a case study. Two separate plumes from Downtown Houston and the Houston Ship Channel were transported in parallel to the north on that day. The flight track crossed these plumes 8 times at increasing distances downwind, and according to the CO distribution, dilution with surrounding air masses was very slow. These conditions make this very nice case for a pollutant transport and chemistry study. The PAN/PPN ratio increased about 18% as the air mass moved away from the pollution source to the furthest leg which is about 130 km north of downtown Houston. As the photolysis rates for PAN and PPN are similar to each other and the thermal decomposition of PAN is faster than PPN, this ratio change is most likely owing to the difference in the chemistry of the source hydrocarbons for these two PAN species, and indicates a faster depletion of PPN precursors (mainly propanal and 1-butene) as the air masses get older. Also, the relative production of ozone and PANs for the Houston city plume and the ship channel plume are analyzed and compared for this flight, demonstrating the difference in the photochemical processes for urban pollution vs. petroleum industry emissions.

  6. Evaluation of polyacrylonitrile (PAN) as a binding polymer for absorbers used to treat liquid radioactive wastes

    SciTech Connect

    Sebesta, F.; John, J.; Motl, A.; Stamberg, K.

    1995-11-01

    The chemical and radiation stability of polyacrylonitrile (PAN) in the form of beads (B-PAN), similar to the beads of composite absorbers, and one selected composite absorber (ammonium molybdophosphate, the active component in PAN binder [AMP-PAN], a prospective candidate for the treatment of acidic wastes) were studied. Aqueous 1M HNO{sub 3} + 1M NaNO{sub 3}, 1M NaOH + 1M NaNO{sub 3}, and 1M NaOH were chosen as simulants of DOE acidic and alkaline wastes. In addition,radiation stability was determined indistilled water. The chemical stability of B-PAN and AMP-PAN beads was tested for a period up to one month of contact with the solution at ambient temperature. The radiation stability of the beads was checked in a radiation dose range 10{sup 3}--10{sup 6} Gy (10{sup 5}--10{sup 8} rads). In acidic solutions the stability of PAN binder was proved not to be limited by either chemical or radiation decomposition. PAN binder may thus be used for preparing composite absorbers for treatment of acid wastes from DOE facilities. The same conclusion is valid for alkaline solutions with pH up to 13. In highly alkaline solutions (concentration of NAOH higher than I M) and in the presence of NaNO{sub 3}, the stability of the tested polyacrylonitrile polymer was sufficient for applications not extending over 10 days. Cross-linking of the polymer caused by ionizing radiation was found to have a positive influence on chemical stability. This effect enables a longer period of applicability of PAN-based composite absorbers. Because of the high sorption rate achievable with PAN-based absorbers, the stability achieved is sufficient for most applications in the DOE complex. The chemical stability of binding polymer may also be further improved by testing another, more suitable type of polymer from the broad family of polyacrylonitrile polymers.

  7. Pan-Planets: Searching for hot Jupiters around cool dwarfs

    NASA Astrophysics Data System (ADS)

    Obermeier, C.; Koppenhoefer, J.; Saglia, R. P.; Henning, Th.; Bender, R.; Kodric, M.; Deacon, N.; Riffeser, A.; Burgett, W.; Chambers, K. C.; Draper, P. W.; Flewelling, H.; Hodapp, K. W.; Kaiser, N.; Kudritzki, R.-P.; Magnier, E. A.; Metcalfe, N.; Price, P. A.; Sweeney, W.; Wainscoat, R. J.; Waters, C.

    2016-03-01

    The Pan-Planets survey observed an area of 42 sq deg. in the galactic disk for about 165 h. The main scientific goal of the project is the detection of transiting planets around M dwarfs. We establish an efficient procedure for determining the stellar parameters Teff and log g of all sources using a method based on SED fitting, utilizing a three-dimensional dust map and proper motion information. In this way we identify more than 60 000 M dwarfs, which is by far the largest sample of low-mass stars observed in a transit survey to date. We present several planet candidates around M dwarfs and hotter stars that are currently being followed up. Using Monte Carlo simulations we calculate the detection efficiency of the Pan-Planets survey for different stellar and planetary populations. We expect to find 3.0+3.3-1.6 hot Jupiters around F, G, and K dwarfs with periods lower than 10 days based on the planet occurrence rates derived in previous surveys. For M dwarfs, the percentage of stars with a hot Jupiter is under debate. Theoretical models expect a lower occurrence rate than for larger main sequence stars. However, radial velocity surveys find upper limits of about 1% due to their small sample, while the Kepler survey finds a occurrence rate that we estimate to be at least 0.17b(+0.67-0.04) %, making it even higher than the determined fraction from OGLE-III for F, G and K stellar types, 0.14 (+0.15-0.076) %. With the large sample size of Pan-Planets, we are able to determine an occurrence rate of 0.11 (+0.37-0.02) % in case one of our candidates turns out to be a real detection. If, however, none of our candidates turn out to be true planets, we are able to put an upper limit of 0.34% with a 95% confidence on the hot Jupiter occurrence rate of M dwarfs. This limit is a significant improvement over previous estimates where the lowest limit published so far is 1.1% found in the WFCAM Transit Survey. Therefore we cannot yet confirm the theoretical prediction of a lower

  8. Food protection activities of the Pan American Health Organization.

    PubMed

    1994-03-01

    One of the most widespread health problems in the Caribbean and Latin America is contaminated food and foodborne illness. The Pan American Health Organization (PAHO) has been a major force in activities to strengthen food protection. The program within the regional Program of Technical Cooperation is administered by the Veterinary Public Health program and under the guidance of the Pan American Institute for Food protection and Zoonoses in Buenos Aires, Argentina. A food action plan for 1986-90 was established at the 1986 Pan American Sanitary Conference, and extended to cover 1991-95. Program activities during the 1990s covered cholera, epidemiologic surveillance, street food vendors, shellfish poisoning, meat, national programs, information systems, air catering, food irradiation, and tourism. The action plan for 1991-95 promoted greater political support and cooperation within and between related sectors and institutions, management, and education. The aims were to organize national integrated programs, to strengthen laboratory services, to strengthen inspection services, to establish epidemiologic surveillance systems, and to promote food protection through community participation. Program activities included the initiatives of the Veterinary Public Health Program in 1991 to distribute literature on the transmission of cholera by foods. Studies were conducted in Bolivia, Colombia, and Peru on food contamination. Microbiologists received training on standard methods for detecting Vibrio cholerae in foods. A working group of experts from 10 countries examined the issues and produced a guide for investigating the incidence of foodborne disease. PAHO has contributed to the formation of an Inter-American Network for Epidemiologic Surveillance of Foodborne Diseases. PAHO has worked to improve hygienic practices among street food vendors. Seminars on paralytic shellfish poisoning were conducted in 1990; the outcome was a network working to strengthen national

  9. Results from the Pan-STARRS1 Sky Surveys

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.; PS1 Science Consortium

    2015-01-01

    Results from the Pan-STARRS1 Sky Surveys spanning the field of astronomy from Near Earth Objects to Cosmology will be presented.Scientific highlights from the PS1 Sky Surveys include: the photometric and astrometric reference catalog with unprecedented size, accuracy, and dynamic range discovery of 1200 NEO's, 120 PHAs, 60 comets; discovery of rotational break up as the origin of catastrophic disruption of solar system bodies; first free floating planet PSO 318-22 and other ultra-cool objects; first 3-dimensional map of dust in the Milky Way; new distances to molecular clouds; new stellar streams in the Milky Way and new globular clusters; new satellite galaxies of M31; eclipsing binaries in M31 - an important step for the distance ladder; micro-lensing events and other variables in M31: super-luminous and under-luminous stellar explosions; first clear tidal disruption of star by supermassive black hole; many new high redshift quasars; and a new determination of the dark energy equation of state from SnIa photometry.The nearly 4 year Pan-STARRS1 Science Mission has now completed. The reprocessing of the entire data set is underway. The Public Release of the entire image, catalog and metadata set of the PS1 Sky Surveys is scheduled for April 1, 2015 from the STScI MAST archive. It is expected that a great many more scientific results will come with community access to the data set.The Pan-STARRS1 Surveys have been made possible through contributions of the Institute for Astronomy of the University of Hawaii; the Max-Planck Society and its participating institutes: the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching; The Johns Hopkins University; Durham University; the University of Edinburgh; Queen's University Belfast; the Harvard-Smithsonian Center for Astrophysics, the Las Cumbres Observatory Global Telescope Network Incorporated; the National Central University of Taiwan; the Space Telescope

  10. Disseminated T-cell lymphoma in a bonobo (Pan paniscus).

    PubMed

    Gibson-Corley, Katherine N; Haynes, Joseph S

    2012-01-01

    Disseminated lymphoma was diagnosed in an 8-year-old male bonobo (Pan paniscus). The male bonobo presented with a 4-6 week history of dyspnea and facial swelling around the eyes; thoracic radiographs and computed tomography scan indicated a craniodorsal mediastinal soft tissue mass. Upon gross examination, there was a large, cream to white mass expanding the mediastinum and pericardial sac. The mass extended along the thoracic aorta and cranial vena cava, through the thoracic inlet, along and encircling the trachea, and bilaterally into the thyroid glands. Microscopically, neoplastic lymphocytes were present in the thymus, trachea, lungs, kidney, heart, and numerous other tissues. Immunohistochemical staining of neoplastic lymphocytes revealed diffuse immunoreactivity for cluster of differentiation (CD)3 indicating T-cell lymphoma. Routine viral screening was negative via polymerase chain reaction.

  11. Spontaneous tempo and rhythmic entrainment in a bonobo (Pan paniscus).

    PubMed

    Large, Edward W; Gray, Patricia M

    2015-11-01

    The emergence of speech and music in the human species represent major evolutionary transitions that enabled the use of complex, temporally structured acoustic signals to coordinate social interaction. While the fundamental capacity for temporal coordination with complex acoustic signals has been shown in a few distantly related species, the extent to which nonhuman primates exhibit sensitivity to auditory rhythms remains controversial. In Experiment 1, we assessed spontaneous motor tempo and tempo matching in a bonobo (Pan paniscus), in the context of a social drumming interaction. In Experiment 2, the bonobo spontaneously entrained and synchronized her drum strikes within a range around her spontaneous motor tempo. Our results are consistent with the hypothesis that the evolution of acoustic communication builds upon fundamental neurodynamic mechanisms that can be found in a wide range of species, and are recruited for social interactions.

  12. A Pan-GTPase Inhibitor as a Molecular Probe.

    PubMed

    Hong, Lin; Guo, Yuna; BasuRay, Soumik; Agola, Jacob O; Romero, Elsa; Simpson, Denise S; Schroeder, Chad E; Simons, Peter; Waller, Anna; Garcia, Matthew; Carter, Mark; Ursu, Oleg; Gouveia, Kristine; Golden, Jennifer E; Aubé, Jeffrey; Wandinger-Ness, Angela; Sklar, Larry A

    2015-01-01

    Overactive GTPases have often been linked to human diseases. The available inhibitors are limited and have not progressed far in clinical trials. We report here a first-in-class small molecule pan-GTPase inhibitor discovered from a high throughput screening campaign. The compound CID1067700 inhibits multiple GTPases in biochemical, cellular protein and protein interaction, as well as cellular functional assays. In the biochemical and protein interaction assays, representative GTPases from Rho, Ras, and Rab, the three most generic subfamilies of the GTPases, were probed, while in the functional assays, physiological processes regulated by each of the three subfamilies of the GTPases were examined. The chemical functionalities essential for the activity of the compound were identified through structural derivatization. The compound is validated as a useful molecular probe upon which GTPase-targeting inhibitors with drug potentials might be developed.

  13. [Cancer Genome Atlas Pan-cancer Analysis Project].

    PubMed

    Zhang, Kun; Wang, Hong

    2015-04-01

    Cancer can exhibit different forms depending on the site of origin, cell types, the different forms of genetic mutations which also affect cancer therapeutic effect. Although many genes have been demonstrated to change a direct result of the change in phenotype, however, many cancers lineage complex molecular mechanisms are still not fully elucidated. Therefore, The Cancer Genome Atlas (TCGA) Research Network analyzed a large human tumors, in order to find the molecular changes in DNA, RNA, protein and epigenetic level, The results contain a wealth of data provides us with an opportunity for common, personality and new ideas throughout the cancer lineages form a whole description. Pan-cancer genome program first compares the 12 kinds of cancer types. Analysis of different tumor molecular changes and their functions, will tell us how effective treatment method is applied to a similar phenotype of the tumor.

  14. SUSPECTED LYME BORRELIOSIS IN A CAPTIVE ADULT CHIMPANZEE (PAN TROGLODYTES).

    PubMed

    Wack, Allison N; Holland, Cynthia J; Lopez, Job E; Schwan, Tom G; Bronson, Ellen

    2015-06-01

    An 18-yr-old female captive-born chimpanzee (Pan troglodytes) presented with an intermittent history of inappetence, lethargy, and lower limb stiffness. No notable abnormalities were found on exam or complete blood cell count and serum biochemistry analysis. Serologic testing was strongly positive via indirect fluorescent antibody testing and Western blot for Borrelia burgdorferi. Treatment with doxycycline was initiated, and a clinical response was seen within 1 wk. Convalescent serum exhibited an eightfold increase in titer. Serologic testing was performed on several conspecifics with banked serum; while some low positive titers were present and presumed indicative of past exposure, no titer was elevated to the extent of the affected chimpanzee during its course of disease. To the authors' knowledge, this is the first report of suspected Lyme borreliosis in a great ape species, and the case originates from an area of the United States with a high incidence of human borreliosis.

  15. Fournier's gangrene syndrome in a chimpanzee (Pan troglodytes).

    PubMed

    Okeson, Danelle M; Marrow, Judilee; Carpenter, James W; Armbrust, Laura J; Ragsdale, John M; Klocke, Emily

    2010-03-01

    A 37-yr-old male chimpanzee (Pan troglodytes) was evaluated for intermittent diarrhea, scrotal swelling, and lethargy of 2 days duration. Physical examination revealed marked swelling of the scrotum and perineal tissues with mild pitting edema and crepitus. Computed tomography revealed a mixed gas and soft-tissue density extending from the caudal ventral subcutaneous tissues caudally to the scrotum and perineal tissues. Surgical exploration and castration were performed to establish drainage, and culture revealed a polymicrobial infection. A diagnosis of scrotal and fascial plane abscessation consistent with Fournier's gangrene was made. Although castration with open drainage was performed, the animal died 36 hr after surgery. Postmortem examination and histopathology revealed necrotizing fasciitis of the penis, vaginal tunic, and subcutaneous perineal and perianal tissues.

  16. The Photometric Classification Server of PanSTARRS1

    NASA Astrophysics Data System (ADS)

    Saglia, R. P.

    2008-12-01

    The Panoramic Survey Telescope and Rapid Response System 1 (PanSTARRS1) project is on his way to start science operations early 2009. In the next 3.5 years it will produce a grizy survey of 3/4 of the sky, 2 mag deeper than Sloan. The Photometric Classification Server is responsibile for the object classification as star, galaxy or quasar, based on multiband photometry. Accordingly, it t should also deliver accurate and timely stellar parameters or photometric redshifts. Several science projects rely on the output of the server, from transit planet search, to transient detections, the structure of the Milky Way, high redshift Quasars, galaxy evolution, cosmological shear, baryonic oscillations and galaxy cluster searches.

  17. Stellar Mass Radial Profiles of Pan-STARRS MDS Galaxies

    NASA Astrophysics Data System (ADS)

    Zheng, Zheng; Thilker, D. A.; Heckman, T. M.

    2013-01-01

    Six-band (ugrizy) surface brightness radial profiles are derived for a sample of 48 late-type face-on non-interacting nearby galaxies using the Pan-STARRS Medium Deep Survey stack imaging (grizy) and the CFHT deep u-band imaging data. The surface brightnesses are measured down to ~ 29-30 ABmag/arcsec^2. The SB radial profiles are then fed into the advanced SED fitting software MAGPHYS (da Cunha et al. 2008) to derive radial profiles of stellar mass surface density as well as other parameters, such as metallicity and star formation history. The output stellar mass surface density profiles can be classified into three types (single exponential, down-bending, and up-bending), which is consistent with the results of Polen & Trujillo (2006). But the up-bending profiles are more common than indicated in PT06.

  18. Modeling pan evaporation for Kuwait by multiple linear regression.

    PubMed

    Almedeij, Jaber

    2012-01-01

    Evaporation is an important parameter for many projects related to hydrology and water resources systems. This paper constitutes the first study conducted in Kuwait to obtain empirical relations for the estimation of daily and monthly pan evaporation as functions of available meteorological data of temperature, relative humidity, and wind speed. The data used here for the modeling are daily measurements of substantial continuity coverage, within a period of 17 years between January 1993 and December 2009, which can be considered representative of the desert climate of the urban zone of the country. Multiple linear regression technique is used with a procedure of variable selection for fitting the best model forms. The correlations of evaporation with temperature and relative humidity are also transformed in order to linearize the existing curvilinear patterns of the data by using power and exponential functions, respectively. The evaporation models suggested with the best variable combinations were shown to produce results that are in a reasonable agreement with observation values.

  19. New evidence on imitation in an enculturated chimpanzee (Pan troglodytes).

    PubMed

    Carrasco, Lara; Posada, Sandra; Colell, Montserrat

    2009-11-01

    Imitation in the great apes continues to be an active field of research and one that is not free of controversy. Several studies suggest that these species do not tend to match the motor movements of the model they observe, but try to achieve the same results using their own methods (emulation of results). In the studies reviewed, gestures have been used very infrequently outside an intraspecific communicative context to evaluate imitation. In fact, the imitation of gestural actions has been tested only in 4 individual great apes. This study assessed a chimpanzee's (Pan troglodytes) ability to imitate 52 actions in 4 categories. The levels of accuracy attained by the subject in her imitations exceeded those described in previous studies. Moreover, contrary to the idea defended in some articles, the subject seemed to find it easier to imitate gestures than actions with objects.

  20. Measurements of peroxyacetyl nitrate (PAN) and NO2 at the South Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Yeon, J.; Song, D.; Lee, J. S.; Rhee, T. S.; Park, K.; Lee, G.

    2014-12-01

    We measured peroxyacetyl nitrate (PAN) and NO2 in remote marine boundary area during the SHIPPO (Shipborne Pole to Pole Observation). The measurements were made on the R/V Araon from Christ church, New Zealand to Gwangyang, South Korea along the western Pacific Ocean from March 30th to April 25th, 2014. Both PAN and NO2 were analyzed every 2 minute by a fast chromatograph with luminol-based chemiluminescence detection. In order to improve their detection limits, random noise from PMT has been successfully reduced by ensembled chromatograms with every 30 samples. Additionally, we replaced Nylon membrane surface with reflective aluminum surface and applied the new Luminol solution, which enhanced the signals significantly with detection limits of 6 pptv and 40 ppbv for PAN and NO2, respectively. Average concentrations of PAN and NO2 were 8 pptv for PAN and 80 pptv for NO2 during the experiment. The back trajectory analysis showed that the directly influenced air masses from anthropogenic activities were rare except the latitudes higher than 20°N. Relatively good correlations between PAN and NO2 were consistently observed, while PAN and O3 were not clearly correlated except in the air masses recently originated from land masses.

  1. Groundwater evaporation from salt pans: Examples from the eastern Arabian Peninsula

    NASA Astrophysics Data System (ADS)

    Schulz, Stephan; Horovitz, Marcel; Rausch, Randolf; Michelsen, Nils; Mallast, Ulf; Köhne, Maximilian; Siebert, Christian; Schüth, Christoph; Al-Saud, Mohammed; Merz, Ralf

    2015-12-01

    The major groundwater resources of the Arabian Peninsula are stored in the large sedimentary basins in its eastern part. Evaporation from continental salt pans (playas) is an important process in water resources assessments of its upper principal aquifers - the Upper Mega Aquifer system - as it constitutes a significant sink. However, literature values on evaporation rates vary widely and usually report about coastal salt pans where seawater evaporation is assumed. The present study applies different methods to provide a comprehensive picture of groundwater evaporation from salt pans of the Upper Mega Aquifer system. A remote sensing approach provided the spatial distribution and total salt pan area of about 36,500 km2. Hydrochemical and isotopic investigations revealed that from about 10% (3600 km2 ± 1600 km2) of the mapped salt pan area seawater evaporates. To estimate the groundwater evaporation rate from continental salt pans a laboratory column experiment was set up, implying a mean annual evaporation rate of about 42 mm ± 13 mm. In-situ analysis of water table fluctuations in the field suggested about 3 mm a-1 originate from recently infiltrated rainwater leading to an annual net groundwater evaporation of 39 mm ± 13 mm. Relating this number to the mapped salt pan area, from which groundwater evaporates, provides a total annual groundwater loss of 1.3 km3 ± 0.5 km3 for the Upper Mega Aquifer system.

  2. A Fast Response Ammonia Sensor Based on Coaxial PPy–PAN Nanofiber Yarn

    PubMed Central

    Liu, Penghong; Wu, Shaohua; Zhang, Yue; Zhang, Hongnan; Qin, Xiaohong

    2016-01-01

    Highly orientated polypyrrole (PPy)–coated polyacrylonitrile (PAN) (PPy–PAN) nanofiber yarn was prepared with an electrospinning technique and in-situ chemical polymerization. The morphology and chemical structure of PPy–PAN nanofiber yarn was characterized by scanning electron microscopy (SEM), field emission scanning electron microscopy (FESEM), transmission electron microscopy (TEM), and fourier transform infrared spectroscopy (FTIR), which indicated that the PPy as the shell layer was homogeneously and uniformly polymerized on the surface of PAN nanofiber. The effects of different concentration of doping acid on the responses of PPy–PAN nanofiber yarn sensor were investigated. The electrical responses of the gas sensor based on the PPy–PAN nanofiber yarn to ammonia were investigated at room temperature. The nanoyarn sensor composed of uniaxially aligned PPy–PAN nanofibers with a one-dimensional structure exhibited a transient response, and the response time was less than 1 s. The excellent sensing properties mentioned above give rise to good potential application prospects in the field of ammonia sensor. PMID:28335248

  3. Synthesis and characterization of multiwalled CNT-PAN based composite carbon nanofibers via electrospinning.

    PubMed

    Kaur, Narinder; Kumar, Vipin; Dhakate, Sanjay R

    2016-01-01

    Electrospun fibrous membranes find place in diverse applications like sensors, filters, fuel cell membranes, scaffolds for tissue engineering, organic electronics etc. The objectives of present work are to electrospun polyacrylonitrile (PAN) nanofibers and PAN-CNT nanocomposite nanofibers and convert into carbon nanofiber and carbon-CNT composite nanofiber. The work was divided into two parts, development of nanofibers and composite nanofiber. The PAN nanofibers were produced from 9 wt% PAN solution by electrospinning technique. In another case PAN-CNT composite nanofibers were developed from different concentrations of MWCNTs (1-3 wt%) in 9 wt% PAN solution by electrospinning. Both types of nanofibers were undergone through oxidation, stabilization, carbonization and graphitization. At each stage of processing of carbon and carbon-CNT composite nanofibers were characterized by SEM, AFM, TGA and XRD. It was observed that diameter of nanofiber varies with processing parameters such as applied voltage tip to collector distance, flow rate of solution and polymer concentrations etc. while in case of PAN-CNT composite nanofiber diameter decreases with increasing concentration of CNT in PAN solution. Also with stabilization, carbonization and graphitization diameter of nanofiber decreases. SEM images shows that the minimum fiber diameter in case of 3 wt% of CNT solution because as viscosity increases it reduces the phase separation of PAN and solvent and as a consequence increases in the fiber diameter. AFM images shows that surface of film is irregular which give idea about mat type orientation of fibers. XRD results show that degree of graphitization increases on increasing CNT concentration because of additional stresses exerting on the nanofiber surface in the immediate vicinity of CNTs. TGA results shows wt loss decreases as CNT concentration increases in fibers.

  4. PD2P: PanDA Dynamic Data Placement for ATLAS

    NASA Astrophysics Data System (ADS)

    Maeno, T.; De, K.; Panitkin, S.

    2012-12-01

    The PanDA (Production and Distributed Analysis) system plays a key role in the ATLAS distributed computing infrastructure. PanDA is the ATLAS workload management system for processing all Monte-Carlo (MC) simulation and data reprocessing jobs in addition to user and group analysis jobs. The PanDA Dynamic Data Placement (PD2P) system has been developed to cope with difficulties of data placement for ATLAS. We will describe the design of the new system, its performance during the past year of data taking, dramatic improvements it has brought about in the efficient use of storage and processing resources, and plans for the future.

  5. PanViz: interactive visualization of the structure of functionally annotated pangenomes.

    PubMed

    Pedersen, Thomas Lin; Nookaew, Intawat; Wayne Ussery, David; Månsson, Maria

    2017-01-05

    PanViz is a novel, interactive, visualization tool for pangenome analysis. PanViz allows visualization of changes in gene group (groups of similar genes across genomes) classification as different subsets of pangenomes are selected, as well as comparisons of individual genomes to pangenomes with gene ontology based navigation of gene groups. Furthermore it allows for rich and complex visual querying of gene groups in the pangenome. PanViz visualizations require no external programs and are easily sharable, allowing for rapid pangenome analyses.

  6. PD2P: PanDA Dynamic Data Placement for ATLAS

    SciTech Connect

    Maeno, T.; De, K.; Panitkin, S.

    2012-12-13

    The PanDA (Production and Distributed Analysis) system plays a key role in the ATLAS distributed computing infrastructure. PanDA is the ATLAS workload management system for processing all Monte-Carlo (MC) simulation and data reprocessing jobs in addition to user and group analysis jobs. The PanDA Dynamic Data Placement (PD2P) system has been developed to cope with difficulties of data placement for ATLAS. We will describe the design of the new system, its performance during the past year of data taking, dramatic improvements it has brought about in the efficient use of storage and processing resources, and plans for the future.

  7. The PanK2 Genes of Mouse and Human Specify Proteins with DistinctSubcellular Locations

    SciTech Connect

    Leonardi, Roberta; Zhang, Yong-Mei; Lydikis, Athanasios; Stevens,Robert D.; Ilkayeva, Olga R.; Wenner, Brett R.; Bain, James R.; Newgard,Christopher B.; Rock, Charles O.; Jackowski, Suzanne

    2007-05-01

    Coenzyme A (CoA) biosynthesis is initiated by pantothenatekinase (PanK) and CoA levels are controlled through differentialexpression and feedback regulation of PanK isoforms. PanK2 is amitochondrial protein in humans, but comparative genomics revealed thatacquisition of a mitochondrial targeting signal was limited to primates.Human and mouse PanK2 possessed similar biochemical properties, withinhibition by acetylCoA and activation by palmitoylcarnitine. Mouse PanK2localized in the cytosol, and the expression of PanK2 was higher in humanbrain compared to mouse brain. Differences in expression and subcellularlocalization should be considered in developing a mouse model for humanPanK2 deficiency. (c) 2007 Federation of European Biochemical Societies.Published by Elsevier B.V.

  8. The Structure of the PanD/PanZ Protein Complex Reveals Negative Feedback Regulation of Pantothenate Biosynthesis by Coenzyme A

    PubMed Central

    Monteiro, Diana C.F.; Patel, Vijay; Bartlett, Christopher P.; Nozaki, Shingo; Grant, Thomas D.; Gowdy, James A.; Thompson, Gary S.; Kalverda, Arnout P.; Snell, Edward H.; Niki, Hironori; Pearson, Arwen R.; Webb, Michael E.

    2015-01-01

    Summary Coenzyme A (CoA) is an ubiquitous and essential cofactor, synthesized from the precursor pantothenate. Vitamin biosynthetic pathways are normally tightly regulated, including the pathway from pantothenate to CoA. However, no regulation of pantothenate biosynthesis has been identified. We have recently described an additional component in the pantothenate biosynthetic pathway, PanZ, which promotes the activation of the zymogen, PanD, to form aspartate α-decarboxylase (ADC) in a CoA-dependent manner. Here we report the structure of PanZ in complex with PanD, which reveals the structural basis for the CoA dependence of this interaction and activation. In addition, we show that PanZ acts as a CoA-dependent inhibitor of ADC catalysis. This inhibitory effect can effectively regulate the biosynthetic pathway to pantothenate, and thereby also regulate CoA biosynthesis. This represents a previously unobserved mode of metabolic regulation whereby a cofactor-utilizing protein negatively regulates the biosynthesis of the same cofactor. PMID:25910242

  9. Pair of bollards and remnant seawall of Pan American Airways/Naval ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Pair of bollards and remnant seawall of Pan American Airways/Naval Air Transport Service/destroyer base site. View facing north. - U.S. Naval Base, Pearl Harbor, Pearl City Peninsula, Pearl City, Honolulu County, HI

  10. Pan American Airways/Naval Air Transport Service/destroyer base site showing stone ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Pan American Airways/Naval Air Transport Service/destroyer base site showing stone wall around patio. View facing east-southeast. - U.S. Naval Base, Pearl Harbor, Pearl City Peninsula, Pearl City, Honolulu County, HI

  11. Pan American Airways/Naval Air Transport Service/destroyer base site showing brick ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Pan American Airways/Naval Air Transport Service/destroyer base site showing brick and concrete paving of patio, and circular planters. View facing east. - U.S. Naval Base, Pearl Harbor, Pearl City Peninsula, Pearl City, Honolulu County, HI

  12. Form gene clustering method about pan-ethnic-group products based on emotional semantic

    NASA Astrophysics Data System (ADS)

    Chen, Dengkai; Ding, Jingjing; Gao, Minzhuo; Ma, Danping; Liu, Donghui

    2016-09-01

    The use of pan-ethnic-group products form knowledge primarily depends on a designer's subjective experience without user participation. The majority of studies primarily focus on the detection of the perceptual demands of consumers from the target product category. A pan-ethnic-group products form gene clustering method based on emotional semantic is constructed. Consumers' perceptual images of the pan-ethnic-group products are obtained by means of product form gene extraction and coding and computer aided product form clustering technology. A case of form gene clustering about the typical pan-ethnic-group products is investigated which indicates that the method is feasible. This paper opens up a new direction for the future development of product form design which improves the agility of product design process in the era of Industry 4.0.

  13. Rapid Eye Movement Sleep Abnormalities in Children with Pediatric Acute-Onset Neuropsychiatric Syndrome (PANS)

    PubMed Central

    Gaughan, Thomas; Buckley, Ashura; Hommer, Rebecca; Grant, Paul; Williams, Kyle; Leckman, James F.; Swedo, Susan E.

    2016-01-01

    Study Objectives: Polysomnographic investigation of sleep architecture in children presenting with pediatric acute-onset neuropsychiatric syndrome (PANS). Methods: Fifteen consecutive subjects meeting criteria for PANS (mean age = 7.2 y; range 3–10 y) underwent single-night full polysomnography (PSG) read by a pediatric neurologist. Results: Thirteen of 15 subjects (87%) had abnormalities detected with PSG. Twelve of 15 had evidence of rapid eye movement (REM) sleep motor disinhibition, as characterized by excessive movement, laughing, hand stereotypies, moaning, or the continuation of periodic limb movements during sleep (PLMS) into REM sleep. Conclusions: This study shows various forms of REM sleep motor disinhibition present in a population of children with PANS. Citation: Gaughan T, Buckley A, Hommer R, Grant P; Williams K, Leckman JF, Swedo SE. Rapid eye movement sleep abnormalities in children with pediatric acute-onset neuropsychiatric syndrome (PANS). J Clin Sleep Med 2016;12(7):1027–1032. PMID:27166296

  14. Diagnostic sea ice predictability in the pan-Arctic and U.S. Arctic regional seas

    NASA Astrophysics Data System (ADS)

    Cheng, Wei; Blanchard-Wrigglesworth, Edward; Bitz, Cecilia M.; Ladd, Carol; Stabeno, Phyllis J.

    2016-11-01

    This study assesses sea ice predictability in the pan-Arctic and U.S. Arctic regional (Bering, Chukchi, and Beaufort) seas with a purpose of understanding regional differences from the pan-Arctic perspective and how predictability might change under changing climate. Lagged correlation is derived using existing output from the Community Earth System Model Large Ensemble (CESM-LE), Pan-Arctic Ice-Ocean Modeling and Assimilation System, and NOAA Coupled Forecast System Reanalysis models. While qualitatively similar, quantitative differences exist in Arctic ice area lagged correlation in models with or without data assimilation. On regional scales, modeled ice area lagged correlations are strongly location and season dependent. A robust feature in the CESM-LE is that the pan-Arctic melt-to-freeze season ice area memory intensifies, whereas the freeze-to-melt season memory weakens as climate warms, but there are across-region variations in the sea ice predictability changes with changing climate.

  15. A new two-Dimensional Physical Basis for the Complementary Relation Between Terrestrial and pan Evaporation

    NASA Astrophysics Data System (ADS)

    Pettijohn, J. C.; Salvucci, G. D.

    2008-12-01

    Archived global measurements of water loss from evaporation pans constitute an important indirect measure of evaporative flux. Historical data from evaporation pans shows a decreasing trend over the last half century, but the relationship between pan evaporation and moisture-limited terrestrial evaporation is complex, leading to ambiguities in the interpretation of this data. Under energy-limited conditions, pan evaporation (Epan) and moisture-limited terrestrial evaporation (E) increase or decrease together, while in moisture- limited conditions these fluxes form a complementary relation in which increases in one rate accompany decreases in the other. This has lead to debate about the meaning of the observed trends in the context of changing climate. Here a two-dimensional numerical model of a wet pan in a drying landscape is used to demonstrate that, over a wide range of realistic atmospheric and surface conditions, the influence that changes in E have on Epan (1) are complementary and linear, (2) do not depend upon surface wind speed, and (3) are strikingly asymmetrical, in that a unit decrease in E causes approximately a five-fold increase in Epan, as found in a recent analysis of daily evaporation from US grasslands (Kahler and Brutsaert, 2006). Previous attempts to explain the CR have been based on one dimensional diffusion and energy balance arguments, leading to analytic solutions based on Penman-type bulk difference equations. But without acknowledging the spatially complex multidimensional humidity and temperature field around the pan, and specifically how these fields change as the contrast between the wet pan and the drying land surface increases, such integrated bulk difference equations are a priori incomplete (they ignore important divergence terms), and thus these explanations must be considered physically incomplete. Results of the present study improve the theoretical foundation of the CR, thus increasing the reliability with which it can be

  16. PAN-DA and beyond: Data acquisition for the next generation experiments

    SciTech Connect

    Pordes, R.; Anderson, J.; Berg, D.; Berman, E.; Brown, D.; Dorries, T.; Mackinnon, B.; Meadows, J.; Moore, C.; Nicinski, T.; Oleynik, G.; Petravick, D.; Rechenmacher, R.; Sergey, G.; Slimmer, D.; Streets, J.; Vittone, M.; Votava, M.; Wilcer, N.; White, V.

    1991-06-01

    We report on the status of the PAN-DA data acquisition system presented at the last Real Time Conference. Since that time, PAN-DA has been successfully used in the fixed target program at Fermilab. We also report on the plans and strategies for development of a new data acquisition system for the next generation of fixed target experiments at Fermilab. 10 refs., 3 figs.

  17. Gravity and solidity in four great ape species (Gorilla gorilla, Pongo pygmaeus, Pan troglodytes, Pan paniscus): vertical and horizontal variations of the table task.

    PubMed

    Cacchione, Trix; Call, Josep; Zingg, Robert

    2009-05-01

    Three experiments modeled after infant studies were run on four great ape species (Gorilla gorilla, Pongo pygmaeus, Pan troglodytes, Pan paniscus) to investigate their reasoning about solidity and gravity constraints. The aims were: (a) to find out if great apes are subject to gravity biased search or display sensitivity for object solidity, (b) to check for species differences, and (c) to assess if a gravity hypothesis or more parsimonious explanations best account for failures observed. Results indicate that great apes, unlike monkeys, show no reliable gravity bias, that ape species slightly differ in terms of their performance, and that the errors made are best explained by a gravity account.

  18. Membrane permeabilization of colistin toward pan-drug resistant Gram-negative isolates.

    PubMed

    Mohamed, Yasmine Fathy; Abou-Shleib, Hamida Moustafa; Khalil, Amal Mohamed; El-Guink, Nadia Mohamed; El-Nakeeb, Moustafa Ahmed

    2016-01-01

    Pan-drug resistant Gram-negative bacteria, being resistant to most available antibiotics, represent a huge threat to the medical community. Colistin is considered the last therapeutic option for patients in hospital settings. Thus, we were concerned in this study to demonstrate the membrane permeabilizing activity of colistin focusing on investigating its efficiency toward those pan-drug resistant isolates which represent a critical situation. We determined the killing dynamics of colistin against pan-drug resistant isolates. The permeability alteration was confirmed by different techniques as: leakage, electron microscopy and construction of an artificial membrane model; liposomes. Moreover, selectivity of colistin against microbial cells was also elucidated. Colistin was proved to be rapid bactericidal against pan-drug resistant isolates. It interacts with the outer bacterial membrane leading to deformation of its outline, pore formation, leakage of internal contents, cell lysis and finally death. Furthermore, variations in membrane composition of eukaryotic and microbial cells provide a key for colistin selectivity toward bacterial cells. Colistin selectively alters membrane permeability of pan-drug resistant isolates which leads to cell lysis. Colistin was proved to be an efficient last line treatment for pan-drug resistant infections which are hard to treat.

  19. An investigation of electrochemomechanical actuation of conductive Polyacrylonitrile (PAN) nanofiber composites

    NASA Astrophysics Data System (ADS)

    Gonzalez, Mark A.; Walter, Wayne W.

    2014-03-01

    A polymer-based nanofiber composite actuator designed for contractile actuation was fabricated by electrospinning, stimulated by electrolysis, and characterized by electrochemical and mechanical testing to address performance limitations and understand the activation processing effects on actuation performance. Currently, Electroactive polymers (EAPs) have provided uses in sensory and actuation technology, but have either low force output or expand rather than contract, falling short in capturing the natural kinetics and mechanics of muscle needed to provide breakthroughs in the bio-medical and robotic fields. In this study, activated Polyacrylonitrile (PAN) fibers have demonstrated biomimetic functionalities similar to the sarcomere contraction responsible for muscle function. Activated PAN has also been shown to contract and expand by electrolysis when in close vicinity to the anode and cathode, respectively. PAN nanofibers (~500 nm) especially show faster response to changes in environmental pH and improved mechanical properties compared to larger diameter fibers. Tensile testing was conducted to examine changes in mechanical properties between annealing and hydrolysis processing. Voltage driven transient effects of localized pH were examined to address pHdefined actuation thresholds of PAN fibers. Electrochemical contraction rates of the PAN/Graphite composite actuator demonstrated up to 25%/min. Strains of 58.8%, ultimate stresses up to 77.1 MPa, and moduli of 0.21 MPa were achieved with pure PAN nanofiber mats, surpassing mechanical properties of natural muscles. Further improvements, however, to contraction rates and Young's moduli were found essential to capture the function and performance of skeletal muscles appropriately.

  20. Smart Polyacrylonitrile (PAN) Nanofibers with Thermal Energy Storage and Retrieval Functionality

    NASA Astrophysics Data System (ADS)

    Cherry, De'Andre James

    Phase change materials (PCMs) are generally substances with a high heat of fusion in the process of solid to liquid phase change. The nature of PCMs make them efficient materials to store and retrieve large amounts of thermal energy. Presently, high efficiency thermal energy storage/retrieval in applications where flexibility and space saving are required, such as smart textiles, still remains as a challenge. In this study, lauric acid (LA) and myristic acid (MA) were combined to prepare a specific binary fatty acid eutectic (LA-MA) with a melting point near the operating body temperature of a human being and then encapsulated in polyacrylonitrile (PAN) nanofibers through the electrospinning technique. Functionalized PCM-enhanced PAN nanofibers containing LA-MA at 30%, 50%, 70% and 100% of the weight of the PAN were successfully synthesized. The morphological structures and thermal energy storage capacity of the PCM-enhanced PAN nanofibers were characterized by electron microscopy (EM) and differential scanning calorimetry (DSC). The novel PCM-enhanced PAN nanofibers maintained their cylindrical fiber morphology after multiple heating-cooling cycles and retained their latent heat storage functionality. Thus, it is envisioned that the prepared PCM-enhanced PAN nanofibers will find use in applications such as smart textiles where temperature regulation functionality is required.

  1. Methodology for the analysis of peroxyacetyl nitrate (PAN) in the unpolluted atmosphere

    NASA Astrophysics Data System (ADS)

    Singh, H. B.; Salas, L. J.

    A light weight electron capture gas chromatograph has been laboratory- and field-tested to conduct surface and airborne PAN measurements in the unpolluted troposphere. A dynamic calibration system based on CH3CHO/NO2/Cl2 photolysis studies by Gay et al. (1976) was constructed and successfully tested. A sensitivity of 5 parts per trillion (ppt) and an overall accuracy of + or - 20 percent is estimated. It is shown that gas phase coulometry (GPC) is unsuited for absolute PAN analysis -principally, because a significant fraction of PAN is destroyed prior to coulometric detection. PAN measurements at a marine Pacific site, and aboard an aircraft, show that PAN is always present at a concentration range of 10-100 ppt, although concentrations as high as 400 ppt were measured at an altitude of 4.6 km over the Pacific Ocean. Surface PAN measurements at a Pacific marine site indicate a distinct diurnal behavior, tentatively attributed to photochemistry involving alkenes, alkanes and NOx.

  2. Capillary gas chromatographic analysis of nitrogen dioxide and pans with luminol chemiluminescent detection.

    SciTech Connect

    Gaffney, J. S.; Bornick, R. M.; Chen, Y.-H.; Marley, N. A.; Environmental Research

    1998-01-01

    Peroxyacyl nitrates (PANs) and nitrogen dioxide are important atmospheric air pollutants in the troposphere. These atmospheric nitrogen species are strongly coupled chemically by a clearly temperature-dependent equilibrium in the troposphere. A chemical method that can measure both nitrogen dioxide and PANs rapidly and with sub-part-per-billion detection is described that is based upon a modified luminol detection system coupled to a capillary gas chromatographic column by using helium as a carrier. The system can readily separate and detect nitrogen dioxide, peroxyacetyl nitrate, peroxyproprionyl nitrate, and peroxybutyrl nitrate with detection limits in the low tens of parts per trillion with total analysis time of less than 1 min. Calibration of PAN by thermal decomposition to nitrogen dioxide is demonstrated with PAN detection sensitivities approximately 75% of the sensitivities observed for NO2 luminol detection by using helium as a carrier gas. The advantages of this method for simultaneous measurement of nitrogen dioxide and PANs over ozone chemiluminescent detection and electron capture detection are discussed, as well as potential applications of this method for heterogeneous surface chemistry studies of PANs and nitrogen dioxide and for tropospheric measurements.

  3. RPAN: rice pan-genome browser for ∼3000 rice genomes

    PubMed Central

    Sun, Chen; Hu, Zhiqiang; Zheng, Tianqing; Lu, Kuangchen; Zhao, Yue; Wang, Wensheng; Shi, Jianxin; Wang, Chunchao; Lu, Jinyuan; Zhang, Dabing; Li, Zhikang; Wei, Chaochun

    2017-01-01

    A pan-genome is the union of the gene sets of all the individuals of a clade or a species and it provides a new dimension of genome complexity with the presence/absence variations (PAVs) of genes among these genomes. With the progress of sequencing technologies, pan-genome study is becoming affordable for eukaryotes with large-sized genomes. The Asian cultivated rice, Oryza sativa L., is one of the major food sources for the world and a model organism in plant biology. Recently, the 3000 Rice Genome Project (3K RGP) sequenced more than 3000 rice genomes with a mean sequencing depth of 14.3×, which provided a tremendous resource for rice research. In this paper, we present a genome browser, Rice Pan-genome Browser (RPAN), as a tool to search and visualize the rice pan-genome derived from 3K RGP. RPAN contains a database of the basic information of 3010 rice accessions, including genomic sequences, gene annotations, PAV information and gene expression data of the rice pan-genome. At least 12 000 novel genes absent in the reference genome were included. RPAN also provides multiple search and visualization functions. RPAN can be a rich resource for rice biology and rice breeding. It is available at http://cgm.sjtu.edu.cn/3kricedb/ or http://www.rmbreeding.cn/pan3k. PMID:27940610

  4. Pan-organ transcriptome variation across 21 cancer types

    PubMed Central

    Li, Xiaofen; Zheng, Shu

    2017-01-01

    It is widely accepted that some messenger RNAs are evolutionarily conserved across species, both in sequence and tissue-expression specificity. To date, however, little effort has been made to exploit the transcriptome divergence between cancer and adjacent normal tissue at the pan-organ level. In this work, a transcriptome sequencing dataset from 675 normal-tumor pairs, representing 21 solid organs in The Cancer Genome Atlas, is used to evaluate expression evolution. The results show that in most cancer types, gene expression divergence and organ-specificity are reduced in cancer tissue compared to adjacent normal tissue. Furthermore, we observe that all cancers share cell cycle dysregulation through interrogating differentially expressed protein coding genes. Meanwhile, weighted correlation network analysis is used to detect of the gene module structure variation between cancer and adjacent normal tissue. And modules consisting of tightly co-regulated genes in cancer change substantially compared with those in adjacent normal tissue. We thus assume that the destruction of a coordinated regulatory network might result in tumorigenesis and tumor progression. Our results provide new insights into the complex cancer biology and shed light on the mysterious regulation mode for cancer. PMID:28036280

  5. Bonobos (Pan paniscus) vocally protest against violations of social expectations.

    PubMed

    Clay, Zanna; Ravaux, Lucie; de Waal, Frans B M; Zuberbühler, Klaus

    2016-02-01

    Research has shown that great apes possess certain expectations about social regularities and both perceive and act according to social rules within their group. During natural and experimentally induced contexts, such as the inequitable distribution of resources, individuals also show protesting behaviors when their expectations about a social situation are violated. Despite broad interest in this topic, systematic research examining the nature of these expectations and the communicative signals individuals use to express them remains scant. Here, we addressed this by exploring whether bonobos (Pan paniscus) respond to violations of social expectations in naturally occurring social interactions, focusing on the vocal behavior of victims following socially expected and unexpected aggression. Expected aggression included conflicts over a contested resource and conflicts that were provoked by the victim. Unexpected aggression was any spontaneous, unprovoked hostility toward the victim. For each conflict, we also determined its severity and the composition of the nearby audience. We found that the acoustic and temporal structure of victim screams was individually distinct and varied significantly depending on whether or not aggression could be socially predicted. Certain acoustic parameters also varied as a function of conflict severity, but unlike social expectation, conflict severity did not discriminate scream acoustic structure overall. We found no effect of audience composition. We concluded that, beyond the physical nature of a conflict, bonobos possess certain social expectations about how they should be treated and will publicly protest with acoustically distinctive vocal signals if these expectations are violated.

  6. Social structures in Pan paniscus: testing the female bonding hypothesis.

    PubMed

    Stevens, Jeroen M G; Vervaecke, Hilde; De Vries, Han; Van Elsacker, Linda

    2006-07-01

    Based on previous research in captivity, bonobos, Pan paniscus, have been called a female-bonded species. However, genetic and behavioural data indicate that wild females migrate. Bonding between these unrelated females would then be in contradiction with socio-ecological models. It has been argued that female bonding has been overemphasized in captive bonobos. We examine patterns of proximity, grooming and support behaviour in six well established captive groups of bonobos. We find that female bonding was not a typical characteristic of all captive bonobo groups. In only two groups there was a trend for females to prefer proximity with other females over association with males. We found no evidence that following or grooming between females was more frequent than between males and unrelated females or between males. Only in coalitions, females supported each other more than male-female or male-male dyads. We also investigated five mother-son pairs. Grooming was more frequent among mothers and sons than in any other dyad, but sons did not groom their mothers more than males groomed unrelated females. Mothers groomed their sons, or provided more support to them than females groomed or supported unrelated males. Thus, while bonds between females were clearly present, intersexual relations between males and either unrelated females or their mothers are of more, or equal importance.

  7. Gestural communication in subadult bonobos (Pan paniscus): repertoire and use.

    PubMed

    Pika, Simone; Liebal, Katja; Tomasello, Michael

    2005-01-01

    This article aims to provide an inventory of the communicative gestures used by bonobos (Pan paniscus), based on observations of subadult bonobos and descriptions of gestural signals and similar behaviors in wild and captive bonobo groups. In addition, we focus on the underlying processes of social cognition, including learning mechanisms and flexibility of gesture use (such as adjustment to the attentional state of the recipient). The subjects were seven bonobos, aged 1-8 years, living in two different groups in captivity. Twenty distinct gestures (one auditory, eight tactile, and 11 visual) were recorded. We found individual differences and similar degrees of concordance of the gestural repertoires between and within groups, which provide evidence that ontogenetic ritualization is the main learning process involved. There is suggestive evidence, however, that some form of social learning may be responsible for the acquisition of special gestures. Overall, the present study establishes that the gestural repertoire of bonobos can be characterized as flexible and adapted to various communicative circumstances, including the attentional state of the recipient. Differences from and similarities to the other African ape species are discussed.

  8. Pan-STARRS1: Status, Science, and Public Data Release

    NASA Astrophysics Data System (ADS)

    Chambers, Kenneth C.

    2013-01-01

    PS1, the Pan-STARRS1 Telescope is entering its third year of operations. Operations of the PS1 System include the Observatory, Telescope, 1.4 Gigapixel Camera, Image Processing Pipeline , PSPS relational database and reduced science product software servers. The PS1 Surveys include: (1) A 3pi Steradian Survey, (2) A Medium Deep survey of 10 PS1 footprints spaced around the sky; (3) A solar system survey optimized for Near Earth Objects, (4) a Stellar Transit Survey; and (5) a Deep Survey of M31. The PS1 3pi Survey has now covered most of the sky north of dec=-30 with 8 to 10 visits in five bands: g,r,i,z and y or over ~45 epochs per point on sky. The performance of the PS1 system, sky coverage, cadence, and data quality of the surveys will be presented as well as progress in reprocessing of the data taken to date and plans for serving the data to the public. A summary of science highlights will be included. The PS1 Science Consortium consists of The Institute for Astronomy at the University of Hawai'i in Manoa, the Max Planck Institute for Astronomy, Heidelberg and the Max Planck Institute for Extraterrestrial Physics, Garching, The Johns Hopkins University, the University of Durham, the University of Edinburgh, the Queen's University Belfast, the Harvard-Smithsonian Center for Astrophysics, the Los Cumbres Observatory Global Telescope Network Incorporated, and the National Central University of Taiwan, NASA, and NSF.

  9. Comparitive Astrometry with Kodak Type 4415 Tech Pan Film

    NASA Astrophysics Data System (ADS)

    Ianna, P. A.; Martin, J. C.

    1994-12-01

    With the demise of many commonly used Kodak Spectroscopic Plates attention has been directed toward alternative Kodak photographic materials for astronomical applications. Estar-based Kodak Type 4415 Tech Pan film is an attractive product owing to its very fine grain, ease of hypersensitization, excellent storage potential after hypering, and cost one tenth that of plates. We have endeavored to compare the relative astrometric precision of 4415 film and IIIaF plates. As nearly identical conditions as possible were maintained at each stage of the comparisons. Both film and plate were exposed in contact with the same GG495 filter, alternating film/plate exposures to approximately same limiting magnitude, and minimizing hour angle differences. Exposures from each night were developed in one darkroom session. The photographs were measured with our PDS 1010GM, the film emulsion side up held flat by the plate emulsion side down. Three film/plate pairs from the McCormick refractor and five film/plate pairs with the Fan 1 m reflector were used with ten stars in each comparison. We found standard errors for a single position to be +/- 0.76 microns for the 4415 film and +/- 0.21 microns for the IIIa-F glass plates. Further long-term comparisons are planned. This work is supported by the National Science Foundation and the Estate of Leander J. McCormick

  10. Becoming a peter pan: omnipotence, dependency and the Ferenczian child.

    PubMed

    Bar-Haim, Shaul

    2015-03-01

    The aim of this paper is to provide a short history of the changes in Ferenczi's concept of early childhood, during the two decade period, 1913-1932. Initially, Ferenczi mainly emphasized children's feelings of omnipotence, which enable them to perceive themselves as strong, independent and capable human beings. By the mid-1920s, however, he felt that his earlier work did not give a good account of what comes after the stage of omnipotence, and that it did not adequately describe the difficulties in the transition from pleasure to reality principles. However, in his Clinical Diary, Ferenczi became fully aware of how fragile and insecure children are, and therefore how dangerous-yet necessary-it is for them to abandon the "stage of omnipotence" and to gain a "sense of reality". For Ferenczi, traumatized children are children who had not been loved in their early childhood, and therefore could not develop the capacity to make the journey from pleasure principle to that of reality. It will be suggested that a paradigmatic example for this kind of child is Peter Pan.

  11. Pan Genome of the Phytoplankton Emiliania Underpins its Global Distribution

    SciTech Connect

    Read, Betsy A.; Kegel, Jessica; Klute, Mary J.; Kuo, Alan; Lefebvre, Stephane C.; Maumus, Florian; Mayer, Christoph; Miller, John; Monier, Adam; Salamov, Asaf; Young, Jeremy; Aguilar, Maria; Claverie, Jean-Michel; Frickenhaus, Stephan; Gonzalez, Karina; Herman, Emily K.; Lin, Yao-Cheng; Napier, Johnathan; Ogata, Hiroyuki; Sarno, Analissa F.; Schmutz, Jeremy; Schroeder, Declan; de Vargas, Columban; Verret, Frederic; von Dassow, Peter; Valentin, Klaus; Van de Peer, Yves; Wheeler, Glen; Annotation Consortium, Emiliania huxleyi; Dacks, Joel B.; Delwiche, Charles F.; Dyhrman, Sonya T.; Glockner, Gernot; John, Uwe; Richards, Thomas; Worden, Alexandra Z.; Zhang, Xiaoyu; Grigoriev, Igor V.

    2012-06-18

    Coccolithophores have influenced the global climate for over 200 million years1. These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems2. They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering themvisible fromspace3.Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO2 production or uptake, sequestration and export to the deep ocean4. Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate thatE. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions.

  12. Placentophagy in wild chimpanzees (Pan troglodytes verus) at Bossou, Guinea.

    PubMed

    Fujisawa, Michiko; Hockings, Kimberley J; Soumah, Aly Gaspard; Matsuzawa, Tetsuro

    2016-04-01

    Despite intensive observation of nonhuman great apes during long-term field studies, observations of great ape births in the wild are rare. Research on wild chimpanzees (Pan troglodytes verus) at Bossou in the Republic of Guinea has been ongoing for 35 years, yet chimpanzee parturitions have been observed on only two occasions. Here we provide information regarding both chimpanzee births, with detailed information from the close observation of one. During this birth, the mother built a day nest in a tree before parturition. After giving birth, the mother consumed the placenta, and the other chimpanzees in her party gathered near her and her neonate. However, she did not share the placenta, and consumed it all herself. In the second observation, the mother also built a nest in a tree and subsequently gave birth. Thereafter, she shared the placenta with some individuals and consumed part of the placenta herself. Although maternal placentophagy is a ubiquitous behavior among the majority of non-human primates, observations of placenta sharing by wild primates are infrequent, and the proximate and ultimate explanations for the behavior remain unclear.

  13. Epiphyseal fusion in Pan troglodytes relative to dental age.

    PubMed

    Brimacombe, Conrad S; Kuykendall, Kevin L; Nystrom, Pia

    2015-05-01

    Previous studies on different aspects of chimpanzee growth and development have documented dental eruption and development, long bone and somatic growth, and to a lesser extent, skeletal fusion. Such data are useful in comparative and evolutionary studies of growth and some aspects of life history evolution in apes and early hominids. However, few studies have integrated dental development and other aspects of skeletal development, and none of these have been able to incorporate a large study sample. This study documents dental mineralization and skeletal epiphyseal fusion in a mixed-sex sample of 155 Pan troglodytes skeletons, and aims to: a) document the pattern of dental and skeletal developmental in chimpanzees; b) compare male and female developmental patterns in chimpanzees; and c) compare these chimpanzee developmental patterns to general patterns of dental and skeletal development in published human studies. The analysis of both dental and skeletal development in this sample demonstrates clearly that dental development is complete before the fusion of the many skeletal epiphyses, in contrast to the pattern observed in humans. Age estimates for individuals were calculated using previously published regression equations for dental development and used to estimate fusion ages. These appear to be accurate in that our estimates are similar to published ranges. These data improve our understanding about chimpanzee dental and skeletal development and provide a basis for further comparison between extant apes and humans, as well as those extinct species represented by fossil partial skeletons.

  14. Modeling Pan Evaporation for Kuwait by Multiple Linear Regression

    PubMed Central

    Almedeij, Jaber

    2012-01-01

    Evaporation is an important parameter for many projects related to hydrology and water resources systems. This paper constitutes the first study conducted in Kuwait to obtain empirical relations for the estimation of daily and monthly pan evaporation as functions of available meteorological data of temperature, relative humidity, and wind speed. The data used here for the modeling are daily measurements of substantial continuity coverage, within a period of 17 years between January 1993 and December 2009, which can be considered representative of the desert climate of the urban zone of the country. Multiple linear regression technique is used with a procedure of variable selection for fitting the best model forms. The correlations of evaporation with temperature and relative humidity are also transformed in order to linearize the existing curvilinear patterns of the data by using power and exponential functions, respectively. The evaporation models suggested with the best variable combinations were shown to produce results that are in a reasonable agreement with observation values. PMID:23226984

  15. The educational approach within Colombia's nutrition plan (PAN)

    NASA Astrophysics Data System (ADS)

    de Pizano, Julia Mejia

    1980-03-01

    With the knowledge that malnutrition affects the quality of life of an individual, the Colombian Government set up in 1976 a unique multi-sectorial plan (PAN), to combat the country's serious malnutrition. Government agencies and private industries in the sectors of production, distribution, health, sanitation, and education have coordinated their previously independent efforts. Among the interesting aspects are the coordination of sectors through work at various levels and through control of the budget, the limitation of bureaucracy, and the decentralization of decision-making. The ongoing attempts to overcome the difficulties encountered include making decisions in the face of inconclusive knowledge on what constitutes a well-balanced diet; combating the lack of knowledge of professionals about the environment of the poorest percentage of the population; and revising the traditional teaching method to make it more successful through a multi-media approach to assure wider coverage and more impact for the least cost, using materials such as games, puppets, posters and radio.

  16. Multi decadal glacier area fluctuations in Pan-Arctic

    NASA Astrophysics Data System (ADS)

    Mernild, S. H.; Malmros, J. K.

    2012-10-01

    The shrinking of land-terminating glaciers and ice caps (GIC) has been documented in high-latitude regions, even though repeat observations upon which to base such studies have been limited in space. Here, we present a new record of satellite-derived area changes for 321 land-terminating GIC throughout Pan-Arctic and for the W. Canada and W. US, with focus on the period from mid-1980s to late-2000s/2011 (the last ca. 25 yr). The mean shrinking rate was -0.06±0.01 km2 yr-1 during a period with climate warming. Most of the observed GIC shrank in area, more so than previously believed: while only 8% advanced. The analysis indicates that the observed GIC have lost an arithmetic average of one-fifth of their area since the mid-1980s (equal to a shrinking rate of ca. -1% yr-1), with the highest rate of loss of -40±4% (-1.7 % yr-1) in Alaska, and the lowest rate of loss of -12±3% (-0.5 % yr-1) in Arctic Russia.

  17. Maternal Behavior by Birth Order in Wild Chimpanzees (Pan troglodytes)

    PubMed Central

    Stanton, Margaret A.; Lonsdorf, Elizabeth V.; Pusey, Anne E.; Goodall, Jane; Murray, Carson M.

    2014-01-01

    Parental investment theory predicts that maternal resources are finite and allocated among offspring based on factors including maternal age and condition, and offspring sex and parity. Among humans, firstborn children are often considered to have an advantage and receive greater investment than their younger siblings. However, conflicting evidence for this “firstborn advantage” between modern and hunter-gatherer societies raises questions about the evolutionary history of differential parental investment and birth order. In contrast to humans, most non-human primate firstborns belong to young, inexperienced mothers and exhibit higher mortality than laterborns. In this study, we investigated differences in maternal investment and offspring outcomes based on birth order (firstborn vs. later-born) among wild chimpanzees (Pan troglodyte schweinfurthii). During the critical first year of life, primiparous mothers nursed, groomed, and played with their infants more than did multiparous mothers. Furthermore, this pattern of increased investment in firstborns appeared to be compensatory, as probability of survival did not differ by birth order. Our study did not find evidence for a firstborn advantage as observed in modern humans but does suggest that unlike many other primates, differences in maternal behavior help afford chimpanzee first-borns an equal chance of survival. PMID:25328164

  18. Assessing future changes in pan-European environmental flows

    NASA Astrophysics Data System (ADS)

    Laize, C.; Hannah, D. M.

    2011-12-01

    The potential river flow-driven impact of change on aquatic and riparian ecosystems at the pan-European scale under various climatological and development scenarios was assessed using a methodology based conceptually on the Range of Variability Approach (RVA) using the Indicators of Hydrological Alteration (IHA): a desk-top technique for assessing if environmental flow requirements. This paper presents an adaptation of the IHA approach using monthly flows. European and Mediterranean river networks were modelled as ~35,000 cells (0.5° longitude x 0.5° latitude). For each cell, modelled monthly flows were generated for an ensemble of 10 future climate change scenarios. These scenarios consist of combinations of two climate scenarios (IPCM4 and MIMR) and four socio-economic water-use scenarios (each with a main driver of economy, policy, security, or sustainability), projected for 2050s. IHA-styled statistics were calculated. By tailoring the RVA, acceptable baseline environmental flow ranges and departures from these of the projected hydrological regimes were assessed and coded using a traffic-light system (green for environmental flows met, amber minor variation, red major variation). For the first time, the results show spatial patterns of flow change and associated potential river ecosystem impacts across the wider European continent. Importantly, the findings indicate that climate change may be a more influential driver than water-use change in determining future river ecosystem health . Patterns were also investigated against broad basin types to identify which are most or least at risk.

  19. Star Formation Histories from Pan-Chromatic Infrared Continuum Surveys

    NASA Astrophysics Data System (ADS)

    Molinari, Sergio

    2010-11-01

    One of the currently most disputed issues in Star Formation is the timeline of the whole process. Is it a “slow” process of cloud assembly which, mediated by magnetic fields, evolve toward turbulence-supported clumps which are eventually super-critical to collapse, e.g. McKee & Tan (2003)? Or do clumps originate in already super-critical state in the post-shock regions of large-scale Galactic converging flows, e.g. Hartmann et al. (2001) with a rapid collapse in a crossing time or so (Elmegreen 2000)? A pan-chromatic 1μm-1mm continuum view of cluster forming regions in their early stages offers access to the most massive members longward of 5-10μm, as well as the low-mass members which instead dominate the emission in the near-IR, offering an interesting potential in stimulating advances in theoretical modelling of clustered star formation, its history and rate.

  20. Social play in bonobos (Pan paniscus) and chimpanzees (Pan troglodytes): Implications for natural social systems and interindividual relationships.

    PubMed

    Palagi, Elisabetta

    2006-03-01

    This study compares adult play behavior in the two Pan species in order to test the effects of phylogenetic closeness and the nature of social systems on play distribution. The social play (both with fertile and immature subjects) performed by adults did not differ between the two species. In contrast, in bonobos, play levels among fertile subjects were higher than in chimpanzees. Findings regarding levels of undecided conflicts (more frequent in bonobos) and formal submission displays (lacking in bonobos) confirm, in the two colonies under study, that bonobos exhibit "egalitarianism" more than chimpanzees. Some authors emphasized the importance of play-fighting for social assessment when relationships among individuals are not codified and structured according to rank-rules. Indeed, adult bonobos played more roughly than chimpanzees. Moreover, adult bonobos displayed the full play-face at a high frequency especially during rough play sessions, whereas in chimpanzees, the frequency of play signals was not affected by roughness of play. The frequency of social play among bonobo females was higher than in any other sex combinations, whereas no difference was found for chimpanzees. As a matter of fact, social play can be viewed as a balance between cooperation and competition. Among bonobo females, characterized by social competence and affiliation, social play might enhance their behavioral flexibility and increase their socially symmetrical relationships which, after all, are the basis for their egalitarian society.

  1. Rationale and design of the Pan-African Sudden Cardiac Death survey: the Pan-African SCD study

    PubMed Central

    Bonny, Aimé; Bonny, Aimé; Ngantcha, Marcus; Ndongo Amougou, Sylvie; Kane, Adama; Marrakchi, Sonia; Okello, Emmy; Taty, Georges; Gehani, Abdulrrazzak; Diakite, Mamadou; Talle, Mohammed A; Lambiase, Pier D; Houenassi, Martin; Chin, Ashley; Otieno, Harun; Temu, Gloria; Koffi Owusu, Isaac; Karaye, Kamilu M; Awad, Abdalla AM; Gregers Winkel, Bo; Priori, Silvia G; Priori, Silvia G

    2014-01-01

    Summary Background The estimated rate of sudden cardiac death (SCD) in Western countries ranges from 300 000 to 400 000 annually, which represents 0.36 to 1.28 per 1 000 inhabitants in Europe and the United States. The burden of SCD in Africa is unknown. Our aim is to assess the epidemiology of SCD in Africa. Methods The Pan-Africa SCD study is a prospective, multicentre, community-based registry monitoring all cases of cardiac arrest occurring in victims over 15 years old. We will use the definition of SCD as ‘witnessed natural death occurring within one hour of the onset of symptoms’ or ‘unwitnessed natural death within 24 hours of the onset of symptoms’. After appro val from institutional boards, we will record demographic, clinical, electrocardiographic and biological variables of SCD victims (including survivors of cardiac arrest) in several African cities. All deaths occurring in residents of districts of interest will be checked for past medical history, circumstances of death, and autopsy report (if possible). We will also analyse the employment of resuscitation attempts during the time frame of sudden cardiac arrest (SCA) in various patient populations throughout African countries. Conclusion This study will provide comprehensive, contemporary data on the epidemiology of SCD in Africa and will help in the development of strategies to prevent and manage cardiac arrest in this region of the world. PMID:25192301

  2. Assessment of the Sources, Distribution and Interanual Variability of PAN over North America using New Observations from TES.

    NASA Astrophysics Data System (ADS)

    Zhu, L.; Fischer, E. V.; Payne, V.; Worden, J.; Jiang, Z.; Kulawik, S. S.

    2015-12-01

    Peroxyacetyl nitrate (PAN) is an important trace gas that serves to transport nitrogen oxide radicals (NOx = NO + NO2) throughout the troposphere. PAN is observed to form rapidly in fire plumes from the oxidation of short-lived volatile organic compounds (VOCs) in the presence of NOx. It is thought that efficient PAN production in smoke plumes may lead to relatively efficient downwind ozone (O3) production if PAN decomposition serves as an important source of NOx. North America has a relatively long biomass burning season; fires are observed in many different locations over North America during late spring and summer. Here, we present the first measurements of elevated PAN from Tropospheric Emission Spectrometer (TES) over western North America during biomass burning season (late spring through summer). We investigate the relationships between the observed interannual variability of elevated PAN and fires, temperature, meteorology and long-range transport.

  3. Observations of PAN and its confinement in the Asian Monsoon Anticyclone in high spatial resolution

    NASA Astrophysics Data System (ADS)

    Ungermann, Joern; Ploeger, Felix; Spang, Reinhold; Riese, Martin

    2016-04-01

    This talk presents a set of observations by the CRyogenic Infrared Spectrometers and Telescopes for the Atmosphere (CRISTA) infrared limb sounder on the SPAS platform in low-earth orbit. The spatially highly resolved trace gas measurements of six days in August 1997 allow a close look on the confinement of air masses within the Asian Summer Monsoon (ASM) anticyclone. Peroxyacetyl nitrate (PAN) is a secondary pollutant without sources in the stratosphere and acts as a tropospheric tracer. In combination with ozone as a stratospheric tracer, an eddy-shedding event of the ASM could be observed. The measured PAN volume mixing ratios (VMR) correlate well with potential vorticity (PV) derived from ECMWF ERA-Interim model data. Computing the gradient of PAN over PV on isentropes reveals that PAN VMR exhibit the strongest decrease at each isentrope for an increasing value of PV, which may be used to identify the extent of the ASM on that isentrope. CRISTA measurements also provide the temperature of measured air parcels and thus allow to derive the location of the thermal tropopause. We find that the thermal tropopause coincides with the border of the positive PAN anomaly both horizontally and vertically within the ASM anticyclone. In contrast, the shed eddy exhibits enhanced PAN VMRs for 1 to 2 km above the thermal tropopause. The amount of mixing may also be characterised by projecting the derived air parcels into tracer-tracer space using PAN and ozone as tropospheric and stratospheric tracer, respectively. This reveals that the anticyclone contains few mixed parcels in contrast to the region between the anticyclone and the shed eddy. This implies that while the anticyclone confines polluted air masses well, eddy shedding provides a very rapid horizontal transport pathway of Asian pollution into the extratropical lowermost stratosphere with a time scale of only a few days.

  4. Observations of PAN and its confinement in the Asian summer monsoon anticyclone in high spatial resolution

    NASA Astrophysics Data System (ADS)

    Ungermann, Jörn; Ern, Mandfred; Kaufmann, Martin; Müller, Rolf; Spang, Reinhold; Ploeger, Felix; Vogel, Bärbel; Riese, Martin

    2016-07-01

    This paper presents an analysis of trace gases in the Asian summer monsoon (ASM) region on the basis of observations by the CRISTA infrared limb sounder taken in low-earth orbit in August 1997. The spatially highly resolved measurements of peroxyacetyl nitrate (PAN) and O3 allow a detailed analysis of an eddy-shedding event of the ASM anticyclone. We identify enhanced PAN volume mixing ratios (VMRs) within the main anticyclone and within the eddy, which are suitable as a tracer for polluted air originating in India and China. Plotting the retrieved PAN VMRs against potential vorticity (PV) and potential temperature reveals that the PV value at which the PAN VMRs exhibit the strongest decrease with respect to PV increases with potential temperature. These PV values might be used to identify the extent of the ASM. Using temperature values also derived from CRISTA measurements, we also computed the location of the thermal tropopause according to the WMO criterion and find that it confines the PAN anomaly vertically within the main ASM anticyclone. In contrast, the shed eddy exhibits enhanced PAN VMRs for 1 to 2 km above the thermal tropopause. Using the relationship between PAN as a tropospheric tracer and O3 as a stratospheric tracer to identify mixed air parcels, we further found the anticyclone to contain few such air parcels, whereas the region between the anticyclone and the eddy as well as the eddy itself contains many mixed air parcels. In combination, this implies that while the anticyclone confines polluted air masses well, eddy shedding provides a very rapid horizontal transport pathway of Asian pollution into the extratropical lowermost stratosphere with a timescale of only a few days.

  5. Barnacle Bill and Surrounding from Super-Pan

    NASA Technical Reports Server (NTRS)

    1997-01-01

    This is an image from the super-pan sequence. Of importance are some of the features around the rock nicknamed Barnacle Bill in the left foreground. The rock shows a 'streamlined tail' composed of particles deposited by wind on the leeward (downwind) side of the rock. Also seen is a 'moat' around the opposite (windward) side of the rock where either erosion (or non-deposition) of fine sediment has occurred. Mars Pathfinder scientist believe that the wind blowing over and around rocks like Barnacle Bill creates an airflow pattern wherein a buffer zone is formed immediately upwind of the rock and airflow patterns keep sediment from being deposited directly upwind of Barnacle Bill. On the downwind side, however, the airflow is complex and a small wake and tapered 'dead air zone' form. Sediment can be deposited within this region, the shape of the formed deposit corresponds to the airflow patterns that exist behind the rock. Similar features have been observed at the Viking landing sites, and are thought to form under high wind conditions during the autumn and winter seasons in the northern hemisphere. This image mosaic was processed by the U.S. Geological Survey in support of the NASA/JPL Mars Pathfinder Mars Mission.

    Mars Pathfinder is the second in NASA's Discovery program of low-cost spacecraft with highly focused science goals. The Jet Propulsion Laboratory, Pasadena, CA, developed and manages the Mars Pathfinder mission for NASA's Office of Space Science, Washington, D.C. JPL is a division of the California Institute of Technology (Caltech). The Imager for Mars Pathfinder (IMP) was developed by the University of Arizona Lunar and Planetary Laboratory under contract to JPL. Peter Smith is the Principal Investigator.

  6. Hand preferences for bimanual coordination in 29 bonobos (Pan paniscus).

    PubMed

    Chapelain, Amandine S; Hogervorst, Eef

    2009-01-03

    Brain lateralization has long been thought to be unique to humans. To investigate the origins and functions of this feature, researchers study behavioural laterality in other animals. Despite a substantial database, manual laterality in non-human primates remains a controversial topic. We give here a review of the main findings on manual preference in great apes. This article presents data on hand preferences for a bimanual coordination in 29 bonobos (Pan paniscus). The study aims to provide data on manual laterality for a complex bimanual task in this very interesting and rarely studied species. Hand preferences were assessed using the 'tube task'. This task has been used with other species, which allows reliable data comparisons. The task requires a bimanual coordinated precise action: the subject holds the tube with one hand while reaching for food inside with the other hand. As a complex task, this measure has been shown to be efficient in revealing hand preferences. It has revealed group-level right bias in chimpanzees. Bonobos had never been tested. We recorded both independent bouts (counting only the first pattern of a sequence of identical actions) and frequency (counting every action). The bonobos exhibited strong hand preferences. With frequency, 11 bonobos were classified as right-handed, 15 were left-handed and 3 had no preference. With bouts, 8 bonobos were right-handed, 9 were left-handed and 12 had no preference. No group-level bias appeared. The results are discussed in relation with previous findings and theories on brain lateralization.

  7. Welcome Back: Responses of Female Bonobos (Pan paniscus) to Fusions.

    PubMed

    Moscovice, Liza R; Deschner, Tobias; Hohmann, Gottfried

    2015-01-01

    In species with a high degree of fission-fusion social dynamics, fusions may trigger social conflict and thus provide an opportunity to identify sources of social tension and mechanisms related to its alleviation. We characterized behavioral and endocrine responses of captive female bonobos (Pan paniscus) to fusions within a zoo facility designed to simulate naturalistic fission-fusion social dynamics. We compared urinary cortisol levels and frequencies of aggression, grooming and socio-sexual interactions between female bonobos while in stable sub-groups and when one "joiner" was reunited with the "residents" of another sub-group. We hypothesized that fusions would trigger increases in aggression and cortisol levels among reunited joiners and resident females. We further predicted that females who face more uncertainty in their social interactions following fusions may use grooming and/or socio-sexual behavior to reduce social tension and aggression. The only aggression on reunion days occurred between reunited females, but frequencies of aggression remained low across non-reunion and reunion days, and there was no effect of fusions on cortisol levels. Fusions did not influence patterns of grooming, but there were increases in socio-sexual solicitations and socio-sexual interactions between joiners and resident females. Joiners who had been separated from residents for longer received the most solicitations, but were also more selective in their acceptance of solicitations and preferred to have socio-sexual interactions with higher-ranking residents. Our results suggest that socio-sexual interactions play a role in reintegrating female bonobos into social groups following fusions. In addition, females who receive a high number of solicitations are able to gain more control over their socio-sexual interactions and may use socio-sexual interactions for other purposes, such as to enhance their social standing.

  8. Sex differences in tool use acquisition in bonobos (Pan paniscus).

    PubMed

    Boose, Klaree J; White, Frances J; Meinelt, Audra

    2013-09-01

    All the great ape species are known tool users in both the wild and captivity, although there is great variation in ability and behavioral repertoire. Differences in tool use acquisition between chimpanzees and gorillas have been attributed to differing levels of social tolerance as a result of differences in social structure. Chimpanzees also show sex differences in acquisition and both chimpanzees and bonobos demonstrate a female bias in tool use behaviors. Studies of acquisition are limited in the wild and between species comparisons are complicated in captivity by contexts that often do not reflect natural conditions. Here we investigated tool use acquisition in a captive group of naïve bonobos by simulating naturalistic conditions. We constructed an artificial termite mound fashioned after those that occur in the wild and tested individuals within a social group context. We found sex differences in latencies to attempt and to succeed where females attempted to fish, were successful more quickly, and fished more frequently than males. We compared our results to those reported for chimpanzees and gorillas. Males across all three species did not differ in latency to attempt or to succeed. In contrast, bonobo and chimpanzee females succeeded more quickly than did female gorillas. Female bonobos and female chimpanzees did not differ in either latency to attempt or to succeed. We tested the social tolerance hypothesis by investigating the relationship between tool behaviors and number of neighbors present. We also compared these results to those reported for chimpanzees and gorillas and found that bonobos had the fewest numbers of neighbors present. The results of this study do not support the association between number of neighbors and tool behavior reported for chimpanzees. However, bonobos demonstrated a similar sex difference in tool use acquisition, supporting the hypothesis of a female bias in tool use in Pan.

  9. Measuring quasar variability with Pan-STARRS1 and SDSS

    SciTech Connect

    Morganson, E.; Rix, H.-W.; Schlafly, E. F.; Walter, F.; Burgett, W. S.; Chambers, K. C.; Kaiser, N.; Magnier, E. A.; Morgan, J. S.; Tonry, J. L.; Green, P. J.; Marshall, P. J.; Price, P. A.

    2014-04-01

    We measure quasar variability using the Panoramic Survey Telescope and Rapid Response System 1 Survey (Pan-STARRS1 or PS1) and the Sloan Digital Sky Survey (SDSS) and establish a method of selecting quasars via their variability in 10{sup 4} deg{sup 2} surveys. We use 10{sup 5} spectroscopically confirmed quasars that have been well measured in both PS1 and SDSS and take advantage of the decadal timescales that separate SDSS measurements and PS1 measurements. A power law model fits the data well over the entire time range tested, 0.01-10 yr. Variability in the current PS1-SDSS data set can efficiently distinguish between quasars and nonvarying objects. It improves the purity of a griz quasar color cut from 4.1% to 48% while maintaining 67% completeness. Variability will be very effective at finding quasars in data sets with no u band and in redshift ranges where exclusively photometric selection is not efficient. We show that quasars' rest-frame ensemble variability, measured as a root mean squared in Δ magnitudes, is consistent with V(z, L, t) = A {sub 0}(1 + z){sup 0.37}(L/L {sub 0}){sup –0.16}(t/1 yr){sup 0.246}, where L {sub 0} = 10{sup 46} erg s{sup –1} and A {sub 0} = 0.190, 0.162, 0.147, or 0.141 in the g {sub P1}, r {sub P1}, i {sub P1}, or z {sub P1}filter, respectively. We also fit across all four filters and obtain median variability as a function of z, L, and λ as V(z, L, λ, t) = 0.079(1 + z){sup 0.15}(L/L {sub 0}){sup –0.2}(λ/1000 nm){sup –0.44}(t/1 yr){sup 0.246}.

  10. Slow-blue nuclear hypervariables in PanSTARRS-1

    NASA Astrophysics Data System (ADS)

    Lawrence, A.; Bruce, A. G.; MacLeod, C.; Gezari, S.; Elvis, M.; Ward, M.; Smartt, S. J.; Smith, K. W.; Wright, D.; Fraser, M.; Marshall, P.; Kaiser, N.; Burgett, W.; Magnier, E.; Tonry, J.; Chambers, K.; Wainscoat, R.; Waters, C.; Price, P.; Metcalfe, N.; Valenti, S.; Kotak, R.; Mead, A.; Inserra, C.; Chen, T. W.; Soderberg, A.

    2016-11-01

    We discuss 76 large amplitude transients (Δm > 1.5) occurring in the nuclei of galaxies, nearly all with no previously known active galactic nucleus (AGN). They have been discovered as part of the Pan-STARRS1 (PS1) 3π survey, by comparison with Sloan Digital Sky Survey (SDSS) photometry a decade earlier, and then monitored with the Liverpool Telescope, and studied spectroscopically with the William Herschel Telescope (WHT). Based on colours, light-curve shape, and spectra, these transients fall into four groups. A few are misclassified stars or objects of unknown type. Some are red/fast transients and are known or likely nuclear supernovae. A few are either radio sources or erratic variables and so likely blazars. However the majority (˜66 per cent) are blue and evolve slowly, on a time-scale of years. Spectroscopy shows them to be AGN at z ˜ 0.3 - 1.4, which must have brightened since the SDSS photometry by around an order of magnitude. It is likely that these objects were in fact AGN a decade ago, but too weak to be recognized by SDSS; they could then be classed as `hypervariable' AGN. By searching the SDSS Stripe 82 quasar database, we find 15 similar objects. We discuss several possible explanations for these slow-blue hypervariables - (i) unusually luminous tidal disruption events; (ii) extinction events; (iii) changes in accretion state; and (iv) large amplitude microlensing by stars in foreground galaxies. A mixture of explanations (iii) and (iv) seems most likely. Both hold promise of considerable new insight into the AGN phenomenon.

  11. Pan-cancer analyses of the nuclear receptor superfamily

    PubMed Central

    Long, Mark D.; Campbell, Moray J.

    2016-01-01

    Nuclear receptors (NR) act as an integrated conduit for environmental and hormonal signals to govern genomic responses, which relate to cell fate decisions. We review how their integrated actions with each other, shared co-factors and other transcription factors are disrupted in cancer. Steroid hormone nuclear receptors are oncogenic drivers in breast and prostate cancer and blockade of signaling is a major therapeutic goal. By contrast to blockade of receptors, in other cancers enhanced receptor function is attractive, as illustrated initially with targeting of retinoic acid receptors in leukemia. In the post-genomic era large consortia, such as The Cancer Genome Atlas, have developed a remarkable volume of genomic data with which to examine multiple aspects of nuclear receptor status in a pan-cancer manner. Therefore to extend the review of NR function we have also undertaken bioinformatics analyses of NR expression in over 3000 tumors, spread across six different tumor types (bladder, breast, colon, head and neck, liver and prostate). Specifically, to ask how the NR expression was distorted (altered expression, mutation and CNV) we have applied bootstrapping approaches to simulate data for comparison, and also compared these NR findings to 12 other transcription factor families. Nuclear receptors were uniquely and uniformly downregulated across all six tumor types, more than predicted by chance. These approaches also revealed that each tumor type had a specific NR expression profile but these were most similar between breast and prostate cancer. Some NRs were down-regulated in at least five tumor types (e.g. NR3C2/MR and NR5A2/LRH-1)) whereas others were uniquely down-regulated in one tumor (e.g. NR1B3/RARG). The downregulation was not driven by copy number variation or mutation and epigenetic mechanisms maybe responsible for the altered nuclear receptor expression. PMID:27200367

  12. Slow-blue nuclear hypervariables in PanSTARRS-1

    DOE PAGES

    Lawrence, A.; Bruce, A. G.; MacLeod, C.; ...

    2016-09-08

    We discuss 76 large amplitude transients (Δm > 1.5) occurring in the nuclei of galaxies, nearly all with no previously known active galactic nucleus (AGN). They have been discovered as part of the Pan-STARRS1 (PS1) 3π survey, by comparison with Sloan Digital Sky Survey (SDSS) photometry a decade earlier, and then monitored with the Liverpool Telescope, and studied spectroscopically with the William Herschel Telescope (WHT). Based on colours, light-curve shape, and spectra, these transients fall into four groups. A few are misclassified stars or objects of unknown type. Some are red/fast transients and are known or likely nuclear supernovae. Amore » few are either radio sources or erratic variables and so likely blazars. However the majority (~66 per cent) are blue and evolve slowly, on a time-scale of years. Spectroscopy shows them to be AGN at z ~0.3 – 1.4, which must have brightened since the SDSS photometry by around an order of magnitude. It is likely that these objects were in fact AGN a decade ago, but too weak to be recognized by SDSS; they could then be classed as ‘hypervariable’ AGN. By searching the SDSS Stripe 82 quasar database, we find 15 similar objects. We discuss several possible explanations for these slow-blue hypervariables – (i) unusually luminous tidal disruption events; (ii) extinction events; (iii) changes in accretion state; and (iv) large amplitude microlensing by stars in foreground galaxies. A mixture of explanations (iii) and (iv) seems most likely. As a result, both hold promise of considerable new insight into the AGN phenomenon.« less

  13. A Pan-European and Cross-Discipline Metadata Portal

    NASA Astrophysics Data System (ADS)

    Widmann, Heinrich; Thiemann, Hannes; Lautenschlager, Michael

    2014-05-01

    In recent years, significant investments have been made to create a pan-European e-infrastructure supporting multiple and diverse research communities. This led to the establishment of the community-driven European Data Infrastructure (EUDAT) project that implements services to tackle the specific challenges of international and interdisciplinary research data management. The EUDAT metadata service B2FIND plays a central role in this context as a repository and a search portal for the diverse metadata collected from heterogeneous sources. For this we built up a comprehensive joint metadata catalogue and an open data portal and offer support for new communities interested in publishing their data within EUDAT. The implemented metadata ingestion workflow consists in three steps. First the metadata records - provided either by various research communities or via other EUDAT services - are harvested. Afterwards the raw metadata records are converted and mapped to unified key-value dictionaries. The semantic mapping of the non-uniform community specific metadata to homogenous structured datasets is hereby the most subtle and challenging task. Finally the mapped records are uploaded as datasets to the catalogue and displayed in the portal. The homogenisation of the different community specific data models and vocabularies enables not only the unique presentation of these datasets as tables of field-value pairs but also the faceted, spatial and temporal search in the B2FIND metadata portal. Furthermore the service provides transparent access to the scientific data objects through the given references in the metadata. We present here the functionality and the features of the B2FIND service and give an outlook of further developments.

  14. Slow-blue nuclear hypervariables in PanSTARRS-1

    SciTech Connect

    Lawrence, A.; Bruce, A. G.; MacLeod, C.; Gezari, S.; Elvis, M.; Ward, M.; Smartt, S. J.; Smith, K. W.; Wright, D.; Fraser, M.; Marshall, P.; Kaiser, N.; Burgett, W.; Magnier, E.; Tonry, J.; Chambers, K.; Wainscoat, R.; Waters, C.; Price, P.; Metcalfe, N.; Valenti, S.; Kotak, R.; Mead, A.; Inserra, C.; Chen, T. W.; Soderberg, A.

    2016-09-08

    We discuss 76 large amplitude transients (Δm > 1.5) occurring in the nuclei of galaxies, nearly all with no previously known active galactic nucleus (AGN). They have been discovered as part of the Pan-STARRS1 (PS1) 3π survey, by comparison with Sloan Digital Sky Survey (SDSS) photometry a decade earlier, and then monitored with the Liverpool Telescope, and studied spectroscopically with the William Herschel Telescope (WHT). Based on colours, light-curve shape, and spectra, these transients fall into four groups. A few are misclassified stars or objects of unknown type. Some are red/fast transients and are known or likely nuclear supernovae. A few are either radio sources or erratic variables and so likely blazars. However the majority (~66 per cent) are blue and evolve slowly, on a time-scale of years. Spectroscopy shows them to be AGN at z ~0.3 – 1.4, which must have brightened since the SDSS photometry by around an order of magnitude. It is likely that these objects were in fact AGN a decade ago, but too weak to be recognized by SDSS; they could then be classed as ‘hypervariable’ AGN. By searching the SDSS Stripe 82 quasar database, we find 15 similar objects. We discuss several possible explanations for these slow-blue hypervariables – (i) unusually luminous tidal disruption events; (ii) extinction events; (iii) changes in accretion state; and (iv) large amplitude microlensing by stars in foreground galaxies. A mixture of explanations (iii) and (iv) seems most likely. As a result, both hold promise of considerable new insight into the AGN phenomenon.

  15. Origin of HIV-1 in the chimpanzee Pan troglodytes troglodytes.

    PubMed

    Gao, F; Bailes, E; Robertson, D L; Chen, Y; Rodenburg, C M; Michael, S F; Cummins, L B; Arthur, L O; Peeters, M; Shaw, G M; Sharp, P M; Hahn, B H

    1999-02-04

    The human AIDS viruses human immunodeficiency virus type 1 (HIV-1) and type 2 (HIV-2) represent cross-species (zoonotic) infections. Although the primate reservoir of HIV-2 has been clearly identified as the sooty mangabey (Cercocebus atys), the origin of HIV-1 remains uncertain. Viruses related to HIV-1 have been isolated from the common chimpanzee (Pan troglodytes), but only three such SIVcpz infections have been documented, one of which involved a virus so divergent that it might represent a different primate lentiviral lineage. In a search for the HIV-1 reservoir, we have now sequenced the genome of a new SIVcpzstrain (SIVcpzUS) and have determined, by mitochondrial DNA analysis, the subspecies identity of all known SIVcpz-infected chimpanzees. We find that two chimpanzee subspecies in Africa, the central P. t. troglodytes and the eastern P. t. schweinfurthii, harbour SIVcpz and that their respective viruses form two highly divergent (but subspecies-specific) phylogenetic lineages. All HIV-1 strains known to infect man, including HIV-1 groups M, N and O, are closely related to just one of these SIVcpz lineages, that found in P. t. troglodytes. Moreover, we find that HIV-1 group N is a mosaic of SIVcpzUS- and HIV-1-related sequences, indicating an ancestral recombination event in a chimpanzee host. These results, together with the observation that the natural range of P. t. troglodytes coincides uniquely with areas of HIV-1 group M, N and O endemicity, indicate that P. t. troglodytes is the primary reservoir for HIV-1 and has been the source of at least three independent introductions of SIVcpz into the human population.

  16. Visual homing with a pan-tilt based stereo camera

    NASA Astrophysics Data System (ADS)

    Nirmal, Paramesh; Lyons, Damian M.

    2013-01-01

    Visual homing is a navigation method based on comparing a stored image of the goal location and the current image (current view) to determine how to navigate to the goal location. It is theorized that insects, such as ants and bees, employ visual homing methods to return to their nest. Visual homing has been applied to autonomous robot platforms using two main approaches: holistic and feature-based. Both methods aim at determining distance and direction to the goal location. Navigational algorithms using Scale Invariant Feature Transforms (SIFT) have gained great popularity in the recent years due to the robustness of the feature operator. Churchill and Vardy have developed a visual homing method using scale change information (Homing in Scale Space, HiSS) from SIFT. HiSS uses SIFT feature scale change information to determine distance between the robot and the goal location. Since the scale component is discrete with a small range of values, the result is a rough measurement with limited accuracy. We have developed a method that uses stereo data, resulting in better homing performance. Our approach utilizes a pan-tilt based stereo camera, which is used to build composite wide-field images. We use the wide-field images combined with stereo-data obtained from the stereo camera to extend the keypoint vector described in to include a new parameter, depth (z). Using this info, our algorithm determines the distance and orientation from the robot to the goal location. We compare our method with HiSS in a set of indoor trials using a Pioneer 3-AT robot equipped with a BumbleBee2 stereo camera. We evaluate the performance of both methods using a set of performance measures described in this paper.

  17. Mortality patterns following downsizing at Pan American World Airways.

    PubMed

    Steenland, Kyle; Pinkerton, Lynne E

    2008-01-01

    There are only a small number of studies on the health effects of involuntary unemployment (e.g., downsizing), and results are contradictory. The authors studied the mortality through 2002 of 13,370 Pan American World Airways employees who were born before 1940 and whose records were available after the company's bankruptcy in 1991. The cohort was divided into those who left work voluntarily (55%), involuntarily (39%), and because of illness (6%). The mean year of first employment was 1963, the mean year of last employment was 1987, and the mean age at leaving the company was 55 years. Of those who left involuntarily, 56% left at the time of bankruptcy in December 1991 or later. Twenty-two percent of the cohort died during follow-up, which began at the time of leaving the company. Standardized mortality ratios relative to the US population for all causes for those who left voluntarily, involuntarily, and because of illness were 0.72 (95% confidence interval (CI): 0.69, 0.76), 0.69 (95% CI: 0.65, 0.74), and 2.40 (95% CI: 2.22, 2.60), respectively. Ischemic heart disease mortality showed a similar pattern. Internal analyses comparing involuntary to voluntary leavers after adjusting for age, race, sex, calendar time, and education yielded all-cause and ischemic heart disease rate ratios of 0.96 (95% CI: 0.87, 1.07) and 1.11 (95% CI: 0.93, 1.35), respectively. Subanalyses of those who left involuntarily at age >/=60 years, or those who left involuntarily at the time of bankruptcy, did not indicate any excess mortality (all-cause standardized mortality ratios = 0.69 and 0.64, respectively). These data do not indicate that mortality among those who left involuntarily was higher than for those who left voluntarily. Both groups showed a strong healthy worker effect.

  18. 2.1 Pan-WCRP Monsoon Modelling Workshop Summary

    SciTech Connect

    Sperber, K R

    2005-06-28

    Ken Sperber led a discussion of the outcome of the Pan-WCRP Monsoon Modelling Workshop that was held at the University of California at Irvine from 15-17 June 2005. At the workshop presentations from key CLIVAR and GEWEX panels were presented to highlight the outstanding problems in modelling the Earth's monsoons. Additionally, presentations from invited experts were given to highlight important aspects of monsoon phenomena and processes, such as low-level jets, air-sea interaction, predictability, observational networks/studies, and model test beds etc. Since all persons attending the CLIVAR AAMP meeting were present for all, or most, of the monsoon workshop, a detailed description of the workshop presentations was not given. Rather, the discussion was focused on the recommendations of the workshop breakout groups and their relevance to CLIVAR AAMP. CLIVAR AAMP endorsed the near-term workshop recommendation of investigating the diurnal cycle using a hierarchy of models a key way forward for promoting CLIVAR/GEWEX interactions. In GCM studies CLIVAR researchers have identified the diurnal cycle as a forced ''mode'' of variability that is poorly represented in terms of amplitude and phase, especially in the case of precipitation. Typical phase errors of 6-12 hours are noted over both land and ocean in GCMs. CLIVAR views adequate simulation of the diurnal cycle as key aspect of variability in its own right, but also because of its potential rectification on to subseasonal variability (e.g., the Madden-Julian oscillation). It is hypothesized that improvement of diurnal variability may lead to an improved representation of intraseasonal variability and improved skill of monsoon forecasts on medium-range to seasonal time scales.

  19. THE FIRST HIGH-REDSHIFT QUASAR FROM Pan-STARRS

    SciTech Connect

    Morganson, Eric; De Rosa, Gisella; Decarli, Roberto; Walter, Fabian; Rix, Hans-Walter; Chambers, Ken; Burgett, William; Flewelling, Heather; Hodapp, Klaus; Kaiser, Nick; Magnier, Eugene; Sweeney, Bill; Waters, Christopher; McGreer, Ian; Fan, Xiaohui; Greiner, Jochen; Price, Paul

    2012-06-15

    We present the discovery of the first high-redshift (z > 5.7) quasar from the Panoramic Survey Telescope and Rapid Response System 1 (Pan-STARRS1 or PS1). This quasar was initially detected as an i{sub P1} dropout in PS1, confirmed photometrically with the SAO Wide-field InfraRed Camera at Arizona's Multiple Mirror Telescope (MMT) and the Gamma-Ray Burst Optical/Near-Infrared Detector at the MPG 2.2 m telescope in La Silla. The quasar was verified spectroscopically with the MMT Spectrograph, Red Channel and the Cassegrain Twin Spectrograph at the Calar Alto 3.5 m telescope. Its near-infrared spectrum was taken at the Large Binocular Telescope Observatory (LBT) with the LBT Near-Infrared Spectroscopic Utility with Camera and Integral Field Unit for Extragalactic Research. It has a redshift of 5.73, an AB z{sub P1} magnitude of 19.4, a luminosity of 3.8 Multiplication-Sign 10{sup 47} erg s{sup -1}, and a black hole mass of 6.9 Multiplication-Sign 10{sup 9} M{sub Sun }. It is a broad absorption line quasar with a prominent Ly{beta} peak and a very blue continuum spectrum. This quasar is the first result from the PS1 high-redshift quasar search that is projected to discover more than 100 i{sub P1} dropout quasars and could potentially find more than 10 z{sub P1} dropout (z > 6.8) quasars.

  20. Welcome Back: Responses of Female Bonobos (Pan paniscus) to Fusions

    PubMed Central

    Moscovice, Liza R.; Deschner, Tobias; Hohmann, Gottfried

    2015-01-01

    In species with a high degree of fission-fusion social dynamics, fusions may trigger social conflict and thus provide an opportunity to identify sources of social tension and mechanisms related to its alleviation. We characterized behavioral and endocrine responses of captive female bonobos (Pan paniscus) to fusions within a zoo facility designed to simulate naturalistic fission-fusion social dynamics. We compared urinary cortisol levels and frequencies of aggression, grooming and socio-sexual interactions between female bonobos while in stable sub-groups and when one “joiner” was reunited with the “residents” of another sub-group. We hypothesized that fusions would trigger increases in aggression and cortisol levels among reunited joiners and resident females. We further predicted that females who face more uncertainty in their social interactions following fusions may use grooming and/or socio-sexual behavior to reduce social tension and aggression. The only aggression on reunion days occurred between reunited females, but frequencies of aggression remained low across non-reunion and reunion days, and there was no effect of fusions on cortisol levels. Fusions did not influence patterns of grooming, but there were increases in socio-sexual solicitations and socio-sexual interactions between joiners and resident females. Joiners who had been separated from residents for longer received the most solicitations, but were also more selective in their acceptance of solicitations and preferred to have socio-sexual interactions with higher-ranking residents. Our results suggest that socio-sexual interactions play a role in reintegrating female bonobos into social groups following fusions. In addition, females who receive a high number of solicitations are able to gain more control over their socio-sexual interactions and may use socio-sexual interactions for other purposes, such as to enhance their social standing. PMID:25996476

  1. 77 FR 40147 - Pan Am Southern, LLC.-Abandonment Exemption-in Worcester County, MA; Springfield Terminal Railway...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-07-06

    ...; Springfield Terminal Railway Company--Discontinuance of Service Exemption--in Worcester County, MA Pan Am Southern, LLC (PAS) and Springfield Terminal Railway Company (ST) (collectively, applicants) jointly...

  2. Improved mid-infrared cross-sections for peroxyacetyl nitrate (PAN) vapour

    NASA Astrophysics Data System (ADS)

    Allen, G.; Remedios, J. J.; Newnham, D. A.; Smith, K. M.; Monks, P. S.

    2005-01-01

    Absorption spectra of peroxyacetyl nitrate (PAN, CH3C(O)OONO2) vapour at room temperature (295K) have been measured in the mid-infrared range, 550-2200cm-1 (18.2-4.55µm), using a Fourier Transform infrared spectrometer at instrument resolutions of 0.25 and 0.03cm-1 (unapodised). Between five and eight measurements were obtained for each spectral band of PAN in the pressure range 0.24-2.20mb showing good agreement with Beer's law. Both cross-section data and integrated absorption intensities for the five principal bands in the PAN spectra in this spectral range have been derived with peak cross-sections of the 794, 1163, 1302, 1741 and 1842cm-1 bands measured to be 0.95(±0.02), 1.21(±0.03), 0.92(±0.02), 2.39(±0.06) and 0.74(±0.03) (x10-18cm2molecule-1) respectively. Band intensities and band centre absorptivities are also reported for four weaker PAN absorption bands in the mid infrared for the first time. These observations are the highest spectral resolution measurements of PAN bands reported in the infrared to date. For three of the five strongest bands, the absolute integrated absorption intensities are in excellent agreement with previous studies. A 4.8% lower integrated intensity was found for the 1741cm-1νas(NO2) PAN absorption band, possibly as a result of the removal in this work of spectra affected by acetone contamination, while a 10.6% higher intensity was determined for the 1163cm-1ν(C-O) absorption band. No resolution of fine structure in the PAN absorption bands was observed at the resolutions studied. The confirmation of absorption cross-sections and estimated errors in this work will allow more accurate investigations of PAN using infrared spectroscopy, particularly for remote sensing of PAN in the atmosphere.

  3. Disordered Eating and Food Restrictions in Children with PANDAS/PANS

    PubMed Central

    Hommer, Rebecca; Gerardi, Diana M.; Grant, Paul; Rothschild, Leah; D'Souza, Precilla; Williams, Kyle; Leckman, James; Swedo, Susan E.; Murphy, Tanya K.

    2015-01-01

    Abstract Objective: Sudden onset clinically significant eating restrictions are a defining feature of the clinical presentation of some of the cases of pediatric acute-onset neuropsychiatric syndrome (PANS). Restrictions in food intake are typically fueled by contamination fears; fears of choking, vomiting, or swallowing; and/or sensory issues, such as texture, taste, or olfactory concerns. However, body image distortions may also be present. We investigate the clinical presentation of PANS disordered eating and compare it with that of other eating disorders. Methods: We describe 29 patients who met diagnostic criteria for PANS. Most also exhibited evidence that the symptoms might be sequelae of infections with Group A streptococcal bacteria (the pediatric autoimmune neuropsychiatric disorder associated with streptococcal infections [PANDAS] subgroup of PANS). Results: The clinical presentations are remarkable for a male predominance (2:1 M:F), young age of the affected children (mean=9 years; range 5–12 years), acuity of symptom onset, and comorbid neuropsychiatric symptoms. Conclusions: The food refusal associated with PANS is compared with symptoms listed for the new Diagnostic and Statistical Manual of Mental Disorders, 5th ed. (DSM-V) diagnosis of avoidant/restrictive food intake disorder (ARFID). Treatment implications are discussed, as well as directions for further research. PMID:25329522

  4. A novel partially biobased PAN-lignin blend as a potential carbon fiber precursor.

    PubMed

    Seydibeyoğlu, M Özgür

    2012-01-01

    Blends of polyacrylonitrile (PAN) and lignin were prepared with three different lignin types by solution blending and solution casting. Among three types of lignin, one type was chosen and different blend concentrations were prepared and casted. The casted blend films were characterized chemically with fourier transform infrared spectroscopy (FTIR), and thermally with thermogravimetric analysis (TGA). The mechanical properties of the blends were measured using dynamic mechanical analysis (DMA). FTIR analysis shows an excellent interaction of PAN and lignin. The interaction of the lignins and PAN was confirmed by TGA analysis. The DMA results reveal that the lignin enhance the mechanical properties of PAN at room temperature and elevated temperatures. The blend structure and morphology were observed using scanning electron microscopy (SEM). SEM images show that excellent polymer blends were prepared. The results show that it is possible to develop a new precursor material with a blend of lignin and PAN. These studies show that the side product of paper and cellulosic bioethanol industries, namely, lignin can be used for new application areas.

  5. Sealing device for an oil pan adapter in an internal combustion engine

    SciTech Connect

    Harada, Y.

    1987-06-02

    This patent describes an internal combustion engine having a cylinder, an oil pan under the cylinder block, and a fly-wheel housing mounted to one end of the cylinder block. The improvement comprises: an oil pan adapter mounted between the cylinder block and the oil pan and having an end face held against the fly-wheel housing; there being a generally U shaped groove in the end face of the oil pan adapter, the U shaped groove including a pair of vertical limbs each having a horizontal limb joined to its top end. Each horizontal limb is open both toward the cylinder block and the fly-wheel housing; and a generally U shaped sealing strip including a pair of vertical limbs each having a horizontal limb joined to its top end. The sealing strip is engaged in the U shaped groove in the end face of the oil pan adapter and fluid is tightly held against the fly-wheel housing and the cylinder block.

  6. PanDA: Exascale Federation of Resources for the ATLAS Experiment at the LHC

    NASA Astrophysics Data System (ADS)

    Barreiro Megino, Fernando; Caballero Bejar, Jose; De, Kaushik; Hover, John; Klimentov, Alexei; Maeno, Tadashi; Nilsson, Paul; Oleynik, Danila; Padolski, Siarhei; Panitkin, Sergey; Petrosyan, Artem; Wenaus, Torre

    2016-02-01

    After a scheduled maintenance and upgrade period, the world's largest and most powerful machine - the Large Hadron Collider(LHC) - is about to enter its second run at unprecedented energies. In order to exploit the scientific potential of the machine, the experiments at the LHC face computational challenges with enormous data volumes that need to be analysed by thousand of physics users and compared to simulated data. Given diverse funding constraints, the computational resources for the LHC have been deployed in a worldwide mesh of data centres, connected to each other through Grid technologies. The PanDA (Production and Distributed Analysis) system was developed in 2005 for the ATLAS experiment on top of this heterogeneous infrastructure to seamlessly integrate the computational resources and give the users the feeling of a unique system. Since its origins, PanDA has evolved together with upcoming computing paradigms in and outside HEP, such as changes in the networking model, Cloud Computing and HPC. It is currently running steadily up to 200 thousand simultaneous cores (limited by the available resources for ATLAS), up to two million aggregated jobs per day and processes over an exabyte of data per year. The success of PanDA in ATLAS is triggering the widespread adoption and testing by other experiments. In this contribution we will give an overview of the PanDA components and focus on the new features and upcoming challenges that are relevant to the next decade of distributed computing workload management using PanDA.

  7. Measurements of peroxyacetyl nitrate (PAN) and peroxypropionyl nitrate (PPN) at selected urban, rural and remote sites

    NASA Technical Reports Server (NTRS)

    Singh, Hanwant B.; Salas, Louis J.

    1989-01-01

    PAN and PPN were measured in a series of eight field studies performed at urban, rural and remote locations in the contiguous U.S. during 1983-1985. Seven of the eight studies were performed in the winter/spring period, a period of sparsely available data. Nearly 2000 air samples were analyzed during these studies. Mean PAN and PPN levels in the range of 45-1600 ppt (max. 7.9 ppb) and 5-230 ppt (max. 0.9 ppb), respectively, were measured. Despite a great deal of observed variability, PAN and PPN showed virtually identical behavior at all sites and in all seasons, supporting the view that these nitrogenous compounds are produced and destroyed by very similar mechanisms. On the average PPN concentrations were about 8 percent (range 3-14 percent) of PAN values. It is inferred that PPN/PAN ratio is highest in urban areas and declines as polluted air masses are transported over long distances.

  8. On-board Processing to Advance the PanFTS Imaging System for GEO-CAPE

    NASA Astrophysics Data System (ADS)

    Sander, S. P.; Pingree, P.; Bekker, D. L.; Blavier, J. L.; Bryk, M.; Franklin, B.; Hayden, J.; Ryan, M.; Werne, T. A.

    2013-12-01

    The Panchromatic Fourier Transform Spectrometer (PanFTS) is an imaging instrument designed to record atmospheric spectra of the Earth from the vantage point of a geosynchronous orbit. Each observation covers a scene of 128x128 pixels. In order to retrieve multiple chemical families and perform passive vertical profiling, the recorded spectra will cover a wide wavelength range, from the thermal infrared to the near ultraviolet. The small size of the nadir ground-sampling distance and the desire to re-visit each scene hourly result in a PanFTS design that challenges the downlink capabilities of current radio communication. The PanFTS on-board processing will reduce downlink rates by converting time-domain interferograms to band-limited spectra, hence achieving a factor 20 in data reduction. In this paper, we report on the first year progress of this NASA AIST-11 task and on the adaptation of existing Virtex-5 FPGA designs to support the PanFTS Focal Plane Array control and data interfaces. We have produced a software demonstration of the current PanFTS data reduction algorithms. The real-time processing of the interferometer metrology laser signal is the first step required for the conversion of time-domain interferograms to path difference. This laser processing is now performed entirely as digital signal processing inside the Virtex-5 FPGA and also allows for tip/tilt correction of the interferometer mirrors, a task that was previously performed only with complicated and inflexible analog electronics.

  9. Method for pan-tilt camera calibration using single control point.

    PubMed

    Li, Yunting; Zhang, Jun; Hu, Wenwen; Tian, Jinwen

    2015-01-01

    The pan-tilt (PT) camera is widely used in video surveillance systems due to its rotatable property and low cost. The rough output of a PT camera may not satisfy the demand of practical applications; hence an accurate calibration method of a PT camera is desired. However, high-precision camera calibration methods usually require sufficient control points not guaranteed in some practical cases of a PT camera. In this paper, we present a novel method to online calibrate the rotation angles of a PT camera by using only one control point. This is achieved by assuming that the intrinsic parameters and position of the camera are known in advance. More specifically, we first build a nonlinear PT camera model with respect to two parameters Pan and Tilt. We then convert the nonlinear model into a linear model according to sine and cosine of Tilt, where each element in the augmented coefficient matrix is a function of the single variable Pan. A closed-form solution of Pan and Tilt can then be derived by solving a quadratic equation of tangent of Pan. Our method is noniterative and does not need features matching; thus its time efficiency is better. We evaluate our calibration method on various synthetic and real data. The quantitative results demonstrate that the proposed method outperforms other state-of-the-art methods if the intrinsic parameters and position of the camera are known in advance.

  10. Detection of known meteoroid streams using Pan-STARRS

    NASA Astrophysics Data System (ADS)

    Weryk, Robert J.; Wainscoat, Richard J.

    2015-11-01

    Meteors are produced from meteoroids that are Near Earth Objects (NEOs). Created from the disruption of comets and asteroids, their study allows for the physical and chemical properties of parent bodies to be better constrained. Because most meteoroids are too small to be directly observed in space, ground-based camera networks (such as Weryk et al., 2008) are often used to detect fireballs produced from centimetre sized objects, and their mass influx can be extrapolated to larger sizes.The mass/size distribution of meteoroid streams is an important topic, relating directly to the impact hazard to the Earth (see Brown et al., 2015). Unfortunately, the largest meteoroids interact with the Earth’s atmosphere so infrequently that their observation is very biased and not predictable, but due to their large size, they may be visible in space. Barabanov and Smirnov (2005) presented detections of large possibly cometary meteoroids over 5 m in diameter, but their results could not be confirmed by Beech et al. (2004). More recently, Micheli and Tholen (2015) looked for objects in the meteoroid streams of several major showers, but found no stream objects.The Pan-STARRS1 (PS1) telescope, operated by the University of Hawai`i, has a large seven square degree field-of-view which can reliably detect new NEOs. However, not every NEO candidate is followed up and linked into a well established orbit, possibly due to the fact that the smallest bodies will not be visible at the sensitivity limit of PS1 for very long, or that their predicted orbit is uncertain so follow up telescopes look in the wrong location. In this work, we present our results to date about searching for potential meteoroid streams (with an emphasis on cometary streams) with the PS1 telescope using its multi-year database of unlinked NEO detections. For recent observations, where possible, we have observed the true non-geocentric radiants directly during peak shower activity. The detection of known meteoroid

  11. Pan-phylum Comparison of Nematode Metabolic Potential.

    PubMed

    Tyagi, Rahul; Rosa, Bruce A; Lewis, Warren G; Mitreva, Makedonka

    2015-05-01

    C. elegans and the human hookworm Necator americanus. We illustrate how analyzing and comparing metabolism at the level of pathway modules can improve existing knowledge of nematode metabolic potential and can provide parasitism related insights. Our reconstruction and comparison of nematode metabolic pathways at a pan-phylum and inter-phylum level enabled determination of phylogenetic restrictions and differential expression of pathways. A visualization of our results is available at http://nematode.net and the program for identification of module completeness (modDFS) is freely available at SourceForge. The methods reported will help biologists to predict biochemical potential of any organism with available deduced proteome, to direct experiments and test hypotheses.

  12. Laterality of hand function in naturalistically housed chimpanzees (Pan troglodytes).

    PubMed

    Fletcher, Alison W; Weghorst, Jennifer A

    2005-05-01

    Studies of laterality of hand function in chimpanzees (Pan troglodytes) have the potential to tell us about the origins of handedness in Homo sapiens. However, the data are confusing, with discrepancies present between studies done in the field and the laboratory: the former show wild chimpanzees to be unlateralised at the population level, while the latter show captive chimpanzees as lateralised at the population level. This study of 26 semi-free ranging chimpanzees of Chester Zoo, UK, aimed to investigate a situation between the wild and captivity and provided ethological data for 43 categories of spontaneous manual use and 14 categories of tool use. Other variables recorded were subordinate hand activity, whether the subject was arboreal or terrestrial, and the identity of the subject. Using switching focal subject sampling, 23,978 bouts of hand use and 1,090 bouts of tool use were recorded. No population-level handedness was present for manual non-tool use activities in the naturalistically housed chimpanzees of Chester Zoo in a similar way to studies of wild chimpanzees. However, about half of the individuals were lateralised to one side or the other for the foraging behaviours of pick up, eat, and pluck. Using a modified version of McGrew and Marchant's (1997) Laterality Framework, these results are comparable to some wild and captive populations for similar foraging tasks. Bimanuality was rare and thus prevented comparison with captive experimental studies that have reported population right handedness. Behaviour involving contact with water elicited stronger lateralisation. Chester chimpanzees were more likely to exhibit hand preferences for manual tasks with increasing age but there were no effects of sex or rearing history on hand specialisations in adult individuals. Lateralisation was biased in tool use, which evoked significant left hand preferences in half the individuals, with no effect of age. Results are discussed comparatively with reference to

  13. Pan-phylum Comparison of Nematode Metabolic Potential

    PubMed Central

    Tyagi, Rahul; Rosa, Bruce A.; Lewis, Warren G.; Mitreva, Makedonka

    2015-01-01

    C. elegans and the human hookworm Necator americanus. We illustrate how analyzing and comparing metabolism at the level of pathway modules can improve existing knowledge of nematode metabolic potential and can provide parasitism related insights. Our reconstruction and comparison of nematode metabolic pathways at a pan-phylum and inter-phylum level enabled determination of phylogenetic restrictions and differential expression of pathways. A visualization of our results is available at http://nematode.net and the program for identification of module completeness (modDFS) is freely available at SourceForge. The methods reported will help biologists to predict biochemical potential of any organism with available deduced proteome, to direct experiments and test hypotheses. PMID:26000881

  14. Mineralogy and geochemistry of the sediments of the Etosha Pan Region in northern Namibia: a reconstruction of the depositional environment

    NASA Astrophysics Data System (ADS)

    Buch, M. W.; Rose, D.

    1996-04-01

    The paper presents the results of mineralogical and chemical analyses of the clay fraction (<2 μm) of samples from boreholes in the Etosha Pan and smaller pans of the Owambo-Pans-Plain in the Etosha National Park, northern Namibia. Four mineral associations can be differentiated within the vertical succession of the profiles in the Etosha Pan: I) analcime/K-feldspar and mica association; II) analcime/K-feldspar and sepiolite (loughlinite) association; III) expandable sheet silicate (saponite/stevensite) association; and IV) calcite and dolomite association. These mineral associations are the expression of the seasonal saline-alkaline to calciferous, saline-alkaline environment of the present Etosha Pan. The sedimentological and pedological descriptions, combined with the results of the mineralogical and chemical analyses, show a clear differentiation of the profiles of the Etosha Pan in: i) disintegrated sedimentary rocks of the Andoni Formation (mineral association I); ii) par-autochthonous sediments (mineral associations I and II); and iii) allochthonous sediments (mineral associations III and IV). Based on this vertical mineralogical differentiation, four sedimentological-mineralogical/ chemical zones are defined for the actual floor of the Etosha Pan. The zonation shows that a thin cover of allochthonous sediments is only present along the southern margin of the Etosha Pan, including Fisher's Pan. The results support the hypothesis that the Etosha Pan is an erosional form rather than a palaeolake. In principle, the zonal configuration of the recent allochthonous and parautochthonous sediments identified on the Etosha Pan provides a small-scale depositional environment model for the formation of the Etosha limestone and sediments of the Andoni Formation during the Oligocene and Miocene. Thus, the findings help to reconstruct the depositional environment of the evolution of the extensive depocentre of the Etosha basin during the Late Tertiary.

  15. Evolution of the ATLAS PanDA Production and Distributed Analysis System

    NASA Astrophysics Data System (ADS)

    Maeno, T.; De, K.; Wenaus, T.; Nilsson, P.; Walker, R.; Stradling, A.; Fine, V.; Potekhin, M.; Panitkin, S.; Compostella, G.

    2012-12-01

    The PanDA (Production and Distributed Analysis) system has been developed to meet ATLAS production and analysis requirements for a data-driven workload management system capable of operating at LHC data processing scale. PanDA has performed well with high reliability and robustness during the two years of LHC data-taking, while being actively evolved to meet the rapidly changing requirements for analysis use cases. We will present an overview of system evolution including automatic rebrokerage and reattempt for analysis jobs, adaptation for the CernVM File System, support for the multi-cloud model through which Tier-2 sites act as members of multiple clouds, pledged resource management and preferential brokerage, and monitoring improvements. We will also describe results from the analysis of two years of PanDA usage statistics, current issues, and plans for the future.

  16. Stone tool production and utilization by bonobo-chimpanzees (Pan paniscus).

    PubMed

    Roffman, Itai; Savage-Rumbaugh, Sue; Rubert-Pugh, Elizabeth; Ronen, Avraham; Nevo, Eviatar

    2012-09-04

    Using direct percussion, language-competent bonobo-chimpanzees Kanzi and Pan-Banisha produced a significantly wider variety of flint tool types than hitherto reported, and used them task-specifically to break wooden logs or to dig underground for food retrieval. For log breaking, small flakes were rotated drill-like or used as scrapers, whereas thick cortical flakes were used as axes or wedges, leaving consistent wear patterns along the glued slits, the weakest areas of the log. For digging underground, a variety of modified stone tools, as well as unmodified flint nodules, were used as shovels. Such tool production and utilization competencies reported here in Pan indicate that present-day Pan exhibits Homo-like technological competencies.

  17. Body composition in Pan paniscus compared with Homo sapiens has implications for changes during human evolution.

    PubMed

    Zihlman, Adrienne L; Bolter, Debra R

    2015-06-16

    The human body has been shaped by natural selection during the past 4-5 million years. Fossils preserve bones and teeth but lack muscle, skin, fat, and organs. To understand the evolution of the human form, information about both soft and hard tissues of our ancestors is needed. Our closest living relatives of the genus Pan provide the best comparative model to those ancestors. Here, we present data on the body composition of 13 bonobos (Pan paniscus) measured during anatomical dissections and compare the data with Homo sapiens. These comparative data suggest that both females and males (i) increased body fat, (ii) decreased relative muscle mass, (iii) redistributed muscle mass to lower limbs, and (iv) decreased relative mass of skin during human evolution. Comparison of soft tissues between Pan and Homo provides new insights into the function and evolution of body composition.

  18. Scale Up of Pan Coating Process Using Quality by Design Principles.

    PubMed

    Agrawal, Anjali M; Pandey, Preetanshu

    2015-11-01

    Scale up of pan coating process is of high importance to the pharmaceutical and food industry. The number of process variables and their interdependence in a pan coating process can make it a rather complex scale-up problem. This review discusses breaking down the coating process variables into three main categories: pan-related, spray-related, and thermodynamic-related factors. A review on how to scale up each of these factors is presented via two distinct strategies--"macroscopic" and "microscopic" scale-up. In a Quality by Design paradigm, where an increased process understanding is required, there is increased emphasis on "microscopic" scale-up, which by definition ensures a more reproducible process and thereby robust scale-up. This article also reviews the various existing and new modeling and process analytical technology tools that can provide additional information to facilitate a more fundamental understanding of the coating process.

  19. Trends in Dengue Cases Imported into the United States from Pan America 2001–2012

    PubMed Central

    van Dodewaard, Caitlin A.M.; Richards, Stephanie L.

    2015-01-01

    The objective of this study was to improve risk assessments of travel on dengue (DEN) virus (DENV) distribution. We investigated the exposure risk of US citizens traveling to DEN-endemic Pan American countries. The number of DEN cases reported in 51 Pan American countries from 2001 to 2012 was compared to the population of the same countries. The number of US travelers visiting the Pan American countries was categorized by region, and travel-related DEN infections were analyzed. US residents visiting the Dominican Republic exhibited the highest traveler-related DEN incidence. Brazil showed the most DEN cases in its residents (>1 million reported cases in 2010). The number of DEN cases continues to rise as does international travel and the geographic range of potential DENV vectors. DENV risk assessments may be improved by analyzing the possible routes of entry. Underreporting remains an issue for calculating DENV transmission risk by country and region. PMID:26766913

  20. gLExec Integration with the ATLAS PanDA Workload Management System

    NASA Astrophysics Data System (ADS)

    Karavakis, E.; Barreiro, F.; Campana, S.; De, K.; Di Girolamo, A.; Litmaath, M.; Maeno, T.; Medrano, R.; Nilsson, P.; Wenaus, T.

    2015-12-01

    ATLAS user jobs are executed on Worker Nodes (WNs) by pilots sent to sites by pilot factories. This paradigm serves to allow a high job reliability and although it has clear advantages, such as making the working environment homogeneous, the approach presents security and traceability challenges. To address these challenges, gLExec can be used to let the payloads for each user be executed under a different UNIX user id that uniquely identifies the ATLAS user. This paper describes the recent improvements and evolution of the security model within the ATLAS PanDA system, including improvements in the PanDA pilot, in the PanDA server and their integration with MyProxy, a credential caching system that entitles a person or a service to act in the name of the issuer of the credential. Finally, it presents results from ATLAS user jobs running with gLExec and describes the deployment campaign within ATLAS.

  1. Stone tool production and utilization by bonobo-chimpanzees (Pan paniscus)

    PubMed Central

    Roffman, Itai; Savage-Rumbaugh, Sue; Rubert-Pugh, Elizabeth; Ronen, Avraham; Nevo, Eviatar

    2012-01-01

    Using direct percussion, language-competent bonobo-chimpanzees Kanzi and Pan-Banisha produced a significantly wider variety of flint tool types than hitherto reported, and used them task-specifically to break wooden logs or to dig underground for food retrieval. For log breaking, small flakes were rotated drill-like or used as scrapers, whereas thick cortical flakes were used as axes or wedges, leaving consistent wear patterns along the glued slits, the weakest areas of the log. For digging underground, a variety of modified stone tools, as well as unmodified flint nodules, were used as shovels. Such tool production and utilization competencies reported here in Pan indicate that present-day Pan exhibits Homo-like technological competencies. PMID:22912400

  2. Body composition in Pan paniscus compared with Homo sapiens has implications for changes during human evolution

    PubMed Central

    Zihlman, Adrienne L.; Bolter, Debra R.

    2015-01-01

    The human body has been shaped by natural selection during the past 4–5 million years. Fossils preserve bones and teeth but lack muscle, skin, fat, and organs. To understand the evolution of the human form, information about both soft and hard tissues of our ancestors is needed. Our closest living relatives of the genus Pan provide the best comparative model to those ancestors. Here, we present data on the body composition of 13 bonobos (Pan paniscus) measured during anatomical dissections and compare the data with Homo sapiens. These comparative data suggest that both females and males (i) increased body fat, (ii) decreased relative muscle mass, (iii) redistributed muscle mass to lower limbs, and (iv) decreased relative mass of skin during human evolution. Comparison of soft tissues between Pan and Homo provides new insights into the function and evolution of body composition. PMID:26034269

  3. Application of thermal model for pan evaporation to the hydrology of a defined medium, the sponge

    NASA Technical Reports Server (NTRS)

    Trenchard, M. H.; Artley, J. A. (Principal Investigator)

    1981-01-01

    A technique is presented which estimates pan evaporation from the commonly observed values of daily maximum and minimum air temperatures. These two variables are transformed to saturation vapor pressure equivalents which are used in a simple linear regression model. The model provides reasonably accurate estimates of pan evaporation rates over a large geographic area. The derived evaporation algorithm is combined with precipitation to obtain a simple moisture variable. A hypothetical medium with a capacity of 8 inches of water is initialized at 4 inches. The medium behaves like a sponge: it absorbs all incident precipitation, with runoff or drainage occurring only after it is saturated. Water is lost from this simple system through evaporation just as from a Class A pan, but at a rate proportional to its degree of saturation. The contents of the sponge is a moisture index calculated from only the maximum and minium temperatures and precipitation.

  4. Oil content and fatty acid composition of eggs cooked in drying oven, microwave and pan.

    PubMed

    Juhaimi, Fahad Al; Uslu, Nurhan; Özcan, Mehmet Musa

    2017-01-01

    In this study, the effect of heating on the oil yield and fatty acid composition of eggs cooked in drying oven, microwave oven, pan and boiled were determined, and compared. The highest oil content (15.22%) was observed for egg cooked in drying oven, while the lowest oil (5.195%) in egg cooked in pan. The cooking in microwave oven caused a decrease in oleic acid content (46.201%) and an increase in the amount of palmitic acid content (26.862%). In addition, the maximum oleic acid (65.837%) and minimum palmitic acid (14.015%) contents were observed in egg oil cooked in pan. Results showed that fatty acids were significantly affected by cooking method. This study confirms that the cooking processing influences the fatty acid composition of egg oils.

  5. Targeting the HER Family with Pan-HER Effectively Overcomes Resistance to Cetuximab.

    PubMed

    Iida, Mari; Bahrar, Harsh; Brand, Toni M; Pearson, Hannah E; Coan, John P; Orbuch, Rachel A; Flanigan, Bailey G; Swick, Adam D; Prabakaran, Prashanth J; Lantto, Johan; Horak, Ivan D; Kragh, Michael; Salgia, Ravi; Kimple, Randy J; Wheeler, Deric L

    2016-09-01

    Cetuximab, an antibody against the EGFR, has shown efficacy in treating head and neck squamous cell carcinoma (HNSCC), metastatic colorectal cancer, and non-small cell lung cancer (NSCLC). Despite the clinical success of cetuximab, many patients do not respond to cetuximab. Furthermore, virtually all patients who do initially respond become refractory, highlighting both intrinsic and acquired resistance to cetuximab as significant clinical problems. To understand mechanistically how cancerous cells acquire resistance, we previously developed models of acquired resistance using the H226 NSCLC and UM-SCC1 HNSCC cell lines. Cetuximab-resistant clones showed a robust upregulation and dependency on the HER family receptors EGFR, HER2, and HER3. Here, we examined pan-HER, a mixture of six antibodies targeting these receptors on cetuximab-resistant clones. In cells exhibiting acquired or intrinsic resistance to cetuximab, pan-HER treatment decreased all three receptors' protein levels and downstream activation of AKT and MAPK. This correlated with decreased cell proliferation in cetuximab-resistant clones. To determine whether pan-HER had a therapeutic benefit in vivo, we established de novo cetuximab-resistant mouse xenografts and treated resistant tumors with pan-HER. This regimen resulted in a superior growth delay of cetuximab-resistant xenografts compared with mice continued on cetuximab. Furthermore, intrinsically cetuximab-resistant HNSCC patient-derived xenograft tumors treated with pan-HER exhibited significant growth delay compared with vehicle/cetuximab controls. These results suggest that targeting multiple HER family receptors simultaneously with pan-HER is a promising treatment strategy for tumors displaying intrinsic or acquired resistance to cetuximab. Mol Cancer Ther; 15(9); 2175-86. ©2016 AACR.

  6. A Reconsideration of Pan African Orogenic Cycle in the Anti-Atlas Mountains, Morocco

    NASA Astrophysics Data System (ADS)

    Hefferan, K. P.; Soulaimani, A.; Samson, S. D.; Admou, H.; Inglis, J.; Saquaque, A.; Heywood, N. C.

    2013-12-01

    The term 'Pan African' orogeny was first proposed in 1964 for a tectonothermal event in Africa ~ 500+/- 50 Ma. Over the past 50 years, the Pan African orogeny has been extended to as much as ~1050-450 Ma and recognized in other Gondwanan continents where regional names such as Brasiliano (South America), Adelaidean (Australian) and Bearmore (Antarctica) have been applied. The Pan African time span of ~500 million years is much longer than any Phanerozoic orogeny. However, it does correlate with time ranges of well defined Phanerozoic orogenic cycles such as the Appalachian cycle, extending from ~1,100 to 250 Ma, and the Cordilleran cycle of ~350 Ma to the present. A significant difference of course is that the Appalachian orogenic cycle has long been recognized as consisting of separate Grenville, Taconic, Acadian and Alleghenian orogenies. Similarly, the Mesozoic-Cenozoic Cordilleran orogenic cycle consists of distinct Antler, Sonoma, Nevadan, Sevier, Laramide and ongoing Cascadian-Andean orogenies. Until recently, the absence of precise geochronology in West Africa has prevented a more refined analysis of individual orogenic events within the Pan-African orogenic cycle. Since 2000, precision geochronologic dating by various researchers in the Anti-Atlas Mountains, Morocco, has provided critical data by which it is now appropriate to designate a Pan African orogenic cycle consisting of three separate orogenic events. We herein propose the following distinct orogenic events in the Anti-Atlas Mountains of Morocco: Iriri-Tichibanine orogeny (750-700 Ma), Bou Azzer orogeny (660-640 Ma) and the WACadomian orogeny (620-580 Ma). Generalized tectonic map of the Anti-Atlas Mountain inliers (Adapted from Ennih and Liégeois, 2008). Geodynamic model of the Pan African orogenic cycle in the Anti-Atlas Mountains. Modified from Walsh et al. (2012) and incorporating ideas from Thomas et al. (2002) and El Hadi et al. (2012).

  7. Role of Pan-African Structures in Intraplate Seismicity in Ghana

    NASA Astrophysics Data System (ADS)

    Attoh, K.

    2004-05-01

    The setting for intraplate seismicity in southeastern Ghana has been cited as an analog to the even more destructive earthquakes in eastern North America such as at Charleston 1886 (Sykes 1978). Although located far away from any plate boundary, major earthquakes have occurred near Accra, the capital of Ghana in 1939 (M6.4), 1964, 1969, and most recently in 1997 (M4.8) and 2003 (M3.8). The setting for this seismic activity, near the eastern termination of the Romanche Fracture Zone (RFZ), presents the opportunity to investigate the relationship among Pan-African (Neoproterozoic) orogenic structures, transform tectonics, and neotectonic activity. Across the Ghana seismic zone prominent structures of the Pan-African orogen include: i) the Pan-African front (PF) representing the western limit of deformation, ii) the Pan-African suture zone (PS) represented by a ductile shear zone at the base of mafic granulites which comprise the suture zone nappes, and iii) a dexteral shear zone that projects into the RFZ represented by a prominent submarine canyon. Epicentral data compiled from local and teleseismic networks reveal clusters along the PF, a remarkable alignment of epicenters along the PS, and events along the coastline parallel Accra fault. Seismic reflection data offshore Ghana confirm active displacement along the Accra fault and, for the first time, provide direct evidence for neotectonic activity along the Pan-African front. The normal sense of displacement along the PF, inferred from the seismic sections, suggests that reactivation of the Pan-African structures involved inversion. The available data provide no support for active tectonics associated with the termination of the RFZ. However, reported seismic activity along the conjugate margin in northeastern Brazil suggests that far-field stresses related to active plate displacements in the Atlantic may contribute to the intraplate seismicity on these nominally passive paleo-transform margins.

  8. Integration of PanDA workload management system with Titan supercomputer at OLCF

    NASA Astrophysics Data System (ADS)

    De, K.; Klimentov, A.; Oleynik, D.; Panitkin, S.; Petrosyan, A.; Schovancova, J.; Vaniachine, A.; Wenaus, T.

    2015-12-01

    The PanDA (Production and Distributed Analysis) workload management system (WMS) was developed to meet the scale and complexity of LHC distributed computing for the ATLAS experiment. While PanDA currently distributes jobs to more than 100,000 cores at well over 100 Grid sites, the future LHC data taking runs will require more resources than Grid computing can possibly provide. To alleviate these challenges, ATLAS is engaged in an ambitious program to expand the current computing model to include additional resources such as the opportunistic use of supercomputers. We will describe a project aimed at integration of PanDA WMS with Titan supercomputer at Oak Ridge Leadership Computing Facility (OLCF). The current approach utilizes a modified PanDA pilot framework for job submission to Titan's batch queues and local data management, with light-weight MPI wrappers to run single threaded workloads in parallel on Titan's multicore worker nodes. It also gives PanDA new capability to collect, in real time, information about unused worker nodes on Titan, which allows precise definition of the size and duration of jobs submitted to Titan according to available free resources. This capability significantly reduces PanDA job wait time while improving Titan's utilization efficiency. This implementation was tested with a variety of Monte-Carlo workloads on Titan and is being tested on several other supercomputing platforms. Notice: This manuscript has been authored, by employees of Brookhaven Science Associates, LLC under Contract No. DE-AC02-98CH10886 with the U.S. Department of Energy. The publisher by accepting the manuscript for publication acknowledges that the United States Government retains a non-exclusive, paid-up, irrevocable, world-wide license to publish or reproduce the published form of this manuscript, or allow others to do so, for United States Government purposes.

  9. Evaluation of Common Methods for Sampling Invertebrate Pollinator Assemblages: Net Sampling Out-Perform Pan Traps

    PubMed Central

    Popic, Tony J.; Davila, Yvonne C.; Wardle, Glenda M.

    2013-01-01

    Methods for sampling ecological assemblages strive to be efficient, repeatable, and representative. Unknowingly, common methods may be limited in terms of revealing species function and so of less value for comparative studies. The global decline in pollination services has stimulated surveys of flower-visiting invertebrates, using pan traps and net sampling. We explore the relative merits of these two methods in terms of species discovery, quantifying abundance, function, and composition, and responses of species to changing floral resources. Using a spatially-nested design we sampled across a 5000 km2 area of arid grasslands, including 432 hours of net sampling and 1296 pan trap-days, between June 2010 and July 2011. Net sampling yielded 22% more species and 30% higher abundance than pan traps, and better reflected the spatio-temporal variation of floral resources. Species composition differed significantly between methods; from 436 total species, 25% were sampled by both methods, 50% only by nets, and the remaining 25% only by pans. Apart from being less comprehensive, if pan traps do not sample flower-visitors, the link to pollination is questionable. By contrast, net sampling functionally linked species to pollination through behavioural observations of flower-visitation interaction frequency. Netted specimens are also necessary for evidence of pollen transport. Benefits of net-based sampling outweighed minor differences in overall sampling effort. As pan traps and net sampling methods are not equivalent for sampling invertebrate-flower interactions, we recommend net sampling of invertebrate pollinator assemblages, especially if datasets are intended to document declines in pollination and guide measures to retain this important ecosystem service. PMID:23799127

  10. Comparison of PAN and Black Carbon Levels in Mexico City: 1997 and 2003

    NASA Astrophysics Data System (ADS)

    Gaffney, J. S.; Marley, N. A.

    2004-12-01

    Peroxyacetyl nitrate (PAN) is a secondary oxidant formed by the oxidation of hydrocarbons in the presence of nitrogen dioxide. PAN is a good indicator compound for hydrocarbon reactivity that leads to ozone formation. Black carbon (BC) is formed by incomplete combustion processes such as diesel soot formation and is a good indicator of primary carbonaceous aerosols in urban areas. We used a fast-response luminol method to measure PAN and BC during the Mexico City Metropolitan Area 2003/Mexico City Megacity 2003 field study in April 2003. We compare these results with our previous PAN measurements in Mexico City during February 1997, made with a gas chromatograph-electron capture detector system. The decreased PAN levels observed in 2003 are consistent with the application of emissions controls on spark ignition gasoline-fueled vehicles, leading to lower levels of the nitrogen oxides and reactive volatile hydrocarbons needed to form PAN. Black carbon data for Mexico City in 2003, taken with a seven-channel aethalometer, are compared with data from 1997, estimated from thermal analyses as elemental carbon (EC). The comparison indicates little change in the levels of BC/EC over the six-year period. This observation is consistent with the application of minimal controls to diesel engines, the likely major source of BC in the Mexico City megacity complex during this period. The authors wish to thank the researchers at Centro Nacional de Investigación en Calidad Ambiental (CENICA), Mexico City. This work was supported by the U.S. Department of Energy, Atmospheric Science Program. We also wish to acknowledge Drs. Mario and Luisa Molina for their help in organizing and directing the Mexico City Metropolitan Area 2003 field study, during which these data were collected.

  11. Evaluation of common methods for sampling invertebrate pollinator assemblages: net sampling out-perform pan traps.

    PubMed

    Popic, Tony J; Davila, Yvonne C; Wardle, Glenda M

    2013-01-01

    Methods for sampling ecological assemblages strive to be efficient, repeatable, and representative. Unknowingly, common methods may be limited in terms of revealing species function and so of less value for comparative studies. The global decline in pollination services has stimulated surveys of flower-visiting invertebrates, using pan traps and net sampling. We explore the relative merits of these two methods in terms of species discovery, quantifying abundance, function, and composition, and responses of species to changing floral resources. Using a spatially-nested design we sampled across a 5000 km(2) area of arid grasslands, including 432 hours of net sampling and 1296 pan trap-days, between June 2010 and July 2011. Net sampling yielded 22% more species and 30% higher abundance than pan traps, and better reflected the spatio-temporal variation of floral resources. Species composition differed significantly between methods; from 436 total species, 25% were sampled by both methods, 50% only by nets, and the remaining 25% only by pans. Apart from being less comprehensive, if pan traps do not sample flower-visitors, the link to pollination is questionable. By contrast, net sampling functionally linked species to pollination through behavioural observations of flower-visitation interaction frequency. Netted specimens are also necessary for evidence of pollen transport. Benefits of net-based sampling outweighed minor differences in overall sampling effort. As pan traps and net sampling methods are not equivalent for sampling invertebrate-flower interactions, we recommend net sampling of invertebrate pollinator assemblages, especially if datasets are intended to document declines in pollination and guide measures to retain this important ecosystem service.

  12. The Pan American Health Organization's first 100 years: reflections of the Director.

    PubMed

    Alleyne, George A O

    2002-12-01

    The Pan American Health Organization (PAHO) has responded to changing political times and different health challenges and has played a significant role in some of the recent achievements in health in the region of the Americas. Some of the more remarkable health gains of the past 8 years owe their success to the broad principles of equity and Pan-Americanism that guide PAHO's work. The production and use of scientific-technical information is the fundamental underpinning of the technical cooperation that has facilitated the health work of countries. The future is bright for PAHO's next century.

  13. The Pan American Health Organization’s First 100 Years: Reflections of the Director

    PubMed Central

    Alleyne, George A. O.

    2002-01-01

    The Pan American Health Organization (PAHO) has responded to changing political times and different health challenges and has played a significant role in some of the recent achievements in health in the region of the Americas. Some of the more remarkable health gains of the past 8 years owe their success to the broad principles of equity and Pan-Americanism that guide PAHO’s work. The production and use of scientific–technical information is the fundamental underpinning of the technical cooperation that has facilitated the health work of countries. The future is bright for PAHO’s next century. PMID:12453802

  14. Token transfers among great apes (Gorilla gorilla, Pongo pygmaeus, Pan paniscus, and Pan troglodytes): species differences, gestural requests, and reciprocal exchange.

    PubMed

    Pelé, Marie; Dufour, Valérie; Thierry, Bernard; Call, Josep

    2009-11-01

    Great apes appear to be the nonhuman primates most capable of recognizing trading opportunities and engaging in transfers of commodities with conspecifics. Spontaneous exchange of goods between them has not yet been reported. We tested gorillas (Gorilla gorilla), orangutans (Pongo pygmaeus), bonobos (Pan paniscus), and chimpanzees (Pan troglodytes) in a token-exchange task involving two conspecifics and a human experimenter. Tested in pairs, subjects had to exchange tokens with a partner to obtain food from the experimenter. We observed 4, 5, 264, and 328 transfers of tokens in gorillas, chimpanzees, orangutans, and bonobos, respectively. Most gifts were indirect in gorillas, chimpanzees, and bonobos, whereas most were direct in orangutans. The analysis showed no evidence of calculated reciprocity in interactions. A main finding of the study was the high rate of repeated gifts and begging gestures recorded in orangutans. This raises the question of the meaning of pointing in great apes and their ability to understand the communicative intent of others.

  15. Tracking the displacement of objects: a series of tasks with great apes (Pan troglodytes, Pan paniscus, Gorilla gorilla, and Pongo pygmaeus) and young children (Homo sapiens).

    PubMed

    Barth, Jochen; Call, Josep

    2006-07-01

    The authors administered a series of object displacement tasks to 24 great apes and 24 30-month-old children (Homo sapiens). Objects were placed under 1 or 2 of 3 cups by visible or invisible displacements. The series included 6 tasks: delayed response, inhibition test, A not B, rotations, transpositions, and object permanence. Apes and children solved most tasks performing at comparable levels except in the transposition task, in which apes performed better than children. Ape species performed at comparable levels in all tasks except in single transpositions, in which chimpanzees (Pan troglodytes) and bonobos (Pan paniscus) performed better than gorillas (Gorilla gorilla) and orangutans (Pongo pygmeaus). All species found nonadjacent trials and rotations especially difficult. The number of elements that changed locations, the type of displacement, and having to inhibit predominant reaching responses were factors that negatively affected the subjects' performance.

  16. How the great apes (Pan troglodytes, Pongo pygmaeus, Pan paniscus, and Gorilla gorilla) perform on the reversed contingency task: the effects of food quantity and food visibility.

    PubMed

    Vlamings, Petra H J M; Uher, Jana; Call, Josep

    2006-01-01

    S. T. Boysen and G. G. Berntson (1995) found that chimpanzees performed poorly on a reversed contingency task in which they had to point to the smaller of 2 food quantities to acquire the larger quantity. The authors compared the performance of 4 great ape species (Pan troglodytes, Pongo pygmaeus, Pan paniscus, and Gorilla gorilla) on the reversed contingency task while manipulating food quantity (0-4 or 1-4) and food visibility (visible pairs or covered pairs). Results showed no systematic species differences but large individual differences. Some individuals of each species were able to solve the reversed contingency task. Both quantity and visibility of the food items had a significant effect on performance. Subjects performed better when the disparity between quantities was smaller and the quantities were not directly visible.

  17. 76 FR 362 - Pan American Energy, LLC ; Supplemental Notice That Initial Market-Based Rate Filing Includes...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-04

    ... From the Federal Register Online via the Government Publishing Office DEPARTMENT OF ENERGY Federal Energy Regulatory Commission Pan American Energy, LLC ; Supplemental Notice That Initial Market-Based... supplemental notice in the above-referenced proceeding of Pan American Energy, LLC's application for...

  18. Effect of the rate of temperature increase on water quality during heating in electromagnetic- and gas-heated pans.

    PubMed

    Hiratsuka, Hiroshi; Sasaki, Ken

    2004-04-01

    More rapid increases in the pH value and hardness during electromagnetic heating of a pan of water were observed than when the pan was heated by LNG or LPG. The water quality changed universally in several tap water samples across Japan. This quality change was closely correlated with the rate of temperature increase, irrespective of heating by electromagnetic induction, LNG or LPG.

  19. Curbing Early-Career Teacher Attrition: A Pan-Canadian Document Analysis of Teacher Induction and Mentorship Programs

    ERIC Educational Resources Information Center

    Kutsyuruba, Benjamin; Tregunna, Leigha

    2014-01-01

    Over the past two decades, the phenomenon of teachers abandoning the profession has been noted internationally, and has increasingly caught the attention of policy makers and educational leaders. Despite this awareness, no pan-Canadian statistics or comprehensive reviews are available. This paper reports on the exploratory, pan-Canadian document…

  20. The 2.5-Dimensional Photoionization Code ``PAN'' for Modeling of Axially Symmetric Nebulae: The Distinctive Features

    NASA Astrophysics Data System (ADS)

    Rokach, Oleg V.

    2005-11-01

    A multi-purpose spectrum synthesis code ``PAN'' (``Photoionized Axisymmetric Nebula'') is presented. The code allows computing of self-consistent steady-state models of morphologically-realistic axisymmetric gaseous, dust or gas+dust envelopes. Only the main features of the code ``PAN'' are enumerated here.

  1. 40 CFR 428.90 - Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ..., dry digestion, and mechanical reclaimed rubber subcategory. 428.90 Section 428.90 Protection of... MANUFACTURING POINT SOURCE CATEGORY Pan, Dry Digestion, and Mechanical Reclaimed Rubber Subcategory § 428.90 Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory....

  2. 40 CFR 428.90 - Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ..., dry digestion, and mechanical reclaimed rubber subcategory. 428.90 Section 428.90 Protection of... MANUFACTURING POINT SOURCE CATEGORY Pan, Dry Digestion, and Mechanical Reclaimed Rubber Subcategory § 428.90 Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory....

  3. 40 CFR 428.90 - Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ..., dry digestion, and mechanical reclaimed rubber subcategory. 428.90 Section 428.90 Protection of... MANUFACTURING POINT SOURCE CATEGORY Pan, Dry Digestion, and Mechanical Reclaimed Rubber Subcategory § 428.90 Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory....

  4. 40 CFR 428.90 - Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ..., dry digestion, and mechanical reclaimed rubber subcategory. 428.90 Section 428.90 Protection of... POINT SOURCE CATEGORY Pan, Dry Digestion, and Mechanical Reclaimed Rubber Subcategory § 428.90 Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory....

  5. 40 CFR 428.90 - Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ..., dry digestion, and mechanical reclaimed rubber subcategory. 428.90 Section 428.90 Protection of... POINT SOURCE CATEGORY Pan, Dry Digestion, and Mechanical Reclaimed Rubber Subcategory § 428.90 Applicability; description of the pan, dry digestion, and mechanical reclaimed rubber subcategory....

  6. The PanCam instrument for the ExoMars 2018 rover: science objectives and instrument characteristics

    NASA Astrophysics Data System (ADS)

    Coates, A. J.; Griffiths, A. D.; Leff, C. E.; Cousins, C. R.; Jaumann, R.; Schmitz, N.; Josset, J. L.; Paar, G.; Barnes, D. P.

    2011-10-01

    The scientific objectives of the ExoMars 2018 rover are designed to answer several key questions in the search for life on Mars. The PanCam instrument will set the geological and morphological context for the mission. In this talk we will describe the PanCam scientific objectives in geology, atmospheric science and 3D vision. We will also describe the design of PanCam, which includes a stereo pair of Wide Angle Cameras (WACs), each of which has a filter wheel, and a High Resolution Camera for close up investigations. The cameras are housed in an optical bench and electrical interface is via the PanCam Interface Unit (PIU). We also discuss some results from PanCam testing during field trials.

  7. The PanCam instrument for the ExoMars 2018 rover: science objectives and instrument characteristics

    NASA Astrophysics Data System (ADS)

    Coates, A. J.; Griffiths, A. D.; Leff, C. E.; Cousins, C. R.; Jaumann, R.; Schmitz, N.; Josset, J.-L.; Paar, G.; Barnes, D. P.; PanCam Team

    2013-09-01

    The scientific objectives of the ExoMars 2018 rover are designed to answer several key questions in the search for life on Mars. The PanCam instrument will set the geological and morphological context for the mission. Here, we will describe the PanCam scientific objectives in geology, atmospheric science and 3D vision. We will also describe the design of PanCam, which includes a stereo pair of Wide Angle Cameras (WACs), each of which has a filter wheel, and a High Resolution Camera for close up investigations. The cameras are housed in an optical bench and electrical interface is via the PanCam Interface Unit (PIU). We also discuss some results from PanCam testing during field trials.

  8. Preparation of thin film nanofibrous composite NF membrane based on EDC/NHS modified PAN-AA nanofibrous substrate

    NASA Astrophysics Data System (ADS)

    Yang, Y.; Wang, X.; Hsiao, B. S.

    2016-07-01

    A novel kind of thin-film nanofibrous composite (TFNC) nanofiltration (NF) membranes consisting of a polyamide (PA) barrier layer were successfully fabricated by interfacial polymerization (IFP) based on electrospun double-layer nanofibrous substrates, which have an ultrathin poly (acrylonitrile-co-acrylic acid) (PAN-AA) nanofibrous layer as top layer and a thicker polyacrylonitrile (PAN) nanofiber layer as bottom porous support layer. Immersing PAN/PAN-AA nanofibrous substrates into 1-ethyl-(3-3-dimethylaminopropyl) carbodiimide hydrochloride/N-hydroxysuccinimide (EDC/NHS) aqueous solution and piperazine (PIP) aqueous solution (0.20 wt%) sequentially for a period of time, the carboxyl groups on PAN-AA nanofibers were activated by carbodiimide and then reacted with the amide groups. The as prepared composite membrane has an integrated structure with high rejection rate (98.0%); high permeate flux (40.4 L/m2h) for MgSO4 aqueous solution (2 g/L).

  9. TES observations of the interannual variability of PAN over Northern Eurasia and the relationship to springtime fires

    NASA Astrophysics Data System (ADS)

    Zhu, Liye; Fischer, Emily V.; Payne, Vivienne H.; Worden, John R.; Jiang, Zhe

    2015-09-01

    Peroxyacetyl nitrate (PAN) plays an important role in atmospheric chemistry through its impact on remote oxidant and nitrogen budgets. PAN is formed rapidly in boreal fire plumes through the oxidation of short-lived volatile organic compounds in the presence of nitrogen oxide radicals. Here we present new satellite observations of PAN from the Tropospheric Emission Spectrometer (TES) over northern Eurasia for April 2006-2010. We observe large interannual variability in TES PAN observations, and we show that fires are one source of this variability using (1) Moderate Resolution Imaging Spectroradiometer Mean Fire Radiative Power observations and (2) Hybrid Single-Particle Lagrangian Integrated Trajectory backward trajectories. We also show that cold springtime temperatures and enhanced vertical mixing in the lower free troposphere over northeastern Eurasia likely played a role in the detection of PAN from TES in April 2006 in this region.

  10. Fresh Insights into the Sources and Distribution of Peroxyacetyl Nitrate (PAN) from New In Situ and Satellite Observations

    NASA Astrophysics Data System (ADS)

    Fischer, E. V.; Payne, V.; Zaragoza, J.; Zhu, L.; Jiang, Z.; Worden, J.; Sive, B. C.; Zhou, Y.; Alvarado, M. J.; Abeleira, A.; Callahan, S. L.; Farmer, D. K.

    2014-12-01

    PAN (peroxyacetyl nitrate, CH3C(O)OONO2) is only one of the organic nitrogen compounds produced when hydrocarbons are oxidized in the presence of nitrogen oxide radicals (NOx = NO + NO2), but it is the most important atmospheric NOx reservoir and a critical pathway by which NOx reaches the remote troposphere to impact oxidant distributions and remote nitrogen deposition. We present the analysis of new in situ and satellite observations to highlight previously unobserved features of regional-to-global PAN distributions. Our latest in situ data were collected as part of the Front Range Air Pollution and Photochemistry Éxperiment (FRAPPÉ), which took place in the Colorado Front Range during July and August 2014. This data set serves as a case study of PAN formation where significant oil and gas production intersects a major urban-suburban region. Preliminary data, analyzed in conjunction with concurrent observations of other trace species, show extremely elevated PAN and other organic nitrogen compounds in plumes with strong oil and gas source signatures. These plumes have been observed at both suburban and remote (Rocky Mountain National Park) measurement sites. In addition, new PAN retrievals from the Tropospheric Emission Spectrometer (TES), flying on the NASA Aura satellite, can provide a more global picture of PAN. We present TES retrievals of PAN from the Northern Hemisphere over the ten-year lifetime of the Aura mission. The TES PAN dataset offers unprecedented observations of the inter-annual variability of PAN, the transpacific transport of reactive nitrogen species, and the role of biomass burning in the generation of extreme PAN abundances.

  11. Regional and hemispheric influences on measured spring peroxyacetyl nitrate (PAN) mixing ratios at the Auchencorth UK EMEP supersite

    NASA Astrophysics Data System (ADS)

    Malley, Christopher S.; Cape, J. Neil; Jones, Matthew R.; Leeson, Sarah R.; Coyle, Mhairi; Braban, Christine F.; Heal, Mathew R.; Twigg, Marsailidh M.

    2016-06-01

    This work presents 15-min averaged measurements of peroxyacetyl nitrate (PAN) obtained during spring 2014 (24/04/2014 - 06/05/2014) at the Auchencorth UK EMEP supersite (southeast Scotland). The aim of this analysis was to investigate the conditions producing the distribution of PAN mixing ratios at the supersite in spring 2014. Air mass back trajectories showed the majority of air masses to have spent substantial time over the UK, continental Europe or Scandinavia prior to arrival at Auchencorth. The median and 95th percentile PAN mixing ratios observed were 0.46 ppb and 1.03 ppb, respectively. The median mixing ratio was elevated compared with previous PAN measurements during springtime (April-May) in southeast Scotland (corresponding median mixing ratios April-May 1994-1998: 0.1-0.3 ppb), which is hypothesised to be due to conditions conducive to regional (European) photochemical PAN production. Additionally, PAN mixing ratios during regionally influenced conditions (0.4-1.5 ppb) were substantially more elevated from hemispheric background mixing ratios (0.4-0.6 ppb) than for ozone (O3, regional: 10-45 ppb, hemispheric: 30-40 ppb). PAN and O3 both impact upon vegetation and human health and it is necessary to understand the extent to which hemispheric and regional processes contribute to their abundances in different locations. Regional processes can both increase and decrease PAN and O3 mixing ratios compared to imported hemispheric background mixing ratios. This study concludes that during the measurement period in spring 2014 at the Auchencorth supersite, regional PAN and O3 modifying processes enhanced PAN mixing ratios more than for O3.

  12. Discovering Africa through Internet-Based Geographic Information Systems: A Pan-African Summit Simulation

    ERIC Educational Resources Information Center

    Milson, Andrew J.; Gilbert, Kathleen M.; Earle, Brian D.

    2007-01-01

    In the United States, people get very little news about Africa, and what news they do get is about war or famine, with little historical information or context. In this article, the authors describe how they developed and implemented a Pan-African Summit simulation project in order to give their approximately 100, 9th-grade students (in five World…

  13. Pan American Airways/Naval Air Transport Service/destroyer base site at the ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Pan American Airways/Naval Air Transport Service/destroyer base site at the east side showing walkway and building foundation. View facing west-northwest. - U.S. Naval Base, Pearl Harbor, Pearl City Peninsula, Pearl City, Honolulu County, HI

  14. Occupational Task Profiles: Canadian Literacy and Essential Skills Workforce. A Pan-Canadian Snapshot

    ERIC Educational Resources Information Center

    Harwood, Chris

    2012-01-01

    This "Pan-Canadian Snapshot" explores the competencies needed to work with adults participating in Literacy and/or Essential Skills (L/ES) programs in Canada. The purpose of the "Snapshot" is to: (1) lay a foundation from which to explore the topic of professionalism; (2) identify the types of supports that the L/ES workforce…

  15. Three pairs of bollards of Pan American Airways/Naval Air Transport ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Three pairs of bollards of Pan American Airways/Naval Air Transport Service/destroyer base site. (The third pair is visible beyond the trees). View facing south-southeast. - U.S. Naval Base, Pearl Harbor, Pearl City Peninsula, Pearl City, Honolulu County, HI

  16. Seatbelt submarining injury and its prevention countermeasures: How a cantilever seat pan structure exacerbate submarining

    PubMed Central

    Thorbole, Chandrashekhar K.

    2015-01-01

    The purpose of this study and a case report was to demonstrate seat belt webbing induced injury due to seatbelt submarining during the frontal motor vehicle crash. Submarining is an undesired phenomenon during a frontal crash scenario and is dependent on design features of the seat pan and seatbelt system. The lack of adequate anti-submarining features at any seating position with three-point restraint can cause abdominal solid and hollow organ injuries. This paper reports a case of submarining and factors that exacerbated this phenomenon leading to critical occupant abdominal injury. This case report and the following injury causation analysis demonstrate the shortcomings of a cantilever seat pan design in context to the occupant safety. The inadequate seat pan anti-submarining feature in association with lack of seatbelt load-limiter and Pretensioner reduces the level of occupant protection offered by the seat belt system in the rear seat. This case report shows the dangers of cantilever seat pan design and its association with increased risk of submarining causing severe abdominal injuries. PMID:26985421

  17. The Pan-STARRS data server and integrated data query tool

    NASA Astrophysics Data System (ADS)

    Guo, Jhen-Kuei; Chen, Wen-Ping; Lin, Chien-Cheng; Chen, Ying-Tung; Lin, Hsing-Wen

    2013-06-01

    The Pan-STARRS project is operated by an international consortium. Located in Haleakala, Hawaii, the Pan-STARRS telescope system patrols the entire visible sky several times a month, with an aim to identify and characterize varying celestial objects of phenomena or in brightness (supernovae, novae, variable stars, etc) or in position (comets, asteroids, near-earth objects, X-planet etc.) PS1 science mission has started officially from May, 2010 and expects to end in the end of 2013. As of early 2012, every patch of sky observable from Hawaii has been observed in at least 5 bands (g', r', i', z', y') for 5 to 40 epochs. We have set up a data depository at NCU to serve the users in Taiwan. The massive amounts of Pan-STARRS data are downloaded via Internet from the Institute for Astronomy, University of Hawaii whenever new observations are obtained and processed. So far we have stored a total of 200 TB worth of data. In addition to star/galaxy catalogs, a postage stamp server provides access to FITS images. The Pan-STARRS Published Science Products Subsystem (PSPS) has recently passed its operational readiness, that provides users to query individual PS1 measurements. Here we present the data query tool to interface with the PS1 catalogs and postage stamp images, together with other complementary databases such as 2MASS and other data at IRSA (NASA/IPAC Infrared Science Archive).

  18. The Pan African E-Network Project: A New Learning Culture

    ERIC Educational Resources Information Center

    Suniti, Nundoo-Ghoorah; Tara, Joyejob

    2012-01-01

    This paper sets out to explore the paradigm shift in learning culture brought about by the advent of online learning in the mostly print-based ODL system at the Mauritius College of the Air (MCA). It delves into the perceptions of learners and MCA staff involved in a range of undergraduate to Master's programmes forming part of the Pan African…

  19. Gel Spun PAN/CNT Based Carbon Fibers with Honey-Comb Cross-Section

    DTIC Science & Technology

    2013-11-13

    stabilization of precursor fibers. Methods used to manufacture hollow carbon fibers include co-axial electrospinning and post treatment [14], bi...GPa and 249 GPa, respectively. Lee et al. [21], reported manufacture of hollow carbon fibers from PAN based precursors using electrospinning . Styrene

  20. On the theory relating changes in area-average and pan evaporation (Invited)

    NASA Astrophysics Data System (ADS)

    Shuttleworth, W.; Serrat-Capdevila, A.; Roderick, M. L.; Scott, R.

    2009-12-01

    Theory relating changes in area-average evaporation with changes in the evaporation from pans or open water is developed. Such changes can arise by Type (a) processes related to large-scale changes in atmospheric concentrations and circulation that modify surface evaporation rates in the same direction, and Type (b) processes related to coupling between the surface and atmospheric boundary layer (ABL) at the landscape scale that usually modify area-average evaporation and pan evaporation in different directions. The interrelationship between evaporation rates in response to Type (a) changes is derived. They have the same sign and broadly similar magnitude but the change in area-average evaporation is modified by surface resistance. As an alternative to assuming the complementary evaporation hypothesis, the results of previous modeling studies that investigated surface-atmosphere coupling are parameterized and used to develop a theoretical description of Type (b) coupling via vapor pressure deficit (VPD) in the ABL. The interrelationship between appropriately normalized pan and area-average evaporation rates is shown to vary with temperature and wind speed but, on average, the Type (b) changes are approximately equal and opposite. Long-term Australian pan evaporation data are analyzed to demonstrate the simultaneous presence of Type (a) and (b) processes, and observations from three field sites in southwestern USA show support for the theory describing Type (b) coupling via VPD. England's victory over Australia in 2009 Ashes cricket test match series will not be mentioned.

  1. Two Causes of Underachievement--The Scapegoat Phenomenon and the Peter Pan Syndrome. Part II.

    ERIC Educational Resources Information Center

    Grau, Phyllis Nelson

    1986-01-01

    Two profiles of underachievement are described: the Peter Pan Syndrome, characterized by irresponsibility, anxiety, loneliness, sex role conflict, and narcissism, and the scapegoating phenomenon, in which children acquire negative self-images from victimization experiences. Prognoses and recommendations for each are offered. (Author/CL)

  2. Intentionality as Measured in the Persistence and Elaboration of Communication by Chimpanzees (Pan troglodytes)

    ERIC Educational Resources Information Center

    Leavens, David A.; Russell, Jamie L.; Hopkins, William D.

    2005-01-01

    In human infancy, 2 criteria for intentional communication are (a) persistence in and (b) elaboration of communication when initial attempts to communicate fail. Twenty-nine chimpanzees (Pan troglodytes) were presented with both desirable (a banana) and undesirable food (commercial primate chow). Three conditions were administered: (a) the banana…

  3. Preparation and characterization of Co/PAN-based carbon fibrous composites

    NASA Astrophysics Data System (ADS)

    Zhixin, J.; Yongyi, Y.; Gang, J.

    2011-07-01

    The cobalt/polyacrylonitrile (Co/PAN)-based carbon fibrous composites were prepared. The PAN incorporated with cobalt ions was in situ polymerized by initiating the complex solution of acrylonitrile (AN)/cobalt (II) chloride (CoCl2) in which the contents of cobalt ions were 0 wt.%, 0.29 wt.%, 0.56 wt.% and 1.14 wt.%, respectively. The ultrathin blue fibers were formed from the cobalt/PAN composites by the electrospinning method. The electrospun cobalt-incorporated PAN fibers were successfully stabilized in air and subsequently carbonized to form the carbon fibrous composites in a nitrogen (N2) atmosphere. Based on the scanning electron microscopy (SEM), we noticed that beads and beaded fibers were produced during the electrospinning process. When the content of cobalt ions in the complex solution was as high as 1.14 wt.%, there were many honeycomb-like structures and nanopores formed in both stabilized and carbonized fibers. The X-ray photoelectron spectra (XPS) were used to characterize the structure of the composite fibers.

  4. Spatial Construction Skills of Chimpanzees ("Pan Troglodytes") and Young Human Children ("Homo Sapiens Sapiens")

    ERIC Educational Resources Information Center

    Poti, Patrizia; Hayashi, Misato; Matsuzawa, Tetsuro

    2009-01-01

    Spatial construction tasks are basic tests of visual-spatial processing. Two studies have assessed spatial construction skills in chimpanzees (Pan troglodytes) and young children (Homo sapiens sapiens) with a block modelling task. Study 1a subjects were three young chimpanzees and five adult chimpanzees. Study 1b subjects were 30 human children…

  5. Civic Responsibility and Human Rights Education: A Pan-Educational Alliance for Social Justice

    ERIC Educational Resources Information Center

    Osanloo, Azadeh F.

    2009-01-01

    Educating global citizens to have knowledge of world political and economic systems and conditions is imperative as the notion of the "citizen" is constantly evolving. This type of civic education needs to involve critical thinking skills that are pan-educational and allow for cross-cultural discussion that span all public spheres and…

  6. Evolution of the ATLAS PanDA Production and Distributed Analysis System

    SciTech Connect

    Maeno, T.; De, K.; Wenaus, T.; Nilsson, P.; Walker, R.; Stradling, A.; Fine, V.; Potekhin, M.; Panitkin, S.; Compostella, G.

    2012-12-13

    Evolution of the ATLAS PanDA Production and Distributed Analysis System T Maeno1,5, K De2, T Wenaus1, P Nilsson2, R Walker3, A Stradling2, V Fine1, M Potekhin1, S Panitkin1 and G Compostella4 Published under licence by IOP Publishing Ltd Journal of Physics: Conference Series, Volume 396, Part 3 Article PDF References Citations Metrics 101 Total downloads Cited by 8 articles Turn on MathJax Share this article Article information Abstract The PanDA (Production and Distributed Analysis) system has been developed to meet ATLAS production and analysis requirements for a data-driven workload management system capable of operating at LHC data processing scale. PanDA has performed well with high reliability and robustness during the two years of LHC data-taking, while being actively evolved to meet the rapidly changing requirements for analysis use cases. We will present an overview of system evolution including automatic rebrokerage and reattempt for analysis jobs, adaptation for the CernVM File System, support for the multi-cloud model through which Tier-2 sites act as members of multiple clouds, pledged resource management and preferential brokerage, and monitoring improvements. We will also describe results from the analysis of two years of PanDA usage statistics, current issues, and plans for the future.

  7. Biomonitoring of peroxyacetyl nitrate (PAN) and ozone with indicator plant set

    SciTech Connect

    Sun, E.J.; Cheng, M.L.

    1997-12-31

    Studies on the responses of several indicator plants to peroxyacetyl nitrate (PAN) and ozone during the past four years in the exposure chambers and in the greenhouse in Taiwan showed that some indicator plant sets were suitable for biomonitoring these two pollutants. Four plant species including Sword-leaf lettuce, black nightshade (Solanum nigrum), quickweed (Galinsoga parviflora) and Double-fortune tomato were recommended for use in together to monitor both PAN and ozone simultaneously. Some of the plants were from tissue culture to increase the genetic uniformity. There was no sensitivity difference between the tissue culture plantlets and the seed-grown plants. The specific symptoms of bronzing, silvering and glazing as expressed on lettuce, black nightshade or quickweed can be used as indication if PAN concentrations over 4--5 ppbv in Taiwan. Whereas the fleck and stippling on tomato leaves indicated that ozone was at least over 50 ppbv. Totally about 30 indicator plant stations had been set up in four major urban areas (Taipei, Taichung, Chayi, and Kaohsiung) to comprehensively monitor the occurrence of PAN and ozone in the atmosphere. A standardized procedure for cultivating the plants was established. As the cost is low, the operation is easy, and no electric power is needed, the application of this technique is very promising, especially in the developing countries.

  8. Population Screening Using Sewage Reveals Pan-Resistant Bacteria in Hospital and Community Samples

    PubMed Central

    Mileguir, Fernando; Azar, Roberto; Smollan, Gill; Belausov, Natasha; Rahav, Galia; Shamiss, Ari; Mendelson, Ella; Keller, Nathan

    2016-01-01

    The presence of pan-resistant bacteria worldwide possesses a threat to global health. It is difficult to evaluate the extent of carriage of resistant bacteria in the population. Sewage sampling is a possible way to monitor populations. We evaluated the presence of pan-resistant bacteria in Israeli sewage collected from all over Israel, by modifying the pour plate method for heterotrophic plate count technique using commercial selective agar plates. This method enables convenient and fast sewage sampling and detection. We found that sewage in Israel contains multiple pan-resistant bacteria including carbapenemase resistant Enterobacteriacae carrying blaKPC and blaNDM-1, MRSA and VRE. blaKPC carrying Klebsiella pneumonia and Enterobacter cloacae were the most common Enterobacteriacae drug resistant bacteria found in the sewage locations we sampled. Klebsiella pneumonia, Enterobacter spp., Escherichia coli and Citrobacter spp. were the 4 main CRE isolated from Israeli sewage and also from clinical samples in our clinical microbiology laboratory. Hospitals and Community sewage had similar percentage of positive samplings for blaKPC and blaNDM-1. VRE was found to be more abundant in sewage in Israel than MRSA but there were more locations positive for MRSA and VRE bacteria in Hospital sewage than in the Community. Therefore, our upgrade of the pour plate method for heterotrophic plate count technique using commercial selective agar plates can be a useful tool for routine screening and monitoring of the population for pan-resistant bacteria using sewage. PMID:27780222

  9. The Steel Band Game Plan: Strategies for Starting, Building, and Maintaining Your Pan Program

    ERIC Educational Resources Information Center

    Tanner, Chris

    2006-01-01

    This book is the first comprehensive resource devoted to steel band pedagogy, it is a must-have for anyone involved in the steel band idiom today. Written primarily for educators, the book addresses a wide variety of topics, including instrumentation, personnel, basic pan technique, repertoire, and rehearsal strategies. This informative text…

  10. Developing a Competency-Based Pan-European Accreditation Framework for Health Promotion

    ERIC Educational Resources Information Center

    Battel-Kirk, Barbara; Van der Zanden, Gerard; Schipperen, Marielle; Contu, Paolo; Gallardo, Carmen; Martinez, Ana; Garcia de Sola, Silvia; Sotgiu, Alessandra; Zaagsma, Miriam; Barry, Margaret M.

    2012-01-01

    Background: The CompHP Pan-European Accreditation Framework for Health Promotion was developed as part of the CompHP Project that aimed to develop competency-based standards and an accreditation system for health promotion practice, education, and training in Europe. Method: A phased, multiple-method approach was employed to facilitate consensus…

  11. 75 FR 61502 - Cooperative Agreement With the Pan American Health Organization for the Development of an...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-10-05

    ... presented in such a way that ensures consistency of terminology, consistency in data collection methods, and... aspects relating to medical products and related regulatory processes and systems including harmonization efforts, such as the Pan American Network for Drug Regulatory Harmonization (PANDRH), the ICH...

  12. ESA ExoMars: Pre-launch PanCam Geometric Modeling and Accuracy Assessment

    NASA Astrophysics Data System (ADS)

    Li, D.; Li, R.; Yilmaz, A.

    2014-08-01

    ExoMars is the flagship mission of the European Space Agency (ESA) Aurora Programme. The mobile scientific platform, or rover, will carry a drill and a suite of instruments dedicated to exobiology and geochemistry research. As the ExoMars rover is designed to travel kilometres over the Martian surface, high-precision rover localization and topographic mapping will be critical for traverse path planning and safe planetary surface operations. For such purposes, the ExoMars rover Panoramic Camera system (PanCam) will acquire images that are processed into an imagery network providing vision information for photogrammetric algorithms to localize the rover and generate 3-D mapping products. Since the design of the ExoMars PanCam will influence localization and mapping accuracy, quantitative error analysis of the PanCam design will improve scientists' awareness of the achievable level of accuracy, and enable the PanCam design team to optimize its design to achieve the highest possible level of localization and mapping accuracy. Based on photogrammetric principles and uncertainty propagation theory, we have developed a method to theoretically analyze how mapping and localization accuracy would be affected by various factors, such as length of stereo hard-baseline, focal length, and pixel size, etc.

  13. Single-Pan Balances, Buoyancy, and Gravity or "A Mass of Confusion."

    ERIC Educational Resources Information Center

    Battino, Rubin; Williamson, Arthur G.

    1984-01-01

    Discusses problems and pitfalls of working with single-pan balances and methods used to advertise their accuracy. Investigated manufacturers knowledge of buoyancy effects, relating provisions and recommendations made by various companies. Provides a routine for intercalibration of weight using dummy weights of approximately known mass. (JM)

  14. Long-Term Trends of Pan Evaporation and an Analysis of Its Causes in Finland

    NASA Astrophysics Data System (ADS)

    Moroizumi, T.; Ito, N.; Koskiaho, J.; Tattari, S.

    2014-12-01

    The recent global warming affects the evapotranspiration which is an important factor of hydrologic cycle and water resources management. Many of the previous studies have reported the decreasing trends of pan evaporation in the area of the continental climate of the middle latitude. However, few studies in the region in a high latitude area such as Finland haven't been carried out so far. The purpose of this study is to investigate the long term variations of pan evaporation in Finland located in high latitude using a trend analysis. The causes of the trends of pan evaporation were discussed from two points of view: a complementary relationship and Penman's equation (1948). The results were summarized as follows: (1) The variations of pan evaporation showed decreasing trends at 5 stations and increasing ones at 2 stations. (2) The mechanistic causes for the decreasing trends at 5 stations were mainly the increases of precipitation and the aerodynamic term in Penman's equation. (3) The mechanistic causes for the increasing trends at 2 stations couldn't be revealed. H. L. Penman. 1948. Natural evaporation from open water, bare soil and grass, Proceedings of the Royal Society of London, Series A, Mathematical and Physical Science, 193, 1032, 129-145.

  15. Two Is the Beginning of the End: "Peter Pan" and the Doctrine of Reminiscence

    ERIC Educational Resources Information Center

    Hudson, Glenda A.

    2006-01-01

    This article considers J.M. Barrie's satirical treatment of the Platonic doctrine of reminiscence in "Peter Pan," and how Barrie's work both honors and undercuts it. It will first analyze the Platonic notion of the doctrine of reminiscence in Wordsworth's "Ode: Intimations of Immortality from Recollections of Early Childhood" (1807). It will then…

  16. Theoretical evaluation of a V/STOL fighter model utilizing the PAN AIR code

    NASA Technical Reports Server (NTRS)

    Howell, G. A.; Bhateley, I. C.

    1982-01-01

    The PAN AIR computer code was investigated as a tool for predicting closely coupled aerodynamic and propulsive flowfields of arbitrary configurations. The NASA/Ames V/STOL fighter model, a configuration of complex geometry, was analyzed with the PAN AIR code. A successful solution for this configuration was obtained when the nozzle exit was treated as an impermeable surface and no wakes were included around the nozzle exit. When separated flow was simulated from the end of the nacelle, requiring the use of wake networks emanating from the nozzle exit, a number of problems were encountered. A circular body nacelle model was used to investigate various techniques for simulating the exhaust plume in PAN AIR. Several approaches were tested and eliminated because they could not correctly simulate the interference effects. Only one plume modeling technique gave good results. A PAN AIR computation that used a plume shape and inflow velocities obtained from the Navier-Stokes solution for the plume produced results for the effects of power that compared well with experimental data.

  17. Education, Internationalism and Empire at the 1928 and 1930 Pan-Pacific Women's Conferences

    ERIC Educational Resources Information Center

    Goodman, Joyce

    2014-01-01

    In order to explore education at the first two Pan-Pacific Women's Conferences, this article builds on Campbell and Sherington's account of education in Oceania and on empirical research undertaken by Selleck and others, along with relevant primary source material. It traces elements of empire as they played out in inter-war women's education and…

  18. Measurement of Peroxyacetyl Nitrate (PAN), Peroxypropionyl Nitrate (PPN) and Peroxymethacryloyl Nitrate (MPAN) during TRACE-P

    NASA Technical Reports Server (NTRS)

    Flocke, Frank; Weinheimer, Andrew J.

    2003-01-01

    In Fall 2000, the PANs gas chromatograph (GC) was improved and prepared for installation on the NASA P-3. A number of experiments were conducted in conjunction with the NCAR NO,, instrument (B. Ridley) to settle some of the fine details of the output of the calibration system for each instrument. In addition, the sampling frequency was improved.

  19. Demonstrating a Lack of Reactivity Using a Teflon-Coated Pan.

    ERIC Educational Resources Information Center

    Richmond, Thomas G.

    1995-01-01

    Illustrates the chemical resistance of polytetrafluoroethene to mineral acids using an ordinary Teflon-coated frying pan. The demonstration can also be used to lead to a discussion of the long lifetimes of fluorocarbons and chlorofluorocarbons in the atmosphere and their roles in the breakdown of the ozone layer. (AIM)

  20. Porting and using PanGIA for Cytoscape 3: challenges and solutions

    PubMed Central

    Welker, David; Demchak, Barry

    2014-01-01

    Much of the biologically significant functionality in Cytoscape is contained within third-party add-ons, called plugins in Cytoscape 2 and apps in Cytoscape 3. In the transition from Cytoscape 2 to Cystoscape 3, some of the underlying assumptions upon which plugins relied changed, requiring a significant porting effort for plugins to work as Cytoscape 3 apps. PanGIA is a Cytoscape add-on (http://apps.cytoscape.org/apps/pangia) designed to analyze and visualize genetic interaction data in light of physical interaction data. In order to convert the PanGIA plugin to an app, various challenges, including those related to a transformed data model, concurrency, and randomization had to be overcome. In the process, the ability to control randomization was added to the GUI, a feature which was not only integral to the porting process, but which also ensures more easily reproducible scientific analysis for PanGIA users. Most authors of Cytoscape 2 plugins will face similar challenges porting their software to work with Cytoscape 3, and this paper gives details of how the PanGIA port addressed them. PMID:25075307

  1. "Manana Is Soon Enough for Me": Latin America through Tin Pan Alley's Prism.

    ERIC Educational Resources Information Center

    Aiex, Nola Kortner

    In order to examine the vision of Latin America transmitted to the American public in Tin Pan Alley's popular songs in the first half of the twentieth century, a study analyzed nearly 50 songs. The songs were grouped into five categories: (1) songs which describe Latin locales; (2) songs which are constructed around a Latin woman's name; (3) songs…

  2. Integration Of PanDA Workload Management System With Supercomputers for ATLAS and Data Intensive Science

    NASA Astrophysics Data System (ADS)

    Klimentov, A.; De, K.; Jha, S.; Maeno, T.; Nilsson, P.; Oleynik, D.; Panitkin, S.; Wells, J.; Wenaus, T.

    2016-10-01

    The.LHC, operating at CERN, is leading Big Data driven scientific explorations. Experiments at the LHC explore the fundamental nature of matter and the basic forces that shape our universe. ATLAS, one of the largest collaborations ever assembled in the sciences, is at the forefront of research at the LHC. To address an unprecedented multi-petabyte data processing challenge, the ATLAS experiment is relying on a heterogeneous distributed computational infrastructure. The ATLAS experiment uses PanDA (Production and Data Analysis) Workload Management System for managing the workflow for all data processing on over 150 data centers. Through PanDA, ATLAS physicists see a single computing facility that enables rapid scientific breakthroughs for the experiment, even though the data centers are physically scattered all over the world. While PanDA currently uses more than 250,000 cores with a peak performance of 0.3 petaFLOPS, LHC data taking runs require more resources than grid can possibly provide. To alleviate these challenges, LHC experiments are engaged in an ambitious program to expand the current computing model to include additional resources such as the opportunistic use of supercomputers. We will describe a project aimed at integration of PanDA WMS with supercomputers in United States, in particular with Titan supercomputer at Oak Ridge Leadership Computing Facility. Current approach utilizes modified PanDA pilot framework for job submission to the supercomputers batch queues and local data management, with light-weight MPI wrappers to run single threaded workloads in parallel on LCFs multi-core worker nodes. This implementation was tested with a variety of Monte-Carlo workloads on several supercomputing platforms for ALICE and ATLAS experiments and it is in full pro duction for the ATLAS since September 2015. We will present our current accomplishments with running PanDA at supercomputers and demonstrate our ability to use PanDA as a portal independent of the

  3. Integration Of PanDA Workload Management System With Supercomputers for ATLAS and Data Intensive Science

    SciTech Connect

    De, K; Jha, S; Klimentov, A; Maeno, T; Nilsson, P; Oleynik, D; Panitkin, S; Wells, Jack C; Wenaus, T

    2016-01-01

    The Large Hadron Collider (LHC), operating at the international CERN Laboratory in Geneva, Switzerland, is leading Big Data driven scientific explorations. Experiments at the LHC explore the fundamental nature of matter and the basic forces that shape our universe, and were recently credited for the discovery of a Higgs boson. ATLAS, one of the largest collaborations ever assembled in the sciences, is at the forefront of research at the LHC. To address an unprecedented multi-petabyte data processing challenge, the ATLAS experiment is relying on a heterogeneous distributed computational infrastructure. The ATLAS experiment uses PanDA (Production and Data Analysis) Workload Management System for managing the workflow for all data processing on over 150 data centers. Through PanDA, ATLAS physicists see a single computing facility that enables rapid scientific breakthroughs for the experiment, even though the data centers are physically scattered all over the world. While PanDA currently uses more than 250,000 cores with a peak performance of 0.3 petaFLOPS, LHC data taking runs require more resources than Grid computing can possibly provide. To alleviate these challenges, LHC experiments are engaged in an ambitious program to expand the current computing model to include additional resources such as the opportunistic use of supercomputers. We will describe a project aimed at integration of PanDA WMS with supercomputers in United States, Europe and Russia (in particular with Titan supercomputer at Oak Ridge Leadership Computing Facility (OLCF), MIRA supercomputer at Argonne Leadership Computing Facilities (ALCF), Supercomputer at the National Research Center Kurchatov Institute , IT4 in Ostrava and others). Current approach utilizes modified PanDA pilot framework for job submission to the supercomputers batch queues and local data management, with light-weight MPI wrappers to run single threaded workloads in parallel on LCFs multi-core worker nodes. This implementation

  4. Present and past microbial life in continental salt pan sediments in Southern Africa

    NASA Astrophysics Data System (ADS)

    Genderjahn, Steffi; Mangelsdorf, Kai; Alawi, Mashal; Kallmeyer, Jens; Wagner, Dirk

    2015-04-01

    The southwestern African region is characterized by strong climate variability. To get a better understanding on the climate evolution and environmental condition in Namibia and South Africa, terrestrial climate archives are investigated. Since there are almost no lakes, continental salt pans represent the only terrestrial geoarchives with the potential to preserve climate signals during sediment deposition. Climate has a strong impact on the salt pan ecosystem, causing adaptation of salt pan microorganisms to varying temperature, precipitation and salinity conditions. To reconstruct climate variability during the Holocene, the composition, diversity and abundance of indigenous microbial communities with depth and related to different soil parameters are investigated. We are using a combined approach of microbiological and lipid biomarker analyses to demonstrate the response of the microbial communities due to environmental changes. For microbiological analyses outcrops were conducted or short cores (0-100 cm) were drilled at four different salt pans in Aminuis, Koes and Witpan region having rather different geochemical properties. The current work focused on changes within the microbial communities due to the impact of long-term climate variation and the associated environmental changes and is part of the project 'Signals of climate and landscape change preserved in southern African GeoArchives' in the scope of the SPACES program, which is funded by the German Federal Ministry of Education and Research (BMBF). For a quantitative characterization of microbial communities molecular techniques such as polymerase chain reaction (PCR) and real-time quantitative PCR (qPCR) based on the 16S rRNA genes are used. Moreover, 454 sequencing technique is utilized to describe the diversity and abundance of microorganisms in detail. Soil parameters are described by standard soil scientific methods. Furthermore, microbial lipid biomarker analyses were done to characterize living

  5. Biogeomorphically driven salt pan formation in Sarcocornia-dominated salt-marshes

    NASA Astrophysics Data System (ADS)

    Escapa, Mauricio; Perillo, Gerardo M. E.; Iribarne, Oscar

    2015-01-01

    Salt-marshes are under increasing threat, particularly from sea-level rise and increased wave action associated with climate change. The development and stability of these valuable habitats largely depend on complex interactions between biotic and abiotic processes operating at different scales. Also, interactions between biotic and abiotic processes drive internal morphological change in salt-marshes. In this paper we used a biogeomorphological approach to assess the impact of biological activities and interactions on salt pan formation in Sarcocornia-dominated salt marshes. Salt pans represent a key physiographic feature of salt-marshes and recent studies hypothesized that biogeomorphic processes could be related to salt pan formation in SW Atlantic salt-marshes. The glasswort Sarcocornia perennis is one of the dominant plants in the salt-marshes of the Bahía Blanca Estuary (Argentina) where they form patches up to 8 m in diameter. These salt-marshes are also inhabited in great densities by the burrowing crab Neohelice (Chasmagnathus) granulata whose bioturbation rates are among the highest reported for salt-marshes worldwide. A set of biological interactions between N. granulata and S. perennis appears to be responsible for salt pan development in these areas which has not been described elsewhere. The main objective of this work was to determine the ecological interactions occurring between plants and crabs that lead to salt pan formation by using field-based sampling and manipulative experiments. Our results showed that S. perennis facilitated crab colonization of the salt-marsh by buffering otherwise stressful physical conditions (e.g., temperature, desiccation). Crabs preferred to construct burrows underneath plants and, once they reach high densities (up to 40 burrows m- 2), the sediment reworking caused plant die-off in the central area of patches. At this state, the patches lose elevation and become depressed due to the continuous bioturbation by crabs

  6. Peroxyacetyl nitrate (PAN) and peroxyacetic acid (PAA) measurements by iodide chemical ionisation mass spectrometry: first analysis of results in the boreal forest and implications for the measurement of PAN fluxes

    NASA Astrophysics Data System (ADS)

    Phillips, G. J.; Pouvesle, N.; Thieser, J.; Schuster, G.; Axinte, R.; Fischer, H.; Williams, J.; Lelieveld, J.; Crowley, J. N.

    2013-02-01

    We describe measurements of peroxyacetyl nitrate (CH3C(O)O2NO2, PAN) and peroxyacetic acid (CH3C(O)OOH, PAA) in the Boreal forest using iodide chemical ionization mass spectrometry (ICIMS). The measurements were made during the Hyytiälä United Measurement of Photochemistry and Particles - Comprehensive Organic Particle and Environmental Chemistry (HUMPPA-COPEC-2010) measurement intensive. Mixing ratios of PAN and PAA were determined by measuring the acetate ion signal (CH3C(O)O-, m/z = 59) resulting from reaction of CH3C(O)O2 (from the thermal dissociation of PAN) or CH3C(O)OOH with iodide ions using alternatively heated and ambient temperature inlet lines. During some periods of high temperature (~ 30 °C) and low NOx (< 1 ppbv), PAA mixing ratios were similar to, or exceeded those of PAN and thus contributed a significant fraction of the total acetate signal. PAA is thus a potential interference for ICIMS measurements of PAN, and especially eddy covariance flux measurements in environments where the PAA flux is likely to be a significant proportion of the (short timescale) acetate ion variability. Within the range of mixing ratios of NOx measured during HUMPPA-COPEC, the modelled ratio of PAA-to-PAN was found to be sensitive to temperature (through the thermal decomposition rate of PAN) and the HO2 mixing ratio, thus providing some constraint to estimates of photochemical activity and oxidation rates in the Boreal environment.

  7. Peroxyacetyl nitrate (PAN) and peroxyacetic acid (PAA) measurements by iodide chemical ionisation mass spectrometry: first analysis of results in the boreal forest and implications for the measurement of PAN fluxes

    NASA Astrophysics Data System (ADS)

    Phillips, G. J.; Pouvesle, N.; Thieser, J.; Schuster, G.; Axinte, R.; Fischer, H.; Williams, J.; Lelieveld, J.; Crowley, J. N.

    2012-08-01

    We describe measurements of peroxyacetyl nitrate (CH3C(O)O2NO2, PAN) and peroxyacetic acid (CH3C(O)OOH, PAA) in the Boreal forest using iodide chemical ionization mass spectrometry (ICIMS). The measurements were made during the Hyytiälä United Measurement of Photochemistry and Particles - Comprehensive Organic Particle and Environmental Chemistry (HUMPPA-COPEC-2010) measurement intensive. Mixing ratios of PAN and PAA were determined by measuring the acetate ion signal (CH3C(O)O2-, m/z 59) resulting from reaction of CH3C(O)O2 (from the thermal dissociation of PAN) or CH3C(O)OOH with iodide ions using alternatively heated and ambient temperature inlet lines. During conditions of high temperature and low NOx, PAA mixing ratios were similar to, or exceeded those of PAN and thus contributed a significant fraction of the total acetate signal. PAA is thus a potential interference for ICIMS measurements of PAN, and especially eddy covariance flux measurements in environments where the PAA flux is likely to be a significant proportion of the short timescale acetate ion variability. Within the range of mixing ratios of NOx measured during HUMPPA-COPEC, the ratio of PAA-to-PAN was found to be sensitive to temperature (through the thermal decomposition rate of PAN) and the HO2 mixing ratio, thus providing some constraint to estimates of photochemical activity and oxidation rates in the Boreal environment.

  8. Innovative uses of GigaPan Technology for Onsite and Distance Education

    NASA Astrophysics Data System (ADS)

    Bentley, C.; Schott, R. C.; Piatek, J. L.; Richards, B.

    2013-12-01

    GigaPans are gigapixel panoramic images that can be viewed at a wide range of magnifications, allowing users to explore them in various degrees of detail from the smallest scale to the full image extent. In addition to panoramic images captured with the GigaPan camera mount ('Dry Falls' - http://www.gigapan.com/gigapans/89093), users can also upload annotated images (For example, 'Massanutten sandstone slab with trace fossils (annotated)', http://www.gigapan.com/gigapans/124295) and satellite images (For example, 'Geology vs. Topography - State of Connecticut', http://www.gigapan.com/gigapans/111265). Panoramas with similar topics have been gathered together on the site in galleries, both user-generated and site-curated (For example, http://www.gigapan.com/galleries?categories=geology&page=1). Further innovations in display technology have also led to the development of improved viewers (for example, the annotations in the image linked above can be explored via paired viewers at http://coursecontent.nic.edu/bdrichards/gigapixelimages/callanview) GigaPan panoramas can be created through use of the GigaPan robotic camera mount and a digital camera (different models of the camera mount are available and work with a wide range of cameras). The camera mount can be used to create high-resolution pans ranging in scale from hand sample to outcrop up to landscape via the stitching software included with the robotic mount. The software can also be used to generate GigaPan images from other sources, such as thin section or satellite images, so these images can also be viewed with the online viewer. GigaPan images are typically viewed via a web-based interface that allows the user to interact with the image from the limits of the image detail up to the full panorama. After uploading, information can be added to panoramas with both text captions and geo-referencing (geo-located panoramas can then be viewed in Google Earth). Users can record specific locations and zoom levels in

  9. PanDA Pilot Submission using Condor-G: Experience and Improvements

    NASA Astrophysics Data System (ADS)

    Zhao, Xin; Hover, John; Wlodek, Tomasz; Wenaus, Torre; Frey, Jaime; Tannenbaum, Todd; Livny, Miron; ATLAS Collaboration

    2011-12-01

    PanDA (Production and Distributed Analysis) is the workload management system of the ATLAS experiment, used to run managed production and user analysis jobs on the grid. As a late-binding, pilot-based system, the maintenance of a smooth and steady stream of pilot jobs to all grid sites is critical for PanDA operation. The ATLAS Computing Facility (ACF) at BNL, as the ATLAS Tier1 center in the US, operates the pilot submission systems for the US. This is done using the PanDA "AutoPilot" scheduler component which submits pilot jobs via Condor-G, a grid job scheduling system developed at the University of Wisconsin-Madison. In this paper, we discuss the operation and performance of the Condor-G pilot submission at BNL, with emphasis on the challenges and issues encountered in the real grid production environment. With the close collaboration of Condor and PanDA teams, the scalability and stability of the overall system has been greatly improved over the last year. We review improvements made to Condor-G resulting from this collaboration, including isolation of site-based issues by running a separate Gridmanager for each remote site, introduction of the 'Nonessential' job attribute to allow Condor to optimize its behavior for the specific character of pilot jobs, better understanding and handling of the Gridmonitor process, as well as better scheduling in the PanDA pilot scheduler component. We will also cover the monitoring of the health of the system.

  10. PanDA Pilot Submission using Condor-G: Experience and Improvements

    SciTech Connect

    Zhao X.; Hover John; Wlodek Tomasz; Wenaus Torre; Frey Jaime; Tannenbaum Todd; Livny Miron

    2011-01-01

    PanDA (Production and Distributed Analysis) is the workload management system of the ATLAS experiment, used to run managed production and user analysis jobs on the grid. As a late-binding, pilot-based system, the maintenance of a smooth and steady stream of pilot jobs to all grid sites is critical for PanDA operation. The ATLAS Computing Facility (ACF) at BNL, as the ATLAS Tier1 center in the US, operates the pilot submission systems for the US. This is done using the PanDA 'AutoPilot' scheduler component which submits pilot jobs via Condor-G, a grid job scheduling system developed at the University of Wisconsin-Madison. In this paper, we discuss the operation and performance of the Condor-G pilot submission at BNL, with emphasis on the challenges and issues encountered in the real grid production environment. With the close collaboration of Condor and PanDA teams, the scalability and stability of the overall system has been greatly improved over the last year. We review improvements made to Condor-G resulting from this collaboration, including isolation of site-based issues by running a separate Gridmanager for each remote site, introduction of the 'Nonessential' job attribute to allow Condor to optimize its behavior for the specific character of pilot jobs, better understanding and handling of the Gridmonitor process, as well as better scheduling in the PanDA pilot scheduler component. We will also cover the monitoring of the health of the system.

  11. An Investigation of Electrochemomechanical Actuation of Conductive Polyacrylonitrile (PAN) Nanofiber Composites

    NASA Astrophysics Data System (ADS)

    Gonzalez, Mark A.

    A polymer-based nanofiber composite actuator designed for linear actuation was fabricated by electrospinning, actuated by electrolysis, and characterized by electrical and mechanical testing to address performance limitations and understand the activation processing effects on actuation performance. Currently, Electroactive polymers (EAPs) have provided uses in sensory and actuation technology, but have either low force output or expand rather than contract, falling short in capturing the natural motion and function of muscle desperately needed to provide breakthroughs in the bio-medical and robotic fields. Previous research has shown activated Polyacrylonitrile (PAN) fibers having biomimetic functionalities similar to the sarcomere contraction responsible for muscle function. Activated PAN is also known to contract and expand by electrolysis when in close vicinity to the anode and cathode, respectively. PAN nanofibers especially show faster response to changes in environmental pH and improved mechanical properties over larger diameter fibers. Conductive additives were introduced to the electrospinning solution and activated in an attempt to create composite PAN nanofiber gel actuators with improved conductivity and eliminate the need of stiff electrodes. Tensile testing was conducted to examine changes in mechanical properties between annealing and hydrolysis processing. Introducing conductive additives did not show a significant increase in conductivity and created unusable samples, requiring alternative electrode materials. Electrochemical contraction rates up to 25%/ min were achieved. Strains of 58.8%, ultimate stresses up to 77.1 MPa, and moduli of 0.21 MPa were achieved with pure PAN nanofiber mats, surpassing mechanical properties of natural muscles. Improvements to contraction rates and young's moduli are necessary to capture the function and performance of skeletal muscles properly.

  12. Ab initio studies of isomerization and dissociation reactions of peroxyacetyl nitrate (PAN)

    NASA Astrophysics Data System (ADS)

    Wei, Wen-Mei; Tan, Wei; Zheng, Ren-Hui; He, Tian-Jing; Chen, Dong-Ming; Liu, Fan-Chen

    2005-06-01

    The complex potential energy surface for the unimolecular isomerization and decomposition of peroxyacetyl nitrate (PAN, CH3C(O)OONO2), including 11 isomers, 45 interconversion transition states and 18 major dissociation products, is probed theoretically at the G2MP2//B3LYP/6-311G(2d,2p) level of theory. The geometries and relative energies for various stationary points are determined. Based on the calculated G2MP2 potential energy surface, the possible unimolecular decomposition mechanism of PAN is proposed. It is shown that the most feasible decomposition channels of PAN are those leading to 2CH3C(O)OO + NO2, 2CH3C(O)O + 2NO3, and 2CH3 + CO2 + 2NO3, respectively. Among them, the formations of the products of the first two channels are produced by the homolytic O-N and O-O bond ruptures of PAN with the bond dissociation energies of 32.3 and 33.9 kcal/mol, respectively, while the last one is initiated by the concerted C-C and O-O bond fissions via a barrier of 36.5 kcal/mol. Our results suggest that besides the first two decomposition pathways which have been reported by the literature, the last concerted bond fission dissociation channel via a well-defined transition state is also feasible, which has been confirmed by using CBS-Q and CBS-QB3 methods. Therefore, PAN dissociation occurs mainly via the homolytic O-N or O-O bond ruptures or via the concerted C-C and O-O bond fissions while the first channel is more favorable than the last two channels.

  13. Demographic History of the Genus Pan Inferred from Whole Mitochondrial Genome Reconstructions

    PubMed Central

    Tucci, Serena; de Manuel, Marc; Ghirotto, Silvia; Benazzo, Andrea; Prado-Martinez, Javier; Lorente-Galdos, Belen; Nam, Kiwoong; Dabad, Marc; Hernandez-Rodriguez, Jessica; Comas, David; Navarro, Arcadi; Schierup, Mikkel H.; Andres, Aida M.; Barbujani, Guido; Hvilsom, Christina; Marques-Bonet, Tomas

    2016-01-01

    The genus Pan is the closest genus to our own and it includes two species, Pan paniscus (bonobos) and Pan troglodytes (chimpanzees). The later is constituted by four subspecies, all highly endangered. The study of the Pan genera has been incessantly complicated by the intricate relationship among subspecies and the statistical limitations imposed by the reduced number of samples or genomic markers analyzed. Here, we present a new method to reconstruct complete mitochondrial genomes (mitogenomes) from whole genome shotgun (WGS) datasets, mtArchitect, showing that its reconstructions are highly accurate and consistent with long-range PCR mitogenomes. We used this approach to build the mitochondrial genomes of 20 newly sequenced samples which, together with available genomes, allowed us to analyze the hitherto most complete Pan mitochondrial genome dataset including 156 chimpanzee and 44 bonobo individuals, with a proportional contribution from all chimpanzee subspecies. We estimated the separation time between chimpanzees and bonobos around 1.15 million years ago (Mya) [0.81–1.49]. Further, we found that under the most probable genealogical model the two clades of chimpanzees, Western + Nigeria-Cameroon and Central + Eastern, separated at 0.59 Mya [0.41–0.78] with further internal separations at 0.32 Mya [0.22–0.43] and 0.16 Mya [0.17–0.34], respectively. Finally, for a subset of our samples, we compared nuclear versus mitochondrial genomes and we found that chimpanzee subspecies have different patterns of nuclear and mitochondrial diversity, which could be a result of either processes affecting the mitochondrial genome, such as hitchhiking or background selection, or a result of population dynamics. PMID:27345955

  14. Demographic History of the Genus Pan Inferred from Whole Mitochondrial Genome Reconstructions.

    PubMed

    Lobon, Irene; Tucci, Serena; de Manuel, Marc; Ghirotto, Silvia; Benazzo, Andrea; Prado-Martinez, Javier; Lorente-Galdos, Belen; Nam, Kiwoong; Dabad, Marc; Hernandez-Rodriguez, Jessica; Comas, David; Navarro, Arcadi; Schierup, Mikkel H; Andres, Aida M; Barbujani, Guido; Hvilsom, Christina; Marques-Bonet, Tomas

    2016-07-03

    The genus Pan is the closest genus to our own and it includes two species, Pan paniscus (bonobos) and Pan troglodytes (chimpanzees). The later is constituted by four subspecies, all highly endangered. The study of the Pan genera has been incessantly complicated by the intricate relationship among subspecies and the statistical limitations imposed by the reduced number of samples or genomic markers analyzed. Here, we present a new method to reconstruct complete mitochondrial genomes (mitogenomes) from whole genome shotgun (WGS) datasets, mtArchitect, showing that its reconstructions are highly accurate and consistent with long-range PCR mitogenomes. We used this approach to build the mitochondrial genomes of 20 newly sequenced samples which, together with available genomes, allowed us to analyze the hitherto most complete Pan mitochondrial genome dataset including 156 chimpanzee and 44 bonobo individuals, with a proportional contribution from all chimpanzee subspecies. We estimated the separation time between chimpanzees and bonobos around 1.15 million years ago (Mya) [0.81-1.49]. Further, we found that under the most probable genealogical model the two clades of chimpanzees, Western + Nigeria-Cameroon and Central + Eastern, separated at 0.59 Mya [0.41-0.78] with further internal separations at 0.32 Mya [0.22-0.43] and 0.16 Mya [0.17-0.34], respectively. Finally, for a subset of our samples, we compared nuclear versus mitochondrial genomes and we found that chimpanzee subspecies have different patterns of nuclear and mitochondrial diversity, which could be a result of either processes affecting the mitochondrial genome, such as hitchhiking or background selection, or a result of population dynamics.

  15. The felsic magmatic province in East Gondwana: implications for Pan-African tectonics

    NASA Astrophysics Data System (ADS)

    Rajesh, H. M.; Santosh, M.; Yoshida, M.

    The East Gondwana crustal fragments, namely southern India, Sri Lanka, Madagascar, East Antarctica and Western Australia, preserve evidence for a prominent Pan-African felsic magmatic event represented by feldspathoidal syenites, alkali granites and syenites emplaced proximal to fault lineaments. In Peninsular India, late or post-kinematic alkaline plutons ranging in age from 864 to 600 Ma characterize the Eastern Ghats belt, whereas a strong Pan-African imprint is provided by 550-750 Ma alkali granites and syenites in the southern granulite segment. In Sri Lanka, alkali granites occur in all major geologic units, with radiometric ages in the range of 550-760 Ma. In Madagascar, alkali granites and syenites with late Proterozoic to Palaeozoic ages are reported. Felsic magmatic activity in East Antarctica is characterized by post-tectonic granitic and syenitic plutons in Enderby Land and Queen Maud Land, showing an age range of 550-770 Ma. Pan-African felsic plutons in Western Australia define ages of 550-570 Ma. This paper summarizes the petrologic, geochemical and geochronologic characteristics of felsic plutons in the various East Gondwana fragments. Many of the intrusives represent anorogenic A-type magmas generated in rift-related environments of high heat flow and abundant volatile activity, correlative with an extensional tectonic regime and probably including melts generated from both upper mantle and lower crustal sources. This paper identifies a major Pan-African felsic magmatic province in East Gondwana, which, in association with their petrogenetic significance, is considered to be suggestive of a geodynamic signature of East Gondwana during the Pan-African period.

  16. PAN-811 Blocks Chemotherapy Drug-Induced In Vitro Neurotoxicity, While Not Affecting Suppression of Cancer Cell Growth.

    PubMed

    Jiang, Zhi-Gang; Fuller, Steven A; Ghanbari, Hossein A

    2016-01-01

    Chemotherapy often results in cognitive impairment, and no neuroprotective drug is now available. This study aimed to understand underlying neurotoxicological mechanisms of anticancer drugs and to evaluate neuroprotective effects of PAN-811. Primary neurons in different concentrations of antioxidants (AOs) were insulted for 3 days with methotrexate (MTX), 5-fluorouracil (5-FU), or cisplatin (CDDP) in the absence or presence of PAN-811·Cl·H2O. The effect of PAN-811 on the anticancer activity of tested drugs was also examined using mouse and human cancer cells (BNLT3 and H460) to assess any negative interference. Cell membrane integrity, survival, and death and intramitochondrial reactive oxygen species (ROS) were measured. All tested anticancer drugs elicited neurotoxicity only under low levels of AO and elicited a ROS increase. These results suggested that ROS mediates neurotoxicity of tested anticancer drugs. PAN-811 dose-dependently suppressed increased ROS and blocked the neurotoxicity when neurons were insulted with a tested anticancer drug. PAN-811 did not interfere with anticancer activity of anticancer drugs against BNLT3 cells. PAN-811 did not inhibit MTX-induced death of H460 cells but, interestingly, demonstrated a synergistic effect with 5-FU or CDDP in reducing cancer cell viability. Thus, PAN-811 can be a potent drug candidate for chemotherapy-induced cognitive impairment.

  17. Peroxyacetyl Nitrate (PAN) as an indicator of long range transport of air pollutants over the marine environment

    NASA Astrophysics Data System (ADS)

    Lee, M.; Han, J.; Lee, G.; Choi, H.

    2011-12-01

    Peroxyacetyl Nitrate (PAN) was measured at Gosan ABC Superstation, Korea during 19 October ~ 6 November 2010. PAN and NO2 were separated onto a GC column and then quantified by luminol chemiluminescence at 425 nm every 2 minutes. PAN concentrations ranged from 0.2 ppbv to 2.4 ppbv with an average of 0.6 ppbv. The highest PAN concentrations were observed during the two haze events, when stagnant condition developed over the Yellow Sea. Particularly, PAN was surprisingly well correlated with PM10 for the whole experiment period (r = 0.88) (Fig. 1). The PM10 concentration was raised up to 216 μg/m3 during the second event. In addition, PAN concentrations were noticeably enhanced when air masses passed over the populated or industrialized areas in China or Korea and aged over the Sea, which were identified by backward air mass trajectories. In this study, PAN was suggested to be a good indicator of the long range transport of air pollutants.

  18. The measurement of Peroxyacetyl nitrate (PAN) in the regional background marine boundary air, Baengyeong Island, South Korea

    NASA Astrophysics Data System (ADS)

    Lee, G.; Choi, H.; Lee, T.; Lee, D.; Park, J.; Jang, S.

    2010-12-01

    Concurrent measurements of Peroxyacetyl nitrate (PAN), other photochemically reactive species including O3, CO, NO, NOy, selected species of non-methane hydrocarbons (NMHCs), and aerosol chemical (water soluble ionic species, OC/EC, trace metals) compositions were made in an atmospheric monitoring station in Baengyeong Island from Aug. 2nd to 14th of 2010. This island is located at the far western part of Korea in the middle of Yellow Sea between China and Korea. PAN was determined every 3 minutes by a fast chromatograph with luminol-based chemiluminescence detection. Mixing ratios of PAN ranged from the below the detection limit of 0.005 to 1.04 ppb with an average of 0.09 ppb. Over the same period, hourly averaged O3 ranged from 0 to 63 ppb (average of 32 ppb). Although our measurements were made over the relatively clean marine boundary air, significant and rapid increases of PAN were frequently observed. These increases of PAN were coincided with increases of its precursors and wind pattern changes. After detailed analysis of aerosol compositions using local wind variation, back-trajectory and synoptic analysis of air masses, the degree of influences and chemistry related with PAN from surrounding land areas, China, South Korea and North Korea will be identified. Also, the role of PAN and other reactive nitrogen species to ozone formation and its transport over the Yellow Sea are planned to be addressed.

  19. Gerhart Panning (1900-1944): a German forensic pathologist and his involvement in Nazi crimes during Second World War.

    PubMed

    Preuss, Johanna; Madea, Burkhard

    2009-03-01

    Twenty years after the Second World War the public were made aware of War Crimes committed by the German forensic pathologist, Gerhart Panning (1900-1944). From 1942 till 1944, Panning was professor at the Institute of Forensic Medicine at the University of Bonn. Panning died of tuberculosis on 22 March 1944. After the Second World War, Panning's widow tried to obtain denazification for her husband. There were no particularly serious doubts. In 1965, Konrad Graf von Moltke, the son of Helmuth James Graf von Moltke (1907-1944), presented to the court a private letter from his father to his mother. In this letter, written in 1941, Panning's experiments on Soviet prisoners are described. In the so-called Callsen trial in the court of Darmstadt from 1960 to 1968, the experiments were confirmed by witnesses. In 1941, Panning performed experiments in cooperation with the Sicherheitsstaffel (Nazi special police) in the Ukraine to prove that captured ammunition of the soviet infantry violated international law. For this purpose, different parts of the bodies of living Soviets were used as firing targets. He published the results of these experiments in a scientific journal without any evidence of the origin of these observations. In this article, Panning's life and crimes have been described.

  20. The basement of the Punta del Este Terrane (Uruguay): an African Mesoproterozoic fragment at the eastern border of the South American Río de La Plata craton

    NASA Astrophysics Data System (ADS)

    Basei, Miguel A. S.; Peel, Elena; Sánchez Bettucci, Leda; Preciozzi, Fernando; Nutman, Allen P.

    2011-04-01

    The Punta del Este Terrane (eastern Uruguay) lies in a complex Neoproterozoic (Brasiliano/Pan-African) orogenic zone considered to contain a suture between South American terranes to the west of Major Gercino-Sierra Ballena Suture Zone and eastern African affinities terranes. Zircon cores from Punta del Este Terrane basement orthogneisses have U-Pb ages of ca. 1,000 Ma, which indicate an lineage with the Namaqua Belt in Southwestern Africa. U-Pb zircon ages also provide the following information on the Punta del Este terrane: the orthogneisses containing the ca. 1,000 Ma inheritance formed at ca. 750 Ma; in contrast to the related terranes now in Africa, reworking of the Punta del Este Terrane during Brasiliano/Pan-African orogenesis was very intense, reaching granulite facies at ca. 640 Ma. The termination of the Brasiliano/Pan-African orogeny is marked by formation of acid volcanic and volcanoclastic rocks at ca. 570 Ma (Sierra de Aguirre Formation), formation of late sedimentary basins (San Carlos Formation) and then intrusion at ca. 535 Ma of post-tectonic granitoids (Santa Teresa and José Ignacio batholiths). The Punta del Este Terrane and unrelated western terranes represented by the Dom Feliciano Belt and the Río de La Plata Craton were in their present positions by ca. 535 Ma.

  1. Transport of PAN and NOy from different source regions to the Swiss high alpine site Jungfraujoch

    NASA Astrophysics Data System (ADS)

    Pandey Deolal, Shubha; Staehelin, Johannes; Brunner, Dominik; Cui, Junbo; Steinbacher, Martin; Zellweger, Christoph; Henne, Stephan; Vollmer, Martin K.

    2013-01-01

    The effect of intercontinental transport on measurements of nitrogen oxides (NOx), peroxyacetyl nitrate (PAN) and reactive nitrogen species (NOy) at the high altitude site Jungfraujoch (3580 m asl), Switzerland, was evaluated using a combination of backward trajectories and chemical filters (NOy to carbon monoxide (CO) ratio). Mixing ratios associated with air masses transported from the planetary boundary layers (PBL) of the three continental source regions Europe, North America, and Asia, and of free tropospheric origin were characterized. The analysis was applied to PAN, NOx and NOy measurements of the period 1997-1998, and to a period more than 10 years later covering several months in 2008 and 2009-2010. The results show that the mixing ratios of PAN, NOx and NOy are largest in air advected from the European PBL. In contrast to previous studies, our results indicate that the springtime maximum in PAN and NOy mixing ratios is largely attributable to air originating from the European PBL whereas air of free tropospheric origin and intercontinental transport contribute less significantly. PAN and NOy mixing ratios in air masses classified as free tropospheric are also highest in spring but substantially lower than those influenced by European PBL air. Air masses last influenced by the North American source region show considerably lower mixing ratios of nitrogen species than European air masses suggesting that a large fraction of NOy is removed during intercontinental transport probably due to washout of soluble species such as HNO3. The seasonal contributions from different source regions to PAN mixing ratios at Jungfraujoch were evaluated. The average European contribution is highest during the warm seasons with 47-57% in 1997-1998 and 61-69% in 2009-2010. The maximum contribution of North American air masses is also observed in the warm season and was about 5-7% in 1997-1998 and 6-10% in 2009-2010. Air from Asian source regions did not make a significant

  2. PANS - A Detailed Study of the Patients, Their Symptoms, Biomarkers and Treatment Offered in a Scandinavian Cohort

    ClinicalTrials.gov

    2016-07-04

    Obsessive-compulsive Disorder With Acute Onset; PANDAS; Pediatric Autoimmune Neuropsychiatric Disorders Associated With Streptococcal Infections; Pediatric Acute-onset Neuropsychiatric Syndrome (PANS); Childhood Acute Neuropsychiatric Symptoms (CANS); Obsessive-compulsive Disorder

  3. An integrative and comparative study of pan-cancer transcriptomes reveals distinct cancer common and specific signatures

    PubMed Central

    Cao, Zhen; Zhang, Shihua

    2016-01-01

    To investigate the commonalities and specificities across tumor lineages, we perform a systematic pan-cancer transcriptomic study across 6744 specimens. We find six pan-cancer subnetwork signatures which relate to cell cycle, immune response, Sp1 regulation, collagen, muscle system and angiogenesis. Moreover, four pan-cancer subnetwork signatures demonstrate strong prognostic potential. We also characterize 16 cancer type-specific subnetwork signatures which show diverse implications to somatic mutations, somatic copy number aberrations, DNA methylation alterations and clinical outcomes. Furthermore, some of them are strongly correlated with histological or molecular subtypes, indicating their implications with tumor heterogeneity. In summary, we systematically explore the pan-cancer common and cancer type-specific gene subnetwork signatures across multiple cancers, and reveal distinct commonalities and specificities among cancers at transcriptomic level. PMID:27633916

  4. Genome Sequence of a Central Chimpanzee-Associated Polyomavirus Related to BK and JC Polyomaviruses, Pan troglodytes troglodytes Polyomavirus 1.

    PubMed

    Madinda, Nadège F; Robbins, Martha M; Boesch, Christophe; Leendertz, Fabian H; Ehlers, Bernhard; Calvignac-Spencer, Sébastien

    2015-09-03

    We amplified and sequenced the genome of a polyomavirus infecting a central chimpanzee (Pan troglodytes troglodytes). This virus, which is closely related to BK and JC polyomaviruses, may help shed a new light on these human pathogens' evolutionary history.

  5. Development of noSQL data storage for the ATLAS PanDA Monitoring System

    NASA Astrophysics Data System (ADS)

    Potekhin, M.; ATLAS Collaboration

    2012-06-01

    For several years the PanDA Workload Management System has been the basis for distributed production and analysis for the ATLAS experiment at the LHC. Since the start of data taking PanDA usage has ramped up steadily, typically exceeding 500k completed jobs/day by June 2011. The associated monitoring data volume has been rising as well, to levels that present a new set of challenges in the areas of database scalability and monitoring system performance and efficiency. These challenges are being met with a R&D effort aimed at implementing a scalable and efficient monitoring data storage based on a noSQL solution (Cassandra). We present our motivations for using this technology, as well as data design and the techniques used for efficient indexing of the data. We also discuss the hardware requirements as they were determined by testing with actual data and realistic loads.

  6. Evolution of drug reimbursement in Canada: the Pan-Canadian Pharmaceutical Alliance for new drugs.

    PubMed

    Husereau, Don; Dempster, William; Blanchard, Adrienne; Chambers, Johanne

    2014-12-01

    Canada has a unique system of public drug coverage and reimbursement characterized by a centralized review agency that makes funding recommendations along with decentralized authority for delivering health care across 10 provinces and three territories. There has been a significant increase in price negotiation for new pharmaceuticals in the past 10 years, first by individual provinces and now through a collective price negotiation process called the "Pan-Canadian Pharmaceutical Alliance." As of February 2014, the Pan-Canadian Pharmaceutical Alliance has already completed 32 negotiations despite still being in a formative stage; it is anticipated that a formal process will be developed in the coming year. In this article, we describe the evolution of price negotiation in Canada and identify several opportunities for improvement of the current process, including the incorporation of economic considerations into price negotiation.

  7. Strengthened PAN-based carbon fibers obtained by slow heating rate carbonization

    PubMed Central

    Kim, Min-A; Jang, Dawon; Tejima, Syogo; Cruz-Silva, Rodolfo; Joh, Han-Ik; Kim, Hwan Chul; Lee, Sungho; Endo, Morinobu

    2016-01-01

    Large efforts have been made over the last 40 years to increase the mechanical strength of polyacrylonitrile (PAN)-based carbon fibers (CFs) using a variety of chemical or physical protocols. In this paper, we report a new method to increase CFs mechanical strength using a slow heating rate during the carbonization process. This new approach increases both the carbon sp3 bonding and the number of nitrogen atoms with quaternary bonding in the hexagonal carbon network. Theoretical calculations support a crosslinking model promoted by the interstitial carbon atoms located in the graphitic interlayer spaces. The improvement in mechanical performance by a controlled crosslinking between the carbon hexagonal layers of the PAN based CFs is a new concept that can contribute further in the tailoring of CFs performance based on the understanding of their microstructure down to the atomic scale. PMID:27004752

  8. Publishing datasets with eSciDoc and panMetaDocs

    NASA Astrophysics Data System (ADS)

    Ulbricht, D.; Klump, J.; Bertelmann, R.

    2012-04-01

    Currently serveral research institutions worldwide undertake considerable efforts to have their scientific datasets published and to syndicate them to data portals as extensively described objects identified by a persistent identifier. This is done to foster the reuse of data, to make scientific work more transparent, and to create a citable entity that can be referenced unambigously in written publications. GFZ Potsdam established a publishing workflow for file based research datasets. Key software components are an eSciDoc infrastructure [1] and multiple instances of the data curation tool panMetaDocs [2]. The eSciDoc repository holds data objects and their associated metadata in container objects, called eSciDoc items. A key metadata element in this context is the publication status of the referenced data set. PanMetaDocs, which is based on PanMetaWorks [3], is a PHP based web application that allows to describe data with any XML-based metadata schema. The metadata fields can be filled with static or dynamic content to reduce the number of fields that require manual entries to a minimum and make use of contextual information in a project setting. Access rights can be applied to set visibility of datasets to other project members and allow collaboration on and notifying about datasets (RSS) and interaction with the internal messaging system, that was inherited from panMetaWorks. When a dataset is to be published, panMetaDocs allows to change the publication status of the eSciDoc item from status "private" to "submitted" and prepare the dataset for verification by an external reviewer. After quality checks, the item publication status can be changed to "published". This makes the data and metadata available through the internet worldwide. PanMetaDocs is developed as an eSciDoc application. It is an easy to use graphical user interface to eSciDoc items, their data and metadata. It is also an application supporting a DOI publication agent during the process of

  9. Characterization of proton conducting blend polymer electrolyte using PVA-PAN doped with NH4SCN

    NASA Astrophysics Data System (ADS)

    Premalatha, M.; Mathavan, T.; Selvasekarapandian, S.; Genova, F. Kingslin Mary; Umamaheswari, R.

    2016-05-01

    Polymer electrolytes with proton conductivity based on blend polymer using polyvinyl alcohol (PVA) and poly acrylo nitrile (PAN) doped with ammonium thiocyanate have been prepared by solution casting method using DMF as solvent. The complex formation between the blend polymer and the salt has been confirmed by FTIR Spectroscopy. The amorphous nature of the blend polymer electrolytes have been confirmed by XRD analysis. The highest conductivity at 303 K has been found to be 3.25 × 10-3 S cm-1 for 20 mol % NH4SCN doped 92.5PVA:7.5PAN system. The increase in conductivity of the doped blend polymer electrolytes with increasing temperature suggests the Arrhenius type thermally activated process. The activation energy is found to be low (0.066 eV) for the highest conductivity sample.

  10. IOTA: the array controller for a gigapixel OTCCD camera for Pan-STARRS

    NASA Astrophysics Data System (ADS)

    Onaka, Peter; Tonry, John; Luppino, Gerard; Lockhart, Charles; Lee, Aaron; Ching, Gregory; Isani, Sidik; Uyeshiro, Robin

    2004-09-01

    The PanSTARRS project has undertaken an ambitious effort to develop a completely new array controller architecture that is fundamentally driven by the large 1gigapixel, low noise, high speed OTCCD mosaic requirements as well as the size, power and weight restrictions of the PanSTARRS telescope. The result is a very small form factor next generation controller scalar building block with 1 Gigabit Ethernet interfaces that will be assembled into a system that will readout 512 outputs at ~1 Megapixel sample rates on each output. The paper will also discuss critical technology and fabrication techniques such as greater than 1MHz analog to digital converters (ADCs), multiple fast sampling and digital calculation of multiple correlated samples (DMCS), ball grid array (BGA) packaged circuits, LINUX running on embedded field programmable gate arrays (FPGAs) with hard core microprocessors for the prototype currently being developed.

  11. Strengthened PAN-based carbon fibers obtained by slow heating rate carbonization.

    PubMed

    Kim, Min-A; Jang, Dawon; Tejima, Syogo; Cruz-Silva, Rodolfo; Joh, Han-Ik; Kim, Hwan Chul; Lee, Sungho; Endo, Morinobu

    2016-03-23

    Large efforts have been made over the last 40 years to increase the mechanical strength of polyacrylonitrile (PAN)-based carbon fibers (CFs) using a variety of chemical or physical protocols. In this paper, we report a new method to increase CFs mechanical strength using a slow heating rate during the carbonization process. This new approach increases both the carbon sp(3) bonding and the number of nitrogen atoms with quaternary bonding in the hexagonal carbon network. Theoretical calculations support a crosslinking model promoted by the interstitial carbon atoms located in the graphitic interlayer spaces. The improvement in mechanical performance by a controlled crosslinking between the carbon hexagonal layers of the PAN based CFs is a new concept that can contribute further in the tailoring of CFs performance based on the understanding of their microstructure down to the atomic scale.

  12. Pan Eurasian EXperiment (PEEX) - towards a new multinational environment and climate research effort in Eurasia

    NASA Astrophysics Data System (ADS)

    Petäjä, Tuukka; Kulmala, Markku; Lappalainen, Hanna; Sipilä, Mikko; Sorvari, Sanna; Alekseychik, Pavel; Paramonov, Mikhail; Kerminen, Veli-Matti; Zilitinkevich, Sergej

    2013-04-01

    Boreal forests are a substantial source of greenhouse gases, biogenic volatile organic compounds (BVOCs) and natural aerosols, the critical atmospheric components related to climate change processes. A large fraction of boreal forests of the world is situated in Siberian region. Representative measurements of carbon dioxide (CO2) and methane (CH4) concentrations, BVOC emissions and aerosols production from Siberian are of special importance when estimating global budgets of climate change relevant factors. The scope of a new concept of the Pan Eurasian Experiment (PEEX) is to set up a process for planning of a large-scale, long-term, coordinated observations and modeling experiment in the Pan Eurasian region, especially to cover ground base, airborne and satellite observations together with global and regional models to find out different forcing and feedback mechanisms in the changing climate. University of Helsinki together with Finnish Meteorological institute are organizing the Pan-Eurasian Experiment and to gather all the European and Russian key players in the field of climate and Earth system science to plan the future research activities in the Pan-Eurasian region. In the European scale PEEX is part of the JPI Climate Fast Track Activity 1.3. "Changing cryosphere in the climate system - from observations to climate modeling". PEEX research topics are closely related the NordForsk's Top Research Initiative CRAICC - Cryosphere - atmosphere interaction in the changing Arctic climate. PEEX is also a central part of the ongoing the Finnish Cultural Foundation - Earth System modeling Working Group activity (2012-2013). PEEX scientific aims and future actions to develop Pan Eurasian research infrastructure can be linked to several EC and ESA funded activities aiming to develop next generation research infrastructures and data products: EU-FP7-ACTRIS-I3-project (Aerosols, Clouds, and Trace gases Research InfraStructure Network-project 2011-2015); ICOS a research

  13. Precursor lesions for sporadic pancreatic cancer: PanIN, IPMN, and MCN.

    PubMed

    Distler, M; Aust, D; Weitz, J; Pilarsky, C; Grützmann, Robert

    2014-01-01

    Pancreatic cancer is still a dismal disease. The high mortality rate is mainly caused by the lack of highly sensitive and specific diagnostic tools, and most of the patients are diagnosed in an advanced and incurable stage. Knowledge about precursor lesions for pancreatic cancer has grown significantly over the last decade, and nowadays we know that mainly three lesions (PanIN, and IPMN, MCN) are responsible for the development of pancreatic cancer. The early detection of these lesions is still challenging but provides the chance to cure patients before they might get an invasive pancreatic carcinoma. This paper focuses on PanIN, IPMN, and MCN lesions and reviews the current level of knowledge and clinical measures.

  14. One of a kind--the Pan African Clinical Trials Registry, a regional registry for Africa.

    PubMed

    Abrams, Amber L

    2011-01-01

    The 2004 Ministerial Summit on Health Research called on the World Health Organization to to establish a registry network with the intention of providing a single access point to identify trials. In 2007 the International Committee of Medical Journal Editors amended their support of this initiative stating that only trials registered prospectively on a member registry of the WHO's Network of Primary Registers would be published. The Pan African Clinical Trials Registry (www.pactr.org), was established in early 2007 as the AIDS, TB and Malaria (ATM) Clinical Trials Registry with the aim of piloting the concept of a registry that would cater to the specific needs of African trialists. In 2009 the ATM Registry expanded its remit to include all diseases for all regions of Africa; The Pan African Clinical Trials Registry became the first and is presently the only African member of the World Health Organization's Network of Primary Registers.

  15. Numerical prediction of pressure fluctuations in a prototype pump turbine base on PANS methods

    NASA Astrophysics Data System (ADS)

    Liu, J. T.; Li, Y.; Gao, Y.; Hu, Q.; Wu, Y. L.

    2016-05-01

    Unsteady flow and pressure fluctuations within a prototypel pump turbine are numerically studied using a nonlinear Partial Averaged Navier Stokes (PANS) model. Pump turbine operating at different conditions with guide vanes opening angle 6° is simulated. Results revealed that the predictions of performance and relative peak-to-peak amplitude by PANS approach agree well with the experimental data. The amplitude of the pressure fluctuation in the vaneless space at turbine mode on a “S” curve increases with the decrease of the flow rate, and it has maximum value when it runs close to runaway line at turbine braking mode. The amplitude of the pressure fluctuation in the vaneless space at turbine braking mode on a “S” curve decreases with the reduce of the flow rate. The above high pressure fluctuations should be avoided during the design of pump turbines especially those operating at high-head condition.

  16. All great ape species (Gorilla gorilla, Pan paniscus, Pan troglodytes, Pongo abelii) and two-and-a-half-year-old children (Homo sapiens) discriminate appearance from reality.

    PubMed

    Karg, Katja; Schmelz, Martin; Call, Josep; Tomasello, Michael

    2014-11-01

    Nonhuman great apes and human children were tested for an understanding that appearance does not always correspond to reality. Subjects were 29 great apes (bonobos [Pan paniscus], chimpanzees [Pan troglodytes], gorillas [Gorilla gorilla], and orangutans [Pongo abelii]) and 24 2½-year-old children. In our task, we occluded portions of 1 large and 1 small food stick such that the size relations seemed reversed. Subjects could then choose which one they wanted. There was 1 control condition and 2 experimental conditions (administered within subjects). In the control condition subjects saw only the apparent stick sizes, whereas in the 2 experimental conditions they saw the true stick sizes as well (the difference between them being what the subjects saw first: the apparent or the real stick sizes). All great ape species and children successfully identified the bigger stick, despite its smaller appearance, in the experimental conditions, but not in the control. We discuss these results in relation to the understanding of object permanence and conservation, and exclude reversed reward contingency learning as an explanation.

  17. Discrete quantity judgments in the great apes (Pan paniscus, Pan troglodytes, Gorilla gorilla, Pongo pygmaeus): the effect of presenting whole sets versus item-by-item.

    PubMed

    Hanus, Daniel; Call, Josep

    2007-08-01

    The authors examined quantity-based judgments for up to 10 items for simultaneous and sequential whole sets as well as for sequentially dropped items in chimpanzees (Pan troglodytes), gorillas (Gorilla gorilla), bonobos (Pan paniscus), and orangutans (Pongo pygmaeus). In Experiment 1, subjects had to choose the larger of 2 quantities presented in 2 separate dishes either simultaneously or 1 dish after the other. Representatives of all species were capable of selecting the larger of 2 quantities in both conditions, even when the quantities were large and the numerical distance between them was small. In Experiment 2, subjects had to select between the same food quantities sequentially dropped into 2 opaque cups so that none of the quantities were ever viewed as a whole. The authors found some evidence (albeit weaker) that subjects were able to select the larger quantity of items. Furthermore, the authors found no performance breakdown with the inclusion of certain quantities. Instead, the ratio between quantities was the best performance predictor. The authors conclude that quantity-based judgments rely on an analogical system, not a discrete object file model or perceptual estimation mechanism, such as subitizing.

  18. How did bonobos come to range south of the congo river? Reconsideration of the divergence of Pan paniscus from other Pan populations.

    PubMed

    Takemoto, Hiroyuki; Kawamoto, Yoshi; Furuichi, Takeshi

    2015-01-01

    While investigating the genetic structure in wild bonobos,(1) we realized that the widely accepted scenario positing that the Pleistocene appearance of the Congo River separated the common ancestor of chimpanzees (Pan troglodytes) and bonobos (P. paniscus) into two species is not supported by recent geographical knowledge about the formation of the Congo River. We explored the origin of bonobos using a broader biogeographical perspective by examining local faunas in the central African region. The submarine Congo River sediments and paleotopography of central Africa show that the Congo River has functioned as a geographical barrier for the last 34 million years. This evidence allows us to hypothesize that when the river was first formed, the ancestor of bonobos did not inhabit the current range of the species on the left bank of the Congo River but that, during rare times when the Congo River discharge decreased during the Pleistocene, one or more founder populations of ancestral Pan paniscus crossed the river to its left bank. The proposed scenario for formation of the Congo River and the corridor hypothesis for an ancestral bonobo population is key to understanding the distribution of great apes and their evolution.

  19. In Field Detection of Biologicals in Human Blood Serum, Saliva and Urine Using Pan Coated Quartz Crystals

    DTIC Science & Technology

    1996-10-01

    removed and stored at 40 C for use in assays. 11 inhibit these proteins. Other enzymes, such as a - amylase , are also found in abundance in saliva . This...Detection of Biologicals in Human Blood Serum, Saliva and Urine Using Pan Coated Quartz Crystals PRINCIPAL INVESTIGATOR: Robert Carter CONTRACTING...TITLE AND SUBTITLE In Field Detection of Biologicals in 5. FUNDING NUMBERS Human Blood Serum, Saliva and Urine Using Pan Coated Quartz Crystals

  20. Measurements of peroxyacyl nitrates (PANS) in Mexico City: implications for megacity air quality impacts on regional scales

    NASA Astrophysics Data System (ADS)

    Gaffney, J. S.; Marley, N. A.; Cunningham, M. M.; Doskey, P. V.

    Peroxyacyl nitrates (PANs) were measured using gas chromatography with electron capture detection (GC/ECD) in north central Mexico City during February-March of 1997. Peroxyacetyl nitrate (PAN) was observed to exceed 30 ppb during five days of the study, with peroxypropionyl nitrate (PPN) and peroxybutryl nitrate (PBN) reaching 6 and 1 ppb maximum, respectively. Levels of total PANs typically exceeded 10 ppb during the period of measurement and showed a very strong diurnal variation with PANs maximum during the early afternoon and falling to less than 0.1 ppb during the evening hours. These levels of PANs are the highest reported values in North America (and the world) for an urban center, since levels of approximately 30 ppb were reported during the late 1970s in the Los Angeles area (South Coast Air Basin, Tuazon et al., 1978). Hydrocarbon measurements indicate that the levels of olefins, specifically butenes are significant in Mexico City. A time series taken of source indicator hydrocarbons taken before and during a Mexican National Holiday with reduced automobile traffic clearly show that mobile sources of butenes are as important as liquefied petroleum gas. Observations of 10-40 ppb C methyl- t-butyl ether (MTBE) are consistent with MTBE/gasoline fuel usage as a source of isobutene and formaldehyde. Both these reactive species can lead to increased oxidant and PAN formation. The strong diurnal profiles of PANs are consistent with regional clearing of the Mexico City air basin on a daily basis. Estimates are given using a simple box model calculation for a number of key primary and secondary pollutant emissions from this megacity on an annual basis. These calculations indicate that megacities can be important sources of both primary and secondary pollutants, and that PANs produced in megacity environments are likely to contribute strongly to regional scale ozone and aerosol productions during long range transport.